Citrus Sinensis ID: 001753
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1018 | ||||||
| 224124732 | 1023 | predicted protein [Populus trichocarpa] | 0.988 | 0.983 | 0.752 | 0.0 | |
| 356569463 | 1030 | PREDICTED: insulin-degrading enzyme-like | 0.999 | 0.987 | 0.735 | 0.0 | |
| 225434343 | 1045 | PREDICTED: insulin-degrading enzyme-like | 0.914 | 0.890 | 0.778 | 0.0 | |
| 297745766 | 1062 | unnamed protein product [Vitis vinifera] | 0.914 | 0.876 | 0.778 | 0.0 | |
| 449465779 | 1022 | PREDICTED: insulin-degrading enzyme-like | 0.997 | 0.993 | 0.708 | 0.0 | |
| 449517405 | 1022 | PREDICTED: LOW QUALITY PROTEIN: insulin- | 0.997 | 0.993 | 0.707 | 0.0 | |
| 145335200 | 1024 | putative N-arginine dibasic convertase [ | 0.997 | 0.991 | 0.699 | 0.0 | |
| 110738483 | 1061 | hypothetical protein [Arabidopsis thalia | 0.997 | 0.956 | 0.699 | 0.0 | |
| 297848966 | 1024 | metalloendopeptidase [Arabidopsis lyrata | 0.997 | 0.991 | 0.696 | 0.0 | |
| 7523693 | 1039 | Putative N-arginine dibasic convertase [ | 0.995 | 0.974 | 0.670 | 0.0 |
| >gi|224124732|ref|XP_002319408.1| predicted protein [Populus trichocarpa] gi|222857784|gb|EEE95331.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1563 bits (4048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/1026 (75%), Positives = 876/1026 (85%), Gaps = 20/1026 (1%)
Query: 6 CVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYAD---DSSKTLENNTEEDEET 62
CV SD++VIKSPNDKRLYRVIELEN LCALLVHDPEIY D D S T+E + EE
Sbjct: 5 CVSRSDDVVIKSPNDKRLYRVIELENGLCALLVHDPEIYPDGVPDESGTVEYRENDVEEE 64
Query: 63 FDDEYEDDEYEDEEEDDENDTEKEVKGKGIFS----------QTKKAAAAMCVGMGSFCD 112
DD+ EDD+ E+++E+ E + E+E + QTKKAAAAMCV MGSF D
Sbjct: 65 EDDDDEDDDEEEDDEEGEEEEEEEEEENSEGEEEKGKGGASLQTKKAAAAMCVAMGSFSD 124
Query: 113 PVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLK 172
P EAQGLAHFLEHMLFMGS EFPDENE HGGSSNAYTE EHTCYHFE+KREFLK
Sbjct: 125 PAEAQGLAHFLEHMLFMGSEEFPDENE-------HGGSSNAYTEAEHTCYHFEVKREFLK 177
Query: 173 GALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFF 232
GAL RFSQFF+SPLMK EAMEREVLAVDSEFNQ LQ+DACRLQQLQCHTS GH FN+F
Sbjct: 178 GALRRFSQFFVSPLMKSEAMEREVLAVDSEFNQVLQSDACRLQQLQCHTSGPGHPFNRFS 237
Query: 233 WGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRK 292
WGNKKSL+ AMEKGINL+E I+KLY +YY GGLMKLVVIGGEPLD L+SWV ELFA VRK
Sbjct: 238 WGNKKSLVDAMEKGINLREHILKLYRDYYHGGLMKLVVIGGEPLDVLESWVTELFAKVRK 297
Query: 293 GPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHE 352
GPQ KP+F VEG IWKA L+RLEAVKDV+ILDLTWTLPCLHQ+YLKKSEDYLAHLLGHE
Sbjct: 298 GPQTKPKFQVEGPIWKAGLLYRLEAVKDVNILDLTWTLPCLHQDYLKKSEDYLAHLLGHE 357
Query: 353 GRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQY 412
G+GSLHSFLK RG ATS+SAGVGDEGMHRSS+AYIF MSIHLTD GLEKIFDIIGFVYQY
Sbjct: 358 GKGSLHSFLKARGLATSLSAGVGDEGMHRSSLAYIFGMSIHLTDYGLEKIFDIIGFVYQY 417
Query: 413 IKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYE 472
+KLLR+V PQ+WIFKELQDIGNMEFRFAEEQPQDDYAAELA NLL++PAE+VIY +Y+Y+
Sbjct: 418 LKLLREVPPQQWIFKELQDIGNMEFRFAEEQPQDDYAAELAENLLVFPAENVIYCDYVYK 477
Query: 473 VWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNP 532
+WDE+ IKHLL FF PENMRIDVVSK KSQD EPWFGS Y EE I PSL+E+WR+P
Sbjct: 478 IWDEKAIKHLLQFFTPENMRIDVVSKPSVKSQDLQCEPWFGSSYIEEAIPPSLIEIWRDP 537
Query: 533 PEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPR 592
E+DVSL +PS+NEF+P+DFSIRA+++ +DLV + P CIIDEPL++FWYKLD+TFK+PR
Sbjct: 538 SEVDVSLHMPSKNEFVPSDFSIRADNLDHDLVNASFPRCIIDEPLMKFWYKLDSTFKVPR 597
Query: 593 ANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKV 652
ANTYFRI LK GY ++K+ ++TELFI LLKDELNEIIYQASVAKLETS+S+ SDKLELKV
Sbjct: 598 ANTYFRIYLKDGYASMKSFLMTELFILLLKDELNEIIYQASVAKLETSISLVSDKLELKV 657
Query: 653 YGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ 712
YGFN+KLP LLSK+L IAKSFLPSDDRFKVIKED+ R LKN NMKPLSHSSYLRLQVLC+
Sbjct: 658 YGFNEKLPALLSKVLVIAKSFLPSDDRFKVIKEDLERNLKNANMKPLSHSSYLRLQVLCK 717
Query: 713 SFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ 772
SFYDV+EK +L LSLADL AFIPELRSQLYIE LCHGNL QEEAI++SNI ++ SVQ
Sbjct: 718 SFYDVEEKQCVLSDLSLADLNAFIPELRSQLYIEALCHGNLLQEEAINLSNIIRNNLSVQ 777
Query: 773 PLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDL 832
PLP+ MRH+E VICLPS ANLVR+V+VKNK ETNSV+ELYFQIE E G++ +LKAL DL
Sbjct: 778 PLPVNMRHEEHVICLPSSANLVRDVNVKNKSETNSVVELYFQIEPEVGLDSIKLKALADL 837
Query: 833 FDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISG 892
FDEI+EEP FNQLRTKEQLGYVVECSPRVTYR+ GFCF +QSSKYNP+YL RI+NFI+G
Sbjct: 838 FDEIVEEPLFNQLRTKEQLGYVVECSPRVTYRINGFCFIVQSSKYNPVYLLGRIENFING 897
Query: 893 LDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLK 952
L+ELLEGLDD SFENY+SGL+AKLLEKDPSL YE+NR WNQITDKRY+FD S KEAE LK
Sbjct: 898 LEELLEGLDDASFENYKSGLVAKLLEKDPSLQYETNRLWNQITDKRYVFDSSLKEAEKLK 957
Query: 953 SIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSE 1012
SI K+DVI+W++TYLQQ SPKCRRL +R+WGCN ++KE E S VI D+TAFK+SSE
Sbjct: 958 SIHKSDVINWFRTYLQQSSPKCRRLTIRLWGCNIDLKEVETRPDSEQVITDITAFKVSSE 1017
Query: 1013 FYQSLC 1018
+Y SLC
Sbjct: 1018 YYPSLC 1023
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356569463|ref|XP_003552920.1| PREDICTED: insulin-degrading enzyme-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225434343|ref|XP_002276484.1| PREDICTED: insulin-degrading enzyme-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297745766|emb|CBI15822.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449465779|ref|XP_004150605.1| PREDICTED: insulin-degrading enzyme-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449517405|ref|XP_004165736.1| PREDICTED: LOW QUALITY PROTEIN: insulin-degrading enzyme-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|145335200|ref|NP_172173.2| putative N-arginine dibasic convertase [Arabidopsis thaliana] gi|332189930|gb|AEE28051.1| putative N-arginine dibasic convertase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|110738483|dbj|BAF01167.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297848966|ref|XP_002892364.1| metalloendopeptidase [Arabidopsis lyrata subsp. lyrata] gi|297338206|gb|EFH68623.1| metalloendopeptidase [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|7523693|gb|AAF63132.1|AC011001_2 Putative N-arginine dibasic convertase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1018 | ||||||
| TAIR|locus:2033082 | 1024 | AT1G06900 [Arabidopsis thalian | 0.987 | 0.981 | 0.687 | 0.0 | |
| ZFIN|ZDB-GENE-070410-85 | 998 | ide "insulin-degrading enzyme" | 0.850 | 0.867 | 0.368 | 1.2e-153 | |
| RGD|2861 | 1019 | Ide "insulin degrading enzyme" | 0.850 | 0.849 | 0.364 | 1.2e-153 | |
| UNIPROTKB|O43847 | 1150 | NRD1 "Nardilysin" [Homo sapien | 0.877 | 0.776 | 0.353 | 3.1e-153 | |
| UNIPROTKB|Q24K02 | 1019 | IDE "Insulin-degrading enzyme" | 0.850 | 0.849 | 0.364 | 8.1e-153 | |
| UNIPROTKB|B1AKJ5 | 1219 | NRD1 "Nardilysin" [Homo sapien | 0.880 | 0.735 | 0.352 | 8.1e-153 | |
| RGD|3210 | 1161 | Nrd1 "nardilysin 1" [Rattus no | 0.855 | 0.750 | 0.357 | 8.1e-153 | |
| UNIPROTKB|P47245 | 1161 | Nrd1 "Nardilysin" [Rattus norv | 0.855 | 0.750 | 0.357 | 8.1e-153 | |
| UNIPROTKB|F1SC98 | 990 | IDE "Uncharacterized protein" | 0.850 | 0.874 | 0.363 | 8.1e-153 | |
| UNIPROTKB|P14735 | 1019 | IDE "Insulin-degrading enzyme" | 0.850 | 0.849 | 0.363 | 1.3e-152 |
| TAIR|locus:2033082 AT1G06900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3700 (1307.5 bits), Expect = 0., P = 0.
Identities = 699/1017 (68%), Positives = 822/1017 (80%)
Query: 11 DEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYAD---------DSSKTLXXXXXXXXX 61
D +V+KSPND+RLYRVIELEN LCALL+HDP+IY + D
Sbjct: 11 DNVVVKSPNDRRLYRVIELENGLCALLIHDPDIYPEGSVPDQIDEDDEDGEEEDSDGSSE 70
Query: 62 XXXXXXXXXXXXXXXXXXXXXXXKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAH 121
EVKGKG QTKKAAAAMCV MGSF DP EAQGLAH
Sbjct: 71 DDDDDEDDEEDGEGDEEDEDEDEDEVKGKGDH-QTKKAAAAMCVSMGSFLDPPEAQGLAH 129
Query: 122 FLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQF 181
FLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTE EHTCYHFE+KREFL+GAL RFSQF
Sbjct: 130 FLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTEMEHTCYHFEVKREFLQGALKRFSQF 189
Query: 182 FISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG 241
F++PLMK EAMEREVLAVDSEFNQALQNDACRLQQLQC+TS GH FN+F WGNKKSL G
Sbjct: 190 FVAPLMKTEAMEREVLAVDSEFNQALQNDACRLQQLQCYTSAKGHPFNRFAWGNKKSLSG 249
Query: 242 AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFT 301
AME G++L+E I+KLY YY GGLMKLVVIGGE LD L+SWVVELF +V+ G +I+P
Sbjct: 250 AMENGVDLRECIVKLYKEYYHGGLMKLVVIGGESLDMLESWVVELFGDVKNGSKIRPTLE 309
Query: 302 VEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFL 361
EG IWK KL+RLEAVKDVHILDLTWTLP L Y+KK EDYLAHLLGHEGRGSLHSFL
Sbjct: 310 AEGPIWKGGKLYRLEAVKDVHILDLTWTLPPLRSAYVKKPEDYLAHLLGHEGRGSLHSFL 369
Query: 362 KGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSP 421
K +GWATS+SAGVGD+G++RSS+AY+F MSIHLTDSGLEKI+DIIG++YQY+KLLR VSP
Sbjct: 370 KAKGWATSLSAGVGDDGINRSSLAYVFGMSIHLTDSGLEKIYDIIGYIYQYLKLLRDVSP 429
Query: 422 QKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKH 481
Q+WIFKELQDIGNM+FRFAEEQP DDYAAEL+ N+L YP EHVIYG+Y+Y+ WD ++I+
Sbjct: 430 QEWIFKELQDIGNMDFRFAEEQPADDYAAELSENMLAYPVEHVIYGDYVYQTWDPKLIED 489
Query: 482 LLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQL 541
L+GFF P+NMRIDVVSKS KS++F EPWFGS Y EED+ SLME W NP E+D SL L
Sbjct: 490 LMGFFTPQNMRIDVVSKSI-KSEEFQQEPWFGSSYIEEDVPLSLMESWSNPSEVDNSLHL 548
Query: 542 PSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINL 601
PS+N+FIP DFSIRA + D + + P CIIDEP ++FWYKLD TFK+PRANTYFRINL
Sbjct: 549 PSKNQFIPCDFSIRAINSDVDPKSQSPPRCIIDEPFMKFWYKLDETFKVPRANTYFRINL 608
Query: 602 KGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPV 661
KG Y +VKNC+LTEL+I+LLKDELNEIIYQAS+AKLETS+S++ DKLELKVYGFN+K+P
Sbjct: 609 KGAYASVKNCLLTELYINLLKDELNEIIYQASIAKLETSLSMYGDKLELKVYGFNEKIPA 668
Query: 662 LLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKL 721
LLSKILAIAKSF+P+ +RFKVIKE++ R +NTNMKPL+HS+YLRLQ+LC+ YD DEKL
Sbjct: 669 LLSKILAIAKSFMPNLERFKVIKENMERGFRNTNMKPLNHSTYLRLQLLCKRIYDSDEKL 728
Query: 722 SILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQ 781
S+L+ LSL DL +FIPELRSQ++IE LCHGNLS++EA++ISNIFK +V+PLP + RH
Sbjct: 729 SVLNDLSLDDLNSFIPELRSQIFIEALCHGNLSEDEAVNISNIFKDSLTVEPLPSKCRHG 788
Query: 782 ECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPF 841
E + C P GA LVR+V+VKNK ETNSV+ELY+QIE E+ TR KA++DLF EI+EEP
Sbjct: 789 EQITCFPMGAKLVRDVNVKNKSETNSVVELYYQIEPEEAQS-TRTKAVLDLFHEIIEEPL 847
Query: 842 FNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISXXXXXXXXXX 901
FNQLRTKEQLGYVVEC PR+TYRV GFCFC+QSSKY P++L R+DNFI
Sbjct: 848 FNQLRTKEQLGYVVECGPRLTYRVHGFCFCVQSSKYGPVHLLGRVDNFIKDIEGLLEQLD 907
Query: 902 XXSFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVIS 961
S+E+YRSG++A+LLEKDPSL E+N W+QI DKRYMFD S KEAE+L+SI+K DVIS
Sbjct: 908 DESYEDYRSGMIARLLEKDPSLLSETNDLWSQIVDKRYMFDFSHKEAEELRSIQKKDVIS 967
Query: 962 WYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC 1018
WYKTY ++ SPKCRRLAVRVWGC+TN+KE++ K+ VI D AFK +S+FY SLC
Sbjct: 968 WYKTYFRESSPKCRRLAVRVWGCDTNMKETQTDQKAVQVIADAVAFKSTSKFYPSLC 1024
|
|
| ZFIN|ZDB-GENE-070410-85 ide "insulin-degrading enzyme" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| RGD|2861 Ide "insulin degrading enzyme" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O43847 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q24K02 IDE "Insulin-degrading enzyme" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B1AKJ5 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|3210 Nrd1 "nardilysin 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P47245 Nrd1 "Nardilysin" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SC98 IDE "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P14735 IDE "Insulin-degrading enzyme" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1018 | |||
| COG1025 | 937 | COG1025, Ptr, Secreted/periplasmic Zn-dependent pe | 0.0 | |
| PRK15101 | 961 | PRK15101, PRK15101, protease3; Provisional | 1e-103 | |
| TIGR02110 | 696 | TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis | 9e-32 | |
| pfam00675 | 149 | pfam00675, Peptidase_M16, Insulinase (Peptidase fa | 9e-30 | |
| COG0612 | 438 | COG0612, PqqL, Predicted Zn-dependent peptidases [ | 5e-21 | |
| pfam05193 | 182 | pfam05193, Peptidase_M16_C, Peptidase M16 inactive | 2e-17 | |
| pfam05193 | 182 | pfam05193, Peptidase_M16_C, Peptidase M16 inactive | 4e-08 | |
| pfam03066 | 146 | pfam03066, Nucleoplasmin, Nucleoplasmin | 5e-04 | |
| TIGR02110 | 696 | TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis | 0.003 | |
| COG1026 | 978 | COG1026, COG1026, Predicted Zn-dependent peptidase | 0.004 |
| >gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 294/967 (30%), Positives = 471/967 (48%), Gaps = 96/967 (9%)
Query: 12 EIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDE 71
+ K D R YR I+L N L ALLV DP
Sbjct: 12 LTIHKPALDDRKYRAIKLPNGLRALLVSDP------------------------------ 41
Query: 72 YEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGS 131
Q K++AA+ V +GSF DP E GLAHFLEHMLFMGS
Sbjct: 42 -----------------------QADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGS 78
Query: 132 TEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPLMKVEA 191
++PDE + +LSKHGGS NA T E T ++FE++ + L+GAL RF+ FFI PL EA
Sbjct: 79 EKYPDEGGFSEFLSKHGGSHNASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEA 138
Query: 192 MEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQE 251
++RE AV+SEF L +D R+ Q+Q T+ GH +KF GN ++L + + G+ +Q+
Sbjct: 139 LDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETL--SDKPGLVVQQ 196
Query: 252 QIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANV----RKGPQIK-PQFTVEGTI 306
++ + + +Y MKLV+ G +PLD L +LF ++ RK P I P T E T
Sbjct: 197 ELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTG 256
Query: 307 WKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGW 366
K+ + K L + + + ++ K ++YL+HL+G+E GSL ++LK +G
Sbjct: 257 ----KIIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGL 312
Query: 367 ATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIF 426
T +SAG+ S +F +S LTD GL +I +QY+ LLR+ K+ F
Sbjct: 313 ITELSAGLD----PISGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTF 368
Query: 427 KELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFF 486
ELQ++ +++FR+ + DY + LA N+ P EH +Y + +D + I+ L
Sbjct: 369 DELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERLALM 428
Query: 487 MPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNE 546
PEN R+ ++SK + ++G Y +D + ++ W+ + + L LP N
Sbjct: 429 TPENARLWLISKLEEHDKA---AYFYGFPYQVDDYTAQPLDAWQQKADS-IELSLPEPNP 484
Query: 547 FIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFK-LPRANTYFRINLKGGY 605
FIP D S+ ++ T P + ++P +R WY ++ F P+A+ I
Sbjct: 485 FIPDDVSLIKSE-----KKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHAS 539
Query: 606 DNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSK 665
+ +N +LTEL+ +L D L+++ YQAS+A L S++ S+ L+L + GF +LP LL
Sbjct: 540 RSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRA 599
Query: 666 ILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSIL 724
L S +DRF+ K + LKN KP + +L ++ +E+ + L
Sbjct: 600 FLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPYWSREERRNAL 659
Query: 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECV 784
+S+ + AF L + +++E L GNL++ +A ++ +
Sbjct: 660 ESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADA-------TNLAETLQKKLPAIGSTWY 712
Query: 785 IC----LPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEP 840
L G + N+ I Q ++ K L+ L +++
Sbjct: 713 RNPSVYLLKGGTRIFETVGGESDSANAAILYPQQYDEIKSSALSS------LLGQLIHPW 766
Query: 841 FFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGL 900
FF+QLRTKEQLGY V PR R G F +QS+ +P YL ERI+ F+ + L +
Sbjct: 767 FFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELREM 826
Query: 901 DDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVI 960
+E FE + L+ ++L+ +L E++R W FD +K+ E +K++ K ++
Sbjct: 827 SEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLL 886
Query: 961 SWYKTYL 967
+++ L
Sbjct: 887 DFFENAL 893
|
Length = 937 |
| >gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) | Back alignment and domain information |
|---|
| >gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain | Back alignment and domain information |
|---|
| >gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain | Back alignment and domain information |
|---|
| >gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin | Back alignment and domain information |
|---|
| >gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1018 | |||
| KOG0959 | 974 | consensus N-arginine dibasic convertase NRD1 and r | 100.0 | |
| COG1025 | 937 | Ptr Secreted/periplasmic Zn-dependent peptidases, | 100.0 | |
| PRK15101 | 961 | protease3; Provisional | 100.0 | |
| PTZ00432 | 1119 | falcilysin; Provisional | 100.0 | |
| TIGR02110 | 696 | PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe | 100.0 | |
| COG1026 | 978 | Predicted Zn-dependent peptidases, insulinase-like | 100.0 | |
| KOG2019 | 998 | consensus Metalloendoprotease HMP1 (insulinase sup | 100.0 | |
| COG0612 | 438 | PqqL Predicted Zn-dependent peptidases [General fu | 100.0 | |
| KOG0960 | 467 | consensus Mitochondrial processing peptidase, beta | 100.0 | |
| KOG0961 | 1022 | consensus Predicted Zn2+-dependent endopeptidase, | 100.0 | |
| KOG2067 | 472 | consensus Mitochondrial processing peptidase, alph | 100.0 | |
| COG0612 | 438 | PqqL Predicted Zn-dependent peptidases [General fu | 100.0 | |
| PRK15101 | 961 | protease3; Provisional | 99.93 | |
| KOG2583 | 429 | consensus Ubiquinol cytochrome c reductase, subuni | 99.93 | |
| TIGR02110 | 696 | PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe | 99.92 | |
| KOG0960 | 467 | consensus Mitochondrial processing peptidase, beta | 99.91 | |
| KOG2067 | 472 | consensus Mitochondrial processing peptidase, alph | 99.88 | |
| PF00675 | 149 | Peptidase_M16: Insulinase (Peptidase family M16) T | 99.88 | |
| PTZ00432 | 1119 | falcilysin; Provisional | 99.81 | |
| PF05193 | 184 | Peptidase_M16_C: Peptidase M16 inactive domain; In | 99.79 | |
| PF05193 | 184 | Peptidase_M16_C: Peptidase M16 inactive domain; In | 99.65 | |
| COG1026 | 978 | Predicted Zn-dependent peptidases, insulinase-like | 99.39 | |
| COG1025 | 937 | Ptr Secreted/periplasmic Zn-dependent peptidases, | 99.29 | |
| KOG2583 | 429 | consensus Ubiquinol cytochrome c reductase, subuni | 99.17 | |
| KOG2019 | 998 | consensus Metalloendoprotease HMP1 (insulinase sup | 99.09 | |
| KOG0959 | 974 | consensus N-arginine dibasic convertase NRD1 and r | 99.07 | |
| PF00675 | 149 | Peptidase_M16: Insulinase (Peptidase family M16) T | 98.67 | |
| KOG0961 | 1022 | consensus Predicted Zn2+-dependent endopeptidase, | 98.57 | |
| PF03410 | 590 | Peptidase_M44: Protein G1; InterPro: IPR005072 In | 97.83 | |
| PHA03081 | 595 | putative metalloprotease; Provisional | 97.64 | |
| PF08367 | 248 | M16C_assoc: Peptidase M16C associated; InterPro: I | 97.56 | |
| PF08367 | 248 | M16C_assoc: Peptidase M16C associated; InterPro: I | 94.68 |
| >KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-122 Score=1066.40 Aligned_cols=945 Identities=42% Similarity=0.704 Sum_probs=873.6
Q ss_pred CCCCCCccccCCccccCCCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccc
Q 001753 1 MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDE 80 (1018)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1018)
|.|+..+..-+..+.|++.|+|.||+++|+|||+|+|++||.+ +
T Consensus 5 ~~~~~~~~~~~~~~~k~~~d~r~yr~~~L~Ngl~alLisDp~t--------------D---------------------- 48 (974)
T KOG0959|consen 5 MSGNIVLKREDVSIVKSLGDTREYRGIELTNGLRALLISDPKT--------------D---------------------- 48 (974)
T ss_pred cccchhhhhcccccccCCCCccceeEEEecCCceEEEecCCCC--------------C----------------------
Confidence 5677788888888999999999999999999999999999988 7
Q ss_pred cchhhhhccccccccccceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCce
Q 001753 81 NDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHT 160 (1018)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t 160 (1018)
.+++++.|++||+.||.+.+|||||+|||+|+||++||.++++..+|.++||+.||+|+.++|
T Consensus 49 -----------------~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~e~T 111 (974)
T KOG0959|consen 49 -----------------KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDSEHT 111 (974)
T ss_pred -----------------ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeChhhHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccc
Q 001753 161 CYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLI 240 (1018)
Q Consensus 161 ~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~ 240 (1018)
+|+|.+..++|+.+|++|+++|.+|+|+++.++||+.+|.+|++++.+++.||.+++.+.++.++|||++|.+||.++|.
T Consensus 112 ~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~ 191 (974)
T KOG0959|consen 112 NYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLL 191 (974)
T ss_pred eEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred h-hhhcCccHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccc---cceEEEEE
Q 001753 241 G-AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLE 316 (1018)
Q Consensus 241 ~-~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~---~~~~~~~~ 316 (1018)
. |.++ -+++.|++||++||++++|++||+|+.+++.++.++.+.|+.+++...+.|.+. .+|+. .++.+.+.
T Consensus 192 ~~p~~~--~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~--~~p~~~e~~~~~~~v~ 267 (974)
T KOG0959|consen 192 EGPREI--DLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFP--EPPFLPEELKKLVRVV 267 (974)
T ss_pred hccccc--hHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCccc--CCCCChHHhCcEEEEE
Confidence 5 3222 569999999999999999999999999999999999999999999888777763 33433 56788889
Q ss_pred ecccccEEEEEEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeCh
Q 001753 317 AVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTD 396 (1018)
Q Consensus 317 ~~~~~~~l~i~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~ 396 (1018)
|.++...+.|.|+.|+....|+..+.+++++++|++++|+|+..|+.+||+.++.++......+++ .|.|.+.+++
T Consensus 268 pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~----~f~v~idLtd 343 (974)
T KOG0959|consen 268 PIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYS----FFNVSIDLTD 343 (974)
T ss_pred eccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccc----eEEEEEEecc
Confidence 999999999999999998889999999999999999999999999999999999998886554444 9999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccccccccccCCCH
Q 001753 397 SGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDE 476 (1018)
Q Consensus 397 ~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~ 476 (1018)
.|.+++++++..++++|+.|+..|..+|.+++...+....|+++.+.++.+++..++.+|+.+|.++++.+..++..+++
T Consensus 344 ~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p 423 (974)
T KOG0959|consen 344 EGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDP 423 (974)
T ss_pred ccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcCceEEEEEeCCCCCCCCccccceecceeeeecCChhHHHhhcCCCCCCCcccCCCCCCCCCCCceeec
Q 001753 477 EMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRA 556 (1018)
Q Consensus 477 ~~i~~~~~~l~~~~~~i~~~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~ 556 (1018)
+.|+.++..|.|.|+++++++..+ +.+++..|+|||+.|.++++|.++++.|....+ .+.+.+|.+|.|||++|++..
T Consensus 424 ~~i~~~~~~L~p~n~~v~~~s~~~-~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~-~~~l~lP~~nefI~t~f~~~~ 501 (974)
T KOG0959|consen 424 DLIQEVLSSLVPSNMRVILVSRSF-EGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHL-NPELHLPTPNEFIPTDFSILP 501 (974)
T ss_pred HHHHHHHHhcCcccceeeeeeecc-ccccccccceeccccccccCCHHHHHHhhccCc-cccccCCCCCccccccccccc
Confidence 999999999999999999999888 577999999999999999999999999966554 678999999999999999887
Q ss_pred cCCCCCCCCCCCCeEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 001753 557 NDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAK 636 (1018)
Q Consensus 557 ~~~~~~~~~~~~P~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g 636 (1018)
.+.. ....|.++.+++..++||++|+.|+.||+.+.++|.+|....++.+.+++.++..++.+.+.++.|.|..+|
T Consensus 502 ~~~~----~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aG 577 (974)
T KOG0959|consen 502 APIP----KLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAG 577 (974)
T ss_pred ccCc----cccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 6542 234899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh-cccChhhHHHHHHHHhhcCCCC
Q 001753 637 LETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKN-TNMKPLSHSSYLRLQVLCQSFY 715 (1018)
Q Consensus 637 ~~~~~~~~~~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~-~~~~p~~~a~~~~~~~l~~~~~ 715 (1018)
++++++.+..|+.++++||+++++.+++.+.+++.+..+++++|+.+|+.+.+++++ ..++|+.+|.+.+..++.+..|
T Consensus 578 l~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W 657 (974)
T KOG0959|consen 578 LTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIW 657 (974)
T ss_pred ceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999999999999 5556999999999999999999
Q ss_pred CHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCC-----CCCccccccceeEEcCCC
Q 001753 716 DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ-----PLPIEMRHQECVICLPSG 790 (1018)
Q Consensus 716 ~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 790 (1018)
+..+.++.++.++++++..|...++++..++++|+||++.++|+++++.+.+.++.. |.........+.+.++.|
T Consensus 658 ~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G 737 (974)
T KOG0959|consen 658 SKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNG 737 (974)
T ss_pred chHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceeccCC
Confidence 999999999999999999999999999999999999999999999998888888322 111123445667788999
Q ss_pred CeEEEEeccCCCCCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEE
Q 001753 791 ANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCF 870 (1018)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~ 870 (1018)
..++++.. .++.+.|+++..++|+ +..+..+.+.+.|+.+++..++|+.||||+||||.|+++.....|..++.+
T Consensus 738 ~~~~~~~~-~n~~~~ns~i~~~~Q~----~~~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i 812 (974)
T KOG0959|consen 738 DYYFYRHL-LNKTDDNSCIEVYYQI----GVQDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQI 812 (974)
T ss_pred ceEEEEcc-cccCCCCceEEEEEEc----ccchhHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeecCcceeEE
Confidence 88876654 6788999999999998 788899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHH
Q 001753 871 CIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAED 950 (1018)
Q Consensus 871 ~vqs~~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~ 950 (1018)
.||+. ++++.++.+|+.|++.+.+.+..|++++|+..+.+++.....++.++.....++|.+|..+.|.|+..++.++.
T Consensus 813 ~Vqs~-~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~ 891 (974)
T KOG0959|consen 813 TVQSE-KSVDYLEERIESFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEA 891 (974)
T ss_pred EEccC-CCchHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcch-hhhcc------CCcceecChHHHhhcCcccccCC
Q 001753 951 LKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKE-SEKHS------KSALVIKDLTAFKLSSEFYQSLC 1018 (1018)
Q Consensus 951 i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1018)
++.+|++|+..++..++..++..+++++|.+.|+....+. .++.. ....-|.+++.||+.+++||..+
T Consensus 892 l~~i~k~~~i~~f~~~~~~~a~~~~~lsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~d~~~fk~~~~l~~~~~ 966 (974)
T KOG0959|consen 892 LKKITKEDVINFFDEYIRKGAAKRKKLSVHVHGKQLDEEASSEKIKSQSENLLKIKEITDIVAFKRSLPLYPLVK 966 (974)
T ss_pred HHhhhHHHHHHHHHhhccccchhcceEEEEecCchhhhhhhcccchhhhhhcccccchHHHHHhhcccccccccc
Confidence 9999999999999999999999999999999998753331 11110 11223779999999999999754
|
|
| >COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15101 protease3; Provisional | Back alignment and domain information |
|---|
| >PTZ00432 falcilysin; Provisional | Back alignment and domain information |
|---|
| >TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15101 protease3; Provisional | Back alignment and domain information |
|---|
| >KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification | Back alignment and domain information |
|---|
| >PTZ00432 falcilysin; Provisional | Back alignment and domain information |
|---|
| >PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification | Back alignment and domain information |
|---|
| >KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PHA03081 putative metalloprotease; Provisional | Back alignment and domain information |
|---|
| >PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1018 | ||||
| 3cww_A | 990 | Crystal Structure Of Ide-Bradykinin Complex Length | 1e-163 | ||
| 3qz2_A | 990 | The Structure Of Cysteine-Free Human Insulin Degrad | 1e-162 | ||
| 2wby_A | 990 | Crystal Structure Of Human Insulin-Degrading Enzyme | 1e-162 | ||
| 3e4a_A | 1019 | Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut | 1e-162 | ||
| 3e4z_A | 990 | Crystal Structure Of Human Insulin Degrading Enzyme | 1e-161 | ||
| 3hgz_A | 969 | Crystal Structure Of Human Insulin-Degrading Enzyme | 1e-160 | ||
| 3p7l_A | 978 | Rat Insulin Degrading Enzyme (Insulysin) Length = 9 | 1e-158 | ||
| 3tuv_A | 1019 | Crystal Structure Of Insulysin With Bound Atp Lengt | 1e-158 | ||
| 3p7o_A | 1019 | Rat Insulin Degrading Enzyme (Insulysin) E111f Muta | 1e-157 | ||
| 2g47_A | 990 | Crystal Structure Of Human Insulin-Degrading Enzyme | 1e-157 | ||
| 2jg4_A | 990 | Substrate-Free Ide Structure In Its Closed Conforma | 1e-156 | ||
| 1q2l_A | 939 | Crystal Structure Of Pitrilysin Length = 939 | 1e-77 | ||
| 3hdi_A | 421 | Crystal Structure Of Bacillus Halodurans Metallo Pe | 5e-11 | ||
| 3eoq_A | 406 | The Crystal Structure Of Putative Zinc Protease Bet | 4e-08 | ||
| 1hr6_B | 443 | Yeast Mitochondrial Processing Peptidase Length = 4 | 1e-07 | ||
| 1hr7_B | 443 | Yeast Mitochondrial Processing Peptidase Beta-E73q | 2e-07 | ||
| 3amj_C | 437 | The Crystal Structure Of The Heterodimer Of M16b Pe | 2e-06 | ||
| 3ami_A | 445 | The Crystal Structure Of The M16b Metallopeptidase | 2e-06 |
| >pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 | Back alignment and structure |
|
| >pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 | Back alignment and structure |
| >pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 | Back alignment and structure |
| >pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 | Back alignment and structure |
| >pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 | Back alignment and structure |
| >pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 | Back alignment and structure |
| >pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 | Back alignment and structure |
| >pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 | Back alignment and structure |
| >pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 | Back alignment and structure |
| >pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 | Back alignment and structure |
| >pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 | Back alignment and structure |
| >pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 | Back alignment and structure |
| >pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase Length = 421 | Back alignment and structure |
| >pdb|3EOQ|A Chain A, The Crystal Structure Of Putative Zinc Protease Beta- Subunit From Thermus Thermophilus Hb8 Length = 406 | Back alignment and structure |
| >pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443 | Back alignment and structure |
| >pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant Length = 443 | Back alignment and structure |
| >pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 437 | Back alignment and structure |
| >pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase Subunit From Sphingomonas Sp. A1 Length = 445 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1018 | |||
| 3cww_A | 990 | Insulysin, insulin-degrading enzyme, insulinase; A | 0.0 | |
| 1q2l_A | 939 | Protease III; hydrolase; 2.20A {Escherichia coli s | 0.0 | |
| 3ami_A | 445 | Zinc peptidase; alpha/beta, zinc binding, hydrolas | 2e-21 | |
| 3go9_A | 492 | Insulinase family protease; IDP00573, structural g | 2e-20 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 3amj_B | 424 | Zinc peptidase inactive subunit; alpha/beta, zinc | 1e-14 | |
| 1hr6_A | 475 | Alpha-MPP, mitochondrial processing peptidase alph | 7e-14 | |
| 2fge_A | 995 | Atprep2;, zinc metalloprotease (insulinase family) | 9e-14 | |
| 3eoq_A | 406 | Putative zinc protease; two similar domains of bet | 5e-13 | |
| 3hdi_A | 421 | Processing protease; CAGE structure, M16B peptidas | 1e-12 | |
| 3cx5_A | 431 | Cytochrome B-C1 complex subunit 1, mitochondrial; | 5e-12 | |
| 3gwb_A | 434 | Peptidase M16 inactive domain family protein; pept | 7e-12 | |
| 1hr6_B | 443 | Beta-MPP, mitochondrial processing peptidase beta | 1e-11 | |
| 1pp9_B | 439 | Ubiquinol-cytochrome C reductase complex core Pro | 2e-11 | |
| 1pp9_A | 446 | Ubiquinol-cytochrome C reductase complex core Pro | 6e-11 | |
| 3s5m_A | 1193 | Falcilysin; M16 metalloprotease, peptidase, hydrol | 4e-10 | |
| 3cx5_B | 352 | Cytochrome B-C1 complex subunit 2, mitochondrial; | 1e-08 | |
| 3d3y_A | 425 | Uncharacterized protein; APC29635, conserved prote | 5e-08 |
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 | Back alignment and structure |
|---|
Score = 776 bits (2004), Expect = 0.0
Identities = 344/1029 (33%), Positives = 539/1029 (52%), Gaps = 91/1029 (8%)
Query: 7 VWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDE 66
+ + KSP DKR YR +EL N + LL+ DP
Sbjct: 18 IKRIGNHITKSPEDKREYRGLELANGIKVLLISDP------------------------- 52
Query: 67 YEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHM 126
T K++AA+ V +GS DP GL+HFL+HM
Sbjct: 53 ----------------------------TTDKSSAALDVHIGSLSDPPNIAGLSHFLQHM 84
Query: 127 LFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFISPL 186
LF+G+ ++P ENEY +LS+H GSSNA+T EHT Y+F++ E L+GAL RF+QFF+SPL
Sbjct: 85 LFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLSPL 144
Query: 187 MKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG-AMEK 245
A +REV AVDSE + + NDA RL QL+ T H F+KF GNK +L ++
Sbjct: 145 FDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQE 204
Query: 246 GINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGT 305
GI+++++++K + YY LM +VV+G E LD L + VV+LF+ V P+F
Sbjct: 205 GIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPF 264
Query: 306 IWKAC-KLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGR 364
+ +L+++ +KD+ L +T+ +P L + Y YL HL+GHEG GSL S LK +
Sbjct: 265 QEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSK 324
Query: 365 GWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKW 424
GW ++ G F++++ LT+ GL + DII ++QYI+ LR PQ+W
Sbjct: 325 GWVNTLVGGQKAGARGFM----FFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEW 380
Query: 425 IFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLG 484
+F+EL+D+ + FRF +++ Y +++AG L YP E V+ EY+ E + ++I+ +L
Sbjct: 381 VFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLD 440
Query: 485 FFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQ 544
PEN+R+ +VSKSF D E W+G++Y +E I +++ W+N +LP++
Sbjct: 441 KLRPENVRVAIVSKSFEGKTD-RTEEWYGTQYKQEAIPDAVIAKWQNAALNG-KFKLPTK 498
Query: 545 NEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGG 604
NEFIPT+F I + + I D + + W+K D+ F LP+AN F
Sbjct: 499 NEFIPTNFEILPLEAAATPYPA----LIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFA 554
Query: 605 YDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLS 664
Y + + + L++ LLKD LNE Y A +A L + + L V G+NDK P+LL
Sbjct: 555 YVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLK 614
Query: 665 KILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSI 723
KI+ +F + RF++IKE +R+L N +P H+ Y ++ + + DE
Sbjct: 615 KIIEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEA 674
Query: 724 LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIF----SVQPLPIEMR 779
L ++L L AFIP+L S+L+IE L HGN++++ A+ I + + +PL
Sbjct: 675 LADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQL 734
Query: 780 HQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEE 839
+ LP V +N+ NS IE+Y+Q M+ T ++LF +I+ E
Sbjct: 735 AAYREVQLPDRGWFV--YQQRNEVHNNSGIEIYYQT----DMQSTSENMFLELFAQIISE 788
Query: 840 PFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEG 899
P FN LRTKEQLGY+V PR + G F IQS K P YL+ R++ F+ +++ +E
Sbjct: 789 PAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEK-PPHYLESRVEAFLITMEKSIED 847
Query: 900 LDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDV 959
+ +E+F+ + L + L+K L+ ES ++W +I ++Y FD+ E LK++ K D+
Sbjct: 848 MTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTKADI 907
Query: 960 ISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEK--------------HSKSALVIKDLT 1005
I +YK L +P+ +++V V + VI+++T
Sbjct: 908 IKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQNMT 967
Query: 1006 AFKLSSEFY 1014
AFK +
Sbjct: 968 AFKRGLPLF 976
|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1018 | ||||
| d1q2la3 | 240 | d.185.1.1 (A:264-503) Protease III {Escherichia co | 2e-61 | |
| d1q2la2 | 228 | d.185.1.1 (A:733-960) Protease III {Escherichia co | 3e-43 | |
| d1q2la1 | 229 | d.185.1.1 (A:504-732) Protease III {Escherichia co | 1e-24 | |
| d1q2la1 | 229 | d.185.1.1 (A:504-732) Protease III {Escherichia co | 2e-09 | |
| d1q2la4 | 240 | d.185.1.1 (A:24-263) Protease III {Escherichia col | 2e-24 | |
| d2fgea4 | 257 | d.185.1.1 (A:15-271) Presequence protease 1, PREP1 | 2e-21 | |
| d3cx5b1 | 202 | d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 | 5e-18 | |
| d1ppja1 | 232 | d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 | 8e-17 | |
| d3cx5a1 | 213 | d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 | 2e-15 | |
| d1hr6b1 | 222 | d.185.1.1 (B:24-245) Mitochondrial processing pept | 5e-15 | |
| d1ppjb1 | 219 | d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 | 1e-11 | |
| d1hr6a1 | 220 | d.185.1.1 (A:14-233) Mitochondrial processing pept | 3e-09 |
| >d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: LuxS/MPP-like metallohydrolase superfamily: LuxS/MPP-like metallohydrolase family: MPP-like domain: Protease III species: Escherichia coli [TaxId: 562]
Score = 207 bits (527), Expect = 2e-61
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 7/232 (3%)
Query: 311 KLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSI 370
+ +L + + + ++ K+++ + +L+G+ G+L +L+ +G I
Sbjct: 14 IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGI 73
Query: 371 SAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQ 430
SA S + +S LTD GL ++ ++ Y+ LLR+ K F EL
Sbjct: 74 SANSDPIVNGNSGV---LAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELA 130
Query: 431 DIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPEN 490
++ +++FR+ DY LA ++ P EH + + + +D + +K L P+N
Sbjct: 131 NVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQN 190
Query: 491 MRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLP 542
RI +S ++ + + Y + IS W+ D++L LP
Sbjct: 191 ARIWYISPKEPHNKT---AYFVDAPYQVDKISAQTFADWQK-KAADIALSLP 238
|
| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Length = 228 | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1018 | |||
| d1q2la4 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1hr6a1 | 220 | Mitochondrial processing peptidase (MPP) alpha cha | 100.0 | |
| d1ppja1 | 232 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 100.0 | |
| d1hr6b1 | 222 | Mitochondrial processing peptidase (MPP) beta chai | 100.0 | |
| d1ppjb1 | 219 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 100.0 | |
| d3cx5a1 | 213 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 100.0 | |
| d2fgea4 | 257 | Presequence protease 1, PREP1 {Thale cress (Arabid | 100.0 | |
| d1q2la2 | 228 | Protease III {Escherichia coli [TaxId: 562]} | 100.0 | |
| d3cx5b1 | 202 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 100.0 | |
| d1q2la1 | 229 | Protease III {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1q2la3 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1q2la1 | 229 | Protease III {Escherichia coli [TaxId: 562]} | 99.91 | |
| d1ppjb2 | 204 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.87 | |
| d1hr6b2 | 217 | Mitochondrial processing peptidase (MPP) beta chai | 99.87 | |
| d1hr6b1 | 222 | Mitochondrial processing peptidase (MPP) beta chai | 99.86 | |
| d1ppja1 | 232 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.85 | |
| d1hr6a1 | 220 | Mitochondrial processing peptidase (MPP) alpha cha | 99.85 | |
| d3cx5a1 | 213 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.85 | |
| d1ppja2 | 209 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.84 | |
| d1hr6b2 | 217 | Mitochondrial processing peptidase (MPP) beta chai | 99.84 | |
| d1hr6a2 | 237 | Mitochondrial processing peptidase (MPP) alpha cha | 99.83 | |
| d1ppjb2 | 204 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.83 | |
| d1q2la4 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 99.83 | |
| d1ppjb1 | 219 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.82 | |
| d2fgea2 | 196 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.79 | |
| d1ppja2 | 209 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.77 | |
| d3cx5a2 | 218 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.75 | |
| d1hr6a2 | 237 | Mitochondrial processing peptidase (MPP) alpha cha | 99.74 | |
| d3cx5a2 | 218 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.68 | |
| d3cx5b1 | 202 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 99.66 | |
| d2fgea4 | 257 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.55 | |
| d2fgea2 | 196 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.48 | |
| d2fgea1 | 258 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.29 | |
| d2fgea3 | 268 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.01 | |
| d1q2la2 | 228 | Protease III {Escherichia coli [TaxId: 562]} | 98.83 | |
| d2fgea1 | 258 | Presequence protease 1, PREP1 {Thale cress (Arabid | 98.75 | |
| d2fgea3 | 268 | Presequence protease 1, PREP1 {Thale cress (Arabid | 97.62 | |
| d1q2la3 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 94.83 | |
| d3cx5b2 | 150 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 94.27 | |
| d3cx5b2 | 150 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 94.24 |
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: LuxS/MPP-like metallohydrolase superfamily: LuxS/MPP-like metallohydrolase family: MPP-like domain: Protease III species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=302.87 Aligned_cols=234 Identities=35% Similarity=0.548 Sum_probs=219.7
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 68863369786466217893689889999679999777754335897655434467556653355433444401121014
Q 001753 10 SDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKG 89 (1018)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1018)
..+++.|+..|.+.|+.++|+|||+|++++++.. +
T Consensus 7 ~~~~~~k~~~d~~~~~~~~L~NGl~V~~~~~~~~--------------~------------------------------- 41 (240)
T d1q2la4 7 IQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQA--------------V------------------------------- 41 (240)
T ss_dssp CCSCCCCCTTCCCEEEEEEETTSCEEEEEECTTC--------------S-------------------------------
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC--------------C-------------------------------
T ss_conf 3014779988874428999289999999997999--------------8-------------------------------
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHH
Q ss_conf 56555345027999917778889999998249998761058767999007999999539962034289824899982910
Q 001753 90 KGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKRE 169 (1018)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~ 169 (1018)
.+.+++++++|+.+||++..|+||+++||+++|+.+++....+.+.++..|+.+||+|+.++|.|+++++++
T Consensus 42 --------~v~~~l~~~~Gs~~e~~~~~Gla~ll~~ll~~gt~~~~~~~~~~~~~~~~g~~~na~~~~~~t~~~~~~~~~ 113 (240)
T d1q2la4 42 --------KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVEND 113 (240)
T ss_dssp --------SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEEEEECGG
T ss_pred --------EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCCCC
T ss_conf --------799999996774210234578899999844215675203579999999729702012222211442034553
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCH
Q ss_conf 09999999995110789992679999989999998611993999999998407999999866657433010042059228
Q 001753 170 FLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINL 249 (1018)
Q Consensus 170 ~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~ 249 (1018)
+++.+|+++++++.+|.|++++|++++..+.+|++...++|...+.+.+..++|++||++++..|+.+++.+.. ...+
T Consensus 114 ~l~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~~~--~~~~ 191 (240)
T d1q2la4 114 ALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKP--GNPV 191 (240)
T ss_dssp GHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCCHHHHSCBT--TBCH
T ss_pred CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH--HHHH
T ss_conf 22220145567750975104443246666665565400016888988999983246765445888700577765--3566
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9999999982178887199998499888999999976243458988898
Q 001753 250 QEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKP 298 (1018)
Q Consensus 250 ~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~ 298 (1018)
.+++++||++||+|+||+|+|+|++++++++++++++||.||++..+.|
T Consensus 192 ~~~l~~f~~~~y~p~n~~l~i~G~~~~~~l~~~i~~~fg~lp~~~~~~P 240 (240)
T d1q2la4 192 QQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKP 240 (240)
T ss_dssp HHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCCC
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999999997078475799998289999999999998608998999978
|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|