Citrus Sinensis ID: 001657


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------
MDTASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDGNSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEEKRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNSTGYTTPTGQSNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGHSRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIALASSASQGSSWRSSKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMKSRPRPQVLVDMM
ccccccccccEEEEEccccccHHHHccccEEEEEEccccEEEEccccccccEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEEEEEEEEccHHccccccccccccccccccccccccccccccEEEEcccccEEEccccEEEcccHHHHHHHHHHcccccccccccccccccccccEEEEEEEEEccccccccccccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccHHHHHHccccccccHHHHcccccccccEEccccccHHHHHHHHcHHHHHHcccccHHHHccc
cccccccccEEEEEEEccccHHHHHccccEEEEEEccccEEEEcccEEEEEEEEccccccHHHHHHHHcHHHHHHHHccccEEEEEEccccccHHHHHcEcccccccEcHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEccEEEEccccccccEcEccccccccccccccccEEEEEcccccEEEccccEEEEcccEEEcccccEEEccHHHHHHHHHHHHHHcccccccHHHHHHHcEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHcHHHHHcHHHcccccEEEEEEEEccEHHHHHHHHHHHHHHHHHHccEccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccHHHcccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHcccccccccccccccHHHHHHHHHHHcHHHHEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccHHHHHcHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccccHHcccccccccccccccHHHHHHcccccccccccHHHEEEEcccccEEEEEcccccEEEEEEEEccccccHHHHHHcccHHHcccccccHHHHHHc
mdtasencsvKVAVHvrpligderaqGCKECVAvthgnpqvqigthsftfdhvygnggspssamfgecVAPLVDGLFQGYNATVLAygqtgsgktytmgtglregfqtglIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSksvtanghagkvsisgrppiqiressngvitlAGSTEVAVNTLQEMAACLEQgslsratgstnmnnqssrsHAIFTITLEQMRKLhsvspdngtpdedmdeEYFCAKLHLVDlagserakrtgsdglrlkegiHINRGLLALGNVISALgdekkrregvhvpyrdskLTRLLQdslggnsktVMIACispadinaeESLNTLKYANRarniqnkpvvnrdlISSDMQKLRQQLKYLQAELCaraggapsdeVQVLKGRIAWLEATNEDLCQELHEYRSRRavvehcgtdaqegpvsfvksdglkrgfqsidssdyqmdeavsdgnsSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEEKRIVQQERDRLLAEIENLaansdghtqkmqdghTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSsarensvnstgyttptgqsnEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVdqlslnghspqrgknghsrlsslspnaRMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIALASsasqgsswrsskhfaddmsgplspvslpapkqlkftpgivngsvresaafvdqtrkmvpvghlsmkklatvgqpgklwrwkRSHHQWLLQFKWkwqkpwklsewikhsdetimksrprpqvlvdmm
mdtasencsvkvavhvrpligdERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSksvtanghagkvsisgrppiqiressnGVITLAGSTEVAVNTLQEMAACLEQGSLSRATgstnmnnqssrSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLvdlagserakrtgsdglrlkegihinrglLALGNVISAlgdekkrregvhvpyrdskltrllqdslggnsKTVMIACISPADINAEESLNTLKYAnrarniqnkpvvnrdLISSDMQKLRQQLKYLQAELCARaggapsdeVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHcgtdaqegpvsfvksdglkRGFQSIDSSDYQMDEAVSDGNSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEEKRIVQQERDRLLAEIENLaansdghtqkMQDGHTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKlkkegrkneferhklealnqrqkMVLQRKTEEAAIATKRLKELLEarkssarensvnstgyttptgqsNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLnghspqrgknghsrlsslspnaRMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIAlassasqgssWRSSKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSewikhsdetimksrprpqvlvdmm
MDTASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDsvsvsksvTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDGNSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEEKRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASRekellklkkeGRKNEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNSTGYTTPTGQSNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGHSRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIalassasqgsswrssKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMKSRPRPQVLVDMM
*******CSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSV****************************GVITLAGSTEVAVNTLQEMAACL***********************IFTITL**********************EYFCAKLHLVDLAG**********GLRLKEGIHINRGLLALGNVISALGD******GVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHCGT***********************************************WEHALWQ***********************FGDIDTEALRHHFGKKIM*********************************************************************************************************************************************************************************************WLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQV*************************************************************ALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALL***************************************************************PGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKH*******************
******N**VKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSV*AN***GKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRK******************YFCAKLHLVDLAGSERAK*****GLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLK******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************FMGDAKNLLQYMFN******************************************************************************************************************************************RSHHQWLLQFKWKWQKPWKLSEWIK***************LVDMM
********SVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQ*************EEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEEKRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQE*****************RLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEA**************************LQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGH***************SPNARMERIASLENMLNMSSKALV**************ALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQ************QAVTI********************DMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMKSRPRPQVLVDMM
*******CSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVT*N*HAGK*****RPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAG***********LRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQMD*****GNSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEEKRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFERHKLEALNQRQKMVLQRKTEEAAIA*******LE*R********************SNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQ*********************************ENMLNMSSKALVE**S*LSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIALAS******************SGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSD**I******PQV*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDTASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNxxxxxxxxxxxxxxxxxxxxxLCARAGGAPSDEVQVLKGRIAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDGNSSEIEEVAKEWEHALWxxxxxxxxxxxxxxxxxxxxxxxxxxxxDTEALRHHFGKKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxREKELLKxxxxxxxxxxxxxxxxxxxxxQKMVxxxxxxxxxxxxxxxxxxxxxRKSSARENSVNSTGYTTPTGQSNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGHSRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTExxxxxxxxxxxxxxxxxxxxxxxxxxxxQRMREQAVTIALASSASQGSSWRSSKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQTRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMKSRPRPQVLVDMM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1036 2.2.26 [Sep-21-2011]
O95239 1232 Chromosome-associated kin yes no 0.786 0.661 0.373 1e-138
Q91784 1226 Chromosome-associated kin N/A no 0.798 0.674 0.367 1e-135
P33174 1231 Chromosome-associated kin yes no 0.759 0.639 0.376 1e-133
Q2VIQ3 1234 Chromosome-associated kin no no 0.793 0.666 0.361 1e-129
Q90640 1225 Chromosome-associated kin yes no 0.793 0.671 0.364 1e-129
Q7Z4S6 1674 Kinesin-like protein KIF2 no no 0.364 0.225 0.496 1e-102
Q9QXL1 1668 Kinesin-like protein KIF2 no no 0.361 0.224 0.496 1e-101
O75037 1637 Kinesin-like protein KIF2 no no 0.364 0.230 0.491 1e-101
Q9QXL2 1672 Kinesin-like protein KIF2 no no 0.364 0.226 0.489 1e-100
Q86VH2 1401 Kinesin-like protein KIF2 no no 0.356 0.263 0.452 5e-89
>sp|O95239|KIF4A_HUMAN Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3 Back     alignment and function desciption
 Score =  491 bits (1265), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 356/952 (37%), Positives = 515/952 (54%), Gaps = 137/952 (14%)

Query: 10  VKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSSAMFGEC 68
           V+VA+  RPL+  E ++GC+ C++   G PQV +GT  SFT+D V+ +  +    +F   
Sbjct: 10  VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVF-DPSTEQEEVFNTA 68

Query: 69  VAPLVDGLFQGYNATVLAYGQTGSGKTYTMG---TGLREGFQT-GLIPQVMNALFNKIET 124
           VAPL+ G+F+GYNATVLAYGQTGSGKTY+MG   T  +E   T G+IP+V+  LF +I+ 
Sbjct: 69  VAPLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDK 128

Query: 125 LRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGV 184
            +   EF L VS++EI  EE+ DLL                      +  I IRE     
Sbjct: 129 -KSDFEFTLKVSYLEIYNEEILDLL-----------------CPSREKAQINIREDPKEG 170

Query: 185 ITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVS 244
           I + G TE  V    +  +CLEQG+ SR   ST MN+QSSRSHAIFTI+LEQ +K    S
Sbjct: 171 IKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKK----S 226

Query: 245 PDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISAL 304
             N +         F +KLHLVDLAGSER K+T ++G RLKEGI+INRGLL LGNVISAL
Sbjct: 227 DKNSS---------FRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISAL 277

Query: 305 GDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRAR 364
           GD+KK   G  VPYRDSKLTRLLQDSLGGNS T+MIAC+SPAD N EE+LNTL+YA+RAR
Sbjct: 278 GDDKK---GGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRAR 334

Query: 365 NIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGA--------PSDEVQVL------ 410
            I+NKP+VN D  ++++  L+QQ++ LQ  L    GG         PS+ +Q L      
Sbjct: 335 KIKNKPIVNIDPQTAELNHLKQQVQQLQVLLLQAHGGTLPGSITVEPSENLQSLMEKNQS 394

Query: 411 ---------KG-------------RIAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEG 448
                    +G             RI   E  NE +  +L E R   A    C  D Q+ 
Sbjct: 395 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAA----CKLDLQKL 450

Query: 449 PVSFVKSDGLKRGFQSI-----------DSSDYQMDEAVSDGNSSEIE-EVAKE------ 490
            V  ++   LK   + I           D +   M  A+      E + E + E      
Sbjct: 451 -VETLEDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSD 509

Query: 491 ---WEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDT--EALRHHFGKKIMELEEEKR 545
               +HAL Q  M KEL ELNK L  KE+  +     D+  + +++ +   I ELE E  
Sbjct: 510 AFTTQHALRQAQMSKELVELNKALALKEALARKMTQNDSQLQPIQYQYQDNIKELELEVI 569

Query: 546 IVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQKH 605
            +Q+E++ L+ E++   A  D +  K+ +    +L+ LE QI +LKKK   Q +LLK K 
Sbjct: 570 NLQKEKEELVLELQ--TAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKE 627

Query: 606 KSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFERH 665
            ++    +L  EI+ +K Q+VQL  ++K++AE+FRQWK  ++KE+++LK+  RK ++E  
Sbjct: 628 STERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELL 687

Query: 666 KLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSA-RENSVNSTGYTTPTGQSNEKS 724
           KLE   Q+Q  VL+RKTEEAA A KRLK+ L+ ++  A +     S G      +     
Sbjct: 688 KLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQREVADKRKETQSRGMEGTAAR----- 742

Query: 725 LQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGHS 784
           ++ WL +E+EV  +  E +        +   L D   + + V QL     S   G+N   
Sbjct: 743 VKNWLGNEIEVMVSTEEAK------RHLNDLLEDRKILAQDVAQLKEKKES---GENPPP 793

Query: 785 RLS-------------SLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVG 831
           +L              S S ++  ++I SLE  +   S  + ++  +L +AE  +R    
Sbjct: 794 KLRRRTFSLTEVRGQVSESEDSITKQIESLETEMEFRSAQIADLQQKLLDAESEDRP--- 850

Query: 832 RGRWNHLRFMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALL 883
           + RW ++  + +AK  L+Y+      ++ Q+ + ++ +K+ K    D+  +L
Sbjct: 851 KQRWENIATILEAKCALKYLIGELVSSKIQVSKLESSLKQSKTSCADMQKML 902




Motor protein that translocates PRC1 to the plus ends of interdigitating spindle microtubules during the metaphase to anaphase transition, an essential step for the formation of an organized central spindle midzone and midbody and for successful cytokinesis. May play a role in mitotic chromosomal positioning and bipolar spindle stabilization.
Homo sapiens (taxid: 9606)
>sp|Q91784|KIF4_XENLA Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1 Back     alignment and function description
>sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=3 Back     alignment and function description
>sp|Q2VIQ3|KIF4B_HUMAN Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=2 SV=2 Back     alignment and function description
>sp|Q90640|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1 Back     alignment and function description
>sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2 Back     alignment and function description
>sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2 Back     alignment and function description
>sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2 Back     alignment and function description
>sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2 Back     alignment and function description
>sp|Q86VH2|KIF27_HUMAN Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1036
2555850951028 Chromosome-associated kinesin KLP1, puta 0.990 0.998 0.811 0.0
2960823751032 unnamed protein product [Vitis vinifera] 0.993 0.997 0.814 0.0
3594807931031 PREDICTED: chromosome-associated kinesin 0.992 0.997 0.814 0.0
2555382241067 Kinesin heavy chain, putative [Ricinus c 0.990 0.961 0.788 0.0
3021422811077 unnamed protein product [Vitis vinifera] 0.994 0.956 0.790 0.0
3594925821071 PREDICTED: chromosome-associated kinesin 0.992 0.959 0.792 0.0
1477906761094 hypothetical protein VITISV_001140 [Viti 0.993 0.940 0.777 0.0
2240967221036 predicted protein [Populus trichocarpa] 0.998 0.998 0.796 0.0
4494470231050 PREDICTED: chromosome-associated kinesin 0.989 0.976 0.770 0.0
2240672541055 predicted protein [Populus trichocarpa] 0.988 0.970 0.765 0.0
>gi|255585095|ref|XP_002533253.1| Chromosome-associated kinesin KLP1, putative [Ricinus communis] gi|223526909|gb|EEF29115.1| Chromosome-associated kinesin KLP1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1736 bits (4497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 838/1033 (81%), Positives = 934/1033 (90%), Gaps = 7/1033 (0%)

Query: 4    ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSA 63
            ASENCSVKVAVH+RPLIGDER QGCKEC  VT G PQVQIGTHSFTFD VYGNGGSPSS+
Sbjct: 3    ASENCSVKVAVHIRPLIGDERIQGCKECTTVTPGKPQVQIGTHSFTFDSVYGNGGSPSSS 62

Query: 64   MFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIE 123
            MF ECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGT LR+G QTGLIPQVM ALFNKIE
Sbjct: 63   MFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTSLRDGCQTGLIPQVMKALFNKIE 122

Query: 124  TLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNG 183
             L++Q EFQLHVSFIEILKEEVRDLLDSVS+SKS+ ANGH+GKVS+ GRPPIQIRESSNG
Sbjct: 123  KLKYQTEFQLHVSFIEILKEEVRDLLDSVSLSKSMPANGHSGKVSVPGRPPIQIRESSNG 182

Query: 184  VITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243
            VITL+GSTEVAVNTL+EMA CLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHS+
Sbjct: 183  VITLSGSTEVAVNTLKEMAGCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSI 242

Query: 244  SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 303
            SP N TPDEDM EEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA
Sbjct: 243  SPVNDTPDEDMGEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 302

Query: 304  LGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRA 363
            LGDEKKR+EGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEE+LNTLKYANRA
Sbjct: 303  LGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRA 362

Query: 364  RNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNED 423
            RNIQNKPVVNRDLIS+++Q++RQQLKYLQAELCAR GG+P DEVQ LK RIAWLEATNED
Sbjct: 363  RNIQNKPVVNRDLISNEVQQMRQQLKYLQAELCARGGGSPPDEVQALKERIAWLEATNED 422

Query: 424  LCQELHEYRSRRAVVEHCGTDAQEGPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDGNSSE 483
            L +ELHE+RSR AVV+ C  D+QEG  SF K DGLKRGFQS+DSSDYQ+DE VS  +S E
Sbjct: 423  LSRELHEHRSRCAVVDQCEIDSQEGHASFTKCDGLKRGFQSMDSSDYQLDEDVSGESSGE 482

Query: 484  IEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIMELEEE 543
            I+E AKEWEHAL ++TMDKEL ELN+RLEQKESEMKLFG +DTE+L+ HF KKIMELEEE
Sbjct: 483  IDEAAKEWEHALIRSTMDKELIELNRRLEQKESEMKLFGGVDTESLKQHFRKKIMELEEE 542

Query: 544  KRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQ 603
            KRIVQQERDRLLAEIEN AANSDG TQK Q+ H+ KLKALEAQIL+LK+KQESQVELLKQ
Sbjct: 543  KRIVQQERDRLLAEIENRAANSDGQTQKAQESHSQKLKALEAQILDLKRKQESQVELLKQ 602

Query: 604  KHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASREKELLKLKKEGRKNEFE 663
            K +S+EAAKRLQAEIQ IKAQKVQLQ++IKQE+EQFRQW+ASREKE+L+L+KEGR+NE+E
Sbjct: 603  KQRSEEAAKRLQAEIQHIKAQKVQLQHRIKQESEQFRQWRASREKEVLQLRKEGRRNEYE 662

Query: 664  RHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNSTGYTTPTGQSNEK 723
            RHKLEAL+QRQK++LQRKTEEAA+AT+RLKELLEARKSSA E S NS G+T+ + Q N+K
Sbjct: 663  RHKLEALHQRQKLILQRKTEEAAMATRRLKELLEARKSSACETSANSNGHTS-SSQVNDK 721

Query: 724  SLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGH 783
            SLQ+WL+HELEV   VHEVRF+YEKQ Q Q  +A+EL +LKQVD+       P  GKNGH
Sbjct: 722  SLQRWLDHELEVIMKVHEVRFQYEKQKQEQTVMAEELALLKQVDRF-----GPNEGKNGH 776

Query: 784  SRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGD 843
             RLS +S NARMER+ASLENML++SS AL  MASQLSEA +RER+L+GRG WN LR MG+
Sbjct: 777  PRLSVMSSNARMERVASLENMLSISSNALTAMASQLSEAGDRERSLIGRGHWNQLRSMGE 836

Query: 844  AKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQA 903
            AKNLLQYMF  A+E R QLW+KD E+K++K+QLN+LVALL++SEAQRKELVK+Q++REQA
Sbjct: 837  AKNLLQYMFTAASEARCQLWDKDMEMKDLKDQLNELVALLRESEAQRKELVKEQKLREQA 896

Query: 904  VTIALASSASQGSSWRSSKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAAFVDQ 963
            V IALA+S S G+S  SSKH+ADD+SGPLSP+SLPAPKQLKF+PGIVNGSVRES AF+DQ
Sbjct: 897  VAIALATS-SLGNSRNSSKHYADDLSGPLSPISLPAPKQLKFSPGIVNGSVRESVAFIDQ 955

Query: 964  TRKMVPVGHLSMKKLATVGQPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIM 1023
            TRKMVPVG +SMKKL TVGQ GKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIM
Sbjct: 956  TRKMVPVGQMSMKKLVTVGQTGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIM 1015

Query: 1024 KSRPRPQVLVDMM 1036
            +SRPR   L+DM+
Sbjct: 1016 RSRPRSLALIDMI 1028




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082375|emb|CBI21380.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359480793|ref|XP_002278379.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255538224|ref|XP_002510177.1| Kinesin heavy chain, putative [Ricinus communis] gi|223550878|gb|EEF52364.1| Kinesin heavy chain, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|302142281|emb|CBI19484.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359492582|ref|XP_002282968.2| PREDICTED: chromosome-associated kinesin KIF4A-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147790676|emb|CAN61020.1| hypothetical protein VITISV_001140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224096722|ref|XP_002310712.1| predicted protein [Populus trichocarpa] gi|222853615|gb|EEE91162.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449447023|ref|XP_004141269.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] gi|449523834|ref|XP_004168928.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224067254|ref|XP_002302432.1| predicted protein [Populus trichocarpa] gi|222844158|gb|EEE81705.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1036
TAIR|locus:21609121035 FRA1 "FRAGILE FIBER 1" [Arabid 0.980 0.981 0.707 0.0
TAIR|locus:20748551051 KICP-02 [Arabidopsis thaliana 0.965 0.951 0.675 0.0
TAIR|locus:2173537 1294 AT5G60930 [Arabidopsis thalian 0.700 0.561 0.440 3e-144
MGI|MGI:109234 1668 Kif21b "kinesin family member 0.364 0.226 0.496 4.5e-108
UNIPROTKB|I3LPA4 1474 KIF21B "Uncharacterized protei 0.358 0.251 0.496 3.2e-105
UNIPROTKB|F1NUN8 1621 KIF21B "Uncharacterized protei 0.358 0.228 0.491 3.3e-105
UNIPROTKB|F1NA34 1662 KIF21B "Uncharacterized protei 0.358 0.223 0.491 3.8e-105
UNIPROTKB|O95239 1232 KIF4A "Chromosome-associated k 0.581 0.488 0.330 2.1e-104
UNIPROTKB|K7GQ60 1210 KIF4A "Uncharacterized protein 0.583 0.499 0.325 3.6e-104
UNIPROTKB|F1RTL0 1234 KIF4A "Uncharacterized protein 0.583 0.489 0.325 4.2e-104
TAIR|locus:2160912 FRA1 "FRAGILE FIBER 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3704 (1308.9 bits), Expect = 0., P = 0.
 Identities = 732/1034 (70%), Positives = 855/1034 (82%)

Query:     6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMF 65
             ++CSVKVAVH+RPLIGDER QGC++CV V  G PQVQIG+HSFTFDHVYG+ GSPS+ M+
Sbjct:     8 DDCSVKVAVHIRPLIGDERIQGCQDCVTVVTGKPQVQIGSHSFTFDHVYGSSGSPSTEMY 67

Query:    66 GECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETL 125
              EC APLVDGLFQGYNATVLAYGQTGSGKTYTMGTG  +  QTG+IPQVMNALF KIETL
Sbjct:    68 EECAAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGCGDSSQTGIIPQVMNALFTKIETL 127

Query:   126 RHQMEFQLHVSFIEILKEEVRDLLDXXXXXXXXTAN-GHAGKVS-ISGRPPIQIRESSNG 183
             + Q+EFQ+HVSFIEI KEEV+DLLD        T N GH GKV+ + G+PPIQIRE+SNG
Sbjct:   128 KQQIEFQIHVSFIEIHKEEVQDLLDPCTVNKSDTNNTGHVGKVAHVPGKPPIQIRETSNG 187

Query:   184 VITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243
             VITLAGSTEV+V+TL+EMAACL+QGS+SRATGSTNMNNQSSRSHAIFTIT+EQMRK+++ 
Sbjct:   188 VITLAGSTEVSVSTLKEMAACLDQGSVSRATGSTNMNNQSSRSHAIFTITVEQMRKINTD 247

Query:   244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 303
             SP+NG  +  + EEY CAKLHLVDLAGSERAKRTGSDGLR KEG+HIN+GLLALGNVISA
Sbjct:   248 SPENGAYNGSLKEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISA 307

Query:   304 LGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRA 363
             LGDEKKR++G HVPYRDSKLTRLLQDSLGGNS+TVMIACISPADINAEE+LNTLKYANRA
Sbjct:   308 LGDEKKRKDGAHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRA 367

Query:   364 RNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGRIAWLEATNED 423
             RNI+NKPVVNRD +SS+M K+RQQ++YLQAEL  R GG+   EVQ LK RI WLE  NE+
Sbjct:   368 RNIRNKPVVNRDPVSSEMLKMRQQVEYLQAELSLRTGGSSCAEVQALKERIVWLETANEE 427

Query:   424 LCQELHEYRSRRAVVEHCGTDAQE----GPVSFVKSDGLKRGFQSIDSSDYQMDEAVSDG 479
             LC+ELHEYRSR   VEH   D ++      V  V+ DGLKR   SI+SS+Y M EA + G
Sbjct:   428 LCRELHEYRSRCPGVEHSEKDFKDIRADDIVGSVRPDGLKRSLHSIESSNYPMVEATT-G 486

Query:   480 NSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGDIDTEALRHHFGKKIME 539
             +S EI+E AKEWEH L QN+MDKEL ELN+RLE+KESEMKLF   D  AL+ HFGKKI E
Sbjct:   487 DSREIDEEAKEWEHKLLQNSMDKELYELNRRLEEKESEMKLFDGYDPAALKQHFGKKIAE 546

Query:   540 LEEEKRIVQQERDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVE 599
             +E+EKR VQ+ER+RLLAEIENLA  SDG  QK+QD H   LKALEAQIL+LKKKQESQV+
Sbjct:   547 VEDEKRSVQEERNRLLAEIENLA--SDGQAQKLQDVHAQNLKALEAQILDLKKKQESQVQ 604

Query:   600 LLKQKHKSDEAAKRLQAEIQSIKAQKVQLQNKIKQEAEQFRQWKASRXXXXXXXXXXGRK 659
             LLKQK KSD+AA+RLQ EIQSIKAQKVQLQ+++KQEAEQFRQWKASR          GRK
Sbjct:   605 LLKQKQKSDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQFRQWKASREKELLQLRKEGRK 664

Query:   660 NEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNSTGYTTPTGQ 719
             +E+ERHKL+ALNQRQKMVLQRKTEEAA+ATKRLKELLEARKSS RE+S  + G+ T  GQ
Sbjct:   665 SEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSPREHSAGTNGFGT-NGQ 723

Query:   720 SNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRG 779
             +NEKSLQ+WL+HELEV  NVHEVR +YEKQS V+AALA+EL +L+QVD+ ++ G SP RG
Sbjct:   724 TNEKSLQRWLDHELEVMVNVHEVRHEYEKQSHVRAALAEELAVLRQVDEFAVKGLSPPRG 783

Query:   780 KNGHSRLSSLSPNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLR 839
             KNG +R SSLSPNARM RI+SLENML +SS +LV MASQLSEAEERERA   RGRWN LR
Sbjct:   784 KNGFARASSLSPNARMARISSLENMLVISSNSLVAMASQLSEAEERERAFTNRGRWNQLR 843

Query:   840 FMGDAKNLLQYMFNVAAETRFQLWEKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRM 899
              MG+AKNLLQYMFN  AETR QLWEKD EIKE+K+Q  ++V LL+QSE +RKE  K+ ++
Sbjct:   844 SMGEAKNLLQYMFNSLAETRCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRKEAEKELKL 903

Query:   900 REQAVTIXXXXXXXXXXXXXXXKHFADDMSGPLSPVSLPAPKQLKFTPGIVNGSVRESAA 959
             REQA+                 KH A+D+S P SP+++PA KQLKFTPGI NG VR  AA
Sbjct:   904 REQAIA------TSLGTPPSSVKHVAEDLSTP-SPMTVPAQKQLKFTPGIANGKVRGPAA 956

Query:   960 FVDQTRKMVPVGHLSMKKLATVG-QPGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHS 1018
             F+D  +KMVP+G +SM+KL+ VG Q G+LWRWKRSHHQW++QFKWKWQKPW+LSEWI+ S
Sbjct:   957 FLDTNKKMVPMGQVSMRKLSAVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRLSEWIRTS 1016

Query:  1019 DETIMKSRPRPQVL 1032
             DET++KS+PR + L
Sbjct:  1017 DETLLKSKPRLKAL 1030




GO:0003777 "microtubule motor activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0007018 "microtubule-based movement" evidence=IEA
GO:0005737 "cytoplasm" evidence=IDA
GO:0010215 "cellulose microfibril organization" evidence=IMP
GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA
GO:0009086 "methionine biosynthetic process" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2074855 KICP-02 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173537 AT5G60930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:109234 Kif21b "kinesin family member 21B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LPA4 KIF21B "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NUN8 KIF21B "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NA34 KIF21B "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|O95239 KIF4A "Chromosome-associated kinesin KIF4A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|K7GQ60 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1RTL0 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00019544001
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (1031 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1036
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 0.0
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 1e-136
pfam00225326 pfam00225, Kinesin, Kinesin motor domain 1e-130
cd00106328 cd00106, KISc, Kinesin motor domain 1e-122
cd01365356 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K 1e-108
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 1e-108
cd01371333 cd01371, KISc_KIF3, Kinesin motor domain, kinesins 1e-102
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 1e-100
cd01369325 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine 4e-99
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 4e-99
cd01374321 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E 3e-95
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 6e-86
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 2e-79
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 4e-76
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 1e-73
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 2e-67
cd01376319 cd01376, KISc_KID_like, Kinesin motor domain, KIF2 2e-65
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 6e-64
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 1e-37
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 1e-10
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 5e-10
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 1e-08
COG0419908 COG0419, SbcC, ATPase involved in DNA repair [DNA 2e-08
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 2e-08
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 3e-08
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 4e-08
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 2e-07
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 2e-07
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 6e-07
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 6e-07
TIGR021691164 TIGR02169, SMC_prok_A, chromosome segregation prot 2e-06
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 3e-06
pfam02463 1162 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 5e-06
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 8e-06
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 9e-06
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 3e-05
PRK05771646 PRK05771, PRK05771, V-type ATP synthase subunit I; 3e-05
PRK03918 880 PRK03918, PRK03918, chromosome segregation protein 3e-05
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 6e-05
pfam13868349 pfam13868, Trichoplein, Tumour suppressor, Mitosta 6e-05
COG4942420 COG4942, COG4942, Membrane-bound metallopeptidase 8e-05
PRK03918880 PRK03918, PRK03918, chromosome segregation protein 2e-04
PRK03918 880 PRK03918, PRK03918, chromosome segregation protein 3e-04
PRK12704520 PRK12704, PRK12704, phosphodiesterase; Provisional 3e-04
COG0419908 COG0419, SbcC, ATPase involved in DNA repair [DNA 4e-04
pfam02463 1162 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 7e-04
PRK11448 1123 PRK11448, hsdR, type I restriction enzyme EcoKI su 8e-04
PRK03918880 PRK03918, PRK03918, chromosome segregation protein 0.001
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 0.001
COG1340294 COG1340, COG1340, Uncharacterized archaeal coiled- 0.001
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.002
TIGR03545555 TIGR03545, TIGR03545, TIGR03545 family protein 0.002
COG3064387 COG3064, TolA, Membrane protein involved in colici 0.002
COG4487438 COG4487, COG4487, Uncharacterized protein conserve 0.003
PRK00409782 PRK00409, PRK00409, recombination and DNA strand e 0.003
pfam02463 1162 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.004
COG5022 1463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 0.004
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
 Score =  564 bits (1456), Expect = 0.0
 Identities = 218/364 (59%), Positives = 257/364 (70%), Gaps = 27/364 (7%)

Query: 8   CSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSSAMFG 66
            SV+VAV VRPL+  E  +GC+ CV+V  G PQV +GT  SFTFD+V+    S    ++ 
Sbjct: 1   SSVRVAVRVRPLLPKELLEGCQVCVSVVPGEPQVTVGTDKSFTFDYVFDPSTSQE-EVYN 59

Query: 67  ECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGF---QTGLIPQVMNALFNKIE 123
            CVAPLVDGLF+GYNATVLAYGQTGSGKTYTMGT         + G+IP+ +  +F KI+
Sbjct: 60  TCVAPLVDGLFEGYNATVLAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKID 119

Query: 124 TLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNG 183
             + + +FQL VSF+E+  EEVRDLL                  S S + PIQIRE S G
Sbjct: 120 EKKDEPDFQLKVSFLELYNEEVRDLLSP----------------STSEKSPIQIREDSKG 163

Query: 184 VITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243
            I + G TEV VN+ QE+ +CLEQGSLSR T ST MN+QSSRSHAIFTITLEQ RK   +
Sbjct: 164 NIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGPI 223

Query: 244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISA 303
           +P +G    D       +K H VDLAGSER K+TG+ G RLKEGI IN GLLALGNVISA
Sbjct: 224 APMSG----DDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISA 279

Query: 304 LGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRA 363
           LGDE K+  G HVPYRDSKLTRLLQDSLGGNS T+MIAC+SPAD N EE+LNTLKYANRA
Sbjct: 280 LGDESKK--GSHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNFEETLNTLKYANRA 337

Query: 364 RNIQ 367
           RNI+
Sbjct: 338 RNIK 341


Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341

>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin Back     alignment and domain information
>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain Back     alignment and domain information
>gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|234252 TIGR03545, TIGR03545, TIGR03545 family protein Back     alignment and domain information
>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|226889 COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed Back     alignment and domain information
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain Back     alignment and domain information
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1036
KOG0244913 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG02431041 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG4280574 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0240607 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] 100.0
PLN03188 1320 kinesin-12 family protein; Provisional 100.0
KOG0242675 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01373337 KISc_KLP2_like Kinesin motor domain, KLP2-like sub 100.0
cd01370338 KISc_KIP3_like Kinesin motor domain, KIP3-like sub 100.0
cd01368345 KISc_KIF23_like Kinesin motor domain, KIF23-like s 100.0
cd01365356 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p 100.0
cd01364352 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind 100.0
cd01372341 KISc_KIF4 Kinesin motor domain, KIF4-like subfamil 100.0
cd01371333 KISc_KIF3 Kinesin motor domain, kinesins II or KIF 100.0
cd01367322 KISc_KIF2_like Kinesin motor domain, KIF2-like gro 100.0
cd01369325 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy 100.0
cd01376319 KISc_KID_like Kinesin motor domain, KIF22/Kid-like 100.0
cd01375334 KISc_KIF9_like Kinesin motor domain, KIF9-like sub 100.0
cd01374321 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like 100.0
cd01366329 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ 100.0
smart00129335 KISc Kinesin motor, catalytic domain. ATPase. Micr 100.0
KOG0239670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 100.0
KOG0247809 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0246676 consensus Kinesin-like protein [Cytoskeleton] 100.0
PF00225335 Kinesin: Kinesin motor domain; InterPro: IPR001752 100.0
cd00106328 KISc Kinesin motor domain. This catalytic (head) d 100.0
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 100.0
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 100.0
PF01576 859 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu 99.79
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 99.57
PRK03918880 chromosome segregation protein; Provisional 99.0
PRK02224880 chromosome segregation protein; Provisional 98.95
PF01576 859 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu 98.86
COG1196 1163 Smc Chromosome segregation ATPases [Cell division 98.83
PRK02224 880 chromosome segregation protein; Provisional 98.79
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 98.78
TIGR006061311 rad50 rad50. This family is based on the phylogeno 98.76
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 98.75
TIGR02168 1179 SMC_prok_B chromosome segregation protein SMC, com 98.75
PRK03918880 chromosome segregation protein; Provisional 98.74
TIGR006061311 rad50 rad50. This family is based on the phylogeno 98.73
TIGR02168 1179 SMC_prok_B chromosome segregation protein SMC, com 98.69
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 98.68
KOG0612 1317 consensus Rho-associated, coiled-coil containing p 98.62
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 98.6
TIGR02169 1164 SMC_prok_A chromosome segregation protein SMC, pri 98.55
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 98.44
TIGR02169 1164 SMC_prok_A chromosome segregation protein SMC, pri 98.41
PF00038312 Filament: Intermediate filament protein; InterPro: 98.35
KOG0977546 consensus Nuclear envelope protein lamin, intermed 98.29
COG1196 1163 Smc Chromosome segregation ATPases [Cell division 98.26
KOG0971 1243 consensus Microtubule-associated protein dynactin 98.25
KOG4673961 consensus Transcription factor TMF, TATA element m 98.2
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 98.18
PF10174775 Cast: RIM-binding protein of the cytomatrix active 98.18
PF10174 775 Cast: RIM-binding protein of the cytomatrix active 98.16
KOG0964 1200 consensus Structural maintenance of chromosome pro 98.16
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 98.14
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 98.11
KOG0971 1243 consensus Microtubule-associated protein dynactin 98.08
PRK01156895 chromosome segregation protein; Provisional 98.04
KOG0996 1293 consensus Structural maintenance of chromosome pro 98.03
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 98.02
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 98.0
KOG0963629 consensus Transcription factor/CCAAT displacement 98.0
KOG0996 1293 consensus Structural maintenance of chromosome pro 97.99
KOG0612 1317 consensus Rho-associated, coiled-coil containing p 97.94
PRK01156895 chromosome segregation protein; Provisional 97.92
KOG0964 1200 consensus Structural maintenance of chromosome pro 97.89
KOG0977546 consensus Nuclear envelope protein lamin, intermed 97.89
PF00038312 Filament: Intermediate filament protein; InterPro: 97.87
KOG0995581 consensus Centromere-associated protein HEC1 [Cell 97.76
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 97.73
KOG4673961 consensus Transcription factor TMF, TATA element m 97.72
PF15070617 GOLGA2L5: Putative golgin subfamily A member 2-lik 97.68
KOG09331174 consensus Structural maintenance of chromosome pro 97.67
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 97.61
PRK04863 1486 mukB cell division protein MukB; Provisional 97.55
PF05701522 WEMBL: Weak chloroplast movement under blue light; 97.48
PF09755310 DUF2046: Uncharacterized conserved protein H4 (DUF 97.45
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 97.41
PRK04863 1486 mukB cell division protein MukB; Provisional 97.38
PRK11637428 AmiB activator; Provisional 97.34
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 97.33
PRK11637428 AmiB activator; Provisional 97.26
KOG0963629 consensus Transcription factor/CCAAT displacement 97.25
KOG09941758 consensus Extracellular matrix glycoprotein Lamini 97.23
PF05557722 MAD: Mitotic checkpoint protein; InterPro: IPR0086 97.16
PHA02562562 46 endonuclease subunit; Provisional 97.12
PRK11281 1113 hypothetical protein; Provisional 97.1
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 97.05
COG4942420 Membrane-bound metallopeptidase [Cell division and 97.02
PRK04778569 septation ring formation regulator EzrA; Provision 96.85
PRK04778569 septation ring formation regulator EzrA; Provision 96.77
PF05557 722 MAD: Mitotic checkpoint protein; InterPro: IPR0086 96.73
KOG4593 716 consensus Mitotic checkpoint protein MAD1 [Cell cy 96.68
PRK10929 1109 putative mechanosensitive channel protein; Provisi 96.68
KOG0933 1174 consensus Structural maintenance of chromosome pro 96.66
COG4942420 Membrane-bound metallopeptidase [Cell division and 96.65
PHA02562562 46 endonuclease subunit; Provisional 96.64
COG0419908 SbcC ATPase involved in DNA repair [DNA replicatio 96.59
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 96.58
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 96.54
KOG0978698 consensus E3 ubiquitin ligase involved in syntaxin 96.45
KOG0995581 consensus Centromere-associated protein HEC1 [Cell 96.42
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 96.4
KOG0018 1141 consensus Structural maintenance of chromosome pro 96.33
PF05701522 WEMBL: Weak chloroplast movement under blue light; 96.16
COG0556663 UvrB Helicase subunit of the DNA excision repair c 96.13
PF10481307 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 96.11
PF14915305 CCDC144C: CCDC144C protein coiled-coil region 96.1
KOG0946970 consensus ER-Golgi vesicle-tethering protein p115 95.95
PF09755310 DUF2046: Uncharacterized conserved protein H4 (DUF 95.84
PF15066527 CAGE1: Cancer-associated gene protein 1 family 95.83
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 95.77
COG0419908 SbcC ATPase involved in DNA repair [DNA replicatio 95.75
PF05667594 DUF812: Protein of unknown function (DUF812); Inte 95.67
KOG0962 1294 consensus DNA repair protein RAD50, ABC-type ATPas 95.61
KOG0999 772 consensus Microtubule-associated protein Bicaudal- 95.5
KOG0980 980 consensus Actin-binding protein SLA2/Huntingtin-in 95.41
KOG0980 980 consensus Actin-binding protein SLA2/Huntingtin-in 95.37
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 95.35
PF15619194 Lebercilin: Ciliary protein causing Leber congenit 95.16
COG5185622 HEC1 Protein involved in chromosome segregation, i 95.13
PF05483786 SCP-1: Synaptonemal complex protein 1 (SCP-1); Int 94.88
PF05622713 HOOK: HOOK protein; InterPro: IPR008636 This famil 94.84
COG4372499 Uncharacterized protein conserved in bacteria with 94.8
COG4372499 Uncharacterized protein conserved in bacteria with 94.77
PF05622713 HOOK: HOOK protein; InterPro: IPR008636 This famil 94.65
PF05911 769 DUF869: Plant protein of unknown function (DUF869) 94.65
PF05010207 TACC: Transforming acidic coiled-coil-containing p 94.43
PF15070617 GOLGA2L5: Putative golgin subfamily A member 2-lik 94.4
PRK09039343 hypothetical protein; Validated 94.2
PF05010207 TACC: Transforming acidic coiled-coil-containing p 94.08
PRK09039343 hypothetical protein; Validated 93.89
PF07926132 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: 93.64
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 93.6
PF15066527 CAGE1: Cancer-associated gene protein 1 family 93.6
COG2805353 PilT Tfp pilus assembly protein, pilus retraction 93.4
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 93.33
COG1340294 Uncharacterized archaeal coiled-coil protein [Func 93.27
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 93.13
PF09787511 Golgin_A5: Golgin subfamily A member 5; InterPro: 93.07
PF06160560 EzrA: Septation ring formation regulator, EzrA ; I 92.98
PF04849306 HAP1_N: HAP1 N-terminal conserved region; InterPro 92.94
KOG4809654 consensus Rab6 GTPase-interacting protein involved 92.93
KOG2129552 consensus Uncharacterized conserved protein H4 [Fu 92.91
PRK06893229 DNA replication initiation factor; Validated 92.9
PF14988206 DUF4515: Domain of unknown function (DUF4515) 92.87
PF14662193 CCDC155: Coiled-coil region of CCDC155 92.79
PF14662193 CCDC155: Coiled-coil region of CCDC155 92.11
PF05667594 DUF812: Protein of unknown function (DUF812); Inte 91.66
KOG2129552 consensus Uncharacterized conserved protein H4 [Fu 91.48
KOG0946970 consensus ER-Golgi vesicle-tethering protein p115 91.23
KOG0999 772 consensus Microtubule-associated protein Bicaudal- 91.23
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 91.08
PRK06620214 hypothetical protein; Validated 91.04
PF06160560 EzrA: Septation ring formation regulator, EzrA ; I 90.92
COG3883265 Uncharacterized protein conserved in bacteria [Fun 90.79
TIGR03007498 pepcterm_ChnLen polysaccharide chain length determ 90.74
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 90.67
COG3883265 Uncharacterized protein conserved in bacteria [Fun 90.5
PF04849306 HAP1_N: HAP1 N-terminal conserved region; InterPro 90.32
PF13514 1111 AAA_27: AAA domain 90.12
KOG09941758 consensus Extracellular matrix glycoprotein Lamini 89.81
PRK09087226 hypothetical protein; Validated 89.7
COG1340294 Uncharacterized archaeal coiled-coil protein [Func 89.64
PF09730 717 BicD: Microtubule-associated protein Bicaudal-D; I 89.63
PF15619194 Lebercilin: Ciliary protein causing Leber congenit 89.61
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 89.28
PF04111314 APG6: Autophagy protein Apg6; InterPro: IPR007243 89.25
PF10473140 CENP-F_leu_zip: Leucine-rich repeats of kinetochor 89.21
KOG1853333 consensus LIS1-interacting protein NUDE [Cytoskele 89.05
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 88.96
PRK14086617 dnaA chromosomal replication initiation protein; P 88.85
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 88.84
PF09728309 Taxilin: Myosin-like coiled-coil protein; InterPro 88.83
KOG1850391 consensus Myosin-like coiled-coil protein [Cytoske 88.82
KOG1003205 consensus Actin filament-coating protein tropomyos 88.78
TIGR01843423 type_I_hlyD type I secretion membrane fusion prote 88.48
PF12325120 TMF_TATA_bd: TATA element modulatory factor 1 TATA 88.46
KOG0018 1141 consensus Structural maintenance of chromosome pro 88.29
TIGR01005754 eps_transp_fam exopolysaccharide transport protein 88.16
PF10168717 Nup88: Nuclear pore component; InterPro: IPR019321 88.02
PF15294278 Leu_zip: Leucine zipper 87.27
PF14988206 DUF4515: Domain of unknown function (DUF4515) 87.19
PRK05642234 DNA replication initiation factor; Validated 87.12
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 87.01
PRK08727233 hypothetical protein; Validated 87.01
PRK14088440 dnaA chromosomal replication initiation protein; P 86.87
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 86.76
PF15254861 CCDC14: Coiled-coil domain-containing protein 14 86.59
PRK13729 475 conjugal transfer pilus assembly protein TraB; Pro 86.53
KOG1853333 consensus LIS1-interacting protein NUDE [Cytoskele 86.23
KOG0962 1294 consensus DNA repair protein RAD50, ABC-type ATPas 86.16
COG1474366 CDC6 Cdc6-related protein, AAA superfamily ATPase 86.13
PF08614194 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR 85.95
PF13851201 GAS: Growth-arrest specific micro-tubule binding 85.87
KOG4403575 consensus Cell surface glycoprotein STIM, contains 85.82
PF04851184 ResIII: Type III restriction enzyme, res subunit; 85.62
PF10146230 zf-C4H2: Zinc finger-containing protein ; InterPro 85.4
PF07926132 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: 85.33
PF09731582 Mitofilin: Mitochondrial inner membrane protein; I 85.26
PF11559151 ADIP: Afadin- and alpha -actinin-Binding; InterPro 85.22
COG0593408 DnaA ATPase involved in DNA replication initiation 85.14
PRK08084235 DNA replication initiation factor; Provisional 85.09
PF10168717 Nup88: Nuclear pore component; InterPro: IPR019321 84.91
PRK12377248 putative replication protein; Provisional 84.83
PF05483786 SCP-1: Synaptonemal complex protein 1 (SCP-1); Int 84.8
PRK00149450 dnaA chromosomal replication initiation protein; R 84.75
PF10481307 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 84.52
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 84.36
PF00769246 ERM: Ezrin/radixin/moesin family; InterPro: IPR011 83.99
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 83.94
smart00787312 Spc7 Spc7 kinetochore protein. This domain is foun 83.85
TIGR00631655 uvrb excinuclease ABC, B subunit. This family is b 83.64
PF13851201 GAS: Growth-arrest specific micro-tubule binding 83.55
PF09730717 BicD: Microtubule-associated protein Bicaudal-D; I 83.34
PRK08116268 hypothetical protein; Validated 83.33
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 83.2
PRK06526254 transposase; Provisional 83.16
KOG1899 861 consensus LAR transmembrane tyrosine phosphatase-i 83.11
PRK14087450 dnaA chromosomal replication initiation protein; P 83.1
PF1324576 AAA_19: Part of AAA domain 82.89
PF04912388 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit 82.68
TIGR01420343 pilT_fam pilus retraction protein PilT. This model 82.65
PF04582326 Reo_sigmaC: Reovirus sigma C capsid protein; Inter 82.48
KOG09791072 consensus Structural maintenance of chromosome pro 82.43
COG5008375 PilU Tfp pilus assembly protein, ATPase PilU [Cell 82.41
PF04156191 IncA: IncA protein; InterPro: IPR007285 Chlamydia 82.32
PRK08903227 DnaA regulatory inactivator Hda; Validated 82.01
TIGR00362405 DnaA chromosomal replication initiator protein Dna 81.99
PRK07952244 DNA replication protein DnaC; Validated 81.46
TIGR01005754 eps_transp_fam exopolysaccharide transport protein 81.42
KOG4302 660 consensus Microtubule-associated protein essential 81.35
TIGR01000457 bacteriocin_acc bacteriocin secretion accessory pr 81.35
PRK00411394 cdc6 cell division control protein 6; Reviewed 81.18
PF04111314 APG6: Autophagy protein Apg6; InterPro: IPR007243 81.14
PF10212518 TTKRSYEDQ: Predicted coiled-coil domain-containing 81.09
PRK10436462 hypothetical protein; Provisional 80.92
KOG4593716 consensus Mitotic checkpoint protein MAD1 [Cell cy 80.81
TIGR02928365 orc1/cdc6 family replication initiation protein. M 80.45
TIGR02533486 type_II_gspE general secretory pathway protein E. 80.36
TIGR02538564 type_IV_pilB type IV-A pilus assembly ATPase PilB. 80.24
PLN02939 977 transferase, transferring glycosyl groups 80.08
>KOG0244 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
Probab=100.00  E-value=3.6e-119  Score=1059.08  Aligned_cols=823  Identities=42%  Similarity=0.571  Sum_probs=719.4

Q ss_pred             eCCCCcchhccCCceEEEEeCCCceeeecc-eeEEcceeeCCCCCCccccccccchhhHHHhhcCCCccEeeeccCCCCc
Q 001657           16 VRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGK   94 (1036)
Q Consensus        16 vRP~~~~e~~~~~~~~v~v~~~~~~v~~~~-~~F~FD~Vf~~~~t~q~~vy~~~v~plV~~~l~G~N~ti~aYGqTgSGK   94 (1036)
                      |||+...|...||..|+.+.++.|+|.+++ .+|+||+||++. +.|..+|+.||.|+++.+|+|||+||+|||||||||
T Consensus         1 vRpl~~~e~~~g~~~c~~~~~~~pqv~ig~~~s~t~d~v~~~~-~~Q~~~~e~~V~~l~~~lf~gynatvlaygQtgsgk   79 (913)
T KOG0244|consen    1 VRPLKQMEEEQGCRRCTEVSPRTPQVAIGKDASFTYDKVFLDL-ESQKEVYESCVRPLREKLFAGYNATVLAYGQTGSGK   79 (913)
T ss_pred             CCCccchHHHhcchhhcccCCCCCceeecCCcceeeeeeccCc-hHHHHHHHHHHHHHHHHHhhhhcceeeeecccCCCc
Confidence            799999999999999999999999999875 799999999876 459999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCcc-ccHHHHHHHHHHHHHhhcccceEEEEeehhhhhhhhhhhccCCcccccccccCCCCCccccCCCC
Q 001657           95 TYTMGTGLREGFQT-GLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRP  173 (1036)
Q Consensus        95 TyTm~G~~~~~~~~-Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~  173 (1036)
                      ||||++++...... |+|||++.++|..|..... ..|.|.|||+|||++.|+|||.|...                 ..
T Consensus        80 Tytmgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~-~~f~i~vs~vely~e~v~dl~~~~~~-----------------~~  141 (913)
T KOG0244|consen   80 TYTMGTNDAPAQDTVGVIPRAVSTLFTRIGKTES-FVFRITVSFVELYNEEVLDLLKPSRL-----------------KA  141 (913)
T ss_pred             eeecccccccccccCCcCcchHHHHHHHHHhhhc-cceeeeeeeeeccchhhhhhcChhhh-----------------hh
Confidence            99999987655444 9999999999999998654 78999999999999999999985431                 23


Q ss_pred             CceEEecCCCcEEEcCceEEEcCCHHHHHHHHHhcccCcccccCCCCCCCCCceeEEEEEEEeeeecccCCCCCCCCCCC
Q 001657          174 PIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDED  253 (1036)
Q Consensus       174 ~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~N~~SSRSH~Ifti~v~q~~~~~~~~~~~~~~~~~  253 (1036)
                      ++.+++ +.|++++.|+++++|.+..+++.+|..|...|++++|+||.+|||||+||||+++++.+...           
T Consensus       142 ~i~~~e-~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~~-----------  209 (913)
T KOG0244|consen  142 NIKLRE-PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLSK-----------  209 (913)
T ss_pred             ceeccc-cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhhc-----------
Confidence            478888 88999999999999999999999999999999999999999999999999999998655322           


Q ss_pred             CCcceEEeeeeeeecCCCccccccCCCcchhhhhhhhhhhhHHHHHHHHHhhhhccCCCCCcccCCCChhhhhhhccCCC
Q 001657          254 MDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGG  333 (1036)
Q Consensus       254 ~~~~~~~skL~~VDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrlLqdsLgG  333 (1036)
                        ...++++|||||||||||.++|+++|.|++||++||.||++|||||++|++.++   ++|||||||+|||||||+|||
T Consensus       210 --~s~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk---~~~vpyRdSkltrlLQdslgG  284 (913)
T KOG0244|consen  210 --RSSFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKK---GGEVPYRDSKLTRLLQDSLGG  284 (913)
T ss_pred             --cchhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhc---CCcccchHHHHHHHHHHHhcC
Confidence              226789999999999999999999999999999999999999999999999875   679999999999999999999


Q ss_pred             CceeEEEeecCCCCCCHHHHHHHHHHHHHhhcccCccccccccchHHHHHHHHHHHHHHHHHhhhhCCCChHHHHHHHHH
Q 001657          334 NSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCARAGGAPSDEVQVLKGR  413 (1036)
Q Consensus       334 ns~t~mI~~vSP~~~~~~eTl~TL~fa~rar~Ik~kpvvn~d~~~~ei~~Lr~ei~~Lq~eL~~~~~~~~~~e~~~L~ek  413 (1036)
                      |+.|+||+||||++.|+.||++||+||+||++|+|||+||.|+...+|..|+.+|+.|+.+|+...+....+++..+..+
T Consensus       285 ns~tlmiaCiSpadsn~~EtlnTl~ya~Rak~iknk~vvN~d~~~~~~~~lK~ql~~l~~ell~~~~~~~~~ei~sl~~e  364 (913)
T KOG0244|consen  285 NSDTLMIACISPADSNAQETLNTLRYADRAKQIKNKPVVNQDPKSFEMLKLKAQLEPLQVELLSKAGDELDAEINSLPFE  364 (913)
T ss_pred             CcceeeeeecChhhhhhhhHHHHHHHhhHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHhhccccchhHHhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999887665567899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHhccccccCCC------------------c--ccccchhhhhccccccccchhhh
Q 001657          414 IAWLEATNEDLCQELHEYRSRRAVVEHCGTDAQEGP------------------V--SFVKSDGLKRGFQSIDSSDYQMD  473 (1036)
Q Consensus       414 i~~L~~e~~~L~~eL~~~~~~la~~Ee~~~~~~~~~------------------~--~~~~~~~L~~~~~~l~~~~~~l~  473 (1036)
                      +..++..+..+..++++.+..+..-..+...+....                  .  ...+...|.+.++++....+++.
T Consensus       365 ~~~l~~~~d~~~~e~~e~~s~~s~~~~~~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~v~~~~~e~~  444 (913)
T KOG0244|consen  365 NVTLEETLDALLQEKGEERSTLSSKSLKLTGAEKEKDKLRRRTDSCMNLLSEDSNEDASDKSASLPKPLEPVDSGTEEIG  444 (913)
T ss_pred             hhhhhhhHHHHhcchhhhhhhhhHHHHhcchhhhhHHHHHHHHHHHHHHHHHhHhHHhhhccccCCcccccccccccccc
Confidence            999999999999999888877743322221111000                  0  00011124444444433212221


Q ss_pred             hhhhc-CCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001657          474 EAVSD-GNSSEIEEVAKEWEHALWQNTMDKELNELNKRLEQKESEMKLFGD--IDTEALRHHFGKKIMELEEEKRIVQQE  550 (1036)
Q Consensus       474 e~l~~-~~~~~~eee~~~~e~~~~q~kl~~El~eL~k~Le~kE~~~~~~~~--~~~~~~k~~~e~ki~~Le~ei~~lqkE  550 (1036)
                      ..... +++.........+++...+.+|..++.+++++|++||..++++..  ......+++|+.++..|+.++..++.|
T Consensus       445 ~~~~~~~~e~~~~~~~~~~~~~~~q~~ls~el~el~k~l~~Ke~l~rr~~~~~~~~~~~~~~~e~~~~~le~e~~~le~E  524 (913)
T KOG0244|consen  445 MNTDTSGDEAAEKELSETIGHPQKQGSLSGELSELEKRLAEKEPLTRRKAYEKAEKSKAKEQYESDSGTLEAEKSPLESE  524 (913)
T ss_pred             ccccCCCchhhhcccccCccchHHHhhhhHHHHHHHhhhccccHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHhcccccc
Confidence            11111 111111122456788889999999999999999999999988874  345678999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001657          551 RDRLLAEIENLAANSDGHTQKMQDGHTLKLKALEAQILELKKKQESQVELLKQKHKSDEAAKRLQAEIQSIKAQKVQLQN  630 (1036)
Q Consensus       551 rd~Ll~~l~~~~~~~~~~~~Kl~~~~~~~l~~LE~el~~L~~e~~~~~~L~K~K~K~E~~~~~L~~ei~~lk~~kv~L~r  630 (1036)
                      ++.|..++...    +....++.++|+++++.||.++..|+++...+..|.+.+.+.+.....|..+|..+|.++|+|++
T Consensus       525 ~~~l~~el~~~----~~~~~kl~eer~qklk~le~q~s~lkk~l~~~~~l~~~~~~~~~~~~kl~~ei~~~k~~kv~l~~  600 (913)
T KOG0244|consen  525 RSRLRNELNVF----NRLAAKLGEERVQKLKSLETQISLLKKKLSSQRKLIKPKPKSEGIRAKLLQEIHIAKGQKVQLLR  600 (913)
T ss_pred             cHHHHHHHHhh----hHHHHHhhhHHHHHHHHHHHHHHHHHHhhHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988    33788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc
Q 001657          631 KIKQEAEQFRQWKASREKELLKLKKEGRKNEFERHKLEALNQRQKMVLQRKTEEAAIATKRLKELLEARKSSARENSVNS  710 (1036)
Q Consensus       631 kmk~e~~~~~~~~~~~ekei~qLk~~~rK~e~Ei~~L~~~~~~q~~vLqRK~eE~~a~~krLke~Le~ek~~r~k~e~~~  710 (1036)
                      +|++|+++|+.|++..+|+..||+.+.|+.++++..++..+.+|..||+|+++|+.++++||++++..++......-   
T Consensus       601 ~~~~d~ekfr~~K~~~~Ke~~qlk~~~rk~~~~~~~~~~l~~~q~~vl~~kt~eas~~~krlk~a~~~r~~~~s~~~---  677 (913)
T KOG0244|consen  601 VMKEDAEKFRQWKDRTEKEWNQLKGQERKSEGEHPKLEVLVKKQNYVLQRKTEEASAANKRLKEALCIRALTSSGQV---  677 (913)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHhccchhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc---
Confidence            99999999999999999999999999999999999999999999999999999999999999999998876522110   


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcCCccccccCC
Q 001657          711 TGYTTPTGQSNEKSLQKWLEHELEVSANVHEVRFKYEKQSQVQAALADELTILKQVDQLSLNGHSPQRGKNGHSRLSSLS  790 (1036)
Q Consensus       711 ~~~~~~~~~~~~~~~~~Wl~~ELE~l~~l~E~~~~~~~q~e~r~k~~~El~~Lk~~~e~~~~~~~~~~~~~~~~~~~~~~  790 (1036)
                         ..............|+.+|+|++..+.++++++.++++.|+.+.-++..|+...                       
T Consensus       678 ---~~~~~~~~~~~~~~~~~~e~ei~~~~~~~~~~l~~~~~~ra~~~~d~~~~r~~~-----------------------  731 (913)
T KOG0244|consen  678 ---TLGDNGASTSRTVAWPSNEIEINQIALNPRGTLLYAAEERAVRMWDLKRLRSEG-----------------------  731 (913)
T ss_pred             ---chhhcCchhHHHHHHhccchHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence               000111345678999999999999999999999999999999999999998721                       


Q ss_pred             hhHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccccchhhccHHHHHHHHHHHHHHHHhHHHHHh-------
Q 001657          791 PNARMERIASLENMLNMSSKALVEMASQLSEAEERERALVGRGRWNHLRFMGDAKNLLQYMFNVAAETRFQLW-------  863 (1036)
Q Consensus       791 ~~~r~~qi~~Lq~~~~~~~~~~~~l~~ql~~~e~r~~~~~~k~r~~~i~s~~eak~~l~~l~~~~~~~~~ql~-------  863 (1036)
                          ...|.+|+.++...+++|++|++++..++++.+.+.   +|+++.++.+||+.+.++++..+..+++..       
T Consensus       732 ----~k~l~~L~~~~~~~~~~i~s~~~~i~~a~~d~~~~~---~w~~v~t~~~ak~~~~~~~~~~~~~r~~~~~~~~~~r  804 (913)
T KOG0244|consen  732 ----KKLLGSLEPVMELTSDQISSMQDLIITASKDERIKM---RWEAVGTLSEAKNFEPYLYDGIVALRIQGDNLFSGSR  804 (913)
T ss_pred             ----HHHHhhhHHHHHHHHHHHHhHHhhhcccccchhHHH---HHhcccccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Confidence                567899999999999999999999999987777666   999999999999999999999999998887       


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 001657          864 EKDTEIKEIKEQLNDLVALLKQSEAQRKELVKQQRMREQAVTIALASSASQ  914 (1036)
Q Consensus       864 E~~~k~~E~~~~~~el~~~~~~~~~e~~el~~~l~e~E~~~~~l~~~~~~~  914 (1036)
                      +...++.++..++.+....+++.+++..++..+.....+.+..++....+.
T Consensus       805 e~~~~~~~l~~kl~~~q~~~rk~e~~~~~~v~e~~~~~~~~~~~~~~~~~~  855 (913)
T KOG0244|consen  805 EKGIKKWDLTQKLLDEQVNLRKDEVQALGVVPEHPVLLSGCKGGILKVWQM  855 (913)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            788889999999999988999999999999999999999998888887664



>KOG0243 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG4280 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] Back     alignment and domain information
>PLN03188 kinesin-12 family protein; Provisional Back     alignment and domain information
>KOG0242 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group Back     alignment and domain information
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>smart00129 KISc Kinesin motor, catalytic domain Back     alignment and domain information
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information
>KOG0247 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0246 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport Back     alignment and domain information
>cd00106 KISc Kinesin motor domain Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] Back     alignment and domain information
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] Back     alignment and domain information
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function Back     alignment and domain information
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>PRK11281 hypothetical protein; Provisional Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins Back     alignment and domain information
>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK10929 putative mechanosensitive channel protein; Provisional Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function Back     alignment and domain information
>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] Back     alignment and domain information
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] Back     alignment and domain information
>PF14915 CCDC144C: CCDC144C protein coiled-coil region Back     alignment and domain information
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain Back     alignment and domain information
>PF15066 CAGE1: Cancer-associated gene protein 1 family Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair] Back     alignment and domain information
>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] Back     alignment and domain information
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease Back     alignment and domain information
>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] Back     alignment and domain information
>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex Back     alignment and domain information
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms Back     alignment and domain information
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] Back     alignment and domain information
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] Back     alignment and domain information
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms Back     alignment and domain information
>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants Back     alignment and domain information
>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PF15066 CAGE1: Cancer-associated gene protein 1 family Back     alignment and domain information
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues Back     alignment and domain information
>KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>PF14988 DUF4515: Domain of unknown function (DUF4515) Back     alignment and domain information
>PF14662 CCDC155: Coiled-coil region of CCDC155 Back     alignment and domain information
>PF14662 CCDC155: Coiled-coil region of CCDC155 Back     alignment and domain information
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] Back     alignment and domain information
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues Back     alignment and domain information
>PF13514 AAA_27: AAA domain Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] Back     alignment and domain information
>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] Back     alignment and domain information
>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] Back     alignment and domain information
>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed Back     alignment and domain information
>KOG1850 consensus Myosin-like coiled-coil protein [Cytoskeleton] Back     alignment and domain information
>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] Back     alignment and domain information
>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family Back     alignment and domain information
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] Back     alignment and domain information
>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family Back     alignment and domain information
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs Back     alignment and domain information
>PF15294 Leu_zip: Leucine zipper Back     alignment and domain information
>PF14988 DUF4515: Domain of unknown function (DUF4515) Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>PF15254 CCDC14: Coiled-coil domain-containing protein 14 Back     alignment and domain information
>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional Back     alignment and domain information
>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] Back     alignment and domain information
>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair] Back     alignment and domain information
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] Back     alignment and domain information
>PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 Back     alignment and domain information
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) Back     alignment and domain information
>PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology Back     alignment and domain information
>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>smart00787 Spc7 Spc7 kinetochore protein Back     alignment and domain information
>TIGR00631 uvrb excinuclease ABC, B subunit Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PRK06526 transposase; Provisional Back     alignment and domain information
>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) [] Back     alignment and domain information
>TIGR01420 pilT_fam pilus retraction protein PilT Back     alignment and domain information
>PF04582 Reo_sigmaC: Reovirus sigma C capsid protein; InterPro: IPR007662 Protein sigmaC in its native state was shown to be a homotrimer Back     alignment and domain information
>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family Back     alignment and domain information
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif Back     alignment and domain information
>PRK10436 hypothetical protein; Provisional Back     alignment and domain information
>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>TIGR02533 type_II_gspE general secretory pathway protein E Back     alignment and domain information
>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1036
4a14_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 6e-77
2xt3_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 7e-74
3b6u_A372 Crystal Structure Of The Motor Domain Of Human Kine 3e-69
2y5w_A365 Crystal Structure Of Drosophila Melanogaster Kinesi 2e-63
1mkj_A349 Human Kinesin Motor Domain With Docked Neck Linker 4e-62
4atx_C340 Rigor Kinesin Motor Domain With An Ordered Neck-Lin 8e-62
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 4e-61
2wbe_C373 Kinesin-5-Tubulin Complex With Amppnp Length = 373 1e-60
1bg2_A325 Human Ubiquitous Kinesin Motor Domain Length = 325 7e-60
1goj_A355 Structure Of A Fast Kinesin: Implications For Atpas 8e-60
2vvg_A350 Crystal Structure Of The G.Intestinalis Kinesin 2 G 7e-59
1ia0_K394 Kif1a Head-Microtubule Complex Structure In Atp-For 7e-59
1i5s_A367 Crystal Structure Of The Kif1a Motor Domain Complex 2e-58
1i6i_A366 Crystal Structure Of The Kif1a Motor Domain Complex 3e-58
1vfv_A366 Crystal Structure Of The Kif1a Motor Domain Complex 5e-58
1t5c_A349 Crystal Structure Of The Motor Domain Of Human Kine 6e-58
3gbj_A354 Crystal Structure Of The Motor Domain Of Kinesin Ki 2e-57
4aqv_C373 Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma 5e-57
3hqd_A369 Human Kinesin Eg5 Motor Domain In Complex With Ampp 2e-56
3lre_A355 Crystal Structure Analysis Of Human Kinesin-8 Motor 2e-56
1x88_A359 Human Eg5 Motor Domain Bound To Mg-Adp And Monastro 4e-56
1ii6_A368 Crystal Structure Of The Mitotic Kinesin Eg5 In Com 4e-56
4a28_A368 Eg5-2 Length = 368 5e-56
1q0b_A367 Crystal Structure Of The Motor Protein Ksp In Compl 5e-56
4a1z_A368 Eg5-1 Length = 368 5e-56
4ap0_A370 The Mitotic Kinesin Eg5 In Complex With Mg-Adp And 6e-56
2owm_A443 Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 6e-55
3zcw_A348 Eg5 - New Allosteric Binding Site Length = 348 9e-55
3h4s_A386 Structure Of The Complex Of A Mitotic Kinesin With 1e-49
1sdm_A369 Crystal Structure Of Kinesin-Like Calmodulin Bindin 9e-49
3bfn_A388 Crystal Structure Of The Motor Domain Of Human Kine 6e-46
2h58_A330 Crystal Structure Of The Kifc3 Motor Domain In Comp 2e-45
4h1g_A715 Structure Of Candida Albicans Kar3 Motor Domain Fus 3e-40
2gry_A420 Crystal Structure Of The Human Kif2 Motor Domain In 7e-40
1v8j_A410 The Crystal Structure Of The Minimal Functional Dom 1e-39
3nwn_A359 Crystal Structure Of The Human Kif9 Motor Domain In 2e-39
4etp_A403 C-Terminal Motor And Motor Homology Domain Of Kar3v 8e-39
4gkr_A371 Structure Of The C-Terminal Motor Domain Of Kar3 Fr 2e-38
3edl_D331 Kinesin13-Microtubule Ring Complex Length = 331 2e-38
2ncd_A420 Ncd (Non-Claret Disjunctional) Dimer From D. Melano 5e-38
3u06_A412 Crystal Structure Of The Kinesin-14 Ncdg347d Length 6e-38
2heh_A387 Crystal Structure Of The Kif2c Motor Domain (Casp T 6e-38
1cz7_A406 The Crystal Structure Of A Minus-End Directed Micro 6e-38
1f9t_A358 Crystal Structures Of Kinesin Mutants Reveal A Sign 2e-37
3l1c_A383 Kinesin-14 Protein Ncd, T436s Mutant Length = 383 2e-37
3kar_A346 The Motor Domain Of Kinesin-Like Protein Kar3, A Sa 2e-37
2rep_A376 Crystal Structure Of The Motor Domain Of Human Kine 3e-37
1n6m_A409 Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY 4e-37
1f9w_A347 Crystal Structures Of Mutants Reveal A Signalling P 9e-37
1f9u_A347 Crystal Structures Of Mutants Reveal A Signalling P 1e-36
1f9v_A347 Crystal Structures Of Mutants Reveal A Signalling P 1e-36
3t0q_A349 Motor Domain Structure Of The Kar3-Like Kinesin Fro 5e-36
3pxn_A344 Crystal Structure Of The Drosophila Kinesin Family 6e-36
3dc4_A344 Crystal Structure Of The Drosophila Kinesin Family 9e-36
1ry6_A360 Crystal Structure Of Internal Kinesin Motor Domain 4e-31
2kin_A238 Kinesin (Monomeric) From Rattus Norvegicus Length = 3e-29
3kin_B117 Kinesin (Dimeric) From Rattus Norvegicus Length = 1 1e-18
2kin_B100 Kinesin (Monomeric) From Rattus Norvegicus Length = 2e-17
>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure

Iteration: 1

Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 168/366 (45%), Positives = 225/366 (61%), Gaps = 33/366 (9%) Query: 4 ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIG-THSFTFDHVYGNGGSPSS 62 +E V+VA+ VRPL+ E G + C+ V G +V +G F F HV + Sbjct: 7 GAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGF-HVVLAEDAGQE 65 Query: 63 AMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMG----TGLREGFQTGLIPQVMNAL 118 A++ CV PL++ F+G+NATV AYGQTGSGKTYTMG L E Q G++P+ M Sbjct: 66 AVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLLEDEQ-GIVPRAMAEA 124 Query: 119 FNKIETLRHQMEFQLHVSFIEILKEEVRDLLDXXXXXXXXTANGHAGKVSISGRPPIQIR 178 F I+ ++ +HVS++E+ KEE RDLL+ V + R IQ+R Sbjct: 125 FKLIDE-NDLLDCLVHVSYLEVYKEEFRDLLE----------------VGTASRD-IQLR 166 Query: 179 ESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMR 238 E G + L G EV V L E+ + LE G+ +R TG+T++N+ SSRSH +FT+TLEQ Sbjct: 167 EDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRG 226 Query: 239 KLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALG 298 + S P + +K H VDLAGSER +TGS G RLKE I IN LLALG Sbjct: 227 RAPSRLP------RPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALG 280 Query: 299 NVISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLK 358 NVISALGD ++R G H+PYRDSK+TR+L+DSLGGN+KTVMIAC+SP+ + +E+LNTL Sbjct: 281 NVISALGDPQRR--GSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLN 338 Query: 359 YANRAR 364 YA+RA+ Sbjct: 339 YASRAQ 344
>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 Back     alignment and structure
>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 Back     alignment and structure
>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 Back     alignment and structure
>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 Back     alignment and structure
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 Back     alignment and structure
>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 Back     alignment and structure
>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 Back     alignment and structure
>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 Back     alignment and structure
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 Back     alignment and structure
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 Back     alignment and structure
>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 Back     alignment and structure
>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 Back     alignment and structure
>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 Back     alignment and structure
>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 Back     alignment and structure
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 Back     alignment and structure
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 Back     alignment and structure
>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 Back     alignment and structure
>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 Back     alignment and structure
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 Back     alignment and structure
>pdb|4A28|A Chain A, Eg5-2 Length = 368 Back     alignment and structure
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 Back     alignment and structure
>pdb|4A1Z|A Chain A, Eg5-1 Length = 368 Back     alignment and structure
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 Back     alignment and structure
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 Back     alignment and structure
>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 Back     alignment and structure
>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 Back     alignment and structure
>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 Back     alignment and structure
>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 Back     alignment and structure
>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 Back     alignment and structure
>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 Back     alignment and structure
>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 Back     alignment and structure
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 Back     alignment and structure
>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 Back     alignment and structure
>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 Back     alignment and structure
>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 Back     alignment and structure
>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 Back     alignment and structure
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 Back     alignment and structure
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 Back     alignment and structure
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 Back     alignment and structure
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 Back     alignment and structure
>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 Back     alignment and structure
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 Back     alignment and structure
>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 Back     alignment and structure
>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 Back     alignment and structure
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 Back     alignment and structure
>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 Back     alignment and structure
>pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 Back     alignment and structure
>pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 Back     alignment and structure
>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 Back     alignment and structure
>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 Back     alignment and structure
>pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 Back     alignment and structure
>pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1036
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 0.0
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 1e-176
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 1e-174
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 1e-172
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 1e-171
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 1e-168
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 1e-167
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 1e-165
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 1e-165
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 1e-165
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 1e-165
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 1e-161
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 1e-160
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 1e-157
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 1e-152
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 1e-152
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 1e-151
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 1e-149
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 1e-145
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 1e-144
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 1e-137
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 1e-137
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 1e-133
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 1e-132
3u06_A412 Protein claret segregational; motor domain, stalk 1e-122
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 1e-122
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 3e-53
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 9e-53
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 3e-11
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-09
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-09
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-10
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 3e-08
1f5n_A592 Interferon-induced guanylate-binding protein 1; GB 1e-06
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 3e-06
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 8e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 2e-05
2xs1_A704 Programmed cell death 6-interacting protein; prote 2e-04
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
 Score =  534 bits (1378), Expect = 0.0
 Identities = 161/365 (44%), Positives = 220/365 (60%), Gaps = 31/365 (8%)

Query: 4   ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGT-HSFTFDHVYGNGGSPSS 62
            +E   V+VA+ VRPL+  E   G + C+ V  G  +V +G    F F  V     +   
Sbjct: 7   GAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGFHVVLAED-AGQE 65

Query: 63  AMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGF---QTGLIPQVMNALF 119
           A++  CV PL++  F+G+NATV AYGQTGSGKTYTMG          + G++P+ M   F
Sbjct: 66  AVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAF 125

Query: 120 NKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRE 179
             I+     ++  +HVS++E+ KEE RDLL+  + S+                  IQ+RE
Sbjct: 126 KLIDE-NDLLDCLVHVSYLEVYKEEFRDLLEVGTASR-----------------DIQLRE 167

Query: 180 SSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRK 239
              G + L G  EV V  L E+ + LE G+ +R TG+T++N+ SSRSH +FT+TLEQ  +
Sbjct: 168 DERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGR 227

Query: 240 LHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGN 299
                            +   +K H VDLAGSER  +TGS G RLKE I IN  LLALGN
Sbjct: 228 ------APSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGN 281

Query: 300 VISALGDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKY 359
           VISALGD ++R  G H+PYRDSK+TR+L+DSLGGN+KTVMIAC+SP+  + +E+LNTL Y
Sbjct: 282 VISALGDPQRR--GSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNY 339

Query: 360 ANRAR 364
           A+RA+
Sbjct: 340 ASRAQ 344


>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1036
d1bg2a_323 c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId 9e-86
d1goja_354 c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 2e-82
d2zfia1349 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), 3e-82
d1x88a1345 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), 2e-81
d1ry6a_330 c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu 1e-77
d1f9va_342 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 8e-74
d1v8ka_362 c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c 2e-73
d1sdma_364 c.37.1.9 (A:) Kinesin heavy chain-like protein {Po 8e-70
d2ncda_368 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 3e-62
d2es4d1280 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) 1e-04
d1f5na1300 a.114.1.1 (A:284-583) Interferon-induced guanylate 0.002
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  277 bits (709), Expect = 9e-86
 Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 40/359 (11%)

Query: 8   CSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIGTHSFTFDHVYGNGGSPSSAMFGE 67
           C++KV    RPL   E  +G K       G   V I +  + FD V+    +    ++ +
Sbjct: 5   CNIKVMCRFRPLNESEVNRGDKYIAKF-QGEDTVVIASKPYAFDRVFQ-SSTSQEQVYND 62

Query: 68  CVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRH 127
           C   +V  + +GYN T+ AYGQT SGKT+TM   L +    G+IP+++  +FN I ++  
Sbjct: 63  CAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDE 122

Query: 128 QMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITL 187
            +EF + VS+ EI  +++RDLLD                     +  + + E  N V  +
Sbjct: 123 NLEFHIKVSYFEIYLDKIRDLLDVS-------------------KTNLSVHEDKNRVPYV 163

Query: 188 AGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPDN 247
            G TE  V +  E+   +++G  +R    TNMN  SSRSH+IF I ++Q           
Sbjct: 164 KGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQ----------- 212

Query: 248 GTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDE 307
              +    E+    KL+LVDLAGSE+  +TG++G  L E  +IN+ L ALGNVISAL + 
Sbjct: 213 ---ENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEG 269

Query: 308 KKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNI 366
                  +VPYRDSK+TR+LQDSLGGN +T ++ C SP+  N  E+ +TL +  RA+ I
Sbjct: 270 ST-----YVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 323


>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 Back     information, alignment and structure
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1036
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 100.0
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 100.0
d1v8ka_362 Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 100.0
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 100.0
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 100.0
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 100.0
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 100.0
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 100.0
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 93.09
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 89.06
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 83.04
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 82.08
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 82.02
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 80.19
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00  E-value=0  Score=647.92  Aligned_cols=346  Identities=35%  Similarity=0.571  Sum_probs=311.9

Q ss_pred             CEEEEEEECCCCCCHHCCCCCEEEEEECCCCEEEE----CCEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCE
Q ss_conf             63899982899960100499517998379860454----66258713355899887520001132226987533888527
Q 001657            9 SVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI----GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNATV   84 (1036)
Q Consensus         9 ~v~V~vRvRP~~~~e~~~~~~~~~~v~~~~~~v~~----~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G~N~tI   84 (1036)
                      .|+|+|||||+.+.|...+...++.+.........    ..+.|+||+||+++++ |.+||+. +.|+|+++++|||+||
T Consensus         1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~-q~~vy~~-v~~lv~~~l~G~n~~i   78 (364)
T d1sdma_           1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNAT-QDDVFED-TKYLVQSAVDGYNVCI   78 (364)
T ss_dssp             CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCC-HHHHHHT-TTHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEECCCCCC-HHHHHHH-HHHHHHHHHCCCCEEE
T ss_conf             9699999278993662258987599679975873578998547778856499999-8999998-9999999966985035


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             63124787754202667889976664789999999999840135428999604432211664302785446644457888
Q 001657           85 LAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGHA  164 (1036)
Q Consensus        85 layGqtgSGKTyTm~G~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~~~~  164 (1036)
                      ||||||||||||||+|+.   .++|||||++.+||..+........|.|++||+|||||.|+|||.|...          
T Consensus        79 ~aYGqTGSGKTyTm~G~~---~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~----------  145 (364)
T d1sdma_          79 FAYGQTGSGKTFTIYGAD---SNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA----------  145 (364)
T ss_dssp             EEECSTTSSHHHHHTBCS---SSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTS----------
T ss_pred             ECCCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCC----------
T ss_conf             522347877620165676---6551367899998865531034655369999888723632233576545----------


Q ss_pred             CCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCC
Q ss_conf             86445899991577569994897386489929999999999823547530357888899983469999998653035579
Q 001657          165 GKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVS  244 (1036)
Q Consensus       165 ~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q~~~~~~~~  244 (1036)
                            ....+.+++++.++++|.|++++.|.++++++.++..|..+|.+++|.+|..|||||+||+|++.+....    
T Consensus       146 ------~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~----  215 (364)
T d1sdma_         146 ------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ----  215 (364)
T ss_dssp             ------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETT----
T ss_pred             ------CCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCC----
T ss_conf             ------5544331331467602035300011778897898640660004453435410333635999999970367----


Q ss_pred             CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf             99999998998535883255443589743234689862004546641535899999999511014789975568998023
Q 001657          245 PDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKLT  324 (1036)
Q Consensus       245 ~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~IN~sL~aL~~vI~aL~~~~~~~~~~~iPyrdSkLT  324 (1036)
                                ......++|+|||||||||..++++.|.+++|+.+||+||++|++||.+|+.+.+     |||||+||||
T Consensus       216 ----------~~~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~-----~ipyR~SkLT  280 (364)
T d1sdma_         216 ----------TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQ-----HIPYRNHKLT  280 (364)
T ss_dssp             ----------TCCEEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCS-----CCCGGGCHHH
T ss_pred             ----------CCEEEEEEEEEECHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC-----CCCCHHHHHH
T ss_conf             ----------6503567998404100352001466675023323356432068999999974997-----5773011213


Q ss_pred             HHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             442101799950688753399888979899999999995033376543444424899999999999999994
Q 001657          325 RLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELC  396 (1036)
Q Consensus       325 rLLqdsLgGns~t~~I~~vSP~~~~~~ETl~TL~fa~rar~IKnkP~vn~d~~~~ei~~L~~Ei~~Lk~eL~  396 (1036)
                      +||+|+|||||+|+|||||||+..+++||++||+||+||+.|+|+|.+|.+.  .++..|++++..|+.++.
T Consensus       281 ~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~--~~~~~l~~~i~~l~~~~~  350 (364)
T d1sdma_         281 MLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQAG  350 (364)
T ss_dssp             HHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEEC--HHHHHHHTTTTCC-----
T ss_pred             HHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHHHHHHHHHHH
T ss_conf             8878634999509999996987001899999999999984206678355798--999999999999999987



>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure