Citrus Sinensis ID: 001708

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020--
MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAISSRSPYASSSSLSSIMTEPEKKIETAEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKAQQKQEQGGNSLKKSVKKNVKRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFGLLPLKIVVA
ccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccEEcccccccccccccccccccccEEEEEEEEEEcccccccEEEEccccccccccEEEEEcccccccccccccEEEcccccccccEEEcccccccccccccccccccccHHHHHHHHccccccccEEccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEccccHHHHHHHHccccccHHHHHHHcccccccEEEEcccccccccccccccEEEEccHHHHHHHHHHHcccccccEEEccccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHccccccccccccEEEcccccccccccccccccccccHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccHHHHHHHHHHHHHHHHHHccccEEEccccccccccccc
cccccccHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHHccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcccccccHHHcccccHHHHHHHHHHHHHHHcccEEEccEEEccccHHccEEccEEEEcEcccccEEEcccccccccEEEEEEEEEEEccccccEEEEEEccHcHHccccEEEEccccHHHHHHcccEEEEcccccEccEEEcHHcccccccccEEEEcccccccccHccccccccEEEEEcccccccccccHHHccccHHHHHHHHHHHHHHccccEEEcccccEEccccccccEEcccccccEEEccHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccEEEEccHHHHHHHHHHHcccccEEEcccccHHHHHHHcccccHHHcccccccHHHHHcccccHHHcHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEcccccccccccccccccccEEccccHHHHHHHHHcccccHHHHHHHHHccHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccc
MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAIssrspyasssslssimtepekkiETAEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKAQQKqeqggnslkKSVKknvkrddgednaeefvdpetplgekkRMSKQMakeynpssvekSWYSWWENsgyfiadnksskpsfvivlpppnvtgalHIGHALTTAIQDTIIRWRRMSgynalwvpgmdhagiATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRlgasldwsrecftMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISdievdyvdipkremrnvpgyekqVEFGVLTsfayplegglgEIVVATTRVETMLGdtaiaihpedaryshlhgkfaihpfngrkipiicdailvdpkfgtgavkitpahdpndfdvgkrhnLEFINIFtddgkinsngglefegmprfKAREAVNEALKKKglyrgakdnemrlglcsrsndvvepmikpqwyvnCNSMAMEALYAVMDddkkkleliPRQYTAEWRRWLEAIRDWCVSRqlwwghqipawyvtleddelkelgsyndhwivARDEKEALAVANKKfsgkkfemcqdpdvldtwfssglfplsvlgwpddtddlkafyptsvletgHDILFFWVARMVMLGIKlggevpftkvylhpmirdahgRKMSkslgnvidpleviNGISLEGLHKrleegnldpkeLEVAkkgqkadfpngipecgtDALRFALVSYTaqsdkinldIQRVVGYRQWCNKLWNAVRFSmsklgegfvpplklhphnlpfscKWILSVLNKAISRTAsslnsyefsdAASTVYSWWQYQFCDVFIEAikpyfagdnpafasERSAAQHVLWVCLETglrllhpfmpfvTEELwqrlpqpkgcatkesimlceypsavegwtDERAEFEMDLVESTVRCIRSLRAEVLgkqknerlpaiAFCQTKGVSEIIRSHELEIVTLStssslkalsfgllplkivva
MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAIssrspyasssslssimtepekkietaedlerkkkkeekakeKELKKLKALEKAEQAKLKaqqkqeqggnslkksvkknvkrddgednaeefvdpetplgekkrmskqmakeynpssveksWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRerkltrhdigreqfvsevWKWKDEYGGtilrqqrrlgasldwSRECFtmdekrskavTEAFVRLYKEgliyrdlrlvnWDCVLRTAisdievdyvdipkreMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALkkkglyrgakdnemrlglcsrsndvvepmiKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTaqsdkinldIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAevlgkqknerlpaiafCQTKGVSEIIRSHELEIVTLstssslkalsfgllplkivva
MLSSFRTRTRIlllspllhsaaasvsdaivslaaissrspyasssslssIMTEPEKKIETAEDlerkkkkeekakekelkklkalekaeqaklkaqqkqeqggnslkksvkknvkRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVtlstssslKALSFGLLPLKIVVA
********TRILLLSPLLHSAAASVSDAIVSLA************************************************************************************************************************KSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGM**F*********L**KGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLH*************************NGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFGLLPLKIV**
*************************************************************************************************************************************************EYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNL*********KGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFGLLPLKIVV*
********TRILLLSPLLHSAAASVSDAIVSLAAISS******************KKIETAE****************LKKLKALEK***********************************AEEFVDPETPL********************KSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFGLLPLKIVVA
***SFRTRTRILLLSPLLHSAAASVSDAIVSLAAISSRSPY*******************************************************************************DNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLH*HNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFGL********
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAISSRSPYASSSSLSSIMTEPEKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGNSLKKSVKKNVKRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFGLLPLKIVVA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1022 2.2.26 [Sep-21-2011]
P937361108 Valine--tRNA ligase OS=Ar yes no 0.962 0.888 0.761 0.0
Q86KU21072 Probable valine--tRNA lig yes no 0.805 0.767 0.559 0.0
P496961217 Valine--tRNA ligase OS=Ta N/A no 0.907 0.761 0.507 0.0
P266401264 Valine--tRNA ligase OS=Ho yes no 0.811 0.655 0.549 0.0
Q044621264 Valine--tRNA ligase OS=Ra yes no 0.920 0.744 0.500 0.0
Q9Z1Q91263 Valine--tRNA ligase OS=Mu yes no 0.807 0.653 0.545 0.0
Q9U1Q41050 Valine--tRNA ligase OS=Ca yes no 0.830 0.808 0.534 0.0
O75005980 Valine--tRNA ligase OS=Sc yes no 0.863 0.9 0.511 0.0
P078061104 Valine--tRNA ligase, mito yes no 0.812 0.751 0.521 0.0
P283501093 Valine--tRNA ligase, mito N/A no 0.802 0.750 0.511 0.0
>sp|P93736|SYV_ARATH Valine--tRNA ligase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2 Back     alignment and function desciption
 Score = 1568 bits (4059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 757/994 (76%), Positives = 867/994 (87%), Gaps = 10/994 (1%)

Query: 29   IVSLAAISSRSPYAS---------SSSLSSIMTEPEKKIETAEDLERKKKKEEKAKEKEL 79
            +   +A  SRS + S         S   S  M+E EKKI T E+LERKKKKEEKAKEKEL
Sbjct: 14   VSCCSATHSRSSFLSPTLTNQLVRSFHGSRTMSESEKKILTEEELERKKKKEEKAKEKEL 73

Query: 80   KKLKALEKAEQAKLKAQQKQEQGGNSLKKSVKKNVKRDDGEDNAEEFVDPETPLGEKKRM 139
            KK KALEK   A+LKA+Q ++ G N  KKS KK+ KRD  E+N E+FVDPETPLGE+KR+
Sbjct: 74   KKQKALEKERLAELKAKQAKD-GTNVPKKSAKKSSKRDASEENPEDFVDPETPLGERKRL 132

Query: 140  SKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTA 199
            S QMAK+Y+P++VEKSWY+WWE S  F AD KSSKP FVIVLPPPNVTGALHIGHALT+A
Sbjct: 133  SSQMAKQYSPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSA 192

Query: 200  IQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKW 259
            I+DTIIRW+RMSGYNALWVPG+DHAGIATQVVVEKK+MR+R +TRHD+GRE+FV EVWKW
Sbjct: 193  IEDTIIRWKRMSGYNALWVPGVDHAGIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWKW 252

Query: 260  KDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDC 319
            K++YGGTIL Q RRLGASLDWSRECFTMDE+RSKAVTEAFVRLYKEGLIYRD+RLVNWDC
Sbjct: 253  KNQYGGTILTQLRRLGASLDWSRECFTMDEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDC 312

Query: 320  VLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETM 379
            +LRTAISD+EV+Y+DI ++ +  VPGYEK VEFG+LTSFAYPLEGGLGE++VATTRVETM
Sbjct: 313  ILRTAISDVEVEYIDIKEKTLLKVPGYEKPVEFGLLTSFAYPLEGGLGEVIVATTRVETM 372

Query: 380  LGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPND 439
            LGDTAIAIHP+DARY HLHGKFA+HPFNGRK+PIICD ILVDP FGTG VKITPAHDPND
Sbjct: 373  LGDTAIAIHPDDARYKHLHGKFAVHPFNGRKLPIICDGILVDPNFGTGCVKITPAHDPND 432

Query: 440  FDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMR 499
             +VGKRH LEFINIFTDDGKIN+NGG +F GMPRF AREAV EAL+K+GLYRGAK+NEMR
Sbjct: 433  CEVGKRHKLEFINIFTDDGKINTNGGSDFAGMPRFAAREAVVEALQKQGLYRGAKNNEMR 492

Query: 500  LGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAI 559
            LGLCSR+NDV+EPMIKPQWYVNC+ +  EAL   + D+ KKLE +P+QYTAEWRRWLE I
Sbjct: 493  LGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRRWLENI 552

Query: 560  RDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFE 619
            RDWC+SRQLWWGH+IPAWY TLE+D+LKE+G+Y+DHW+VAR E +A   A +KF GKKFE
Sbjct: 553  RDWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKKFE 612

Query: 620  MCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIK 679
            + +DPDVLDTWFSSGLFPLSVLGWPD TDD KAFYPTSVLETGHDILFFWVARMVM+G+K
Sbjct: 613  LTRDPDVLDTWFSSGLFPLSVLGWPDVTDDFKAFYPTSVLETGHDILFFWVARMVMMGMK 672

Query: 680  LGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKEL 739
            LGGEVPF+KVY HPMIRDAHGRKMSKSLGNVIDPLEVING++LEGLHKRLEEGNLDPKE+
Sbjct: 673  LGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDPKEV 732

Query: 740  EVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRF 799
             VAK+GQ  DFPNGIPECGTDALRFALVSYTAQSDKINLDI RVVGYRQWCNKLWNAVRF
Sbjct: 733  IVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWNAVRF 792

Query: 800  SMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQY 859
            +M KLG+G+ PP  L P  +PFSC+WILSVLNKAIS+T  SL+++EFSDAA+T+Y+WWQY
Sbjct: 793  AMMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAISKTVVSLDAFEFSDAANTIYAWWQY 852

Query: 860  QFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQ 919
            QFCDV+IEAIKPYFAGDNP FASER+ AQH LW+ LETGLRLLHPFMPFVTEELWQRLP 
Sbjct: 853  QFCDVYIEAIKPYFAGDNPTFASERAHAQHALWISLETGLRLLHPFMPFVTEELWQRLPA 912

Query: 920  PKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAI 979
            PK    K SIM+C+YPSA+E W++E+ E EMD V +TV+C+R+LRA +L KQKNERLPA 
Sbjct: 913  PKDTERKASIMICDYPSAIENWSNEKVESEMDTVLATVKCMRALRAGLLEKQKNERLPAF 972

Query: 980  AFCQTKGVSEIIRSHELEIVTLSTSSSLKALSFG 1013
            A C+    SEI++SHELEI TL+  SSL+ +S G
Sbjct: 973  ALCENNVTSEIVKSHELEIRTLANLSSLEVVSKG 1006

Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 9
>sp|Q86KU2|SYVC_DICDI Probable valine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=valS1 PE=3 SV=1 Back     alignment and function description
>sp|P49696|SYVC_TAKRU Valine--tRNA ligase OS=Takifugu rubripes GN=vars PE=3 SV=1 Back     alignment and function description
>sp|P26640|SYVC_HUMAN Valine--tRNA ligase OS=Homo sapiens GN=VARS PE=1 SV=4 Back     alignment and function description
>sp|Q04462|SYVC_RAT Valine--tRNA ligase OS=Rattus norvegicus GN=Vars PE=2 SV=2 Back     alignment and function description
>sp|Q9Z1Q9|SYVC_MOUSE Valine--tRNA ligase OS=Mus musculus GN=Vars PE=2 SV=1 Back     alignment and function description
>sp|Q9U1Q4|SYV_CAEEL Valine--tRNA ligase OS=Caenorhabditis elegans GN=vrs-2 PE=1 SV=1 Back     alignment and function description
>sp|O75005|SYV_SCHPO Valine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vas2 PE=3 SV=1 Back     alignment and function description
>sp|P07806|SYV_YEAST Valine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VAS1 PE=1 SV=2 Back     alignment and function description
>sp|P28350|SYV_NEUCR Valine--tRNA ligase, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cyt-20 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1022
2555790571065 valyl-tRNA synthetase, putative [Ricinus 0.889 0.853 0.804 0.0
152238291108 Valyl-tRNA synthetase [Arabidopsis thali 0.962 0.888 0.761 0.0
170652341064 similar to valyl tRNA synthetase [Arabid 0.941 0.904 0.778 0.0
75277261115 T5E21.11 [Arabidopsis thaliana] 0.944 0.865 0.771 0.0
2978498741108 hypothetical protein ARALYDRAFT_471639 [ 0.944 0.870 0.772 0.0
2977411171106 unnamed protein product [Vitis vinifera] 0.900 0.831 0.779 0.0
3594904041071 PREDICTED: valyl-tRNA synthetase-like [V 0.900 0.859 0.779 0.0
18901301107 valyl tRNA synthetase [Arabidopsis thali 0.961 0.887 0.756 0.0
2240972731054 predicted protein [Populus trichocarpa] 0.871 0.845 0.792 0.0
3565359081050 PREDICTED: valyl-tRNA synthetase-like is 0.866 0.843 0.772 0.0
>gi|255579057|ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis] gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1575 bits (4079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 737/916 (80%), Positives = 808/916 (88%), Gaps = 7/916 (0%)

Query: 99   QEQGGNSLKKSV--KKNVKRDDG--EDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEK 154
            Q+ GGN+  K    KKN +RD G  E+N E   DP TP GE+K++S QMAK+Y+PS+VEK
Sbjct: 49   QQSGGNAATKKSGPKKNARRDVGGTEENPE---DPHTPFGERKKLSAQMAKQYSPSAVEK 105

Query: 155  SWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYN 214
            SWY+WWE SGYF A  KSSKP F IV PPPNVTGALHIGHALT A++DTIIRWRRMSGYN
Sbjct: 106  SWYAWWEKSGYFTAHAKSSKPPFTIVFPPPNVTGALHIGHALTAAVEDTIIRWRRMSGYN 165

Query: 215  ALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRL 274
             LWVPG+DHAGIATQVVVEKKLMRER LTRHDIGREQFVSEVWKWK+EYGGTIL Q RRL
Sbjct: 166  TLWVPGVDHAGIATQVVVEKKLMRERHLTRHDIGREQFVSEVWKWKEEYGGTILGQLRRL 225

Query: 275  GASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVD 334
            GASLDWSRECFTMDEKRSKAV E FVRLYKEGLIYRDLRLVNWDC LRTAISDIEVDY D
Sbjct: 226  GASLDWSRECFTMDEKRSKAVIEEFVRLYKEGLIYRDLRLVNWDCTLRTAISDIEVDYTD 285

Query: 335  IPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARY 394
            I ++ +  VPGY+K VEFG+LTSFAYPLEG LGEIVVATTR+ETMLGDTAIAIHP+D RY
Sbjct: 286  IKEKTLLKVPGYDKPVEFGLLTSFAYPLEGDLGEIVVATTRIETMLGDTAIAIHPDDQRY 345

Query: 395  SHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIF 454
            SHLHGKFAIHPFNGR++PIICD++LVDP FGTGAVKITPAHDPNDF+VGKRHNLEFINIF
Sbjct: 346  SHLHGKFAIHPFNGRRLPIICDSVLVDPNFGTGAVKITPAHDPNDFEVGKRHNLEFINIF 405

Query: 455  TDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMI 514
            TDDGKINSNGG EF G+PRF+AREAV EAL++KGLYRGAK+NEMRLG CSRSN+VVEPMI
Sbjct: 406  TDDGKINSNGGSEFTGIPRFRAREAVTEALQEKGLYRGAKNNEMRLGCCSRSNEVVEPMI 465

Query: 515  KPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQI 574
            KPQW+VNC++MA +AL A  D +  KLE  P+QY A+W+RWLE IRDWC+SRQLWWGH+I
Sbjct: 466  KPQWFVNCSTMAKQALDAAFDGENPKLEFFPKQYLADWKRWLENIRDWCISRQLWWGHRI 525

Query: 575  PAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSG 634
            PAWY+TLEDDELKE G YNDHW+V RDEKEAL  A+ KF+GKKFEM QDPDVLDTWFSSG
Sbjct: 526  PAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFAGKKFEMSQDPDVLDTWFSSG 585

Query: 635  LFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPM 694
            LFPLSVLGWPDDTDDLK FYPTSVLETGHDILFFWVARMVMLGI L G+VPF KVYLHPM
Sbjct: 586  LFPLSVLGWPDDTDDLKTFYPTSVLETGHDILFFWVARMVMLGITLRGDVPFRKVYLHPM 645

Query: 695  IRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGI 754
            IRDAHGRKMSKSLGNVIDPLEVINGI+LEGLHKRLEEGNLDP EL  AK GQK DFPNGI
Sbjct: 646  IRDAHGRKMSKSLGNVIDPLEVINGINLEGLHKRLEEGNLDPNELVTAKDGQKKDFPNGI 705

Query: 755  PECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKL 814
             ECG DALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRF+MSKL   + PPL L
Sbjct: 706  AECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLDADYSPPLTL 765

Query: 815  HPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFA 874
            H   LPFSCKWILS LNKAI+RT S++NSYEFSDAASTVYSWWQYQFCDVFIEAIKPYF 
Sbjct: 766  HTEALPFSCKWILSALNKAIARTVSAMNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFV 825

Query: 875  GDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEY 934
            GDNP +AS ++AAQ  LWVCL+ GLRLLHPFMPFVTEELWQRLP  +    K+SIM+ EY
Sbjct: 826  GDNPEYASAKNAAQGTLWVCLDNGLRLLHPFMPFVTEELWQRLPSARDHTRKDSIMISEY 885

Query: 935  PSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSH 994
            PSAVE WT+E+ E+EMDLVESTV+C+RSLR EVLGKQKNERLPA AFCQ+  V+ II SH
Sbjct: 886  PSAVEAWTNEQVEYEMDLVESTVKCVRSLRGEVLGKQKNERLPAFAFCQSDEVARIISSH 945

