Citrus Sinensis ID: 001617

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040----

METGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPHAG

cccccccccccEEEEEccccccHHHHcccccEEEEEccccEEEEccccccccEEcccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEEEEEEEEccccccccccccccccccccccccccccccccccEEEccccccEEEccccEEEcccHHHHHHHHHHccccccHHcccccccccccccEEEEEEEEEccccccccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccEEccccccccEEEEEccccccHHHHHHHcccccccccccccccccccc

ccccccccccEEEEEEEccccHHHHHccccEEEEEEccccEEEEcccEEEEEEEEccccccHHHHHHHHcHHHHHHHcccccEEEEEEccccccHHHHHcEcccccccEcHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEccEEEEcccccccccccccccccccccccccccEcEEEcccccEEEcccccEEEccHHHHHHHHHHHHHHcccccccHHHHHHHcEEEEEEEEEEHHHcEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccHHHccHHHHHHHHHHHHHHcccccccccccHHHcHHHHHcHHHcccccEEEEEEEcccccccHHEcccccccHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccHHHHccccccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccEHEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccHHHHHcHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccccccccccccHHcccccccccccccccHHHHHHcccccccccccHHHHHHHcccccEEEEEcccccEEEEEEEEcccccHHHHHHHccccHHHccccccHHccccc

metgggedccVKVAVHvrpligderaqgckdcvavvpgkpqvqigthsftfdhvygstgspssamfdecIAPLVDGLFQGYNATVLAygqtgsgktytmgtgfkdgyqtgiIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVrdlldppclnkpdtanghtgkvtvpgkppiqiretsngvitlAGSTEVSVSSLKEMAACLEQgslsratgstnmnnqssrsHAIFTITLEQMrklspvslgdsspnesmnEEYLCAKLHLVDlagserakrtgsdglrfkegvhINRGLLALGNVISalgddkkrkegvhvpyrdskLTRLLQDslggnsrtvMIGNLFILKFdlscispadinaEETLNTLKYANRarniqnkpivnrdpmSTEMLKMRQQLEFLQAELcargggsssdEVQVLKERIAWLEAANEDLCRELHEYRSrctdveqretdaqdgspcplksdglkrslNSIEQTdyqmgenitgdsREIDEVAKEWEHTLLQNSMDKELNELNRRLEEkesemklvggsdtAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENlasnsdgqtqkLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKssarensavtngnltngqsnEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEfaskglspprgkngfarvssmspnarMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARsasgnlhnslehfaddtsgppspmsvpaqkqlkytpgiangsiRESAAFINqnrkrvplgqlSMKKLAALGQGGKLWRWKRSHHQWLLQFKwkwqkpwrlsewirhsdetivrakprpralphag

metgggedccvKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNkpdtanghtgkvtvpgkppiqiretsngvitLAGSTEVSVSSLKEMAACLEQGSLsratgstnmnnqssrSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSerakrtgsdglrfkegvhINRGLLALGNVISalgddkkrkegvhvpyrdskltrllqdslggnsrTVMIGNLFILKFDLSCISPADINAEETLNTLKyanrarniqnkpivnrdpMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEqretdaqdgspcplksdglkRSLNSIEQtdyqmgenitgDSREIDEVAKEWEHtllqnsmdkELNELNRRLEEKesemklvggsdtaALKQHFGKKiaeledekrTVQKERDHLLTEIEnlasnsdgqtqKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGrrneyerhklqalnqrqklvLQRKTEEAAMATKRLKELlesrkssarensavtngnltngqsnEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDefaskglspprgkngfarvssmspnARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELvgllrqsevrrKEVEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFkwkwqkpwrlsewirhsdetivrakprpralphag

METGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDkelnelnrrleekeSEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRaalaeelaVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSevrrkeveeelklreQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPHAG

*******DCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCL*****************************VITL*****************************************IFTIT************************YLCAKLHLVDLAG**********GLRFKEGVHINRGLLALGNVISALGDD*****GVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNI*********************LEFLQAELCAR********VQVLKERIAWLEAANEDLCRELHEYRS*****************************************************************************************************************************************************************************************FI******************************************************************************************************FQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQV**************************************************************FTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLL*********************AI**************************************************AAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETI**************

***********KVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTAN*************IQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRK******************YLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLE*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************MADAKNLLQYMFN****************************************************************************************************************************************KRSHHQWLLQFKWKWQKPWRLSE***********************

********CCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLS************MNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCA*********VQVLKERIAWLEAANEDLCRELHEYRSRC***************CPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQEN****************RLQDEIQFIKA*********KQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLE**********AVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPR********

********CCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPP********************PPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAG***********LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIE************DSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSA****************NEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDE*********************************ENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLAR*************************VP*QKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHS******************

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METGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLxxxxxxxxxxxxxxxxxxxxxxxxxxxxDTAALxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSDGQTQKLQDVHAHKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVxxxxxxxxxxxxxxxxxxxxxRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPHAG

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1044	2.2.26 [Sep-21-2011]
O95239		1232	Chromosome-associated kin	yes	no	0.802	0.680	0.374	1e-144
P33174		1231	Chromosome-associated kin	yes	no	0.813	0.689	0.355	1e-141
Q2VIQ3		1234	Chromosome-associated kin	no	no	0.804	0.680	0.367	1e-137
Q91784		1226	Chromosome-associated kin	N/A	no	0.780	0.664	0.363	1e-137
Q90640		1225	Chromosome-associated kin	yes	no	0.764	0.651	0.369	1e-136
O75037		1637	Kinesin-like protein KIF2	no	no	0.367	0.234	0.487	1e-101
Q9QXL1		1668	Kinesin-like protein KIF2	no	no	0.368	0.230	0.480	1e-100
Q7Z4S6		1674	Kinesin-like protein KIF2	no	no	0.363	0.226	0.483	9e-97
Q9QXL2		1672	Kinesin-like protein KIF2	no	no	0.359	0.224	0.485	1e-96
Q86VH2		1401	Kinesin-like protein KIF2	no	no	0.370	0.276	0.427	2e-88

>sp\|O95239\|KIF4A_HUMAN Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3	Back alignment and function desciption

 Score =  514 bits (1324), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 362/967 (37%), Positives = 529/967 (54%), Gaps = 129/967 (13%)

Query: 11  VKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGT-HSFTFDHVYGSTGSPSSAMFDEC 69
           V+VA+  RPL+  E ++GC+ C++ VPG+PQV +GT  SFT+D V+  + +    +F+  
Sbjct: 10  VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPS-TEQEEVFNTA 68

Query: 70  IAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGF----KDGYQTGIIPLVMNVLFSKIET 125
           +APL+ G+F+GYNATVLAYGQTGSGKTY+MG  +    ++    G+IP V+ +LF +I+ 
Sbjct: 69  VAPLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDK 128

Query: 126 LKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGV 185
            K   EF L VS++EI  EE+ DLL P                    K  I IRE     
Sbjct: 129 -KSDFEFTLKVSYLEIYNEEILDLLCPS-----------------REKAQINIREDPKEG 170

Query: 186 ITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVS 245
           I + G TE +V    +  +CLEQG+ SR   ST MN+QSSRSHAIFTI+LEQ +K     
Sbjct: 171 IKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKK----- 225

Query: 246 LGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISAL 305
              S  N S       +KLHLVDLAGSER K+T ++G R KEG++INRGLL LGNVISAL
Sbjct: 226 ---SDKNSSFR-----SKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISAL 277

Query: 306 GDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEETL 365
           GDDKK   G  VPYRDSKLTRLLQDSLGGNS T+MI          +C+SPAD N EETL
Sbjct: 278 GDDKK---GGFVPYRDSKLTRLLQDSLGGNSHTLMI----------ACVSPADSNLEETL 324

Query: 366 NTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQL------------------------EF 401
           NTL+YA+RAR I+NKPIVN DP + E+  ++QQ+                        E 
Sbjct: 325 NTLRYADRARKIKNKPIVNIDPQTAELNHLKQQVQQLQVLLLQAHGGTLPGSITVEPSEN 384

Query: 402 LQA------------ELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCT-- 447
           LQ+            E  +RG   ++ +   + ERI   E ANE +  +L E R      
Sbjct: 385 LQSLMEKNQSLVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACK 444

Query: 448 --------DVEQRETDAQDGSPCPLK------SD----GLKRSLNSIEQTDYQMGENITG 489
                    +E +E        C L+      SD     +  ++++  + + Q+ E    
Sbjct: 445 LDLQKLVETLEDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQV-ETSPE 503

Query: 490 DSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDT--AALKQHFGKKI 547
            SR  D  A   +H L Q  M KEL ELN+ L  KE+  + +  +D+    ++  +   I
Sbjct: 504 TSRSSD--AFTTQHALRQAQMSKELVELNKALALKEALARKMTQNDSQLQPIQYQYQDNI 561

Query: 548 AELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQ 607
            ELE E   +QKE++ L+ E++   +  D    KL +    +L+ LE QI DLKKK   Q
Sbjct: 562 KELELEVINLQKEKEELVLELQ--TAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQ 619

Query: 608 VQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEG 667
            +LLK K+ ++    +L  EI+ +K Q+VQL  ++K++AE+FRQWK  ++KE++QL++  
Sbjct: 620 SKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERD 679

Query: 668 RRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNG 727
           R+ +YE  KL+   Q+Q  VL+RKTEEAA A KRLK+ L+ ++  A +     +  +   
Sbjct: 680 RKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQREVADKRKETQSRGMEGT 739

Query: 728 QSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPP- 786
            +  K+   WL +E+EVMV+  E +       + R  LA+++A LK+  E    G +PP 
Sbjct: 740 AARVKN---WLGNEIEVMVSTEEAKRHLNDLLEDRKILAQDVAQLKEKKE---SGENPPP 793

Query: 787 ---RGKNGFARVS---SMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTN 840
              R       V    S S ++   +I SLE  +   S  +  +  +L +AE  DR    
Sbjct: 794 KLRRRTFSLTEVRGQVSESEDSITKQIESLETEMEFRSAQIADLQQKLLDAESEDR---P 850

Query: 841 RGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRK 900
           + RW  + ++ +AK  L+Y+   L  ++ Q+ + +  +K+ K    ++  +L +      
Sbjct: 851 KQRWENIATILEAKCALKYLIGELVSSKIQVSKLESSLKQSKTSCADMQKMLFEERNHFA 910

Query: 901 EVEEELK 907
           E+E EL+
Sbjct: 911 EIETELQ 917

Motor protein that translocates PRC1 to the plus ends of interdigitating spindle microtubules during the metaphase to anaphase transition, an essential step for the formation of an organized central spindle midzone and midbody and for successful cytokinesis. May play a role in mitotic chromosomal positioning and bipolar spindle stabilization.
Homo sapiens (taxid: 9606)

>sp\|P33174\|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=3	Back alignment and function description

>sp\|Q2VIQ3\|KIF4B_HUMAN Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=2 SV=2	Back alignment and function description

>sp\|Q91784\|KIF4_XENLA Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1	Back alignment and function description

>sp\|Q90640\|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1	Back alignment and function description

>sp\|O75037\|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2	Back alignment and function description

>sp\|Q9QXL1\|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2	Back alignment and function description

>sp\|Q7Z4S6\|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2	Back alignment and function description

>sp\|Q9QXL2\|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2	Back alignment and function description

>sp\|Q86VH2\|KIF27_HUMAN Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1044
255538224		1067	Kinesin heavy chain, putative [Ricinus c	0.985	0.964	0.889	0.0
224067254		1055	predicted protein [Populus trichocarpa]	0.980	0.970	0.864	0.0
359492582		1071	PREDICTED: chromosome-associated kinesin	0.981	0.957	0.853	0.0
302142281		1077	unnamed protein product [Vitis vinifera]	0.981	0.951	0.850	0.0
147790676		1094	hypothetical protein VITISV_001140 [Viti	0.981	0.936	0.835	0.0
449447023		1050	PREDICTED: chromosome-associated kinesin	0.981	0.976	0.826	0.0
356510469		1027	PREDICTED: chromosome-associated kinesin	0.976	0.992	0.818	0.0
359480793		1031	PREDICTED: chromosome-associated kinesin	0.978	0.991	0.809	0.0
356553972		1030	PREDICTED: chromosome-associated kinesin	0.980	0.994	0.822	0.0
296082375		1032	unnamed protein product [Vitis vinifera]	0.978	0.990	0.809	0.0

>gi\|255538224\|ref\|XP_002510177.1\| Kinesin heavy chain, putative [Ricinus communis] gi\|223550878\|gb\|EEF52364.1\| Kinesin heavy chain, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1909 bits (4946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 925/1040 (88%), Positives = 972/1040 (93%), Gaps = 11/1040 (1%)

Query: 3    TGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPS 62
            +   EDCCVKVAVHVRPLIGDERAQGC+DCV VV GKPQVQIGTHSFTFDHVYGS+ SP+
Sbjct: 21   SAAAEDCCVKVAVHVRPLIGDERAQGCQDCVTVVSGKPQVQIGTHSFTFDHVYGSSSSPA 80

Query: 63   SAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSK 122
            SAMF+EC+APLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDG QTGIIP VMNVL+SK
Sbjct: 81   SAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLYSK 140

Query: 123  IETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETS 182
            IETLK QTEFQLHVSFIEILKEEVRDLLDP  LNKPDTANGHTGKV VPGKPPIQIRETS
Sbjct: 141  IETLKHQTEFQLHVSFIEILKEEVRDLLDPTSLNKPDTANGHTGKVNVPGKPPIQIRETS 200

Query: 183  NGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLS 242
            NGVITLAGSTEVSVS+LKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKL+
Sbjct: 201  NGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLN 260

Query: 243  PVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVI 302
            PV  GDSSPNE MNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHIN+GLLALGNVI
Sbjct: 261  PVFPGDSSPNEGMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVI 320

Query: 303  SALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAE 362
            SALGD+KKRKEGVHVPYRDSKLTRLLQDSLGGNS+TVMI          +CISPADINAE
Sbjct: 321  SALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMI----------ACISPADINAE 370

Query: 363  ETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLK 422
            ETLNTLKYANRARNIQNKP+VNRDPMS+EML+MRQQLE+LQAELCARGGGSSSDEVQVLK
Sbjct: 371  ETLNTLKYANRARNIQNKPVVNRDPMSSEMLRMRQQLEYLQAELCARGGGSSSDEVQVLK 430

Query: 423  ERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIEQTDYQ 482
            ERIAWLEAANEDLCRELHEYRSRCT VEQRETDAQDGS C +K+DGLKRSL SIE TDYQ
Sbjct: 431  ERIAWLEAANEDLCRELHEYRSRCTAVEQRETDAQDGSTCYVKTDGLKRSLQSIESTDYQ 490

Query: 483  MGENITGDSREIDE-VAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQ 541
            MGE ++GDSREIDE VAKEWEHTLLQN+MDKEL+ELNRRLEEKESEMKL GG D AALKQ
Sbjct: 491  MGETMSGDSREIDEEVAKEWEHTLLQNTMDKELHELNRRLEEKESEMKLFGGVDPAALKQ 550

Query: 542  HFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLK 601
            HFGKKI ELEDEKRTVQ+ERD LL EIEN++++SDGQTQK+QD+HA KLK+LEAQILDLK
Sbjct: 551  HFGKKIMELEDEKRTVQQERDRLLAEIENISASSDGQTQKMQDIHAQKLKALEAQILDLK 610

Query: 602  KKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELL 661
            KKQENQVQLLKQKQKSDEAAKRLQDEIQ IKAQKVQLQHRIKQEAEQFRQWKASREKELL
Sbjct: 611  KKQENQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQHRIKQEAEQFRQWKASREKELL 670

Query: 662  QLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTN 721
            QLRKEGRRNEYERHKLQALNQRQK+VLQRKTEEAAMATKRLKELLE+RKSSARENSA+ N
Sbjct: 671  QLRKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSARENSAIAN 730

Query: 722  GNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASK 781
            GN TNGQSNEKS QRW+DHELEVMVNVHEVRF+YEKQSQVRAALAEELAVLKQV EF SK
Sbjct: 731  GNGTNGQSNEKSLQRWVDHELEVMVNVHEVRFEYEKQSQVRAALAEELAVLKQVGEFTSK 790

Query: 782  GLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNR 841
            GLSPPRGKNGFAR SSMSPNARMARISSLENMLSI+SNSLVAMASQLSEAEER+R FTNR
Sbjct: 791  GLSPPRGKNGFARASSMSPNARMARISSLENMLSITSNSLVAMASQLSEAEERERGFTNR 850

Query: 842  GRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKE 901
            GRWNQLRSM DAKNLLQYMFNSL DARCQ+WEK++EIKEMKEQ KELV LLRQSE RRKE
Sbjct: 851  GRWNQLRSMGDAKNLLQYMFNSLGDARCQIWEKEMEIKEMKEQFKELVSLLRQSEARRKE 910

Query: 902  VEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGS 961
            VE+ELKLREQAVAI LA SASGN   SL+HFADD SGP SPMSVPAQKQLKYTPGIANGS
Sbjct: 911  VEKELKLREQAVAIALATSASGNSPISLKHFADDMSGPLSPMSVPAQKQLKYTPGIANGS 970

Query: 962  IRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSE 1021
            +RESAAFI+Q RK VPLG LSM+KL   GQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSE
Sbjct: 971  VRESAAFIDQTRKMVPLGHLSMRKLVVAGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSE 1030

Query: 1022 WIRHSDETIVRAKPRPRALP 1041
             IRHSDETI+RAK RP ALP
Sbjct: 1031 MIRHSDETIMRAKHRPHALP 1050

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224067254\|ref\|XP_002302432.1\| predicted protein [Populus trichocarpa] gi\|222844158\|gb\|EEE81705.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359492582\|ref\|XP_002282968.2\| PREDICTED: chromosome-associated kinesin KIF4A-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302142281\|emb\|CBI19484.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147790676\|emb\|CAN61020.1\| hypothetical protein VITISV_001140 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449447023\|ref\|XP_004141269.1\| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] gi\|449523834\|ref\|XP_004168928.1\| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356510469\|ref\|XP_003523960.1\| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]	Back alignment and taxonomy information

>gi\|359480793\|ref\|XP_002278379.2\| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356553972\|ref\|XP_003545324.1\| PREDICTED: chromosome-associated kinesin KIF4A-like [Glycine max]	Back alignment and taxonomy information

>gi\|296082375\|emb\|CBI21380.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1044
TAIR\|locus:2160912		1035	FRA1 "FRAGILE FIBER 1" [Arabid	0.975	0.983	0.765	0.0
TAIR\|locus:2074855		1051	KICP-02 [Arabidopsis thaliana	0.951	0.944	0.623	0.0
TAIR\|locus:2173537		1294	AT5G60930 [Arabidopsis thalian	0.692	0.558	0.444	1.4e-142
MGI\|MGI:108389		1231	Kif4 "kinesin family member 4"	0.655	0.555	0.316	7e-108
UNIPROTKB\|F1PDX5		1234	KIF4A "Uncharacterized protein	0.655	0.554	0.314	7.6e-108
UNIPROTKB\|K7GQ60		1210	KIF4A "Uncharacterized protein	0.654	0.564	0.315	1e-107
UNIPROTKB\|F1RTL0		1234	KIF4A "Uncharacterized protein	0.654	0.553	0.315	1.2e-107
UNIPROTKB\|Q2VIQ3		1234	KIF4B "Chromosome-associated k	0.659	0.558	0.318	5.9e-106
UNIPROTKB\|F1MCP5		1238	KIF4A "Uncharacterized protein	0.654	0.551	0.316	6.8e-106
UNIPROTKB\|E9PSJ3		1231	Kif4 "Protein Kif4" [Rattus no	0.493	0.418	0.344	1.8e-105

TAIR\|locus:2160912 FRA1 "FRAGILE FIBER 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3992 (1410.3 bits), Expect = 0., P = 0.
 Identities = 798/1043 (76%), Positives = 886/1043 (84%)

Query:     7 EDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMF 66
             +DC VKVAVH+RPLIGDER QGC+DCV VV GKPQVQIG+HSFTFDHVYGS+GSPS+ M+
Sbjct:     8 DDCSVKVAVHIRPLIGDERIQGCQDCVTVVTGKPQVQIGSHSFTFDHVYGSSGSPSTEMY 67

Query:    67 DECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETL 126
             +EC APLVDGLFQGYNATVLAYGQTGSGKTYTMGTG  D  QTGIIP VMN LF+KIETL
Sbjct:    68 EECAAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGCGDSSQTGIIPQVMNALFTKIETL 127

Query:   127 KDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTAN-GHTGKVT-VPGKPPIQIRETSNG 184
             K Q EFQ+HVSFIEI KEEV+DLLDP  +NK DT N GH GKV  VPGKPPIQIRETSNG
Sbjct:   128 KQQIEFQIHVSFIEIHKEEVQDLLDPCTVNKSDTNNTGHVGKVAHVPGKPPIQIRETSNG 187

Query:   185 VITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPV 244
             VITLAGSTEVSVS+LKEMAACL+QGS+SRATGSTNMNNQSSRSHAIFTIT+EQMRK++  
Sbjct:   188 VITLAGSTEVSVSTLKEMAACLDQGSVSRATGSTNMNNQSSRSHAIFTITVEQMRKINTD 247

Query:   245 SLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISA 304
             S  + + N S+ EEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHIN+GLLALGNVISA
Sbjct:   248 SPENGAYNGSLKEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISA 307

Query:   305 LGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEET 364
             LGD+KKRK+G HVPYRDSKLTRLLQDSLGGNSRTVMI          +CISPADINAEET
Sbjct:   308 LGDEKKRKDGAHVPYRDSKLTRLLQDSLGGNSRTVMI----------ACISPADINAEET 357

Query:   365 LNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKER 424
             LNTLKYANRARNI+NKP+VNRDP+S+EMLKMRQQ+E+LQAEL  R GGSS  EVQ LKER
Sbjct:   358 LNTLKYANRARNIRNKPVVNRDPVSSEMLKMRQQVEYLQAELSLRTGGSSCAEVQALKER 417

Query:   425 IAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPL----KSDGLKRSLNSIEQTD 480
             I WLE ANE+LCRELHEYRSRC  VE  E D +D     +    + DGLKRSL+SIE ++
Sbjct:   418 IVWLETANEELCRELHEYRSRCPGVEHSEKDFKDIRADDIVGSVRPDGLKRSLHSIESSN 477

Query:   481 YQMGENITGDSREIDEVAKEWEHTLLQNSMDXXXXXXXXXXXXXXSEMKLVGGSDTAALK 540
             Y M E  TGDSREIDE AKEWEH LLQNSMD              SEMKL  G D AALK
Sbjct:   478 YPMVEATTGDSREIDEEAKEWEHKLLQNSMDKELYELNRRLEEKESEMKLFDGYDPAALK 537

Query:   541 QHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDL 600
             QHFGKKIAE+EDEKR+VQ+ER+ LL EIENLAS  DGQ QKLQDVHA  LK+LEAQILDL
Sbjct:   538 QHFGKKIAEVEDEKRSVQEERNRLLAEIENLAS--DGQAQKLQDVHAQNLKALEAQILDL 595

Query:   601 KKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKEL 660
             KKKQE+QVQLLKQKQKSD+AA+RLQDEIQ IKAQKVQLQHR+KQEAEQFRQWKASREKEL
Sbjct:   596 KKKQESQVQLLKQKQKSDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQFRQWKASREKEL 655

Query:   661 LQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVT 720
             LQLRKEGR++EYERHKLQALNQRQK+VLQRKTEEAAMATKRLKELLE+RKSS RE+SA T
Sbjct:   656 LQLRKEGRKSEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSPREHSAGT 715

Query:   721 NGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRXXXXXXXXVLKQVDEFAS 780
             NG  TNGQ+NEKS QRWLDHELEVMVNVHEVR +YEKQS VR        VL+QVDEFA 
Sbjct:   716 NGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRHEYEKQSHVRAALAEELAVLRQVDEFAV 775

Query:   781 KGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTN 840
             KGLSPPRGKNGFAR SS+SPNARMARISSLENML ISSNSLVAMASQLSEAEER+R FTN
Sbjct:   776 KGLSPPRGKNGFARASSLSPNARMARISSLENMLVISSNSLVAMASQLSEAEERERAFTN 835

Query:   841 RGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSXXXXX 900
             RGRWNQLRSM +AKNLLQYMFNSLA+ RCQLWEKD+EIKEMK+Q KE+VGLLRQS     
Sbjct:   836 RGRWNQLRSMGEAKNLLQYMFNSLAETRCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRK 895

Query:   901 XXXXXXXXXXQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANG 960
                       QA+A +L     G   +S++H A+D S  PSPM+VPAQKQLK+TPGIANG
Sbjct:   896 EAEKELKLREQAIATSL-----GTPPSSVKHVAEDLS-TPSPMTVPAQKQLKFTPGIANG 949

Query:   961 SIRESAAFINQNRKRVPLGQLSMKKLAALG-QGGKLWRWKRSHHQWLLQFKWKWQKPWRL 1019
              +R  AAF++ N+K VP+GQ+SM+KL+A+G QGG+LWRWKRSHHQW++QFKWKWQKPWRL
Sbjct:   950 KVRGPAAFLDTNKKMVPMGQVSMRKLSAVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRL 1009

Query:  1020 SEWIRHSDETIVRAKPRPRALPH 1042
             SEWIR SDET++++KPR +ALP+
Sbjct:  1010 SEWIRTSDETLLKSKPRLKALPN 1032

GO:0003777 "microtubule motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0010215 "cellulose microfibril organization" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR\|locus:2074855 KICP-02 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2173537 AT5G60930 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

MGI\|MGI:108389 Kif4 "kinesin family member 4" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PDX5 KIF4A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|K7GQ60 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RTL0 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|Q2VIQ3 KIF4B "Chromosome-associated kinesin KIF4B" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MCP5 KIF4A "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PSJ3 Kif4 "Protein Kif4" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1044
cd01372		341	cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik	0.0
smart00129		335	smart00129, KISc, Kinesin motor, catalytic domain	1e-137
pfam00225		326	pfam00225, Kinesin, Kinesin motor domain	1e-132
cd00106		328	cd00106, KISc, Kinesin motor domain	1e-122
cd01370		338	cd01370, KISc_KIP3_like, Kinesin motor domain, KIP	1e-110
cd01365		356	cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K	1e-109
cd01369		325	cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine	1e-101
cd01371		333	cd01371, KISc_KIF3, Kinesin motor domain, kinesins	1e-99
cd01366		329	cd01366, KISc_C_terminal, Kinesin motor domain, KI	7e-99
cd01364		352	cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC	7e-98
cd01374		321	cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E	1e-97
cd01367		322	cd01367, KISc_KIF2_like, Kinesin motor domain, KIF	3e-84
COG5059		568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	4e-82
cd01373		337	cd01373, KISc_KLP2_like, Kinesin motor domain, KLP	2e-78
cd01375		334	cd01375, KISc_KIF9_like, Kinesin motor domain, KIF	4e-71
cd01376		319	cd01376, KISc_KID_like, Kinesin motor domain, KIF2	1e-65
cd01368		345	cd01368, KISc_KIF23_like, Kinesin motor domain, KI	1e-63
PLN03188		1320	PLN03188, PLN03188, kinesin-12 family protein; Pro	9e-58
cd01363		186	cd01363, Motor_domain, Myosin and Kinesin motor do	3e-34
cd01363		186	cd01363, Motor_domain, Myosin and Kinesin motor do	5e-09
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	7e-09
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	4e-08
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	5e-08
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-07
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-07
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	3e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-07
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	4e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-06
pfam05557		722	pfam05557, MAD, Mitotic checkpoint protein	2e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	5e-05
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	1e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	2e-04
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
COG1579		239	COG1579, COG1579, Zn-ribbon protein, possibly nucl	2e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-04
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	3e-04
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	5e-04
pfam12128		1198	pfam12128, DUF3584, Protein of unknown function (D	7e-04
PRK00286		438	PRK00286, xseA, exodeoxyribonuclease VII large sub	7e-04
pfam13868		349	pfam13868, Trichoplein, Tumour suppressor, Mitosta	8e-04
pfam05010		207	pfam05010, TACC, Transforming acidic coiled-coil-c	9e-04
TIGR03185		650	TIGR03185, DNA_S_dndD, DNA sulfur modification pro	0.001
pfam00038		312	pfam00038, Filament, Intermediate filament protein	0.001
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.002
COG4372		499	COG4372, COG4372, Uncharacterized protein conserve	0.002
pfam10211		189	pfam10211, Ax_dynein_light, Axonemal dynein light	0.002
COG3064		387	COG3064, TolA, Membrane protein involved in colici	0.002
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.003
pfam01576		859	pfam01576, Myosin_tail_1, Myosin tail	0.003
COG5281		833	COG5281, COG5281, Phage-related minor tail protein	0.003
PRK11448		1123	PRK11448, hsdR, type I restriction enzyme EcoKI su	0.003
TIGR00606		1311	TIGR00606, rad50, rad50	0.003
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.004
pfam02463		1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.004

>gnl\|CDD\|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily	Back alignment and domain information

 Score =  573 bits (1480), Expect = 0.0
 Identities = 217/374 (58%), Positives = 260/374 (69%), Gaps = 37/374 (9%)

Query: 9   CCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGT-HSFTFDHVYGSTGSPSSAMFD 67
             V+VAV VRPL+  E  +GC+ CV+VVPG+PQV +GT  SFTFD+V+  + S    +++
Sbjct: 1   SSVRVAVRVRPLLPKELLEGCQVCVSVVPGEPQVTVGTDKSFTFDYVFDPSTSQE-EVYN 59

Query: 68  ECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGY---QTGIIPLVMNVLFSKIE 124
            C+APLVDGLF+GYNATVLAYGQTGSGKTYTMGT F       + GIIP  +  +F KI+
Sbjct: 60  TCVAPLVDGLFEGYNATVLAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKID 119

Query: 125 TLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNG 184
             KD+ +FQL VSF+E+  EEVRDLL P                +   K PIQIRE S G
Sbjct: 120 EKKDEPDFQLKVSFLELYNEEVRDLLSP----------------STSEKSPIQIREDSKG 163

Query: 185 VITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPV 244
            I + G TEV+V+S +E+ +CLEQGSLSR T ST MN+QSSRSHAIFTITLEQ RK  P 
Sbjct: 164 NIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGP- 222

Query: 245 SLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISA 304
               +  +       L +K H VDLAGSER K+TG+ G R KEG+ IN GLLALGNVISA
Sbjct: 223 ---IAPMSGDDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISA 279

Query: 305 LGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNLFILKFDLSCISPADINAEET 364
           LGD+ K+  G HVPYRDSKLTRLLQDSLGGNS T+MI          +C+SPAD N EET
Sbjct: 280 LGDESKK--GSHVPYRDSKLTRLLQDSLGGNSHTLMI----------ACVSPADSNFEET 327

Query: 365 LNTLKYANRARNIQ 378
           LNTLKYANRARNI+
Sbjct: 328 LNTLKYANRARNIK 341

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341

>gnl\|CDD\|214526 smart00129, KISc, Kinesin motor, catalytic domain	Back alignment and domain information

>gnl\|CDD\|215803 pfam00225, Kinesin, Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238054 cd00106, KISc, Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup	Back alignment and domain information

>gnl\|CDD\|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins	Back alignment and domain information

>gnl\|CDD\|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup	Back alignment and domain information

>gnl\|CDD\|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins	Back alignment and domain information

>gnl\|CDD\|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins	Back alignment and domain information

>gnl\|CDD\|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division	Back alignment and domain information

>gnl\|CDD\|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis	Back alignment and domain information

>gnl\|CDD\|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group	Back alignment and domain information

>gnl\|CDD\|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>gnl\|CDD\|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup	Back alignment and domain information

>gnl\|CDD\|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling	Back alignment and domain information

>gnl\|CDD\|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup	Back alignment and domain information

>gnl\|CDD\|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup	Back alignment and domain information

>gnl\|CDD\|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|218636 pfam05557, MAD, Mitotic checkpoint protein	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584)	Back alignment and domain information

>gnl\|CDD\|234714 PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	Back alignment and domain information

>gnl\|CDD\|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin	Back alignment and domain information

>gnl\|CDD\|218380 pfam05010, TACC, Transforming acidic coiled-coil-containing protein (TACC)	Back alignment and domain information

>gnl\|CDD\|234141 TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	Back alignment and domain information

>gnl\|CDD\|200948 pfam00038, Filament, Intermediate filament protein	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>gnl\|CDD\|204414 pfam10211, Ax_dynein_light, Axonemal dynein light chain	Back alignment and domain information

>gnl\|CDD\|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|144972 pfam01576, Myosin_tail_1, Myosin tail	Back alignment and domain information

>gnl\|CDD\|227606 COG5281, COG5281, Phage-related minor tail protein [Function unknown]	Back alignment and domain information

>gnl\|CDD\|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional	Back alignment and domain information

>gnl\|CDD\|129694 TIGR00606, rad50, rad50	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1044
KOG0244		913	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0245		1221	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG4280		574	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0240		607	consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	100.0
PLN03188		1320	kinesin-12 family protein; Provisional	100.0
KOG0241		1714	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0242		675	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01373		337	KISc_KLP2_like Kinesin motor domain, KLP2-like sub	100.0
cd01370		338	KISc_KIP3_like Kinesin motor domain, KIP3-like sub	100.0
cd01368		345	KISc_KIF23_like Kinesin motor domain, KIF23-like s	100.0
cd01365		356	KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p	100.0
cd01364		352	KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind	100.0
cd01372		341	KISc_KIF4 Kinesin motor domain, KIF4-like subfamil	100.0
cd01371		333	KISc_KIF3 Kinesin motor domain, kinesins II or KIF	100.0
cd01367		322	KISc_KIF2_like Kinesin motor domain, KIF2-like gro	100.0
cd01369		325	KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy	100.0
cd01376		319	KISc_KID_like Kinesin motor domain, KIF22/Kid-like	100.0
cd01375		334	KISc_KIF9_like Kinesin motor domain, KIF9-like sub	100.0
cd01374		321	KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like	100.0
KOG0239		670	consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	100.0
cd01366		329	KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/	100.0
KOG0246		676	consensus Kinesin-like protein [Cytoskeleton]	100.0
smart00129		335	KISc Kinesin motor, catalytic domain. ATPase. Micr	100.0
KOG0247		809	consensus Kinesin-like protein [Cytoskeleton]	100.0
PF00225		335	Kinesin: Kinesin motor domain; InterPro: IPR001752	100.0
cd00106		328	KISc Kinesin motor domain. This catalytic (head) d	100.0
COG5059		568	KIP1 Kinesin-like protein [Cytoskeleton]	100.0
cd01363		186	Motor_domain Myosin and Kinesin motor domain. Thes	100.0
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.92
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.84
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	99.42
PRK02224		880	chromosome segregation protein; Provisional	99.04
PRK02224		880	chromosome segregation protein; Provisional	99.04
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	99.0
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	98.99
PRK03918		880	chromosome segregation protein; Provisional	98.95
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	98.87
PRK03918		880	chromosome segregation protein; Provisional	98.87
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	98.81
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	98.76
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	98.69
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	98.66
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	98.65
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	98.59
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	98.52
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	98.51
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	98.5
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	98.49
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	98.48
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	98.45
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	98.4
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.39
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	98.36
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	98.34
PF00038		312	Filament: Intermediate filament protein; InterPro:	98.34
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	98.33
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	98.33
COG5059		568	KIP1 Kinesin-like protein [Cytoskeleton]	98.27
KOG0971		1243	consensus Microtubule-associated protein dynactin	98.27
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	98.27
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.26
PRK01156		895	chromosome segregation protein; Provisional	98.23
KOG4673		961	consensus Transcription factor TMF, TATA element m	98.2
KOG0963		629	consensus Transcription factor/CCAAT displacement	98.13
PF00038		312	Filament: Intermediate filament protein; InterPro:	98.11
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	98.04
KOG0964		1200	consensus Structural maintenance of chromosome pro	98.02
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	98.01
KOG0996		1293	consensus Structural maintenance of chromosome pro	98.0
KOG0933		1174	consensus Structural maintenance of chromosome pro	97.93
PRK01156		895	chromosome segregation protein; Provisional	97.89
PRK04863		1486	mukB cell division protein MukB; Provisional	97.85
KOG4673		961	consensus Transcription factor TMF, TATA element m	97.78
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.77
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	97.76
KOG0971		1243	consensus Microtubule-associated protein dynactin	97.74
KOG0996		1293	consensus Structural maintenance of chromosome pro	97.74
KOG0964		1200	consensus Structural maintenance of chromosome pro	97.73
PRK04778		569	septation ring formation regulator EzrA; Provision	97.69
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	97.66
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	97.58
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	97.57
PRK11637		428	AmiB activator; Provisional	97.54
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.47
PHA02562		562	46 endonuclease subunit; Provisional	97.43
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	97.42
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	97.4
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	97.25
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	97.18
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	97.17
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	97.15
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	97.14
PHA02562		562	46 endonuclease subunit; Provisional	96.97
PRK11281		1113	hypothetical protein; Provisional	96.96
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	96.9
KOG0962		1294	consensus DNA repair protein RAD50, ABC-type ATPas	96.89
PRK10929		1109	putative mechanosensitive channel protein; Provisi	96.85
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	96.77
PRK04778		569	septation ring formation regulator EzrA; Provision	96.74
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	96.74
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	96.71
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	96.65
KOG0018		1141	consensus Structural maintenance of chromosome pro	96.6
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	96.59
COG0556		663	UvrB Helicase subunit of the DNA excision repair c	96.57
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	96.51
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	96.45
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	96.35
PRK04863		1486	mukB cell division protein MukB; Provisional	96.33
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	96.26
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	96.23
COG4942		420	Membrane-bound metallopeptidase [Cell division and	96.17
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	96.09
PF15066		527	CAGE1: Cancer-associated gene protein 1 family	96.07
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	95.97
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	95.96
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	95.91
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	95.84
KOG0933		1174	consensus Structural maintenance of chromosome pro	95.81
COG4942		420	Membrane-bound metallopeptidase [Cell division and	95.77
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	95.73
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	95.69
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	95.64
PF15066		527	CAGE1: Cancer-associated gene protein 1 family	95.64
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	95.63
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	95.62
KOG0963		629	consensus Transcription factor/CCAAT displacement	95.57
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	95.32
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	95.3
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	95.28
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	95.24
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	95.17
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	95.15
PF14662		193	CCDC155: Coiled-coil region of CCDC155	95.12
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	95.05
PRK09039		343	hypothetical protein; Validated	94.91
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	94.86
KOG4807		593	consensus F-actin binding protein, regulates actin	94.64
PF14988		206	DUF4515: Domain of unknown function (DUF4515)	94.62
PRK09039		343	hypothetical protein; Validated	94.51
PF00308		219	Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013	94.33
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	94.32
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	94.29
COG5185		622	HEC1 Protein involved in chromosome segregation, i	94.23
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	94.2
KOG1003		205	consensus Actin filament-coating protein tropomyos	94.14
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	94.02
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	94.0
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	93.82
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	93.78
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	93.78
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	93.77
KOG1937		521	consensus Uncharacterized conserved protein [Funct	93.77
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	93.72
KOG0962		1294	consensus DNA repair protein RAD50, ABC-type ATPas	93.7
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	93.59
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	93.56
COG2805		353	PilT Tfp pilus assembly protein, pilus retraction	93.54
PF14662		193	CCDC155: Coiled-coil region of CCDC155	93.31
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	93.29
PRK06893		229	DNA replication initiation factor; Validated	93.25
PRK06620		214	hypothetical protein; Validated	93.15
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	93.09
KOG1850		391	consensus Myosin-like coiled-coil protein [Cytoske	93.09
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	92.97
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	92.75
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	92.35
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	92.35
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	92.29
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	91.99
KOG0018		1141	consensus Structural maintenance of chromosome pro	91.92
KOG1937		521	consensus Uncharacterized conserved protein [Funct	91.87
PRK09087		226	hypothetical protein; Validated	91.72
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	91.61
COG4372		499	Uncharacterized protein conserved in bacteria with	91.47
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	91.41
PRK10929		1109	putative mechanosensitive channel protein; Provisi	91.22
PRK14086		617	dnaA chromosomal replication initiation protein; P	91.1
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	90.64
KOG4807		593	consensus F-actin binding protein, regulates actin	90.61
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	90.59
PRK00149		450	dnaA chromosomal replication initiation protein; R	90.57
PRK14088		440	dnaA chromosomal replication initiation protein; P	90.47
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	90.39
KOG0249		916	consensus LAR-interacting protein and related prot	90.2
PF06785		401	UPF0242: Uncharacterised protein family (UPF0242);	90.19
PF11559		151	ADIP: Afadin- and alpha -actinin-Binding; InterPro	90.18
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	90.09
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	89.83
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	89.74
PRK14087		450	dnaA chromosomal replication initiation protein; P	89.27
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	89.18
PF15397		258	DUF4618: Domain of unknown function (DUF4618)	89.18
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	89.11
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	88.97
COG0593		408	DnaA ATPase involved in DNA replication initiation	88.89
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	88.67
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	88.64
PRK05642		234	DNA replication initiation factor; Validated	88.64
PF02456		369	Adeno_IVa2: Adenovirus IVa2 protein; InterPro: IPR	88.36
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	88.3
TIGR00631		655	uvrb excinuclease ABC, B subunit. This family is b	88.26
COG2804		500	PulE Type II secretory pathway, ATPase PulE/Tfp pi	88.2
PRK11281		1113	hypothetical protein; Provisional	88.06
COG1474		366	CDC6 Cdc6-related protein, AAA superfamily ATPase	87.97
PRK12377		248	putative replication protein; Provisional	87.96
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	87.68
TIGR00362		405	DnaA chromosomal replication initiator protein Dna	87.63
PF07111		739	HCR: Alpha helical coiled-coil rod protein (HCR);	87.57
PF00769		246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	87.49
PF14988		206	DUF4515: Domain of unknown function (DUF4515)	87.48
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	87.46
PRK08116		268	hypothetical protein; Validated	87.1
PF15294		278	Leu_zip: Leucine zipper	87.09
PRK06526		254	transposase; Provisional	87.02
KOG1853		333	consensus LIS1-interacting protein NUDE [Cytoskele	86.99
PRK08727		233	hypothetical protein; Validated	86.98
PF04851		184	ResIII: Type III restriction enzyme, res subunit;	86.97
PRK00411		394	cdc6 cell division control protein 6; Reviewed	86.96
PRK08084		235	DNA replication initiation factor; Provisional	86.82
KOG0979		1072	consensus Structural maintenance of chromosome pro	86.74
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	86.59
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	86.19
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	86.02
TIGR03420		226	DnaA_homol_Hda DnaA regulatory inactivator Hda. Me	85.88
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	85.86
PF00769		246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	85.85
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	85.84
COG5008		375	PilU Tfp pilus assembly protein, ATPase PilU [Cell	85.73
PRK07952		244	DNA replication protein DnaC; Validated	85.65
cd00009		151	AAA The AAA+ (ATPases Associated with a wide varie	85.51
KOG1853		333	consensus LIS1-interacting protein NUDE [Cytoskele	85.39
PRK08903		227	DnaA regulatory inactivator Hda; Validated	85.37
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	85.34
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	85.32
TIGR02928		365	orc1/cdc6 family replication initiation protein. M	85.11
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	84.99
COG2433		652	Uncharacterized conserved protein [Function unknow	84.96
PF05911		769	DUF869: Plant protein of unknown function (DUF869)	84.66
PF13245		76	AAA_19: Part of AAA domain	84.38
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	84.27
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	83.92
PF15450		531	DUF4631: Domain of unknown function (DUF4631)	83.45
PF08614		194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	83.36
PF15450		531	DUF4631: Domain of unknown function (DUF4631)	83.33
PRK08181		269	transposase; Validated	83.04
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	83.04
KOG4809		654	consensus Rab6 GTPase-interacting protein involved	82.84
TIGR03017		444	EpsF chain length determinant protein EpsF. Sequen	82.38
PRK13729		475	conjugal transfer pilus assembly protein TraB; Pro	82.31
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	82.28
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	82.27
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	82.22
COG1223		368	Predicted ATPase (AAA+ superfamily) [General funct	81.81
PRK06835		329	DNA replication protein DnaC; Validated	81.68
smart00053		240	DYNc Dynamin, GTPase. Large GTPases that mediate v	81.65
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	81.65
PRK10436		462	hypothetical protein; Provisional	81.38
PRK08939		306	primosomal protein DnaI; Reviewed	81.37
KOG4360		596	consensus Uncharacterized coiled coil protein [Fun	80.93
PRK12422		445	chromosomal replication initiation protein; Provis	80.71
COG1382		119	GimC Prefoldin, chaperonin cofactor [Posttranslati	80.64
TIGR02533		486	type_II_gspE general secretory pathway protein E.	80.57
KOG1103		561	consensus Predicted coiled-coil protein [Function	80.5
PF08232		134	Striatin: Striatin family; InterPro: IPR013258 Thi	80.49
TIGR01420		343	pilT_fam pilus retraction protein PilT. This model	80.47
PF13401		131	AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S	80.38
TIGR02538		564	type_IV_pilB type IV-A pilus assembly ATPase PilB.	80.19

>KOG0244 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

Probab=100.00  E-value=3e-110  Score=978.55  Aligned_cols=821  Identities=42%  Similarity=0.583  Sum_probs=705.7

Q ss_pred             eCCCCCchhccCCcceEEEeCCCCceeecC-ceeEeceecCCCCCChHHHHHHhhHhHHHHhhcCCCccEEEecccCCCc
Q 001617           17 VRPLIGDERAQGCKDCVAVVPGKPQVQIGT-HSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGK   95 (1044)
Q Consensus        17 vRP~~~~E~~~~~~~~v~~~~~~~~v~~~~-~~F~FD~Vf~~~~s~q~~vy~~~~~plv~~~l~G~n~ti~aYGqtgSGK   95 (1044)
                      |||+...|..+||..|+.+.|+.|+|.++. .+|+||+||++. +.|.++|+.||.|+++.+|.|||+||+|||||||||
T Consensus         1 vRpl~~~e~~~g~~~c~~~~~~~pqv~ig~~~s~t~d~v~~~~-~~Q~~~~e~~V~~l~~~lf~gynatvlaygQtgsgk   79 (913)
T KOG0244|consen    1 VRPLKQMEEEQGCRRCTEVSPRTPQVAIGKDASFTYDKVFLDL-ESQKEVYESCVRPLREKLFAGYNATVLAYGQTGSGK   79 (913)
T ss_pred             CCCccchHHHhcchhhcccCCCCCceeecCCcceeeeeeccCc-hHHHHHHHHHHHHHHHHHhhhhcceeeeecccCCCc
Confidence            799999999999999999999999999875 689999999965 559999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCc-ccHhHHHHHHHHHHhhhccCceEEEEEehhhhhhhHHhhcCCCCCCCCCCCCCCCCCcccCCCCC
Q 001617           96 TYTMGTGFKDGYQT-GIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKP  174 (1044)
Q Consensus        96 T~Tm~g~~~~~~~~-Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~  174 (1044)
                      ||||++++...... |+|||++.++|.+|..... ..|.|+|||+|||++.|+|||.|..                 .+.
T Consensus        80 Tytmgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~-~~f~i~vs~vely~e~v~dl~~~~~-----------------~~~  141 (913)
T KOG0244|consen   80 TYTMGTNDAPAQDTVGVIPRAVSTLFTRIGKTES-FVFRITVSFVELYNEEVLDLLKPSR-----------------LKA  141 (913)
T ss_pred             eeecccccccccccCCcCcchHHHHHHHHHhhhc-cceeeeeeeeeccchhhhhhcChhh-----------------hhh
Confidence            99999986654444 9999999999999998654 7899999999999999999998643                 133


Q ss_pred             CceEEecCCCcEEEcCceEEEeCCHHHHHHHHHHhhcccccccCCCCCCCCCceeEEEEEEEEEeccCCCCCCCCCCCCC
Q 001617          175 PIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNES  254 (1044)
Q Consensus       175 ~l~ire~~~~~~~v~gl~e~~V~s~~e~~~~l~~g~~~R~~~st~~n~~SSRSH~ifti~v~q~~~~~~~~~~~~~~~~~  254 (1044)
                      ++.+++ +.|++.+.|+++++|.+..++..+|..|...|++++|+||..|||||+||||++++......           
T Consensus       142 ~i~~~e-~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~~-----------  209 (913)
T KOG0244|consen  142 NIKLRE-PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLSK-----------  209 (913)
T ss_pred             ceeccc-cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhhc-----------
Confidence            488888 88999999999999999999999999999999999999999999999999999998766442           


Q ss_pred             CCcceEEeEEEEEecCCCcccccCCChhhHHHHHHHHHhhhHHHHHHHHHhhcccCCCCCCcccCCCCcccccccccCCC
Q 001617          255 MNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGG  334 (1044)
Q Consensus       255 ~~~~~~~s~L~~VDLAGsEr~~~t~~~g~r~~E~~~IN~SL~~L~~vI~aL~~~~~~~~~~~iPyRdSkLTrlLq~~Lgg  334 (1044)
                        ...++++|||||||||||.++|++.|.|++||++||.+|++||+||+||++.++   ++|||||||||||||||+|||
T Consensus       210 --~s~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk---~~~vpyRdSkltrlLQdslgG  284 (913)
T KOG0244|consen  210 --RSSFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKK---GGEVPYRDSKLTRLLQDSLGG  284 (913)
T ss_pred             --cchhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhc---CCcccchHHHHHHHHHHHhcC
Confidence              336789999999999999999999999999999999999999999999999876   679999999999999999999


Q ss_pred             CcceEEEeccccccccccccCCCcccHHHHHHHHHHHHHhhccccccccccCcccHHHHHHHHHHHHHHHHHHHcCCCCC
Q 001617          335 NSRTVMIGNLFILKFDLSCISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSS  414 (1044)
Q Consensus       335 ns~t~~I~~~~~~~~~~~~vsp~~~~~~eTl~TL~~a~ra~~i~~kp~vn~d~~~~ei~kLr~qi~~L~~eL~~~~~~~~  414 (1044)
                      |+.|+||          +||||+++|+.||++||+||+||++|+|+|++|.||...++..|+.+|+.|+.+|....+...
T Consensus       285 ns~tlmi----------aCiSpadsn~~EtlnTl~ya~Rak~iknk~vvN~d~~~~~~~~lK~ql~~l~~ell~~~~~~~  354 (913)
T KOG0244|consen  285 NSDTLMI----------ACISPADSNAQETLNTLRYADRAKQIKNKPVVNQDPKSFEMLKLKAQLEPLQVELLSKAGDEL  354 (913)
T ss_pred             Ccceeee----------eecChhhhhhhhHHHHHHHhhHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9999999          999999999999999999999999999999999999999999999999999999976554445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhcC-CCCcccHHHHHHHhh------------hhhcccc
Q 001617          415 SDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDG-SPCPLKSDGLKRSLN------------SIEQTDY  481 (1044)
Q Consensus       415 ~~e~~~L~e~i~~Le~en~~L~~eL~~~~e~~a~l~~~~~~~~~~-~~l~~k~~eLe~~L~------------~~~~~~~  481 (1044)
                      ..++..+..++..++..+..+..++++....+.....+...++.. .++...+......+.            .+...-.
T Consensus       355 ~~ei~sl~~e~~~l~~~~d~~~~e~~e~~s~~s~~~~~~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~  434 (913)
T KOG0244|consen  355 DAEINSLPFENVTLEETLDALLQEKGEERSTLSSKSLKLTGAEKEKDKLRRRTDSCMNLLSEDSNEDASDKSASLPKPLE  434 (913)
T ss_pred             hhHHhhhhhhhhhhhhhHHHHhcchhhhhhhhhHHHHhcchhhhhHHHHHHHHHHHHHHHHHhHhHHhhhccccCCcccc
Confidence            578899999999999999999999888887775544433322211 111111111100000            0111111


Q ss_pred             ccccc-------CC--CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--chHHHHHHHHHHHHHH
Q 001617          482 QMGEN-------IT--GDSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGS--DTAALKQHFGKKIAEL  550 (1044)
Q Consensus       482 ~~~e~-------~~--~~~~e~~e~~~e~e~~~~q~~l~~el~eL~~~Le~kE~e~~~l~~~--e~~~lk~~~e~ki~eL  550 (1044)
                      +++..       ..  +++.........+++...+.++..++.+++++|+.||..++.+...  ....++++|+.++..|
T Consensus       435 ~v~~~~~e~~~~~~~~~~e~~~~~~~~~~~~~~~q~~ls~el~el~k~l~~Ke~l~rr~~~~~~~~~~~~~~~e~~~~~l  514 (913)
T KOG0244|consen  435 PVDSGTEEIGMNTDTSGDEAAEKELSETIGHPQKQGSLSGELSELEKRLAEKEPLTRRKAYEKAEKSKAKEQYESDSGTL  514 (913)
T ss_pred             ccccccccccccccCCCchhhhcccccCccchHHHhhhhHHHHHHHhhhccccHHHHHHHHhhhhhhHHHHHHhhhhhhH
Confidence            11110       01  1111112224567788889999999999999999999999998753  5677899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 001617          551 EDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQF  630 (1044)
Q Consensus       551 e~ei~~l~~e~~~L~~el~~~~~~~~~~~~kl~~~~e~kl~eLe~ql~~L~~k~e~~~~l~k~k~k~Ee~~~~Le~ei~~  630 (1044)
                      +.++..++.|++.+..++...    ...+.++.+.+.++++.|+.++++|+++...+..|.+.+.+.+.....|..+|..
T Consensus       515 e~e~~~le~E~~~l~~el~~~----~~~~~kl~eer~qklk~le~q~s~lkk~l~~~~~l~~~~~~~~~~~~kl~~ei~~  590 (913)
T KOG0244|consen  515 EAEKSPLESERSRLRNELNVF----NRLAAKLGEERVQKLKSLETQISLLKKKLSSQRKLIKPKPKSEGIRAKLLQEIHI  590 (913)
T ss_pred             HHHhcccccccHHHHHHHHhh----hHHHHHhhhHHHHHHHHHHHHHHHHHHhhHHHHHHhccchhhHHHHHHHHHHHHH
Confidence            999999999999999999998    3388999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001617          631 IKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRK  710 (1044)
Q Consensus       631 ~K~~k~~l~rkl~~e~~~~r~~k~~~eke~~qLk~e~~k~e~el~~Lq~~~e~q~~vlkrk~eE~~a~~k~Lke~le~~k  710 (1044)
                      +|.++++|+++|+++.+.|+.|++..+|++.+++.+.++.++++..++....++..+|+++++|+.+++++|++.+..++
T Consensus       591 ~k~~kv~l~~~~~~d~ekfr~~K~~~~Ke~~qlk~~~rk~~~~~~~~~~l~~~q~~vl~~kt~eas~~~krlk~a~~~r~  670 (913)
T KOG0244|consen  591 AKGQKVQLLRVMKEDAEKFRQWKDRTEKEWNQLKGQERKSEGEHPKLEVLVKKQNYVLQRKTEEASAANKRLKEALCIRA  670 (913)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhccchhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhh-ccccccccCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhcCCCCcCcc
Q 001617          711 SSA-RENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGK  789 (1044)
Q Consensus       711 ~~~-r~~~~~~~~~~~~~~~~~~~~r~~l~~ElE~~~~l~e~~~~~~~~~e~r~kl~~El~~L~~~~e~~~~~~~~~~~~  789 (1044)
                      ... .....+.      ......+...|+++|+|++..+.+++..+..+.+.|+.+..++..++.+.             
T Consensus       671 ~~~s~~~~~~~------~~~~~~~~~~~~~~e~ei~~~~~~~~~~l~~~~~~ra~~~~d~~~~r~~~-------------  731 (913)
T KOG0244|consen  671 LTSSGQVTLGD------NGASTSRTVAWPSNEIEINQIALNPRGTLLYAAEERAVRMWDLKRLRSEG-------------  731 (913)
T ss_pred             hcCCCccchhh------cCchhHHHHHHhccchHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence            552 2222212      22566778999999999999999999999999999999999999986542             


Q ss_pred             ccchhhccCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhcccchhhhhccHHHHHHHHHHHHHHHHHHHH
Q 001617          790 NGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARC  869 (1044)
Q Consensus       790 ~~~~~~~~l~~~~~~~qi~eLe~~~~~~~~~~~~l~~~l~e~e~~~~~~~~~~~~~~~rsl~eak~~L~~l~~~~~~~r~  869 (1044)
                                    ...|..|+.++...+.+|++|...+..++.+.+.+   .+|+++.++.+|++.+.++++.++..++
T Consensus       732 --------------~k~l~~L~~~~~~~~~~i~s~~~~i~~a~~d~~~~---~~w~~v~t~~~ak~~~~~~~~~~~~~r~  794 (913)
T KOG0244|consen  732 --------------KKLLGSLEPVMELTSDQISSMQDLIITASKDERIK---MRWEAVGTLSEAKNFEPYLYDGIVALRI  794 (913)
T ss_pred             --------------HHHHhhhHHHHHHHHHHHHhHHhhhcccccchhHH---HHHhcccccccchhhhHHHHHHHHHHHH
Confidence                          36889999999999999999999999998877644   3999999999999999999999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001617          870 QLWE-------KDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASG  923 (1044)
Q Consensus       870 ql~e-------~~~~l~e~k~~~~el~~~l~~~e~e~~~l~~~l~~~e~~~~~l~~~~~~~  923 (1044)
                      +...       ....+.++..++.+....++..+.+......+.....+.+..+.....+.
T Consensus       795 ~~~~~~~~~re~~~~~~~l~~kl~~~q~~~rk~e~~~~~~v~e~~~~~~~~~~~~~~~~~~  855 (913)
T KOG0244|consen  795 QGDNLFSGSREKGIKKWDLTQKLLDEQVNLRKDEVQALGVVPEHPVLLSGCKGGILKVWQM  855 (913)
T ss_pred             HHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            8774       44556677777766666677777777777777777777777777666554

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0245 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG4280 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	Back alignment and domain information

>PLN03188 kinesin-12 family protein; Provisional	Back alignment and domain information

>KOG0241 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0242 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup	Back alignment and domain information

>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup	Back alignment and domain information

>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup	Back alignment and domain information

>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins	Back alignment and domain information

>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division	Back alignment and domain information

>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily	Back alignment and domain information

>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins	Back alignment and domain information

>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group	Back alignment and domain information

>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup	Back alignment and domain information

>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup	Back alignment and domain information

>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling	Back alignment and domain information

>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis	Back alignment and domain information

>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	Back alignment and domain information

>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins	Back alignment and domain information

>KOG0246 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>smart00129 KISc Kinesin motor, catalytic domain	Back alignment and domain information

>KOG0247 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport	Back alignment and domain information

>cd00106 KISc Kinesin motor domain	Back alignment and domain information

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01363 Motor_domain Myosin and Kinesin motor domain	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair]	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>PF15066 CAGE1: Cancer-associated gene protein 1 family	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>PF15066 CAGE1: Cancer-associated gene protein 1 family	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]	Back alignment and domain information

>PF14988 DUF4515: Domain of unknown function (DUF4515)	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>KOG1937 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair]	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PRK06893 DNA replication initiation factor; Validated	Back alignment and domain information

>PRK06620 hypothetical protein; Validated	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>KOG1850 consensus Myosin-like coiled-coil protein [Cytoskeleton]	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG1937 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK09087 hypothetical protein; Validated	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>PRK14086 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>PRK00149 dnaA chromosomal replication initiation protein; Reviewed	Back alignment and domain information

>PRK14088 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only]	Back alignment and domain information

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function	Back alignment and domain information

>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK14087 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF15397 DUF4618: Domain of unknown function (DUF4618)	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>PRK05642 DNA replication initiation factor; Validated	Back alignment and domain information

>PF02456 Adeno_IVa2: Adenovirus IVa2 protein; InterPro: IPR003389 Va2 protein can interact with the adenoviral packaging signal and this interaction involves DNA sequences that have previously been demonstrated to be required for packaging []	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>TIGR00631 uvrb excinuclease ABC, B subunit	Back alignment and domain information

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK12377 putative replication protein; Provisional	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>TIGR00362 DnaA chromosomal replication initiator protein DnaA	Back alignment and domain information

>PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins	Back alignment and domain information

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []	Back alignment and domain information

>PF14988 DUF4515: Domain of unknown function (DUF4515)	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PRK08116 hypothetical protein; Validated	Back alignment and domain information

>PF15294 Leu_zip: Leucine zipper	Back alignment and domain information

>PRK06526 transposase; Provisional	Back alignment and domain information

>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]	Back alignment and domain information

>PRK08727 hypothetical protein; Validated	Back alignment and domain information

>PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3	Back alignment and domain information

>PRK00411 cdc6 cell division control protein 6; Reviewed	Back alignment and domain information

>PRK08084 DNA replication initiation factor; Provisional	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PRK07952 DNA replication protein DnaC; Validated	Back alignment and domain information

>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold	Back alignment and domain information

>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]	Back alignment and domain information

>PRK08903 DnaA regulatory inactivator Hda; Validated	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>TIGR02928 orc1/cdc6 family replication initiation protein	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>COG2433 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants	Back alignment and domain information

>PF13245 AAA_19: Part of AAA domain	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF15450 DUF4631: Domain of unknown function (DUF4631)	Back alignment and domain information

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>PF15450 DUF4631: Domain of unknown function (DUF4631)	Back alignment and domain information

>PRK08181 transposase; Validated	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>TIGR03017 EpsF chain length determinant protein EpsF	Back alignment and domain information

>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]	Back alignment and domain information

>PRK06835 DNA replication protein DnaC; Validated	Back alignment and domain information

>smart00053 DYNc Dynamin, GTPase	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>PRK10436 hypothetical protein; Provisional	Back alignment and domain information

>PRK08939 primosomal protein DnaI; Reviewed	Back alignment and domain information

>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]	Back alignment and domain information

>PRK12422 chromosomal replication initiation protein; Provisional	Back alignment and domain information

>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>TIGR02533 type_II_gspE general secretory pathway protein E	Back alignment and domain information

>KOG1103 consensus Predicted coiled-coil protein [Function unknown]	Back alignment and domain information

>PF08232 Striatin: Striatin family; InterPro: IPR013258 This domain is associated with the N terminus of striatin	Back alignment and domain information

>TIGR01420 pilT_fam pilus retraction protein PilT	Back alignment and domain information

>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B	Back alignment and domain information

>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB	Back alignment and domain information

Homologous Structure Templates