Citrus Sinensis ID: 001657
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1036 | ||||||
| 255585095 | 1028 | Chromosome-associated kinesin KLP1, puta | 0.990 | 0.998 | 0.811 | 0.0 | |
| 296082375 | 1032 | unnamed protein product [Vitis vinifera] | 0.993 | 0.997 | 0.814 | 0.0 | |
| 359480793 | 1031 | PREDICTED: chromosome-associated kinesin | 0.992 | 0.997 | 0.814 | 0.0 | |
| 255538224 | 1067 | Kinesin heavy chain, putative [Ricinus c | 0.990 | 0.961 | 0.788 | 0.0 | |
| 302142281 | 1077 | unnamed protein product [Vitis vinifera] | 0.994 | 0.956 | 0.790 | 0.0 | |
| 359492582 | 1071 | PREDICTED: chromosome-associated kinesin | 0.992 | 0.959 | 0.792 | 0.0 | |
| 147790676 | 1094 | hypothetical protein VITISV_001140 [Viti | 0.993 | 0.940 | 0.777 | 0.0 | |
| 224096722 | 1036 | predicted protein [Populus trichocarpa] | 0.998 | 0.998 | 0.796 | 0.0 | |
| 449447023 | 1050 | PREDICTED: chromosome-associated kinesin | 0.989 | 0.976 | 0.770 | 0.0 | |
| 224067254 | 1055 | predicted protein [Populus trichocarpa] | 0.988 | 0.970 | 0.765 | 0.0 |
| >gi|255585095|ref|XP_002533253.1| Chromosome-associated kinesin KLP1, putative [Ricinus communis] gi|223526909|gb|EEF29115.1| Chromosome-associated kinesin KLP1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1736 bits (4497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 838/1033 (81%), Positives = 934/1033 (90%), Gaps = 7/1033 (0%)
Query: 4 ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSA 63
ASENCSVKVAVH+RPLIGDER QGCKEC VT G PQVQIGTHSFTFD VYGNGGSPSS+
Sbjct: 3 ASENCSVKVAVHIRPLIGDERIQGCKECTTVTPGKPQVQIGTHSFTFDSVYGNGGSPSSS 62
Query: 64 MFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIE 123
MF ECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGT LR+G QTGLIPQVM ALFNKIE
Sbjct: 63 MFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTSLRDGCQTGLIPQVMKALFNKIE 122
Query: 124 TLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNG 183
L++Q EFQLHVSFIEILKEEVRDLLDSVS+SKS+ ANGH+GKVS+ GRPPIQIRESSNG
Sbjct: 123 KLKYQTEFQLHVSFIEILKEEVRDLLDSVSLSKSMPANGHSGKVSVPGRPPIQIRESSNG 182
Query: 184 VITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243
VITL+GSTEVAVNTL+EMA CLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHS+
Sbjct: 183 VITLSGSTEVAVNTLKEMAGCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSI 242
Query: 244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 303
SP N TPDEDM EEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA
Sbjct: 243 SPVNDTPDEDMGEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 302
Query: 304 LGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRA 363
LGDEKKR+EGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEE+LNTLKYANRA
Sbjct: 303 LGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRA 362
Query: 364 RNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNED 423
RNIQNKPVVNRDLIS+++Q++RQQLKYLQAELCAR GG+P DEVQ LK RIAWLEATNED
Sbjct: 363 RNIQNKPVVNRDLISNEVQQMRQQLKYLQAELCARGGGSPPDEVQALKERIAWLEATNED 422
Query: 424 LCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDGNSSE 483
L +ELHE+RSR AVV+ C D+QEG SF K DGLKRGFQS+DSSDYQ+DE VS +S E
Sbjct: 423 LSRELHEHRSRCAVVDQCEIDSQEGHASFTKCDGLKRGFQSMDSSDYQLDEDVSGESSGE 482
Query: 484 IEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEE 543
I+E AKEWEHAL ++TMDKEL ELN+RLEQKESEMKLFG +DTE+L+ HF KKIMELEEE
Sbjct: 483 IDEAAKEWEHALIRSTMDKELIELNRRLEQKESEMKLFGGVDTESLKQHFRKKIMELEEE 542
Query: 544 KRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQ 603
KRIVQQERDRLLAEIEN AANSDG TQK Q+ H+ KLKALEAQIL+LK+KQESQVELLKQ
Sbjct: 543 KRIVQQERDRLLAEIENRAANSDGQTQKAQESHSQKLKALEAQILDLKRKQESQVELLKQ 602
Query: 604 KHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFE 663
K +S+EAAKRLQAEIQ IKAQKVQLQ++IKQE+EQFRQW+ASREKE+L+L+KEGR+NE+E
Sbjct: 603 KQRSEEAAKRLQAEIQHIKAQKVQLQHRIKQESEQFRQWRASREKEVLQLRKEGRRNEYE 662
Query: 664 RHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNSTGYTTPTGQSNEK 723
RHKLEAL+QRQK++LQRKTEEAA+AT+RLKELLEARKSSA E S NS G+T+ + Q N+K
Sbjct: 663 RHKLEALHQRQKLILQRKTEEAAMATRRLKELLEARKSSACETSANSNGHTS-SSQVNDK 721
Query: 724 SLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGH 783
SLQ+WL+HELEV VHEVRF+YEKQ Q Q +A+EL +LKQVD+ P GKNGH
Sbjct: 722 SLQRWLDHELEVIMKVHEVRFQYEKQKQEQTVMAEELALLKQVDRF-----GPNEGKNGH 776
Query: 784 SRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGD 843
RLS +S NARMER+ASLENML++SS AL MASQLSEA +RER+L+GRG WN LR MG+
Sbjct: 777 PRLSVMSSNARMERVASLENMLSISSNALTAMASQLSEAGDRERSLIGRGHWNQLRSMGE 836
Query: 844 AKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQA 903
AKNLLQYMF A+E R QLW+KD E+K++K+QLN+LVALL++SEAQRKELVK+Q++REQA
Sbjct: 837 AKNLLQYMFTAASEARCQLWDKDMEMKDLKDQLNELVALLRESEAQRKELVKEQKLREQA 896
Query: 904 VTIALASSASQGSSWRSSKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQ 963
V IALA+S S G+S SSKH+ADD+SGPLSP+SLPAPKQLKF+PGIVNGSVRES AF+DQ
Sbjct: 897 VAIALATS-SLGNSRNSSKHYADDLSGPLSPISLPAPKQLKFSPGIVNGSVRESVAFIDQ 955
Query: 964 TRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIM 1023
TRKMVPVG +SMKKL TVGQ GKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIM
Sbjct: 956 TRKMVPVGQMSMKKLVTVGQTGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIM 1015
Query: 1024 KSRPRPQVLVDMM 1036
+SRPR L+DM+
Sbjct: 1016 RSRPRSLALIDMI 1028
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082375|emb|CBI21380.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359480793|ref|XP_002278379.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255538224|ref|XP_002510177.1| Kinesin heavy chain, putative [Ricinus communis] gi|223550878|gb|EEF52364.1| Kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|302142281|emb|CBI19484.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359492582|ref|XP_002282968.2| PREDICTED: chromosome-associated kinesin KIF4A-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147790676|emb|CAN61020.1| hypothetical protein VITISV_001140 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224096722|ref|XP_002310712.1| predicted protein [Populus trichocarpa] gi|222853615|gb|EEE91162.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449447023|ref|XP_004141269.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] gi|449523834|ref|XP_004168928.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224067254|ref|XP_002302432.1| predicted protein [Populus trichocarpa] gi|222844158|gb|EEE81705.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1036 | ||||||
| TAIR|locus:2160912 | 1035 | FRA1 "FRAGILE FIBER 1" [Arabid | 0.980 | 0.981 | 0.707 | 0.0 | |
| TAIR|locus:2074855 | 1051 | KICP-02 [Arabidopsis thaliana | 0.965 | 0.951 | 0.675 | 0.0 | |
| TAIR|locus:2173537 | 1294 | AT5G60930 [Arabidopsis thalian | 0.700 | 0.561 | 0.440 | 3e-144 | |
| MGI|MGI:109234 | 1668 | Kif21b "kinesin family member | 0.364 | 0.226 | 0.496 | 4.5e-108 | |
| UNIPROTKB|I3LPA4 | 1474 | KIF21B "Uncharacterized protei | 0.358 | 0.251 | 0.496 | 3.2e-105 | |
| UNIPROTKB|F1NUN8 | 1621 | KIF21B "Uncharacterized protei | 0.358 | 0.228 | 0.491 | 3.3e-105 | |
| UNIPROTKB|F1NA34 | 1662 | KIF21B "Uncharacterized protei | 0.358 | 0.223 | 0.491 | 3.8e-105 | |
| UNIPROTKB|O95239 | 1232 | KIF4A "Chromosome-associated k | 0.581 | 0.488 | 0.330 | 2.1e-104 | |
| UNIPROTKB|K7GQ60 | 1210 | KIF4A "Uncharacterized protein | 0.583 | 0.499 | 0.325 | 3.6e-104 | |
| UNIPROTKB|F1RTL0 | 1234 | KIF4A "Uncharacterized protein | 0.583 | 0.489 | 0.325 | 4.2e-104 |
| TAIR|locus:2160912 FRA1 "FRAGILE FIBER 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3704 (1308.9 bits), Expect = 0., P = 0.
Identities = 732/1034 (70%), Positives = 855/1034 (82%)
Query: 6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMF 65
++CSVKVAVH+RPLIGDER QGC++CV V G PQVQIG+HSFTFDHVYG+ GSPS+ M+
Sbjct: 8 DDCSVKVAVHIRPLIGDERIQGCQDCVTVVTGKPQVQIGSHSFTFDHVYGSSGSPSTEMY 67
Query: 66 GECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETL 125
EC APLVDGLFQGYNATVLAYGQTGSGKTYTMGTG + QTG+IPQVMNALF KIETL
Sbjct: 68 EECAAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGCGDSSQTGIIPQVMNALFTKIETL 127
Query: 126 RHQMEFQLHVSFIEILKEEVRDLLDXXXXXXXXTAN-GHAGKVS-ISGRPPIQIRESSNG 183
+ Q+EFQ+HVSFIEI KEEV+DLLD T N GH GKV+ + G+PPIQIRE+SNG
Sbjct: 128 KQQIEFQIHVSFIEIHKEEVQDLLDPCTVNKSDTNNTGHVGKVAHVPGKPPIQIRETSNG 187
Query: 184 VITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243
VITLAGSTEV+V+TL+EMAACL+QGS+SRATGSTNMNNQSSRSHAIFTIT+EQMRK+++
Sbjct: 188 VITLAGSTEVSVSTLKEMAACLDQGSVSRATGSTNMNNQSSRSHAIFTITVEQMRKINTD 247
Query: 244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 303
SP+NG + + EEY CAKLHLVDLAGSERAKRTGSDGLR KEG+HIN+GLLALGNVISA
Sbjct: 248 SPENGAYNGSLKEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISA 307
Query: 304 LGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRA 363
LGDEKKR++G HVPYRDSKLTRLLQDSLGGNS+TVMIACISPADINAEE+LNTLKYANRA
Sbjct: 308 LGDEKKRKDGAHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRA 367
Query: 364 RNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNED 423
RNI+NKPVVNRD +SS+M K+RQQ++YLQAEL R GG+ EVQ LK RI WLE NE+
Sbjct: 368 RNIRNKPVVNRDPVSSEMLKMRQQVEYLQAELSLRTGGSSCAEVQALKERIVWLETANEE 427
Query: 424 LCQELHEYRSRRAVVEHCGTDAQE----GPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDG 479
LC+ELHEYRSR VEH D ++ V V+ DGLKR SI+SS+Y M EA + G
Sbjct: 428 LCRELHEYRSRCPGVEHSEKDFKDIRADDIVGSVRPDGLKRSLHSIESSNYPMVEATT-G 486
Query: 480 NSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIME 539
+S EI+E AKEWEH L QN+MDKEL ELN+RLE+KESEMKLF D AL+ HFGKKI E
Sbjct: 487 DSREIDEEAKEWEHKLLQNSMDKELYELNRRLEEKESEMKLFDGYDPAALKQHFGKKIAE 546
Query: 540 LEEEKRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVE 599
+E+EKR VQ+ER+RLLAEIENLA SDG QK+QD H LKALEAQIL+LKKKQESQV+
Sbjct: 547 VEDEKRSVQEERNRLLAEIENLA--SDGQAQKLQDVHAQNLKALEAQILDLKKKQESQVQ 604
Query: 600 LLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASRXXXXXXXXXXGRK 659
LLKQK KSD+AA+RLQ EIQSIKAQKVQLQ+++KQEAEQFRQWKASR GRK
Sbjct: 605 LLKQKQKSDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQFRQWKASREKELLQLRKEGRK 664
Query: 660 NEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNSTGYTTPTGQ 719
+E+ERHKL+ALNQRQKMVLQRKTEEAA+ATKRLKELLEARKSS RE+S + G+ T GQ
Sbjct: 665 SEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSPREHSAGTNGFGT-NGQ 723
Query: 720 SNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRG 779
+NEKSLQ+WL+HELEV NVHEVR +YEKQS V+AALA+EL +L+QVD+ ++ G SP RG
Sbjct: 724 TNEKSLQRWLDHELEVMVNVHEVRHEYEKQSHVRAALAEELAVLRQVDEFAVKGLSPPRG 783
Query: 780 KNGHSRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLR 839
KNG +R SSLSPNARM RI+SLENML +SS +LV MASQLSEAEERERA RGRWN LR
Sbjct: 784 KNGFARASSLSPNARMARISSLENMLVISSNSLVAMASQLSEAEERERAFTNRGRWNQLR 843
Query: 840 FMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRM 899
MG+AKNLLQYMFN AETR QLWEKD EIKE+K+Q ++V LL+QSE +RKE K+ ++
Sbjct: 844 SMGEAKNLLQYMFNSLAETRCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRKEAEKELKL 903
Query: 900 REQAVTIXXXXXXXXXXXXXXXKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAA 959
REQA+ KH A+D+S P SP+++PA KQLKFTPGI NG VR AA
Sbjct: 904 REQAIA------TSLGTPPSSVKHVAEDLSTP-SPMTVPAQKQLKFTPGIANGKVRGPAA 956
Query: 960 FVDQTRKMVPVGHLSMKKLATVG-QPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHS 1018
F+D +KMVP+G +SM+KL+ VG Q G+LWRWKRSHHQW++QFKWKWQKPW+LSEWI+ S
Sbjct: 957 FLDTNKKMVPMGQVSMRKLSAVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRLSEWIRTS 1016
Query: 1019 DETIMKSRPRPQVL 1032
DET++KS+PR + L
Sbjct: 1017 DETLLKSKPRLKAL 1030
|
|
| TAIR|locus:2074855 KICP-02 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2173537 AT5G60930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:109234 Kif21b "kinesin family member 21B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3LPA4 KIF21B "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NUN8 KIF21B "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NA34 KIF21B "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O95239 KIF4A "Chromosome-associated kinesin KIF4A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|K7GQ60 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RTL0 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00019544001 | SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (1031 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1036 | |||
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 0.0 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-136 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-130 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-122 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 1e-108 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 1e-108 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-102 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 1e-100 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 4e-99 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 4e-99 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 3e-95 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 6e-86 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 2e-79 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 4e-76 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 1e-73 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 2e-67 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 2e-65 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 6e-64 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-37 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-10 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-10 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-08 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-08 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-06 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 3e-06 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 5e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-05 | |
| PRK05771 | 646 | PRK05771, PRK05771, V-type ATP synthase subunit I; | 3e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 6e-05 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 6e-05 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 8e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-04 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 3e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 4e-04 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 7e-04 | |
| PRK11448 | 1123 | PRK11448, hsdR, type I restriction enzyme EcoKI su | 8e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.002 | |
| TIGR03545 | 555 | TIGR03545, TIGR03545, TIGR03545 family protein | 0.002 | |
| COG3064 | 387 | COG3064, TolA, Membrane protein involved in colici | 0.002 | |
| COG4487 | 438 | COG4487, COG4487, Uncharacterized protein conserve | 0.003 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 0.003 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 0.004 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.004 |
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
Score = 564 bits (1456), Expect = 0.0
Identities = 218/364 (59%), Positives = 257/364 (70%), Gaps = 27/364 (7%)
Query: 8 CSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSSAMFG 66
SV+VAV VRPL+ E +GC+ CV+V G PQV +GT SFTFD+V+ S ++
Sbjct: 1 SSVRVAVRVRPLLPKELLEGCQVCVSVVPGEPQVTVGTDKSFTFDYVFDPSTSQE-EVYN 59
Query: 67 ECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGF---QTGLIPQVMNALFNKIE 123
CVAPLVDGLF+GYNATVLAYGQTGSGKTYTMGT + G+IP+ + +F KI+
Sbjct: 60 TCVAPLVDGLFEGYNATVLAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKID 119
Query: 124 TLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNG 183
+ + +FQL VSF+E+ EEVRDLL S S + PIQIRE S G
Sbjct: 120 EKKDEPDFQLKVSFLELYNEEVRDLLSP----------------STSEKSPIQIREDSKG 163
Query: 184 VITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243
I + G TEV VN+ QE+ +CLEQGSLSR T ST MN+QSSRSHAIFTITLEQ RK +
Sbjct: 164 NIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGPI 223
Query: 244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 303
+P +G D +K H VDLAGSER K+TG+ G RLKEGI IN GLLALGNVISA
Sbjct: 224 APMSG----DDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISA 279
Query: 304 LGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRA 363
LGDE K+ G HVPYRDSKLTRLLQDSLGGNS T+MIAC+SPAD N EE+LNTLKYANRA
Sbjct: 280 LGDESKK--GSHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNFEETLNTLKYANRA 337
Query: 364 RNIQ 367
RNI+
Sbjct: 338 RNIK 341
|
Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234252 TIGR03545, TIGR03545, TIGR03545 family protein | Back alignment and domain information |
|---|
| >gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|226889 COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1036 | |||
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 99.79 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.57 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 99.0 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 98.95 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 98.86 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 98.83 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 98.79 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.78 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 98.76 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.75 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 98.75 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 98.74 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 98.73 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 98.69 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.68 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 98.62 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 98.6 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 98.55 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 98.44 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 98.41 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 98.35 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 98.29 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 98.26 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 98.25 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 98.2 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 98.18 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.18 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.16 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 98.16 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 98.14 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.11 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 98.08 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 98.04 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 98.03 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 98.02 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 98.0 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 98.0 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 97.99 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 97.94 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 97.92 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 97.89 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.89 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 97.87 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 97.76 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 97.73 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 97.72 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 97.68 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 97.67 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.61 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 97.55 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 97.48 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 97.45 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.41 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 97.38 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.34 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 97.33 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.26 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 97.25 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 97.23 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 97.16 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 97.12 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 97.1 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.05 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 97.02 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 96.85 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 96.77 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 96.73 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 96.68 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 96.68 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.66 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 96.65 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.64 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 96.59 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.58 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 96.54 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 96.45 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 96.42 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 96.4 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 96.33 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 96.16 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 96.13 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 96.11 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 96.1 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 95.95 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 95.84 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 95.83 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.77 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 95.75 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.67 | |
| KOG0962 | 1294 | consensus DNA repair protein RAD50, ABC-type ATPas | 95.61 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 95.5 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.41 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.37 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.35 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 95.16 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 95.13 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 94.88 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 94.84 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 94.8 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 94.77 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 94.65 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 94.65 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 94.43 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 94.4 | |
| PRK09039 | 343 | hypothetical protein; Validated | 94.2 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 94.08 | |
| PRK09039 | 343 | hypothetical protein; Validated | 93.89 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 93.64 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 93.6 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 93.6 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 93.4 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 93.33 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 93.27 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 93.13 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 93.07 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 92.98 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 92.94 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 92.93 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 92.91 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 92.9 | |
| PF14988 | 206 | DUF4515: Domain of unknown function (DUF4515) | 92.87 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 92.79 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 92.11 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 91.66 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 91.48 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 91.23 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 91.23 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 91.08 | |
| PRK06620 | 214 | hypothetical protein; Validated | 91.04 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 90.92 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 90.79 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 90.74 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 90.67 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 90.5 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 90.32 | |
| PF13514 | 1111 | AAA_27: AAA domain | 90.12 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 89.81 | |
| PRK09087 | 226 | hypothetical protein; Validated | 89.7 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 89.64 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 89.63 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 89.61 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 89.28 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 89.25 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 89.21 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 89.05 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 88.96 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 88.85 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 88.84 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 88.83 | |
| KOG1850 | 391 | consensus Myosin-like coiled-coil protein [Cytoske | 88.82 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 88.78 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 88.48 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 88.46 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 88.29 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 88.16 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 88.02 | |
| PF15294 | 278 | Leu_zip: Leucine zipper | 87.27 | |
| PF14988 | 206 | DUF4515: Domain of unknown function (DUF4515) | 87.19 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 87.12 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 87.01 | |
| PRK08727 | 233 | hypothetical protein; Validated | 87.01 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 86.87 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 86.76 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 86.59 | |
| PRK13729 | 475 | conjugal transfer pilus assembly protein TraB; Pro | 86.53 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 86.23 | |
| KOG0962 | 1294 | consensus DNA repair protein RAD50, ABC-type ATPas | 86.16 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 86.13 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 85.95 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 85.87 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 85.82 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 85.62 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 85.4 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 85.33 | |
| PF09731 | 582 | Mitofilin: Mitochondrial inner membrane protein; I | 85.26 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 85.22 | |
| COG0593 | 408 | DnaA ATPase involved in DNA replication initiation | 85.14 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 85.09 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 84.91 | |
| PRK12377 | 248 | putative replication protein; Provisional | 84.83 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 84.8 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 84.75 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 84.52 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 84.36 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 83.99 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 83.94 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 83.85 | |
| TIGR00631 | 655 | uvrb excinuclease ABC, B subunit. This family is b | 83.64 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 83.55 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 83.34 | |
| PRK08116 | 268 | hypothetical protein; Validated | 83.33 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 83.2 | |
| PRK06526 | 254 | transposase; Provisional | 83.16 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 83.11 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 83.1 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 82.89 | |
| PF04912 | 388 | Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit | 82.68 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 82.65 | |
| PF04582 | 326 | Reo_sigmaC: Reovirus sigma C capsid protein; Inter | 82.48 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 82.43 | |
| COG5008 | 375 | PilU Tfp pilus assembly protein, ATPase PilU [Cell | 82.41 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 82.32 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 82.01 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 81.99 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 81.46 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 81.42 | |
| KOG4302 | 660 | consensus Microtubule-associated protein essential | 81.35 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 81.35 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 81.18 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 81.14 | |
| PF10212 | 518 | TTKRSYEDQ: Predicted coiled-coil domain-containing | 81.09 | |
| PRK10436 | 462 | hypothetical protein; Provisional | 80.92 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 80.81 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 80.45 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 80.36 | |
| TIGR02538 | 564 | type_IV_pilB type IV-A pilus assembly ATPase PilB. | 80.24 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 80.08 |
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-119 Score=1059.08 Aligned_cols=823 Identities=42% Similarity=0.571 Sum_probs=719.4
Q ss_pred eCCCCcchhccCCceEEEEeCCCceeeecc-eeEEcceeeCCCCCCccccccccchhhHHHhhcCCCccEeeeccCCCCc
Q 001657 16 VRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGK 94 (1036)
Q Consensus 16 vRP~~~~e~~~~~~~~v~v~~~~~~v~~~~-~~F~FD~Vf~~~~t~q~~vy~~~v~plV~~~l~G~N~ti~aYGqTgSGK 94 (1036)
|||+...|...||..|+.+.++.|+|.+++ .+|+||+||++. +.|..+|+.||.|+++.+|+|||+||+|||||||||
T Consensus 1 vRpl~~~e~~~g~~~c~~~~~~~pqv~ig~~~s~t~d~v~~~~-~~Q~~~~e~~V~~l~~~lf~gynatvlaygQtgsgk 79 (913)
T KOG0244|consen 1 VRPLKQMEEEQGCRRCTEVSPRTPQVAIGKDASFTYDKVFLDL-ESQKEVYESCVRPLREKLFAGYNATVLAYGQTGSGK 79 (913)
T ss_pred CCCccchHHHhcchhhcccCCCCCceeecCCcceeeeeeccCc-hHHHHHHHHHHHHHHHHHhhhhcceeeeecccCCCc
Confidence 799999999999999999999999999875 799999999876 459999999999999999999999999999999999
Q ss_pred ccccccCCCCCCcc-ccHHHHHHHHHHHHHhhcccceEEEEeehhhhhhhhhhhccCCcccccccccCCCCCccccCCCC
Q 001657 95 TYTMGTGLREGFQT-GLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRP 173 (1036)
Q Consensus 95 TyTm~G~~~~~~~~-Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~ 173 (1036)
||||++++...... |+|||++.++|..|..... ..|.|.|||+|||++.|+|||.|... ..
T Consensus 80 Tytmgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~-~~f~i~vs~vely~e~v~dl~~~~~~-----------------~~ 141 (913)
T KOG0244|consen 80 TYTMGTNDAPAQDTVGVIPRAVSTLFTRIGKTES-FVFRITVSFVELYNEEVLDLLKPSRL-----------------KA 141 (913)
T ss_pred eeecccccccccccCCcCcchHHHHHHHHHhhhc-cceeeeeeeeeccchhhhhhcChhhh-----------------hh
Confidence 99999987655444 9999999999999998654 78999999999999999999985431 23
Q ss_pred CceEEecCCCcEEEcCceEEEcCCHHHHHHHHHhcccCcccccCCCCCCCCCceeEEEEEEEeeeecccCCCCCCCCCCC
Q 001657 174 PIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDED 253 (1036)
Q Consensus 174 ~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~N~~SSRSH~Ifti~v~q~~~~~~~~~~~~~~~~~ 253 (1036)
++.+++ +.|++++.|+++++|.+..+++.+|..|...|++++|+||.+|||||+||||+++++.+...
T Consensus 142 ~i~~~e-~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~~----------- 209 (913)
T KOG0244|consen 142 NIKLRE-PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLSK----------- 209 (913)
T ss_pred ceeccc-cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhhc-----------
Confidence 478888 88999999999999999999999999999999999999999999999999999998655322
Q ss_pred CCcceEEeeeeeeecCCCccccccCCCcchhhhhhhhhhhhHHHHHHHHHhhhhccCCCCCcccCCCChhhhhhhccCCC
Q 001657 254 MDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGG 333 (1036)
Q Consensus 254 ~~~~~~~skL~~VDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrlLqdsLgG 333 (1036)
...++++|||||||||||.++|+++|.|++||++||.||++|||||++|++.++ ++|||||||+|||||||+|||
T Consensus 210 --~s~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk---~~~vpyRdSkltrlLQdslgG 284 (913)
T KOG0244|consen 210 --RSSFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKK---GGEVPYRDSKLTRLLQDSLGG 284 (913)
T ss_pred --cchhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhc---CCcccchHHHHHHHHHHHhcC
Confidence 226789999999999999999999999999999999999999999999999875 679999999999999999999
Q ss_pred CceeEEEeecCCCCCCHHHHHHHHHHHHHhhcccCccccccccchHHHHHHHHHHHHHHHHHhhhhCCCChHHHHHHHHH
Q 001657 334 NSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGR 413 (1036)
Q Consensus 334 ns~t~mI~~vSP~~~~~~eTl~TL~fa~rar~Ik~kpvvn~d~~~~ei~~Lr~ei~~Lq~eL~~~~~~~~~~e~~~L~ek 413 (1036)
|+.|+||+||||++.|+.||++||+||+||++|+|||+||.|+...+|..|+.+|+.|+.+|+...+....+++..+..+
T Consensus 285 ns~tlmiaCiSpadsn~~EtlnTl~ya~Rak~iknk~vvN~d~~~~~~~~lK~ql~~l~~ell~~~~~~~~~ei~sl~~e 364 (913)
T KOG0244|consen 285 NSDTLMIACISPADSNAQETLNTLRYADRAKQIKNKPVVNQDPKSFEMLKLKAQLEPLQVELLSKAGDELDAEINSLPFE 364 (913)
T ss_pred CcceeeeeecChhhhhhhhHHHHHHHhhHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHhhccccchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887665567899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhccccccCCC------------------c--ccccchhhhhccccccccchhhh
Q 001657 414 IAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGP------------------V--SFVKSDGLKRGFQSIDSSDYQMD 473 (1036)
Q Consensus 414 i~~L~~e~~~L~~eL~~~~~~la~~Ee~~~~~~~~~------------------~--~~~~~~~L~~~~~~l~~~~~~l~ 473 (1036)
+..++..+..+..++++.+..+..-..+...+.... . ...+...|.+.++++....+++.
T Consensus 365 ~~~l~~~~d~~~~e~~e~~s~~s~~~~~~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~v~~~~~e~~ 444 (913)
T KOG0244|consen 365 NVTLEETLDALLQEKGEERSTLSSKSLKLTGAEKEKDKLRRRTDSCMNLLSEDSNEDASDKSASLPKPLEPVDSGTEEIG 444 (913)
T ss_pred hhhhhhhHHHHhcchhhhhhhhhHHHHhcchhhhhHHHHHHHHHHHHHHHHHhHhHHhhhccccCCcccccccccccccc
Confidence 999999999999999888877743322221111000 0 00011124444444433212221
Q ss_pred hhhhc-CCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001657 474 EAVSD-GNSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGD--IDTEALRHHFGKKIMELEEEKRIVQQE 550 (1036)
Q Consensus 474 e~l~~-~~~~~~eee~~~~e~~~~q~kl~~El~eL~k~Le~kE~~~~~~~~--~~~~~~k~~~e~ki~~Le~ei~~lqkE 550 (1036)
..... +++.........+++...+.+|..++.+++++|++||..++++.. ......+++|+.++..|+.++..++.|
T Consensus 445 ~~~~~~~~e~~~~~~~~~~~~~~~q~~ls~el~el~k~l~~Ke~l~rr~~~~~~~~~~~~~~~e~~~~~le~e~~~le~E 524 (913)
T KOG0244|consen 445 MNTDTSGDEAAEKELSETIGHPQKQGSLSGELSELEKRLAEKEPLTRRKAYEKAEKSKAKEQYESDSGTLEAEKSPLESE 524 (913)
T ss_pred ccccCCCchhhhcccccCccchHHHhhhhHHHHHHHhhhccccHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHhcccccc
Confidence 11111 111111122456788889999999999999999999999988874 345678999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001657 551 RDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQN 630 (1036)
Q Consensus 551 rd~Ll~~l~~~~~~~~~~~~Kl~~~~~~~l~~LE~el~~L~~e~~~~~~L~K~K~K~E~~~~~L~~ei~~lk~~kv~L~r 630 (1036)
++.|..++... +....++.++|+++++.||.++..|+++...+..|.+.+.+.+.....|..+|..+|.++|+|++
T Consensus 525 ~~~l~~el~~~----~~~~~kl~eer~qklk~le~q~s~lkk~l~~~~~l~~~~~~~~~~~~kl~~ei~~~k~~kv~l~~ 600 (913)
T KOG0244|consen 525 RSRLRNELNVF----NRLAAKLGEERVQKLKSLETQISLLKKKLSSQRKLIKPKPKSEGIRAKLLQEIHIAKGQKVQLLR 600 (913)
T ss_pred cHHHHHHHHhh----hHHHHHhhhHHHHHHHHHHHHHHHHHHhhHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 33788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc
Q 001657 631 KIKQEAEQFRQWKASREKELLKLKKEGRKNEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNS 710 (1036)
Q Consensus 631 kmk~e~~~~~~~~~~~ekei~qLk~~~rK~e~Ei~~L~~~~~~q~~vLqRK~eE~~a~~krLke~Le~ek~~r~k~e~~~ 710 (1036)
+|++|+++|+.|++..+|+..||+.+.|+.++++..++..+.+|..||+|+++|+.++++||++++..++......-
T Consensus 601 ~~~~d~ekfr~~K~~~~Ke~~qlk~~~rk~~~~~~~~~~l~~~q~~vl~~kt~eas~~~krlk~a~~~r~~~~s~~~--- 677 (913)
T KOG0244|consen 601 VMKEDAEKFRQWKDRTEKEWNQLKGQERKSEGEHPKLEVLVKKQNYVLQRKTEEASAANKRLKEALCIRALTSSGQV--- 677 (913)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHhccchhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876522110
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcCCccccccCC
Q 001657 711 TGYTTPTGQSNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGHSRLSSLS 790 (1036)
Q Consensus 711 ~~~~~~~~~~~~~~~~~Wl~~ELE~l~~l~E~~~~~~~q~e~r~k~~~El~~Lk~~~e~~~~~~~~~~~~~~~~~~~~~~ 790 (1036)
..............|+.+|+|++..+.++++++.++++.|+.+.-++..|+...
T Consensus 678 ---~~~~~~~~~~~~~~~~~~e~ei~~~~~~~~~~l~~~~~~ra~~~~d~~~~r~~~----------------------- 731 (913)
T KOG0244|consen 678 ---TLGDNGASTSRTVAWPSNEIEINQIALNPRGTLLYAAEERAVRMWDLKRLRSEG----------------------- 731 (913)
T ss_pred ---chhhcCchhHHHHHHhccchHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 000111345678999999999999999999999999999999999999998721
Q ss_pred hhHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccccchhhccHHHHHHHHHHHHHHHHhHHHHHh-------
Q 001657 791 PNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLW------- 863 (1036)
Q Consensus 791 ~~~r~~qi~~Lq~~~~~~~~~~~~l~~ql~~~e~r~~~~~~k~r~~~i~s~~eak~~l~~l~~~~~~~~~ql~------- 863 (1036)
...|.+|+.++...+++|++|++++..++++.+.+. +|+++.++.+||+.+.++++..+..+++..
T Consensus 732 ----~k~l~~L~~~~~~~~~~i~s~~~~i~~a~~d~~~~~---~w~~v~t~~~ak~~~~~~~~~~~~~r~~~~~~~~~~r 804 (913)
T KOG0244|consen 732 ----KKLLGSLEPVMELTSDQISSMQDLIITASKDERIKM---RWEAVGTLSEAKNFEPYLYDGIVALRIQGDNLFSGSR 804 (913)
T ss_pred ----HHHHhhhHHHHHHHHHHHHhHHhhhcccccchhHHH---HHhcccccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 567899999999999999999999999987777666 999999999999999999999999998887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 001657 864 EKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIALASSASQ 914 (1036)
Q Consensus 864 E~~~k~~E~~~~~~el~~~~~~~~~e~~el~~~l~e~E~~~~~l~~~~~~~ 914 (1036)
+...++.++..++.+....+++.+++..++..+.....+.+..++....+.
T Consensus 805 e~~~~~~~l~~kl~~~q~~~rk~e~~~~~~v~e~~~~~~~~~~~~~~~~~~ 855 (913)
T KOG0244|consen 805 EKGIKKWDLTQKLLDEQVNLRKDEVQALGVVPEHPVLLSGCKGGILKVWQM 855 (913)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 788889999999999988999999999999999999999998888887664
|
|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF14988 DUF4515: Domain of unknown function (DUF4515) | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >KOG1850 consensus Myosin-like coiled-coil protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF15294 Leu_zip: Leucine zipper | Back alignment and domain information |
|---|
| >PF14988 DUF4515: Domain of unknown function (DUF4515) | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK13729 conjugal transfer pilus assembly protein TraB; Provisional | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >TIGR00631 uvrb excinuclease ABC, B subunit | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) [] | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >PF04582 Reo_sigmaC: Reovirus sigma C capsid protein; InterPro: IPR007662 Protein sigmaC in its native state was shown to be a homotrimer | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif | Back alignment and domain information |
|---|
| >PRK10436 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1036 | ||||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 6e-77 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 7e-74 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-69 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 2e-63 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 4e-62 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 8e-62 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 4e-61 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 1e-60 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 7e-60 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 8e-60 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 7e-59 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 7e-59 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-58 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-58 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 5e-58 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-58 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-57 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 5e-57 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 2e-56 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 2e-56 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 4e-56 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 4e-56 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 5e-56 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 5e-56 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 5e-56 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 6e-56 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 6e-55 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 9e-55 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 1e-49 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 9e-49 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-46 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 2e-45 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 3e-40 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 7e-40 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-39 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 2e-39 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 8e-39 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 2e-38 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 2e-38 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 5e-38 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 6e-38 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 6e-38 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 6e-38 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 2e-37 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 2e-37 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 2e-37 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-37 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 4e-37 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 9e-37 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-36 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-36 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 5e-36 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 6e-36 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 9e-36 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 4e-31 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 3e-29 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 1e-18 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 2e-17 |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
|
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1036 | |||
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 0.0 | |
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 1e-176 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 1e-174 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 1e-172 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 1e-171 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 1e-168 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 1e-167 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 1e-165 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 1e-165 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 1e-165 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 1e-165 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 1e-161 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 1e-160 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 1e-157 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 1e-152 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 1e-152 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 1e-151 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 1e-149 | |
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 1e-145 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 1e-144 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 1e-137 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 1e-137 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 1e-133 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 1e-132 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 1e-122 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 1e-122 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 3e-53 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 9e-53 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 3e-11 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 2e-09 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 2e-09 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-06 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 1e-10 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 3e-08 | |
| 1f5n_A | 592 | Interferon-induced guanylate-binding protein 1; GB | 1e-06 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 3e-06 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 8e-05 | |
| 2zuo_A | 861 | MVP, major vault protein; repeat domains, protein- | 2e-05 | |
| 2xs1_A | 704 | Programmed cell death 6-interacting protein; prote | 2e-04 |
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
Score = 534 bits (1378), Expect = 0.0
Identities = 161/365 (44%), Positives = 220/365 (60%), Gaps = 31/365 (8%)
Query: 4 ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSS 62
+E V+VA+ VRPL+ E G + C+ V G +V +G F F V +
Sbjct: 7 GAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGFHVVLAED-AGQE 65
Query: 63 AMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGF---QTGLIPQVMNALF 119
A++ CV PL++ F+G+NATV AYGQTGSGKTYTMG + G++P+ M F
Sbjct: 66 AVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAF 125
Query: 120 NKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRE 179
I+ ++ +HVS++E+ KEE RDLL+ + S+ IQ+RE
Sbjct: 126 KLIDE-NDLLDCLVHVSYLEVYKEEFRDLLEVGTASR-----------------DIQLRE 167
Query: 180 SSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRK 239
G + L G EV V L E+ + LE G+ +R TG+T++N+ SSRSH +FT+TLEQ +
Sbjct: 168 DERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGR 227
Query: 240 LHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGN 299
+ +K H VDLAGSER +TGS G RLKE I IN LLALGN
Sbjct: 228 ------APSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGN 281
Query: 300 VISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKY 359
VISALGD ++R G H+PYRDSK+TR+L+DSLGGN+KTVMIAC+SP+ + +E+LNTL Y
Sbjct: 282 VISALGDPQRR--GSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNY 339
Query: 360 ANRAR 364
A+RA+
Sbjct: 340 ASRAQ 344
|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1036 | ||||
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 9e-86 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 2e-82 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 3e-82 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 2e-81 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 1e-77 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 8e-74 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 2e-73 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 8e-70 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-62 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 1e-04 | |
| d1f5na1 | 300 | a.114.1.1 (A:284-583) Interferon-induced guanylate | 0.002 |
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Human (Homo sapiens) [TaxId: 9606]
Score = 277 bits (709), Expect = 9e-86
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 40/359 (11%)
Query: 8 CSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGE 67
C++KV RPL E +G K G V I + + FD V+ + ++ +
Sbjct: 5 CNIKVMCRFRPLNESEVNRGDKYIAKF-QGEDTVVIASKPYAFDRVFQ-SSTSQEQVYND 62
Query: 68 CVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRH 127
C +V + +GYN T+ AYGQT SGKT+TM L + G+IP+++ +FN I ++
Sbjct: 63 CAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDE 122
Query: 128 QMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITL 187
+EF + VS+ EI +++RDLLD + + + E N V +
Sbjct: 123 NLEFHIKVSYFEIYLDKIRDLLDVS-------------------KTNLSVHEDKNRVPYV 163
Query: 188 AGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDN 247
G TE V + E+ +++G +R TNMN SSRSH+IF I ++Q
Sbjct: 164 KGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQ----------- 212
Query: 248 GTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDE 307
+ E+ KL+LVDLAGSE+ +TG++G L E +IN+ L ALGNVISAL +
Sbjct: 213 ---ENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEG 269
Query: 308 KKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNI 366
+VPYRDSK+TR+LQDSLGGN +T ++ C SP+ N E+ +TL + RA+ I
Sbjct: 270 ST-----YVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 323
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
| >d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1036 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 93.09 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 89.06 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 83.04 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 82.08 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 82.02 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 80.19 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=647.92 Aligned_cols=346 Identities=35% Similarity=0.571 Sum_probs=311.9
Q ss_pred CEEEEEEECCCCCCHHCCCCCEEEEEECCCCEEEE----CCEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCE
Q ss_conf 63899982899960100499517998379860454----66258713355899887520001132226987533888527
Q 001657 9 SVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI----GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATV 84 (1036)
Q Consensus 9 ~v~V~vRvRP~~~~e~~~~~~~~~~v~~~~~~v~~----~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G~N~tI 84 (1036)
.|+|+|||||+.+.|...+...++.+......... ..+.|+||+||+++++ |.+||+. +.|+|+++++|||+||
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~-q~~vy~~-v~~lv~~~l~G~n~~i 78 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNAT-QDDVFED-TKYLVQSAVDGYNVCI 78 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCC-HHHHHHT-TTHHHHHHHTTCEEEE
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEECCCCCC-HHHHHHH-HHHHHHHHHCCCCEEE
T ss_conf 9699999278993662258987599679975873578998547778856499999-8999998-9999999966985035
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 63124787754202667889976664789999999999840135428999604432211664302785446644457888
Q 001657 85 LAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHA 164 (1036)
Q Consensus 85 layGqtgSGKTyTm~G~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~~~~ 164 (1036)
||||||||||||||+|+. .++|||||++.+||..+........|.|++||+|||||.|+|||.|...
T Consensus 79 ~aYGqTGSGKTyTm~G~~---~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~---------- 145 (364)
T d1sdma_ 79 FAYGQTGSGKTFTIYGAD---SNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA---------- 145 (364)
T ss_dssp EEECSTTSSHHHHHTBCS---SSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTS----------
T ss_pred ECCCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCC----------
T ss_conf 522347877620165676---6551367899998865531034655369999888723632233576545----------
Q ss_pred CCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCC
Q ss_conf 86445899991577569994897386489929999999999823547530357888899983469999998653035579
Q 001657 165 GKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVS 244 (1036)
Q Consensus 165 ~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q~~~~~~~~ 244 (1036)
....+.+++++.++++|.|++++.|.++++++.++..|..+|.+++|.+|..|||||+||+|++.+....
T Consensus 146 ------~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~---- 215 (364)
T d1sdma_ 146 ------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ---- 215 (364)
T ss_dssp ------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETT----
T ss_pred ------CCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCC----
T ss_conf ------5544331331467602035300011778897898640660004453435410333635999999970367----
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 99999998998535883255443589743234689862004546641535899999999511014789975568998023
Q 001657 245 PDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLT 324 (1036)
Q Consensus 245 ~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~IN~sL~aL~~vI~aL~~~~~~~~~~~iPyrdSkLT 324 (1036)
......++|+|||||||||..++++.|.+++|+.+||+||++|++||.+|+.+.+ |||||+||||
T Consensus 216 ----------~~~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~-----~ipyR~SkLT 280 (364)
T d1sdma_ 216 ----------TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQ-----HIPYRNHKLT 280 (364)
T ss_dssp ----------TCCEEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCS-----CCCGGGCHHH
T ss_pred ----------CCEEEEEEEEEECHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC-----CCCCHHHHHH
T ss_conf ----------6503567998404100352001466675023323356432068999999974997-----5773011213
Q ss_pred HHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 442101799950688753399888979899999999995033376543444424899999999999999994
Q 001657 325 RLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELC 396 (1036)
Q Consensus 325 rLLqdsLgGns~t~~I~~vSP~~~~~~ETl~TL~fa~rar~IKnkP~vn~d~~~~ei~~L~~Ei~~Lk~eL~ 396 (1036)
+||+|+|||||+|+|||||||+..+++||++||+||+||+.|+|+|.+|.+. .++..|++++..|+.++.
T Consensus 281 ~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~--~~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 281 MLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQAG 350 (364)
T ss_dssp HHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEEC--HHHHHHHTTTTCC-----
T ss_pred HHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHHHHHHHHHHH
T ss_conf 8878634999509999996987001899999999999984206678355798--999999999999999987
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| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
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| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
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| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
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| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
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| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
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| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
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| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
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| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
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