Query: 995  ELEIVTLSTSSSLKAL 1010
            ELEI+TL+T SSL+ L
Sbjct: 946  ELEILTLATLSSLEVL 961

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15223829|ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana] gi|21542452|sp|P93736.2|SYV_ARATH RecName: Full=Valine--tRNA ligase; AltName: Full=Valyl-tRNA synthetase; Short=ValRS gi|332191069|gb|AEE29190.1| Valyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|17065234|gb|AAL32771.1| similar to valyl tRNA synthetase [Arabidopsis thaliana] gi|38564252|gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7527726|gb|AAF63175.1|AC010657_11 T5E21.11 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297849874|ref|XP_002892818.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp. lyrata] gi|297338660|gb|EFH69077.1| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297741117|emb|CBI31848.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359490404|ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|1890130|gb|AAB49704.1| valyl tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224097273|ref|XP_002310896.1| predicted protein [Populus trichocarpa] gi|222853799|gb|EEE91346.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356535908|ref|XP_003536484.1| PREDICTED: valyl-tRNA synthetase-like isoform 1 [Glycine max] gi|356535910|ref|XP_003536485.1| PREDICTED: valyl-tRNA synthetase-like isoform 2 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1022
TAIR|locus:22045431108 TWN2 "TWIN 2" [Arabidopsis tha 0.878 0.810 0.780 0.0
DICTYBASE|DDB_G02777331072 valS1 "valyl tRNA synthetase" 0.807 0.769 0.558 5.9e-263
ZFIN|ZDB-GENE-010601-11264 vars "valyl-tRNA synthetase" [ 0.841 0.680 0.532 1.1e-260
FB|FBgn00270791049 Aats-val "Valyl-tRNA synthetas 0.833 0.812 0.548 3.8e-260
UNIPROTKB|E2RTJ71264 VARS "Uncharacterized protein" 0.810 0.655 0.552 7.2e-257
UNIPROTKB|B0V0431264 VARS "Valine--tRNA ligase" [Ho 0.810 0.655 0.554 4.5e-255
UNIPROTKB|H0Y4A61183 VARS "Valine--tRNA ligase" [Ho 0.810 0.699 0.554 4.5e-255
UNIPROTKB|P266401264 VARS "Valine--tRNA ligase" [Ho 0.810 0.655 0.554 4.5e-255
MGI|MGI:906751263 Vars "valyl-tRNA synthetase" [ 0.809 0.654 0.547 2.5e-254
UNIPROTKB|E1BLV61001 VARS "Uncharacterized protein" 0.811 0.828 0.550 1.6e-253
TAIR|locus:2204543 TWN2 "TWIN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3914 (1382.9 bits), Expect = 0., Sum P(2) = 0.
 Identities = 701/898 (78%), Positives = 800/898 (89%)

Query:   116 RDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKP 175
             RD  E+N E+FVDPETPLGE+KR+S QMAK+Y+P++VEKSWY+WWE S  F AD KSSKP
Sbjct:   109 RDASEENPEDFVDPETPLGERKRLSSQMAKQYSPATVEKSWYAWWEKSDLFKADAKSSKP 168

Query:   176 SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKK 235
              FVIVLPPPNVTGALHIGHALT+AI+DTIIRW+RMSGYNALWVPG+DHAGIATQVVVEKK
Sbjct:   169 PFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGVDHAGIATQVVVEKK 228

Query:   236 LMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAV 295
             +MR+R +TRHD+GRE+FV EVWKWK++YGGTIL Q RRLGASLDWSRECFTMDE+RSKAV
Sbjct:   229 IMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSRECFTMDEQRSKAV 288

Query:   296 TEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVL 355
             TEAFVRLYKEGLIYRD+RLVNWDC+LRTAISD+EV+Y+DI ++ +  VPGYEK VEFG+L
Sbjct:   289 TEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVEVEYIDIKEKTLLKVPGYEKPVEFGLL 348

Query:   356 TSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIIC 415
             TSFAYPLEGGLGE++VATTRVETMLGDTAIAIHP+DARY HLHGKFA+HPFNGRK+PIIC
Sbjct:   349 TSFAYPLEGGLGEVIVATTRVETMLGDTAIAIHPDDARYKHLHGKFAVHPFNGRKLPIIC 408

Query:   416 DAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFK 475
             D ILVDP FGTG VKITPAHDPND +VGKRH LEFINIFTDDGKIN+NGG +F GMPRF 
Sbjct:   409 DGILVDPNFGTGCVKITPAHDPNDCEVGKRHKLEFINIFTDDGKINTNGGSDFAGMPRFA 468

Query:   476 AREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMD 535
             AREAV EAL+K+GLYRGAK+NEMRLGLCSR+NDV+EPMIKPQWYVNC+ +  EAL   + 
Sbjct:   469 AREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAIT 528

Query:   536 DDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDH 595
             D+ KKLE +P+QYTAEWRRWLE IRDWC+SRQLWWGH+IPAWY TLE+D+LKE+G+Y+DH
Sbjct:   529 DENKKLEFVPKQYTAEWRRWLENIRDWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDH 588

Query:   596 WIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYP 655
             W+VAR E +A   A +KF GKKFE+ +DPDVLDTWFSSGLFPLSVLGWPD TDD KAFYP
Sbjct:   589 WVVARTEDDAREEAAQKFLGKKFELTRDPDVLDTWFSSGLFPLSVLGWPDVTDDFKAFYP 648

Query:   656 TSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLE 715
             TSVLETGHDILFFWVARMVM+G+KLGGEVPF+KVY HPMIRDAHGRKMSKSLGNVIDPLE
Sbjct:   649 TSVLETGHDILFFWVARMVMMGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLE 708

Query:   716 VINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDK 775
             VING++LEGLHKRLEEGNLDPKE+ VAK+GQ  DFPNGIPECGTDALRFALVSYTAQSDK
Sbjct:   709 VINGVTLEGLHKRLEEGNLDPKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDK 768

Query:   776 INLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAIS 835
             INLDI RVVGYRQWCNKLWNAVRF+M KLG+G+ PP  L P  +PFSC+WILSVLNKAIS
Sbjct:   769 INLDILRVVGYRQWCNKLWNAVRFAMMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAIS 828

Query:   836 RTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCL 895
             +T  SL+++EFSDAA+T+Y+WWQYQFCDV+IEAIKPYFAGDNP FASER+ AQH LW+ L
Sbjct:   829 KTVVSLDAFEFSDAANTIYAWWQYQFCDVYIEAIKPYFAGDNPTFASERAHAQHALWISL 888

Query:   896 ETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVES 955
             ETGLRLLHPFMPFVTEELWQRLP PK    K SIM+C+YPSA+E W++E+ E EMD V +
Sbjct:   889 ETGLRLLHPFMPFVTEELWQRLPAPKDTERKASIMICDYPSAIENWSNEKVESEMDTVLA 948

Query:   956 TVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVXXXXXXXXKALSFG 1013
             TV+C+R+LRA +L KQKNERLPA A C+    SEI++SHELEI         + +S G
Sbjct:   949 TVKCMRALRAGLLEKQKNERLPAFALCENNVTSEIVKSHELEIRTLANLSSLEVVSKG 1006
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS
GO:0004832 "valine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS
GO:0006438 "valyl-tRNA aminoacylation" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
DICTYBASE|DDB_G0277733 valS1 "valyl tRNA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-010601-1 vars "valyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0027079 Aats-val "Valyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2RTJ7 VARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B0V043 VARS "Valine--tRNA ligase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y4A6 VARS "Valine--tRNA ligase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P26640 VARS "Valine--tRNA ligase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:90675 Vars "valyl-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BLV6 VARS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P07806SYV_YEAST6, ., 1, ., 1, ., 90.52110.81210.7518yesno
Q86KU2SYVC_DICDI6, ., 1, ., 1, ., 90.55970.80520.7677yesno
Q9Z1Q9SYVC_MOUSE6, ., 1, ., 1, ., 90.54540.80720.6532yesno
Q3SL86SYV_THIDA6, ., 1, ., 1, ., 90.44250.80430.9013yesno
P26640SYVC_HUMAN6, ., 1, ., 1, ., 90.54910.81110.6558yesno
O75005SYV_SCHPO6, ., 1, ., 1, ., 90.51100.86300.9yesno
Q04462SYVC_RAT6, ., 1, ., 1, ., 90.50050.92070.7444yesno
Q9U1Q4SYV_CAEEL6, ., 1, ., 1, ., 90.53430.83070.8085yesno
P93736SYV_ARATH6, ., 1, ., 1, ., 90.76150.96280.8880yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.90.991
3rd Layer6.1.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
TWN2
TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / valine-tRNA ligase; Required for proper proliferation of basal cells. (1108 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G26830
threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS); Encodes a dual-targeted threonyl-tRN [...] (709 aa)
•  •  • 0.984
ALATS
ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tR [...] (1003 aa)
   •  • 0.969
BCAT6
branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) [...] (356 aa)
     •• 0.909
BCAT3
BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic; E [...] (413 aa)
     •• 0.907
BCAT7
aminotransferase class IV family protein; aminotransferase class IV family protein; FUNCTIONS I [...] (367 aa)
     •• 0.906
BCAT4
BCAT4 (BRANCHED-CHAIN AMINOTRANSFERASE4); catalytic/ methionine-oxo-acid transaminase; Belongs [...] (354 aa)
     •• 0.905
ATBCAT-2
ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino- [...] (388 aa)
     •• 0.905
ATBCAT-5
ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic; encodes a chloroplast branched-cha [...] (415 aa)
     •• 0.905
AT5G57850
aminotransferase class IV family protein; aminotransferase class IV family protein; FUNCTIONS I [...] (373 aa)
     •• 0.903
ATBCAT-1
branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1) [...] (384 aa)
     •• 0.901

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1022
PLN023811066 PLN02381, PLN02381, valyl-tRNA synthetase 0.0
PTZ00419995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 0.0
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 0.0
COG0525877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 0.0
TIGR00422861 TIGR00422, valS, valyl-tRNA synthetase 0.0
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 0.0
PLN02943958 PLN02943, PLN02943, aminoacyl-tRNA ligase 0.0
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 0.0
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 1e-156
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 1e-110
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 1e-106
COG0060933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 2e-97
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 3e-90
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 7e-79
PRK05743912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 2e-68
cd07962135 cd07962, Anticodon_Ia_Val, Anticodon-binding domai 2e-55
PRK13804961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 3e-50
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 8e-45
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 4e-42
pfam08264148 pfam08264, Anticodon_1, Anticodon-binding domain o 2e-38
TIGR00395938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 1e-37
PLN02843974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 1e-37
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 3e-36
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 5e-33
TIGR00396842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 1e-29
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 3e-27
PLN02563963 PLN02563, PLN02563, aminoacyl-tRNA ligase 5e-27
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 9e-24
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 2e-22
cd07961183 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding 3e-18
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 7e-18
cd07960180 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding d 6e-17
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 1e-15
pfam13603178 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, 1e-15
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 2e-13
PLN02843974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 3e-13
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 5e-13
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 7e-13
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 9e-12
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 2e-11
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 3e-11
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 5e-11
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 7e-11
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 7e-11
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 1e-09
PRK12267648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 4e-09
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 9e-09
TIGR00396842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 9e-07
PRK12267648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 1e-06
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 2e-06
cd07959117 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding d 2e-06
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 6e-06
pfam12569516 pfam12569, NARP1, NMDA receptor-regulated protein 9e-06
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 3e-05
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 6e-05
PLN02224616 PLN02224, PLN02224, methionine-tRNA ligase 9e-05
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 2e-04
pfam09805134 pfam09805, Nop25, Nucleolar protein 12 (25kDa) 3e-04
pfam06658142 pfam06658, DUF1168, Protein of unknown function (D 3e-04
cd07958117 cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding d 4e-04
cd07957129 cd07957, Anticodon_Ia_Met, Anticodon-binding domai 6e-04
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.001
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.001
cd07375117 cd07375, Anticodon_Ia_like, Anticodon-binding doma 0.001
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 0.002
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.002
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.003
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.003
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information 
 Score = 1885 bits (4884), Expect = 0.0
 Identities = 790/966 (81%), Positives = 873/966 (90%), Gaps = 1/966 (0%)

Query: 48   SSIMTEPEKKIETAEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKAQQKQEQGGNSLK 107
            S   +E EKKI T E+LERKKKKEEKAKEKELKKLKA +K  +AKL+AQQ  + G N  K
Sbjct: 2    SRTESEAEKKILTEEELERKKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASD-GTNVPK 60

Query: 108  KSVKKNVKRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFI 167
            KS KK+ KRD  ++N E+F+DP+TP G+KKR+S QMAK+Y+PS+VEKSWY+WWE SGYF 
Sbjct: 61   KSEKKSRKRDVEDENPEDFIDPDTPFGQKKRLSSQMAKQYSPSAVEKSWYAWWEKSGYFG 120

Query: 168  ADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIA 227
            AD KSSKP FVIVLPPPNVTGALHIGHALT AI+DTIIRW+RMSGYNALWVPG+DHAGIA
Sbjct: 121  ADAKSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWKRMSGYNALWVPGVDHAGIA 180

Query: 228  TQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTM 287
            TQVVVEKKLMRER LTRHDIGRE+FVSEVWKWKDEYGGTIL Q RRLGASLDWSRECFTM
Sbjct: 181  TQVVVEKKLMRERHLTRHDIGREEFVSEVWKWKDEYGGTILNQLRRLGASLDWSRECFTM 240

Query: 288  DEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYE 347
            DE+RSKAVTEAFVRLYKEGLIYRD+RLVNWDC LRTAISD+EVDY+DI +R +  VPGY+
Sbjct: 241  DEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDCTLRTAISDVEVDYIDIKERTLLKVPGYD 300

Query: 348  KQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFN 407
            K VEFGVLTSFAYPLEGGLGEIVVATTR+ETMLGDTAIAIHP+D RY HLHGKFA+HPFN
Sbjct: 301  KPVEFGVLTSFAYPLEGGLGEIVVATTRIETMLGDTAIAIHPDDERYKHLHGKFAVHPFN 360

Query: 408  GRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLE 467
            GRK+PIICDAILVDP FGTGAVKITPAHDPNDF+VGKRHNLEFINIFTDDGKINSNGG E
Sbjct: 361  GRKLPIICDAILVDPNFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINSNGGSE 420

Query: 468  FEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAM 527
            F GMPRF AREAV EAL+KKGLYRGAK+NEMRLGLCSR+NDVVEPMIKPQW+VNC+SMA 
Sbjct: 421  FAGMPRFAAREAVIEALQKKGLYRGAKNNEMRLGLCSRTNDVVEPMIKPQWFVNCSSMAK 480

Query: 528  EALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELK 587
            +AL A +D + KKLE IP+QY AEW+RWLE IRDWC+SRQLWWGH+IPAWYVTLEDD+LK
Sbjct: 481  QALDAAIDGENKKLEFIPKQYLAEWKRWLENIRDWCISRQLWWGHRIPAWYVTLEDDQLK 540

Query: 588  ELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDT 647
            ELGSYNDHW+VAR+E +AL  A++KF GKKFE+ QDPDVLDTWFSSGLFPLSVLGWPDDT
Sbjct: 541  ELGSYNDHWVVARNESDALLEASQKFPGKKFELSQDPDVLDTWFSSGLFPLSVLGWPDDT 600

Query: 648  DDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSL 707
            DDLKAFYPTSVLETGHDILFFWVARMVM+G++LGG+VPF KVYLHPMIRDAHGRKMSKSL
Sbjct: 601  DDLKAFYPTSVLETGHDILFFWVARMVMMGMQLGGDVPFRKVYLHPMIRDAHGRKMSKSL 660

Query: 708  GNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALV 767
            GNVIDPLEVINGISLEGLHKRLEEGNLDPKEL VAK+GQK DFPNGI ECGTDALRFALV
Sbjct: 661  GNVIDPLEVINGISLEGLHKRLEEGNLDPKELVVAKEGQKKDFPNGIAECGTDALRFALV 720

Query: 768  SYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWIL 827
            SYTAQSDKINLDI RVVGYRQWCNKLWNAVRF+MSKLG+ + PP  L    +PFSCKWIL
Sbjct: 721  SYTAQSDKINLDILRVVGYRQWCNKLWNAVRFAMSKLGDDYTPPATLSVETMPFSCKWIL 780

Query: 828  SVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAA 887
            SVLNKAIS+T SSL++YEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNP FASER+AA
Sbjct: 781  SVLNKAISKTVSSLDAYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPEFASERAAA 840

Query: 888  QHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAE 947
            Q  LW+CL+TGLRLLHPFMPFVTEELWQRLPQPK    K+SIM+ EYPSAVE WT+E+ E
Sbjct: 841  QDTLWICLDTGLRLLHPFMPFVTEELWQRLPQPKDHTRKDSIMISEYPSAVEAWTNEKVE 900

Query: 948  FEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSL 1007
            +EMDLV STV+C+RSLRAEVL KQKNERLPA A C+ + ++ II+SH+LEI+TL+  SSL
Sbjct: 901  YEMDLVLSTVKCLRSLRAEVLEKQKNERLPAFALCRNQEIAAIIKSHQLEILTLANLSSL 960

Query: 1008 KALSFG 1013
            K L   
Sbjct: 961  KVLLSE 966

Length = 1066
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|153416 cd07962, Anticodon_Ia_Val, Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|153415 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|153414 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2 Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|153413 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1 Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|177869 PLN02224, PLN02224, methionine-tRNA ligase Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|220413 pfam09805, Nop25, Nucleolar protein 12 (25kDa) Back     alignment and domain information
>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168) Back     alignment and domain information
>gnl|CDD|153412 cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|153411 cd07957, Anticodon_Ia_Met, Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|153408 cd07375, Anticodon_Ia_like, Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1022
KOG0432995 consensus Valyl-tRNA synthetase [Translation, ribo 100.0
PLN023811066 valyl-tRNA synthetase 100.0
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
PTZ00419995 valyl-tRNA synthetase-like protein; Provisional 100.0
PRK05729874 valS valyl-tRNA synthetase; Reviewed 100.0
PLN02943958 aminoacyl-tRNA ligase 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
PLN02882 1159 aminoacyl-tRNA ligase 100.0
PLN02843974 isoleucyl-tRNA synthetase 100.0
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PRK13208800 valS valyl-tRNA synthetase; Reviewed 100.0
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
PLN02959 1084 aminoacyl-tRNA ligase 100.0
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
KOG0433937 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 100.0
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
PRK00390805 leuS leucyl-tRNA synthetase; Validated 100.0
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
PLN02563963 aminoacyl-tRNA ligase 100.0
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
KOG0435876 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 100.0
PRK12267648 methionyl-tRNA synthetase; Reviewed 100.0
PLN02610 801 probable methionyl-tRNA synthetase 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
KOG0437 1080 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
PLN02224616 methionine-tRNA ligase 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 100.0
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 100.0
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 100.0
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 100.0
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 100.0
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 100.0
KOG1247567 consensus Methionyl-tRNA synthetase [Translation, 100.0
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 100.0
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 100.0
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 100.0
PRK12418384 cysteinyl-tRNA synthetase; Provisional 100.0
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 100.0
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PLN02946557 cysteine-tRNA ligase 99.97
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.97
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.97
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.96
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.96
cd07961183 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of 99.95
cd00674353 LysRS_core_class_I catalytic core domain of class 99.95
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 99.93
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.91
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 99.89
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.89
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.87
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 99.86
PF13603185 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P 99.86
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.83
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.73
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 99.71
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 99.69
PRK12451562 arginyl-tRNA synthetase; Reviewed 99.67
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.63
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 99.63
PLN02286576 arginine-tRNA ligase 99.6
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 99.56
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 99.51
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 99.27
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 99.21
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.08
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.6
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 98.43
cd09287240 GluRS_non_core catalytic core domain of non-discri 97.92
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 97.79
PLN03233523 putative glutamate-tRNA ligase; Provisional 97.48
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 97.47
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 97.47
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 97.46
PTZ00402601 glutamyl-tRNA synthetase; Provisional 97.46
PLN02907722 glutamate-tRNA ligase 97.42
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 97.39
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 97.3
PLN02859788 glutamine-tRNA ligase 97.25
PRK05347554 glutaminyl-tRNA synthetase; Provisional 97.21
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 97.21
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 97.19
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 97.14
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 97.13
PRK12558445 glutamyl-tRNA synthetase; Provisional 97.12
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 97.07
PRK14703771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 97.03
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 97.02
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 96.92
cd00808239 GluRS_core catalytic core domain of discriminating 96.88
PLN02627535 glutamyl-tRNA synthetase 96.71
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 96.63
cd07956156 Anticodon_Ia_Arg Anticodon-binding domain of argin 95.74
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 95.31
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 95.18
PRK13354410 tyrosyl-tRNA synthetase; Provisional 95.0
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 94.69
PRK05912408 tyrosyl-tRNA synthetase; Validated 94.29
KOG4426656 consensus Arginyl-tRNA synthetase [Translation, ri 93.49
cd00802143 class_I_aaRS_core catalytic core domain of class I 93.22
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 92.73
KOG1195567 consensus Arginyl-tRNA synthetase [Translation, ri 92.69
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 92.54
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 91.75
PRK08560329 tyrosyl-tRNA synthetase; Validated 91.41
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 90.64
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 90.18
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 90.0
cd00808239 GluRS_core catalytic core domain of discriminating 89.53
PLN02563 963 aminoacyl-tRNA ligase 88.97
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 88.86
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 88.83
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 88.77
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 88.58
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 88.31
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 88.11
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 87.6
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 86.86
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 85.72
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 85.55
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 84.52
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 83.15
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 82.8
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 82.76
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 80.67
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=2.9e-249  Score=2136.44  Aligned_cols=883  Identities=60%  Similarity=1.031  Sum_probs=845.8

Q ss_pred             CCcCcCCCCCCCCcccccchhhhcCCCChhHHHHHHHHHHHcCCcccCCC-CCCCcEEEECCCCCCCCCCCcchhHHHHH
Q 001708          122 NAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNK-SSKPSFVIVLPPPNVTGALHIGHALTTAI  200 (1022)
Q Consensus       122 ~~~~~~~~~t~~~~k~~~~~~~~~~y~p~~vE~~w~~~W~~~~~f~~~~~-~~k~~f~i~~pPPy~nG~LHiGHal~~~i  200 (1022)
                      ++...+.++|++|+|++++.+++..|+|..||++||.||+++|+|+|+.. ...+.|+|+.||||+||.||||||++.++
T Consensus        21 ~~~~~~~~~t~~ge~k~~~~~~~~~y~p~~vE~~wy~ww~k~g~fkp~~~~~~~~~f~i~~PPPNVTG~LHiGHALt~ai  100 (995)
T KOG0432|consen   21 EEVASYVPSTAPGEKKDLSGPLPAAYSPAYVESAWYKWWEKQGFFKPEYGPNPGGVFVIPLPPPNVTGSLHIGHALTVAI  100 (995)
T ss_pred             CCcccccCCCCcchhhccCCcccccCCccchHHHHHHHHHHcCCCCcccCCCCCCcceeecCCCCcccccchhHHHHHHH
Confidence            45578899999999999999999999999999999999999999999986 34579999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeeeeeccCCccChhHHHHHHHHHHHHhCCCccccChHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 001708          201 QDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDW  280 (1022)
Q Consensus       201 ~Dii~Ry~rm~G~~Vl~~pG~D~~Glp~q~~vEk~l~~~~~~~~~~~g~e~f~~~~~~~~~~~~~~i~~ql~rlG~s~DW  280 (1022)
                      +|+++||+||+||+|+|+||+||+||+||++|||+++++.|++||++||++|+++||+|+++|+.+|.+||++||.|+||
T Consensus       101 qD~i~R~~rm~G~~vlw~PG~DHAGIATQ~VVEK~l~~~~~~~Rh~lgRe~F~~~vw~Wk~e~g~~I~~Qlk~lGas~DW  180 (995)
T KOG0432|consen  101 QDALARYNRMHGYQVLWVPGTDHAGIATQVVVEKQLAREGGKTRHDLGREEFLKEVWEWKEEYGGRIYNQLKRLGASLDW  180 (995)
T ss_pred             HHHHHHHHHhcCCeeeecCCccccchhHHHHHHHHHHHhcCcchhhcCHHHHHHHHHHHHHHhCccHHHHHHHhcCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCChhhHHHHHHHHHHHHHcCcEEEcceeeeecCCCCccccccccccccCCCceEEeecCccccccceeeEeEee
Q 001708          281 SRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAY  360 (1022)
Q Consensus       281 ~r~~~T~d~~~~~~v~~~F~~L~ekGlIyr~~~~V~W~p~~~TaLsd~EVe~~~~~~~t~~~vp~y~~~~e~g~l~~~~y  360 (1022)
                      +|++|||||..+++|.++|++||++|+|||++++|||||.++|+|||+||+++++.++|+++||||+.+|+||+|++|+|
T Consensus       181 ~re~fTmD~~~s~AV~eAFvrL~eeglIyR~~rlVNW~~~L~saiSdiEVe~~ei~~~t~l~vpGyd~~VeFG~L~~faY  260 (995)
T KOG0432|consen  181 DREAFTMDPKLSRAVTEAFVRLHEEGLIYRANRLVNWCPALRSAISDIEVESVEIPGRTLLSVPGYDTKVEFGVLYSFAY  260 (995)
T ss_pred             cHhhcccCHHHHHHHHHHHHHHHhcCceEecCceeeechhHHhhhhhheecceecCCCceEecCCCCcceeeeeeeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCcceEEEeeccccccccCcEEEEcCCccccccccCCeeecCCCCCccceEeCCccccCCCCCCceecCCCCCcchH
Q 001708          361 PLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDF  440 (1022)
Q Consensus       361 ~l~~~~~~l~v~TTrPeTl~g~~avaV~P~d~ry~~L~G~~~~~P~~~~~~pIi~~~~~V~~~~GTG~V~~~PaH~~~Dy  440 (1022)
                      +++|+++.|+|+|||||||+||+||||||+|+||+||+|+++.|||+++.+|||+|.+ |||+||||+||||||||++||
T Consensus       261 ~v~gs~~~i~VaTTRpET~lGDvAvAVhP~D~RYk~lhGk~~~hP~~~r~lPiI~D~~-Vd~~fGTGaVKITPaHd~nDy  339 (995)
T KOG0432|consen  261 PVEGSDEEIVVATTRPETILGDVAVAVHPDDDRYKHLHGKFVKHPFTGRKLPIICDIA-VDMEFGTGAVKITPAHDPNDY  339 (995)
T ss_pred             eccCCCCeEEEecCCccccccceeEEeCCCCcccccccCceeecCCCCCccceeeccc-ccccccccceEecCCCChhHH
Confidence            9999999999999999999999999999999999999999999999999999999985 999999999999999999999


Q ss_pred             HHHHHcCCceeeeeCCCCccccCCCCCCCCCChhhHHHHHHHHHHHcCCccccccccccccccccCCCceecccccccce
Q 001708          441 DVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYV  520 (1022)
Q Consensus       441 ~~~~~~~L~~i~iid~~G~~~e~~g~~f~G~~~~~ar~~vi~~L~~~gll~~~~~~~~~~p~c~Rs~~~i~~~~~~QWFi  520 (1022)
                      ++|+||||+++|||++||.++..|| +|+||+||+||++|++.|++.||+++.++|+|++|+|+||||+|||+++|||||
T Consensus       340 EvgkRh~L~~~ni~~~dG~l~~~~g-ef~Gm~RFeAR~kvv~~L~e~gL~~g~~~h~mvlpiCSRsgDVIEpllkpQW~v  418 (995)
T KOG0432|consen  340 EVGKRHNLEFINIFTDDGLLNNVCG-EFKGMKRFEAREKVVEKLKELGLYVGKENHPMVLPICSRSGDVIEPLLKPQWFV  418 (995)
T ss_pred             HHHHhcCCCceeEEcCCCceeccch-hccCcHHHHHHHHHHHHHHHhhhhhccCCCceeccccCCCCCcccccccchhee
Confidence            9999999999999999999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             echHHHHHHHHhhhccCCCceEEeccccHHHHHHHHhhccCccceeccCCCCccCcceeccCchhhhccCCCCcceEEec
Q 001708          521 NCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVAR  600 (1022)
Q Consensus       521 ~~~~l~~~al~~v~~~~~~~i~~~P~~~~~~~~~wl~~l~DWcISRQ~~WG~pIP~~~~~~~~~~~~~~~~~~~~w~~~~  600 (1022)
                      +|++|+++|+++|   ++|++++.|+.++++|.+|++|++|||||||+||||+||+|++..+++     ....++|++++
T Consensus       419 ~c~ema~~A~~av---~sG~L~i~P~~~~k~w~~W~~~i~DWCiSRQLWWGHrIPAy~v~~~~~-----~~ee~~Wvvar  490 (995)
T KOG0432|consen  419 SCKEMAKKALKAV---ESGKLEILPEFHEKEWYRWLENIRDWCISRQLWWGHRIPAYFVNLSDG-----RAEEDYWVVAR  490 (995)
T ss_pred             ehHHHHHHHHHHH---hcCCeEECchHHHHHHHHHHhhccccchhhhhhhccccceeeeecccC-----CCccceeEEeC
Confidence            9999999999999   999999999999999999999999999999999999999999976532     23456999999


Q ss_pred             CHHHHHHHHhhhc-CCCCcccccCCCcEEEEeccCccccccccCCCCChhhhhcCCcCcccccccccchHHHHHHHHHhh
Q 001708          601 DEKEALAVANKKF-SGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIK  679 (1022)
Q Consensus       601 ~~~ea~~~~~~~~-~~~~~~~~~d~DvlDtWFdSgl~p~s~lg~p~~~~d~~~~~P~dl~~~G~Dil~fW~a~m~~~~~~  679 (1022)
                      ++++|++++..++ |+..++++||+||||||||||+||||++|||++++||..|||.++++||+||+||||+||+|+|+.
T Consensus       491 seeeA~ekaa~k~g~~~~~~L~qDpDVLDTWFSS~L~PfS~lGWP~~t~d~~~fyP~sllETG~DILfFWVaRMvmLg~k  570 (995)
T KOG0432|consen  491 SEEEAREKAAEKFGPGKEFTLEQDPDVLDTWFSSGLWPFSTLGWPEETKDFKNFYPLSLLETGHDILFFWVARMVMLGLK  570 (995)
T ss_pred             CHHHHHHHHHHHhCCcccceeecCccHHHhhhhcccccchhcCCccccccHHhcCCchhhhcCchHHHHHHHHHHHhhhh
Confidence            9999999999999 788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEeccceeCCCCccceecCCcccCcchhhccccchhHHHhhhcCCCChHHHHHHHhcccCCCCCCCCCCCc
Q 001708          680 LGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGT  759 (1022)
Q Consensus       680 l~~~~Pfk~V~~Hg~v~D~~GrKMSKSlGNvIdP~dvI~g~~l~~l~~~l~~~nl~~~e~~~a~~~~~~~~~~~i~~~Ga  759 (1022)
                      |+|++||++|++||+|||.+|||||||+||||||+|||+|++||+||++|++|||||+|+++|++||+++||||||+||+
T Consensus       571 LtG~lPF~~V~LH~mVRDa~GRKMSKSLGNVIDPlDVI~Gisle~L~~~L~~gNLdp~Ev~~a~~gq~kdFPnGIpeCGt  650 (995)
T KOG0432|consen  571 LTGELPFKEVLLHGLVRDAHGRKMSKSLGNVIDPLDVIDGISLEKLHAKLLSGNLDPREVEKAKKGQKKDFPNGIPECGT  650 (995)
T ss_pred             hcCCCCchheeechhhccccccccchhhccccCHHHHhccccHHHHHHHHHcCCCCHHHHHHHHHHHHhhcCCCCcccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhccCCCcccccchhhhHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHH
Q 001708          760 DALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLP-FSCKWILSVLNKAISRTA  838 (1022)
Q Consensus       760 DaLR~~L~~~~~~~~Dinf~~~~~~~~r~f~nkl~N~~rf~l~~l~~~~~p~~~~~~~~~~-~~D~wil~~L~~~~~~v~  838 (1022)
                      |||||+||+++.+++|||+|++++++||+|||||||++||+++.++++|.|.........+ ..|+||++||+.+++.|+
T Consensus       651 DALRFaL~s~~~~~~dInLDv~rv~g~r~FcNKlWNa~rF~l~~lg~~~~p~~~~~~~~~~~~~d~WIlsrL~~av~~~~  730 (995)
T KOG0432|consen  651 DALRFALCSYTTQGRDINLDVLRVEGYRHFCNKLWNATRFALQRLGENFVPSPTEDLSGNESLVDEWILSRLAEAVEEVN  730 (995)
T ss_pred             HHHHHHHHHccccCccccccHHHHhhHHHHHHHHHHHHHHHHHhcccCCCCCcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998889887654444333 399999999999999999


Q ss_pred             hhhhcCCHHHHHHHHHHHHHhhhhHHHHHhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHhCC
Q 001708          839 SSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLP  918 (1022)
Q Consensus       839 ~a~e~~~f~~a~~~i~~f~~~~l~~~Yle~~K~~l~~~~~~~~~~r~~a~~~L~~~L~~~l~LL~PfmPfitEelwq~L~  918 (1022)
                      ++|+.|+|+.|++++++||+++|||+|+|.+||.+++++..   .+..|..||+.||+.+|+||||||||+||||||+||
T Consensus       731 ~~~~~~~f~~at~a~~~Fwl~~lCDVYlE~~Kp~l~~~~~~---~~~~a~~vL~~~ld~gLrll~PfMPFvtEel~qrlP  807 (995)
T KOG0432|consen  731 ESLEARNFHLATSALYAFWLYDLCDVYLEATKPLLWGDSEA---LAYEARRVLYRCLDNGLRLLHPFMPFITEELWQRLP  807 (995)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCcHH---HHHHHHHHHHHHHHHHHHHhcCcccccHHHHHHhcc
Confidence            99999999999999999999999999999999999987644   678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCC--CcceEEEEecCchhHHHHHHHHH
Q 001708          919 QPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKN--ERLPAIAFCQTKGVSEIIRSHEL  996 (1022)
Q Consensus       919 ~~~~~~~~~SI~~~~~P~~~~~~~~~~~e~~~~~v~~iv~~iRslr~~~~~k~i~--~~~~v~i~~~~~~~~~~l~~~~~  996 (1022)
                      .+.+ ....||+.++||...+.|.|+++|.+|+.+++++..+|++|+.|   +++  .+..+++..+++....+++.+.+
T Consensus       808 ~r~~-~~~~si~va~yP~~~~~~~~~e~E~~~~~v~~i~~~iRslra~y---~l~~~~~~~v~~~~s~~~~~~~~~~~~~  883 (995)
T KOG0432|consen  808 RRKG-SKPASISVSPYPSSNELWRNEELESAFELVLAITRAIRSLRAEY---NLSPKPRGSVFIASSDEEDKSILKEFLD  883 (995)
T ss_pred             cCCC-CCCCceEecCCCchhcccCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCceEEEEecCCCcchhHHHHHHH
Confidence            8765 35679999999988889999999999999999999999999999   874  35667777776666678899999


Q ss_pred             HHHHhhccCcEEEecCCC-CCCCCcc
Q 001708          997 EIVTLSTSSSLKALSFGL-LPLKIVV 1021 (1022)
Q Consensus       997 ~I~~L~~v~~v~i~~~~~-~p~~~~~ 1021 (1022)
                      .|.++.+++.|.++.+++ .|.||+.
T Consensus       884 ~i~~l~~~~~v~i~~~~~~~~~g~~~  909 (995)
T KOG0432|consen  884 EISTLTNLELVSISSPAEEDAQGCAL  909 (995)
T ss_pred             HHHHhhccceeEeccCCccccCcceE
Confidence            999999999999998877 7899985

>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1022
1gax_A862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 1e-167
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 7e-45
1qu2_A917 Insights Into Editing From An Ile-Trna Synthetase S 1e-43
1wz2_A967 The Crystal Structure Of Leucyl-Trna Synthetase And 7e-27
1wk9_A146 Structural Basis For Non-Cognate Amino Acid Discrim 1e-23
1wka_A147 Structural Basis For Non-Cognate Amino Acid Discrim 1e-23
1wkb_A810 Crystal Structure Of Leucyl-Trna Synthetase From Th 4e-23
2v0c_A878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 9e-22
1obh_A878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 1e-21
4aq7_A880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 6e-18
3ziu_A637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 8e-11
3ziu_A637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 3e-05
4dlp_A536 Crystal Structure Of Methionyl-Trna Synthetase Metr 4e-09
2csx_A497 Crystal Structure Of Aquifex Aeolicus Methionyl-Trn 5e-06
2csx_A497 Crystal Structure Of Aquifex Aeolicus Methionyl-Trn 2e-05
3o0a_A219 Crystal Structure Of The Wild Type Cp1 Hydrolitic D 7e-06
3pz5_A201 The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2 1e-05
3pz0_A221 The Crystal Structure Of Aaleurs-Cp1 Length = 221 1e-05
2x1l_A524 Crystal Structure Of Mycobacterium Smegmatis Methio 2e-04
2d54_A502 Crystal Structure Of Methionyl Trna Synthetase Y225 2e-04
1woy_A500 Crystal Structure Of Methionyl Trna Synthetase Y225 3e-04
1woy_A500 Crystal Structure Of Methionyl Trna Synthetase Y225 4e-04
1a8h_A500 Methionyl-Trna Synthetase From Thermus Thermophilus 3e-04
1a8h_A500 Methionyl-Trna Synthetase From Thermus Thermophilus 3e-04
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure 
Iteration: 1

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 341/826 (41%), Positives = 463/826 (56%), Gaps = 93/826 (11%)
Query: 143 MAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQD 202
           + K Y+P SVE  W   W  +  F+A+ KS KP FVI +PPPNVTG+LH+GHAL  ++QD
Sbjct: 3   LPKAYDPKSVEPKWAEKWAKNP-FVANPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQD 61
Query: 203 TIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDE 262
            +IR++RM G+ A+W+PG DHAGIATQVVVE+ L++E K TRHD+GRE+F+  VW+WK+E
Sbjct: 62  ALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGK-TRHDLGREKFLERVWQWKEE 120
Query: 263 YGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLR 322
            GGTIL+Q +RLGAS DWSRE FTMDEKRS+AV  AF R Y EGL YR  RLVNW     
Sbjct: 121 SGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCE 180
Query: 323 TAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGD 382
           T +SD+EV+    P                G L +  Y +EGG G I +AT R ET+  D
Sbjct: 181 TTLSDLEVETEPTP----------------GKLYTLRYEVEGG-GFIEIATVRPETVFAD 223
Query: 383 TAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDV 442
            AIA+HPED RY HL GK A  P     IPI+ D   V+  FGTGA+K+TPAHDP D+++
Sbjct: 224 QAIAVHPEDERYRHLLGKRARIPLTEVWIPILADPA-VEKDFGTGALKVTPAHDPLDYEI 282
Query: 443 GKRHNLEFINIFTDDGKINSNGGLE-FEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLG 501
           G+RH L+ +++   +G++      E   G+ RF+AR    E  ++ G     +D  + L 
Sbjct: 283 GERHGLKPVSVINLEGRMEGERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALA 342
Query: 502 LCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRD 561
            CSR    +E  I PQW++    +A E L  +   D   +  +P ++      WLE ++D
Sbjct: 343 TCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGD---IAFVPERWKKVNMDWLENVKD 399
Query: 562 WCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMC 621
           W +SRQLWWGHQIPAWY        ++  + N    V R E+      + +  G    + 
Sbjct: 400 WNISRQLWWGHQIPAWYC-------EDCQAVN----VPRPERYLEDPTSCEACGSP-RLK 447
Query: 622 QDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLG 681
           +D DV DTWFSS L+PLS LGWP++T+DLKAFYP  VL TG+DILF WV+RM + G    
Sbjct: 448 RDEDVFDTWFSSALWPLSTLGWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFM 507
Query: 682 GEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEV 741
           GE PF  V LH ++ D  G+KMSKS GNVIDPLE++                        
Sbjct: 508 GERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVE----------------------- 544
Query: 742 AKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSM 801
                           G DALRFAL+        I LD++ +   R + NKL+NA RF +
Sbjct: 545 --------------RYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVL 590
Query: 802 SKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQF 861
               EGF    +        + +++ S L++ +    +   + + + AA  VY     +F
Sbjct: 591 LS-REGF----QAKEDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEF 645
Query: 862 CDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPK 921
           CD ++EA KP     N   A      + VL V     L+LLHP MPF+T EL+Q L    
Sbjct: 646 CDWYLEAAKPALKAGN---AHTLRTLEEVLAVL----LKLLHPMMPFLTSELYQAL---- 694
Query: 922 GCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEV 967
               KE + L  +P    G  DE AE   + ++  V  +R+L+AE 
Sbjct: 695 --TGKEELALEAWPEP--GGRDEEAERAFEALKQAVTAVRALKAEA 736
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1WK9|A Chain A, Structural Basis For Non-Cognate Amino Acid Discrimination By The Valyl-Trna Synthetase Editing Domain Length = 146 Back     alignment and structure
>pdb|1WKA|A Chain A, Structural Basis For Non-Cognate Amino Acid Discrimination By The Valyl-Trna Synthetase Editing Domain Length = 147 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure
>pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate In The Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3- Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The Editing Site Length = 878 Back     alignment and structure
>pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Pre-Transfer Editing Substrate Analogue In Both Synthetic Active Site And Editing Site Length = 878 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|4DLP|A Chain A, Crystal Structure Of Methionyl-Trna Synthetase Metrs From Brucella Melitensis Bound To Selenomethionine Length = 536 Back     alignment and structure
>pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) Length = 497 Back     alignment and structure
>pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) Length = 497 Back     alignment and structure
>pdb|3O0A|A Chain A, Crystal Structure Of The Wild Type Cp1 Hydrolitic Domain From Aquifex Aeolicus Leucyl-Trna Length = 219 Back     alignment and structure
>pdb|3PZ5|A Chain A, The Crystal Structure Of Aaleurs-Cp1-D20 Length = 201 Back     alignment and structure
>pdb|3PZ0|A Chain A, The Crystal Structure Of Aaleurs-Cp1 Length = 221 Back     alignment and structure
>pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine Length = 524 Back     alignment and structure
>pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a Mutant From Thermus Thermophilus Length = 502 Back     alignment and structure
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus Length = 500 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1022
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 0.0
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 1e-146
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 1e-121
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 4e-95
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 2e-72
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 1e-71
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 3e-38
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 1e-07
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 3e-33
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 1e-09
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 4e-18
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 1e-09
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 2e-17
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 2e-17
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 4e-09
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 3e-17
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 5e-09
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 1e-15
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 3e-15
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 2e-08
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 8e-13
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 2e-09
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 9e-13
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 8e-08
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 9e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 3e-10
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 1e-09
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 7e-09
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 9e-06
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 4e-05
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 5e-05
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
 Score = 1111 bits (2875), Expect = 0.0
 Identities = 339/868 (39%), Positives = 463/868 (53%), Gaps = 98/868 (11%)

Query: 143  MAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQD 202
            + K Y+P SVE  W   W  + +  A+ KS KP FVI +PPPNVTG+LH+GHAL  ++QD
Sbjct: 3    LPKAYDPKSVEPKWAEKWAKNPFV-ANPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQD 61

Query: 203  TIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDE 262
             +IR++RM G+ A+W+PG DHAGIATQVVVE+ L  +   TRHD+GRE+F+  VW+WK+E
Sbjct: 62   ALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLL-LKEGKTRHDLGREKFLERVWQWKEE 120

Query: 263  YGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLR 322
             GGTIL+Q +RLGAS DWSRE FTMDEKRS+AV  AF R Y EGL YR  RLVNW     
Sbjct: 121  SGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCE 180

Query: 323  TAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGD 382
            T +SD+EV+    P                G L +  Y +EGG G I +AT R ET+  D
Sbjct: 181  TTLSDLEVETEPTP----------------GKLYTLRYEVEGG-GFIEIATVRPETVFAD 223

Query: 383  TAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDV 442
             AIA+HPED RY HL GK A  P     IPI+ D   V+  FGTGA+K+TPAHDP D+++
Sbjct: 224  QAIAVHPEDERYRHLLGKRARIPLTEVWIPILADP-AVEKDFGTGALKVTPAHDPLDYEI 282

Query: 443  GKRHNLEFINIFTDDGKINSNG-GLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLG 501
            G+RH L+ +++   +G++          G+ RF+AR    E  ++ G     +D  + L 
Sbjct: 283  GERHGLKPVSVINLEGRMEGERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALA 342

Query: 502  LCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRD 561
             CSR    +E  I PQW++    +A E L  +   D   +  +P ++      WLE ++D
Sbjct: 343  TCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGD---IAFVPERWKKVNMDWLENVKD 399

Query: 562  WCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMC 621
            W +SRQLWWGHQIPAWY                   V R E+      + +  G    + 
Sbjct: 400  WNISRQLWWGHQIPAWY-----------CEDCQAVNVPRPERYLEDPTSCEACGSP-RLK 447

Query: 622  QDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLG 681
            +D DV DTWFSS L+PLS LGWP++T+DLKAFYP  VL TG+DILF WV+RM + G    
Sbjct: 448  RDEDVFDTWFSSALWPLSTLGWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFM 507

Query: 682  GEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEV 741
            GE PF  V LH ++ D  G+KMSKS GNVIDPLE++                        
Sbjct: 508  GERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVE----------------------- 544

Query: 742  AKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSM 801
                            G DALRFAL+        I LD++ +   R + NKL+NA RF +
Sbjct: 545  --------------RYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVL 590

Query: 802  SKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQF 861
                EGF             + +++ S L++ +    +   + + + AA  VY     +F
Sbjct: 591  LSR-EGFQAK----EDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEF 645

Query: 862  CDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPK 921
            CD ++EA KP     N       +     L   L   L+LLHP MPF+T EL+Q L    
Sbjct: 646  CDWYLEAAKPALKAGN-------AHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALTG-- 696

Query: 922  GCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAF 981
                KE + L  +P    G  DE AE   + ++  V  +R+L+AE  G    + +     
Sbjct: 697  ----KEELALEAWPEP--GGRDEEAERAFEALKQAVTAVRALKAE-AGLPPAQEVRVYL- 748

Query: 982  CQTKGVSEIIRSHELEIVTLSTSSSLKA 1009
               +G +  +  +      LS +  L  
Sbjct: 749  ---EGETAPVEENLEVFRFLSRADLLPE 773
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Length = 147 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Length = 196 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Length = 219 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Length = 261 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Length = 252 Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Length = 311 Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Length = 186 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1022
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 6e-59
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 2e-11
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 3e-56
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 7e-47
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 1e-42
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 1e-38
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 8e-39
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 2e-35
d1wkaa1143 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) 9e-27
d1ilea1180 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (Il 2e-25
d1ffya2194 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (Il 2e-23
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 7e-23
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 6e-06
d1h3na2192 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS 7e-21
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 7e-20
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 7e-13
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 1e-16
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 2e-08
d1udza_179 b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {T 2e-13
d1ffya1273 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (Il 4e-13
d1ivsa2218 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) 9e-13
d1h3na1128 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS 9e-12
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 4e-08
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 1e-04
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 1e-07
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 1e-05
d1pfva1162 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (Me 0.001
d1f7ua2348 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR 0.001
d1iq0a2370 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS 0.001
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Leucyl-tRNA synthetase (LeuRS)
species: Thermus thermophilus [TaxId: 274]

 Score =  208 bits (530), Expect = 6e-59
 Identities = 78/575 (13%), Positives = 144/575 (25%), Gaps = 116/575 (20%)

Query: 145 KEYNPSSVEKSWYSWWENSGYFIA-DNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDT 203
           ++YNP ++E  W  +WE  G+  A D    +    +++  P  +G LH+GH     + D 
Sbjct: 2   EKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDV 61

Query: 204 IIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEY 263
           + R+RRM GY  L   G D  G+  +    K  +                     W    
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGV-----------------HPKDWTYAN 104

Query: 264 GGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRT 323
                   R +G   DW RE  T + +  +     F++++++GL YR   LVNW    +T
Sbjct: 105 IRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQT 164

Query: 324 AISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDT 383
            +++ +V          R     +  VE   L  +   +                    T
Sbjct: 165 VLANEQVVE-------GRCWRHEDTPVEKRELEQWYLRI--------------------T 197

Query: 384 AIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVG 443
           A A             +            +    I    +       I   H      V 
Sbjct: 198 AYAERLLKDLEGLNWPEKVKAMQRAWIGRLRDWLI---SRQRYWGTPIPMVHCEACGVVP 254

Query: 444 KRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLC 503
                  + +       +          P     E       K G               
Sbjct: 255 VPEEELPVLLPDLKDVEDIRPK---GKSPLEAHPEFYETTCPKCG--------------- 296

Query: 504 SRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWC 563
                  +      ++ +                                   +A     
Sbjct: 297 --GPAKRDTDTMDTFFDSSWYYLRYTDPHNDR---------------LPFDPEKANAWMP 339

Query: 564 VSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQD 623
           V + +                           +         +    + F   +    Q 
Sbjct: 340 VDQYIGGVEHAVLHL-------------LYSRFFTKFLHDLGMVKVEEPF---QGLFTQG 383

Query: 624 PDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGE 683
             +  T F       SV+  P+ T        +++       +   +             
Sbjct: 384 MVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAEL------------- 430

Query: 684 VPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVIN 718
               + +    +       MSKS GN +     + 
Sbjct: 431 ----RPHEDGTLHLWKPAVMSKSKGNGVMVGPFVK 461
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 143 Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 180 Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 179 Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 273 Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 218 Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 128 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 162 Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1022
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 100.0
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 100.0
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 100.0
d1wkaa1143 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1ivsa2218 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1ilea1180 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ffya1273 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1ffya2194 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.98
d1udza_179 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.98
d1h3na2192 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.97
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.97
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.83
d1h3na1128 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.77
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.51
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 99.4
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.18
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.07
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.97
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 98.1
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 97.8
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 97.74
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 97.08
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 96.32
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 95.77
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 94.76
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 94.41
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 92.42
d2ts1a_319 Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearoth 92.37
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 90.65
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 84.0
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 83.45
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=0  Score=780.32  Aligned_cols=433  Identities=22%  Similarity=0.386  Sum_probs=371.9

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf             67678999997455343232118997368899999999839864578--9999928997799987998886146799999
Q 001708          124 EEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADN--KSSKPSFVIVLPPPNVTGALHIGHALTTAIQ  201 (1022)
Q Consensus       124 ~~~~~~~t~~~~k~~~~~~~~~~y~p~~vE~~w~~~W~~~~~f~~~~--~~~k~~f~i~~pPPy~nG~LHiGHal~~~i~  201 (1022)
                      ..+.+|+|.|++|.|+          ..+|++||++|+++++|++..  ++++++|+|++|||||||.||||||++++++
T Consensus         5 ~tl~lp~t~f~~~~~~----------~~~E~~~~~~W~~~~~~~~~~~~~~~~~~f~~~~~pPy~nG~lHiGH~~~~~~~   74 (450)
T d1ffya3           5 KTLLMPKTDFPMRGGL----------PNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGNLHMGHALNKILK   74 (450)
T ss_dssp             GGSCCCCCCCCSSCCH----------HHHHHHHHHHHHHTTHHHHHHHHTTTSCBCCEECCCCBSSSCCCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCH----------HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf             0217878999777886----------788999999998779811421025899838996389898885236688999999


Q ss_pred             HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99999988489944440457964804999999998997078743349588999999999999999999998765412357
Q 001708          202 DTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWS  281 (1022)
Q Consensus       202 Dii~Ry~rm~G~~Vl~~~G~D~~Glp~q~~vEk~l~~~~~~~~~~~~re~f~~~~~~~~~~~~~~i~~ql~~lG~s~DW~  281 (1022)
                      |+++||+||+|++|+|++||||||+|||..+++     .+..+.++++++|.+.|++|+.++++.++.+|++||+++||+
T Consensus        75 Dv~~Ry~rm~G~~V~~~~G~D~~G~pie~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~D~~  149 (450)
T d1ffya3          75 DFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTK-----KGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFN  149 (450)
T ss_dssp             HHHHHHHHTTTCBCCCCCEEBCCSHHHHHHHHH-----HTCCSTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCTT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH-----HCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999994699131024302477299998875-----088611014898854120013332234788998876530132


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEE
Q ss_conf             83036983569999999999987596899156332138999323543212335777407830576543100026757432
Q 001708          282 RECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYP  361 (1022)
Q Consensus       282 r~~~T~d~~~~~~v~~~F~~L~e~GlIyr~~~~V~Wc~~~~TaLsd~EVe~~~~~~~t~~~vp~y~~~~e~g~l~~~~y~  361 (1022)
                      ++|+|||+.|.++|+++|.+|+++|+|||+.++|+|||.|+|++++.|++                              
T Consensus       150 ~~~~T~~~~~~~~v~~~f~~l~~~G~iy~~~~~v~~~p~~~~~~~~~e~~------------------------------  199 (450)
T d1ffya3         150 DPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIE------------------------------  199 (450)
T ss_dssp             SCEETTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECCGGGEE------------------------------
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCC------------------------------
T ss_conf             11123208999999999999997698002345453322558642234311------------------------------


Q ss_pred             CCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCHHH
Q ss_conf             27986149996455542345727997689611112248765368899820057278633687899830118999965489
Q 001708          362 LEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFD  441 (1022)
Q Consensus       362 l~~~~~~lvv~TTrPeTl~g~taiaV~p~d~ry~~L~G~~~~~P~~~r~ipIi~~~~~Vd~~~GTG~V~~~PaHd~~Dy~  441 (1022)
                                                                                                      
T Consensus       200 --------------------------------------------------------------------------------  199 (450)
T d1ffya3         200 --------------------------------------------------------------------------------  199 (450)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE
Q ss_conf             99880995012317999203689988899776657999999999859822322465544410259981001444432100
Q 001708          442 VGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVN  521 (1022)
Q Consensus       442 ~~~~~~L~~i~ii~~dG~~~e~~g~~f~G~~~~~ar~~Vi~~L~~~gl~~~~~~~~~~~p~c~Rs~~~i~~~~~~QWfi~  521 (1022)
                                                                                +|.|+||+.+++++.++|||++
T Consensus       200 ----------------------------------------------------------~~~~~r~~~~~~~~~~~qwf~~  221 (450)
T d1ffya3         200 ----------------------------------------------------------YPHDWRTKKPVIFRATPQWFAS  221 (450)
T ss_dssp             ----------------------------------------------------------EEEETTTCCBCEEEEEEEEEEC
T ss_pred             ----------------------------------------------------------CCCCCCCCCCCEEECCCCCEEC
T ss_conf             ----------------------------------------------------------1223335677443225542001


Q ss_pred             CHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCEECCCCHHHHC-CCCCCCCEEEEC
Q ss_conf             4078999998510147996088360208999999840468201000588886572000367301100-588886237806
Q 001708          522 CNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKE-LGSYNDHWIVAR  600 (1022)
Q Consensus       522 ~~~~~~~al~~v~~~~~~~i~~~P~~~~~~~~~wl~~l~DWcISRQr~WG~pIP~~~~~~~~~~~~~-~~~~~~~w~~~~  600 (1022)
                      +..+++.+++++     ..+.+.|+..+.++..|+++++||||||||+||+|||+|++..+...... .......+....
T Consensus       222 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dw~iSRqr~WG~piP~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (450)
T d1ffya3         222 ISKVRQDILDAI-----ENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEH  296 (450)
T ss_dssp             HHHHHHHHHHHH-----HTSEESSHHHHHHHHHHHHHCCCEECEESCSSSCBCCCEECTTSCEECCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHC-----CCCCCCCCCCCEEEECCCCCCCCHHEEEECCCCCCCCEEECCCCCEECCHHHHHHHHHHHHHC
T ss_conf             121212001101-----122124553201231013675300001100015676435437898733511367787765532


Q ss_pred             -C----HHHHHHHHHHH---CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf             -7----78899998552---499875433479718887336863100026999981444207867321000201119999
Q 001708          601 -D----EKEALAVANKK---FSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVAR  672 (1022)
Q Consensus       601 -~----~~ea~~~~~~~---~~~~~~~~~~~~dvlDtWFdSgl~p~s~~~~p~~~~d~~~~~P~dl~~~G~Dil~fW~~~  672 (1022)
                       .    ..+........   ++.....+.+++||+||||||++++++.++++.     ..+||+|++++|+||+|||+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvld~wfds~~~~~~~~~~~~-----~~~~P~d~~~~G~Di~r~w~~~  371 (450)
T d1ffya3         297 GSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRP-----ELSFPADMYLEGSDQYRGWFNS  371 (450)
T ss_dssp             CTHHHHHSCHHHHSSTTCCCSSCTTSCCEECCCEECHHHHHHTHHHHTTTTST-----TCCSSBSEEEEEGGGGTTHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHHH
T ss_conf             76433456400024542113589987521441331134565556421113334-----4467875434575123079999


Q ss_pred             HHHHHHHHCCCCCCEEEEECCCEECCCCCCCEECCCCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             99999542599986089966603388995100038950291012115660457776430999937799987114678999
Q 001708          673 MVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPN  752 (1022)
Q Consensus       673 ~~~~~~~l~~~~Pfk~V~~Hg~v~D~~G~KMSKS~GNvIdP~diI~g~~l~~l~~~l~~~nl~~~e~~~a~~~q~~~f~~  752 (1022)
                      |++.++.+.|+.||++|++||||+|.+|+|||||+||+|+|.|+|+                                  
T Consensus       372 ~~~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GN~I~p~dii~----------------------------------  417 (450)
T d1ffya3         372 SITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVK----------------------------------  417 (450)
T ss_dssp             HHHHHHHHHSSCSBSEEEEECCEECTTSCCCCSSSSCCCCHHHHHH----------------------------------
T ss_pred             HHHHHHHHCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCHHHHHH----------------------------------
T ss_conf             9999999649987506787360899988887788999859899998----------------------------------


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             98877923788999743687754343045569789
Q 001708          753 GIPECGTDALRFALVSYTAQSDKINLDIQRVVGYR  787 (1022)
Q Consensus       753 gi~~~GaDaLR~~L~s~~~~~~Dinf~~~~i~~~r  787 (1022)
                         +||+|+|||||++ ++.++|++|+.+.++..+
T Consensus       418 ---~yGaDalR~~l~s-~~~~~D~~fs~~~l~~~~  448 (450)
T d1ffya3         418 ---QKGADIARLWVSS-TDYLADVRISDEILKQTS  448 (450)
T ss_dssp             ---HTCHHHHHHHHHT-SCTTSCEECCHHHHHHHH
T ss_pred             ---HHCCHHHHHHHHC-CCCCCCCCCCHHHHHHHH
T ss_conf             ---8194899999970-998878674999999864
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure