Citrus Sinensis ID: 001666
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1035 | 2.2.26 [Sep-21-2011] | |||||||
| O81635 | 987 | Kinesin-4 OS=Arabidopsis | yes | no | 0.916 | 0.961 | 0.581 | 0.0 | |
| P79955 | 643 | Carboxy-terminal kinesin | N/A | no | 0.452 | 0.727 | 0.393 | 1e-82 | |
| P46875 | 754 | Kinesin-3 OS=Arabidopsis | no | no | 0.326 | 0.448 | 0.451 | 6e-81 | |
| P46864 | 745 | Kinesin-2 OS=Arabidopsis | no | no | 0.378 | 0.526 | 0.410 | 2e-80 | |
| Q9BVG8 | 833 | Kinesin-like protein KIFC | yes | no | 0.331 | 0.411 | 0.477 | 2e-79 | |
| Q5XI63 | 693 | Kinesin-like protein KIFC | yes | no | 0.381 | 0.569 | 0.416 | 5e-79 | |
| O35231 | 824 | Kinesin-like protein KIFC | yes | no | 0.331 | 0.416 | 0.474 | 7e-79 | |
| P28739 | 770 | Kinesin-like protein klpA | yes | no | 0.381 | 0.512 | 0.425 | 1e-78 | |
| Q9QWT9 | 674 | Kinesin-like protein KIFC | no | no | 0.388 | 0.596 | 0.406 | 8e-78 | |
| F4JGP4 | 790 | Kinesin-5 OS=Arabidopsis | no | no | 0.379 | 0.497 | 0.407 | 3e-77 |
| >sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2 | Back alignment and function desciption |
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Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1047 (58%), Positives = 747/1047 (71%), Gaps = 98/1047 (9%)
Query: 7 LTFNVASVVADVLQKHGPRFSDINLASRKADEASLRRYEAAGWLRKSVGVVVGKDLPAQP 66
L+F+V S+V DVLQ+H R SD+ L SRK +E+SLRRYEAAGWLR +GV GKD P +P
Sbjct: 11 LSFSVVSIVEDVLQQHSSRSSDVGLVSRKVEESSLRRYEAAGWLRDMIGVSNGKDFPGEP 70
Query: 67 SEEEFRLGLRSGIILCNVLNKVQPGAVAKVVEGPCDSVVIPDGAALSAFQYFENVRNFLV 126
SEEEFRLGLRSGI+LCNVLNKV PG+V+KVVE P D + DGAALSAFQYFEN+RNFLV
Sbjct: 71 SEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDD---VADGAALSAFQYFENIRNFLV 127
Query: 127 AAEELGLPTFEASDLEQGGKSAMARIVNCVLALKSYSEWKQGGEKGPWKYAGNLKPSICV 186
A EE+GLP+FEASD+E+GGKS RIVNC+LALKSYSEWK GE GPW+Y N+K +
Sbjct: 128 AIEEMGLPSFEASDMEKGGKSI--RIVNCILALKSYSEWKLKGENGPWRYGSNMKHNFG- 184
Query: 187 SGKPFMRKTSEPFMNSFSRTSSGGEKSLDGVCSEQALNGDLGHDLNEAGNLRNINVLVRA 246
S K F+RK+SEPF++S SRT +S D + ++Q L+ D G+ R+IN LVR+
Sbjct: 185 SRKLFLRKSSEPFVSSISRT-----QSTDMLSTDQPLSSD--------GDSRSINGLVRS 231
Query: 247 ALSDKKPEEIPITVESMLSKVMEEFERRLANQNELIKTTPKTIQIFGPNNSLTSSS---- 302
++D+K E+IP VES+L+KVMEE ++RL+ NE++K++ K I P + + +
Sbjct: 232 FIADRKHEDIPNVVESVLNKVMEEVQQRLSIHNEMMKSSSKPI----PEDDSSCETVVRS 287
Query: 303 -----------GEGAATETKGKKHANLMSAHNEESKTRLLKQQMLIELQQRDIVELKQTL 351
E + + KK H+EE Q++L+ QQ+ I ELKQTL
Sbjct: 288 QLCDARQHEEAEENSPPQVVEKKFQRTNFEHHEE-------QKILLN-QQKHIQELKQTL 339
Query: 352 HTAKAGMQFLQVKYMEDLDTLGNQLHGLAHAASSYQKVLEENRKLYNQVQDLKGNIRVYC 411
+T KAGM+ LQ+KY ED LG L+GLA+AA+ Y++VLEENRKLYN VQDLKGNIRVYC
Sbjct: 340 YTTKAGMKLLQMKYQEDFFHLGKHLNGLAYAATGYKRVLEENRKLYNLVQDLKGNIRVYC 399
Query: 412 RVRPFLDGQ-SSFMSTVEHIEKGDIVITTPSKYGKEGRKSFSFNKVFGPNATQAEVFSDT 470
RVRPFL GQ S +S VE I++G I I PSKYGK G+K F FNKVFGP+ATQ EVFSD
Sbjct: 400 RVRPFLPGQESGGLSAVEDIDEGTITIRVPSKYGKAGQKPFMFNKVFGPSATQEEVFSDM 459
Query: 471 RSLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALNDLFLISNQRRDT 530
+ L+RSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRAL DLFL+SNQR+DT
Sbjct: 460 QPLVRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALADLFLLSNQRKDT 519
Query: 531 IHYDIFVQMLEIYNEQVRDLLVTDGLNKKLEIRNSSQNRINVPDANLVPVSSTNDVIEMM 590
Y+I VQMLEIYNEQVRDLL DG K+LEIRN+S N INVP+A+LVPVSST+DVI++M
Sbjct: 520 TSYEISVQMLEIYNEQVRDLLAQDGQTKRLEIRNNSHNGINVPEASLVPVSSTDDVIQLM 579
Query: 591 NLGQKNRAVGATAMNDRSSRSHSCLTVHVQGRDLASGTILRGSMHLVDLAGSERVDKSEV 650
+LG NRAV +TAMNDRSSRSHSC+TVHVQGRDL SG+IL GSMHLVDLAGSERVDKSEV
Sbjct: 580 DLGHMNRAVSSTAMNDRSSRSHSCVTVHVQGRDLTSGSILHGSMHLVDLAGSERVDKSEV 639
Query: 651 TGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHIS 710
TGDRLKEAQHINKSLSALGDVI+SL+QK +HVPYRNSKLTQLLQDSLGG AKTLMFVHIS
Sbjct: 640 TGDRLKEAQHINKSLSALGDVISSLSQKTSHVPYRNSKLTQLLQDSLGGSAKTLMFVHIS 699
Query: 711 PELEALGETISTLKFAERVATVELGAARVNKDSSDVKELKEQIVSLKAALARKDGDLEHL 770
PE + LGETISTLKFAERV +VELGAARVNKD+S+VKELKEQI +LK AL RK G+ +
Sbjct: 700 PEPDTLGETISTLKFAERVGSVELGAARVNKDNSEVKELKEQIANLKMALVRK-GNGNDV 758
Query: 771 QYTS-SSTPERSALKSGGSSPS-KSSCHSLGDFSSNRRQPMEEVGNIQIRNLSASKPRRK 828
Q T+ ER + + +P+ + ++G+ S+N R + ++ + N S + RR
Sbjct: 759 QPTAIPINRERISRRRSLETPTIRPKLPTMGNTSNNSRPQIMDLSGPEAFNDSTASSRRH 818
Query: 829 SLDPRDLL-VSSPPWPMNGTPVPNGKEEDRESSSGDWVDKVMVNKHDLLSRDDNQLVNYE 887
SLD +L+ SSP WP P+ NGK+EDRES SG+W+D KH+ L ++ N
Sbjct: 819 SLDIHELMKSSSPAWPRQ--PL-NGKDEDRESKSGEWID-----KHEELIQNQNPNS--- 867
Query: 888 VENKLLFSEKFYQNHHRDPSKIYPEHPTNRLTASRKDNQDYDVQRSQSEIASTDESDLEA 947
E+FYQ+ +Y QD++VQ + TD EA
Sbjct: 868 -------PEQFYQSMVPQQQSLY------------GGKQDFEVQ------SITDNESDEA 902
Query: 948 AVSDCSEPDSLW----QCNIPKVSNIPSSVASKPKKSHLKAPTKSTETRSFIPSLIPSPP 1003
A SDCS+ D LW Q N+PKVSNI +S KPKK + K +ETRS IPSLIP+ P
Sbjct: 903 ATSDCSDSDLLWRLSVQVNVPKVSNIQNSANPKPKKIQPRT-AKLSETRSLIPSLIPA-P 960
Query: 1004 TRKLSNGVSPFLHKPGRQLSLVDGKRK 1030
+++ N V+ +P R DGKR+
Sbjct: 961 SKRPPNTVNSQPQRPTR-----DGKRR 982
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Microtubule-binding motor protein. Arabidopsis thaliana (taxid: 3702) |
| >sp|P79955|CTK2_XENLA Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1 | Back alignment and function description |
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| >sp|P46875|ATK3_ARATH Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1 | Back alignment and function description |
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| >sp|P46864|ATK2_ARATH Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9BVG8|KIFC3_HUMAN Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q5XI63|KIFC1_RAT Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O35231|KIFC3_MOUSE Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4 | Back alignment and function description |
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| >sp|P28739|KLPA_EMENI Kinesin-like protein klpA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=klpA PE=2 SV=3 | Back alignment and function description |
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| >sp|Q9QWT9|KIFC1_MOUSE Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc1 PE=1 SV=2 | Back alignment and function description |
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| >sp|F4JGP4|ATK5_ARATH Kinesin-5 OS=Arabidopsis thaliana GN=ATK5 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1035 | ||||||
| 147791474 | 1058 | hypothetical protein VITISV_015888 [Viti | 0.986 | 0.965 | 0.684 | 0.0 | |
| 296089742 | 1044 | unnamed protein product [Vitis vinifera] | 0.986 | 0.977 | 0.683 | 0.0 | |
| 224123000 | 981 | predicted protein [Populus trichocarpa] | 0.938 | 0.989 | 0.678 | 0.0 | |
| 359487657 | 1056 | PREDICTED: kinesin-4-like [Vitis vinifer | 0.971 | 0.952 | 0.664 | 0.0 | |
| 255542830 | 1051 | kinesin heavy chain, putative [Ricinus c | 0.958 | 0.943 | 0.649 | 0.0 | |
| 255564276 | 1012 | kinesin heavy chain, putative [Ricinus c | 0.963 | 0.985 | 0.643 | 0.0 | |
| 359479934 | 1011 | PREDICTED: kinesin-4-like [Vitis vinifer | 0.961 | 0.984 | 0.636 | 0.0 | |
| 297743934 | 1017 | unnamed protein product [Vitis vinifera] | 0.966 | 0.983 | 0.634 | 0.0 | |
| 127519339 | 1015 | kinesin-related protein [Gossypium hirsu | 0.970 | 0.989 | 0.631 | 0.0 | |
| 224068400 | 1003 | predicted protein [Populus trichocarpa] | 0.953 | 0.984 | 0.622 | 0.0 |
| >gi|147791474|emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1382 bits (3576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/1060 (68%), Positives = 843/1060 (79%), Gaps = 39/1060 (3%)
Query: 6 VLTFNVASVVADVLQKHGPRFSDINLASRKADEASLRRYEAAGWLRKSVGVVVGKDLPAQ 65
VL F+VASVV DVLQ+ G R SD++LASRKA+EASLRRYEAAGWLR+ VGVV G+DL A+
Sbjct: 8 VLDFSVASVVEDVLQQQGNRLSDVDLASRKAEEASLRRYEAAGWLRRMVGVVGGRDLAAE 67
Query: 66 PSEEEFRLGLRSGIILCNVLNKVQPGAVAKVVEGPCDSVVIPDGAALSAFQYFENVRNFL 125
PSEEEFRLGLRSGIILCN LNKVQPGAV+KVVEG DSVV PDGAALSAFQYFENVRNFL
Sbjct: 68 PSEEEFRLGLRSGIILCNALNKVQPGAVSKVVEGTYDSVVTPDGAALSAFQYFENVRNFL 127
Query: 126 VAAEELGLPTFEASDLEQGGKSAMARIVNCVLALKSYSEWKQGGEKGPWKYAGNLKPSIC 185
VA EE+GLP+FEASDLEQGGKSA RIVNCVLALKSY WKQGG G WKY G KP I
Sbjct: 128 VALEEMGLPSFEASDLEQGGKSA--RIVNCVLALKSYYNWKQGGGNGSWKYGGTCKPPI- 184
Query: 186 VSGKPFMRKTSEPFMNSFSRTSSGGEKSLDGVCSEQALNGDLGHDLNEAGNLRNINVLVR 245
SGK F R+ SEPF+NSFSR+SS ++SLDG +EQ LN DLG+D +E R N LVR
Sbjct: 185 -SGKQFARRNSEPFVNSFSRSSSISDRSLDGFSNEQFLNSDLGNDPSEMNTSRPFNTLVR 243
Query: 246 AALSDKKPEEIPITVESMLSKVMEEFERRLANQNELIKTTPKTIQIFGPNNSLT------ 299
AALSDKK EEIP VES+LSKVMEEFE RL +QNEL+K TPK + G NNSL+
Sbjct: 244 AALSDKKQEEIPNIVESLLSKVMEEFEIRLTSQNELMKPTPKDAAVSGLNNSLSRTASGE 303
Query: 300 ------SSSGEG------AATETKGKKHA--NLMSAHNEESKTRLLKQQMLIELQQRDIV 345
S+SGE A+ +TK K N H+EES+ LKQQ+L E Q+RD+
Sbjct: 304 HNSLSRSASGENNALSQSASGDTKIIKEECYNQDDTHDEESERPFLKQQLLFEQQRRDLQ 363
Query: 346 ELKQTLHTAKAGMQFLQVKYMEDLDTLGNQLHGLAHAASSYQKVLEENRKLYNQVQDLKG 405
ELK TLH+ KAGMQF+Q+KY E+ + LGN LHGL HAAS Y++VLEENRKLYNQ+QDLKG
Sbjct: 364 ELKHTLHSTKAGMQFMQMKYHEEFENLGNHLHGLVHAASGYRRVLEENRKLYNQLQDLKG 423
Query: 406 NIRVYCRVRPFLDGQSSFMSTVEHIEKGDIVITTPSKYGKEGRKSFSFNKVFGPNATQAE 465
+IRVYCRVRPFLDGQ +S+V+ IE+G I I TPSKYGKEGRKSF+FNKVFGP+ATQ E
Sbjct: 424 SIRVYCRVRPFLDGQPKCLSSVDQIEEGSISIITPSKYGKEGRKSFNFNKVFGPSATQEE 483
Query: 466 VFSDTRSLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALNDLFLISN 525
VFSDT+ LIRSVLDGYNVCIFAYGQTGSGKT+TMTGPKELTEE LGVNYRAL+DLF +S
Sbjct: 484 VFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKELTEEGLGVNYRALSDLFHLSE 543
Query: 526 QRRDTIHYDIFVQMLEIYNEQVRDLLVTDGLNKK--------LEIRNSSQNRINVPDANL 577
QR+ T+HY++ VQM+EIYNEQVRDLLVTDGLNKK +EIRNSSQN INVPDANL
Sbjct: 544 QRKGTLHYEVSVQMIEIYNEQVRDLLVTDGLNKKYPFLLHGSVEIRNSSQNGINVPDANL 603
Query: 578 VPVSSTNDVIEMMNLGQKNRAVGATAMNDRSSRSHSCLTVHVQGRDLASGTILRGSMHLV 637
VPVSST+DVI +MNLGQKNR V ATA+NDRSSRSHSC+TVHVQGRDL SG ++RGS+HLV
Sbjct: 604 VPVSSTSDVIYLMNLGQKNRVVSATALNDRSSRSHSCVTVHVQGRDLTSGAVIRGSLHLV 663
Query: 638 DLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSL 697
DLAGSERVDKSEVTG LKEAQHIN+SLSALGDVIASLAQKN+HVPYRNSKLTQLLQDSL
Sbjct: 664 DLAGSERVDKSEVTGAGLKEAQHINRSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSL 723
Query: 698 GGQAKTLMFVHISPELEALGETISTLKFAERVATVELGAARVNKDSSDVKELKEQIVSLK 757
GGQAKTLMFVHISPE EALGETISTLKFAERV+TVELGAARVNK+SSDVKEL+EQI +LK
Sbjct: 724 GGQAKTLMFVHISPEPEALGETISTLKFAERVSTVELGAARVNKESSDVKELREQIANLK 783
Query: 758 AALARKDGDLEHLQYTSSSTPERSALKSGGSSPSKSSCHSLGDFSSNRRQPMEEVGNIQI 817
AALARK+G+ EH Y+ SS+PER +KS GSSPS S S+ D S +RRQPME+VGNIQ+
Sbjct: 784 AALARKEGESEHQMYSRSSSPERLKMKSRGSSPSLPSLRSVADISGSRRQPMEDVGNIQV 843
Query: 818 RNLSASKPRRKSLDPRDLLVSSPPWPMNGTPVPNGKEEDR-ESSSGDWVDKVMVNKHDLL 876
RN SA KPRR+S D DL +S W +P + ++ED E SGDWVDK M+NK +
Sbjct: 844 RNNSALKPRRQSFDLHDLAKASAAWKTGSSPAMSSQKEDEGEIGSGDWVDKAMLNKQYNV 903
Query: 877 SRDDNQLVNYEVENKLLFSEKFYQNHHRDPSKIYPEHPTNRLTASRKDNQDYDVQRSQSE 936
SRD N ++E +N+ L E F+Q H +P+KIYPE P N+ + ++KD +DYD QR++ E
Sbjct: 904 SRDRNSPGSWEEDNRQL-PEMFFQTHLPNPAKIYPEQPFNKFSTNQKDGRDYDGQRNRFE 962
Query: 937 IASTDESDLEAAVSDCSEPDSLW-QCNIPKVSNIPSSVASKPKKSHLKAPTKSTETRSFI 995
+A+ D +LEAA SDCSE D LW Q N+P+VSNIP+ + SK K+++ K KS E RS I
Sbjct: 963 VATDDSDELEAATSDCSEQDLLWQQLNLPRVSNIPNGLGSKNKRTNSKL-VKSPEKRSLI 1021
Query: 996 PSLIPSPPTRKLSNGVSPFLHKPGRQLSLVDGKRKTGHAK 1035
PSL S +RKL G+SP LH+ RQ VDGK++TG+AK
Sbjct: 1022 PSLGTS-ASRKLPIGISPPLHR--RQAVAVDGKQRTGNAK 1058
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089742|emb|CBI39561.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224123000|ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|222857345|gb|EEE94892.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359487657|ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255542830|ref|XP_002512478.1| kinesin heavy chain, putative [Ricinus communis] gi|223548439|gb|EEF49930.1| kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255564276|ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus communis] gi|223537697|gb|EEF39320.1| kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|359479934|ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297743934|emb|CBI36904.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|127519339|gb|ABO28522.1| kinesin-related protein [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|224068400|ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|222844462|gb|EEE82009.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1035 | ||||||
| TAIR|locus:2061992 | 983 | AT2G47500 [Arabidopsis thalian | 0.724 | 0.762 | 0.678 | 1.9e-289 | |
| TAIR|locus:2148543 | 987 | ATK4 "kinesin 4" [Arabidopsis | 0.814 | 0.854 | 0.624 | 1.5e-287 | |
| TAIR|locus:2195316 | 1010 | AT1G09170 [Arabidopsis thalian | 0.473 | 0.485 | 0.529 | 3.7e-227 | |
| TAIR|locus:2101645 | 1087 | KP1 "kinesin-like protein 1" [ | 0.505 | 0.481 | 0.558 | 8.5e-186 | |
| TAIR|locus:2026639 | 1071 | AT1G63640 [Arabidopsis thalian | 0.445 | 0.430 | 0.580 | 1.6e-147 | |
| TAIR|locus:2027854 | 1025 | AT1G73860 [Arabidopsis thalian | 0.516 | 0.521 | 0.513 | 3.9e-140 | |
| TAIR|locus:2014129 | 1140 | AT1G18410 [Arabidopsis thalian | 0.472 | 0.428 | 0.544 | 1.8e-133 | |
| TAIR|locus:2076289 | 922 | AT3G10310 [Arabidopsis thalian | 0.193 | 0.216 | 0.666 | 1.4e-119 | |
| UNIPROTKB|F1RF39 | 877 | KIFC3 "Uncharacterized protein | 0.330 | 0.389 | 0.484 | 5.8e-82 | |
| ZFIN|ZDB-GENE-030131-3724 | 937 | kifc3 "kinesin family member C | 0.330 | 0.364 | 0.473 | 8.2e-81 |
| TAIR|locus:2061992 AT2G47500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2570 (909.7 bits), Expect = 1.9e-289, Sum P(2) = 1.9e-289
Identities = 521/768 (67%), Positives = 612/768 (79%)
Query: 2 TTEQVLTFNVASVVADVLQKHGPRFSDINLASRKADEASLRRYEAAGWLRKSVGVVVGKD 61
T + L+F VASV+ DVLQ+HG D +L SR+A+EA+ RRYEAA WLR+ VGVV KD
Sbjct: 6 TEDGGLSFTVASVMEDVLQQHGNGLRDHDLVSRRAEEAASRRYEAANWLRRMVGVVGAKD 65
Query: 62 LPAQPSEEEFRLGLRSGIILCNVLNKVQPGAVAKVVEGPCDSVVIPDGAALSAFQYFENV 121
LPA+P+EE RLGLRSGIILC VLNKVQPGAV+KVVE PCD++++ DGA LSAFQYFENV
Sbjct: 66 LPAEPTEEGLRLGLRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFENV 125
Query: 122 RNFLVAAEELGLPTFEASDLEQGGKSAMARIVNCVLALKSYSEWKQGGEKGPWKYAGNLK 181
RNFLVA +E+G PTFEASDLEQGG ++ R+VNCVLA+KSY EWKQ G G WK+ GN+K
Sbjct: 126 RNFLVAIQEMGFPTFEASDLEQGGNAS--RVVNCVLAIKSYDEWKQSGGIGVWKFGGNIK 183
Query: 182 PSICVSGKPFMRKTSEPFMNSFSRTSSGGEKSLDGVCSEQALNGDLGHDLNEAGNLRNIN 241
P + F+RK SEPFMNS SRTSS + +E+A + + D N+ + +++
Sbjct: 184 PP-ALGKSSFVRKNSEPFMNSLSRTSS--------INNEKAPSEN---DSNKLSSPSSLS 231
Query: 242 VLVRAALSDKKPEEIPITVESMLSKVMEEFERRLANQNELIKTTPKTIQIFGPNNSLTSS 301
LVRA LSDKKPE++P +ES+LSKV+EEFE R+ NQ EL++ P+ N S
Sbjct: 232 TLVRAVLSDKKPEDVPKLIESLLSKVVEEFENRVTNQYELVRAAPRESTSSQNNRSFLKP 291
Query: 302 SGEGAATET--KG-KKHANLMSAHNEESKTRLLKQQMLIELQQRDIVELKQTLHTAKAGM 358
GE E K KK + +E+ KTR KQ + QQ DI L+QTL+T +AGM
Sbjct: 292 LGEREREEKSFKAIKKDDHNSQILDEKMKTRQFKQLTIFNQQQEDIEGLRQTLYTTRAGM 351
Query: 359 QFLQVKYMEDLDTLGNQLHGLAHAASSYQKVLEENRKLYNQVQDLKGNIRVYCRVRPFLD 418
QF+Q K+ E+ +LG +HGLAHAAS Y +VLEENRKLYNQVQDLKG+IRVYCRVRPFL
Sbjct: 352 QFMQKKFQEEFSSLGMHVHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLP 411
Query: 419 GQSSFMSTVEHIEKGDIVITTPSKYGKEGRKSFSFNKVFGPNATQAEVFSDTRSLIRSVL 478
GQSSF ST+ ++E I I T S++GK KSF+FNKVFGP+ATQ EVFSD + LIRSVL
Sbjct: 412 GQSSFSSTIGNMEDDTIGINTASRHGKS-LKSFTFNKVFGPSATQEEVFSDMQPLIRSVL 470
Query: 479 DGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALNDLFLISNQRRDTIHYDIFVQ 538
DGYNVCIFAYGQTGSGKTFTM+GP++LTE+S GVNYRAL DLFL++ QR+DT YDI VQ
Sbjct: 471 DGYNVCIFAYGQTGSGKTFTMSGPRDLTEKSQGVNYRALGDLFLLAEQRKDTFRYDIAVQ 530
Query: 539 MLEIYNEQVRDLLVTDGLNKKLEIRNSSQNRINVPDANLVPVSSTNDVIEMMNLGQKNRA 598
M+EIYNEQVRDLLVTDG NK+LEIRNSSQ ++VPDA+LVPVSST DVI++M G KNRA
Sbjct: 531 MIEIYNEQVRDLLVTDGSNKRLEIRNSSQKGLSVPDASLVPVSSTFDVIDLMKTGHKNRA 590
Query: 599 VGATAMNDRSSRSHSCLTVHVQGRDLASGTILRGSMHLVDLAGSERVDKSEVTGDRLKEA 658
VG+TA+NDRSSRSHSCLTVHVQGRDL SG +LRG MHLVDLAGSERVDKSEVTGDRLKEA
Sbjct: 591 VGSTALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEVTGDRLKEA 650
Query: 659 QHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPELEALGE 718
QHIN+SLSALGDVIASLA KN HVPYRNSKLTQLLQDSLGGQAKTLMFVHISPE +A+GE
Sbjct: 651 QHINRSLSALGDVIASLAHKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEADAVGE 710
Query: 719 TISTLKFAERVATVELGAARVNKDSSDVKELKEQIVSLKAALARKDGD 766
TISTLKFAERVATVELGAARVN D+SDVKELKEQI +LKAALARK+ +
Sbjct: 711 TISTLKFAERVATVELGAARVNNDTSDVKELKEQIATLKAALARKEAE 758
|
|
| TAIR|locus:2148543 ATK4 "kinesin 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195316 AT1G09170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2101645 KP1 "kinesin-like protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2026639 AT1G63640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027854 AT1G73860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014129 AT1G18410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2076289 AT3G10310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RF39 KIFC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-3724 kifc3 "kinesin family member C3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O81635 | ATK4_ARATH | No assigned EC number | 0.5816 | 0.9169 | 0.9614 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_Genewise1_v1.C_LG_XIII0676 | hypothetical protein (981 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1035 | |||
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 1e-170 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-147 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-141 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-127 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 1e-100 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-96 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 3e-95 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 3e-93 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 7e-91 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 7e-87 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 6e-84 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 7e-79 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 6e-76 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 1e-75 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 2e-75 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 1e-71 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 6e-71 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 1e-55 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 4e-43 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 6e-13 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 8e-11 | |
| smart00033 | 101 | smart00033, CH, Calponin homology domain | 1e-10 | |
| cd00014 | 107 | cd00014, CH, Calponin homology domain; actin-bindi | 8e-09 | |
| pfam00307 | 104 | pfam00307, CH, Calponin homology (CH) domain | 2e-07 | |
| COG5261 | 1054 | COG5261, IQG1, Protein involved in regulation of c | 4e-04 |
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
Score = 500 bits (1291), Expect = e-170
Identities = 180/335 (53%), Positives = 232/335 (69%), Gaps = 9/335 (2%)
Query: 404 KGNIRVYCRVRPFL-DGQSSFMSTVEHIEKGDIVITTPSKYGKEGRKSFSFNKVFGPNAT 462
KGNIRV+CRVRP L + + S + ++ I GK +KSFSF++VF P+A+
Sbjct: 1 KGNIRVFCRVRPLLPSESTEYSSVISFPDEDGGTIELSKGTGK--KKSFSFDRVFDPDAS 58
Query: 463 QAEVFSDTRSLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALNDLFL 522
Q +VF + L++S LDGYNVCIFAYGQTGSGKT+TM GP E+ G+ RAL LF
Sbjct: 59 QEDVFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMEGP----PENPGIIPRALEQLFN 114
Query: 523 ISNQRRD-TIHYDIFVQMLEIYNEQVRDLLVTDGLN-KKLEIRNSSQNRINVPDANLVPV 580
+ + ++ Y I MLEIYNE +RDLL T KKLEI++ S+ V + VPV
Sbjct: 115 TAEELKEKGWSYTITASMLEIYNETIRDLLATKPAPKKKLEIKHDSKGETYVTNLTEVPV 174
Query: 581 SSTNDVIEMMNLGQKNRAVGATAMNDRSSRSHSCLTVHVQGRDLASGTILRGSMHLVDLA 640
SS +V ++NLG KNR+V +T MN+ SSRSH+ + ++G +L +G RG ++LVDLA
Sbjct: 175 SSPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQTGEQTRGKLNLVDLA 234
Query: 641 GSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSLGGQ 700
GSER+ KS TGDRLKEAQ INKSLSALGDVI++L K++HVPYRNSKLT LLQDSLGG
Sbjct: 235 GSERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSLGGN 294
Query: 701 AKTLMFVHISPELEALGETISTLKFAERVATVELG 735
+KTLMFV+ISP L ET+ +L+FA RV +VELG
Sbjct: 295 SKTLMFVNISPLESNLSETLCSLRFASRVRSVELG 329
|
Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|214479 smart00033, CH, Calponin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|237981 cd00014, CH, Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity) | Back alignment and domain information |
|---|
| >gnl|CDD|215849 pfam00307, CH, Calponin homology (CH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|227586 COG5261, IQG1, Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1035 | |||
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| KOG2046 | 193 | consensus Calponin [Cytoskeleton] | 99.89 | |
| COG5199 | 178 | SCP1 Calponin [Cytoskeleton] | 99.73 | |
| cd00014 | 107 | CH Calponin homology domain; actin-binding domain | 99.55 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 99.47 | |
| COG5261 | 1054 | IQG1 Protein involved in regulation of cellular mo | 99.46 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.44 | |
| KOG2996 | 865 | consensus Rho guanine nucleotide exchange factor V | 99.42 | |
| smart00033 | 103 | CH Calponin homology domain. Actin binding domains | 99.41 | |
| PF00307 | 108 | CH: Calponin homology (CH) domain; InterPro: IPR00 | 99.28 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 98.96 | |
| KOG0046 | 627 | consensus Ca2+-binding actin-bundling protein (fim | 97.59 | |
| PF11971 | 85 | CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 T | 97.54 | |
| PF06395 | 89 | CDC24: CDC24 Calponin; InterPro: IPR010481 This is | 96.73 | |
| KOG0046 | 627 | consensus Ca2+-binding actin-bundling protein (fim | 94.91 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 93.1 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 91.17 | |
| TIGR01242 | 364 | 26Sp45 26S proteasome subunit P45 family. Many pro | 90.59 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 88.06 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 87.95 | |
| KOG0517 | 2473 | consensus Beta-spectrin [Cytoskeleton] | 87.79 | |
| COG5069 | 612 | SAC6 Ca2+-binding actin-bundling protein fimbrin/p | 87.47 | |
| PRK06620 | 214 | hypothetical protein; Validated | 87.07 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 86.92 | |
| PRK12377 | 248 | putative replication protein; Provisional | 86.79 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 86.26 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 85.91 | |
| PRK08116 | 268 | hypothetical protein; Validated | 85.17 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 84.85 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 84.84 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 84.17 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 83.94 | |
| PRK03992 | 389 | proteasome-activating nucleotidase; Provisional | 82.94 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 82.6 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 82.44 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 82.42 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 82.08 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 81.9 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 81.47 | |
| PTZ00454 | 398 | 26S protease regulatory subunit 6B-like protein; P | 81.14 | |
| PRK09087 | 226 | hypothetical protein; Validated | 80.89 | |
| COG1484 | 254 | DnaC DNA replication protein [DNA replication, rec | 80.38 |
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-91 Score=837.65 Aligned_cols=422 Identities=48% Similarity=0.710 Sum_probs=394.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHhhhhhhhcCCCCEEEEEE
Q 001666 336 LIELQQRDIVELKQTLHTAKAGMQFLQVKYMEDLDTLGNQLHGLAHAASSYQKVL---EENRKLYNQVQDLKGNIRVYCR 412 (1035)
Q Consensus 336 ~~~~~~~~~~~l~~~l~~~k~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~---~e~r~L~n~~qdlkGnIRV~~R 412 (1035)
.+..++.++++|+..+..++.++..++..+++.+.....++.+|+.+...|.... ++||+|||+++|||||||||||
T Consensus 242 ~i~~l~~~l~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~e~~~r~kL~N~i~eLkGnIRV~CR 321 (670)
T KOG0239|consen 242 KIQALQQELEELKAELKELNDQVSLLTREVQEALKESNTLQSDLESLEENLVEKKKEKEERRKLHNEILELKGNIRVFCR 321 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCceEEEE
Confidence 3888999999999999999999999999999999999888999998888888777 8999999999999999999999
Q ss_pred eCCCCCCCCC-CCccEEEecC-CcEEEEcCCCCCCCCCeEEEeceeeCCCCchHhHHHhhHHHHHHHhcCcceeEEeecc
Q 001666 413 VRPFLDGQSS-FMSTVEHIEK-GDIVITTPSKYGKEGRKSFSFNKVFGPNATQAEVFSDTRSLIRSVLDGYNVCIFAYGQ 490 (1035)
Q Consensus 413 VRP~~~~E~~-~~~~v~~i~~-~~i~i~~p~~~gk~~~k~F~FD~VF~~~atQeeVf~~v~pLV~svLdG~N~~IfAYGq 490 (1035)
|||+++++.. ....+...++ +.+.+..|....+...+.|.||+||+|.++|++||.++.|+|+++|||||+|||||||
T Consensus 322 vRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fdkVf~p~~sQ~~VF~e~~~lv~S~lDGYnVCIFAYGQ 401 (670)
T KOG0239|consen 322 VRPLLPSEKQRLQSKVIDTEEQGEVQVDSPDKGDKLEPQSFKFDKVFGPLASQDDVFEEVSPLVQSALDGYNVCIFAYGQ 401 (670)
T ss_pred ecCCCccccccccccccccCCcceeEeecCCCCCCCccccceeeeecCCcccHHHHHHHHHHHHHHHhcCcceeEEEecc
Confidence 9999998876 3444554443 5688888877666556689999999999999999999999999999999999999999
Q ss_pred CCCCCceEecCCCCCCccchhhHHHHHHHHHHhhhccCCCeEEEEEEEEEEEecCeeeecccCCCCCcceeeecCCCCCc
Q 001666 491 TGSGKTFTMTGPKELTEESLGVNYRALNDLFLISNQRRDTIHYDIFVQMLEIYNEQVRDLLVTDGLNKKLEIRNSSQNRI 570 (1035)
Q Consensus 491 TGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~~~~~~~~l~Ired~~~gv 570 (1035)
|||||||||.|| +++++|||||++++||..+.....+|.|.+.++|+|||||.|+|||.++....++.|+++.++.+
T Consensus 402 TGSGKTyTM~G~---~~~~~Giipral~~lF~~~~~~~~g~~y~~~~s~~EIYNe~i~DlL~~~~~~~k~~I~~~~~~~~ 478 (670)
T KOG0239|consen 402 TGSGKTYTMSGP---TPEDPGIIPRALEKLFRTITSLKSGWKYDKTVSMLEIYNEAIRDLLSDESYVGKLEIVDDAEGNL 478 (670)
T ss_pred cCCCccccccCC---CcccCCccHHHHHHHHHHHHhhccCceEEeeeehhHHHHHHHHHhccccccccceeEEEcCCCce
Confidence 999999999997 56789999999999999999888899999999999999999999998875567899999999999
Q ss_pred ccCCCeEEEcCCHHHHHHHHHhhhhccccccccccCCCCCcceEEEEEEeeeecCCCcEEEEeeEeeecCCCcccccccc
Q 001666 571 NVPDANLVPVSSTNDVIEMMNLGQKNRAVGATAMNDRSSRSHSCLTVHVQGRDLASGTILRGSMHLVDLAGSERVDKSEV 650 (1035)
Q Consensus 571 ~V~glt~v~V~S~eev~~ll~~g~~nR~v~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~skL~LVDLAGSER~~ks~a 650 (1035)
+|++++.+.|.+.+|+..+++.|.+||++++|.+|++|||||+||+|+|.+.+...+....|+|+|||||||||++++++
T Consensus 479 ~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~v~v~g~~~~t~~~~~g~l~LVDLAGSER~~~s~~ 558 (670)
T KOG0239|consen 479 MVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFRVRIRGINELTGIRVTGVLNLVDLAGSERVSKSGV 558 (670)
T ss_pred ecccceEEecCCHHHHHHHHHHhhccccccccccchhhhccceEEEEEEeccccCcccccccceeEeecccCcccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCcchhhhhhccCCCcceeeEEecCCccccHHHHHHHHHHHHHhh
Q 001666 651 TGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPELEALGETISTLKFAERVA 730 (1035)
Q Consensus 651 ~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGnskT~mI~~ISP~~~~~~ETLsTLrFA~Rak 730 (1035)
+|+|++|+++||+||++||+||.||++++.||||||||||+|||++|||++||+|||+|||...++.||+++|+||+||+
T Consensus 559 tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPyRNSKLT~lLq~sLGG~sKTLmfv~isP~~~~~~Etl~sL~FA~rv~ 638 (670)
T KOG0239|consen 559 TGERLKEAQNINKSLSALGDVISALASKRSHIPYRNSKLTQLLQDSLGGDSKTLMFVNISPAAAALFETLCSLRFATRVR 638 (670)
T ss_pred chhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcccccchHHHhHhhhCCccceeeEEEeCccHHHHhhhhhccchHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccccCChHHHHHHHHHHHHHHHHH
Q 001666 731 TVELGAARVNKDSSDVKELKEQIVSLKAAL 760 (1035)
Q Consensus 731 ~I~~~~~~~n~~~~~i~eLk~eI~~Lk~~L 760 (1035)
.+++|+++.+....+...++..+..++...
T Consensus 639 ~~~lG~a~~~~~~~~~~~~~~~~~~~~~~~ 668 (670)
T KOG0239|consen 639 SVELGSARKQVSTSDDVSLKRFGQLEKLST 668 (670)
T ss_pred ceecccccccccccchhhhhhhhhhhhhhh
Confidence 999999999999888888888777776554
|
|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG2046 consensus Calponin [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5199 SCP1 Calponin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity) | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00033 CH Calponin homology domain | Back alignment and domain information |
|---|
| >PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins [] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins | Back alignment and domain information |
|---|
| >PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain | Back alignment and domain information |
|---|
| >KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >TIGR01242 26Sp45 26S proteasome subunit P45 family | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0517 consensus Beta-spectrin [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PRK03992 proteasome-activating nucleotidase; Provisional | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1035 | ||||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 3e-76 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 2e-75 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 1e-74 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-69 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 5e-69 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 8e-69 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 4e-68 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 7e-68 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 9e-68 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 2e-67 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 2e-66 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 3e-66 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 2e-65 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 5e-64 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-63 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-63 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-63 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-60 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 2e-59 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 5e-56 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 4e-55 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 1e-54 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 2e-54 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 6e-54 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 7e-54 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 9e-54 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-53 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 2e-52 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 2e-51 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 3e-51 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 3e-51 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 3e-51 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 3e-51 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 4e-51 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 4e-51 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 4e-51 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 5e-51 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 5e-51 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 2e-50 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 2e-50 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-50 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 4e-50 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 4e-50 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 5e-50 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 3e-48 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 8e-48 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-47 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 8e-44 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 1e-43 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 6e-41 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 2e-38 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 4e-36 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 4e-36 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 7e-33 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 1e-32 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 2e-29 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 1e-14 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 4e-14 | ||
| 1wyn_A | 146 | Solution Structure Of The Ch Domain Of Human Calpon | 4e-07 | ||
| 1wyp_A | 136 | Solution Structure Of The Ch Domain Of Human Calpon | 4e-06 | ||
| 1h67_A | 108 | Nmr Structure Of The Ch Domain Of Calponin Length = | 2e-05 |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
|
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|1WYN|A Chain A, Solution Structure Of The Ch Domain Of Human Calponin-2 Length = 146 | Back alignment and structure |
| >pdb|1WYP|A Chain A, Solution Structure Of The Ch Domain Of Human Calponin 1 Length = 136 | Back alignment and structure |
| >pdb|1H67|A Chain A, Nmr Structure Of The Ch Domain Of Calponin Length = 108 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
Score = 598 bits (1545), Expect = 0.0
Identities = 149/420 (35%), Positives = 228/420 (54%), Gaps = 12/420 (2%)
Query: 347 LKQTLHTAKAGMQFLQVKYMEDLDTLGNQLHGLAHAASSYQKVLEENRKLYNQVQDLKGN 406
+ + L+ + E L Q L + E ++L+N V DL+ N
Sbjct: 1 MGSMHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDN 60
Query: 407 IRVYCRVRPFLDGQSSFMSTVEHIE---KGDIVITTPSKYGKEGRKSFSFNKVFGPNATQ 463
IRV+CR+RP L+ + + M ++ K G++ FSF++VF P ++Q
Sbjct: 61 IRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQ 120
Query: 464 AEVFSDTRSLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALNDLF-L 522
+++F LI+S LDGYN+CIFAYGQTGSGKT+TM G ES+GV R ++ LF
Sbjct: 121 SDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVIPRTVDLLFDS 176
Query: 523 ISNQRRDTIHYDIFVQMLEIYNEQVRDLLVTDGLNKKLEIRNSSQNRINVPDANLVPVSS 582
I R Y+I LEIYNE + DLL + + ++ + +++N I V + V
Sbjct: 177 IRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLD 236
Query: 583 TNDVIEMMNLGQKNRAVGATAMNDRSSRSHSCLTVHVQGRDLASGTILRGSMHLVDLAGS 642
N + +M+ + NRA +TA N+RSSRSH+ + + GR I GS++LVDLAGS
Sbjct: 237 PNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGS 296
Query: 643 ERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSLGGQAK 702
E T R+ E ++IN+SLS L +VI +L QK H+PYRNSKLT LL SLGG +K
Sbjct: 297 ES----PKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 352
Query: 703 TLMFVHISPELEALGETISTLKFAERVATVELGAARVNKDSSDVKELKEQIVSLKAALAR 762
TLMF+++SP + E++ +L+FA V + ++ A+ N+ ++ + + +
Sbjct: 353 TLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNNSVANSSTQSNNSGSFDK 412
|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
| >1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1 Length = 108 | Back alignment and structure |
|---|
| >2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens} Length = 190 | Back alignment and structure |
|---|
| >1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1 Length = 144 | Back alignment and structure |
|---|
| >1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 136 | Back alignment and structure |
|---|
| >3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
| >1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1 Length = 159 | Back alignment and structure |
|---|
| >1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
| >1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1 Length = 203 | Back alignment and structure |
|---|
| >2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
| >1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 146 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587 | Back alignment and structure |
|---|
| >4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} PDB: 1u0i_A Length = 333 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1035 | ||||
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 9e-90 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 7e-89 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 7e-85 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 3e-84 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-82 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 9e-80 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 2e-78 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 2e-77 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 2e-74 | |
| d1ujoa_ | 144 | a.40.1.1 (A:) Transgelin {Mouse (Mus musculus) [Ta | 3e-22 | |
| d1h67a_ | 108 | a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [T | 5e-20 | |
| d1p2xa_ | 159 | a.40.1.1 (A:) Ras GTPase-activating-like protein r | 2e-12 |
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 289 bits (741), Expect = 9e-90
Identities = 143/355 (40%), Positives = 207/355 (58%), Gaps = 12/355 (3%)
Query: 379 LAHAASSYQKVLEENRKLYNQVQDLKGNIRVYCRVRPFLDGQSSFMSTVEHIEKGDIVI- 437
L + E ++L+N V DL+GNIRV+CR+RP L+ + + M V
Sbjct: 19 LETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVEL 78
Query: 438 --TTPSKYGKEGRKSFSFNKVFGPNATQAEVFSDTRSLIRSVLDGYNVCIFAYGQTGSGK 495
K G++ FSF++VF P ++Q+++F LI+S LDGYN+CIFAYGQTGSGK
Sbjct: 79 QSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGK 138
Query: 496 TFTMTGPKELTEESLGVNYRALNDLF-LISNQRRDTIHYDIFVQMLEIYNEQVRDLLVTD 554
T+TM G ES+GV R ++ LF I R Y+I LEIYNE + DLL +
Sbjct: 139 TYTMDG----VPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNE 194
Query: 555 GLNKKLEIRNSSQNRINVPDANLVPVSSTNDVIEMMNLGQKNRAVGATAMNDRSSRSHSC 614
+ ++ + +++N I V + V N + +M+ + NRA +TA N+RSSRSH+
Sbjct: 195 QKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAV 254
Query: 615 LTVHVQGRDLASGTILRGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIAS 674
+ + GR I GS++LVDLA +S T R+ E ++IN+SLS L +VI +
Sbjct: 255 TKLELIGRHAEKQEISVGSINLVDLA----GSESPKTSTRMTETKNINRSLSELTNVILA 310
Query: 675 LAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPELEALGETISTLKFAERV 729
L QK H+PYRNSKLT LL SLGG +KTLMF+++SP + E++ +L+FA V
Sbjct: 311 LLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASV 365
|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1ujoa_ a.40.1.1 (A:) Transgelin {Mouse (Mus musculus) [TaxId: 10090]} Length = 144 | Back information, alignment and structure |
|---|
| >d1h67a_ a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 108 | Back information, alignment and structure |
|---|
| >d1p2xa_ a.40.1.1 (A:) Ras GTPase-activating-like protein rng2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 159 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1035 | |||
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1ujoa_ | 144 | Transgelin {Mouse (Mus musculus) [TaxId: 10090]} | 99.94 | |
| d1h67a_ | 108 | Calponin {Chicken (Gallus gallus) [TaxId: 9031]} | 99.93 | |
| d1p2xa_ | 159 | Ras GTPase-activating-like protein rng2 {Fission y | 99.9 | |
| d1aoaa1 | 131 | Fimbrin (Plastin), actin-crosslinking domain {Huma | 98.7 | |
| d1pxya_ | 500 | Fimbrin (Plastin), actin-crosslinking domain {Thal | 98.4 | |
| d1sh5a1 | 120 | Actin binding domain of plectin {Human (Homo sapie | 98.36 | |
| d1wjoa_ | 124 | Fimbrin (Plastin), actin-crosslinking domain {Huma | 98.27 | |
| d1rt8a_ | 505 | Fimbrin (Plastin), actin-crosslinking domain {Fiss | 98.19 | |
| d1aoaa2 | 116 | Fimbrin (Plastin), actin-crosslinking domain {Huma | 98.06 | |
| d2qjza1 | 120 | Microtubule-associated protein eb1, N-terminal mic | 98.04 | |
| d1pxya_ | 500 | Fimbrin (Plastin), actin-crosslinking domain {Thal | 97.86 | |
| d1rt8a_ | 505 | Fimbrin (Plastin), actin-crosslinking domain {Fiss | 97.8 | |
| d1dxxa1 | 111 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 97.79 | |
| d1bkra_ | 108 | beta-spectrin {Human (Homo sapiens) [TaxId: 9606]} | 96.68 | |
| d1dxxa2 | 127 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 96.63 | |
| d1sh5a2 | 110 | Actin binding domain of plectin {Human (Homo sapie | 96.52 | |
| d1bhda_ | 108 | Utrophin {Human (Homo sapiens) [TaxId: 9606]} | 96.39 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 94.02 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 86.87 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 85.27 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 84.84 | |
| d1d2na_ | 246 | Hexamerization domain of N-ethylmalemide-sensitive | 83.88 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 82.09 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 81.12 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 80.34 |
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=651.15 Aligned_cols=334 Identities=42% Similarity=0.659 Sum_probs=301.4
Q ss_pred HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEE-EECCCCEEEECCCC--CCCCCCEEEEECEEECCCCCHHHHH
Q ss_conf 99986544211179987899983999999888885279-83089099975899--9997874898131519998657599
Q 001666 391 EENRKLYNQVQDLKGNIRVYCRVRPFLDGQSSFMSTVE-HIEKGDIVITTPSK--YGKEGRKSFSFNKVFGPNATQAEVF 467 (1035)
Q Consensus 391 ~e~r~L~n~~qelkGnIRV~vRVRP~~~~E~~~~~~v~-~i~~~~i~i~~p~~--~gk~~~k~F~FD~VF~~~asQeeVf 467 (1035)
.++|+|||++.|+||||||||||||+.+.|........ ..++..+.+..+.. ......+.|.||+||+++++|++||
T Consensus 31 ~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy 110 (368)
T d2ncda_ 31 MERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIF 110 (368)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEECSCHHHHTTTCCCEEECSEEECTTCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEECCEEECCCCCCCCHH
T ss_conf 99999874899756997999990789901027898579957998699706886556776864667785879999862149
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEEEEECCE
Q ss_conf 836999999764754228742357999762743999997210123789998999861016-8971799999999996570
Q 001666 468 SDTRSLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEESLGVNYRALNDLFLISNQR-RDTIHYDIFVQMLEIYNEQ 546 (1035)
Q Consensus 468 ~~v~pLI~svLdG~NvcIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~-~~~~~~~V~vS~iEIYnE~ 546 (1035)
+.+.|+|+++++|||+||||||||||||||||+| +...+||+||++++||..+... .....|.|.+||+|||||+
T Consensus 111 ~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G----~~~~~Giipr~~~~Lf~~~~~~~~~~~~~~v~vS~~EIyne~ 186 (368)
T d2ncda_ 111 EMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDG----VPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEV 186 (368)
T ss_dssp TTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTE----ETTEECHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSSC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECC----CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCE
T ss_conf 9999889877503651377311578756067136----664434466799987645443202455526899999886560
Q ss_pred EEECCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
Q ss_conf 45435677887610563179997336898299727977999999945310344444566789995228999996565699
Q 001666 547 VRDLLVTDGLNKKLEIRNSSQNRINVPDANLVPVSSTNDVIEMMNLGQKNRAVGATAMNDRSSRSHSCLTVHVQGRDLAS 626 (1035)
Q Consensus 547 V~DLL~~~~~~k~L~Ired~~~gv~V~glt~v~V~S~eev~~lL~~g~~nR~v~sT~~N~~SSRSH~IftI~V~~~~~~~ 626 (1035)
|+|||.+........+++++.+++++.|++++.|.+++++..++..|.++|.++.|.+|.+|||||+||+|++...+...
T Consensus 187 i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~~ssrSh~i~~i~v~~~~~~~ 266 (368)
T d2ncda_ 187 LYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEK 266 (368)
T ss_dssp EEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTTTTTTCEEEEEEEEEEECTTS
T ss_pred EECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 20125642135431130266644233443022047778899999998751124422146545554327899999976698
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEE
Q ss_conf 93789853754167874445653334569999998798999999999971199975589980002222006998301258
Q 001666 627 GTILRGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMF 706 (1035)
Q Consensus 627 ~~~~~skL~LVDLAGSER~~ks~a~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGnskT~mI 706 (1035)
+....|+|+||||||+|+.. .+++++|+.+||+||++|++||.+|++++.|||||+||||+||+|+|||||+|+||
T Consensus 267 ~~~~~s~l~~VDLAGse~~~----~~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPyR~SkLT~lL~dsLggns~t~mI 342 (368)
T d2ncda_ 267 QEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMF 342 (368)
T ss_dssp CCEEEEEEEEEECCCCCCC--------------CTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGSSSSCEEEEE
T ss_pred CCEEEEEEEEEEECCCCCCC----HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
T ss_conf 85676544442201023310----23210245520264999999999986589989975788899989855998709999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 81498644489999999999885023
Q 001666 707 VHISPELEALGETISTLKFAERVATV 732 (1035)
Q Consensus 707 ~~ISP~~~~~~ETLsTLrFA~Rv~~I 732 (1035)
+||||+..+++||++||+||+||+.+
T Consensus 343 ~~isp~~~~~~eTl~TL~fa~rak~~ 368 (368)
T d2ncda_ 343 INVSPFQDCFQESVKSLRFAASVNSC 368 (368)
T ss_dssp EEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99798735499999999999997569
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1ujoa_ a.40.1.1 (A:) Transgelin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1h67a_ a.40.1.1 (A:) Calponin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1p2xa_ a.40.1.1 (A:) Ras GTPase-activating-like protein rng2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1aoaa1 a.40.1.1 (A:121-251) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pxya_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1sh5a1 a.40.1.1 (A:8-127) Actin binding domain of plectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjoa_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rt8a_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1aoaa2 a.40.1.1 (A:260-375) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2qjza1 a.40.1.1 (A:13-132) Microtubule-associated protein eb1, N-terminal microtubule binding domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pxya_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1rt8a_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d1dxxa1 a.40.1.1 (A:9-119) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bkra_ a.40.1.1 (A:) beta-spectrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dxxa2 a.40.1.1 (A:120-246) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sh5a2 a.40.1.1 (A:128-237) Actin binding domain of plectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bhda_ a.40.1.1 (A:) Utrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|