Citrus Sinensis ID: 001730

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------102
MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
cccccccccccccccccccccccccEEEEccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHHccccccccccHHHHHHHHccccccEEEccccEEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccHHccHHHHcccHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHcccccccccccccccccccHHHHccEEEEEccccccEEEEEEEccccHHHHHHcHHHHHHHHHcccccccHHHHHHHccccccccccccccccccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHcEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccEEEEccccccEEEEEEccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccccccHHHHHHccccccccc
ccccccEEEccccccccccccccEEEEEEccccEEEEEEcccccccccccccccccccccccccccccccccccccccEcccccccEEEEEccccccHHHEEEEcccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccEEEEEccHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccHHHHcccccccccHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHcccccccccccccccccHHHcccEEEEEEccccEEEEEEEEcccHHHHHccccHHHHHHHHccccccHHHHHHHHcccHHHEEccccccccccccccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHEEccHHHHHHccHHHHHHHHHHcccccEEEEEEEcccccccccccccccccccEEEcccHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEcccccccccEEEEEEEEcccHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHcccEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccHcccccEEEEcccccEEEEEEEcccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHccccHHHHccHHHccEEEEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHcccccccccEEEEEEEEcccccccccccccccEEEccHHHHHHccccccccc
mggngcvwssdeivikspndkrlYRVIELENRLCAllvhdpeiyaddssktlennteedeetfddeyeddeyedeeeddendtekevkgkgifSQTKKAAAAMCVGmgsfcdpvEAQGLAHFLEHMLfmgstefpdeneydsylskhggssnaytetehtcyhFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANvrkgpqikpqftvEGTIWKACKLFRLEAvkdvhildltwtlpclhqEYLKKSEDYLAHLLghegrgslhsflkgrgwatsisagvgdegmhrsSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEfrfaeeqpqdDYAAELAGNlliypaehvIYGEYMYEVWDEEMIKHLLgffmpenmridVVSKSfaksqdfhyepwfgsryteedispslmelwrnppeidvslqlpsqnefiptdfsirandisndlvtvtsptciidepliRFWYKLdntfklprantyfrinlkggydnvknCILTELFIHLLKDELNEIIYQASVAKLETsvsifsdklelkvygfndklPVLLSKILAIAKsflpsddrfKVIKEDVVRTlkntnmkplshssYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLchgnlsqeEAIHISNIFKSifsvqplpiemrHQECVIclpsganlvrnvsvknkcetnSVIEVLYFQIEQEKGMELTRLKALIDLFDEIleepffnqlrtkeqlgyvvecsprvtyrVFGFCFCiqsskynpiyLQERIDNFISGLDELleglddesfENYRSGLMAKLlekdpsltyesNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGcntnikesekhsksALVIKDLTAFKLSSEFYQSLC
mggngcvwssdeivikspndkrLYRVIELENRLCALLVHdpeiyaddssktlennteedeetfddeyeddeyedeeeddendtekevkgkgifsQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRkgpqikpqftveGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAksflpsddrfkVIKEDVVRtlkntnmkplshssYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYlqqwspkcrRLAVRVWGCNTnikesekhsksalvIKDLTAFKLSSEFYQSLC
MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLennteedeetfddeyeddeyedeeeddendteKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISgldelleglddeSFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
*****CVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIY****************************************************KKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEF******************AYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFD**********SIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIK********ALVIKDLTAFKLS********
***************KSPNDKRLYRVIELENRLCALLVHD******************************************************QTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAN*******TVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVR*******************VIKDLTAFKLSSEFYQ***
MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSS***************************************GKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
*****CVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPE**********************************EDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTN********KSALVIKDLTAFKLSSEFYQSLC
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1019 2.2.26 [Sep-21-2011]
O438471150 Nardilysin OS=Homo sapien yes no 0.856 0.759 0.360 1e-159
Q5R4H61152 Nardilysin OS=Pongo abeli no no 0.856 0.757 0.360 1e-159
P355591019 Insulin-degrading enzyme yes no 0.884 0.884 0.339 1e-158
P147351019 Insulin-degrading enzyme no no 0.899 0.899 0.335 1e-157
Q24K021019 Insulin-degrading enzyme no no 0.899 0.899 0.337 1e-157
Q9JHR71019 Insulin-degrading enzyme yes no 0.884 0.884 0.335 1e-156
Q060101027 A-factor-processing enzym yes no 0.898 0.891 0.329 1e-143
O22941970 Zinc-metallopeptidase, pe no no 0.915 0.961 0.314 1e-141
P22817990 Insulin-degrading enzyme yes no 0.877 0.903 0.325 1e-134
O14077969 Putative zinc protease mu yes no 0.877 0.922 0.314 1e-124
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2 Back     alignment and function desciption
 Score =  564 bits (1453), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 323/896 (36%), Positives = 519/896 (57%), Gaps = 23/896 (2%)

Query: 97   KKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTE 156
            K++AAA+CVG+GSF DP +  GLAHFLEHM+FMGS ++PDEN +D++L KHGGS NA T+
Sbjct: 208  KQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTD 267

Query: 157  TEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQ 216
             E T + F+++R++ K AL R++QFFI PLM  +A++REV AVDSE+  A  +DA R + 
Sbjct: 268  CERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEM 327

Query: 217  LQCHTSQLGHAFNKFFWGNKKSLIGAMEK-GINLQEQIMKLYMNYYQGGLMKLVVIGGEP 275
            L    ++ GH   KFFWGN ++L     K  I+   ++ + +M YY    M LVV   E 
Sbjct: 328  LFGSLARPGHPMGKFFWGNAETLKHEPRKNNIDTHARLREFWMRYYSSHYMTLVVQSKET 387

Query: 276  LDTLQSWVVELFANVRKGPQIKPQF---TVEGTIWKACKLFRLEAVKDVHILDLTWTLPC 332
            LDTL+ WV E+F+ +      +P F   T         KL+R+  ++ +H L +TW LP 
Sbjct: 388  LDTLEKWVTEIFSQIPNNGLPRPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPP 447

Query: 333  LHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSI 392
              Q Y  K   Y++ L+GHEG+GS+ SFL+ + WA ++  G G+ G  ++S   +F +SI
Sbjct: 448  QQQHYRVKPLHYISWLVGHEGKGSILSFLRKKCWALALFGGNGETGFEQNSTYSVFSISI 507

Query: 393  HLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAEL 452
             LTD G E  +++   V+QY+K+L+++ P+K IF+E++ I + EF + E+    +Y   +
Sbjct: 508  TLTDEGYEHFYEVAYTVFQYLKMLQKLGPEKRIFEEIRKIEDNEFHYQEQTDPVEYVENM 567

Query: 453  AGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWF 512
              N+ +YP + ++ G+ +   +  E+I   L   +P+   + ++S +     D   E WF
Sbjct: 568  CENMQLYPLQDILTGDQLLFEYKPEVIGEALNQLVPQKANLVLLSGANEGKCDLK-EKWF 626

Query: 513  GSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCI 572
            G++Y+ EDI  S  ELW +  E++  L LP++N++I TDF+++A D          P  I
Sbjct: 627  GTQYSIEDIENSWAELWNSNFELNPDLHLPAENKYIATDFTLKAFDCPE----TEYPVKI 682

Query: 573  IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQA 632
            ++ P    WYK DN FK+P+A   F +       +  N +L ++F+++L   L E  Y+A
Sbjct: 683  VNTPQGCLWYKKDNKFKIPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEA 742

Query: 633  SVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLK 692
             VA+LE  +      L ++V GFN KLP+L   I+     F  +   F +I E + +T  
Sbjct: 743  DVAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLAEFNSTPAVFTMITEQLKKTYF 802

Query: 693  NTNMKPLSHSSYLRLQVLCQSFYD-VDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHG 751
            N  +KP + +  +RL +L  + +  +D+  +++ GLSL  L++F+ E +SQL++EGL  G
Sbjct: 803  NILIKPETLAKDVRLLILEYARWSMIDKYQALMDGLSLESLLSFVKEFKSQLFVEGLVQG 862

Query: 752  NLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEV 811
            N++  E++          + +PL  EM  Q  V+ LPSG +L + V   NK + NS + V
Sbjct: 863  NVTSTESMDFLKYVVDKLNFKPLEQEMPVQFQVVELPSGHHLCK-VKALNKGDANSEVTV 921

Query: 812  LYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCF 871
             Y     + G    R   L++L    +EEP F+ LRTK+ LGY V  + R T  + GF  
Sbjct: 922  YY-----QSGTRSLREYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSV 976

Query: 872  CI--QSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLE-KDPSLTYES 928
             +  Q++KYN   + ++I+ F+S  +E +E L +E+F    + L+ KL E +D  L  E 
Sbjct: 977  TVGTQATKYNSEVVDKKIEEFLSSFEEKIENLTEEAFNTQVTALI-KLKECEDTHLGEEV 1035

Query: 929  NRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWG 984
            +R WN++  ++Y+FD+   E E LKS  K+D+++W+K +     P  + L+V V G
Sbjct: 1036 DRNWNEVVTQQYLFDRLAHEIEALKSFSKSDLVNWFKAHR---GPGSKMLSVHVVG 1088
Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 6EC: 1
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1 Back     alignment and function description
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4 Back     alignment and function description
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1 Back     alignment and function description
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE23 PE=1 SV=2 Back     alignment and function description
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1 Back     alignment and function description
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1 SV=4 Back     alignment and function description
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug138 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1019
2241247321023 predicted protein [Populus trichocarpa] 0.987 0.983 0.751 0.0
3565694631030 PREDICTED: insulin-degrading enzyme-like 0.998 0.987 0.734 0.0
2254343431045 PREDICTED: insulin-degrading enzyme-like 0.913 0.890 0.778 0.0
2977457661062 unnamed protein product [Vitis vinifera] 0.913 0.876 0.778 0.0
4494657791022 PREDICTED: insulin-degrading enzyme-like 0.996 0.993 0.707 0.0
4495174051022 PREDICTED: LOW QUALITY PROTEIN: insulin- 0.996 0.993 0.706 0.0
1453352001024 putative N-arginine dibasic convertase [ 0.996 0.991 0.698 0.0
1107384831061 hypothetical protein [Arabidopsis thalia 0.996 0.956 0.698 0.0
2978489661024 metalloendopeptidase [Arabidopsis lyrata 0.996 0.991 0.695 0.0
75236931039 Putative N-arginine dibasic convertase [ 0.994 0.974 0.669 0.0
>gi|224124732|ref|XP_002319408.1| predicted protein [Populus trichocarpa] gi|222857784|gb|EEE95331.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1558 bits (4035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 772/1027 (75%), Positives = 876/1027 (85%), Gaps = 21/1027 (2%)

Query: 6    CVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYAD---DSSKTLENNTEEDEET 62
            CV  SD++VIKSPNDKRLYRVIELEN LCALLVHDPEIY D   D S T+E    + EE 
Sbjct: 5    CVSRSDDVVIKSPNDKRLYRVIELENGLCALLVHDPEIYPDGVPDESGTVEYRENDVEEE 64

Query: 63   FDDEYEDDEYEDEEEDDENDTEKEVKGKGIFS----------QTKKAAAAMCVGMGSFCD 112
             DD+ EDD+ E+++E+ E + E+E +                QTKKAAAAMCV MGSF D
Sbjct: 65   EDDDDEDDDEEEDDEEGEEEEEEEEEENSEGEEEKGKGGASLQTKKAAAAMCVAMGSFSD 124

Query: 113  PVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLK 172
            P EAQGLAHFLEHMLFMGS EFPDENE       HGGSSNAYTE EHTCYHFE+KREFLK
Sbjct: 125  PAEAQGLAHFLEHMLFMGSEEFPDENE-------HGGSSNAYTEAEHTCYHFEVKREFLK 177

Query: 173  GALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFF 232
            GAL RFSQFF+SPLMK EAMEREVLAVDSEFNQ LQ+DACRLQQLQCHTS  GH FN+F 
Sbjct: 178  GALRRFSQFFVSPLMKSEAMEREVLAVDSEFNQVLQSDACRLQQLQCHTSGPGHPFNRFS 237

Query: 233  WGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRK 292
            WGNKKSL+ AMEKGINL+E I+KLY +YY GGLMKLVVIGGEPLD L+SWV ELFA VRK
Sbjct: 238  WGNKKSLVDAMEKGINLREHILKLYRDYYHGGLMKLVVIGGEPLDVLESWVTELFAKVRK 297

Query: 293  GPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHE 352
            GPQ KP+F VEG IWKA  L+RLEAVKDV+ILDLTWTLPCLHQ+YLKKSEDYLAHLLGHE
Sbjct: 298  GPQTKPKFQVEGPIWKAGLLYRLEAVKDVNILDLTWTLPCLHQDYLKKSEDYLAHLLGHE 357

Query: 353  GRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQY 412
            G+GSLHSFLK RG ATS+SAGVGDEGMHRSS+AYIF MSIHLTD GLEKIFDIIGFVYQY
Sbjct: 358  GKGSLHSFLKARGLATSLSAGVGDEGMHRSSLAYIFGMSIHLTDYGLEKIFDIIGFVYQY 417

Query: 413  IKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYE 472
            +KLLR+V PQ+WIFKELQDIGNMEFRFAEEQPQDDYAAELA NLL++PAE+VIY +Y+Y+
Sbjct: 418  LKLLREVPPQQWIFKELQDIGNMEFRFAEEQPQDDYAAELAENLLVFPAENVIYCDYVYK 477

Query: 473  VWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNP 532
            +WDE+ IKHLL FF PENMRIDVVSK   KSQD   EPWFGS Y EE I PSL+E+WR+P
Sbjct: 478  IWDEKAIKHLLQFFTPENMRIDVVSKPSVKSQDLQCEPWFGSSYIEEAIPPSLIEIWRDP 537

Query: 533  PEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPR 592
             E+DVSL +PS+NEF+P+DFSIRA+++ +DLV  + P CIIDEPL++FWYKLD+TFK+PR
Sbjct: 538  SEVDVSLHMPSKNEFVPSDFSIRADNLDHDLVNASFPRCIIDEPLMKFWYKLDSTFKVPR 597

Query: 593  ANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKV 652
            ANTYFRI LK GY ++K+ ++TELFI LLKDELNEIIYQASVAKLETS+S+ SDKLELKV
Sbjct: 598  ANTYFRIYLKDGYASMKSFLMTELFILLLKDELNEIIYQASVAKLETSISLVSDKLELKV 657

Query: 653  YGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ 712
            YGFN+KLP LLSK+L IAKSFLPSDDRFKVIKED+ R LKN NMKPLSHSSYLRLQVLC+
Sbjct: 658  YGFNEKLPALLSKVLVIAKSFLPSDDRFKVIKEDLERNLKNANMKPLSHSSYLRLQVLCK 717

Query: 713  SFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ 772
            SFYDV+EK  +L  LSLADL AFIPELRSQLYIE LCHGNL QEEAI++SNI ++  SVQ
Sbjct: 718  SFYDVEEKQCVLSDLSLADLNAFIPELRSQLYIEALCHGNLLQEEAINLSNIIRNNLSVQ 777

Query: 773  PLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALID 832
            PLP+ MRH+E VICLPS ANLVR+V+VKNK ETNSV+E LYFQIE E G++  +LKAL D
Sbjct: 778  PLPVNMRHEEHVICLPSSANLVRDVNVKNKSETNSVVE-LYFQIEPEVGLDSIKLKALAD 836

Query: 833  LFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFIS 892
            LFDEI+EEP FNQLRTKEQLGYVVECSPRVTYR+ GFCF +QSSKYNP+YL  RI+NFI+
Sbjct: 837  LFDEIVEEPLFNQLRTKEQLGYVVECSPRVTYRINGFCFIVQSSKYNPVYLLGRIENFIN 896

Query: 893  GLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDL 952
            GL+ELLEGLDD SFENY+SGL+AKLLEKDPSL YE+NR WNQITDKRY+FD S KEAE L
Sbjct: 897  GLEELLEGLDDASFENYKSGLVAKLLEKDPSLQYETNRLWNQITDKRYVFDSSLKEAEKL 956

Query: 953  KSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSS 1012
            KSI K+DVI+W++TYLQQ SPKCRRL +R+WGCN ++KE E    S  VI D+TAFK+SS
Sbjct: 957  KSIHKSDVINWFRTYLQQSSPKCRRLTIRLWGCNIDLKEVETRPDSEQVITDITAFKVSS 1016

Query: 1013 EFYQSLC 1019
            E+Y SLC
Sbjct: 1017 EYYPSLC 1023

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356569463|ref|XP_003552920.1| PREDICTED: insulin-degrading enzyme-like [Glycine max] Back     alignment and taxonomy information
>gi|225434343|ref|XP_002276484.1| PREDICTED: insulin-degrading enzyme-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745766|emb|CBI15822.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449465779|ref|XP_004150605.1| PREDICTED: insulin-degrading enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449517405|ref|XP_004165736.1| PREDICTED: LOW QUALITY PROTEIN: insulin-degrading enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|145335200|ref|NP_172173.2| putative N-arginine dibasic convertase [Arabidopsis thaliana] gi|332189930|gb|AEE28051.1| putative N-arginine dibasic convertase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110738483|dbj|BAF01167.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297848966|ref|XP_002892364.1| metalloendopeptidase [Arabidopsis lyrata subsp. lyrata] gi|297338206|gb|EFH68623.1| metalloendopeptidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|7523693|gb|AAF63132.1|AC011001_2 Putative N-arginine dibasic convertase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1019
TAIR|locus:20330821024 AT1G06900 [Arabidopsis thalian 0.986 0.981 0.686 0.0
ZFIN|ZDB-GENE-070410-85998 ide "insulin-degrading enzyme" 0.849 0.867 0.367 8.1e-153
RGD|28611019 Ide "insulin degrading enzyme" 0.849 0.849 0.364 8.1e-153
UNIPROTKB|O438471150 NRD1 "Nardilysin" [Homo sapien 0.876 0.776 0.353 1.3e-152
UNIPROTKB|B1AKJ51219 NRD1 "Nardilysin" [Homo sapien 0.879 0.735 0.352 3.5e-152
RGD|32101161 Nrd1 "nardilysin 1" [Rattus no 0.854 0.750 0.357 3.5e-152
UNIPROTKB|P472451161 Nrd1 "Nardilysin" [Rattus norv 0.854 0.750 0.357 3.5e-152
UNIPROTKB|Q24K021019 IDE "Insulin-degrading enzyme" 0.849 0.849 0.364 5.7e-152
UNIPROTKB|F1SC98990 IDE "Uncharacterized protein" 0.849 0.874 0.363 5.7e-152
UNIPROTKB|P147351019 IDE "Insulin-degrading enzyme" 0.849 0.849 0.363 9.3e-152
TAIR|locus:2033082 AT1G06900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3691 (1304.4 bits), Expect = 0., P = 0.
 Identities = 699/1018 (68%), Positives = 822/1018 (80%)

Query:    11 DEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYAD---------DSSKTLXXXXXXXXX 61
             D +V+KSPND+RLYRVIELEN LCALL+HDP+IY +         D              
Sbjct:    11 DNVVVKSPNDRRLYRVIELENGLCALLIHDPDIYPEGSVPDQIDEDDEDGEEEDSDGSSE 70

Query:    62 XXXXXXXXXXXXXXXXXXXXXXXKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAH 121
                                     EVKGKG   QTKKAAAAMCV MGSF DP EAQGLAH
Sbjct:    71 DDDDDEDDEEDGEGDEEDEDEDEDEVKGKGDH-QTKKAAAAMCVSMGSFLDPPEAQGLAH 129

Query:   122 FLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQF 181
             FLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTE EHTCYHFE+KREFL+GAL RFSQF
Sbjct:   130 FLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTEMEHTCYHFEVKREFLQGALKRFSQF 189

Query:   182 FISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG 241
             F++PLMK EAMEREVLAVDSEFNQALQNDACRLQQLQC+TS  GH FN+F WGNKKSL G
Sbjct:   190 FVAPLMKTEAMEREVLAVDSEFNQALQNDACRLQQLQCYTSAKGHPFNRFAWGNKKSLSG 249

Query:   242 AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFT 301
             AME G++L+E I+KLY  YY GGLMKLVVIGGE LD L+SWVVELF +V+ G +I+P   
Sbjct:   250 AMENGVDLRECIVKLYKEYYHGGLMKLVVIGGESLDMLESWVVELFGDVKNGSKIRPTLE 309

Query:   302 VEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFL 361
              EG IWK  KL+RLEAVKDVHILDLTWTLP L   Y+KK EDYLAHLLGHEGRGSLHSFL
Sbjct:   310 AEGPIWKGGKLYRLEAVKDVHILDLTWTLPPLRSAYVKKPEDYLAHLLGHEGRGSLHSFL 369

Query:   362 KGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSP 421
             K +GWATS+SAGVGD+G++RSS+AY+F MSIHLTDSGLEKI+DIIG++YQY+KLLR VSP
Sbjct:   370 KAKGWATSLSAGVGDDGINRSSLAYVFGMSIHLTDSGLEKIYDIIGYIYQYLKLLRDVSP 429

Query:   422 QKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKH 481
             Q+WIFKELQDIGNM+FRFAEEQP DDYAAEL+ N+L YP EHVIYG+Y+Y+ WD ++I+ 
Sbjct:   430 QEWIFKELQDIGNMDFRFAEEQPADDYAAELSENMLAYPVEHVIYGDYVYQTWDPKLIED 489

Query:   482 LLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQL 541
             L+GFF P+NMRIDVVSKS  KS++F  EPWFGS Y EED+  SLME W NP E+D SL L
Sbjct:   490 LMGFFTPQNMRIDVVSKSI-KSEEFQQEPWFGSSYIEEDVPLSLMESWSNPSEVDNSLHL 548

Query:   542 PSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINL 601
             PS+N+FIP DFSIRA +   D  + + P CIIDEP ++FWYKLD TFK+PRANTYFRINL
Sbjct:   549 PSKNQFIPCDFSIRAINSDVDPKSQSPPRCIIDEPFMKFWYKLDETFKVPRANTYFRINL 608

Query:   602 KGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPV 661
             KG Y +VKNC+LTEL+I+LLKDELNEIIYQAS+AKLETS+S++ DKLELKVYGFN+K+P 
Sbjct:   609 KGAYASVKNCLLTELYINLLKDELNEIIYQASIAKLETSLSMYGDKLELKVYGFNEKIPA 668

Query:   662 LLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKL 721
             LLSKILAIAKSF+P+ +RFKVIKE++ R  +NTNMKPL+HS+YLRLQ+LC+  YD DEKL
Sbjct:   669 LLSKILAIAKSFMPNLERFKVIKENMERGFRNTNMKPLNHSTYLRLQLLCKRIYDSDEKL 728

Query:   722 SILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQ 781
             S+L+ LSL DL +FIPELRSQ++IE LCHGNLS++EA++ISNIFK   +V+PLP + RH 
Sbjct:   729 SVLNDLSLDDLNSFIPELRSQIFIEALCHGNLSEDEAVNISNIFKDSLTVEPLPSKCRHG 788

Query:   782 ECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEP 841
             E + C P GA LVR+V+VKNK ETNSV+E LY+QIE E+    TR KA++DLF EI+EEP
Sbjct:   789 EQITCFPMGAKLVRDVNVKNKSETNSVVE-LYYQIEPEEAQS-TRTKAVLDLFHEIIEEP 846

Query:   842 FFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISXXXXXXXXX 901
              FNQLRTKEQLGYVVEC PR+TYRV GFCFC+QSSKY P++L  R+DNFI          
Sbjct:   847 LFNQLRTKEQLGYVVECGPRLTYRVHGFCFCVQSSKYGPVHLLGRVDNFIKDIEGLLEQL 906

Query:   902 XXXSFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVI 961
                S+E+YRSG++A+LLEKDPSL  E+N  W+QI DKRYMFD S KEAE+L+SI+K DVI
Sbjct:   907 DDESYEDYRSGMIARLLEKDPSLLSETNDLWSQIVDKRYMFDFSHKEAEELRSIQKKDVI 966

Query:   962 SWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC 1019
             SWYKTY ++ SPKCRRLAVRVWGC+TN+KE++   K+  VI D  AFK +S+FY SLC
Sbjct:   967 SWYKTYFRESSPKCRRLAVRVWGCDTNMKETQTDQKAVQVIADAVAFKSTSKFYPSLC 1024
GO:0003824 "catalytic activity" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
ZFIN|ZDB-GENE-070410-85 ide "insulin-degrading enzyme" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|2861 Ide "insulin degrading enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O43847 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B1AKJ5 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|3210 Nrd1 "nardilysin 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P47245 Nrd1 "Nardilysin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q24K02 IDE "Insulin-degrading enzyme" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SC98 IDE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P14735 IDE "Insulin-degrading enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P22817IDE_DROME3, ., 4, ., 2, 4, ., 5, 60.32550.87730.9030yesno
Q06010STE23_YEAST3, ., 4, ., 2, 4, ., -0.32930.89890.8919yesno
Q9JHR7IDE_MOUSE3, ., 4, ., 2, 4, ., 5, 60.33560.88420.8842yesno
P35559IDE_RAT3, ., 4, ., 2, 4, ., 5, 60.33960.88420.8842yesno
O14077MU138_SCHPO3, ., 4, ., 2, 4, ., -0.31410.87730.9226yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.240.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00131241
hypothetical protein (1023 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1019
COG1025937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 0.0
PRK15101961 PRK15101, PRK15101, protease3; Provisional 1e-104
TIGR02110696 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis 9e-32
pfam00675149 pfam00675, Peptidase_M16, Insulinase (Peptidase fa 9e-30
COG0612438 COG0612, PqqL, Predicted Zn-dependent peptidases [ 5e-21
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 2e-17
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 2e-07
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 5e-04
TIGR02110696 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis 0.003
COG1026978 COG1026, COG1026, Predicted Zn-dependent peptidase 0.004
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  596 bits (1538), Expect = 0.0
 Identities = 292/967 (30%), Positives = 472/967 (48%), Gaps = 95/967 (9%)

Query: 12  EIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDE 71
             + K   D R YR I+L N L ALLV DP                              
Sbjct: 12  LTIHKPALDDRKYRAIKLPNGLRALLVSDP------------------------------ 41

Query: 72  YEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGS 131
                                  Q  K++AA+ V +GSF DP E  GLAHFLEHMLFMGS
Sbjct: 42  -----------------------QADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGS 78

Query: 132 TEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEA 191
            ++PDE  +  +LSKHGGS NA T  E T ++FE++ + L+GAL RF+ FFI PL   EA
Sbjct: 79  EKYPDEGGFSEFLSKHGGSHNASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEA 138

Query: 192 MEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQE 251
           ++RE  AV+SEF   L +D  R+ Q+Q  T+  GH  +KF  GN ++L  + + G+ +Q+
Sbjct: 139 LDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETL--SDKPGLVVQQ 196

Query: 252 QIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANV----RKGPQIK-PQFTVEGTI 306
           ++ + +  +Y    MKLV+ G +PLD L     +LF ++    RK P I  P  T E T 
Sbjct: 197 ELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTG 256

Query: 307 WKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGW 366
               K+  +   K    L + + +     ++  K ++YL+HL+G+E  GSL ++LK +G 
Sbjct: 257 ----KIIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGL 312

Query: 367 ATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIF 426
            T +SAG+       S    +F +S  LTD GL     +I   +QY+ LLR+    K+ F
Sbjct: 313 ITELSAGLD----PISGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTF 368

Query: 427 KELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFF 486
            ELQ++ +++FR+  +    DY + LA N+   P EH +Y   +   +D + I+  L   
Sbjct: 369 DELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERLALM 428

Query: 487 MPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNE 546
            PEN R+ ++SK     +      ++G  Y  +D +   ++ W+   +  + L LP  N 
Sbjct: 429 TPENARLWLISKLEEHDKA---AYFYGFPYQVDDYTAQPLDAWQQKADS-IELSLPEPNP 484

Query: 547 FIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFK-LPRANTYFRINLKGGY 605
           FIP D S+  ++        T P  + ++P +R WY  ++ F   P+A+    I      
Sbjct: 485 FIPDDVSLIKSE-----KKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHAS 539

Query: 606 DNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSK 665
            + +N +LTEL+ +L  D L+++ YQAS+A L  S++  S+ L+L + GF  +LP LL  
Sbjct: 540 RSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRA 599

Query: 666 ILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSIL 724
            L    S    +DRF+  K  +   LKN    KP   +      +L   ++  +E+ + L
Sbjct: 600 FLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPYWSREERRNAL 659

Query: 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECV 784
             +S+ +  AF   L + +++E L  GNL++ +A        ++       +        
Sbjct: 660 ESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADA-------TNLAETLQKKLPAIGSTWY 712

Query: 785 ICLPSGANLVRNVSVKNKC-ETNSVIEVLYF--QIEQEKGMELTRLKALIDLFDEILEEP 841
                          +    E++S    + +  Q ++ K   L+       L  +++   
Sbjct: 713 RNPSVYLLKGGTRIFETVGGESDSANAAILYPQQYDEIKSSALSS------LLGQLIHPW 766

Query: 842 FFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGL 901
           FF+QLRTKEQLGY V   PR   R  G  F +QS+  +P YL ERI+ F+   +  L  +
Sbjct: 767 FFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELREM 826

Query: 902 DDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVI 961
            +E FE  +  L+ ++L+   +L  E++R W         FD  +K+ E +K++ K  ++
Sbjct: 827 SEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLL 886

Query: 962 SWYKTYL 968
            +++  L
Sbjct: 887 DFFENAL 893

Length = 937
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information
>gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) Back     alignment and domain information
>gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1019
KOG0959974 consensus N-arginine dibasic convertase NRD1 and r 100.0
COG1025937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
PRK15101961 protease3; Provisional 100.0
PTZ004321119 falcilysin; Provisional 100.0
TIGR02110696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 100.0
COG1026978 Predicted Zn-dependent peptidases, insulinase-like 100.0
KOG2019998 consensus Metalloendoprotease HMP1 (insulinase sup 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
KOG0960467 consensus Mitochondrial processing peptidase, beta 100.0
KOG09611022 consensus Predicted Zn2+-dependent endopeptidase, 100.0
KOG2067472 consensus Mitochondrial processing peptidase, alph 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
KOG2583429 consensus Ubiquinol cytochrome c reductase, subuni 99.93
PRK15101961 protease3; Provisional 99.93
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 99.91
KOG0960467 consensus Mitochondrial processing peptidase, beta 99.9
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 99.88
KOG2067472 consensus Mitochondrial processing peptidase, alph 99.86
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.8
PTZ00432 1119 falcilysin; Provisional 99.8
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.64
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 99.3
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 99.22
KOG2583429 consensus Ubiquinol cytochrome c reductase, subuni 99.09
KOG2019 998 consensus Metalloendoprotease HMP1 (insulinase sup 99.05
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 99.02
KOG0961 1022 consensus Predicted Zn2+-dependent endopeptidase, 98.63
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 98.57
PF03410590 Peptidase_M44: Protein G1; InterPro: IPR005072 In 98.09
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 97.97
PHA03081595 putative metalloprotease; Provisional 97.93
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 94.57
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=7.5e-121  Score=1053.34  Aligned_cols=946  Identities=42%  Similarity=0.703  Sum_probs=871.3

Q ss_pred             CCCCCCccccCCccccCcCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccc
Q 001730            1 MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDE   80 (1019)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (1019)
                      |.|+..+.--+..+.|++.|.|.||+++|+|||+|++++||..              +                      
T Consensus         5 ~~~~~~~~~~~~~~~k~~~d~r~yr~~~L~Ngl~alLisDp~t--------------D----------------------   48 (974)
T KOG0959|consen    5 MSGNIVLKREDVSIVKSLGDTREYRGIELTNGLRALLISDPKT--------------D----------------------   48 (974)
T ss_pred             cccchhhhhcccccccCCCCccceeEEEecCCceEEEecCCCC--------------C----------------------
Confidence            5566777777777999999999999999999999999999987              6                      


Q ss_pred             cchhhhhcccccccccceeEEEEEeCCCCCCCCCCCCCchHHHHHhhccCCcCCCCccHHHHHHHhcCCcceeeeCCCce
Q 001730           81 NDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHT  160 (1019)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t  160 (1019)
                                       ++++++.|++||+.||.+.+|||||+|||+|+||+|||.++.+.++|.++||+.||+|+.++|
T Consensus        49 -----------------~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~e~T  111 (974)
T KOG0959|consen   49 -----------------KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDSEHT  111 (974)
T ss_pred             -----------------ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccccccc
Confidence                             899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeChhhHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCCCcCCcCchhcch
Q 001730          161 CYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLI  240 (1019)
Q Consensus       161 ~~~~~~~~~~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~  240 (1019)
                      +|+|.+..++|+.+|++|+++|.+|+|.+++++||+.+|.+|++++.+++.|+.+++.+.++.|+|||++|.+||.++|.
T Consensus       112 ~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~  191 (974)
T KOG0959|consen  112 NYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLL  191 (974)
T ss_pred             eEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCccHHHHHHHHHHhccCCCCcEEEEEcCCCHHHHHHHHHHHcccccCCCCCCCCccccccccc---cceEEEEEe
Q 001730          241 GAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEA  317 (1019)
Q Consensus       241 ~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  317 (1019)
                      ..-+.+ -+++.|++||++||++++|++||+|+.+++.++.++.+.|+.+++...+.|.+.  .+|+.   .++.+.+.+
T Consensus       192 ~~p~~~-~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~--~~p~~~e~~~~~~~v~p  268 (974)
T KOG0959|consen  192 EGPREI-DLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFP--EPPFLPEELKKLVRVVP  268 (974)
T ss_pred             hccccc-hHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCccc--CCCCChHHhCcEEEEEe
Confidence            522212 569999999999999999999999999999999999999999999888887773  33333   567788889


Q ss_pred             ccccceEEEEEecCCCchhhhcChHHHHHHHhcCCCCCcHHHHHHhcCccccccccccCCCCCCcccceEEEEEEEeChh
Q 001730          318 VKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDS  397 (1019)
Q Consensus       318 ~~~~~~v~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~~~L~~~Lr~~gl~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~  397 (1019)
                      .++...+.|.|++|+....|+..+.+++++++|++++|+|..+|+.+||+.++.++......+++    .|.|.+.+++.
T Consensus       269 ik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~----~f~v~idLtd~  344 (974)
T KOG0959|consen  269 IKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYS----FFNVSIDLTDE  344 (974)
T ss_pred             ccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccc----eEEEEEEeccc
Confidence            99999999999999999889999999999999999999999999999999999988876554554    99999999999


Q ss_pred             hhhcHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhcccceecccCCChHHHHHHHHHhccCCCccccccccccccCCCHH
Q 001730          398 GLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEE  477 (1019)
Q Consensus       398 g~~~~~~v~~~i~~~l~~l~~~~~~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~e  477 (1019)
                      |.+++++++..++++|+.++..|..++.+++...+-...|.++.+.++++.+..++.+++.+|+.+++.+...+..++++
T Consensus       345 G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p~  424 (974)
T KOG0959|consen  345 GLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDPD  424 (974)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcChH
Confidence            99999999999999999999999999999999999999999999889999999999999999999999999999999999


Q ss_pred             HHHHHHhccCcCceEEEEEeCCCCCCCCccccceeccccccccCChhHHHhhcCCCCCCCCcCCCCCCCCCCCCceeccc
Q 001730          478 MIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAN  557 (1019)
Q Consensus       478 ~i~~~~~~l~~~~~~i~i~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~fip~~~~l~~~  557 (1019)
                      .|+.++..|.|.|+++++++..+ .+.++..|+|||+.|.+++||+++++.|.+..+ +..+.||.+|.|||++|++...
T Consensus       425 ~i~~~~~~L~p~n~~v~~~s~~~-~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~-~~~l~lP~~nefI~t~f~~~~~  502 (974)
T KOG0959|consen  425 LIQEVLSSLVPSNMRVILVSRSF-EGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHL-NPELHLPTPNEFIPTDFSILPA  502 (974)
T ss_pred             HHHHHHHhcCcccceeeeeeecc-ccccccccceeccccccccCCHHHHHHhhccCc-cccccCCCCCcccccccccccc
Confidence            99999999999999999999888 567899999999999999999999999966655 6889999999999999999876


Q ss_pred             CCCCCCCCCCCCeEeeccCCceEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHhhhhcCc
Q 001730          558 DISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKL  637 (1019)
Q Consensus       558 ~~~~~~~~~~~P~~i~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~l~~l~~~~l~~~l~e~~~~~~~~g~  637 (1019)
                      +...    ..+|.++++++..++||++|+.|+.|++.+.+.+.+|....++.+.+++.+|..++.+.+.++.|.|..||+
T Consensus       503 ~~~~----~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aGl  578 (974)
T KOG0959|consen  503 PIPK----LEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAGL  578 (974)
T ss_pred             cCcc----ccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhccc
Confidence            6532    358999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhccc-ChhhHHHHHHHHhhcCCCCC
Q 001730          638 ETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYD  716 (1019)
Q Consensus       638 ~~~~~~~~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~  716 (1019)
                      .++++.+..|+.++++||+++++.++..+.+.|.+..+++++|+.+|+.+.+++++... +|+.+|.+.+..++.+..|+
T Consensus       579 ~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~  658 (974)
T KOG0959|consen  579 TYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWS  658 (974)
T ss_pred             eEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccc
Confidence            99999999999999999999999999999999999999999999999999999999554 59999999999999999999


Q ss_pred             HHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCC-----CCCccccccceeEECCCCC
Q 001730          717 VDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ-----PLPIEMRHQECVICLPSGA  791 (1019)
Q Consensus       717 ~~~~~~~l~~it~~dl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  791 (1019)
                      ....++.++.++++++..|...++++.+++++|+||++.++|.++++.+.+.++..     |....+....+.+.+|.|.
T Consensus       659 ~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G~  738 (974)
T KOG0959|consen  659 KEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNGD  738 (974)
T ss_pred             hHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceeccCCc
Confidence            99999999999999999999999999999999999999999999998888888322     2111234556677888888


Q ss_pred             eEEEEecccCCCCccceeEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEE
Q 001730          792 NLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCF  871 (1019)
Q Consensus       792 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~lss~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~  871 (1019)
                      .+++... .+..+.|+++. .++|+    +..+..+.+.+.++.+++..++|+.||+|+||||.|+++.....|..++.+
T Consensus       739 ~~~~~~~-~n~~~~ns~i~-~~~Q~----~~~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i  812 (974)
T KOG0959|consen  739 YYFYRHL-LNKTDDNSCIE-VYYQI----GVQDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQI  812 (974)
T ss_pred             eEEEEcc-cccCCCCceEE-EEEEc----ccchhHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeecCcceeEE
Confidence            8875443 67788999999 99998    788999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCChhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCchHHHHHH
Q 001730          872 CIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAED  951 (1019)
Q Consensus       872 ~v~s~~~~~~~~~~~i~~~l~~~~~~~~~ise~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~  951 (1019)
                      .||+. ++++.++.+|+.|++.+.+.+..|++++|+..+.+++......+.++.....++|.+|..+.|.|++.++.++.
T Consensus       813 ~Vqs~-~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~  891 (974)
T KOG0959|consen  813 TVQSE-KSVDYLEERIESFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEA  891 (974)
T ss_pred             EEccC-CCchHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHH
Confidence            99999 99999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcchhhc---c-c---cCcceecChHHHhhcCcccccCC
Q 001730          952 LKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEK---H-S---KSALVIKDLTAFKLSSEFYQSLC 1019 (1019)
Q Consensus       952 i~~vt~edv~~~~~~~l~p~~~~~~~~~v~v~G~~~~~~~~~~---~-~---~~~~~~~~~~~~~~~~~~~~~~~ 1019 (1019)
                      ++.+|++|+..++..++..++..++++++.+.|+....+...-   . .   ....-|.|++.|++.+++||..+
T Consensus       892 l~~i~k~~~i~~f~~~~~~~a~~~~~lsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~d~~~fk~~~~l~~~~~  966 (974)
T KOG0959|consen  892 LKKITKEDVINFFDEYIRKGAAKRKKLSVHVHGKQLDEEASSEKIKSQSENLLKIKEITDIVAFKRSLPLYPLVK  966 (974)
T ss_pred             HHhhhHHHHHHHHHhhccccchhcceEEEEecCchhhhhhhcccchhhhhhcccccchHHHHHhhcccccccccc
Confidence            9999999999999999999999999999999998754331111   1 0   01122789999999999999863

>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PHA03081 putative metalloprotease; Provisional Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1019
3cww_A990 Crystal Structure Of Ide-Bradykinin Complex Length 1e-162
3qz2_A990 The Structure Of Cysteine-Free Human Insulin Degrad 1e-161
3e4a_A1019 Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut 1e-161
2wby_A990 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-161
3e4z_A990 Crystal Structure Of Human Insulin Degrading Enzyme 1e-160
3hgz_A969 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-159
3p7l_A978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 1e-157
3tuv_A1019 Crystal Structure Of Insulysin With Bound Atp Lengt 1e-156
3p7o_A1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 1e-155
2g47_A990 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-155
2jg4_A990 Substrate-Free Ide Structure In Its Closed Conforma 1e-155
1q2l_A939 Crystal Structure Of Pitrilysin Length = 939 1e-77
3hdi_A421 Crystal Structure Of Bacillus Halodurans Metallo Pe 5e-11
3eoq_A406 The Crystal Structure Of Putative Zinc Protease Bet 4e-08
1hr6_B443 Yeast Mitochondrial Processing Peptidase Length = 4 1e-07
1hr7_B443 Yeast Mitochondrial Processing Peptidase Beta-E73q 2e-07
3amj_C437 The Crystal Structure Of The Heterodimer Of M16b Pe 1e-06
3ami_A445 The Crystal Structure Of The M16b Metallopeptidase 2e-06
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 Back     alignment and structure 
Iteration: 1

 Score =  568 bits (1463), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 349/1025 (34%), Positives = 538/1025 (52%), Gaps = 108/1025 (10%)
Query: 14   VIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLXXXXXXXXXXXXXXXXXXXXX 73
            + KSP DKR YR +EL N +  LL+ DP                                
Sbjct: 25   ITKSPEDKREYRGLELANGIKVLLISDP-------------------------------- 52
Query: 74   XXXXXXXXXXXKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTE 133
                                  T K++AA+ V +GS  DP    GL+HFL+HMLF+G+ +
Sbjct: 53   ---------------------TTDKSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKK 91
Query: 134  FPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEAME 193
            +P ENEY  +LS+H GSSNA+T  EHT Y+F++  E L+GAL RF+QFF+SPL    A +
Sbjct: 92   YPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLSPLFDESAKD 151
Query: 194  REVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSL-IGAMEKGINLQEQ 252
            REV AVDSE  + + NDA RL QL+  T    H F+KF  GNK +L     ++GI+++++
Sbjct: 152  REVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQE 211
Query: 253  IMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACK- 311
            ++K +  YY   LM +VV+G E LD L + VV+LF+ V       P+F       +  K 
Sbjct: 212  LLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQ 271
Query: 312  LFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSIS 371
            L+++  +KD+  L +T+ +P L + Y      YL HL+GHEG GSL S LK +GW  ++ 
Sbjct: 272  LYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLV 331
Query: 372  AG--VGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKEL 429
             G   G  G         F++++ LT+ GL  + DII  ++QYI+ LR   PQ+W+F+EL
Sbjct: 332  GGQKAGARGF------MFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQEL 385
Query: 430  QDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPE 489
            +D+  + FRF +++    Y +++AG L  YP E V+  EY+ E +  ++I+ +L    PE
Sbjct: 386  KDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPE 445
Query: 490  NMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIP 549
            N+R+ +VSKSF    D   E W+G++Y +E I  +++  W+N   ++   +LP++NEFIP
Sbjct: 446  NVRVAIVSKSFEGKTD-RTEEWYGTQYKQEAIPDAVIAKWQN-AALNGKFKLPTKNEFIP 503
Query: 550  TDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVK 609
            T+F I    +  +      P  I D  + + W+K D+ F LP+AN  F       Y +  
Sbjct: 504  TNFEI----LPLEAAATPYPALIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPL 559
Query: 610  NCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAI 669
            +  +  L++ LLKD LNE  Y A +A L   +      + L V G+NDK P+LL KI+  
Sbjct: 560  HSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEK 619
Query: 670  AKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSILHGLS 728
              +F   + RF++IKE  +R+L N    +P  H+ Y    ++ +  +  DE    L  ++
Sbjct: 620  MATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALADVT 679
Query: 729  LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLP 788
            L  L AFIP+L S+L+IE L HGN++++ A+ I  + +           + H      LP
Sbjct: 680  LPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTL--------IEHAHTKPLLP 731
Query: 789  SGANLVRNVSV----------KNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEIL 838
            S     R V +          +N+   NS IE+ Y     +  M+ T     ++LF +I+
Sbjct: 732  SQLAAYREVQLPDRGWFVYQQRNEVHNNSGIEIYY-----QTDMQSTSENMFLELFAQII 786
Query: 839  EEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISXXXXXX 898
             EP FN LRTKEQLGY+V   PR    + G  F IQS K  P YL+ R++ F+       
Sbjct: 787  SEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEK-PPHYLESRVEAFLITMEKSI 845
Query: 899  XXXXXXSFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKN 958
                  +F+ +   L  + L+K   L+ ES ++W +I  ++Y FD+   E   LK++ K 
Sbjct: 846  EDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTKA 905
Query: 959  DVISWYKTYLQQWSPKCRRLAVRVWG----CNTNIKESEKHSKSAL----------VIKD 1004
            D+I +YK  L   +P+  +++V V       N  + E    +   L          VI++
Sbjct: 906  DIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQN 965
Query: 1005 LTAFK 1009
            +TAFK
Sbjct: 966  MTAFK 970
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 Back     alignment and structure
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 Back     alignment and structure
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 Back     alignment and structure
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 Back     alignment and structure
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 Back     alignment and structure
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure
>pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase Length = 421 Back     alignment and structure
>pdb|3EOQ|A Chain A, The Crystal Structure Of Putative Zinc Protease Beta- Subunit From Thermus Thermophilus Hb8 Length = 406 Back     alignment and structure
>pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443 Back     alignment and structure
>pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant Length = 443 Back     alignment and structure
>pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 437 Back     alignment and structure
>pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase Subunit From Sphingomonas Sp. A1 Length = 445 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1019
3cww_A990 Insulysin, insulin-degrading enzyme, insulinase; A 0.0
1q2l_A939 Protease III; hydrolase; 2.20A {Escherichia coli s 0.0
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 2e-21
3go9_A492 Insulinase family protease; IDP00573, structural g 2e-20
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 1e-14
2fge_A995 Atprep2;, zinc metalloprotease (insulinase family) 6e-14
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 7e-14
3eoq_A406 Putative zinc protease; two similar domains of bet 5e-13
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 1e-12
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 5e-12
3gwb_A434 Peptidase M16 inactive domain family protein; pept 7e-12
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 1e-11
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 2e-11
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 6e-11
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 4e-10
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 2e-08
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 5e-08
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
 Score =  772 bits (1994), Expect = 0.0
 Identities = 344/1030 (33%), Positives = 539/1030 (52%), Gaps = 92/1030 (8%)

Query: 7    VWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDE 66
            +      + KSP DKR YR +EL N +  LL+ DP                         
Sbjct: 18   IKRIGNHITKSPEDKREYRGLELANGIKVLLISDP------------------------- 52

Query: 67   YEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHM 126
                                         T K++AA+ V +GS  DP    GL+HFL+HM
Sbjct: 53   ----------------------------TTDKSSAALDVHIGSLSDPPNIAGLSHFLQHM 84

Query: 127  LFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPL 186
            LF+G+ ++P ENEY  +LS+H GSSNA+T  EHT Y+F++  E L+GAL RF+QFF+SPL
Sbjct: 85   LFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLSPL 144

Query: 187  MKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG-AMEK 245
                A +REV AVDSE  + + NDA RL QL+  T    H F+KF  GNK +L     ++
Sbjct: 145  FDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQE 204

Query: 246  GINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGT 305
            GI+++++++K +  YY   LM +VV+G E LD L + VV+LF+ V       P+F     
Sbjct: 205  GIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPF 264

Query: 306  IWKAC-KLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGR 364
              +   +L+++  +KD+  L +T+ +P L + Y      YL HL+GHEG GSL S LK +
Sbjct: 265  QEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSK 324

Query: 365  GWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKW 424
            GW  ++  G              F++++ LT+ GL  + DII  ++QYI+ LR   PQ+W
Sbjct: 325  GWVNTLVGGQKAGARGFM----FFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEW 380

Query: 425  IFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLG 484
            +F+EL+D+  + FRF +++    Y +++AG L  YP E V+  EY+ E +  ++I+ +L 
Sbjct: 381  VFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLD 440

Query: 485  FFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQ 544
               PEN+R+ +VSKSF    D   E W+G++Y +E I  +++  W+N        +LP++
Sbjct: 441  KLRPENVRVAIVSKSFEGKTD-RTEEWYGTQYKQEAIPDAVIAKWQNAALNG-KFKLPTK 498

Query: 545  NEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGG 604
            NEFIPT+F I   + +           I D  + + W+K D+ F LP+AN  F       
Sbjct: 499  NEFIPTNFEILPLEAAATPYPA----LIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFA 554

Query: 605  YDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLS 664
            Y +  +  +  L++ LLKD LNE  Y A +A L   +      + L V G+NDK P+LL 
Sbjct: 555  YVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLK 614

Query: 665  KILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSI 723
            KI+    +F   + RF++IKE  +R+L N    +P  H+ Y    ++ +  +  DE    
Sbjct: 615  KIIEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEA 674

Query: 724  LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIF----SVQPLPIEMR 779
            L  ++L  L AFIP+L S+L+IE L HGN++++ A+ I  + +         +PL     
Sbjct: 675  LADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQL 734

Query: 780  HQECVICLPSGANLVRNVSVKNKCETNSVIEVLYFQIEQEKGMELTRLKALIDLFDEILE 839
                 + LP     V     +N+   NS IE+ Y+Q      M+ T     ++LF +I+ 
Sbjct: 735  AAYREVQLPDRGWFV--YQQRNEVHNNSGIEI-YYQT----DMQSTSENMFLELFAQIIS 787

Query: 840  EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLE 899
            EP FN LRTKEQLGY+V   PR    + G  F IQS K  P YL+ R++ F+  +++ +E
Sbjct: 788  EPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEK-PPHYLESRVEAFLITMEKSIE 846

Query: 900  GLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKND 959
             + +E+F+ +   L  + L+K   L+ ES ++W +I  ++Y FD+   E   LK++ K D
Sbjct: 847  DMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTKAD 906

Query: 960  VISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEK--------------HSKSALVIKDL 1005
            +I +YK  L   +P+  +++V V     +                          VI+++
Sbjct: 907  IIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQNM 966

Query: 1006 TAFKLSSEFY 1015
            TAFK     +
Sbjct: 967  TAFKRGLPLF 976
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1019
d1q2la3240 d.185.1.1 (A:264-503) Protease III {Escherichia co 2e-61
d1q2la2228 d.185.1.1 (A:733-960) Protease III {Escherichia co 5e-42
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 1e-24
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 2e-09
d1q2la4240 d.185.1.1 (A:24-263) Protease III {Escherichia col 2e-24
d2fgea4257 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 2e-21
d3cx5b1202 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 5e-18
d1ppja1232 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 7e-17
d3cx5a1213 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 2e-15
d1hr6b1222 d.185.1.1 (B:24-245) Mitochondrial processing pept 5e-15
d1ppjb1219 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 1e-11
d1hr6a1220 d.185.1.1 (A:14-233) Mitochondrial processing pept 3e-09
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score =  207 bits (527), Expect = 2e-61
 Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 7/232 (3%)

Query: 311 KLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSI 370
            +          +L + + +     ++  K+++ + +L+G+   G+L  +L+ +G    I
Sbjct: 14  IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGI 73

Query: 371 SAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQ 430
           SA         S +     +S  LTD GL     ++  ++ Y+ LLR+    K  F EL 
Sbjct: 74  SANSDPIVNGNSGV---LAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELA 130

Query: 431 DIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPEN 490
           ++ +++FR+       DY   LA  ++  P EH +    + + +D + +K  L    P+N
Sbjct: 131 NVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQN 190

Query: 491 MRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLP 542
            RI  +S     ++      +  + Y  + IS      W+     D++L LP
Sbjct: 191 ARIWYISPKEPHNKT---AYFVDAPYQVDKISAQTFADWQK-KAADIALSLP 238
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Length = 228 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1019
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 100.0
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 100.0
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 100.0
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 100.0
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 100.0
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 100.0
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 100.0
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 100.0
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 100.0
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 100.0
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 100.0
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.91
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.87
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.87
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 99.85
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.84
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.84
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.83
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 99.83
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.83
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.83
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.82
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 99.8
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 99.79
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.79
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.76
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.75
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.73
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.68
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.6
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 99.5
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 99.48
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 99.47
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 99.11
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 98.85
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 98.74
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 97.78
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 94.91
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 94.36
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 92.34
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-45  Score=298.66  Aligned_cols=236  Identities=35%  Similarity=0.525  Sum_probs=220.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             44468863369686456217893689889999679999787754335897655334467456653355433444401121
Q 001730            7 VWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKE   86 (1019)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~L~Ngl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (1019)
                      ..+..+++.|+..|.+.|+.++|+|||+|++++++..              +                            
T Consensus         4 ~~~~~~~~~k~~~d~~~~~~~~L~NGl~V~~~~~~~~--------------~----------------------------   41 (240)
T d1q2la4           4 WQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQA--------------V----------------------------   41 (240)
T ss_dssp             EEECCSCCCCCTTCCCEEEEEEETTSCEEEEEECTTC--------------S----------------------------
T ss_pred             CEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC--------------C----------------------------
T ss_conf             3183014779988874428999289999999997999--------------8----------------------------


Q ss_pred             HCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEE
Q ss_conf             01456555444258999927778889999998349998760059767999007999999549961056479925999982
Q 001730           87 VKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEI  166 (1019)
Q Consensus        87 ~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahllehllf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~d~t~~~~~~  166 (1019)
                                 .+.+++++.+|+.+||++..|+||+++||+++|+.+++....+.+.++..|+.+||+|+.++|.|++++
T Consensus        42 -----------~v~~~l~~~~Gs~~e~~~~~Gla~ll~~ll~~gt~~~~~~~~~~~~~~~~g~~~na~~~~~~t~~~~~~  110 (240)
T d1q2la4          42 -----------KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEV  110 (240)
T ss_dssp             -----------SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEEEEE
T ss_pred             -----------EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEEECCC
T ss_conf             -----------799999996774210234578899999844215675203579999999729702012222211442034


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCC
Q ss_conf             92229999999996100789992579999989999998501997999999998308999999867767533000042059
Q 001730          167 KREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKG  246 (1019)
Q Consensus       167 ~~~~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~  246 (1019)
                      ++++++.+|+++++++.+|.|+++++++++..+.+|++...+++...+.+.+..++|++||++++..|+.+++....  .
T Consensus       111 ~~~~l~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~~~--~  188 (240)
T d1q2la4         111 ENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKP--G  188 (240)
T ss_dssp             CGGGHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCCHHHHSCBT--T
T ss_pred             CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH--H
T ss_conf             55322220145567750975104443246666665565400016888988999983246765445888700577765--3


Q ss_pred             CCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             128999999998206878709999849999999999998702445898889
Q 001730          247 INLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK  297 (1019)
Q Consensus       247 ~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~  297 (1019)
                      .++.+++++||++||+|+||+|+|+|++++++++++++++||.||++..+.
T Consensus       189 ~~~~~~l~~f~~~~y~p~n~~l~i~G~~~~~~l~~~i~~~fg~lp~~~~~~  239 (240)
T d1q2la4         189 NPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKK  239 (240)
T ss_dssp             BCHHHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCC
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             566999999999707847579999828999999999999860899899997
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure