Citrus Sinensis ID: 001679

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030--
MEEEDGNEESFVDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRASKVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSDLQEKVKMMKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVMLEKARQDSRSKDESLRKLEENLQNLENRAKYKDQTYKNQQEKVKELEGQVSLKSNLHDQSDKQASQLLERLKGREELCSTLQIKVKELENRLRDRQQSESAIFQQKVKDIENKLKEQERESESHSISLQHKVKELESKLKEQERQHVESLMLRQKIKELEDKLKEQEQQFQCRLSRDFADLIKYTPNEVKTSKGDDEVMSDIDLRILRSSNSVNRPMSHGSILPRGNGHQHETRKKRDSRSGETENNNILKSSSYENKKRKSDPPRVAATRVMRTAKPVTATIQGPSVHKRINRDQVQGIKERDTKKKIWSR
ccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccEEccccccccccEEEcccccccccccccccccccccccEEEEccccccccEEEEEEEEEEEcccccccEEEEEEEccccccccccEEEEccccccEEEEccccccccccEEEEEEcccccccccccccccccccccccccccHHHHHcccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccccEEEEccccccEEEEEcccccccEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEEEEEcccccccccccccccccEEEEcccccEEEcccEEEEcccHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHccccHHHcccccccccccHHHHHHHHccccccccccc
cccccccHHHHHHcEEEccccEEEccccEEccccccEEEEEEcccccccccccccEEccccccccccEEEccccccccccccEEEEEEEEccEEEEEcccccccEEEEEEEEEEEEcccccccEEEEEEEEccEEEEccEEEEEEcccccEEEEEEEEEEccccEEEEEEEEcccccEEEEEEEEcccccccccccccccEEEccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccccEEEEEEEEcccHHHHHcccEEEEEEcccccEEEccccccccccEEEEccEccccccHHHHHHHcHHHHHHHcccccEEEEEEccccccHHHHHcEccccccccHHHHHHHHHHHHHccccEEEEEEEEEEEEEcHHHHHHcccccccccEcEEEcccccEEEcccccEEEccHHHHHHHHHHHHHHcccccccHHHHHHHcEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHcHHHHHHHHccccccEEEEEEEEccEHHHHHHHHHHHHHHHcccccEccccEccccHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccccccHHHccccccccEEEcccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHcccccccccHccccccccccccccccccccccccccHcccccccccccccEEEcc
meeedgneesfvdsmlcdsnsrlipcgfirsyctgEFVLFvnaggeasdevdcsMKFLGDtyfeggnvlrtnehicdagdypfiyqsarfgnfcyrfndippghyyvdLHFAEIIntngpkgmrVFNVFVQeekvvsdfdifsivgankplqLVDIGVSVKEEGTVVVRfegisgspavsgicirraskvlsvpqtsheflkcnncaaeieVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSDLQEKVKMMKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRgnirvfcrcrplnkveisagcatvvdfdaakdgelgvltgsstrktfkfdrvftpndgqvdvfadasplviSVLDGYNVCIFaygqtgtgktftmegteqsrgvnyRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLlatsptskkleikqssegshhvpgiVEANVNSIREAWNVLQtgssaravgsnnvnehssrsHCMLCIMVRAKnlisgectkskLWLVDlagserltrtdvqGDRLKEAQNINRSLSALGDVIYSLatksnhipyrnskLTHLLQdslggdsktLMFVqispseqdlSETLSSLNFAtqvrgvelgparkqidTSELQKMKVMLEKARQDSRSKDESLRKLEENLQNLENRAKYKDQTYKNQQEKVKELEGQVSLKSNLHDQSDKQASQLLERLKGREELCSTLQIKVKELENRLRDRQQSESAIFQQKVKDIENKLKEqereseshsISLQHKVKELESKLKEQERQHVESLMLRQKIKELEDKLKEQEQQFQCRLSRDFADLikytpnevktskgddevmsdiDLRILRssnsvnrpmshgsilprgnghqhetrkkrdsrsgetennnilksssyenkkrksdpprvaATRVmrtakpvtatiqgpsvhkrinrdqvqgikerdtkkkiwsr
meeedgneesFVDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVrfegisgspavsgICIRRASKVLSVPQTSHEFLKCnncaaeievpsaqkKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINItsryecdkkYWAAAVSDLQEKVKMMKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGcatvvdfdaakdgelgvltgsstrktfkfdrvFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEikqssegshhvpgIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWlvdlagserltrtdvqgdrlkeaqninrslsALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQvrgvelgparkqidtselQKMKVMLEkarqdsrskdeslrKLEENlqnlenrakykdqtyKNQQEKVKELEGQVslksnlhdqsdKQASQLLERLKGREELCSTLQIKVKELenrlrdrqqsesaifqqkVKDIENKLKEqereseshsislqhKVKELESKLKEQERQHVESLMLRQKIKELEDKLKEQEQQFQCRLSRDFADLIkytpnevktskgddevmsdIDLRILrssnsvnrpmshgsilprgnghqhetrkkrdsrsgetennnilksssyenkkrksdpprvaatrvmrtakpvtatiqgpsvhkrinrdqvqgikerdtkkkiwsr
MEEEDGNEESFVDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRASKVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSDLQEKVKMMKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVMLEKARQDSRSKDESLRKLEENLQNLENRAKYKDQTYKNQQEKVKELEGQVSLKSNLHDQSDKQASQLLERLKGREELCSTLQIKVKELENRLRDRQQSESAIFQQKVKDIENKLKEQERESESHSISLQHKVKELESKLKEQERQHVESLMLRqkikeledklkeqeqqFQCRLSRDFADLIKYTPNEVKTSKGDDEVMSDIDLRILRSSNSVNRPMSHGSILPRGNGHQHETRKKRDSRSGETENNNILKSSSYENKKRKSDPPRVAATRVMRTAKPVTATIQGPSVHKRINRDQVQGIKERDTKKKIWSR
*************SMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRASKVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSDL***********************SIPELNKMVIGVQALVAQCEDFKMKYS******KELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLA*********************GIVEANVNSIREAWNVLQT******************SHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDV*********NINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLG***KTLMFV************************************************************************************************************************************************************************************************************************CRLSRDFADLIKYT*******************************************************************************************************************************
***********VDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPA***************************************************************************************************************************************************************************QCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLN***********VDFDAA****************FKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSP***********EGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLT*****GDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPA***************************************************************************************************************************************************************************************************************************************************************************************************************************************
************DSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRASKVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSDLQEKV****************CADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSK***********HHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVM**************LRKLEENLQNLENRAKYKDQTYKNQQEKVKELEGQVSLKSNLHDQSDKQASQLLERLKGREELCSTLQIKVKELENRLRDRQQSESAIFQQKVKDIENKL******************KELESKLKEQERQHVESLMLRQKIKELEDKLKEQEQQFQCRLSRDFADLIKYTPNEVKTSKGDDEVMSDIDLRILRSSNSVNRPMSHGSILP*********************NNNILKSSS**************ATRVMRTAKPVTATIQGPSVHKRINRD*****************
*****GNEESFVDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRASKVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSDLQEKVKMMKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNN*NEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAG********************NRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVMLEKARQDSRSKDESLRKLEENLQNLENRAKYKDQTYKNQQEKVKELEGQVSLKSNLHDQSDKQASQLLERLKGREELCSTLQIKVKELENRLRDRQQSESAIFQQKVKDIENKLKEQERESESHSISLQHKVKELESKLKEQERQHVESLMLRQKIKELEDKLKEQEQQFQCRLSRDFADLIKYTPNEVKTSKGDDEVMSDIDLRILRS*******************************************************************************************************
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MEEEDGNEESFVDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNVLRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNVFVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRASKVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKAxxxxxxxxxxxxxxxxxxxxxCHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAxxxxxxxxxxxxxxxxxxxxxAHECADSIPELNKMVIGVQALVAQxxxxxxxxxxxxxxxxxxxxxxxxxxxxIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHDQSDKQASQLLERxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDFADLIKYTPNEVKTSKGDDEVMSDIDLRILRSSNSVNRPMSHGSILPRGNGHQHETRKKRDSRSGETENNNILKSSSYENKKRKSDPPRVAATRVMRTAKPVTATIQGPSVHKRINRDQVQGIKERDTKKKIWSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1032 2.2.26 [Sep-21-2011]
O81635987 Kinesin-4 OS=Arabidopsis no no 0.339 0.354 0.512 4e-98
O35231824 Kinesin-like protein KIFC no no 0.345 0.433 0.483 5e-91
Q9BVG8833 Kinesin-like protein KIFC no no 0.341 0.422 0.490 1e-90
P45962598 Kinesin-like protein klp- yes no 0.368 0.635 0.434 2e-82
P28739770 Kinesin-like protein klpA yes no 0.453 0.607 0.382 3e-82
Q9FHN81260 Kinesin-like calmodulin-b no no 0.433 0.354 0.382 5e-82
P46875754 Kinesin-3 OS=Arabidopsis no no 0.356 0.488 0.436 7e-82
P46864745 Kinesin-2 OS=Arabidopsis no no 0.358 0.496 0.434 1e-81
Q07970793 Kinesin-1 OS=Arabidopsis no no 0.442 0.576 0.387 3e-80
F4JGP4790 Kinesin-5 OS=Arabidopsis no no 0.384 0.502 0.410 8e-80
>sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2 Back     alignment and function desciption
 Score =  360 bits (923), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 185/361 (51%), Positives = 247/361 (68%), Gaps = 11/361 (3%)

Query: 366 KELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLT----GSSTRK 421
           ++LYN +Q  +GNIRV+CR RP    + S G + V D D   +G + +      G + +K
Sbjct: 382 RKLYNLVQDLKGNIRVYCRVRPFLPGQESGGLSAVEDID---EGTITIRVPSKYGKAGQK 438

Query: 422 TFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEG----TEQS 477
            F F++VF P+  Q +VF+D  PLV SVLDGYNVCIFAYGQTG+GKTFTM G    TE+S
Sbjct: 439 PFMFNKVFGPSATQEEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTFTMTGPKELTEES 498

Query: 478 RGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGS 537
            GVNYR L  LF ++ +R +T +Y ISV +LE+YNEQ+RDLLA    +K+LEI+ +S   
Sbjct: 499 LGVNYRALADLFLLSNQRKDTTSYEISVQMLEIYNEQVRDLLAQDGQTKRLEIRNNSHNG 558

Query: 538 HHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGEC 597
            +VP      V+S  +   ++  G   RAV S  +N+ SSRSH  + + V+ ++L SG  
Sbjct: 559 INVPEASLVPVSSTDDVIQLMDLGHMNRAVSSTAMNDRSSRSHSCVTVHVQGRDLTSGSI 618

Query: 598 TKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKL 657
               + LVDLAGSER+ +++V GDRLKEAQ+IN+SLSALGDVI SL+ K++H+PYRNSKL
Sbjct: 619 LHGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLSQKTSHVPYRNSKL 678

Query: 658 THLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKM 717
           T LLQDSLGG +KTLMFV ISP    L ET+S+L FA +V  VELG AR   D SE++++
Sbjct: 679 TQLLQDSLGGSAKTLMFVHISPEPDTLGETISTLKFAERVGSVELGAARVNKDNSEVKEL 738

Query: 718 K 718
           K
Sbjct: 739 K 739
Microtubule-binding motor protein.
Arabidopsis thaliana (taxid: 3702)
>sp|O35231|KIFC3_MOUSE Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4 Back     alignment and function description
>sp|Q9BVG8|KIFC3_HUMAN Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4 Back     alignment and function description
>sp|P45962|KLP3_CAEEL Kinesin-like protein klp-3 OS=Caenorhabditis elegans GN=klp-3 PE=1 SV=1 Back     alignment and function description
>sp|P28739|KLPA_EMENI Kinesin-like protein klpA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=klpA PE=2 SV=3 Back     alignment and function description
>sp|Q9FHN8|KCBP_ARATH Kinesin-like calmodulin-binding protein OS=Arabidopsis thaliana GN=KCBP PE=1 SV=1 Back     alignment and function description
>sp|P46875|ATK3_ARATH Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1 Back     alignment and function description
>sp|P46864|ATK2_ARATH Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1 Back     alignment and function description
>sp|Q07970|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1 Back     alignment and function description
>sp|F4JGP4|ATK5_ARATH Kinesin-5 OS=Arabidopsis thaliana GN=ATK5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1032
2555832331074 ATP binding protein, putative [Ricinus c 0.984 0.945 0.736 0.0
3594958501071 PREDICTED: uncharacterized protein LOC10 0.992 0.956 0.716 0.0
296090514979 unnamed protein product [Vitis vinifera] 0.941 0.992 0.715 0.0
3564976791061 PREDICTED: uncharacterized protein LOC10 0.987 0.960 0.662 0.0
3565296971066 PREDICTED: uncharacterized protein LOC10 0.987 0.955 0.659 0.0
3574854191054 Kinesin-4 [Medicago truncatula] gi|35551 0.990 0.969 0.655 0.0
3341843731062 Di-glucose binding protein with Kinesin 0.978 0.951 0.657 0.0
3341843711083 Di-glucose binding protein with Kinesin 0.982 0.936 0.648 0.0
147802316 1233 hypothetical protein VITISV_000434 [Viti 0.943 0.789 0.654 0.0
3594929661014 PREDICTED: uncharacterized protein LOC10 0.969 0.987 0.625 0.0
>gi|255583233|ref|XP_002532381.1| ATP binding protein, putative [Ricinus communis] gi|223527905|gb|EEF29993.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1561 bits (4042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 760/1032 (73%), Positives = 888/1032 (86%), Gaps = 16/1032 (1%)

Query: 9    ESFVDSMLCDSNSRLIPCGFIRSYCTGEFVLFVNAGGEASDEVDCSMKFLGDTYFEGGNV 68
            +S VDSMLCDSNSRLIP GF RS CT E V+F+NAG EA+ E D  +KFLGDT FEGGNV
Sbjct: 48   DSLVDSMLCDSNSRLIPSGFSRSSCTDELVMFINAGSEATIEADLEVKFLGDTNFEGGNV 107

Query: 69   LRTNEHICDAGDYPFIYQSARFGNFCYRFNDIPPGHYYVDLHFAEIINTNGPKGMRVFNV 128
            LRT+E I +AGDY FIYQSARFG+F YRF+++PPG Y+VDLHF EIINTNGP+G+RVF+V
Sbjct: 108  LRTDELINEAGDYQFIYQSARFGSFSYRFDNLPPGSYFVDLHFVEIINTNGPRGLRVFDV 167

Query: 129  FVQEEKVVSDFDIFSIVGANKPLQLVDIGVSVKEEGTVVVRFEGISGSPAVSGICIRRAS 188
            F+QEEKV+S+FDIFS+VGANKPLQLVD  VSVKE+G +++RFEGI GSP VSG+CIR+A 
Sbjct: 168  FIQEEKVLSEFDIFSVVGANKPLQLVDSRVSVKEDGVILIRFEGIIGSPVVSGLCIRKAP 227

Query: 189  KVLSVPQTSHEFLKCNNCAAEIEVPSAQKKLMRIKATEKYEKKIEELNKQFQLKTNECHE 248
            +V SVP  + ++LKCNNCA EIE+ S QKK++R +AT+KYEK+I+EL  + Q K+NECHE
Sbjct: 228  EV-SVPCQTQDYLKCNNCATEIEISSDQKKILRARATDKYEKRIQELITECQHKSNECHE 286

Query: 249  AWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYWAAAVSD 308
            AWMSLTAANEQLEKVRMELDNK FQ+ +LDQTV KQAENL NIT+ YE DK+YWAAAV +
Sbjct: 287  AWMSLTAANEQLEKVRMELDNKTFQSRSLDQTVGKQAENLRNITNMYERDKQYWAAAVEN 346

Query: 309  LQEKVKMMKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKEL 368
            LQ KVKMMK+EHS+LS EAHECADSIPEL+KMV  VQALVAQCED K KYSEEQAKRKEL
Sbjct: 347  LQNKVKMMKEEHSRLSYEAHECADSIPELSKMVTAVQALVAQCEDLKAKYSEEQAKRKEL 406

Query: 369  YNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRV 428
            YNQIQ+ +GNIRVFCRCRPL+K E SAGC TVVDFDAAKDG+LG++TG STRKTFKFDRV
Sbjct: 407  YNQIQEAKGNIRVFCRCRPLSKAESSAGCTTVVDFDAAKDGDLGIITGGSTRKTFKFDRV 466

Query: 429  FTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQL 488
            FTP D QVDVFADASPLV+SVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQL
Sbjct: 467  FTPRDNQVDVFADASPLVLSVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQL 526

Query: 489  FEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANV 548
            F+IAKERSETFTY+ISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEA V
Sbjct: 527  FKIAKERSETFTYSISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEAKV 586

Query: 549  NSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLA 608
            ++++E WNVLQ GS+ARAVGSNNVNEHSSRSHCMLC+MV+AKNL++GECTKSKLWLVDLA
Sbjct: 587  DNLKEVWNVLQAGSNARAVGSNNVNEHSSRSHCMLCVMVKAKNLMNGECTKSKLWLVDLA 646

Query: 609  GSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGD 668
            GSERL +TDVQG+RLKEAQNINRSLSALGDVIY+LATKS+HIPYRNSKLTHLLQDSLGGD
Sbjct: 647  GSERLAKTDVQGERLKEAQNINRSLSALGDVIYALATKSSHIPYRNSKLTHLLQDSLGGD 706

Query: 669  SKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVMLEKARQDS 728
            SKTLMFVQISP+EQD+SETLSSLNFAT+VRG+E GPA++QIDTSELQKMK++L+KARQ+ 
Sbjct: 707  SKTLMFVQISPTEQDVSETLSSLNFATRVRGIEFGPAKRQIDTSELQKMKLLLDKARQEC 766

Query: 729  RSKDESLRKLEENLQNLENRAKYKDQTYKNQQEKVKELEGQVSLKSNLHDQSDKQASQLL 788
            +SK+ESLRKLEENLQNLEN+A+ KDQ YKNQQEK+KELEGQ+  KS LH Q  KQ SQL 
Sbjct: 767  KSKEESLRKLEENLQNLENKARGKDQVYKNQQEKIKELEGQLEFKSTLHSQLGKQISQLS 826

Query: 789  ERLKGREELCSTLQIKVKELENRLRDRQQSESAIFQQKVKDIENKLKEQERESESHSISL 848
            +RLKG+E++C+ L  KVKEL+N+LR+RQQS+S  FQQKVK++ENKLKEQ +ESES+S +L
Sbjct: 827  DRLKGKEDICNGLLQKVKELDNKLRERQQSDSTAFQQKVKELENKLKEQVQESESYSFAL 886

Query: 849  QHKVKELESKLKEQERQHVESLMLRQKIKELEDKLKEQEQQFQCRL---SRDFADLIKYT 905
            QHK+KELE KLKEQE  + E+L+L QKIK+LEDKL EQE+Q QC+      DF   ++ T
Sbjct: 887  QHKIKELERKLKEQE-NNSETLLLHQKIKDLEDKLNEQEKQLQCKQLLDPHDFPGSVRAT 945

Query: 906  PNEVKTSKGDDEVMSDIDLRILRSSNSVNRPMSHGSILPRGNGH------QHETRKKRDS 959
            P E KT   DD  +SDI+  +LR+SNS+ RP S GS L + N +        +TRKKR  
Sbjct: 946  PTEQKTCVRDDGFLSDIESHVLRNSNSMKRPFSQGSTLMKENNNNNNNTLHDQTRKKR-- 1003

Query: 960  RSGETENNNILKSSSYENKKRKSDPPRVAATRVMRTAKPVTATIQGPSVHKRINRDQVQ- 1018
            +SGETE NN +++S ++N+ RKSDPP++      R A+P +   QGP  HKR+ RDQ Q 
Sbjct: 1004 QSGETE-NNFMQASFHDNRVRKSDPPKIGRVMTSRAARPASVA-QGPLTHKRVIRDQGQG 1061

Query: 1019 GIKERDTKKKIW 1030
            G +ERD KKKIW
Sbjct: 1062 GFRERDAKKKIW 1073

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359495850|ref|XP_002266404.2| PREDICTED: uncharacterized protein LOC100249019 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296090514|emb|CBI40845.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356497679|ref|XP_003517687.1| PREDICTED: uncharacterized protein LOC100782704 [Glycine max] Back     alignment and taxonomy information
>gi|356529697|ref|XP_003533425.1| PREDICTED: uncharacterized protein LOC100800016 [Glycine max] Back     alignment and taxonomy information
>gi|357485419|ref|XP_003612997.1| Kinesin-4 [Medicago truncatula] gi|355514332|gb|AES95955.1| Kinesin-4 [Medicago truncatula] Back     alignment and taxonomy information
>gi|334184373|ref|NP_001189577.1| Di-glucose binding protein with Kinesin motor domain [Arabidopsis thaliana] gi|330252234|gb|AEC07328.1| Di-glucose binding protein with Kinesin motor domain [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334184371|ref|NP_179846.3| Di-glucose binding protein with Kinesin motor domain [Arabidopsis thaliana] gi|330252233|gb|AEC07327.1| Di-glucose binding protein with Kinesin motor domain [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147802316|emb|CAN63715.1| hypothetical protein VITISV_000434 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359492966|ref|XP_002283715.2| PREDICTED: uncharacterized protein LOC100250527 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1032
TAIR|locus:2061992983 AT2G47500 [Arabidopsis thalian 0.391 0.410 0.469 2.1e-97
TAIR|locus:20278541025 AT1G73860 [Arabidopsis thalian 0.603 0.607 0.363 2.1e-91
TAIR|locus:2148543987 ATK4 "kinesin 4" [Arabidopsis 0.346 0.362 0.504 3.8e-91
TAIR|locus:20266391071 AT1G63640 [Arabidopsis thalian 0.512 0.493 0.355 3.5e-88
TAIR|locus:20141291140 AT1G18410 [Arabidopsis thalian 0.515 0.466 0.364 6.4e-87
ZFIN|ZDB-GENE-030131-3724937 kifc3 "kinesin family member C 0.479 0.528 0.386 1.8e-85
UNIPROTKB|E2QS65764 KIFC3 "Uncharacterized protein 0.484 0.654 0.391 2.4e-85
UNIPROTKB|F1PZT6933 KIFC3 "Uncharacterized protein 0.484 0.535 0.391 2.4e-85
UNIPROTKB|F6UN94842 KIFC3 "Uncharacterized protein 0.484 0.593 0.391 2.4e-85
UNIPROTKB|B7Z484848 KIFC3 "cDNA FLJ56036, highly s 0.484 0.589 0.391 8e-85
TAIR|locus:2061992 AT2G47500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 913 (326.5 bits), Expect = 2.1e-97, Sum P(3) = 2.1e-97
 Identities = 198/422 (46%), Positives = 283/422 (67%)

Query:   358 YSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGS 417
             Y     + ++LYNQ+Q  +G+IRV+CR RP    + S+  +T+ + +   D  +G+ T S
Sbjct:   379 YHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLPGQ-SSFSSTIGNME---DDTIGINTAS 434

Query:   418 ---STRKTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEG- 473
                 + K+F F++VF P+  Q +VF+D  PL+ SVLDGYNVCIFAYGQTG+GKTFTM G 
Sbjct:   435 RHGKSLKSFTFNKVFGPSATQEEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGP 494

Query:   474 ---TEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEI 530
                TE+S+GVNYR L  LF +A++R +TF Y+I+V ++E+YNEQ+RDLL T  ++K+LEI
Sbjct:   495 RDLTEKSQGVNYRALGDLFLLAEQRKDTFRYDIAVQMIEIYNEQVRDLLVTDGSNKRLEI 554

Query:   531 KQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAK 590
             + SS+    VP      V+S  +  ++++TG   RAVGS  +N+ SSRSH  L + V+ +
Sbjct:   555 RNSSQKGLSVPDASLVPVSSTFDVIDLMKTGHKNRAVGSTALNDRSSRSHSCLTVHVQGR 614

Query:   591 NLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHI 650
             +L SG   +  + LVDLAGSER+ +++V GDRLKEAQ+INRSLSALGDVI SLA K+ H+
Sbjct:   615 DLTSGAVLRGCMHLVDLAGSERVDKSEVTGDRLKEAQHINRSLSALGDVIASLAHKNPHV 674

Query:   651 PYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQID 710
             PYRNSKLT LLQDSLGG +KTLMFV ISP    + ET+S+L FA +V  VELG AR   D
Sbjct:   675 PYRNSKLTQLLQDSLGGQAKTLMFVHISPEADAVGETISTLKFAERVATVELGAARVNND 734

Query:   711 TSELQKMKVMLEK-----ARQDSRSKDESLRKLEENLQNLENRAKYKDQTYKNQQEKVKE 765
             TS+++++K  +       AR+++ S+  ++ K     +  +++AK  +    N     K+
Sbjct:   735 TSDVKELKEQIATLKAALARKEAESQQNNILKTPGGSE--KHKAKTGEVEIHNNNIMTKK 792

Query:   766 LE 767
              E
Sbjct:   793 SE 794
GO:0003777 "microtubule motor activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0007018 "microtubule-based movement" evidence=IEA
TAIR|locus:2027854 AT1G73860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148543 ATK4 "kinesin 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026639 AT1G63640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014129 AT1G18410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3724 kifc3 "kinesin family member C3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2QS65 KIFC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PZT6 KIFC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6UN94 KIFC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z484 KIFC3 "cDNA FLJ56036, highly similar to Homo sapiens kinesin family member C3 (KIFC3), mRNA" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT2G22610
kinesin motor protein-related; kinesin motor protein-related; FUNCTIONS IN- microtubule motor activity, ATP binding; INVOLVED IN- microtubule-based movement; LOCATED IN- microtubule associated complex; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 10 growth stages; CONTAINS InterPro DOMAIN/s- Kinesin, motor region (InterPro-IPR001752); BEST Arabidopsis thaliana protein match is- kinesin motor protein-related (TAIR-AT1G72250.1); Has 61125 Blast hits to 37324 proteins in 1305 species- Archae - 470; Bacteria - 4361; Metazoa - 29529; Fungi - 3969; Plants - 2072; Viruses - 206; Other [...] (1093 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G22600
KH domain-containing protein; KH domain-containing protein; FUNCTIONS IN- RNA binding, nucleic [...] (632 aa)
      • 0.790
AT4G23800
high mobility group (HMG1/2) family protein; high mobility group (HMG1/2) family protein; FUNCT [...] (456 aa)
   •  • 0.757
AT1G53140
dynamin family protein; Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis [...] (817 aa)
   •  • 0.747
AT3G51280
male sterility MS5, putative; male sterility MS5, putative; FUNCTIONS IN- binding; LOCATED IN- [...] (430 aa)
   •  • 0.726
AT5G17160
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (569 aa)
   •    0.637
TOPII
TOPII (TOPOISOMERASE II); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ DNA [...] (1473 aa)
   •  • 0.628
AT4G33400
dem protein-related / defective embryo and meristems protein-related; dem protein-related / def [...] (645 aa)
   •  • 0.626
AT2G28620
kinesin motor protein-related; kinesin motor protein-related; FUNCTIONS IN- microtubule motor a [...] (1076 aa)
   •  ••0.626
AT5G55520
unknown protein; INVOLVED IN- biological_process unknown; EXPRESSED IN- 15 plant structures; EX [...] (805 aa)
   •    0.625
AT3G20150
kinesin motor family protein; kinesin motor family protein; FUNCTIONS IN- microtubule motor act [...] (1114 aa)
   •  ••0.612

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1032
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 0.0
pfam00225326 pfam00225, Kinesin, Kinesin motor domain 1e-140
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 1e-139
cd00106328 cd00106, KISc, Kinesin motor domain 1e-122
cd01369325 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine 1e-105
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 6e-99
cd01371333 cd01371, KISc_KIF3, Kinesin motor domain, kinesins 2e-97
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 2e-91
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 4e-91
cd01365356 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K 3e-86
cd01374321 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E 2e-79
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 8e-78
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 2e-77
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 1e-69
cd01376319 cd01376, KISc_KID_like, Kinesin motor domain, KIF2 3e-69
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 9e-69
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 2e-60
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 2e-56
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 5e-40
pfam11721164 pfam11721, Malectin, Di-glucose binding within end 3e-27
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 2e-15
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 4e-09
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 1e-08
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 2e-08
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 6e-08
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 1e-07
PRK03918 880 PRK03918, PRK03918, chromosome segregation protein 1e-07
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 6e-07
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 6e-07
TIGR021691164 TIGR02169, SMC_prok_A, chromosome segregation prot 1e-06
COG0419908 COG0419, SbcC, ATPase involved in DNA repair [DNA 1e-06
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 2e-06
PRK03918 880 PRK03918, PRK03918, chromosome segregation protein 3e-06
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 4e-06
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 7e-06
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 1e-05
PRK03918880 PRK03918, PRK03918, chromosome segregation protein 1e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 1e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 1e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 1e-05
pfam05557 722 pfam05557, MAD, Mitotic checkpoint protein 1e-05
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 2e-05
pfam12819335 pfam12819, Malectin_like, Carbohydrate-binding pro 2e-05
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 3e-05
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 4e-05
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 6e-05
COG0419908 COG0419, SbcC, ATPase involved in DNA repair [DNA 7e-05
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 7e-05
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 8e-05
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 1e-04
COG4372499 COG4372, COG4372, Uncharacterized protein conserve 1e-04
pfam05667536 pfam05667, DUF812, Protein of unknown function (DU 1e-04
PLN03150623 PLN03150, PLN03150, hypothetical protein; Provisio 1e-04
PRK03918880 PRK03918, PRK03918, chromosome segregation protein 2e-04
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 2e-04
pfam01576859 pfam01576, Myosin_tail_1, Myosin tail 2e-04
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 3e-04
pfam01576 859 pfam01576, Myosin_tail_1, Myosin tail 3e-04
COG4487438 COG4487, COG4487, Uncharacterized protein conserve 3e-04
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 4e-04
PRK04863 1486 PRK04863, mukB, cell division protein MukB; Provis 5e-04
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 6e-04
TIGR03319 514 TIGR03319, RNase_Y, ribonuclease Y 6e-04
pfam12128 1198 pfam12128, DUF3584, Protein of unknown function (D 8e-04
PRK03918 880 PRK03918, PRK03918, chromosome segregation protein 0.001
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 0.001
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 0.001
pfam13851201 pfam13851, GAS, Growth-arrest specific micro-tubul 0.001
pfam05622 713 pfam05622, HOOK, HOOK protein 0.001
pfam00261237 pfam00261, Tropomyosin, Tropomyosin 0.001
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.002
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.002
pfam14073178 pfam14073, Cep57_CLD, Centrosome localisation doma 0.002
TIGR01069771 TIGR01069, mutS2, MutS2 family protein 0.002
pfam09726680 pfam09726, Macoilin, Transmembrane protein 0.002
COG5019373 COG5019, CDC3, Septin family protein [Cell divisio 0.002
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.003
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.003
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.003
PRK03918 880 PRK03918, PRK03918, chromosome segregation protein 0.004
pfam02463 1162 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.004
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information 
 Score =  533 bits (1376), Expect = 0.0
 Identities = 191/330 (57%), Positives = 237/330 (71%), Gaps = 3/330 (0%)

Query: 376 RGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPNDGQ 435
           +GNIRVFCR RPL   E +   + V+ F     G + +  G+  +K+F FDRVF P+  Q
Sbjct: 1   KGNIRVFCRVRPLLPSESTEYSS-VISFPDEDGGTIELSKGTGKKKSFSFDRVFDPDASQ 59

Query: 436 VDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKER 495
            DVF + SPLV S LDGYNVCIFAYGQTG+GKT+TMEG  ++ G+  R LEQLF  A+E 
Sbjct: 60  EDVFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMEGPPENPGIIPRALEQLFNTAEEL 119

Query: 496 SE-TFTYNISVSVLEVYNEQIRDLLATSP-TSKKLEIKQSSEGSHHVPGIVEANVNSIRE 553
            E  ++Y I+ S+LE+YNE IRDLLAT P   KKLEIK  S+G  +V  + E  V+S  E
Sbjct: 120 KEKGWSYTITASMLEIYNETIRDLLATKPAPKKKLEIKHDSKGETYVTNLTEVPVSSPEE 179

Query: 554 AWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERL 613
              +L  GS  R+V S N+NEHSSRSH +  + +R  NL +GE T+ KL LVDLAGSERL
Sbjct: 180 VTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQTGEQTRGKLNLVDLAGSERL 239

Query: 614 TRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLM 673
            ++   GDRLKEAQ IN+SLSALGDVI +L +K +H+PYRNSKLT+LLQDSLGG+SKTLM
Sbjct: 240 KKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSLGGNSKTLM 299

Query: 674 FVQISPSEQDLSETLSSLNFATQVRGVELG 703
           FV ISP E +LSETL SL FA++VR VELG
Sbjct: 300 FVNISPLESNLSETLCSLRFASRVRSVELG 329

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329
>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] Back     alignment and domain information
>gnl|CDD|218681 pfam05667, DUF812, Protein of unknown function (DUF812) Back     alignment and domain information
>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail Back     alignment and domain information
>gnl|CDD|226889 COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|235316 PRK04863, mukB, cell division protein MukB; Provisional Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y Back     alignment and domain information
>gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|222417 pfam13851, GAS, Growth-arrest specific micro-tubule binding Back     alignment and domain information
>gnl|CDD|218661 pfam05622, HOOK, HOOK protein Back     alignment and domain information
>gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|206243 pfam14073, Cep57_CLD, Centrosome localisation domain of Cep57 Back     alignment and domain information
>gnl|CDD|130141 TIGR01069, mutS2, MutS2 family protein Back     alignment and domain information
>gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein Back     alignment and domain information
>gnl|CDD|227352 COG5019, CDC3, Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1032
KOG0239670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 100.0
KOG0243 1041 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0240607 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] 100.0
KOG4280574 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 100.0
PLN03188 1320 kinesin-12 family protein; Provisional 100.0
cd01370338 KISc_KIP3_like Kinesin motor domain, KIP3-like sub 100.0
cd01373337 KISc_KLP2_like Kinesin motor domain, KLP2-like sub 100.0
cd01368345 KISc_KIF23_like Kinesin motor domain, KIF23-like s 100.0
KOG0242675 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01365356 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p 100.0
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01367322 KISc_KIF2_like Kinesin motor domain, KIF2-like gro 100.0
cd01364352 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind 100.0
cd01369325 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy 100.0
cd01366329 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ 100.0
KOG0247809 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01371333 KISc_KIF3 Kinesin motor domain, kinesins II or KIF 100.0
cd01376319 KISc_KID_like Kinesin motor domain, KIF22/Kid-like 100.0
cd01372341 KISc_KIF4 Kinesin motor domain, KIF4-like subfamil 100.0
cd01374321 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like 100.0
cd01375334 KISc_KIF9_like Kinesin motor domain, KIF9-like sub 100.0
smart00129335 KISc Kinesin motor, catalytic domain. ATPase. Micr 100.0
cd00106328 KISc Kinesin motor domain. This catalytic (head) d 100.0
PF00225335 Kinesin: Kinesin motor domain; InterPro: IPR001752 100.0
KOG0244 913 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0246676 consensus Kinesin-like protein [Cytoskeleton] 100.0
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 100.0
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.96
PLN03150623 hypothetical protein; Provisional 99.79
PF12819347 Malectin_like: Carbohydrate-binding protein of the 99.61
PLN03150623 hypothetical protein; Provisional 99.54
PF12819347 Malectin_like: Carbohydrate-binding protein of the 99.32
KOG3593355 consensus Predicted receptor-like serine/threonine 99.29
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 99.24
COG11961163 Smc Chromosome segregation ATPases [Cell division 97.98
COG11961163 Smc Chromosome segregation ATPases [Cell division 97.55
KOG02501074 consensus DNA repair protein RAD18 (SMC family pro 97.54
KOG0996 1293 consensus Structural maintenance of chromosome pro 97.46
PRK11637428 AmiB activator; Provisional 96.92
PRK11637428 AmiB activator; Provisional 96.89
TIGR021691164 SMC_prok_A chromosome segregation protein SMC, pri 96.7
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 96.55
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 96.48
KOG09961293 consensus Structural maintenance of chromosome pro 96.46
PF07926132 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: 96.42
KOG4673 961 consensus Transcription factor TMF, TATA element m 96.4
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 96.39
KOG4673 961 consensus Transcription factor TMF, TATA element m 96.25
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 96.23
TIGR02169 1164 SMC_prok_A chromosome segregation protein SMC, pri 96.21
PRK02224880 chromosome segregation protein; Provisional 96.0
PF10481307 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 95.98
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 95.89
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 95.89
TIGR02168 1179 SMC_prok_B chromosome segregation protein SMC, com 95.74
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 95.69
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 95.69
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 95.68
KOG0977546 consensus Nuclear envelope protein lamin, intermed 95.63
KOG1853333 consensus LIS1-interacting protein NUDE [Cytoskele 95.52
KOG0971 1243 consensus Microtubule-associated protein dynactin 95.46
PF05667594 DUF812: Protein of unknown function (DUF812); Inte 95.37
PF15619194 Lebercilin: Ciliary protein causing Leber congenit 95.15
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 95.11
TIGR02168 1179 SMC_prok_B chromosome segregation protein SMC, com 94.96
COG4942420 Membrane-bound metallopeptidase [Cell division and 94.88
KOG0239670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 94.65
KOG0933 1174 consensus Structural maintenance of chromosome pro 94.6
PF14662193 CCDC155: Coiled-coil region of CCDC155 94.59
PF10174 775 Cast: RIM-binding protein of the cytomatrix active 94.57
KOG0980980 consensus Actin-binding protein SLA2/Huntingtin-in 94.53
KOG0971 1243 consensus Microtubule-associated protein dynactin 94.44
PF10473140 CENP-F_leu_zip: Leucine-rich repeats of kinetochor 94.41
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 94.33
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 94.19
PRK03918 880 chromosome segregation protein; Provisional 94.04
PF09730 717 BicD: Microtubule-associated protein Bicaudal-D; I 94.02
PHA02562562 46 endonuclease subunit; Provisional 93.95
KOG09941758 consensus Extracellular matrix glycoprotein Lamini 93.83
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 93.73
PRK09039343 hypothetical protein; Validated 93.69
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 93.68
PF00038312 Filament: Intermediate filament protein; InterPro: 93.68
PRK09039343 hypothetical protein; Validated 93.55
PF15070 617 GOLGA2L5: Putative golgin subfamily A member 2-lik 93.55
KOG3859406 consensus Septins (P-loop GTPases) [Cell cycle con 93.5
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 93.47
KOG1937521 consensus Uncharacterized conserved protein [Funct 93.25
PF09730717 BicD: Microtubule-associated protein Bicaudal-D; I 93.03
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 93.02
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 92.97
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 92.88
KOG0995581 consensus Centromere-associated protein HEC1 [Cell 92.8
PHA02562562 46 endonuclease subunit; Provisional 92.72
PRK01156895 chromosome segregation protein; Provisional 92.71
COG3883265 Uncharacterized protein conserved in bacteria [Fun 92.62
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 92.58
PRK04863 1486 mukB cell division protein MukB; Provisional 92.58
PF05667594 DUF812: Protein of unknown function (DUF812); Inte 92.57
PF10174 775 Cast: RIM-binding protein of the cytomatrix active 92.47
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 92.42
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 92.41
PF13851201 GAS: Growth-arrest specific micro-tubule binding 92.35
PF00038312 Filament: Intermediate filament protein; InterPro: 92.35
COG0556663 UvrB Helicase subunit of the DNA excision repair c 92.29
KOG0977546 consensus Nuclear envelope protein lamin, intermed 92.13
KOG4593716 consensus Mitotic checkpoint protein MAD1 [Cell cy 92.07
PRK04863 1486 mukB cell division protein MukB; Provisional 92.0
TIGR01242364 26Sp45 26S proteasome subunit P45 family. Many pro 91.95
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 91.72
PF13851201 GAS: Growth-arrest specific micro-tubule binding 91.51
PF15619194 Lebercilin: Ciliary protein causing Leber congenit 91.36
PRK04778569 septation ring formation regulator EzrA; Provision 91.29
COG0419908 SbcC ATPase involved in DNA repair [DNA replicatio 91.12
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 91.09
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 90.96
COG1340294 Uncharacterized archaeal coiled-coil protein [Func 90.86
smart00787312 Spc7 Spc7 kinetochore protein. This domain is foun 90.8
PF15066527 CAGE1: Cancer-associated gene protein 1 family 90.73
KOG0995581 consensus Centromere-associated protein HEC1 [Cell 90.35
PRK10869553 recombination and repair protein; Provisional 90.08
KOG09941758 consensus Extracellular matrix glycoprotein Lamini 90.05
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 89.98
COG2805353 PilT Tfp pilus assembly protein, pilus retraction 89.97
PF04156191 IncA: IncA protein; InterPro: IPR007285 Chlamydia 89.81
PF04849306 HAP1_N: HAP1 N-terminal conserved region; InterPro 89.72
TIGR00634563 recN DNA repair protein RecN. All proteins in this 89.51
KOG0612 1317 consensus Rho-associated, coiled-coil containing p 89.37
PF10168717 Nup88: Nuclear pore component; InterPro: IPR019321 89.19
KOG0980 980 consensus Actin-binding protein SLA2/Huntingtin-in 89.03
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 88.86
TIGR03007498 pepcterm_ChnLen polysaccharide chain length determ 88.66
PRK06893229 DNA replication initiation factor; Validated 88.6
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 88.55
KOG4807593 consensus F-actin binding protein, regulates actin 88.49
KOG1899 861 consensus LAR transmembrane tyrosine phosphatase-i 88.38
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 88.33
COG4942420 Membrane-bound metallopeptidase [Cell division and 88.3
PF12325120 TMF_TATA_bd: TATA element modulatory factor 1 TATA 88.19
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 88.04
PF10481307 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 88.02
PRK12377248 putative replication protein; Provisional 87.82
KOG0612 1317 consensus Rho-associated, coiled-coil containing p 87.7
PF06785401 UPF0242: Uncharacterised protein family (UPF0242); 87.68
PRK06835329 DNA replication protein DnaC; Validated 87.6
smart00787312 Spc7 Spc7 kinetochore protein. This domain is foun 87.46
KOG0243 1041 consensus Kinesin-like protein [Cytoskeleton] 87.4
PRK04778569 septation ring formation regulator EzrA; Provision 87.39
KOG1853333 consensus LIS1-interacting protein NUDE [Cytoskele 87.29
COG4372499 Uncharacterized protein conserved in bacteria with 87.21
PF06785401 UPF0242: Uncharacterised protein family (UPF0242); 87.11
KOG1003205 consensus Actin filament-coating protein tropomyos 87.01
PRK03992389 proteasome-activating nucleotidase; Provisional 87.0
PF07926132 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: 86.9
PRK12704 520 phosphodiesterase; Provisional 86.59
PRK14086617 dnaA chromosomal replication initiation protein; P 86.57
PTZ00454398 26S protease regulatory subunit 6B-like protein; P 86.57
PF15070 617 GOLGA2L5: Putative golgin subfamily A member 2-lik 86.55
PF15254 861 CCDC14: Coiled-coil domain-containing protein 14 86.53
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 86.46
PRK08084235 DNA replication initiation factor; Provisional 86.38
KOG0979 1072 consensus Structural maintenance of chromosome pro 85.8
PRK06620214 hypothetical protein; Validated 85.79
KOG0964 1200 consensus Structural maintenance of chromosome pro 85.76
PF12325120 TMF_TATA_bd: TATA element modulatory factor 1 TATA 85.66
PF08614194 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR 85.57
PF10186302 Atg14: UV radiation resistance protein and autopha 85.3
TIGR03319 514 YmdA_YtgF conserved hypothetical protein YmdA/YtgF 84.95
COG5185622 HEC1 Protein involved in chromosome segregation, i 84.93
KOG4360596 consensus Uncharacterized coiled coil protein [Fun 84.91
PRK08116268 hypothetical protein; Validated 84.81
KOG09331174 consensus Structural maintenance of chromosome pro 84.77
PF10473140 CENP-F_leu_zip: Leucine-rich repeats of kinetochor 84.76
PRK14088440 dnaA chromosomal replication initiation protein; P 84.48
PRK07952244 DNA replication protein DnaC; Validated 84.45
PF09755310 DUF2046: Uncharacterized conserved protein H4 (DUF 84.42
PF15397258 DUF4618: Domain of unknown function (DUF4618) 84.33
PRK05642234 DNA replication initiation factor; Validated 84.29
COG4372499 Uncharacterized protein conserved in bacteria with 84.27
TIGR00362405 DnaA chromosomal replication initiator protein Dna 83.95
PRK00149450 dnaA chromosomal replication initiation protein; R 83.65
KOG1850391 consensus Myosin-like coiled-coil protein [Cytoske 83.43
PF04949159 Transcrip_act: Transcriptional activator; InterPro 83.36
PF10212518 TTKRSYEDQ: Predicted coiled-coil domain-containing 83.24
PF05701522 WEMBL: Weak chloroplast movement under blue light; 83.2
PF10168717 Nup88: Nuclear pore component; InterPro: IPR019321 83.09
PRK02224880 chromosome segregation protein; Provisional 83.06
PF10186302 Atg14: UV radiation resistance protein and autopha 82.75
PRK14087450 dnaA chromosomal replication initiation protein; P 82.5
COG0593408 DnaA ATPase involved in DNA replication initiation 82.38
PRK01156 895 chromosome segregation protein; Provisional 82.24
PRK00106 535 hypothetical protein; Provisional 82.2
KOG0964 1200 consensus Structural maintenance of chromosome pro 82.09
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 81.88
KOG4603201 consensus TBP-1 interacting protein [Signal transd 81.69
TIGR01005 754 eps_transp_fam exopolysaccharide transport protein 81.48
PRK09841726 cryptic autophosphorylating protein tyrosine kinas 81.43
PF15450531 DUF4631: Domain of unknown function (DUF4631) 81.4
KOG4593 716 consensus Mitotic checkpoint protein MAD1 [Cell cy 81.38
KOG0727408 consensus 26S proteasome regulatory complex, ATPas 81.38
KOG0978698 consensus E3 ubiquitin ligase involved in syntaxin 81.35
PF10498359 IFT57: Intra-flagellar transport protein 57 ; Inte 81.2
PRK08903227 DnaA regulatory inactivator Hda; Validated 81.17
KOG4074383 consensus Leucine zipper nuclear factor [Function 81.09
TIGR03017444 EpsF chain length determinant protein EpsF. Sequen 80.68
PF05911769 DUF869: Plant protein of unknown function (DUF869) 80.68
PF10146230 zf-C4H2: Zinc finger-containing protein ; InterPro 80.35
TIGR02928365 orc1/cdc6 family replication initiation protein. M 80.16
KOG4809654 consensus Rab6 GTPase-interacting protein involved 80.15
PRK10884206 SH3 domain-containing protein; Provisional 80.03
PRK09087226 hypothetical protein; Validated 80.02
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=2.5e-94  Score=863.69  Aligned_cols=485  Identities=44%  Similarity=0.599  Sum_probs=403.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhchhHHHHHHHHHHHHHhhhhhhhHHHH
Q 001679          223 KATEKYEKKIEELNKQFQLKTNECHEAWMSLTAANEQLEKVRMELDNKAFQTLTLDQTVEKQAENLINITSRYECDKKYW  302 (1032)
Q Consensus       223 k~~~~~~~~ie~l~~e~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  302 (1032)
                      |...+++.++..+..+++...+.+.+++..++....+-..+...+.        .....+.....+.       ......
T Consensus       175 k~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~~~~~~~~l~~~~~--------~~~~~~~~~~~l~-------~~~~~~  239 (670)
T KOG0239|consen  175 KESLKLESDLGDLVTELEHVTNSISELESVLKSAQEERRVLADSLG--------NYADLRRNIKPLE-------GLESTI  239 (670)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh--------hhhhHHHhhhhhh-------hhhhHH
Confidence            4467777788888888877777777777776663333333333222        0111222222222       222233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCEEE
Q 001679          303 AAAVSDLQEKVKMMKKEHSQLSREAHECADSIPELNKMVI-GVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRV  381 (1032)
Q Consensus       303 ~~~~~~l~~~~~~~~~e~~~l~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~e~~~Rr~l~n~~~elkgnIrV  381 (1032)
                      ...+..|+.++..++.++..+..+...+...+++.-.... .+..+......+.+++ +|+.+||+|||+|+||||||||
T Consensus       240 ~~~i~~l~~~l~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~-~e~~~r~kL~N~i~eLkGnIRV  318 (670)
T KOG0239|consen  240 KKKIQALQQELEELKAELKELNDQVSLLTREVQEALKESNTLQSDLESLEENLVEKK-KEKEERRKLHNEILELKGNIRV  318 (670)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCceE
Confidence            3346666666666666666666666665555444433222 2555666667788888 9999999999999999999999


Q ss_pred             EEEecCCCcccccCCCceEEEecCCCCCceeEEeCCcCc----eeeecceEECCCCCchhhhhcchHHHHHHhcCcceEE
Q 001679          382 FCRCRPLNKVEISAGCATVVDFDAAKDGELGVLTGSSTR----KTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCI  457 (1032)
Q Consensus       382 ~~RvRP~~~~E~~~~~~~vv~~~~~~~~~~~~~~~~~~~----~~F~FD~VF~~~~tQ~~vf~~v~plV~~~l~G~N~~I  457 (1032)
                      ||||||+.+.+....+..++.++..  +++.+..+....    +.|.||+||+|.++|.+||.++.|+|++||||||+||
T Consensus       319 ~CRvRP~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~f~fdkVf~p~~sQ~~VF~e~~~lv~S~lDGYnVCI  396 (670)
T KOG0239|consen  319 FCRVRPLLPSEKQRLQSKVIDTEEQ--GEVQVDSPDKGDKLEPQSFKFDKVFGPLASQDDVFEEVSPLVQSALDGYNVCI  396 (670)
T ss_pred             EEEecCCCccccccccccccccCCc--ceeEeecCCCCCCCccccceeeeecCCcccHHHHHHHHHHHHHHHhcCcceeE
Confidence            9999999998877655556655532  344443332222    3599999999999999999999999999999999999


Q ss_pred             EeecccCCCcceEeec-cCCCCchhHhHHHHHHHHHHhcCCCceeeeeeeEEEEEcCceeeccCCCCCCccccccccCCC
Q 001679          458 FAYGQTGTGKTFTMEG-TEQSRGVNYRTLEQLFEIAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEG  536 (1032)
Q Consensus       458 faYGqTGSGKTyTm~G-~~~~~GIipral~~LF~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~~~~~~  536 (1032)
                      ||||||||||||||.| +++++|||||++.+||..+.....+|.|.+.+||+|||||.|+|||.+.+...++.|+++.++
T Consensus       397 FAYGQTGSGKTyTM~G~~~~~~Giipral~~lF~~~~~~~~g~~y~~~~s~~EIYNe~i~DlL~~~~~~~k~~I~~~~~~  476 (670)
T KOG0239|consen  397 FAYGQTGSGKTYTMSGPTPEDPGIIPRALEKLFRTITSLKSGWKYDKTVSMLEIYNEAIRDLLSDESYVGKLEIVDDAEG  476 (670)
T ss_pred             EEecccCCCccccccCCCcccCCccHHHHHHHHHHHHhhccCceEEeeeehhHHHHHHHHHhccccccccceeEEEcCCC
Confidence            9999999999999999 689999999999999999999888999999999999999999999997655678999999999


Q ss_pred             ceecCCcEEEEeCChHHHHHHHHhhhcccccccCCCCCCCCCCceEEEEEEEEeecCCCceeeeeeeEeecCCCcccCCC
Q 001679          537 SHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRT  616 (1032)
Q Consensus       537 ~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~s  616 (1032)
                      ..+|++++.+.|.+.++++.+++.|..+|++++|.+|++|||||+||+|+|.+.+..++..+.|.|+|||||||||++++
T Consensus       477 ~~~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~v~v~g~~~~t~~~~~g~l~LVDLAGSER~~~s  556 (670)
T KOG0239|consen  477 NLMVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFRVRIRGINELTGIRVTGVLNLVDLAGSERVSKS  556 (670)
T ss_pred             ceecccceEEecCCHHHHHHHHHHhhccccccccccchhhhccceEEEEEEeccccCcccccccceeEeecccCcccCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhHHHHHHHHHhHHhhHHHHHHHhcCCCcccCCCCcchhhhccccCCCcceEEEEEeCCCCcChHhHHHHHHHHHH
Q 001679          617 DVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQ  696 (1032)
Q Consensus       617 ~~~g~rlkE~~~INkSL~aLg~VI~aL~~~~~hiPyRdSKLT~LLqdsLgGnskt~mI~~ISP~~~~~~ETl~TL~fA~r  696 (1032)
                      +++|+|++|+++||+||++||+||.||+.+..||||||||||+|||++|||++||+|||+|||...++.||+++|+||+|
T Consensus       557 ~~tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPyRNSKLT~lLq~sLGG~sKTLmfv~isP~~~~~~Etl~sL~FA~r  636 (670)
T KOG0239|consen  557 GVTGERLKEAQNINKSLSALGDVISALASKRSHIPYRNSKLTQLLQDSLGGDSKTLMFVNISPAAAALFETLCSLRFATR  636 (670)
T ss_pred             CCchhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcccccchHHHhHhhhCCccceeeEEEeCccHHHHhhhhhccchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccccccccccChHHHHHHHHHHHHHH
Q 001679          697 VRGVELGPARKQIDTSELQKMKVMLEKAR  725 (1032)
Q Consensus       697 ~~~i~~~p~~~~~~~~el~~lk~~l~~~~  725 (1032)
                      |+.+++++++.+....+...++.....++
T Consensus       637 v~~~~lG~a~~~~~~~~~~~~~~~~~~~~  665 (670)
T KOG0239|consen  637 VRSVELGSARKQVSTSDDVSLKRFGQLEK  665 (670)
T ss_pred             hhceecccccccccccchhhhhhhhhhhh
Confidence            99999999999888776666665554443

>KOG0243 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] Back     alignment and domain information
>KOG4280 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PLN03188 kinesin-12 family protein; Provisional Back     alignment and domain information
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>KOG0242 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group Back     alignment and domain information
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>KOG0247 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>smart00129 KISc Kinesin motor, catalytic domain Back     alignment and domain information
>cd00106 KISc Kinesin motor domain Back     alignment and domain information
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport Back     alignment and domain information
>KOG0244 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0246 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) Back     alignment and domain information
>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF14662 CCDC155: Coiled-coil region of CCDC155 Back     alignment and domain information
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] Back     alignment and domain information
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>KOG3859 consensus Septins (P-loop GTPases) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>KOG1937 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>TIGR01242 26Sp45 26S proteasome subunit P45 family Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] Back     alignment and domain information
>smart00787 Spc7 Spc7 kinetochore protein Back     alignment and domain information
>PF15066 CAGE1: Cancer-associated gene protein 1 family Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK10869 recombination and repair protein; Provisional Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion Back     alignment and domain information
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues Back     alignment and domain information
>TIGR00634 recN DNA repair protein RecN Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs Back     alignment and domain information
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton] Back     alignment and domain information
>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function Back     alignment and domain information
>PRK06835 DNA replication protein DnaC; Validated Back     alignment and domain information
>smart00787 Spc7 Spc7 kinetochore protein Back     alignment and domain information
>KOG0243 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] Back     alignment and domain information
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] Back     alignment and domain information
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function Back     alignment and domain information
>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] Back     alignment and domain information
>PRK03992 proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) Back     alignment and domain information
>PRK12704 phosphodiesterase; Provisional Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>PF15254 CCDC14: Coiled-coil domain-containing protein 14 Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] Back     alignment and domain information
>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking Back     alignment and domain information
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF Back     alignment and domain information
>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain Back     alignment and domain information
>PF15397 DUF4618: Domain of unknown function (DUF4618) Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>KOG1850 consensus Myosin-like coiled-coil protein [Cytoskeleton] Back     alignment and domain information
>PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae [] Back     alignment and domain information
>PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif Back     alignment and domain information
>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function Back     alignment and domain information
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>PRK00106 hypothetical protein; Provisional Back     alignment and domain information
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>KOG4603 consensus TBP-1 interacting protein [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family Back     alignment and domain information
>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional Back     alignment and domain information
>PF15450 DUF4631: Domain of unknown function (DUF4631) Back     alignment and domain information
>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0727 consensus 26S proteasome regulatory complex, ATPase RPT3 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>KOG4074 consensus Leucine zipper nuclear factor [Function unknown] Back     alignment and domain information
>TIGR03017 EpsF chain length determinant protein EpsF Back     alignment and domain information
>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants Back     alignment and domain information
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1032
2h58_A330 Crystal Structure Of The Kifc3 Motor Domain In Comp 7e-86
3h4s_A386 Structure Of The Complex Of A Mitotic Kinesin With 2e-79
1sdm_A369 Crystal Structure Of Kinesin-Like Calmodulin Bindin 2e-74
4etp_A403 C-Terminal Motor And Motor Homology Domain Of Kar3v 3e-70
2ncd_A420 Ncd (Non-Claret Disjunctional) Dimer From D. Melano 1e-68
1f9t_A358 Crystal Structures Of Kinesin Mutants Reveal A Sign 4e-68
1cz7_A406 The Crystal Structure Of A Minus-End Directed Micro 8e-68
3b6u_A372 Crystal Structure Of The Motor Domain Of Human Kine 1e-67
1goj_A355 Structure Of A Fast Kinesin: Implications For Atpas 1e-67
1n6m_A409 Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY 4e-67
3u06_A412 Crystal Structure Of The Kinesin-14 Ncdg347d Length 6e-67
3l1c_A383 Kinesin-14 Protein Ncd, T436s Mutant Length = 383 1e-66
4gkr_A371 Structure Of The C-Terminal Motor Domain Of Kar3 Fr 2e-66
2rep_A376 Crystal Structure Of The Motor Domain Of Human Kine 6e-66
3kar_A346 The Motor Domain Of Kinesin-Like Protein Kar3, A Sa 3e-64
1f9w_A347 Crystal Structures Of Mutants Reveal A Signalling P 4e-64
1f9u_A347 Crystal Structures Of Mutants Reveal A Signalling P 4e-64
1f9v_A347 Crystal Structures Of Mutants Reveal A Signalling P 6e-64
3t0q_A349 Motor Domain Structure Of The Kar3-Like Kinesin Fro 4e-63
1bg2_A325 Human Ubiquitous Kinesin Motor Domain Length = 325 5e-61
1mkj_A349 Human Kinesin Motor Domain With Docked Neck Linker 5e-61
4atx_C340 Rigor Kinesin Motor Domain With An Ordered Neck-Lin 1e-60
4h1g_A715 Structure Of Candida Albicans Kar3 Motor Domain Fus 2e-60
2y5w_A365 Crystal Structure Of Drosophila Melanogaster Kinesi 7e-60
1ii6_A368 Crystal Structure Of The Mitotic Kinesin Eg5 In Com 9e-60
3hqd_A369 Human Kinesin Eg5 Motor Domain In Complex With Ampp 9e-60
1q0b_A367 Crystal Structure Of The Motor Protein Ksp In Compl 9e-60
1x88_A359 Human Eg5 Motor Domain Bound To Mg-Adp And Monastro 1e-59
4a1z_A368 Eg5-1 Length = 368 1e-59
4a28_A368 Eg5-2 Length = 368 1e-59
4ap0_A370 The Mitotic Kinesin Eg5 In Complex With Mg-Adp And 1e-59
4aqv_C373 Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma 2e-59
3zcw_A348 Eg5 - New Allosteric Binding Site Length = 348 3e-59
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 2e-58
2wbe_C373 Kinesin-5-Tubulin Complex With Amppnp Length = 373 3e-57
3gbj_A354 Crystal Structure Of The Motor Domain Of Kinesin Ki 5e-57
2vvg_A350 Crystal Structure Of The G.Intestinalis Kinesin 2 G 2e-55
4a14_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 1e-52
2owm_A443 Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 1e-50
3lre_A355 Crystal Structure Analysis Of Human Kinesin-8 Motor 2e-50
2xt3_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 9e-50
1t5c_A349 Crystal Structure Of The Motor Domain Of Human Kine 3e-49
1ia0_K394 Kif1a Head-Microtubule Complex Structure In Atp-For 5e-48
1i6i_A366 Crystal Structure Of The Kif1a Motor Domain Complex 7e-48
1i5s_A367 Crystal Structure Of The Kif1a Motor Domain Complex 7e-48
3nwn_A359 Crystal Structure Of The Human Kif9 Motor Domain In 1e-47
1vfv_A366 Crystal Structure Of The Kif1a Motor Domain Complex 2e-47
3bfn_A388 Crystal Structure Of The Motor Domain Of Human Kine 4e-46
2kin_A238 Kinesin (Monomeric) From Rattus Norvegicus Length = 6e-37
3dc4_A344 Crystal Structure Of The Drosophila Kinesin Family 4e-35
3pxn_A344 Crystal Structure Of The Drosophila Kinesin Family 4e-35
1v8j_A410 The Crystal Structure Of The Minimal Functional Dom 3e-33
2heh_A387 Crystal Structure Of The Kif2c Motor Domain (Casp T 5e-33
2gry_A420 Crystal Structure Of The Human Kif2 Motor Domain In 1e-32
3edl_D331 Kinesin13-Microtubule Ring Complex Length = 331 2e-32
1ry6_A360 Crystal Structure Of Internal Kinesin Motor Domain 1e-29
2kin_B100 Kinesin (Monomeric) From Rattus Norvegicus Length = 1e-12
3kin_B117 Kinesin (Dimeric) From Rattus Norvegicus Length = 1 1e-11
>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 Back     alignment and structure 
Iteration: 1

 Score =  315 bits (807), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 167/331 (50%), Positives = 223/331 (67%), Gaps = 5/331 (1%)
Query: 375 TRGNIRVFCRCRPLNKVEISAGCAT-VVDFDAAKDGELGVLTGSSTRKTFKFDRVFTPND 433
           ++GNIRV  R RP+ K +     AT  V FDA  D  + +L       +F+ D+VF+P  
Sbjct: 2   SKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLH-KGKPVSFELDKVFSPQA 60
Query: 434 GQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAK 493
            Q DVF +   LV S +DG+NVCIFAYGQTG GKT+TMEGT ++ G+N R L+ LF   +
Sbjct: 61  SQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQ 120
Query: 494 ERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSH--HVPGIVEANVNSI 551
           E++  + Y I+VS  E+YNE +RDLL   P  +KLEI+   +GS   +VPG+ E  V S+
Sbjct: 121 EKASDWEYTITVSAAEIYNEVLRDLLGKEP-QEKLEIRLCPDGSGQLYVPGLTEFQVQSV 179
Query: 552 REAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSE 611
            +   V + G + R     N+NEHSSRSH +L + VR  +  +G  T  KL LVDLAGSE
Sbjct: 180 DDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSE 239
Query: 612 RLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKT 671
           R+ ++  +G RL+EAQ+IN+SLSALGDVI +L ++  H+P+RNSKLT+LLQDSL GDSKT
Sbjct: 240 RVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKT 299
Query: 672 LMFVQISPSEQDLSETLSSLNFATQVRGVEL 702
           LM VQ+SP E++ SETL SL FA +VR VEL
Sbjct: 300 LMVVQVSPVEKNTSETLYSLKFAERVRSVEL 330
>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 Back     alignment and structure
>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 Back     alignment and structure
>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 Back     alignment and structure
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 Back     alignment and structure
>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 Back     alignment and structure
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 Back     alignment and structure
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 Back     alignment and structure
>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 Back     alignment and structure
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 Back     alignment and structure
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 Back     alignment and structure
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 Back     alignment and structure
>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 Back     alignment and structure
>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 Back     alignment and structure
>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 Back     alignment and structure
>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 Back     alignment and structure
>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 Back     alignment and structure
>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 Back     alignment and structure
>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 Back     alignment and structure
>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 Back     alignment and structure
>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 Back     alignment and structure
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 Back     alignment and structure
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 Back     alignment and structure
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 Back     alignment and structure
>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 Back     alignment and structure
>pdb|4A1Z|A Chain A, Eg5-1 Length = 368 Back     alignment and structure
>pdb|4A28|A Chain A, Eg5-2 Length = 368 Back     alignment and structure
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 Back     alignment and structure
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 Back     alignment and structure
>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 Back     alignment and structure
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 Back     alignment and structure
>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 Back     alignment and structure
>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 Back     alignment and structure
>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 Back     alignment and structure
>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 Back     alignment and structure
>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 Back     alignment and structure
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 Back     alignment and structure
>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 Back     alignment and structure
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 Back     alignment and structure
>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 Back     alignment and structure
>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 Back     alignment and structure
>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 Back     alignment and structure
>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 Back     alignment and structure
>pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 Back     alignment and structure
>pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 Back     alignment and structure
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 Back     alignment and structure
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 Back     alignment and structure
>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 Back     alignment and structure
>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 Back     alignment and structure
>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 Back     alignment and structure
>pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 Back     alignment and structure
>pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1032
3u06_A412 Protein claret segregational; motor domain, stalk 0.0
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 0.0
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 0.0
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 0.0
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 1e-179
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 1e-179
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 1e-178
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 1e-157
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 1e-137
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 1e-136
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 1e-135
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 1e-134
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 1e-132
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 1e-129
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 1e-127
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 1e-126
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 1e-125
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 1e-125
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 1e-124
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 1e-123
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 1e-122
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 1e-121
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 1e-118
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 1e-115
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 1e-114
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 1e-112
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 2e-30
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 3e-30
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 6e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-13
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 6e-09
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-05
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 4e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 3e-12
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-10
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-10
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-10
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 4e-10
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 4e-04
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 1e-11
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 8e-08
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 2e-08
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 2e-07
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 5e-07
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 1e-06
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 2e-06
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 2e-05
1f5n_A592 Interferon-induced guanylate-binding protein 1; GB 5e-07
1f5n_A592 Interferon-induced guanylate-binding protein 1; GB 2e-05
1f5n_A592 Interferon-induced guanylate-binding protein 1; GB 4e-05
2efr_A155 General control protein GCN4 and tropomyosin 1 Al; 1e-06
2efr_A155 General control protein GCN4 and tropomyosin 1 Al; 2e-05
2v71_A189 Nuclear distribution protein NUDE-like 1; developm 2e-06
2v71_A189 Nuclear distribution protein NUDE-like 1; developm 4e-04
3o0z_A168 RHO-associated protein kinase 1; coiled-coil, tran 6e-06
3o0z_A168 RHO-associated protein kinase 1; coiled-coil, tran 5e-04
2l7b_A307 Apolipoprotein E, APO-E; lipid transport, atherosc 2e-05
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 8e-05
3na7_A256 HP0958; flagellar biogenesis, flagellum export, C4 8e-05
3na7_A256 HP0958; flagellar biogenesis, flagellum export, C4 2e-04
2b9c_A147 Striated-muscle alpha tropomyosin; alpha-helix, co 1e-04
2p01_A323 Alpha-2-macroglobulin receptor-associated protein; 2e-04
2zuo_A861 MVP, major vault protein; repeat domains, protein- 3e-04
3r2p_A185 Apolipoprotein A-I; amphipathic alpha-helix, major 4e-04
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 4e-04
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 7e-04
1bf5_A 575 Signal transducer and activator of transcription 1 8e-04
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 Back     alignment and structure
 Score =  573 bits (1478), Expect = 0.0
 Identities = 154/423 (36%), Positives = 223/423 (52%), Gaps = 17/423 (4%)

Query: 316 MKKEHSQLSREAHECADSIPELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQT 375
           M   H+ LS E         EL +     +   A+ E  K +  +   +RKEL+N +   
Sbjct: 1   MGSMHAALSTEVVHLRQRTEELLRCN---EQQAAELETCKEQLFQSNMERKELHNTVMDL 57

Query: 376 RGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLT----GSSTRKTFKFDRVFTP 431
           R NIRVFCR RP  + E +  C T    D     EL  +         ++ F FD+VF P
Sbjct: 58  RDNIRVFCRIRPPLESEENRMCCTWTYHDE-STVELQSIDAQAKSKMGQQIFSFDQVFHP 116

Query: 432 NDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFE- 490
              Q D+F   SPL+ S LDGYN+CIFAYGQTG+GKT+TM+G  +S GV  RT++ LF+ 
Sbjct: 117 LSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDS 176

Query: 491 IAKERSETFTYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNS 550
           I   R+  + Y I  + LE+YNE + DLL+      ++ + ++++   +V  I E  V  
Sbjct: 177 IRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLD 236

Query: 551 IREAWNVLQTGSSARAVGSNNVNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGS 610
                +++ T    RA  S   NE SSRSH +  + +  ++    E +   + LVDLAGS
Sbjct: 237 PNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGS 296

Query: 611 ERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSK 670
           E          R+ E +NINRSLS L +VI +L  K +HIPYRNSKLTHLL  SLGG+SK
Sbjct: 297 ESP----KTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 352

Query: 671 TLMFVQISPSEQDLSETLSSLNFATQVRGVELGPARKQIDTSELQKMKVMLEKARQDSRS 730
           TLMF+ +SP +    E++ SL FA  V   ++  A++    +      V     + ++  
Sbjct: 353 TLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNN----SVANSSTQSNNSG 408

Query: 731 KDE 733
             +
Sbjct: 409 SFD 411
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 Back     alignment and structure
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 Back     alignment and structure
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 Back     alignment and structure
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 Back     alignment and structure
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 Back     alignment and structure
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 Back     alignment and structure
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 Back     alignment and structure
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 Back     alignment and structure
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 Back     alignment and structure
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 Back     alignment and structure
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens} Length = 307 Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Length = 210 Back     alignment and structure
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Length = 256 Back     alignment and structure
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Length = 256 Back     alignment and structure
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 Length = 147 Back     alignment and structure
>2p01_A Alpha-2-macroglobulin receptor-associated protein; RAP, cell adhesion; NMR {Homo sapiens} PDB: 2p03_A Length = 323 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A Length = 185 Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Length = 476 Back     alignment and structure
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 Length = 575 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1032
d2ncda_368 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 1e-89
d1bg2a_323 c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId 1e-88
d1ry6a_330 c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu 3e-78
d1sdma_364 c.37.1.9 (A:) Kinesin heavy chain-like protein {Po 8e-78
d1goja_354 c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 1e-77
d2zfia1349 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), 5e-77
d1x88a1345 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), 7e-77
d1f9va_342 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 2e-76
d1v8ka_362 c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c 2e-70
d1f5na1300 a.114.1.1 (A:284-583) Interferon-induced guanylate 4e-05
d1f5na1300 a.114.1.1 (A:284-583) Interferon-induced guanylate 0.002
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  289 bits (740), Expect = 1e-89
 Identities = 140/367 (38%), Positives = 203/367 (55%), Gaps = 8/367 (2%)

Query: 336 ELNKMVIGVQALVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISA 395
              +++   +   A+ E  K +  +   +RKEL+N +   RGNIRVFCR RP  + E + 
Sbjct: 4   RTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENR 63

Query: 396 GCATVVDFDAAK---DGELGVLTGSSTRKTFKFDRVFTPNDGQVDVFADASPLVISVLDG 452
            C T    D +                ++ F FD+VF P   Q D+F   SPL+ S LDG
Sbjct: 64  MCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDG 123

Query: 453 YNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKERS-ETFTYNISVSVLEVY 511
           YN+CIFAYGQTG+GKT+TM+G  +S GV  RT++ LF+  +      + Y I  + LE+Y
Sbjct: 124 YNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 183

Query: 512 NEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNN 571
           NE + DLL+      ++ + ++++   +V  I E  V       +++ T    RA  S  
Sbjct: 184 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTA 243

Query: 572 VNEHSSRSHCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINR 631
            NE SSRSH +  + +  ++    E +   + LVDLAG    + +     R+ E +NINR
Sbjct: 244 GNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAG----SESPKTSTRMTETKNINR 299

Query: 632 SLSALGDVIYSLATKSNHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSEQDLSETLSSL 691
           SLS L +VI +L  K +HIPYRNSKLTHLL  SLGG+SKTLMF+ +SP +    E++ SL
Sbjct: 300 SLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSL 359

Query: 692 NFATQVR 698
            FA  V 
Sbjct: 360 RFAASVN 366
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 Back     information, alignment and structure
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 Back     information, alignment and structure
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300 Back     information, alignment and structure
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1032
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 100.0
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 100.0
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 100.0
d1v8ka_362 Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 100.0
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 100.0
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 100.0
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 100.0
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 100.0
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.53
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 89.35
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=0  Score=667.32  Aligned_cols=347  Identities=41%  Similarity=0.633  Sum_probs=313.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEE------CCCCC
Q ss_conf             999999999988999999998778754218988999975699932123799129982389988125873------89675
Q 001679          347 LVAQCEDFKMKYSEEQAKRKELYNQIQQTRGNIRVFCRCRPLNKVEISAGCATVVDFDAAKDGELGVLT------GSSTR  420 (1032)
Q Consensus       347 ~~~~~~~l~~~~~~e~~~Rr~l~N~~~elkGnIrV~~RvRP~~~~E~~~~~~~vv~~~~~~~~~~~~~~------~~~~~  420 (1032)
                      +..+.+.+...+.++...||+|||++.|+||||||||||||+++.|...+...++..+.   ..+.+..      .....
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~   91 (368)
T d2ncda_          15 QAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDE---STVELQSIDAQAKSKMGQ   91 (368)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETT---TEEEEECSCHHHHTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCC---CEEEECCCCCCCCCCCCC
T ss_conf             99999999999999999999987489975699799999078990102789857995799---869970688655677686


Q ss_pred             EEEECCEEECCCCCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH-CCCCC
Q ss_conf             02331358799998403431326779997457553799520369994548603688985057689999999871-17881
Q 001679          421 KTFKFDRVFTPNDGQVDVFADASPLVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQSRGVNYRTLEQLFEIAKE-RSETF  499 (1032)
Q Consensus       421 k~F~FD~VF~~~~sQ~evf~~v~plV~~~l~G~N~~IfaYGqTgSGKTyTm~G~~~~~GIiprai~~LF~~~~~-~~~~~  499 (1032)
                      +.|.||+||+++++|++||+.+.|+|+++++|||+||||||||||||||||+|++.++||+||++.+||..+.. ...++
T Consensus        92 ~~F~FD~vf~~~~~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf~~~~~~~~~~~  171 (368)
T d2ncda_          92 QIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGW  171 (368)
T ss_dssp             CEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHHTTSC
T ss_pred             EEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             46677858799998621499999889877503651377311578756067136664434466799987645443202455


Q ss_pred             EEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             36335649998768100035888888532101368996121893899937968888999720002543467888888887
Q 001679          500 TYNISVSVLEVYNEQIRDLLATSPTSKKLEIKQSSEGSHHVPGIVEANVNSIREAWNVLQTGSSARAVGSNNVNEHSSRS  579 (1032)
Q Consensus       500 ~~~V~vS~~EIYnE~i~DLL~~~~~~~~l~i~~~~~~~~~v~glte~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRS  579 (1032)
                      .|.|.+||+|||||.|+|||++........+++++.++++++|++++.|.+++++..++..|.++|.++.|.+|.+||||
T Consensus       172 ~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~~ssrS  251 (368)
T d2ncda_         172 EYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRS  251 (368)
T ss_dssp             EEEEEEEEEEESSSCEEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTTTTTTC
T ss_pred             CCEEEEEEEEEECCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             52689999988656020125642135431130266644233443022047778899999998751124422146545554


Q ss_pred             CEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             30799999985358884443226675459986667777423338999787774875699999971289863477881001
Q 001679          580 HCMLCIMVRAKNLISGECTKSKLWLVDLAGSERLTRTDVQGDRLKEAQNINRSLSALGDVIYSLATKSNHIPYRNSKLTH  659 (1032)
Q Consensus       580 H~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~s~~~g~rlkE~~~INkSL~aLg~VI~aL~~~~~hvPyRdSKLT~  659 (1032)
                      |+||+|.+...+...+....|+|+||||||||+...    +.+++|+.+||+||++|++||.+|+.++.|||||+||||+
T Consensus       252 h~i~~i~v~~~~~~~~~~~~s~l~~VDLAGse~~~~----~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPyR~SkLT~  327 (368)
T d2ncda_         252 HAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKT----STRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTH  327 (368)
T ss_dssp             EEEEEEEEEEECTTSCCEEEEEEEEEECCCCCCC--------------CTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHH
T ss_pred             CEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCH----HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf             327899999976698856765444422010233102----3210245520264999999999986589989975788899


Q ss_pred             HHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             10012499960689997179986868679899999771034
Q 001679          660 LLQDSLGGDSKTLMFVQISPSEQDLSETLSSLNFATQVRGV  700 (1032)
Q Consensus       660 LLqdsLgGnskt~mI~~ISP~~~~~~ETl~TL~fA~r~~~i  700 (1032)
                      ||+|+||||++|+||+||||+..+++||++||+||+||+++
T Consensus       328 lL~dsLggns~t~mI~~isp~~~~~~eTl~TL~fa~rak~~  368 (368)
T d2ncda_         328 LLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSC  368 (368)
T ss_dssp             HHGGGSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             98985599870999999798735499999999999997569
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure