Citrus Sinensis ID: 001713

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020-
MGWFRASSGVAKLAIRRTLSQGCSYTTRAQVFPSRSRCFHSTVLKSKAQSAPVPRPVPLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIGNPF
cccccccccccHHHHccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHHHHccccccHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHccccHHHHHHcccccccccccccccccccccccccccccEEEcccccEEEEEEEcccccccccccEEEEEEEEHHHHccccccccEEEEEEEHHHHccccHHHHHHHccccccccccccEEEEEEccccccccccccccccccHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEccccccccccccccEEEEEcccccEEEcccccccccccccEEEEcccHHHHHHHHHcccccccccccEEEEcccccccccccEEEEEcccccHHHHHccccccEEEcccccccccccccccHHHHHHHcccccccccccccHHHHHccccccEEEEEcccHHHHHHHHHHHcccccccccEEEccccccccccccccHHccccccccccccccccccEEccccccccccccccccEEEEcccHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHccccccEEEEccccccccccccHHHHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccc
ccHEEcHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHcHHHHccccccccccHcccccHcccccHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHccccHHHcccEEEcccEEcccHHHcccccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHcccHHHHHHHHccccccHHHcccccccccEEEccccccccccccccEEEEEEEEccccEEEEccEEEEEEEEEEcccccccccEEEEEEEEccHHHHcccEHHHHHcccccccccccEEEEEEEEccccEccccccccccccccHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEccccccccEcccEEEEEEcccccEEEEHHHcccccccccEEEEcccccHHHHHHHHHcccccccccEEEEEHcccccccccEEEEEHHHccHHHHHHHHccHEEEccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHccEEEccccHHHHHHHHHHHHHHcccccEEEEccHHHcccHHHHccHHHHHccccccccccccccccEccccccHHcccHHHcEEEEEEccHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHccccEEEEEcccccccccHHcccHHHHHHHHHHccccccccEEccccccccHHHcHHHHHHHHHHHHHHHHHccccccccc
MGWFRASSGVAKLAIRRTLsqgcsyttraqvfpsrsrcfhstvlkskaqsapvprpvplsrltdnfldgtSSVYLEELQRsweadpnsvdESWQNFFRNFVGqaatspgisgqTIQESMRLLLLVRAYQVnghmkakldplgleereipddldpafygfteadldrEFFLGVWSmagflsenrpvQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWlrdkietptpmqynRQRREVILDRLVWSTQFENFLATKWTtakrfgleggetlIPGMKEMFDRAADLGVEsivigmphrgrlnvlgnvvrkpLRQIFsefsggtrpvdevglytgtgdvkyhlgtsydrptrggkrihlslvanpshleavdpvvigKTRAkqyysndmdrtKNMAVLIHgdgsfagqGVVYETLHlsalpnysiggtIHIVVNNqvafttdpmsgrssqyCTDVAKaldapifhvngddmEAVAHVCELAAEWRQTFHSDVVVDLVCYrrfghneidepsftqpkmykiirshpsslEIYQNKLLECQHVTQEDINKIQEKVNRILSEEfvaskdyvpnrrDWLSAYwsgfkspeqlsrirntgvkpEILKNVGKAIttlpenfkphrgvKKVYELRAQMIETGEGIDWALGEALAFATLLVEgnhvrlsgqdvergtfshrhsvlhdqetgeqycpldhvmmnqdaemftvsnsslsefgVLGFElgysmenpnsLVMWEAQfgdfangaQVIFDQFVNSGESKWLRQSGLVvmlphgydgqgpehsSARLERFLQmsddnpyvipemdSTLRTQIQECNWqivnvttpanYFHVLRRQIHREfrkplvvmspknllrhkecksnlsefddvqghpgfdkqGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERkkhsasdiaicrveqlcpfpyDLVQRELkrypnaevvwsqeepmnmgaytYIAPRLCTAMKAVDRGTMEDIkyvgrapsaasatgFYQVHVKEQSELMQkaiqpepignpf
mgwfrassgVAKLAIRRTLSQGCSyttraqvfpsrsrCFHSTvlkskaqsapvprpvplsrltdnfLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIEtptpmqynrqrREVILDRLVWSTQFENflatkwttakrfGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIfsefsggtrpvdeVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSlvanpshleavdpvvigKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGhneidepsftqpkMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEefvaskdyvpnrRDWLSAYWsgfkspeqlsrirntgvkpeILKNVGKaittlpenfkphrgvKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREfrkplvvmspknlLRHKECKSNlsefddvqghpgfdkQGTRFKRLIkdqnehsdleegirRLILCSGKVYYELYEERkkhsasdiaICRVEQLCPFPYDLVQRELKRYPNAevvwsqeepmnMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELmqkaiqpepignpf
MGWFRASSGVAKLAIRRTLSQGCSYTTRAQVFPSRSRCFHSTVLKSKAQSAPVPRPVPLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIGNPF
********GVAKLAIRRTLSQGCSYTTRAQVFPSRSRCFHSTV*******************TDNFLDGTSSVYLEELQRSWEA***SVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGY**********************PYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLR***************************************LEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHV********************
***F***********************************************************DNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGI**QTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPT***YNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVA*KD*******W****WS************NTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIG***
*********VAKLAIRRTLSQGCSYTTRAQVFPSRSRCFHST***********PRPVPLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIGNPF
*GWFRASSGVAKLAIRR*****************************************L*RLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPI****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGWFRASSGVAKLAIRRTLSQGCSYTTRAQVFPSRSRCFHSTVLKSKAQSAPVPRPVPLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIGNPF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1021 2.2.26 [Sep-21-2011]
Q54JE41013 2-oxoglutarate dehydrogen yes no 0.937 0.944 0.521 0.0
O743781009 2-oxoglutarate dehydrogen yes no 0.908 0.919 0.502 0.0
P209671014 2-oxoglutarate dehydrogen yes no 0.950 0.956 0.464 0.0
Q60HE21023 2-oxoglutarate dehydrogen N/A no 0.945 0.943 0.465 0.0
Q022181023 2-oxoglutarate dehydrogen yes no 0.945 0.943 0.465 0.0
Q5RCB81023 2-oxoglutarate dehydrogen yes no 0.945 0.943 0.464 0.0
Q5XI781023 2-oxoglutarate dehydrogen yes no 0.946 0.944 0.465 0.0
Q605971023 2-oxoglutarate dehydrogen yes no 0.946 0.944 0.464 0.0
Q6P6Z81021 2-oxoglutarate dehydrogen N/A no 0.899 0.899 0.489 0.0
Q148N01023 2-oxoglutarate dehydrogen yes no 0.952 0.951 0.459 0.0
>sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=ogdh PE=3 SV=1 Back     alignment and function desciption
 Score = 1078 bits (2788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/999 (52%), Positives = 680/999 (68%), Gaps = 42/999 (4%)

Query: 41   STVLKSKAQSAPVPRPVPLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNF 100
            S V +S +    + +P     L+++FLDGTSS Y+E++  +W  DP SV  SW +FF + 
Sbjct: 23   SAVKRSFSTVGGINQPKSRKELSESFLDGTSSTYVEDMFANWVKDPKSVHPSWASFFESS 82

Query: 101  -----VGQAATSPGISGQTI------------------QESMRLLLLVRAYQVNGHMKAK 137
                  G+A  SP   G ++                   +SMRLLLLVRAYQV GH  A 
Sbjct: 83   ERGVPAGEAFMSPPTLGSSVATKATPSTYTSSGSPKQVSDSMRLLLLVRAYQVRGHALAN 142

Query: 138  LDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQ 197
            LDPLGLE +E P + +PA YGFTEAD+DR  F+G   ++GFL+  +P  TLR +L RL++
Sbjct: 143  LDPLGLEVKEEPAEFNPAKYGFTEADMDRPIFVGEGFISGFLTNKQPETTLRQVLKRLKE 202

Query: 198  AYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKW 257
             YCG IG EYMHI DRE C+W+RDK ET  P++   + +  IL+RL W+ QFE FL  K+
Sbjct: 203  TYCGDIGIEYMHIQDREMCDWIRDKFETSQPVEIPDKEKIKILERLSWADQFEGFLGLKY 262

Query: 258  TTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSE 317
               +RFGL+G E+LIPGMK M D A + GVESIV+GMPHRGRLNVL NVVRKPL  IF+E
Sbjct: 263  RATRRFGLDGCESLIPGMKAMIDTATEDGVESIVLGMPHRGRLNVLANVVRKPLPAIFNE 322

Query: 318  FSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKT 377
            F+GG   ++  G Y+ TGDVKYHLGTSYDR T  GK++HLSLVANPSHLEAV+P+V GK 
Sbjct: 323  FNGGVISIE--GEYSATGDVKYHLGTSYDRVTSSGKKVHLSLVANPSHLEAVNPLVEGKV 380

Query: 378  RAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAF 437
            RAKQ+YS D ++ K+MAV +HGD S AGQGVVYETLHLS L NYS GGT+HIVVNNQ+ F
Sbjct: 381  RAKQHYSKDTEQKKSMAVQLHGDASVAGQGVVYETLHLSNLDNYSTGGTVHIVVNNQIGF 440

Query: 438  TTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCY 497
            TT+P   RSS+YCTDVAK +D P+FHVNGD++EAV  VC++AAEWRQ F  DV VD+VCY
Sbjct: 441  TTNPKYSRSSKYCTDVAKTIDIPVFHVNGDNVEAVVKVCKIAAEWRQKFKRDVFVDIVCY 500

Query: 498  RRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSE 557
            R+ GHNE D+P FTQP MY  I      +E Y NKL+  + +TQE   +++  ++    +
Sbjct: 501  RKHGHNETDQPKFTQPIMYDKIGKQQPIIEKYSNKLIAEKVITQEQYLQMKNIIHESYEK 560

Query: 558  EFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHR 617
             +     +VPN  DWL + W GFKSP +L     TG+  ++L+ +GK + T P  F+ H 
Sbjct: 561  GYQDGMKHVPNAEDWLESRWEGFKSPIELGNPGRTGIDQDLLQKIGKVLYTEPSGFEVHS 620

Query: 618  GVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHD 677
             +K++ + +  M + G G DWA  EALAF +LL++GNHVRLSGQDVERGTFSHRH+V HD
Sbjct: 621  TIKRLLKEKKDMFDKGTGFDWATAEALAFGSLLLDGNHVRLSGQDVERGTFSHRHAVWHD 680

Query: 678  QETGEQYCPLDHV---MMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFG 734
            Q+T + Y PL  +   +  +DA  F  SNSSLSEF VLGFELGYS+ENP++L++WEAQFG
Sbjct: 681  QKTDQTYAPLTKLATALGKKDAAEFVASNSSLSEFAVLGFELGYSLENPDALILWEAQFG 740

Query: 735  DFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYV 794
            DF+NGAQVI DQF++SGE KW+RQSGL ++LPHGYDG GPEHSS R+ER+LQ+ D +P  
Sbjct: 741  DFSNGAQVIIDQFISSGEQKWMRQSGLTMLLPHGYDGAGPEHSSCRIERYLQLCDSDPNK 800

Query: 795  IPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKS 854
            IP  +   R Q Q CN Q++N +TP NYFH LRRQ+HR+FRKPLV+ +PK LLR+++  S
Sbjct: 801  IPPKEEAERKQSQHCNMQVLNCSTPVNYFHALRRQVHRDFRKPLVIATPKYLLRYEKSFS 860

Query: 855  NLSEFDDVQGHPGFDKQGTRFKRLIKDQ-NEHSDLEEGIRRLILCSGKVYYELYEERKKH 913
               EF +             F RL  +   +  +  E I R++ C+G+VYY L   R+ +
Sbjct: 861  TAKEFSN-----------DSFTRLYPEAFPDQINKPEKINRIVFCTGQVYYNLIASRESN 909

Query: 914  SASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAV 973
            +  D+AI RVEQL PFP+DLV  +L+ YPNA+ +W QEEPMNMG + YI P   +  K +
Sbjct: 910  NIKDVAIIRVEQLHPFPFDLVAEQLQHYPNAKAIWCQEEPMNMGYWNYIYPYFISTFKHI 969

Query: 974  DRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 1012
            +R    DI Y GR  SA+ A   + +H  +    +  A+
Sbjct: 970  NRPA--DITYTGRPSSASPAVASHTLHKLQLENFLSNAL 1006
The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).
Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 2EC: .EC: 4EC: .EC: 2
>sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1 Back     alignment and function description
>sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=OGDH PE=2 SV=1 Back     alignment and function description
>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3 Back     alignment and function description
>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH PE=2 SV=1 Back     alignment and function description
>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ogdh PE=1 SV=1 Back     alignment and function description
>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh PE=1 SV=3 Back     alignment and function description
>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis GN=ogdh PE=2 SV=1 Back     alignment and function description
>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1021
2241095801021 predicted protein [Populus trichocarpa] 0.999 0.999 0.893 0.0
2555751201021 2-oxoglutarate dehydrogenase, putative [ 1.0 1.0 0.889 0.0
2241009291021 predicted protein [Populus trichocarpa] 0.999 0.999 0.891 0.0
4494599281022 PREDICTED: 2-oxoglutarate dehydrogenase, 1.0 0.999 0.883 0.0
4494499701021 PREDICTED: 2-oxoglutarate dehydrogenase, 0.996 0.996 0.876 0.0
4494838891021 PREDICTED: 2-oxoglutarate dehydrogenase, 0.996 0.996 0.876 0.0
2977941871025 E1 subunit of 2-oxoglutarate dehydrogena 0.996 0.992 0.861 0.0
2978168341017 hypothetical protein ARALYDRAFT_485968 [ 0.995 0.999 0.857 0.0
306942421017 2-oxoglutarate dehydrogenase, E1 compone 0.995 0.999 0.858 0.0
152391281025 2-oxoglutarate dehydrogenase, E1 compone 0.996 0.992 0.860 0.0
>gi|224109580|ref|XP_002315242.1| predicted protein [Populus trichocarpa] gi|222864282|gb|EEF01413.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1947 bits (5043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 911/1020 (89%), Positives = 975/1020 (95%)

Query: 1    MGWFRASSGVAKLAIRRTLSQGCSYTTRAQVFPSRSRCFHSTVLKSKAQSAPVPRPVPLS 60
            M WFRA SGVA+LAIRRTLSQG SY TR++V P ++R FHSTV KSKAQ+APVPRPVPLS
Sbjct: 1    MAWFRAGSGVARLAIRRTLSQGGSYATRSRVIPPQNRYFHSTVFKSKAQAAPVPRPVPLS 60

Query: 61   RLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQESMR 120
            +LTDNFLDGTSSVYLEELQR+WE DPNSVDESW NFF+NFVGQAATSPGISGQTIQESMR
Sbjct: 61   KLTDNFLDGTSSVYLEELQRAWETDPNSVDESWDNFFKNFVGQAATSPGISGQTIQESMR 120

Query: 121  LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAGFLS 180
            LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPA YGFT+ADLDREFFLGVW MAGFLS
Sbjct: 121  LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPALYGFTDADLDREFFLGVWRMAGFLS 180

Query: 181  ENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVIL 240
            ENRPVQTLR+ILTRLEQAYCGSIG+EYMHI+DREKCNWLRDKIETPT MQYNRQRREVIL
Sbjct: 181  ENRPVQTLRAILTRLEQAYCGSIGYEYMHIADREKCNWLRDKIETPTSMQYNRQRREVIL 240

Query: 241  DRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRL 300
            DRL+WSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDR+ADLGVESIVIGMPHRGRL
Sbjct: 241  DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL 300

Query: 301  NVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360
            NVLGNVVRKPLRQIFSEFSGGT+PVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
Sbjct: 301  NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360

Query: 361  ANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPN 420
            ANPSHLEAVDPVV+GKTRAKQYYSND DRTKNM +LIHGDGSFAGQGVVYETLHLSALPN
Sbjct: 361  ANPSHLEAVDPVVVGKTRAKQYYSNDSDRTKNMGILIHGDGSFAGQGVVYETLHLSALPN 420

Query: 421  YSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAA 480
            Y+ GGTIHIVVNNQVAFTTDP +GRSSQYCTDVAKAL+APIFHVNGDDMEAV HVCELAA
Sbjct: 421  YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDMEAVVHVCELAA 480

Query: 481  EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVT 540
            EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMY++IR+HPS+LEIY+ KLLE   VT
Sbjct: 481  EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSALEIYKKKLLESGQVT 540

Query: 541  QEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILK 600
            +EDI++IQEKV  IL+EEF+ASKDYVP RRDWLS++W+GFKSPEQLSR+RNTGVKPEILK
Sbjct: 541  EEDISRIQEKVLSILNEEFLASKDYVPKRRDWLSSHWTGFKSPEQLSRVRNTGVKPEILK 600

Query: 601  NVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVRLSG 660
            NVGKAITT PENFKPHR VKKVYE R QMIETGEGIDWA+GEALAFATLLVEGNHVRLSG
Sbjct: 601  NVGKAITTFPENFKPHRAVKKVYEQRLQMIETGEGIDWAVGEALAFATLLVEGNHVRLSG 660

Query: 661  QDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSM 720
            QDVERGTFSHRHSV+HDQETGE+YCPLDHV+MNQD EMFTVSNSSLSEFGVLGFELGYSM
Sbjct: 661  QDVERGTFSHRHSVVHDQETGEKYCPLDHVVMNQDEEMFTVSNSSLSEFGVLGFELGYSM 720

Query: 721  ENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSAR 780
            E+PNSLV+WEAQFGDFANGAQVIFDQF++SGESKWLRQ+GLV++LPHGYDGQGPEHSSAR
Sbjct: 721  ESPNSLVIWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVLLLPHGYDGQGPEHSSAR 780

Query: 781  LERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKPLVV 840
            LERFLQMSDDNPYVIPEM+ TLR QIQECNWQ+VNVTTPANYFHVLRRQIHR+FRKPLVV
Sbjct: 781  LERFLQMSDDNPYVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKPLVV 840

Query: 841  MSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLILCSG 900
            ++PKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKD+N+HSDLEEGIRRL+LCSG
Sbjct: 841  IAPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDRNDHSDLEEGIRRLVLCSG 900

Query: 901  KVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYT 960
            K+YYEL E R K  A DIAICRVEQLCPFPYDL+QRELKRYPNAE+VW QEEPMNMGAY 
Sbjct: 901  KIYYELDEVRGKVEAKDIAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYN 960

Query: 961  YIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIGNP 1020
            YIAPRL TAMKA++RGT++DIKYVGR PSAASATGFYQVHVKEQ+EL+Q A+QPEPI  P
Sbjct: 961  YIAPRLSTAMKALERGTVDDIKYVGRGPSAASATGFYQVHVKEQTELVQMAMQPEPIKFP 1020

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255575120|ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gi|223532141|gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224100929|ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|222851892|gb|EEE89439.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449459928|ref|XP_004147698.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] gi|449518101|ref|XP_004166082.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449449970|ref|XP_004142737.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449483889|ref|XP_004156723.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297794187|ref|XP_002864978.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp. lyrata] gi|297310813|gb|EFH41237.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297816834|ref|XP_002876300.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] gi|297322138|gb|EFH52559.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30694242|ref|NP_191101.2| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gi|332645860|gb|AEE79381.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15239128|ref|NP_201376.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gi|10177333|dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gi|18389254|gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gi|20465597|gb|AAM20281.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gi|332010718|gb|AED98101.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1021
TAIR|locus:21700001025 AT5G65750 [Arabidopsis thalian 0.996 0.992 0.860 0.0
TAIR|locus:20999811017 AT3G55410 [Arabidopsis thalian 0.995 0.999 0.858 0.0
DICTYBASE|DDB_G02881271013 ogdh "2-oxoglutarate dehydroge 0.873 0.880 0.546 1.1e-284
ASPGD|ASPL00000299041048 kgdA [Emericella nidulans (tax 0.866 0.844 0.533 1.3e-270
UNIPROTKB|G4NAT31008 MGG_12767 "2-oxoglutarate dehy 0.870 0.881 0.522 3.1e-267
POMBASE|SPBC3H7.03c1009 SPBC3H7.03c "2-oxoglutarate de 0.855 0.865 0.527 4.6e-264
SGD|S0000013871014 KGD1 "Subunit of the mitochond 0.894 0.900 0.491 1e-255
CGD|CAL0006070996 KGD1 [Candida albicans (taxid: 0.871 0.893 0.501 1.1e-253
UNIPROTKB|F1PK401021 OGDHL "Uncharacterized protein 0.860 0.860 0.5 1.4e-251
UNIPROTKB|E9PCR71038 OGDH "2-oxoglutarate dehydroge 0.819 0.806 0.506 5.8e-248
TAIR|locus:2170000 AT5G65750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4750 (1677.1 bits), Expect = 0., P = 0.
 Identities = 878/1020 (86%), Positives = 954/1020 (93%)

Query:     1 MGWFRASSGVAKLAIRRTLSQG-C-SYTTRAQVFPSRSRCFHSTVLKSKAQSA-PVPRPV 57
             M WFR  S VAKLAIRRTLSQ  C SY TR +V P ++RCFHST+LKSKA+SA PVPRPV
Sbjct:     1 MVWFRIGSSVAKLAIRRTLSQSRCGSYATRTRVLPCQTRCFHSTILKSKAESAAPVPRPV 60

Query:    58 PLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQE 117
             PLS+LTD+FLDGTSSVYLEELQR+WEADPNSVDESW NFFRNFVGQA+TSPGISGQTIQE
Sbjct:    61 PLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQASTSPGISGQTIQE 120

Query:   118 SMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWSMAG 177
             SMRLLLLVRAYQVNGHMKAKLDPLGLE+REIP+DL P  YGFTEADLDREFFLGVW M+G
Sbjct:   121 SMRLLLLVRAYQVNGHMKAKLDPLGLEKREIPEDLTPGLYGFTEADLDREFFLGVWRMSG 180

Query:   178 FLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRRE 237
             FLSENRPVQTLRSIL+RLEQAYCG+IG+EYMHI+DR+KCNWLRDKIETPTP QYN +RR 
Sbjct:   181 FLSENRPVQTLRSILSRLEQAYCGTIGYEYMHIADRDKCNWLRDKIETPTPRQYNSERRM 240

Query:   238 VILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHR 297
             VI DRL WSTQFENFLATKWTTAKRFGLEG E+LIPGMKEMFDR+ADLGVE+IVIGMPHR
Sbjct:   241 VIYDRLTWSTQFENFLATKWTTAKRFGLEGAESLIPGMKEMFDRSADLGVENIVIGMPHR 300

Query:   298 GRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHL 357
             GRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGK +HL
Sbjct:   301 GRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKHLHL 360

Query:   358 SLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSA 417
             SLVANPSHLEAVDPVVIGKTRAKQYY+ D +RTKNM +LIHGDGSFAGQGVVYETLHLSA
Sbjct:   361 SLVANPSHLEAVDPVVIGKTRAKQYYTKDENRTKNMGILIHGDGSFAGQGVVYETLHLSA 420

Query:   418 LPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCE 477
             LPNY  GGT+HIVVNNQVAFTTDP  GRSSQYCTDVAKAL APIFHVN DD+EAV H CE
Sbjct:   421 LPNYCTGGTVHIVVNNQVAFTTDPREGRSSQYCTDVAKALSAPIFHVNADDIEAVVHACE 480

Query:   478 LAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQ 537
             LAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYK+IRSHPSSL+IYQ KLL+  
Sbjct:   481 LAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIRSHPSSLQIYQEKLLQSG 540

Query:   538 HVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRIRNTGVKPE 597
              VTQEDI+KIQ+KV+ IL+EE+ ASKDY+P +RDWL+++W+GFKSPEQ+SRIRNTGVKPE
Sbjct:   541 QVTQEDIDKIQKKVSSILNEEYEASKDYIPQKRDWLASHWTGFKSPEQISRIRNTGVKPE 600

Query:   598 ILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLVEGNHVR 657
             ILKNVGKAI+T PENFKPHRGVK+VYE RAQMIE+GEGIDW LGEALAFATL+VEGNHVR
Sbjct:   601 ILKNVGKAISTFPENFKPHRGVKRVYEQRAQMIESGEGIDWGLGEALAFATLVVEGNHVR 660

Query:   658 LSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELG 717
             LSGQDVERGTFSHRHSVLHDQETGE+YCPLDH++ NQD EMFTVSNSSLSEFGVLGFELG
Sbjct:   661 LSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLIKNQDPEMFTVSNSSLSEFGVLGFELG 720

Query:   718 YSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHS 777
             YSMENPNSLV+WEAQFGDFANGAQV+FDQF++SGE+KWLRQ+GLVV+LPHGYDGQGPEHS
Sbjct:   721 YSMENPNSLVIWEAQFGDFANGAQVMFDQFISSGEAKWLRQTGLVVLLPHGYDGQGPEHS 780

Query:   778 SARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQIHREFRKP 837
             S RLERFLQMSDDNPYVIPEMD TLR QIQECNWQ+VNVTTPANYFHVLRRQIHR+FRKP
Sbjct:   781 SGRLERFLQMSDDNPYVIPEMDPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKP 840

Query:   838 LVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEEGIRRLIL 897
             L+VM+PKNLLRHK+C SNLSEFDDV+GHPGFDKQGTRFKRLIKDQ+ HSDLEEGIRRL+L
Sbjct:   841 LIVMAPKNLLRHKQCVSNLSEFDDVKGHPGFDKQGTRFKRLIKDQSGHSDLEEGIRRLVL 900

Query:   898 CSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMG 957
             CSGKVYYEL EERKK    D+AICRVEQLCPFPYDL+QRELKRYPNAE+VW QEEPMNMG
Sbjct:   901 CSGKVYYELDEERKKSETKDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMG 960

Query:   958 AYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPI 1017
              Y YIA RLCTAMKA+ RG   DIKYVGR PSAA+ATGFYQ+HVKEQ++L++KA+QP+PI
Sbjct:   961 GYQYIALRLCTAMKALQRGNFNDIKYVGRLPSAATATGFYQLHVKEQTDLVKKALQPDPI 1020
GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0006099 "tricarboxylic acid cycle" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA
GO:0030976 "thiamine pyrophosphate binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0008270 "zinc ion binding" evidence=IDA
GO:0050897 "cobalt ion binding" evidence=IDA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2099981 AT3G55410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288127 ogdh "2-oxoglutarate dehydrogenase, E1 subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029904 kgdA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NAT3 MGG_12767 "2-oxoglutarate dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPBC3H7.03c SPBC3H7.03c "2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex) (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
SGD|S000001387 KGD1 "Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase complex" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0006070 KGD1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|F1PK40 OGDHL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PCR7 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A5VSQ0ODO1_BRUO21, ., 2, ., 4, ., 20.47860.84520.8595yesno
Q57AX5ODO1_BRUAB1, ., 2, ., 4, ., 20.47970.84520.8595yesno
Q4UKI8ODO1_RICFE1, ., 2, ., 4, ., 20.44820.81680.8536yesno
Q2YLS2ODO1_BRUA21, ., 2, ., 4, ., 20.47970.84520.8595yesno
Q1RHI4ODO1_RICBR1, ., 2, ., 4, ., 20.42980.87360.9622yesno
Q59106ODO1_CUPNH1, ., 2, ., 4, ., 20.42900.87260.9378yesno
Q60597ODO1_MOUSE1, ., 2, ., 4, ., 20.46490.94610.9442yesno
A9M8Q9ODO1_BRUC21, ., 2, ., 4, ., 20.47860.84520.8595yesno
O74378ODO1_SCHPO1, ., 2, ., 4, ., 20.50250.90890.9197yesno
O61199ODO1_CAEEL1, ., 2, ., 4, ., 20.47830.89810.8911yesno
A6WXF0ODO1_OCHA41, ., 2, ., 4, ., 20.44910.89220.9100yesno
Q5XI78ODO1_RAT1, ., 2, ., 4, ., 20.46590.94610.9442yesno
B2S877ODO1_BRUA11, ., 2, ., 4, ., 20.47970.84520.8595yesno
P0AFG4ODO1_ECOL61, ., 2, ., 4, ., 20.41400.87650.9592yesno
Q92J42ODO1_RICCN1, ., 2, ., 4, ., 20.42750.87260.9601yesno
Q54JE4ODO1_DICDI1, ., 2, ., 4, ., 20.52150.93730.9447yesno
B0CIS7ODO1_BRUSI1, ., 2, ., 4, ., 20.47860.84520.8595yesno
Q8FYF7ODO1_BRUSU1, ., 2, ., 4, ., 20.47860.84520.8595yesno
Q68XI7ODO1_RICTY1, ., 2, ., 4, ., 20.42690.87750.9603yesno
P20967ODO1_YEAST1, ., 2, ., 4, ., 20.46440.95000.9566yesno
Q9ZDY3ODO1_RICPR1, ., 2, ., 4, ., 20.42970.87360.9529yesno
Q02218ODO1_HUMAN1, ., 2, ., 4, ., 20.46540.94510.9433yesno
Q8YJE4ODO1_BRUME1, ., 2, ., 4, ., 20.47750.84520.8595yesno
P20707ODO1_AZOVI1, ., 2, ., 4, ., 20.41280.87360.9459yesno
P45303ODO1_HAEIN1, ., 2, ., 4, ., 20.39750.86970.9497yesno
Q5RCB8ODO1_PONAB1, ., 2, ., 4, ., 20.46450.94510.9433yesno
Q72PJ7ODO1_LEPIC1, ., 2, ., 4, ., 20.42900.86770.9630yesno
P51056ODO1_COXBU1, ., 2, ., 4, ., 20.43220.87260.9539yesno
C0RFG8ODO1_BRUMB1, ., 2, ., 4, ., 20.47750.84520.8595yesno
Q148N0ODO1_BOVIN1, ., 2, ., 4, ., 20.45900.95290.9511yesno
Q8F6S7ODO1_LEPIN1, ., 2, ., 4, ., 20.42900.86770.9630yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.2.40.963
4th Layer1.2.4.20.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_X2288
hypothetical protein (1021 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_XIV0422
hypothetical protein (373 aa)
• ••••• 0.995
estExt_Genewise1_v1.C_LG_XI2803
hypothetical protein (467 aa)
• ••••• 0.992
LPD1
precursor of dehydrogenase dihydrolipoamide dehydrogenase 1 (EC-1.8.1.4) (511 aa)
• ••••• 0.981
LPD4
precursor of dehydrogenase dihydrolipoamide dehydrogenase 4 (EC-1.8.1.4) (529 aa)
•    •• 0.934
LPD3
precursor of dehydrogenase dihydrolipoamide dehydrogenase 3 (EC-1.8.1.4) (527 aa)
•    •• 0.934
grail3.0032001601
hypothetical protein (434 aa)
• ••••• 0.926
estExt_fgenesh4_pg.C_LG_XVI0781
SubName- Full=Putative uncharacterized protein; (363 aa)
   •••• 0.921
eugene3.00280188
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (361 aa)
   •••• 0.921
estExt_fgenesh4_pg.C_660173
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (371 aa)
   • •• 0.918
estExt_fgenesh4_pg.C_LG_VII0812
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (367 aa)
   • •• 0.918

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1021
PRK09404924 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 co 0.0
COG0567906 COG0567, SucA, 2-oxoglutarate dehydrogenase comple 0.0
PRK122701228 PRK12270, kgd, alpha-ketoglutarate decarboxylase; 0.0
TIGR00239929 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenas 0.0
cd02016265 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate 0.0
pfam00676303 pfam00676, E1_dh, Dehydrogenase E1 component 1e-54
pfam02779172 pfam02779, Transket_pyr, Transketolase, pyrimidine 8e-51
smart00861136 smart00861, Transket_pyr, Transketolase, pyrimidin 3e-25
TIGR03182315 TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E 1e-11
cd02000293 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph 4e-11
COG1071358 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogena 1e-09
CHL00149341 CHL00149, odpA, pyruvate dehydrogenase E1 componen 9e-06
PLN02374433 PLN02374, PLN02374, pyruvate dehydrogenase (acetyl 4e-04
PRK12270 1228 PRK12270, kgd, alpha-ketoglutarate decarboxylase; 0.001
>gnl|CDD|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information 
 Score = 1384 bits (3585), Expect = 0.0
 Identities = 481/964 (49%), Positives = 616/964 (63%), Gaps = 70/964 (7%)

Query: 66   FLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNF---------------VGQAATSPGI 110
            FL G ++ Y+EEL   +  DP+SVDE W+ FF                    + A    +
Sbjct: 13   FLFGANAAYIEELYEQYLKDPDSVDEEWRAFFDGLPGVAPDVAHSAVRESFRRLAKPARV 72

Query: 111  SGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFL 170
            S       +++L L+ AY+  GH+ A LDPLGL +R    +LDPAFYG TEADLDR F  
Sbjct: 73   SSAVSDPQVKVLQLINAYRFRGHLAANLDPLGLWKRPDVPELDPAFYGLTEADLDRTFNT 132

Query: 171  GVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQ 230
            G         E     TLR I+  L++ YCGSIG EYMHISD E+  WL+ +IE+  P  
Sbjct: 133  GSL---ALGKETA---TLREIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESGRP-S 185

Query: 231  YNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESI 290
            ++ + ++ IL+RL  +  FE FL TK+   KRF LEGGE+LIP + E+  RA  LGV+ I
Sbjct: 186  FSAEEKKAILERLTAAEGFERFLHTKFVGQKRFSLEGGESLIPMLDEIIRRAGKLGVKEI 245

Query: 291  VIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTR 350
            VIGM HRGRLNVL NV+ KP R +F+EF G   P +      G+GDVKYHLG S DR T 
Sbjct: 246  VIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEV----LGSGDVKYHLGFSSDRETD 301

Query: 351  GGKRIHLSLVANPSHLEAVDPVVIGKTRAKQ-YYSNDMDRTKNMAVLIHGDGSFAGQGVV 409
            GG+ +HLSL  NPSHLE V+PVV G  RA+Q    +  DR K + +LIHGD +FAGQGVV
Sbjct: 302  GGE-VHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDGQDRKKVLPILIHGDAAFAGQGVV 360

Query: 410  YETLHLSALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDM 469
             ETL+LS L  Y  GGTIHIV+NNQ+ FTT P   RS+ YCTDVAK + APIFHVNGDD 
Sbjct: 361  AETLNLSQLRGYRTGGTIHIVINNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVNGDDP 420

Query: 470  EAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIY 529
            EAV     LA E+RQ F  DVV+DLVCYRR GHNE DEPSFTQP MYK I+ HP++ E+Y
Sbjct: 421  EAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHNEGDEPSFTQPLMYKKIKKHPTTRELY 480

Query: 530  QNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYWSGFKSPEQLSRI 589
             +KL+    +T+E+ +++  +    L   F   K++ P   DWL+  WS +    +    
Sbjct: 481  ADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEWRPA--DWLAGDWSPYL-GHEWDDP 537

Query: 590  RNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATL 649
             +TGV  E LK + + +TT+PE FK H  VKK+ E R +M E  + IDW + EALAFA+L
Sbjct: 538  VDTGVPLERLKELAEKLTTVPEGFKVHPKVKKILEDRREMAEGEKPIDWGMAEALAFASL 597

Query: 650  LVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAEMFTVSNSSLSEF 709
            L EG  VRLSGQD  RGTFSHRH+VLHDQ+TGE Y PL+H+   Q +  F V +S LSE 
Sbjct: 598  LDEGYPVRLSGQDSGRGTFSHRHAVLHDQKTGETYIPLNHLSEGQAS--FEVYDSPLSEE 655

Query: 710  GVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGY 769
             VLGFE GYS   PN+LV+WEAQFGDFANGAQV+ DQF++SGE KW R SGLV++LPHGY
Sbjct: 656  AVLGFEYGYSTAEPNTLVIWEAQFGDFANGAQVVIDQFISSGEQKWGRLSGLVMLLPHGY 715

Query: 770  DGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVTTPANYFHVLRRQ 829
            +GQGPEHSSARLERFLQ+  ++                  N Q+ N TTPA YFH+LRRQ
Sbjct: 716  EGQGPEHSSARLERFLQLCAED------------------NMQVCNPTTPAQYFHLLRRQ 757

Query: 830  IHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLE 889
              R FRKPLVVM+PK+LLRH    S+L E    +G          F+ +I D +E     
Sbjct: 758  ALRPFRKPLVVMTPKSLLRHPLAVSSLEEL--AEG---------SFQPVIGDIDELDP-- 804

Query: 890  EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVW 948
            + ++R++LCSGKVYY+L E R+K    D+AI R+EQL PFP++ +  EL +YPNA EVVW
Sbjct: 805  KKVKRVVLCSGKVYYDLLEARRKRGIDDVAIVRIEQLYPFPHEELAAELAKYPNAKEVVW 864

Query: 949  SQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELM 1008
             QEEP N GA+ +I   L   +    +     ++Y GR  SA+ A G+  +H K+Q  L+
Sbjct: 865  CQEEPKNQGAWYFIQHHLEEVLPEGQK-----LRYAGRPASASPAVGYMSLHKKQQEALV 919

Query: 1009 QKAI 1012
            + A+
Sbjct: 920  EDAL 923

Length = 924
>gnl|CDD|223641 COG0567, SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|161785 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>gnl|CDD|238974 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>gnl|CDD|201386 pfam00676, E1_dh, Dehydrogenase E1 component Back     alignment and domain information
>gnl|CDD|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|234139 TIGR03182, PDH_E1_alph_y, pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>gnl|CDD|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>gnl|CDD|223997 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|177069 CHL00149, odpA, pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>gnl|CDD|215213 PLN02374, PLN02374, pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1021
KOG04501017 consensus 2-oxoglutarate dehydrogenase, E1 subunit 100.0
PRK122701228 kgd alpha-ketoglutarate decarboxylase; Reviewed 100.0
TIGR00239929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 100.0
COG0567906 SucA 2-oxoglutarate dehydrogenase complex, dehydro 100.0
PRK09404924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 100.0
KOG0451913 consensus Predicted 2-oxoglutarate dehydrogenase, 100.0
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 100.0
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
PLN02269362 Pyruvate dehydrogenase E1 component subunit alpha 100.0
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 100.0
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 100.0
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 100.0
COG0022324 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
KOG0225394 consensus Pyruvate dehydrogenase E1, alpha subunit 100.0
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 100.0
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 100.0
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 100.0
PRK12315581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
TIGR00204617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 100.0
KOG1182432 consensus Branched chain alpha-keto acid dehydroge 100.0
KOG0524359 consensus Pyruvate dehydrogenase E1, beta subunit 100.0
KOG0525362 consensus Branched chain alpha-keto acid dehydroge 100.0
PRK05444580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK12571641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PLN02234641 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02582677 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PRK05899624 transketolase; Reviewed 100.0
PLN02225701 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PTZ00182355 3-methyl-2-oxobutanate dehydrogenase; Provisional 100.0
CHL00144327 odpB pyruvate dehydrogenase E1 component beta subu 100.0
PRK11892464 pyruvate dehydrogenase subunit beta; Provisional 100.0
PLN02683356 pyruvate dehydrogenase E1 component subunit beta 100.0
TIGR00232653 tktlase_bact transketolase, bacterial and yeast. T 100.0
PRK09212327 pyruvate dehydrogenase subunit beta; Validated 100.0
PRK12753663 transketolase; Reviewed 100.0
PLN02790654 transketolase 100.0
PTZ00089661 transketolase; Provisional 100.0
COG1154627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 100.0
PRK12754663 transketolase; Reviewed 100.0
TIGR03186889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 99.95
KOG0523632 consensus Transketolase [Carbohydrate transport an 99.94
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 99.93
PRK09405891 aceE pyruvate dehydrogenase subunit E1; Reviewed 99.93
PRK13012896 2-oxoacid dehydrogenase subunit E1; Provisional 99.92
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 99.91
COG3958312 Transketolase, C-terminal subunit [Carbohydrate tr 99.86
COG0021663 TktA Transketolase [Carbohydrate transport and met 99.86
PRK05261785 putative phosphoketolase; Provisional 99.86
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 99.77
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 99.75
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 99.69
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 99.63
TIGR00759885 aceE pyruvate dehydrogenase E1 component, homodime 99.58
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 99.54
PF00456332 Transketolase_N: Transketolase, thiamine diphospha 99.49
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 99.44
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 99.42
cd02017386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 99.37
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 99.18
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 99.13
PF02780124 Transketolase_C: Transketolase, C-terminal domain; 99.13
TIGR03336 595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 99.1
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 99.1
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 99.09
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 99.09
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 99.03
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 98.96
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 98.93
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 98.93
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 98.9
PRK07524535 hypothetical protein; Provisional 98.89
PRK07119352 2-ketoisovalerate ferredoxin reductase; Validated 98.89
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 98.89
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 98.88
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 98.87
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 98.83
PRK06163202 hypothetical protein; Provisional 98.82
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 98.8
PRK08327569 acetolactate synthase catalytic subunit; Validated 98.79
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 98.79
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 98.75
PRK08366390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 98.75
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 98.75
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 98.74
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 98.72
PRK09622407 porA pyruvate flavodoxin oxidoreductase subunit al 98.71
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 98.7
PRK06546578 pyruvate dehydrogenase; Provisional 98.7
PRK09627375 oorA 2-oxoglutarate-acceptor oxidoreductase subuni 98.7
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 98.68
PRK08659376 2-oxoglutarate ferredoxin oxidoreductase subunit a 98.68
PRK07092530 benzoylformate decarboxylase; Reviewed 98.67
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 98.64
PRK08266542 hypothetical protein; Provisional 98.62
PRK06154565 hypothetical protein; Provisional 98.61
PRK12474518 hypothetical protein; Provisional 98.61
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 98.59
PRK11269591 glyoxylate carboligase; Provisional 98.59
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 98.56
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 98.56
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 98.56
PRK07586514 hypothetical protein; Validated 98.55
PRK07064544 hypothetical protein; Provisional 98.55
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 98.54
PRK09124574 pyruvate dehydrogenase; Provisional 98.54
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 98.52
PRK08155564 acetolactate synthase catalytic subunit; Validated 98.52
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 98.52
PRK06112578 acetolactate synthase catalytic subunit; Validated 98.51
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 98.5
PRK05858542 hypothetical protein; Provisional 98.5
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 98.5
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 98.48
TIGR03710562 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s 98.48
PRK06457549 pyruvate dehydrogenase; Provisional 98.48
PRK08199557 thiamine pyrophosphate protein; Validated 98.48
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 98.47
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 98.47
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 98.46
PLN02573578 pyruvate decarboxylase 98.46
COG3957793 Phosphoketolase [Carbohydrate transport and metabo 98.46
PRK08322547 acetolactate synthase; Reviewed 98.45
CHL00099585 ilvB acetohydroxyacid synthase large subunit 98.45
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 98.43
PRK08617552 acetolactate synthase; Reviewed 98.42
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 98.42
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 98.42
PRK08367394 porA pyruvate ferredoxin oxidoreductase subunit al 98.42
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 98.41
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 98.41
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 98.4
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 98.4
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 98.4
PRK08611576 pyruvate oxidase; Provisional 98.39
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 98.37
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 98.36
PLN02470585 acetolactate synthase 98.36
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 98.36
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 98.35
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 98.35
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 98.35
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 98.32
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 98.32
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 98.3
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 98.29
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 98.29
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 98.26
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 98.25
PRK08273597 thiamine pyrophosphate protein; Provisional 98.23
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 98.14
COG4231 640 Indolepyruvate ferredoxin oxidoreductase, alpha an 98.03
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 97.73
TIGR02176 1165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 97.72
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 97.7
COG2609887 AceE Pyruvate dehydrogenase complex, dehydrogenase 97.54
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 97.54
COG0674365 PorA Pyruvate:ferredoxin oxidoreductase and relate 97.51
KOG4166675 consensus Thiamine pyrophosphate-requiring enzyme 97.32
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 97.22
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 97.14
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 97.11
PRK12270 1228 kgd alpha-ketoglutarate decarboxylase; Reviewed 97.1
PF09364379 XFP_N: XFP N-terminal domain; InterPro: IPR018970 96.97
COG1013294 PorB Pyruvate:ferredoxin oxidoreductase and relate 96.75
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 96.72
COG3960592 Glyoxylate carboligase [General function predictio 96.34
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 95.93
COG3962617 Acetolactate synthase [Amino acid transport and me 95.15
cd03377365 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), 94.04
COG4231640 Indolepyruvate ferredoxin oxidoreductase, alpha an 93.9
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 93.7
TIGR021761165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 90.77
PF03894179 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate 88.01
cd07038162 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom 85.71
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 83.77
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 83.58
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 83.1
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 82.58
PRK08659376 2-oxoglutarate ferredoxin oxidoreductase subunit a 82.07
>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=5.9e-272  Score=2268.37  Aligned_cols=941  Identities=63%  Similarity=1.070  Sum_probs=897.7

Q ss_pred             CCCCCCCCCCCCCCCccCCCCHHHHHHHHHHHhhCCCCcCHHHHHHHhhccC------CCCCCCC---------------
Q 001713           51 APVPRPVPLSRLTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVG------QAATSPG---------------  109 (1021)
Q Consensus        51 ~~~~~~~~~~~~~~~~l~~~n~~yie~lY~~~~~dP~sV~~sW~~~F~~~~~------~~~~~~~---------------  109 (1021)
                      ++.++.++++...++||+|+++.||||||++|++||+|||.||++||+++..      ++++.|+               
T Consensus        35 ~~~~r~~~~~~~td~Fl~g~ss~YveEmy~AW~~dP~SVh~SWDayFrn~~~~~~~~~~a~~~p~~~~~~~~~t~~~~~~  114 (1017)
T KOG0450|consen   35 QQVPRSVAASVATDPFLSGTSSSYVEEMYRAWLEDPNSVHKSWDAYFRNVSAGAPPPAQASQAPLSRSAAVAGTQSAVAA  114 (1017)
T ss_pred             ccccccccCcccccccccCcchHHHHHHHHHHHcCCchhhhhHHHHHHhcccCCCCccccccCCCccccccccccccccc
Confidence            5677888888899999999999999999999999999999999999999843      1222220               


Q ss_pred             -----CChhhHHHHHHHHHHHHHHHhcCccccccCCCCCCC---C-----CCCCCCCcccCCCCcccccceeecCccccc
Q 001713          110 -----ISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEE---R-----EIPDDLDPAFYGFTEADLDREFFLGVWSMA  176 (1021)
Q Consensus       110 -----~~~~~~~~~~~~~~li~ayr~~Gh~~A~~dPl~~~~---~-----~~~~~l~~~~~g~~~~dl~~~~~~~~~~~~  176 (1021)
                           .+++.+.++++|+.||||||.|||..|+|||||+..   +     +.+++|++++|||+|+|||++|.+.   ++
T Consensus       115 ~~~t~~s~~~v~~hl~vqlLiRaYQirGH~~A~LDPLGi~~~~~~~~~p~~i~~~~~l~~Ygf~E~DLDref~L~---~t  191 (1017)
T KOG0450|consen  115 RPNTGISDKTVEDHLKVQLLIRAYQIRGHHKAKLDPLGINDADLDSSVPADIPEELTLAFYGFTEADLDREFHLP---TT  191 (1017)
T ss_pred             ccCCCcccccHHHHHHHHHHHHHHHhcccccccCCccccccccccccCCCCCChhhhhhhcCCchhhccceeccC---Cc
Confidence                 234678999999999999999999999999999843   2     2466799999999999999999984   45


Q ss_pred             ccccCCCCCcCHHHHHHHHHHHhcCcccccccccCCHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001713          177 GFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATK  256 (1021)
Q Consensus       177 ~~~~~~~~~~~l~~i~~~l~~~Ycg~ig~E~~hi~~~~~~~Wl~~~~E~~~~~~ls~e~~~~i~~~M~~ar~fE~~l~~~  256 (1021)
                      +|++++++.+|||||+++|+++||++||+|||||.|.++|+||++|||+|....+|.|+++-||.+|+++..||+||.+|
T Consensus       192 ~Fi~~~~~~ltLreIl~rlE~~YC~~igvEfmhI~~~eqcnWir~k~EtP~~~q~s~e~k~~il~RL~~st~FE~FLa~K  271 (1017)
T KOG0450|consen  192 TFIGGGESSLTLREILRRLEKAYCGSIGVEFMHINDLEQCNWIRQKFETPGPMQYSHEQKRVILDRLTRSTRFEEFLATK  271 (1017)
T ss_pred             ccccCCCccccHHHHHHHHHHHhhccceeEEEeeCcHHHhHHHHHhccCCCccccCHHHHHHHHHHHHHhhHHHHHHhhh
Confidence            79988899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCcccccCCccchHHHHHHHHHHHhhCCCCcEEEcCCcccHHHHHHHhcCCCHHHHHHHhcCCCCCCCCCCcccCCCC
Q 001713          257 WTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGD  336 (1021)
Q Consensus       257 ~~~~Krfg~eG~Ea~i~gl~~~l~~a~~~g~~D~vigm~HRgrln~La~v~g~~~~~if~Ef~G~~~~~~~G~~~gGsgD  336 (1021)
                      |+..||||+||||++||||+.+|++++++||+++|+||+||||+|+|+||+.||+++||+||.|.... ..     ||||
T Consensus       272 w~seKRFGLEGcE~lIP~mK~iiDrS~elGVe~iviGMpHRGRLNvL~NVvRKpl~qIfseF~g~~~~-De-----GSGD  345 (1017)
T KOG0450|consen  272 WPSEKRFGLEGCEVLIPAMKTIIDRSSELGVESIVIGMPHRGRLNVLANVVRKPLEQIFSEFSGLEAA-DE-----GSGD  345 (1017)
T ss_pred             CCccccccccchhhhhhHHHHHhhhhhhcCchheEecCCccchhHHHHHHHhhHHHHHHHhccCCCCC-cC-----CCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999995433 32     7999


Q ss_pred             ccccccccCCCCCC-CCcceeeeeccccCCcccccceeehHHHHhHHhcCCCCCCCcEEEEEeCccccCCccHHHHHHHh
Q 001713          337 VKYHLGTSYDRPTR-GGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHL  415 (1021)
Q Consensus       337 vkyHlg~s~~~~~~-~g~~i~l~l~~npShlg~~~PvA~G~A~A~q~~~~d~~~~~~v~v~~~GDgA~sGqG~v~Ealnl  415 (1021)
                      ||||+|++.++.+. +|+.|+|+|++|||||+++.||++|.++|.|++.+|.+++|.+.|++||||||+|||+|||||++
T Consensus       346 VKYHLG~~~~R~~r~s~k~i~LslVANPSHLEA~DPVV~GKtrA~q~y~~D~~~~k~m~ILiHGDaaFAgQGVVyET~hl  425 (1017)
T KOG0450|consen  346 VKYHLGMYYERPNRVSGKNITLSLVANPSHLEAVDPVVMGKTRAEQFYTGDEEGKKVMGILIHGDAAFAGQGVVYETFHL  425 (1017)
T ss_pred             eeeeeccccccccccCCceeEEEEecCchhhcccCceeechHHHHHHhccccccceeEEEEEecchhhccCceEEEeecc
Confidence            99999999999877 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcccEEEEEEcCCcccccCCCCCcccccHHHHHhhcCccEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEe
Q 001713          416 SALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLV  495 (1021)
Q Consensus       416 A~LP~y~~GGvI~Vv~NNq~g~tT~~~~~rs~~~~sd~Aka~g~p~~~VdG~D~eAV~~a~~~A~e~rr~~~gPvlIe~v  495 (1021)
                      +.||+|+|||+||||+||||||||+|+.+||++||+|+||+.++||||||+||||||..+|+.|.|||.+|++||+||++
T Consensus       426 s~LP~YtT~GTvHvVvNNQIgFTTDPR~aRSspYcTDvar~v~aPIFHVNaDD~EAV~~vc~vAAeWR~tFh~DvVVDlV  505 (1017)
T KOG0450|consen  426 SDLPSYTTGGTVHVVVNNQIGFTTDPRFARSSPYCTDVARVVNAPIFHVNADDPEAVMHVCKVAAEWRKTFHKDVVVDLV  505 (1017)
T ss_pred             ccCCCcccCCeEEEEEccccccccCcccccCCCCchhHHHHhCCCeEeecCCChHHHHHHHHHHHHHHHHhccCeEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCCCCCCCCCCHHHHHHHHhCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHchhcCCCc-cchhh
Q 001713          496 CYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNR-RDWLS  574 (1021)
Q Consensus       496 tYR~~GHne~Ddp~ytqp~ey~~i~~~~dpi~~y~~~Li~~Gi~t~ee~~~i~~~~~~~l~~a~~~A~~~~p~~-~~~~~  574 (1021)
                      |||++||||.|+|+||||.||+.|++++++++.|.++|+++|.+|++|+++..+++...+++||+.++++.|.. .+|++
T Consensus       506 cyRR~GHNE~DeP~FTQPlMYk~I~k~~~~l~~Y~ekLl~egtvs~~evd~~~~k~~~I~eeafe~sKd~~~~~~rdWL~  585 (1017)
T KOG0450|consen  506 CYRRHGHNEIDEPMFTQPLMYKQIRKHKPVLQKYAEKLLSEGTVSQQEVDEEIKKYDNILEEAFERSKDYKPLHIRDWLD  585 (1017)
T ss_pred             EEeecCCCcccCccccchHHHHHHHcCCcHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHhhccccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999766 89999


Q ss_pred             hhccCCCCccc---ccccCCCCCChHHHHHHHHhhhcCCCCCCcccchHHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHh
Q 001713          575 AYWSGFKSPEQ---LSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGIDWALGEALAFATLLV  651 (1021)
Q Consensus       575 ~~~~~~~~~~~---~~~~~~t~v~~~~l~~i~~~~~~~P~~f~~h~~l~~~l~~R~~~~~~~~~idw~~AE~lA~~~ll~  651 (1021)
                      .+|.+|.+|+.   .....+|||+.+.|+.||+++.++||+|++|+.|+|+|++|.+|+++ +++|||+||+|||||||.
T Consensus       586 spW~gF~spd~~~~i~~~~~Tgv~~e~L~~ig~~~ss~PE~F~~Hrgl~Ril~~R~~mi~~-~~iDwal~EalAFgsLl~  664 (1017)
T KOG0450|consen  586 SPWPGFFSPDGQPKILPCPSTGVKEEILKHIGKVASSVPEGFKIHRGLKRILKNRAQMIKS-EGVDWALAEALAFGSLLK  664 (1017)
T ss_pred             CCCccccCccCCCccccCCCCCCCHHHHHHHHHhhccCCcccchhhhHHHHHHHHHHhhhh-cccchHHHHHHHHHHHHh
Confidence            99999998742   23366799999999999999999999999999999999999999998 889999999999999999


Q ss_pred             cCCcEEEEcccCCCcccccccceeccCCcC-ceeccCCCcccccCCcccEEecCccchHHHHHHHHhhccCCCCcceEeh
Q 001713          652 EGNHVRLSGQDVERGTFSHRHSVLHDQETG-EQYCPLDHVMMNQDAEMFTVSNSSLSEFGVLGFELGYSMENPNSLVMWE  730 (1021)
Q Consensus       652 ~~~~Vrl~GeDv~rGtF~~RHavl~dq~t~-~~y~pL~~L~~~~~~g~~rV~nspLSE~~vlGfe~G~a~~g~~~lviwE  730 (1021)
                      ||.+||||||||+||||||||+|||||+++ ++|+||++|.  .+|+++.|+||.|||+||||||+||||++|+.|||||
T Consensus       665 EG~hVRlSGQDVERGTFShRH~VLHDQ~~d~~~y~PlnhL~--~~Qa~ytV~NSSLSEygVLGFElGYsm~sPNaLVlWE  742 (1017)
T KOG0450|consen  665 EGIHVRLSGQDVERGTFSHRHHVLHDQEVDKRTYIPLNHLW--PNQAPYTVCNSSLSEYGVLGFELGYSMASPNALVLWE  742 (1017)
T ss_pred             cCceEEeecccccccccccchhhhcccccCcceecchhhcC--CCCCceeeeccchhhhheecceecccccCCCceEEee
Confidence            999999999999999999999999999999 8999999999  8899999999999999999999999999999999999


Q ss_pred             hhhhhhHhhHHHHHHHHHhhhhhhhcCccceEEEeCccCCCCCcCCcCchhhHhhhccCCCCCcccCCCchhhhcccccC
Q 001713          731 AQFGDFANGAQVIFDQFVNSGESKWLRQSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECN  810 (1021)
Q Consensus       731 aqFgDF~n~Aq~~iDqfi~s~~~kw~~~~~lV~~lPhG~~G~GpeHSs~r~Er~Lql~~e~~~~~~~ipg~~~~~~~~~N  810 (1021)
                      ||||||+|+||+||||||++|++||.+++||||+|||||+|+||||||+|+|||||||+|||++||.....+.+|+|+||
T Consensus       743 AQFGDFaNtAQ~IiDQFIssGqaKW~rqsGlVllLPHGyeG~GPEHSSaR~ERfLQm~nddp~~~p~~~~~~~~Ql~dcN  822 (1017)
T KOG0450|consen  743 AQFGDFANTAQCIIDQFISSGQAKWVRQSGLVLLLPHGYEGMGPEHSSARPERFLQMSNDDPDVFPDEEEFLQRQLQDCN  822 (1017)
T ss_pred             hhhccccccchhhHHhHhccchhhhhhhcCeEEEccCCcCCCCcccccccHHHHHHhccCCCccCCcccHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999988766889999999


Q ss_pred             eEEEecCCHHHHHHHHHHHHhcCCCCcEEEEeeccccCCccccCCcccccccCCCCCCCCCCCcceEeecCccccccCCC
Q 001713          811 WQIVNVTTPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNEHSDLEE  890 (1021)
Q Consensus       811 l~Vv~pstpad~fhlLrrqi~~~~~kPliv~~pK~Llr~~~~~s~~~e~~~~~~~~~~~~~~~~f~~vi~~~~~~~~~~~  890 (1021)
                      |+||||||||||||+|||||+++||||||||+||+|||||.|+|+++||.+          |..|+++|++.|++...++
T Consensus       823 w~vvn~tTPaNyfHvLRRQi~~~FRKPliif~pKsLLRHp~arS~~~ef~~----------g~~fq~vi~e~g~~~~~pe  892 (1017)
T KOG0450|consen  823 WQVVNCTTPANYFHVLRRQIHRPFRKPLIIFTPKSLLRHPEARSSFSEFDE----------GTGFQRVIPEDGKAAQNPE  892 (1017)
T ss_pred             eEEEecCChHHHHHHHHHHhhhcccCceEEeccHHhhcCccccCCHHHhcc----------CCCCceeccccccccCChh
Confidence            999999999999999999999999999999999999999999999999986          4689999999999888999


Q ss_pred             CCeEEEEeechhHHHHHHHHHHcC-CCcEEEEEecccCCCCHHHHHHHHHcCCCceEEEEecCCcccchHhhHHHHHHHH
Q 001713          891 GIRRLILCSGKVYYELYEERKKHS-ASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTA  969 (1021)
Q Consensus       891 g~~~~Iv~~Gk~~~~l~~a~~~~~-~~~v~ii~le~L~Pfp~~~i~~~l~k~~~~~~vwvqEe~~n~G~~~~v~~~i~~~  969 (1021)
                      +++++|+|||||||+|.++|++.+ ..+|||+|+|||+|||+++|+++++||||+|+|||||||+|||+|+||.|||.++
T Consensus       893 ~vkrlv~csGkVyydL~k~Rk~~~~~~~vAi~RvEQl~PFp~dli~~e~~~YpnaEivWcQEE~~NmG~w~Yv~PRl~T~  972 (1017)
T KOG0450|consen  893 NVKRLVFCSGKVYYDLTKERKEVGLEGDVAITRVEQLSPFPFDLIQQELNKYPNAEIVWCQEEHKNMGAWDYVEPRLRTA  972 (1017)
T ss_pred             hceEEEEecceEehhhhHHHHhcCcccceeEEEeeccCCCcHHHHHHHHHhCCCceeeehhhhhcccCchhhcchHHHHH
Confidence            999999999999999999999987 5789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCcEEEEcCCCCcCCCcccHHHHHHHHHHHHHHhcCCCCC
Q 001713          970 MKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPI 1017 (1021)
Q Consensus       970 ~~~l~~~~~~~~~~vgr~~~~~pa~g~~~~h~~e~~~i~~~a~~~~~~ 1017 (1021)
                      ++.+.    .+++|+||.++++||||....|..||++++++||+.++.
T Consensus       973 l~~~~----r~v~Y~GR~Psaa~AtGnk~~Hl~eq~~~l~~a~~~~~~ 1016 (1017)
T KOG0450|consen  973 LKRLA----RPVKYAGRLPSAAPATGNKQTHLAEQKAFLNKAFQLDPS 1016 (1017)
T ss_pred             HHhhC----CcceecccCCcccccccchhHHHHHHHHHHHHHhccCCC
Confidence            98775    699999999999999999999999999999999998765

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>PLN02683 pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PRK09212 pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2 Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion] Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] Back     alignment and domain information
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>COG3960 Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1021
2jgd_B933 E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 0.0
2jgd_A933 E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 0.0
2xta_A868 Crystal Structure Of The Suca Domain Of Mycobacteri 0.0
2xt6_A1113 Crystal Structure Of Mycobacterium Smegmatis Alpha- 0.0
2ozl_A365 Human Pyruvate Dehydrogenase S264e Variant Length = 1e-04
1um9_A367 Branched-chain 2-oxo Acid Dehydrogenase (e1) From T 2e-04
3exi_A382 Crystal Structure Of The Pyruvate Dehydrogenase (E1 3e-04
3exe_A382 Crystal Structure Of The Pyruvate Dehydrogenase (E1 3e-04
3exf_A382 Crystal Structure Of The Pyruvate Dehydrogenase (E1 8e-04
>pdb|2JGD|B Chain B, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933 Back     alignment and structure 
Iteration: 1

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/983 (41%), Positives = 568/983 (57%), Gaps = 88/983 (8%)
Query: 62   LTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAATSPGISGQTIQ----- 116
            L  ++L G +  ++E+L   +  DP+SVD +W++ F+   G          QT +     
Sbjct: 10   LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRL 69
Query: 117  ------------------ESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYG 158
                              + +++L L+ AY+  GH  A LDPLGL +++   DLDP+F+ 
Sbjct: 70   AKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHD 129
Query: 159  FTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNW 218
             TEAD    F +G ++        +    L  +L  L+Q YCG IG EYMHI+  E+  W
Sbjct: 130  LTEADFQETFNVGSFA------SGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRW 183
Query: 219  LRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEM 278
            ++ +IE+     +N + ++  L  L  +   E +L  K+  AKRF LEGG+ LIP +KEM
Sbjct: 184  IQQRIESGRAT-FNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEM 242
Query: 279  FDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVK 338
               A + G   +V+GM HRGRLNVL NV+ K  + +F EF+G  +       + GTGDVK
Sbjct: 243  IRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKE------HLGTGDVK 296
Query: 339  YHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIH 398
            YH+G S D  T GG  +HL+L  NPSHLE V PVVIG  RA+    ++    K + + IH
Sbjct: 297  YHMGFSSDFQTDGG-LVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIH 355
Query: 399  GDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTT-DPMSGRSSQYCTDVAKAL 457
            GD +  GQGVV ETL++S    Y +GGT+ IV+NNQV FTT +P+  RS+ YCTD+ K +
Sbjct: 356  GDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMV 415
Query: 458  DAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYK 517
             APIFHVN DD EAVA V  LA ++R TF  DV +DLVCYRR GHNE DEPS TQP MY+
Sbjct: 416  QAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQ 475
Query: 518  IIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYW 577
             I+ HP+  +IY +KL + +  T ED  ++       L        ++ P   +  S  W
Sbjct: 476  KIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRP--MNMHSFTW 533
Query: 578  SGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGID 637
            S + + E      N  V+ + L+ + K I+T+PE  +    V K+Y  R  M    +  D
Sbjct: 534  SPYLNHEWDEEYPNK-VEMKRLQELAKRISTVPEAVEMQSRVAKIYADRQAMAAGEKLFD 592
Query: 638  WALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAE 697
            W   E LA+ATL+ EG  VRLSG+D  RGTF HRH+V+H+Q  G  Y PL H+   Q A 
Sbjct: 593  WGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGA- 651
Query: 698  MFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLR 757
             F V +S LSE  VL FE GY+   P +L +WEAQFGDFANGAQV+ DQF++SGE KW R
Sbjct: 652  -FRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGR 710
Query: 758  QSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVT 817
              GLV++LPHGY+GQGPEHSSARLER+LQ+                    E N Q+   +
Sbjct: 711  MCGLVMLLPHGYEGQGPEHSSARLERYLQL------------------CAEQNMQVCVPS 752
Query: 818  TPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKR 877
            TPA  +H+LRRQ  R  R+PLVVMSPK+LLRH    S+L E  +    P           
Sbjct: 753  TPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAI--------- 803
Query: 878  LIKDQNEHSDLE-EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQR 936
                  E  +L+ +G++R+++CSGKVYY+L E+R+K++  D+AI R+EQL PFP+  +Q 
Sbjct: 804  -----GEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQE 858
Query: 937  ELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTA---MKAVDRGTMEDIKYVGRAPSAAS 992
             L+++ +  + VW QEEP+N GA+       C+     + +  G    ++Y GR  SA+ 
Sbjct: 859  VLQQFAHVKDFVWCQEEPLNQGAW------YCSQHHFREVIPFGA--SLRYAGRPASASP 910
Query: 993  ATGFYQVHVKEQSELMQKAIQPE 1015
            A G+  VH K+Q +L+  A+  E
Sbjct: 911  AVGYMSVHQKQQQDLVNDALNVE 933
>pdb|2JGD|A Chain A, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933 Back     alignment and structure
>pdb|2XTA|A Chain A, Crystal Structure Of The Suca Domain Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase In Complex With Acetyl-Coa (Triclinic Form) Length = 868 Back     alignment and structure
>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113 Back     alignment and structure
>pdb|2OZL|A Chain A, Human Pyruvate Dehydrogenase S264e Variant Length = 365 Back     alignment and structure
>pdb|1UM9|A Chain A, Branched-chain 2-oxo Acid Dehydrogenase (e1) From Thermus Thermophilus Hb8 In Apo-form Length = 367 Back     alignment and structure
>pdb|3EXI|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex With The Subunit-Binding Domain (Sbd) Of E2p, But Sbd Cannot Be Modeled Into The Electron Density Length = 382 Back     alignment and structure
>pdb|3EXE|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Back     alignment and structure
>pdb|3EXF|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1021
2jgd_A933 2-oxoglutarate dehydrogenase E1 component; flavopr 0.0
2xt6_A1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 0.0
2yic_A868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 0.0
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 4e-04
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Length = 933 Back     alignment and structure
 Score = 1513 bits (3920), Expect = 0.0
 Identities = 400/979 (40%), Positives = 558/979 (56%), Gaps = 80/979 (8%)

Query: 62   LTDNFLDGTSSVYLEELQRSWEADPNSVDESWQNFFRNFVGQAA---------------- 105
            L  ++L G +  ++E+L   +  DP+SVD +W++ F+   G                   
Sbjct: 10   LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRL 69

Query: 106  -------TSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYG 158
                   +S      T  + +++L L+ AY+  GH  A LDPLGL +++   DLDP+F+ 
Sbjct: 70   AKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHD 129

Query: 159  FTEADLDREFFLGVWSMAGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNW 218
             TEAD    F +G ++        +    L  +L  L+Q YCG IG EYMHI+  E+  W
Sbjct: 130  LTEADFQETFNVGSFA------SGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRW 183

Query: 219  LRDKIETPTPMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEM 278
            ++ +IE+     +N + ++  L  L  +   E +L  K+  AKRF LEGG+ LIP +KEM
Sbjct: 184  IQQRIESGRA-TFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEM 242

Query: 279  FDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVK 338
               A + G   +V+GM HRGRLNVL NV+ K  + +F EF+G  +         GTGDVK
Sbjct: 243  IRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHL------GTGDVK 296

Query: 339  YHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYSNDMDRTKNMAVLIH 398
            YH+G S D  T  G  +HL+L  NPSHLE V PVVIG  RA+    ++    K + + IH
Sbjct: 297  YHMGFSSDFQT-DGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIH 355

Query: 399  GDGSFAGQGVVYETLHLSALPNYSIGGTIHIVVNNQVAFTT-DPMSGRSSQYCTDVAKAL 457
            GD +  GQGVV ETL++S    Y +GGT+ IV+NNQV FTT +P+  RS+ YCTD+ K +
Sbjct: 356  GDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMV 415

Query: 458  DAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYK 517
             APIFHVN DD EAVA V  LA ++R TF  DV +DLVCYRR GHNE DEPS TQP MY+
Sbjct: 416  QAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQ 475

Query: 518  IIRSHPSSLEIYQNKLLECQHVTQEDINKIQEKVNRILSEEFVASKDYVPNRRDWLSAYW 577
             I+ HP+  +IY +KL + +  T ED  ++       L        ++ P      +  W
Sbjct: 476  KIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFT--W 533

Query: 578  SGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPENFKPHRGVKKVYELRAQMIETGEGID 637
            S + + E         V+ + L+ + K I+T+PE  +    V K+Y  R  M    +  D
Sbjct: 534  SPYLNHEWDEEY-PNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFD 592

Query: 638  WALGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEQYCPLDHVMMNQDAE 697
            W   E LA+ATL+ EG  VRLSG+D  RGTF HRH+V+H+Q  G  Y PL H+   Q   
Sbjct: 593  WGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQ--G 650

Query: 698  MFTVSNSSLSEFGVLGFELGYSMENPNSLVMWEAQFGDFANGAQVIFDQFVNSGESKWLR 757
             F V +S LSE  VL FE GY+   P +L +WEAQFGDFANGAQV+ DQF++SGE KW R
Sbjct: 651  AFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGR 710

Query: 758  QSGLVVMLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDSTLRTQIQECNWQIVNVT 817
              GLV++LPHGY+GQGPEHSSARLER+LQ+  +                   N Q+   +
Sbjct: 711  MCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQ------------------NMQVCVPS 752

Query: 818  TPANYFHVLRRQIHREFRKPLVVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKR 877
            TPA  +H+LRRQ  R  R+PLVVMSPK+LLRH    S+L E  +             F  
Sbjct: 753  TPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAN-----------GTFLP 801

Query: 878  LIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRE 937
             I + +E     +G++R+++CSGKVYY+L E+R+K++  D+AI R+EQL PFP+  +Q  
Sbjct: 802  AIGEIDELDP--KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEV 859

Query: 938  LKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGF 996
            L+++ +  + VW QEEP+N GA+          +          ++Y GR  SA+ A G 
Sbjct: 860  LQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGAS-----LRYAGRPASASPAVGH 914

Query: 997  YQVHVKEQSELMQKAIQPE 1015
              VH K+Q +L+  A+  E
Sbjct: 915  MSVHQKQQQDLVNDALNVE 933
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113 Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Length = 868 Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Length = 365 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Length = 367 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1021
d1umda_362 c.36.1.11 (A:) Branched-chain alpha-keto acid dehy 4e-16
d2bfda1395 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid 3e-11
d1qs0a_407 c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B 4e-11
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Length = 362 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

 Score = 78.8 bits (193), Expect = 4e-16
 Identities = 37/203 (18%), Positives = 71/203 (34%), Gaps = 3/203 (1%)

Query: 371 PVVIGKTRAKQYYSNDMDRTKNMAVLIHGDGSFAGQGVVYETLHLSALPNYSIGGTIHIV 430
           P+      A     +          +         +G  Y  ++ +A+        + I 
Sbjct: 140 PIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAP---AVFIA 196

Query: 431 VNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVAHVCELAAEWRQTFHSDV 490
            NN  A + D      S    D A A   P + V+G D+ A  +V + A E  +      
Sbjct: 197 ENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPS 256

Query: 491 VVDLVCYRRFGHNEIDEPSFTQPKMYKIIRSHPSSLEIYQNKLLECQHVTQEDINKIQEK 550
           +V+L  YR   H+  D+ S  +PK           +  ++  L       +E    ++E+
Sbjct: 257 LVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREE 316

Query: 551 VNRILSEEFVASKDYVPNRRDWL 573
           +   L      +++  P   +W+
Sbjct: 317 IRAELERGLKEAEEAGPVPPEWM 339
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Length = 395 Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Length = 407 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1021
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 100.0
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 100.0
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 100.0
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 100.0
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 100.0
d1w85b1192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal d 100.0
d2bfdb1203 Branched-chain alpha-keto acid dehydrogenase, Pyr 100.0
d2ozlb1192 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 100.0
d1qs0b1204 2-oxoisovalerate dehydrogenase (E1B), Pyr module { 100.0
d1ik6a1191 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 100.0
d1umdb1186 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.97
d2bfdb2138 Branched-chain alpha-keto acid dehydrogenase {Huma 99.74
d1qs0b2134 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseu 99.74
d1ik6a2135 E1-beta subunit of pyruvate dehydrogenase, C-domai 99.7
d1umdb2137 Branched-chain alpha-keto acid dehydrogenase {Ther 99.7
d2ozlb2138 E1-beta subunit of pyruvate dehydrogenase, C-domai 99.7
d1w85b2132 Pyruvate dehydrogenase E1-beta, PdhB, C-terminal d 99.7
d2r8oa2331 Transketolase (TK), PP module {Escherichia coli [T 99.69
d1r9ja2336 Transketolase (TK), PP module {Leishmania mexicana 99.69
d1gpua1335 Transketolase (TK), PP module {Baker's yeast (Sacc 99.64
d1itza1338 Transketolase (TK), PP module {Maize (Zea mays) [T 99.54
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.41
d2ieaa2415 Pyruvate dehydrogenase E1 component, PP module {Es 99.32
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 99.17
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 99.12
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 99.11
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 99.06
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 99.02
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 98.97
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 98.88
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 98.86
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 98.86
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 98.83
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 98.83
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 98.78
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 98.61
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 98.6
d2c42a3157 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 98.51
d2c42a2447 Pyruvate-ferredoxin oxidoreductase, PFOR, domains 97.79
d1gpua3146 Transketolase (TK), C-domain {Baker's yeast (Sacch 96.27
d2r8oa3136 Transketolase (TK), C-domain {Escherichia coli [Ta 96.23
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 93.89
d1r9ja3143 Transketolase (TK), C-domain {Leishmania mexicana 93.89
d1itza3136 Transketolase (TK), C-domain {Maize (Zea mays) [Ta 90.98
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 87.67
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 80.69
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: Branched-chain alpha-keto acid dehydrogenase, PP module
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=0  Score=511.83  Aligned_cols=315  Identities=17%  Similarity=0.174  Sum_probs=291.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHH
Q ss_conf             999999899999999999978999999997407514---44785324889999999976079873998189631799999
Q 001713          228 PMQYNRQRREVILDRLVWSTQFENFLATKWTTAKRF---GLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLG  304 (1021)
Q Consensus       228 ~~~~s~e~~~~il~~m~~ar~fE~~l~~~~~~~Krf---g~eG~Ea~i~gl~~~l~~~~~~gv~D~vigm~HRgrln~La  304 (1021)
                      .+.+|+|+++++|+.|+++|.||+++..+|++++++   ++.||||+++|+..++++.     .|++++ +||+|+++|+
T Consensus        25 ~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~~~al~~~-----~D~~~~-~yR~h~~~la   98 (362)
T d1umda_          25 PLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPG-----FDWVFP-YYRDHGLALA   98 (362)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSCTT-----TSEEEC-CTTTHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC-----CCEEEE-CCCCHHHHHH
T ss_conf             9997999999999999999999999999997799602227897899999999975878-----786873-1341899999


Q ss_pred             HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHC
Q ss_conf             84099999999982099999987775457887534443347898999840244220356876666552313777748730
Q 001713          305 NVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQYYS  384 (1021)
Q Consensus       305 ~v~g~p~~~if~Ef~G~~~~~~~G~~~ggsgDvkyHlg~~~~~~~~~g~~i~l~l~~npShLg~~~PvA~G~A~A~q~~~  384 (1021)
                      +  |.++..+|+|++|+.+|.++|  ++||    +|++ +.+.+          +.+..++||++.|+|+|.|+|.++++
T Consensus        99 ~--G~~~~~~~ae~~gk~~g~~~G--rggs----~H~~-~~~~~----------~~~~~~ivg~~~p~a~G~A~a~k~~~  159 (362)
T d1umda_          99 L--GIPLKELLGQMLATKADPNKG--RQMP----EHPG-SKALN----------FFTVASPIASHVPPAAGAAISMKLLR  159 (362)
T ss_dssp             H--TCCHHHHHHHHHTBTTCTTTT--CSCS----SCCC-BTTTT----------BCCCCSSTTTTHHHHHHHHHHHHHTT
T ss_pred             H--HHHHHHHHHHHHCCCCCCCCC--CCCC----CCCC-CCCCC----------CCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             8--743999999984556898654--3542----1242-12367----------44444422323007777787653034


Q ss_pred             CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC---CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
Q ss_conf             99889875799995753347742799999823---999998552899999198133348988766526888881449549
Q 001713          385 NDMDRTKNMAVLIHGDGSFAGQGVVYETLHLS---ALPNYSIGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPI  461 (1021)
Q Consensus       385 ~d~~~~~~v~i~~~GDgA~sGqG~v~EalnlA---~LP~y~~GGvI~IV~NNqig~tT~~~~~rs~~~~sd~aka~g~p~  461 (1021)
                      ++     .|++|++||||++ ||+|||+||||   +||      +||||+||+||++|+.+.+++..+++++|++||+|+
T Consensus       160 ~~-----~v~v~~~GDGa~~-eG~f~Ealn~A~~~~lP------vifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~~  227 (362)
T d1umda_         160 TG-----QVAVCTFGDGATS-EGDWYAGINFAAVQGAP------AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPG  227 (362)
T ss_dssp             CC-----CCEEEEEETGGGG-SHHHHHHHHHHHHTTCS------EEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCE
T ss_pred             CC-----CEEEEECCCCCCC-CCCHHHHHHHHHHCCCC------EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEEEE
T ss_conf             44-----2356522688656-77349999776433687------036652036664432101114534442223210002


Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCC-CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf             999189999999999999999880599799997200068987899999-8898989999909999999999999836899
Q 001713          462 FHVNGDDMEAVAHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPS-FTQPKMYKIIRSHPSSLEIYQNKLLECQHVT  540 (1021)
Q Consensus       462 ~~VdG~D~~aV~~a~~~A~e~rr~~~~PvlIe~~tYR~~GHne~D~p~-ytqp~~y~~i~~~~dpi~~y~~~Li~~Gi~t  540 (1021)
                      ++|||+|+++|+.+++.|++++|++++|+|||+.|||+.||+++|++. ||++.+.+.|+ .+||+.+|+++|+++|+++
T Consensus       228 ~~vDGnDv~~v~~a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~-~~DPi~~~~~~L~~~g~~s  306 (362)
T d1umda_         228 YLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWN  306 (362)
T ss_dssp             EEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCC
T ss_pred             EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH-CCCHHHHHHHHHHHCCCCC
T ss_conf             674450588999999999999985689789971334335787655202220014667773-2998999999999879999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCHHCC-CCCCCHHHHHCCCC
Q ss_conf             99999999999999999999801049-99521112200599
Q 001713          541 QEDINKIQEKVNRILSEEFVASKDYV-PNRRDWLSAYWSGF  580 (1021)
Q Consensus       541 ~ee~~~i~~~~~~~l~~a~~~A~~~~-p~~~~~~~~~~~~~  580 (1021)
                      ++++++|+++++++|++++++|++.+ |++.+.++++|++.
T Consensus       307 e~e~~~i~~ei~~~V~~a~~~A~~~p~P~~~~l~~~VY~~~  347 (362)
T d1umda_         307 EEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEK  347 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTSSSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
T ss_conf             99999999999999999999998679989899971315799
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2bfdb2 c.48.1.2 (B:205-342) Branched-chain alpha-keto acid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0b2 c.48.1.2 (B:206-339) 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ik6a2 c.48.1.2 (A:192-326) E1-beta subunit of pyruvate dehydrogenase, C-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d2c42a3 c.48.1.3 (A:259-415) Pyruvate-ferredoxin oxidoreductase, PFOR, domain II {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d1gpua3 c.48.1.1 (A:535-680) Transketolase (TK), C-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2r8oa3 c.48.1.1 (A:528-663) Transketolase (TK), C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d1r9ja3 c.48.1.1 (A:527-669) Transketolase (TK), C-domain {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1itza3 c.48.1.1 (A:540-675) Transketolase (TK), C-domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure