Citrus Sinensis ID: 001781
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1013 | ||||||
| 356533887 | 1044 | PREDICTED: uncharacterized protein LOC10 | 0.862 | 0.837 | 0.624 | 0.0 | |
| 356574667 | 1045 | PREDICTED: uncharacterized protein LOC10 | 0.867 | 0.841 | 0.617 | 0.0 | |
| 224113167 | 1073 | predicted protein [Populus trichocarpa] | 0.856 | 0.808 | 0.584 | 0.0 | |
| 18414574 | 1050 | UDP-glycosyltransferase family protein [ | 0.880 | 0.849 | 0.586 | 0.0 | |
| 297810537 | 1051 | hypothetical protein ARALYDRAFT_487229 [ | 0.861 | 0.830 | 0.589 | 0.0 | |
| 449441828 | 1034 | PREDICTED: uncharacterized protein LOC10 | 0.872 | 0.854 | 0.591 | 0.0 | |
| 449522726 | 1037 | PREDICTED: uncharacterized protein LOC10 | 0.872 | 0.852 | 0.591 | 0.0 | |
| 225448875 | 1028 | PREDICTED: uncharacterized protein LOC10 | 0.826 | 0.814 | 0.624 | 0.0 | |
| 147820655 | 1037 | hypothetical protein VITISV_036074 [Viti | 0.826 | 0.807 | 0.618 | 0.0 | |
| 334187426 | 1035 | UDP-glycosyltransferase family protein [ | 0.865 | 0.847 | 0.572 | 0.0 |
| >gi|356533887|ref|XP_003535489.1| PREDICTED: uncharacterized protein LOC100779157 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/905 (62%), Positives = 682/905 (75%), Gaps = 31/905 (3%)
Query: 87 RDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNSTPSAANAATSGPRFNRKGFSS-LFP 145
R F FKRNP+H + + S R L N+ ++ N RKG LFP
Sbjct: 28 RGGFPFKRNPSHHRHRG----SFDRQL---PRSNNNSNSNNNINRSHLHKRKGLLLWLFP 80
Query: 146 F-RGAYLLYFMIFLAVFAFAMASMVLQNSIASVFG--AERGRPIREELRFGSRLKFVPDQ 202
F + Y I VF FA+AS+V+Q+SI SVF AER IR +RFGS L+FVP +
Sbjct: 81 FPKSKSGFYAFIIAVVFLFALASLVMQSSITSVFRQRAERASYIRGGIRFGSALRFVPGK 140
Query: 203 VG----FGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIY 258
+ G+GLD +RS PR GVR PRI LILG+M D +SL+L+TV++NLQKLGYVFKI+
Sbjct: 141 ISQRFLSGDGLDPVRSQPRIGVRAPRIALILGHMTIDPQSLMLVTVIRNLQKLGYVFKIF 200
Query: 259 AVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP 318
AV G + S+WE I G IS L + LIDWSIF+GII DSLEAK AISS+MQ+PF S+P
Sbjct: 201 AVGHGKARSIWENIGGGISPLSAKHQGLIDWSIFEGIIVDSLEAKVAISSVMQDPFCSVP 260
Query: 319 LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFV 378
L+WIIQEDSL++RLPVY + G+++++S+W+S FSR V+VFPD+T PMLYS LD GNFFV
Sbjct: 261 LIWIIQEDSLSSRLPVYEQMGWEHIVSHWRSAFSRAGVVVFPDFTYPMLYSELDTGNFFV 320
Query: 379 IPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438
IPGSP DVWA E+YSK+H K QLR+ +GF K++++V+VVGSS FY+ LSWDYAVAMH VG
Sbjct: 321 IPGSPVDVWAAESYSKTHAKDQLRELSGFGKNDMLVLVVGSSVFYDNLSWDYAVAMHSVG 380
Query: 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL 498
PLL KYARRN SFKFVFLCGNSTDGY+DALQ VASR+GL + S+RHYG NGDVN VL
Sbjct: 381 PLLTKYARRNGATDSFKFVFLCGNSTDGYDDALQGVASRMGLRQGSIRHYGLNGDVNSVL 440
Query: 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGL 558
LMADI+LYGS+Q QGFP L++RAMTF IPV+ PDF ++K+Y+ +G IFF K NPE L
Sbjct: 441 LMADIILYGSAQEVQGFPPLLIRAMTFEIPVVVPDFSVLKKYIVDGVHGIFFSKHNPEAL 500
Query: 559 SRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPI 618
AFSL +SNG+LSKFA+ +AS+GR AKN+LALDC+T YAR+LENVLNFPSDALLPGP+
Sbjct: 501 MNAFSLLLSNGRLSKFAQAIASSGRQLAKNVLALDCITGYARLLENVLNFPSDALLPGPV 560
Query: 619 SQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEE-----FTKNITE 673
SQ+QQ SWEWNLFR EIDL D S+R S+V +E E ++ +I E
Sbjct: 561 SQIQQGSWEWNLFRNEIDLSKID--------GDFSNRKVSIVYAVEHELASLNYSTSIFE 612
Query: 674 NENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSERF 733
N +D +++LDWD+L +IE SEE E E+E+ EER + WDDIYRNARKSE+
Sbjct: 613 NGTEVPLRDELTQLDWDILREIEISEENEMFEVEEAEERREKGVGVWDDIYRNARKSEKL 672
Query: 734 KFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDAV 793
KFE NERDEGELERTGQPVCIYEIY+G+G WPFLHHGSLYRGL+LS A+R SDDVDAV
Sbjct: 673 KFEVNERDEGELERTGQPVCIYEIYNGAGVWPFLHHGSLYRGLSLSRRAQRQSSDDVDAV 732
Query: 794 SRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVLE 853
RL LLN T+YRDILCE+GGMF+IAN+VDNIH+RPWIGFQSWRAAGRKV+LS AEKVLE
Sbjct: 733 GRLPLLNDTYYRDILCEMGGMFAIANRVDNIHRRPWIGFQSWRAAGRKVALSAKAEKVLE 792
Query: 854 ETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYGL 912
ET+QE GDV+YFW DMD N+N +FW MCDILNGG+CR F++ FRQMY L
Sbjct: 793 ETMQENFRGDVIYFWGRFDMDQSVIGNHN-ANSFWYMCDILNGGNCRIVFQEGFRQMYAL 851
Query: 913 PSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCLLS 972
P H EALPPMPED G WSALH WVM TPSFLEFIMFSRMFVDS+DAL+ +S+K + CLL
Sbjct: 852 PPHAEALPPMPED-GYWSALHSWVMPTPSFLEFIMFSRMFVDSIDALHRDSTKYSLCLLG 910
Query: 973 SSELE 977
SSE+E
Sbjct: 911 SSEIE 915
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574667|ref|XP_003555467.1| PREDICTED: uncharacterized protein LOC100790929 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/907 (61%), Positives = 681/907 (75%), Gaps = 28/907 (3%)
Query: 85 SIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNSTPSAANAATSGPRFNRKGFSS-L 143
+IR F FKRNP H + + L R +S + + + RKG L
Sbjct: 24 AIRGGFPFKRNPGHHRHRASFDRQLPRSNNSSSSSSSNNNNISIRSH--LHKRKGLLLWL 81
Query: 144 FPF-RGAYLLYFMIFLAVFAFAMASMVLQNSIASVF--GAERGRPIREELRFGSRLKFVP 200
FPF + Y I + VF FA+ASMVLQ+SI SVF A+ R I +RFGS L+FVP
Sbjct: 82 FPFPKSKSGFYAFIIVVVFLFALASMVLQSSITSVFRQSADSARYISGGIRFGSALRFVP 141
Query: 201 DQVG----FGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFK 256
++ G+GLD +RS PR GVR PRI LILG+M D +SL+L+TV+ NLQKLGYVFK
Sbjct: 142 GRISQRFLSGDGLDPVRSQPRIGVRAPRIALILGHMTIDPQSLMLVTVIWNLQKLGYVFK 201
Query: 257 IYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHS 316
I+AV G + S+WE I G+I L E LIDWSIF+GII DSLEAK AISS+MQEPF S
Sbjct: 202 IFAVGHGKARSIWENIGGRICPLSTEHQGLIDWSIFEGIIVDSLEAKVAISSVMQEPFCS 261
Query: 317 IPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNF 376
+PL+WIIQEDSL++RLPVY + G+++++S+W+S FSR +V+VFPD+T PMLYS LD GNF
Sbjct: 262 VPLIWIIQEDSLSSRLPVYEQMGWEHIVSHWRSAFSRASVVVFPDFTYPMLYSELDTGNF 321
Query: 377 FVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436
FVIPGSP DVWA E+Y K+H K QLR+ +GF K++++V+VVGSS F+++LSWDYAVAMH
Sbjct: 322 FVIPGSPVDVWAAESYHKTHAKEQLRELSGFGKNDMLVLVVGSSVFFDDLSWDYAVAMHS 381
Query: 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNG 496
VGPLL +YARRN SFKFVFLCGNSTDGY+DALQ VASR+GL + S+RHYG NGDVN
Sbjct: 382 VGPLLTRYARRNDATDSFKFVFLCGNSTDGYDDALQGVASRMGLRQGSIRHYGLNGDVNS 441
Query: 497 VLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556
VLLMADI+LYGS+Q QGFP L++RAMTF IPV+ PDF ++K+Y+ +G IFF K NPE
Sbjct: 442 VLLMADIILYGSAQEVQGFPPLLIRAMTFEIPVVVPDFSVLKKYIVDGVHGIFFSKHNPE 501
Query: 557 GLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPG 616
L AFSL +SNG+LSKFA+ +AS+GR AKN+LALDC+T YAR+LENVLNFPSDALLPG
Sbjct: 502 ALMNAFSLLLSNGRLSKFAQAIASSGRQLAKNVLALDCITGYARLLENVLNFPSDALLPG 561
Query: 617 PISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEE-----FTKNI 671
+SQ+QQ SWEWNLF+ EIDL D S+R S+V +E E ++ +I
Sbjct: 562 AVSQIQQGSWEWNLFQNEIDLSKID-----------SNRKVSIVYAVEHELASLNYSTSI 610
Query: 672 TENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSE 731
EN QD +++LD D L +IE SEE E E+E+ EERM+ + WDDIYRNARKSE
Sbjct: 611 VENGTEVPLQDELTQLDLDTLREIEISEENEMFEVEEAEERMEKGVSVWDDIYRNARKSE 670
Query: 732 RFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVD 791
+ KFE NERDEGELERTGQ VCIYEIY+G+G WPFLHHGSLYRGL+LS A+R SDDVD
Sbjct: 671 KLKFEVNERDEGELERTGQSVCIYEIYNGAGVWPFLHHGSLYRGLSLSRRAQRQTSDDVD 730
Query: 792 AVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKV 851
AV RL LLN T+YRDILCE+GGMF+IAN+VD+IH+RPWIGFQSWRAAGRKV+LS AE V
Sbjct: 731 AVGRLPLLNDTYYRDILCEMGGMFAIANRVDSIHRRPWIGFQSWRAAGRKVALSAKAENV 790
Query: 852 LEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMY 910
LEET+QE GDV+YFW LDMD RN+N ++FW MCDILNGG+CR F+D FRQMY
Sbjct: 791 LEETMQENFRGDVIYFWGRLDMDQSAIRNHN-AISFWYMCDILNGGNCRIVFQDGFRQMY 849
Query: 911 GLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCL 970
LP H EALPPMPEDGG WSALH WVM T SFLEFIMFSRMFVDS+DA + +S+K + CL
Sbjct: 850 ALPPHAEALPPMPEDGGYWSALHSWVMPTSSFLEFIMFSRMFVDSIDAKHRDSTKYSLCL 909
Query: 971 LSSSELE 977
L SSE+E
Sbjct: 910 LGSSEIE 916
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224113167|ref|XP_002316413.1| predicted protein [Populus trichocarpa] gi|222865453|gb|EEF02584.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/973 (58%), Positives = 683/973 (70%), Gaps = 105/973 (10%)
Query: 68 AAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNSTPSAAN 127
+ AT T Q+ HSI DRF FKRNPN + + LR H + S
Sbjct: 14 SPATNTGSEGVSDQNFHSISDRFLFKRNPNPSTNSPHKSSKSPPDRLRRWHHYTNKSN-- 71
Query: 128 AATSGPRFNRKG-FSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERG--- 183
NRKG + S PFRG L YF+IFLAVFAF +AS++LQ+SI + +G
Sbjct: 72 --------NRKGGWFSCIPFRGICLFYFVIFLAVFAFVLASILLQSSITGMVVFSKGWID 123
Query: 184 --RPIREELRFGSRLKFVPDQ----VGFGNGLDGLRSTP-RFGVRPPRIGLI-------- 228
R IRE L+ G+ LKFVP + G+GLD R R G+RPPR+ +I
Sbjct: 124 HRRSIREGLKSGTTLKFVPGLRSRLLLEGHGLDHARVLANRVGLRPPRLAVIVKGLGVSL 183
Query: 229 ---------------------------------------LGNMAKDSRSLLLITVVKNLQ 249
LGNM KD +SL+L++V+KNL+
Sbjct: 184 NGHNGNWEIVCWLHPMAMHGPPSMTNMIKLKYGGGGRKILGNMKKDPQSLMLLSVMKNLR 243
Query: 250 KLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSL 309
KLGY KIYA+ +G + ++WE I GQIS+L +QY LIDWSIF+G++ DSLEAKE +SSL
Sbjct: 244 KLGYALKIYALGNGETRTMWEDIGGQISVLRPKQYDLIDWSIFEGVMVDSLEAKEVVSSL 303
Query: 310 MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS 369
QEPF SIPLVWIIQED+LANRLP+Y + Q+L+S+W+S F+R NV+VFPD+ LPMLYS
Sbjct: 304 SQEPFQSIPLVWIIQEDTLANRLPLYQDMNLQHLVSHWRSTFNRANVVVFPDFALPMLYS 363
Query: 370 VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429
VLD GNFFVIPGSP DVW E+YSK+H K+QLR ++GF +D++VV+VVGSSFFY+ELSWD
Sbjct: 364 VLDTGNFFVIPGSPVDVWDAESYSKTHAKHQLRVDHGFSEDDLVVLVVGSSFFYDELSWD 423
Query: 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489
Y VA+H +GP+L +YAR EGSFKFVFLCGNSTD +DA QE+ SR+GL SVRHYG
Sbjct: 424 YTVALHTLGPVLAEYARSKDAEGSFKFVFLCGNSTD--DDAFQEIVSRVGLHPSSVRHYG 481
Query: 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIF 549
NGD N VLL ADIVLYGSSQ EQGFP +++RAMTFGIPVI PD P +K+YV++ A IF
Sbjct: 482 LNGDANSVLLAADIVLYGSSQDEQGFPPVLIRAMTFGIPVIAPDIPTMKKYVSDEAHGIF 541
Query: 550 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 609
F K NPE L+RAFSL ISNGKLSKFA TVA +GRL AKNMLA +C+T YAR+LEN+L+FP
Sbjct: 542 FSKYNPEALTRAFSLLISNGKLSKFAETVAFSGRLLAKNMLASECITGYARLLENMLSFP 601
Query: 610 SDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTK 669
SD LLPGP+S+L+Q WEWNLF KE++ T D+ M E + SSR +S+V LE+E++
Sbjct: 602 SDTLLPGPVSKLEQREWEWNLFNKELEQETDDLSGMYE--SLFSSRETSIVYSLEKEWSN 659
Query: 670 -----NITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIY 724
I+EN DT +E DWDVL +IES EE+ER+ E+LEERMD T WDDIY
Sbjct: 660 LVNSTIISENGTEILVPDTPTESDWDVLMEIESFEEHERVVKEELEERMDKTRGLWDDIY 719
Query: 725 RNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARR 784
R+ARKSE+ KFE+NERDEGELERTGQP S+ ARR
Sbjct: 720 RSARKSEKLKFESNERDEGELERTGQP---------------------------STKARR 752
Query: 785 LRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSL 844
RSDDVDAV+RL LLN ++Y++ILCEIGGMFSIA +VD IHKRPWIGFQSW AAGRKVSL
Sbjct: 753 SRSDDVDAVARLPLLNESYYQNILCEIGGMFSIAIRVDAIHKRPWIGFQSWHAAGRKVSL 812
Query: 845 SISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFED 904
S AEKVLEE QE DVMYFWA L MDGG T +N + LTFWSMCD+LNGG CRTAFED
Sbjct: 813 SFKAEKVLEEKTQEENKDVMYFWARLGMDGGVTGSNEE-LTFWSMCDVLNGGRCRTAFED 871
Query: 905 AFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSS 964
AFRQMY LPS++EALPPMPEDGG WSALH WVM TPSFLEFIMFSRMFVDSLDAL +NSS
Sbjct: 872 AFRQMYDLPSYLEALPPMPEDGGHWSALHSWVMPTPSFLEFIMFSRMFVDSLDALQSNSS 931
Query: 965 KVNSCLLSSSELE 977
+VN CLLSS+ELE
Sbjct: 932 QVNKCLLSSTELE 944
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18414574|ref|NP_568137.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] gi|15450503|gb|AAK96544.1| AT5g04480/T32M21_80 [Arabidopsis thaliana] gi|24111433|gb|AAN46867.1| At5g04480/T32M21_80 [Arabidopsis thaliana] gi|332003367|gb|AED90750.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/934 (58%), Positives = 685/934 (73%), Gaps = 42/934 (4%)
Query: 63 DDNAAAA------ATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQT---KPSLHRYL 113
DDN A A +GN D H SIRDR R KRN + +D++ + +PSL
Sbjct: 11 DDNGGAGRDGNHNANNVAGNGDTSFH--SIRDRLRLKRNSSDRRDRSHSGLDRPSLR--- 65
Query: 114 LRHRHVNSTPSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNS 173
R H+ G NRKG SL RG LLYF++ V AF M+S++LQNS
Sbjct: 66 TRPHHI------------GRSLNRKGLLSLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNS 113
Query: 174 IASVFGAERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLIL 229
I + G +G +R ++ GS LK+VP + G GLD LRS R GVRPPR+ L+L
Sbjct: 114 I-TWQGNVKGGQVRSQIGLGSTLKYVPGGIARTLIEGKGLDPLRSAVRIGVRPPRLALVL 172
Query: 230 GNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDW 289
GNM KD R+L+L+TV+KNLQKLGYVFK++AV +G + SLWEQ+AG + +L EQ DW
Sbjct: 173 GNMKKDPRTLMLVTVMKNLQKLGYVFKVFAVENGEARSLWEQLAGHVKVLVSEQLGHADW 232
Query: 290 SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349
+IF+G+IADSLEAKEAISSLMQEPF S+PL+WI+ ED LANRLPVY G +L+S+W+S
Sbjct: 233 TIFEGVIADSLEAKEAISSLMQEPFRSVPLIWIVHEDILANRLPVYQRMGQNSLISHWRS 292
Query: 350 VFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLK 409
F+R +V+VFP +TLPML+SVLD GNF VIP S DVWA E+YS++H K LR+ N F +
Sbjct: 293 AFARADVVVFPQFTLPMLHSVLDDGNFVVIPESVVDVWAAESYSETHTKQNLREINEFGE 352
Query: 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYND 469
D+++++V+GSSFFY+E SWD AVAMH +GPLL +Y RR GSFKFVFL GNST G +D
Sbjct: 353 DDVIILVLGSSFFYDEFSWDNAVAMHMLGPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSD 412
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
A+QEVASRLGL E +VRH+G N DVN VL MADI++Y SSQ EQ FP LIVRAM+FGIP+
Sbjct: 413 AVQEVASRLGLTEGTVRHFGLNEDVNRVLRMADILVYASSQEEQNFPPLIVRAMSFGIPI 472
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
ITPDFPI+K+Y+A+ IFF++++P+ L +AFS IS+G+LSKFA+T+AS+GRL KN+
Sbjct: 473 ITPDFPIMKKYMADEVHGIFFRRNDPDALLKAFSPLISDGRLSKFAQTIASSGRLLTKNL 532
Query: 590 LALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG 649
+A +C+T YAR+LEN+L+FPSD LPG ISQLQ +WEWN FR E++ IL+
Sbjct: 533 MATECITGYARLLENMLHFPSDTFLPGSISQLQVAAWEWNFFRSELEQPKSFILD----S 588
Query: 650 TSTSSRNSSVVDLLEEEF-----TKNITENENRSADQDTISELDWDVLHDIESSEEYERL 704
S +V +EE+F + N +N + S+LDWDVL +IE +EEYE++
Sbjct: 589 AYAFIGKSGIVFQVEEKFMGVIESTNPVDNNTLFVSDELPSKLDWDVLEEIEGAEEYEKV 648
Query: 705 EMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAW 764
E E+LE+RM+ W++IYRNARKSE+ KFE NERDEGELERTG+P+CIYEIY+G+GAW
Sbjct: 649 ESEELEDRMERDVEDWEEIYRNARKSEKLKFEVNERDEGELERTGEPLCIYEIYNGAGAW 708
Query: 765 PFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNI 824
PFLHHGSLYRGL+LSS RRL SDDVDA RL LLN T+YRDILCEIGGMFS+ANKVD+I
Sbjct: 709 PFLHHGSLYRGLSLSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSI 768
Query: 825 HKRPWIGFQSWRAAGRKVSLSISAEKVLEETV-QETEGDVMYFWAHLDMDGGFTRNNNDV 883
H RPWIGFQSWRAAGRKVSLS AE+ LE + QET+G+++YFW LD+DG + N
Sbjct: 769 HMRPWIGFQSWRAAGRKVSLSSKAEESLENIIKQETKGEIIYFWTRLDIDGDAYGSKN-A 827
Query: 884 LTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFL 943
LTFWSMCDILN G+CRT FEDAFR MYGLP H+EALPPMPEDG WS+LH WVM TPSFL
Sbjct: 828 LTFWSMCDILNQGNCRTTFEDAFRHMYGLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFL 887
Query: 944 EFIMFSRMFVDSLDALNANSSKVNSCLLSSSELE 977
EF+MFSRMF +SLDAL+ N + SC L+SS LE
Sbjct: 888 EFVMFSRMFSESLDALHNNLNDSKSCSLASSLLE 921
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810537|ref|XP_002873152.1| hypothetical protein ARALYDRAFT_487229 [Arabidopsis lyrata subsp. lyrata] gi|297318989|gb|EFH49411.1| hypothetical protein ARALYDRAFT_487229 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/907 (58%), Positives = 677/907 (74%), Gaps = 34/907 (3%)
Query: 84 HSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHR--HVNSTPSAANAATSGPRFNRKGFS 141
HSIRDR R KRN + +D++ + L R LR+R H+ + NRKG
Sbjct: 37 HSIRDRLRLKRNSSDRRDRSHS--GLDRPSLRNRPHHIARS------------LNRKGLI 82
Query: 142 SLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFVPD 201
SL RG LLYF++ V AF M+S++LQNSI +RG+ +R ++ GS LK+VP
Sbjct: 83 SLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNSITWQGNVKRGQ-VRSQIGLGSTLKYVPG 141
Query: 202 QVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKI 257
+ G GLD LRST R GVRPPR+ L+LGNM KD R+L+L+TV+KNLQKLGYVFK+
Sbjct: 142 GIARTLIEGEGLDPLRSTVRIGVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKV 201
Query: 258 YAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSI 317
+AV +G + SLWE +AG + +L EQ DW+IF+G+IADSLEAKEAISSLMQEPF S+
Sbjct: 202 FAVENGEARSLWEHLAGHVKVLVSEQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSV 261
Query: 318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377
PL+WI+ ED LAN+LPVY G +L+S+W+S F+R +V+VFP +TLPML+S+LD GNF
Sbjct: 262 PLIWIVHEDILANQLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHSILDDGNFV 321
Query: 378 VIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437
VIP S D+WA E+YS++H K +LR+ N F +++++++V+GSSFFYNE SWD AVAMH +
Sbjct: 322 VIPESVVDIWAAESYSETHTKQKLREINEFGEEDVIILVLGSSFFYNEFSWDNAVAMHML 381
Query: 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497
GPLL +Y RR SFKFVFL GNST G +DA+QEVA+RLGL E +VRH+G N DVN V
Sbjct: 382 GPLLTRYGRRKDTSNSFKFVFLYGNSTKGQSDAVQEVAARLGLTEGTVRHFGLNEDVNKV 441
Query: 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
L MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFP++K+Y+A+ IFF++++P+
Sbjct: 442 LRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPVMKKYLADEVHGIFFRRNDPDA 501
Query: 558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGP 617
L +AFS IS+G+LS+FA+T+AS+GRL KN++A +C+T YAR+LEN+L+FPSD LPG
Sbjct: 502 LLKAFSPLISDGRLSEFAQTIASSGRLLTKNLMATECITGYARLLENILHFPSDTFLPGS 561
Query: 618 ISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-----TKNIT 672
ISQLQ SWEW+ FR E++ IL+ S S +V +EE++ + N
Sbjct: 562 ISQLQGASWEWSFFRSELEQPKSFILD----SAYASIGKSGIVFQVEEKYMGVIESTNPV 617
Query: 673 ENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKSER 732
+N + S+LDWDVL +IE +EEYE +E E+LE+RM+ W++IYRNARKSE+
Sbjct: 618 DNSTLFVSDELPSKLDWDVLEEIEGAEEYENVESEELEDRMERDVEDWEEIYRNARKSEK 677
Query: 733 FKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSSAARRLRSDDVDA 792
KFE NERDEGELERTGQPVCIYEIY G+GAWPFLHHGSLYRGL+LSS RRL SDDVDA
Sbjct: 678 LKFEVNERDEGELERTGQPVCIYEIYDGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDA 737
Query: 793 VSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVL 852
RL LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSLS AE+ L
Sbjct: 738 ADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSLSSKAEESL 797
Query: 853 EETV-QETEGDVMYFWAHLDMDG-GFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMY 910
E + QET+G+++YFW LD+DG + R N LTFWSMCDILN G+CRT FEDAFR +Y
Sbjct: 798 ENIIKQETKGEIIYFWTRLDIDGDAYGRKN--ALTFWSMCDILNQGNCRTTFEDAFRHIY 855
Query: 911 GLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNANSSKVNSCL 970
GLP H+EALPPMPEDG WS+LH WVM TPSFLEF+MFSRMF +SLDAL+ N + SC
Sbjct: 856 GLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNLNDSKSCS 915
Query: 971 LSSSELE 977
L+SS LE
Sbjct: 916 LASSLLE 922
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441828|ref|XP_004138684.1| PREDICTED: uncharacterized protein LOC101206364 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/927 (59%), Positives = 689/927 (74%), Gaps = 43/927 (4%)
Query: 63 DDNAAAAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNST 122
DDNA+A A T + HSIRDRF FKRN +H + + K SL
Sbjct: 10 DDNASANAVTGT---------HSIRDRFPFKRNSSHF--RLRVKDSLDH----------- 47
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAF--AMASMVLQNSIASVFGA 180
+A+ + + R NRKG S P RG L YF++ AVF F + S+ S G+
Sbjct: 48 -AASRSRSHQTRINRKGLLSWIPARGQTLFYFLVVFAVFGFFTGSMLLQSSISLLSSHGS 106
Query: 181 ERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDS 236
+R R + E ++FGS LKFVP ++ G+GL+ +R R GVR PR+ LILG+M D
Sbjct: 107 QRERWLMERIKFGSSLKFVPGRISKRLVEGDGLEEVRKKDRVGVRAPRLALILGSMENDP 166
Query: 237 RSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGII 296
+SL+LITV+KN+QKLGYVF+I+AV GN S+WEQI GQ SIL Y +DWSI+DGII
Sbjct: 167 QSLMLITVMKNIQKLGYVFEIFAVERGNKQSMWEQI-GQPSILSPGHYGRVDWSIYDGII 225
Query: 297 ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356
ADSLE + AI+SLMQEPF S+PL+WI++ED+LA+RLP+Y +RG+++L+S+WK F R NV
Sbjct: 226 ADSLETEGAIASLMQEPFCSLPLIWIVREDTLASRLPMYEQRGWKHLISHWKRSFRRANV 285
Query: 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVV 416
+VFPD+ LPMLYS+LD GNF VIPGSPADV+A E Y H K QLR++NGF +D+I+V+V
Sbjct: 286 VVFPDFALPMLYSILDNGNFHVIPGSPADVYAAEDYMNVHSKSQLREKNGFNEDDILVLV 345
Query: 417 VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476
VGS FF NELSWDYAVAMH +GPLL YARR VEGSFKFVFLC NSTDG +DAL+E+AS
Sbjct: 346 VGSLFFPNELSWDYAVAMHSIGPLLSIYARRREVEGSFKFVFLCCNSTDGSHDALKEIAS 405
Query: 477 RLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI 536
RLGL + S+ HYG NGDVN VL+MADIVLYGSSQ Q FP L++RAM+FGIP++ PD P
Sbjct: 406 RLGLPDGSITHYGLNGDVNNVLMMADIVLYGSSQEIQSFPPLLIRAMSFGIPIMVPDLPA 465
Query: 537 IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596
+K Y+ +G + F K NP+ L +FS IS+GKLS+FA+++AS+GRL AKN+LA +CVT
Sbjct: 466 LKNYIVDGVHGVIFPKHNPDALLSSFSQMISDGKLSRFAQSIASSGRLLAKNILASECVT 525
Query: 597 RYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRN 656
YA++LENVLNFPSD LPGP+SQLQ +WEWNLFRKE+ + T D +E +T S+
Sbjct: 526 GYAQLLENVLNFPSDVKLPGPVSQLQLGAWEWNLFRKEM-VKTIDENADNEERIATISK- 583
Query: 657 SSVVDLLEEEFTKNI-----TENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEE 711
+SV+ LE + T ++ +ENEN + +QD + DWD+L IES+EEYE +EME+ +E
Sbjct: 584 ASVIFALEAQLTNSVNLTILSENENGTLEQDIPTPQDWDILEKIESAEEYETVEMEEFQE 643
Query: 712 RMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGS 771
RM+ +WD+IYRNARKSE+ KFE+NERDEGELERTGQ V IYEIYSG+GAWPF+HHGS
Sbjct: 644 RMERDLGAWDEIYRNARKSEKLKFESNERDEGELERTGQTVSIYEIYSGAGAWPFMHHGS 703
Query: 772 LYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIG 831
LYRGL+LS+ A RL+SDDV+AV RL LL+ ++Y D LCEIGGMF+IANK+DNIHKRPWIG
Sbjct: 704 LYRGLSLSTRALRLKSDDVNAVGRLPLLDDSYYLDALCEIGGMFAIANKIDNIHKRPWIG 763
Query: 832 FQSWRAAGRKVSLSISAEKVLEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMC 890
FQSW+A+GRKVSL AE VLE+T+Q+ +GDV+YFWAHL ++ G TFWS+C
Sbjct: 764 FQSWQASGRKVSLGKKAENVLEDTIQDNPKGDVIYFWAHLQVNRGTIPP-----TFWSVC 818
Query: 891 DILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSR 950
DILNGG CRT F FR+M+GL S++ ALPPMPEDGG WSALH WVM TPSFLEFIMFSR
Sbjct: 819 DILNGGLCRTTFRSTFREMFGLSSNMGALPPMPEDGGHWSALHSWVMPTPSFLEFIMFSR 878
Query: 951 MFVDSLDALNANSSKVNSCLLSSSELE 977
MF LDALN N S+ N CLL+SSE+E
Sbjct: 879 MFTHYLDALNRNQSQPNGCLLASSEIE 905
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449522726|ref|XP_004168377.1| PREDICTED: uncharacterized protein LOC101229264 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/927 (59%), Positives = 689/927 (74%), Gaps = 43/927 (4%)
Query: 63 DDNAAAAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVNST 122
DDNA+A A T + HSIRDRF FKRN +H + + K SL
Sbjct: 10 DDNASANAVTGT---------HSIRDRFPFKRNSSHF--RLRVKDSLDH----------- 47
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAF--AMASMVLQNSIASVFGA 180
+A+ + + R NRKG S P RG L YF++ AVF F + S+ S G+
Sbjct: 48 -AASRSRSHQTRINRKGLLSWIPARGQTLFYFLVVFAVFGFFTGSMLLQSSISLLSSHGS 106
Query: 181 ERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDS 236
+R R + E ++FGS LKFVP ++ G+GL+ +R R GVR PR+ LILG+M D
Sbjct: 107 QRERWLMERIKFGSSLKFVPGRISKRLVEGDGLEEVRKKDRVGVRAPRLALILGSMENDP 166
Query: 237 RSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGII 296
+SL+LITV+KN+QKLGYVF+I+AV GN S+WEQI GQ SIL Y +DWSI+DGII
Sbjct: 167 QSLMLITVMKNIQKLGYVFEIFAVERGNKQSMWEQI-GQPSILSPGHYGRVDWSIYDGII 225
Query: 297 ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356
ADSLE + AI+SLMQEPF S+PL+WI++ED+LA+RLP+Y +RG+++L+S+WK F R NV
Sbjct: 226 ADSLETEGAIASLMQEPFCSLPLIWIVREDTLASRLPMYEQRGWKHLISHWKRSFRRANV 285
Query: 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVV 416
+VFPD+ LPMLYS+LD GNF VIPGSPADV+A E Y H K QLR++NGF +D+I+V+V
Sbjct: 286 VVFPDFALPMLYSILDNGNFHVIPGSPADVYAAEDYMNVHSKSQLREKNGFNEDDILVLV 345
Query: 417 VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476
VGS FF NELSWDYAVAMH +GPLL YARR VEGSFKFVFLC NSTDG +DAL+E+AS
Sbjct: 346 VGSLFFPNELSWDYAVAMHSIGPLLSIYARRREVEGSFKFVFLCCNSTDGSHDALKEIAS 405
Query: 477 RLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI 536
RLGL + S+ HYG NGDVN VL+MADIVLYGSSQ Q FP L++RAM+FGIP++ PD P
Sbjct: 406 RLGLPDGSITHYGLNGDVNNVLMMADIVLYGSSQEIQSFPPLLIRAMSFGIPIMVPDLPA 465
Query: 537 IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596
+K Y+ +G + F K NP+ L +FS IS+GKLS+FA+++AS+GRL AKN+LA +CVT
Sbjct: 466 LKNYIVDGVHGVIFPKHNPDALLSSFSQMISDGKLSRFAQSIASSGRLLAKNILASECVT 525
Query: 597 RYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRN 656
YA++LENVLNFPSD LPGP+SQLQ +WEWNLFRKE+ + T D +E +T S+
Sbjct: 526 GYAQLLENVLNFPSDVKLPGPVSQLQLGAWEWNLFRKEM-VKTIDENADNEERIATISK- 583
Query: 657 SSVVDLLEEEFTKNI-----TENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEE 711
+SV+ LE + T ++ +ENEN + +QD + DWD+L IES+EEYE +EME+ +E
Sbjct: 584 ASVIFALEAQLTNSVNLTILSENENGTLEQDIPTPQDWDILEKIESAEEYETVEMEEFQE 643
Query: 712 RMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGS 771
RM+ +WD+IYRNARKSE+ KFE+NERDEGELERTGQ V IYEIYSG+GAWPF+HHGS
Sbjct: 644 RMERDLGAWDEIYRNARKSEKLKFESNERDEGELERTGQTVSIYEIYSGAGAWPFMHHGS 703
Query: 772 LYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIG 831
LYRGL+LS+ A RL+SDDV+AV RL LL+ ++Y D LCEIGGMF+IANK+DNIHKRPWIG
Sbjct: 704 LYRGLSLSTRALRLKSDDVNAVGRLPLLDDSYYLDALCEIGGMFAIANKIDNIHKRPWIG 763
Query: 832 FQSWRAAGRKVSLSISAEKVLEETVQET-EGDVMYFWAHLDMDGGFTRNNNDVLTFWSMC 890
FQSW+A+GRKVSL AE VLE+T+Q+ +GDV+YFWAHL ++ G TFWS+C
Sbjct: 764 FQSWQASGRKVSLGKKAENVLEDTIQDNPKGDVIYFWAHLQVNRGTIPP-----TFWSVC 818
Query: 891 DILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSR 950
DILNGG CRT F FR+M+GL S++ ALPPMPEDGG WSALH WVM TPSFLEFIMFSR
Sbjct: 819 DILNGGLCRTTFRSTFREMFGLSSNMGALPPMPEDGGHWSALHSWVMPTPSFLEFIMFSR 878
Query: 951 MFVDSLDALNANSSKVNSCLLSSSELE 977
MF LDALN N S+ N CLL+SSE+E
Sbjct: 879 MFTHYLDALNRNQSQPNGCLLASSEIE 905
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448875|ref|XP_002270269.1| PREDICTED: uncharacterized protein LOC100254795 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/874 (62%), Positives = 656/874 (75%), Gaps = 37/874 (4%)
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAER 182
P A + R F +++ F + + ++F+ MV+Q I E+
Sbjct: 44 PQGIRVARAHRGARRGSFCTMWRFLSGSIAFSVLFIVFL------MVMQTKIRV---PEQ 94
Query: 183 GRPIREELRFGSRLKF----VPDQVGFGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRS 238
G + ++ G LKF + + G NGLD LRS R GVR P + LILGNM K+ S
Sbjct: 95 GWSFLDGIKSGKSLKFGQGSLLRRFGQRNGLDHLRSEMRIGVRRPTLALILGNMKKNPPS 154
Query: 239 LLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIAD 298
L+L TV+KNLQ LGY+FKIYAV NS S+WEQ+ GQISIL E YS DW+ F+GII D
Sbjct: 155 LMLFTVIKNLQGLGYLFKIYAVHDDNSRSIWEQLGGQISILSPEIYSHNDWTTFEGIIVD 214
Query: 299 SLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358
SLEAKEAI SLMQEPF IPL+WIIQED+LA RLP Y + G+++L+SYW+S FSR +V+V
Sbjct: 215 SLEAKEAILSLMQEPFCFIPLIWIIQEDTLAKRLPFYEKLGWEHLVSYWRSAFSRADVVV 274
Query: 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG 418
FPD++LPMLYSVLD GNFFVIP SP DVWA E+YSK+H KYQLR++ GF KD+++V+VVG
Sbjct: 275 FPDFSLPMLYSVLDTGNFFVIPASPVDVWAAESYSKTHSKYQLREDLGFNKDDMLVLVVG 334
Query: 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478
SSFFY+ELSWDYAVAM+D+GPLL KYAR + F+FVFLCGNSTDGYND L+EVAS L
Sbjct: 335 SSFFYDELSWDYAVAMNDIGPLLSKYARSKNAGAMFRFVFLCGNSTDGYNDHLKEVASHL 394
Query: 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK 538
LL SVR YG N DVNG++LMAD+V+Y SSQVEQGFP L+ RAM+FGIPVI PD P I+
Sbjct: 395 KLLPGSVRQYGMNSDVNGLILMADVVIYASSQVEQGFPPLLTRAMSFGIPVIAPDLPDIR 454
Query: 539 EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598
+YV +G V+ F K+NP+ L RAFSL ISNGKLSKFA+ VA +GRL AKNMLA +CV Y
Sbjct: 455 KYVVDGVHVVIFPKNNPDALMRAFSLLISNGKLSKFAKAVALSGRLLAKNMLASECVNSY 514
Query: 599 ARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSS 658
A++LENVL+FPSD LLPG ISQ Q +WEWN FR T D+ ++ S S R SS
Sbjct: 515 AKLLENVLSFPSDVLLPGHISQSQHDAWEWNSFR------TADMPLIE--NGSASMRKSS 566
Query: 659 VVDLLEEEFTKNITEN--ENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGT 716
VVD+LEE + + N + D +++LDWDVL +IES EE ERLEME+LEERM+
Sbjct: 567 VVDVLEETLSNQLDSGNISNSETENDVLTQLDWDVLREIESIEEMERLEMEELEERMEKN 626
Query: 717 FASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGL 776
WD+IYRNARK ER KFE NERDEGELERTGQP+CIYEIY+G+GAWPFLHHGS+YRGL
Sbjct: 627 PGIWDEIYRNARKVERVKFETNERDEGELERTGQPLCIYEIYNGAGAWPFLHHGSMYRGL 686
Query: 777 ALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWR 836
+L+++ARRLRSDDVDAV RL +LN T+YRDI C+IGGMFSIA +VD IHKRPWIGFQSW
Sbjct: 687 SLTTSARRLRSDDVDAVDRLPVLNDTYYRDIFCDIGGMFSIAFRVDKIHKRPWIGFQSWH 746
Query: 837 AAGRKVSLSISAEKVLEETVQ-ETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNG 895
A G KVSLS AEKVLEET+Q ET+GDV+YFWAHL++D G T+ N + TFWSMCDILNG
Sbjct: 747 AVGSKVSLSSRAEKVLEETIQEETKGDVLYFWAHLNVDDGPTQKNR-IPTFWSMCDILNG 805
Query: 896 GHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDS 955
G+CRTAFEDAFRQMY +PS++EALPPMPEDGG WSALH WVM TPSFLEFIMFSRMF DS
Sbjct: 806 GNCRTAFEDAFRQMYAMPSYIEALPPMPEDGGYWSALHSWVMPTPSFLEFIMFSRMFADS 865
Query: 956 LDALN------------ANSSKVNSCLLSSSELE 977
LDAL+ NSS+ CLL SS+LE
Sbjct: 866 LDALHMNSRQSMNLSQSMNSSQPTVCLLGSSKLE 899
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147820655|emb|CAN65363.1| hypothetical protein VITISV_036074 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/883 (61%), Positives = 656/883 (74%), Gaps = 46/883 (5%)
Query: 123 PSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAER 182
P A + R F +++ F + + ++F+ MV+Q I E+
Sbjct: 44 PQGIRVARAHRGARRGSFCTMWRFLSGSIAFSVLFIVFL------MVMQTKIRV---PEQ 94
Query: 183 GRPIREELRFGSRLKF----VPDQVGFGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRS 238
G + ++ G LKF + + G NGLD LRS R GVR P + LILGNM K+ S
Sbjct: 95 GWSFLDGIKSGKSLKFGQGSLLRRFGQRNGLDHLRSEMRIGVRRPXLALILGNMKKNPPS 154
Query: 239 LLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIAD 298
L+L TV+KNLQ LGY+FKIYAV NS S+WEQ+ GQISIL E YS DW+ F+GII D
Sbjct: 155 LMLFTVIKNLQGLGYLFKIYAVXDDNSRSIWEQLGGQISILSPEIYSHNDWTTFEGIIVD 214
Query: 299 SLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358
SLEAKEAI SLMQEPF IPL+WIIQED+LA RLP Y + G+++L+SYW+S FSR +V+V
Sbjct: 215 SLEAKEAILSLMQEPFCFIPLIWIIQEDTLAKRLPFYEKLGWEHLVSYWRSAFSRADVVV 274
Query: 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG 418
FPD++LPMLYSVLD GNFFVIP SP DVWA E+YSK+H KYQLR++ GF KD+++V+VVG
Sbjct: 275 FPDFSLPMLYSVLDTGNFFVIPASPVDVWAAESYSKTHSKYQLREDLGFNKDDMLVLVVG 334
Query: 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---------GYND 469
SSFFY+ELSWDYAVAM+D+GPLL KYAR + +FVFLCGNSTD GYND
Sbjct: 335 SSFFYDELSWDYAVAMNDIGPLLSKYARSKNAGAMXRFVFLCGNSTDGYNDHLKVYGYND 394
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
L+EVAS L LL SVR YG N DVNG++LMAD+V+Y SSQVEQGFP L+ RAM+FGIPV
Sbjct: 395 HLKEVASHLKLLPGSVRQYGMNSDVNGLMLMADVVIYASSQVEQGFPPLLTRAMSFGIPV 454
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
I PD P I++YV +G V+ F K+NP+ L RAFSL ISNGKLSKFA+ VA +GRL AKNM
Sbjct: 455 IAPDLPDIRKYVVDGVHVVIFPKNNPDALMRAFSLLISNGKLSKFAKAVALSGRLLAKNM 514
Query: 590 LALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG 649
LA +CV YA++LENVL+FPSD LLPG ISQ Q +WEWN FR T D+ ++
Sbjct: 515 LASECVNSYAKLLENVLSFPSDVLLPGHISQSQHDAWEWNSFR------TADMPLIE--N 566
Query: 650 TSTSSRNSSVVDLLEEEFTKNITEN--ENRSADQDTISELDWDVLHDIESSEEYERLEME 707
S S R SSVVD+LEE + + N + D +++LDWDVL +IES EE ERLEME
Sbjct: 567 GSASMRKSSVVDVLEETLSNQLDSGNISNSETENDVLTQLDWDVLREIESIEEMERLEME 626
Query: 708 QLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFL 767
+LEERM+ WD+IYRNARK ER KFEANERDEGELERTGQP+CIYEIY+G+GAWPFL
Sbjct: 627 ELEERMEKNPGIWDEIYRNARKVERVKFEANERDEGELERTGQPLCIYEIYNGAGAWPFL 686
Query: 768 HHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKR 827
HHGS+YRGL+L+++ARRLRSDDVDAV RL +LN T+YRDI C+IGGMFSIA +VD IHKR
Sbjct: 687 HHGSMYRGLSLTTSARRLRSDDVDAVDRLPVLNDTYYRDIFCDIGGMFSIAFRVDKIHKR 746
Query: 828 PWIGFQSWRAAGRKVSLSISAEKVLEETVQ-ETEGDVMYFWAHLDMDGGFTRNNNDVLTF 886
PWIGFQSW A G KVSLS AEKVLEET+Q ET+GDV+YFWAHL++D G T+ N + TF
Sbjct: 747 PWIGFQSWHAVGSKVSLSSRAEKVLEETIQEETKGDVLYFWAHLNVDDGPTQKNR-IPTF 805
Query: 887 WSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFI 946
WSMCDILNGG+CRTAFEDAFRQMY +PS++EALPPMPEDGG WSALH WVM TPSFLEFI
Sbjct: 806 WSMCDILNGGNCRTAFEDAFRQMYAMPSYIEALPPMPEDGGYWSALHSWVMPTPSFLEFI 865
Query: 947 MFSRMFVDSLDALN------------ANSSKVNSCLLSSSELE 977
MFSRMF DSLDAL+ NSS+ CLL SS+LE
Sbjct: 866 MFSRMFADSLDALHMNSRQSMNLSQSMNSSQPTVCLLGSSKLE 908
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334187426|ref|NP_001190226.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] gi|332003368|gb|AED90751.1| UDP-glycosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/934 (57%), Positives = 670/934 (71%), Gaps = 57/934 (6%)
Query: 63 DDNAAAA------ATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQT---KPSLHRYL 113
DDN A A +GN D H SIRDR R KRN + +D++ + +PSL
Sbjct: 11 DDNGGAGRDGNHNANNVAGNGDTSFH--SIRDRLRLKRNSSDRRDRSHSGLDRPSLR--- 65
Query: 114 LRHRHVNSTPSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNS 173
R H+ G NRKG SL RG LLYF++ V AF M+S++LQNS
Sbjct: 66 TRPHHI------------GRSLNRKGLLSLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNS 113
Query: 174 IASVFGAERGRPIREELRFGSRLKFVPDQVGF----GNGLDGLRSTPRFGVRPPRIGLIL 229
I + G +G +R ++ GS LK+VP + G GLD LRS R GVRPPR+ L+L
Sbjct: 114 I-TWQGNVKGGQVRSQIGLGSTLKYVPGGIARTLIEGKGLDPLRSAVRIGVRPPRLALVL 172
Query: 230 GNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDW 289
GNM KD R+L+L+ +AV +G + SLWEQ+AG + +L EQ DW
Sbjct: 173 GNMKKDPRTLMLV---------------FAVENGEARSLWEQLAGHVKVLVSEQLGHADW 217
Query: 290 SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349
+IF+G+IADSLEAKEAISSLMQEPF S+PL+WI+ ED LANRLPVY G +L+S+W+S
Sbjct: 218 TIFEGVIADSLEAKEAISSLMQEPFRSVPLIWIVHEDILANRLPVYQRMGQNSLISHWRS 277
Query: 350 VFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLK 409
F+R +V+VFP +TLPML+SVLD GNF VIP S DVWA E+YS++H K LR+ N F +
Sbjct: 278 AFARADVVVFPQFTLPMLHSVLDDGNFVVIPESVVDVWAAESYSETHTKQNLREINEFGE 337
Query: 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYND 469
D+++++V+GSSFFY+E SWD AVAMH +GPLL +Y RR GSFKFVFL GNST G +D
Sbjct: 338 DDVIILVLGSSFFYDEFSWDNAVAMHMLGPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSD 397
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
A+QEVASRLGL E +VRH+G N DVN VL MADI++Y SSQ EQ FP LIVRAM+FGIP+
Sbjct: 398 AVQEVASRLGLTEGTVRHFGLNEDVNRVLRMADILVYASSQEEQNFPPLIVRAMSFGIPI 457
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
ITPDFPI+K+Y+A+ IFF++++P+ L +AFS IS+G+LSKFA+T+AS+GRL KN+
Sbjct: 458 ITPDFPIMKKYMADEVHGIFFRRNDPDALLKAFSPLISDGRLSKFAQTIASSGRLLTKNL 517
Query: 590 LALDCVTRYARILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWG 649
+A +C+T YAR+LEN+L+FPSD LPG ISQLQ +WEWN FR E++ IL+
Sbjct: 518 MATECITGYARLLENMLHFPSDTFLPGSISQLQVAAWEWNFFRSELEQPKSFILD----S 573
Query: 650 TSTSSRNSSVVDLLEEEF-----TKNITENENRSADQDTISELDWDVLHDIESSEEYERL 704
S +V +EE+F + N +N + S+LDWDVL +IE +EEYE++
Sbjct: 574 AYAFIGKSGIVFQVEEKFMGVIESTNPVDNNTLFVSDELPSKLDWDVLEEIEGAEEYEKV 633
Query: 705 EMEQLEERMDGTFASWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAW 764
E E+LE+RM+ W++IYRNARKSE+ KFE NERDEGELERTG+P+CIYEIY+G+GAW
Sbjct: 634 ESEELEDRMERDVEDWEEIYRNARKSEKLKFEVNERDEGELERTGEPLCIYEIYNGAGAW 693
Query: 765 PFLHHGSLYRGLALSSAARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNI 824
PFLHHGSLYRGL+LSS RRL SDDVDA RL LLN T+YRDILCEIGGMFS+ANKVD+I
Sbjct: 694 PFLHHGSLYRGLSLSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSI 753
Query: 825 HKRPWIGFQSWRAAGRKVSLSISAEKVLEETV-QETEGDVMYFWAHLDMDGGFTRNNNDV 883
H RPWIGFQSWRAAGRKVSLS AE+ LE + QET+G+++YFW LD+DG + N
Sbjct: 754 HMRPWIGFQSWRAAGRKVSLSSKAEESLENIIKQETKGEIIYFWTRLDIDGDAYGSKN-A 812
Query: 884 LTFWSMCDILNGGHCRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFL 943
LTFWSMCDILN G+CRT FEDAFR MYGLP H+EALPPMPEDG WS+LH WVM TPSFL
Sbjct: 813 LTFWSMCDILNQGNCRTTFEDAFRHMYGLPEHIEALPPMPEDGHHWSSLHNWVMPTPSFL 872
Query: 944 EFIMFSRMFVDSLDALNANSSKVNSCLLSSSELE 977
EF+MFSRMF +SLDAL+ N + SC L+SS LE
Sbjct: 873 EFVMFSRMFSESLDALHNNLNDSKSCSLASSLLE 906
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1013 | ||||||
| TAIR|locus:2184437 | 1050 | AT5G04480 [Arabidopsis thalian | 0.846 | 0.816 | 0.571 | 2.6e-269 | |
| TAIR|locus:2124953 | 1031 | AT4G01210 [Arabidopsis thalian | 0.422 | 0.415 | 0.343 | 3.6e-135 |
| TAIR|locus:2184437 AT5G04480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2590 (916.8 bits), Expect = 2.6e-269, P = 2.6e-269
Identities = 508/889 (57%), Positives = 634/889 (71%)
Query: 84 HSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHR--HVXXXXXXXXXXXXGPRFNRKGFS 141
HSIRDR R KRN + +D++ + L R LR R H+ G NRKG
Sbjct: 36 HSIRDRLRLKRNSSDRRDRSHS--GLDRPSLRTRPHHI------------GRSLNRKGLL 81
Query: 142 SLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFVPD 201
SL RG LLYF++ V AF M+S++LQNSI G +G +R ++ GS LK+VP
Sbjct: 82 SLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNSITWQ-GNVKGGQVRSQIGLGSTLKYVPG 140
Query: 202 QVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKI 257
+ G GLD LRS R GVRPPR+ L+LGNM KD R+L+L+TV+KNLQKLGYVFK+
Sbjct: 141 GIARTLIEGKGLDPLRSAVRIGVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKV 200
Query: 258 YAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSI 317
+AV +G + SLWEQ+AG + +L EQ DW+IF+G+IADSLEAKEAISSLMQEPF S+
Sbjct: 201 FAVENGEARSLWEQLAGHVKVLVSEQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSV 260
Query: 318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377
PL+WI+ ED LANRLPVY G +L+S+W+S F+R +V+VFP +TLPML+SVLD GNF
Sbjct: 261 PLIWIVHEDILANRLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHSVLDDGNFV 320
Query: 378 VIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437
VIP S DVWA E+YS++H K LR+ N F +D+++++V+GSSFFY+E SWD AVAMH +
Sbjct: 321 VIPESVVDVWAAESYSETHTKQNLREINEFGEDDVIILVLGSSFFYDEFSWDNAVAMHML 380
Query: 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497
GPLL +Y RR GSFKFVFL GNST G +DA+QEVASRLGL E +VRH+G N DVN V
Sbjct: 381 GPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFGLNEDVNRV 440
Query: 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
L MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFPI+K+Y+A+ IFF++++P+
Sbjct: 441 LRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIFFRRNDPDA 500
Query: 558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGP 617
L +AFS IS+G+LSKFA+T+AS+GRL KN++A +C+T YAR+LEN+L+FPSD LPG
Sbjct: 501 LLKAFSPLISDGRLSKFAQTIASSGRLLTKNLMATECITGYARLLENMLHFPSDTFLPGS 560
Query: 618 ISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-----TKNIT 672
ISQLQ +WEWN FR E++ IL+ S +V +EE+F + N
Sbjct: 561 ISQLQVAAWEWNFFRSELEQPKSFILD----SAYAFIGKSGIVFQVEEKFMGVIESTNPV 616
Query: 673 ENENRSADQDTISELDWDVLHDIXXXXXXXXXXXXXXXXXXDGTFASWDDIYRNARKSER 732
+N + S+LDWDVL +I + W++IYRNARKSE+
Sbjct: 617 DNNTLFVSDELPSKLDWDVLEEIEGAEEYEKVESEELEDRMERDVEDWEEIYRNARKSEK 676
Query: 733 FKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXXXXXXXXXXXXXXXX 792
KFE NERDEGELERTG+P+CIYEIY+G+GAWPFLHHGSLYRG
Sbjct: 677 LKFEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDA 736
Query: 793 XXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVL 852
L LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSLS AE+ L
Sbjct: 737 ADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSLSSKAEESL 796
Query: 853 EETV-QETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYG 911
E + QET+G+++YFW LD+DG + N LTFWSMCDILN G+CRT FEDAFR MYG
Sbjct: 797 ENIIKQETKGEIIYFWTRLDIDGDAYGSKN-ALTFWSMCDILNQGNCRTTFEDAFRHMYG 855
Query: 912 LPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALN 960
LP H+EALPPMPEDG WS+LH WVM TPSFLEF+MFSRMF +SLDAL+
Sbjct: 856 LPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALH 904
|
|
| TAIR|locus:2124953 AT4G01210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 725 (260.3 bits), Expect = 3.6e-135, Sum P(2) = 3.6e-135
Identities = 154/448 (34%), Positives = 258/448 (57%)
Query: 196 LKFVPDQVGFGNGLDGLRST-PRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYV 254
+KF D GF L +T RFG R P++ L+ G++ D +L++++ K LQ++GY
Sbjct: 119 MKFQRDAHGFNFTSSSLNTTLQRFGFRKPKLALVFGDLLADPEQVLMVSLSKALQEVGYA 178
Query: 255 FKIYAVRSGNSHSLWEQIAGQISIL--GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQE 312
++Y++ G +S+W+++ ++IL QE +IDW +DGII +SL A+ + MQE
Sbjct: 179 IEVYSLEDGPVNSIWQKMGVPVTILKPNQESSCVIDWLSYDGIIVNSLRARSMFTCFMQE 238
Query: 313 PFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLD 372
PF S+PL+W+I E++LA R Y G LL+ WK +FSR +V+VF +Y LP+LY+ D
Sbjct: 239 PFKSLPLIWVINEETLAVRSRQYNSTGQTELLTDWKKIFSRASVVVFHNYLLPILYTEFD 298
Query: 373 AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432
AGNF+VIPGSP +V +K+ E + +K D++V+ +VGS F Y ++A+
Sbjct: 299 AGNFYVIPGSPEEV----CKAKNLE-FPPQK------DDVVISIVGSQFLYKGQWLEHAL 347
Query: 433 AMHDVGPLLI-KYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN 491
+ + PL Y ++ K + L G + Y+ A++ ++ L + +V+H
Sbjct: 348 LLQALRPLFSGNYLESDN--SHLKIIVLGGETASNYSVAIETISQNLTYPKEAVKHVRVA 405
Query: 492 GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQ 551
G+V+ +L +D+V+YGS EQ FP ++++AM+ G P++ PD I++YV + F
Sbjct: 406 GNVDKILESSDLVIYGSFLEEQSFPEILMKAMSLGKPIVAPDLFNIRKYVDDRVTGYLFP 465
Query: 552 KDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611
K N + LS+ I+ GK+S A+ +A G+ KNM+A + + YA +LEN+L F S+
Sbjct: 466 KQNLKVLSQVVLEVITEGKISPLAQKIAMMGKTTVKNMMARETIEGYAALLENMLKFSSE 525
Query: 612 ALLPGPISQLQ---QVSWEWNLFRKEID 636
P + ++ + W W+ F +D
Sbjct: 526 VASPKDVQKVPPELREEWSWHPFEAFMD 553
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1013 | |||
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-11 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-08 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-06 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 6e-06 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-05 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-04 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 2e-04 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 6e-04 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 7e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 0.001 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 0.004 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 5e-11
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGV 497
LL++ + + + G+ L+++A +LGL ++ V GF + D+ +
Sbjct: 19 LLLEAFALLKEQHPNLKLVIVGD--GEEEKKLKKLALKLGLEDN-VIFVGFVPDEDLIEL 75
Query: 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
+AD+ + S+ E GF +++ AM G+PVI D E V +G + + E
Sbjct: 76 YRIADLFVL-PSRYE-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEA 133
Query: 558 LSRAFSLFISNGKLSK 573
L+ A + + +L +
Sbjct: 134 LAEAIEKLLKDEELRE 149
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 57.3 bits (137), Expect = 2e-08
Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 465 DGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRA 522
+ L+++A +LGL ++ V+ G+ + ++ +L AD+ + S + +GF +++ A
Sbjct: 240 PERREELEKLAKKLGLEDN-VKFLGYVPDEELAELLASADVFVLPS--LSEGFGLVLLEA 296
Query: 523 MTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582
M G PVI D I E V +G + + E L+ A + + +L + A
Sbjct: 297 MAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPEL---REELGEAA 353
Query: 583 RLHAKNMLALD-CVTRYARILENVLN 607
R + + + + + E +L
Sbjct: 354 RERVEEEFSWERIAEQLLELYEELLA 379
|
Length = 381 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 2e-06
Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 39/262 (14%)
Query: 334 VYVERGFQNLLSYW--KSVFSRVNVIVF---PDYTLPMLYSVLDAGNFFVIPGSPADVWA 388
V+ G + L + + ++F D L + ++ +IPGS D+
Sbjct: 117 VFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDL-- 174
Query: 389 VEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARR- 447
+ +S S E +D+ V + V L D + L++ AR
Sbjct: 175 -DRFSPSPEPI--------PEDDPVFLFVA------RLLKDKGIDE------LLEAARIL 213
Query: 448 NSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLY 506
+ + + + L G+ + A+ E+ LE V GF DV +L AD+ VL
Sbjct: 214 KAKGPNVRLL-LVGDGDEENPAAILEIEKLG--LEGRVEFLGFRDDVPELLAAADVFVL- 269
Query: 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566
S E G P +++ AM G PVI D P +E V +G + E L+ A I
Sbjct: 270 -PSYRE-GLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI 327
Query: 567 SNGKLSKFARTVASAGRLHAKN 588
+ +L + A R A+
Sbjct: 328 EDPEL---RARMGQAARKRAEE 346
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 6e-06
Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 41/216 (18%)
Query: 400 QLRKENGFLKDEIVVVVVGSSFFYNELSW----DYAV-AMHDVGPLLIKYARRNSVEGSF 454
R+ G +DE V++ VG L D + A+ L K
Sbjct: 188 AARRRLGIPEDEPVILFVGR------LVPRKGVDLLLEAL----AKLRKEYPD------V 231
Query: 455 KFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYGFNG-----DVNGVLLMADIVLYGS 508
+ V + G DG + L+ +A+ LGL + V F G D+ + AD+ +
Sbjct: 232 RLV-IVG---DGPLREELEALAAELGLGDR-VT---FLGFVPDEDLPALYAAADVFVL-P 282
Query: 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568
S E GF +++ AM G+PV+ D I E V +G + +PE L+ A + +
Sbjct: 283 SLYE-GFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDD 341
Query: 569 GKLSKFARTVASAGRLHAKNMLALD-CVTRYARILE 603
+L R + A R + D R +
Sbjct: 342 PEL---RRRLGEAARERVAERFSWDRVAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
+ L+ +A LGL V GF + L AD+ VL SS+ E GFP++++ AM G
Sbjct: 233 EELEALAKELGL-ADRVHFLGFQSNPYPYLKAADLFVL--SSRYE-GFPNVLLEAMALGT 288
Query: 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRA 561
PV+ D P +E + +G + + L+ A
Sbjct: 289 PVVATDCPGPREILEDGENGLLVPVGDEAALAAA 322
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 465 DGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLM---ADIVLYGSSQVEQGFPSLIVR 521
+ L+E+ + L LL+ V G + L+ AD+ + S E GF +++
Sbjct: 144 GPEREYLEELLAALLLLDR-VIFLGGLDPEELLALLLAAADVFVL-PSLRE-GFGLVVLE 200
Query: 522 AMTFGIPVITPDFPIIKEYVAEGAQVIFF 550
AM G+PVI D E V +G +
Sbjct: 201 AMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 2e-04
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVE 512
+ + L G+ D L+ +A + LE V G DV +L D+ VL SS E
Sbjct: 225 ARLL-LVGDGPD--RANLELLALKELGLEDKVILLGERSDVPALLNALDVFVL--SSLSE 279
Query: 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572
GFP++++ AM G+PV+ D E V G +PE L+ A +++ L
Sbjct: 280 -GFPNVLLEAMACGLPVVATDVGDNAELV--GDTGFLVPPGDPEALAEAIEALLADPAL- 335
Query: 573 KFARTVASAGRLHAKNMLALD-CVTRYARILE 603
+ + A R + +++ V Y +
Sbjct: 336 --RQALGEAARERIEENFSIEAMVEAYEELYR 365
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 6e-04
Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 15/147 (10%)
Query: 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVN--GVLLMADIVLYGSSQV 511
+ V + G GY L+++A+ LGL E V G + L AD+ + S
Sbjct: 235 WHLV-IAGPDEGGYRAELKQIAAALGL-EDRVTFTGMLYGEDKAAALADADLFVLPSHS- 291
Query: 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571
+ F ++ A+ G PV+T D +E + G + D+ + L+ A + +
Sbjct: 292 -ENFGIVVAEALACGTPVVTTDKVPWQELIEYGCGWVV--DDDVDALAAALRRALELPQR 348
Query: 572 SKFARTVASAGRL-------HAKNMLA 591
K A A+ +L
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 7e-04
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
+AL+ + LGL E V GF ++ A I VL +S+ E GFP +++ AM FG+
Sbjct: 222 EALEALIKELGL-EDRVILLGFTKNIEEYYAKASIFVL--TSRFE-GFPMVLLEAMAFGL 277
Query: 528 PVITPDFP-----IIKE----YVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571
PVI+ D P II++ + + E L+ A + + +L
Sbjct: 278 PVISFDCPTGPSEIIEDGVNGLLVPN--------GDVEALAEALLRLMEDEEL 322
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Query: 470 ALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529
A +++ GL H V G DV ++ D+ + S + +G + I+ AM G+PV
Sbjct: 243 ACEQMVRAAGL-AHLVWLPGERDDVPALMQALDLFVLPS--LAEGISNTILEAMASGLPV 299
Query: 530 ITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNM 589
I E V G + L+RA ++S+ R +AGR A+
Sbjct: 300 IATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAA---RRAHGAAGRARAEQQ 356
Query: 590 LALDC-VTRYARILENVL 606
+++ V YA + + +L
Sbjct: 357 FSINAMVAAYAGLYDQLL 374
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.004
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
L+ + LGL + V+ G D+ AD+ VL SS E GF ++ AM +
Sbjct: 232 ATLERLIKALGL-SNRVKLLGLRDDIAAYYNAADLFVL--SSAWE-GFGLVVAEAMACEL 287
Query: 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRA 561
PV+ D ++E V + ++ +PE L+
Sbjct: 288 PVVATDAGGVREVVGDSGLIV--PISDPEALANK 319
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1013 | |||
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.98 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.98 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.98 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.98 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.97 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.97 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.97 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.97 | |
| PLN00142 | 815 | sucrose synthase | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.96 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.96 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.96 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.96 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.95 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.94 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.94 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.94 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.93 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.93 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.93 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.93 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.92 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.9 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.9 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.9 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.9 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.89 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.88 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.88 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.88 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.88 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.87 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.86 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.84 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.81 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.81 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.8 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.8 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.79 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.77 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.75 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.73 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.7 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.69 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.66 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.65 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.54 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.52 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.5 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.48 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.43 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.33 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.28 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.18 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.1 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.08 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.03 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.01 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.01 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.0 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.88 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.8 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.79 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.79 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.72 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.69 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.62 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 98.61 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.61 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.54 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.53 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.52 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.44 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.4 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.38 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.35 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.29 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.1 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.04 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.99 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.88 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.69 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.39 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.36 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.24 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 97.13 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.07 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 96.88 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.85 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 96.78 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 96.72 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 96.63 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.6 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.46 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 96.3 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 96.27 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 96.17 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.03 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.94 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 95.86 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 95.82 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 95.81 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 95.78 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.73 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 95.57 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.42 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 95.41 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 95.02 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 94.43 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 94.22 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 94.13 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 94.12 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 93.8 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 93.75 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 93.7 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 93.67 | |
| PLN02208 | 442 | glycosyltransferase family protein | 93.43 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 93.21 | |
| PLN02764 | 453 | glycosyltransferase family protein | 93.03 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 92.86 | |
| PLN00414 | 446 | glycosyltransferase family protein | 92.76 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 92.51 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 91.72 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 91.32 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 91.27 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 91.09 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 89.62 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 89.46 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 88.07 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 87.02 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 86.25 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 85.41 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 83.63 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 81.74 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 80.4 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=325.50 Aligned_cols=349 Identities=17% Similarity=0.179 Sum_probs=266.4
Q ss_pred CCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCC-CchHH------------------HHHHHHHHHHHhhc
Q 001781 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG-NSHSL------------------WEQIAGQISILGQE 282 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g-~~~~~------------------~r~i~~Li~lLk~~ 282 (1013)
+++|++|+..+..||.+.+++++++.|.+.||++.+++..+. ..... +..+..+.+++++.
T Consensus 1 ~~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l~~~ 80 (374)
T TIGR03088 1 RPLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQL 80 (374)
T ss_pred CceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCCCCCChHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999988875432 21110 12344577888899
Q ss_pred CccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCc-EEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcC
Q 001781 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP-LVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1013)
Q Consensus 283 kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IP-VI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S 361 (1013)
+||+||+|...... ..+.++.. ++| .+++.|+........ ......++.++ ....+|.+++.+
T Consensus 81 ~~Divh~~~~~~~~-~~~~~~~~----------~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~i~vs 144 (374)
T TIGR03088 81 RPDIVHTRNLAALE-AQLPAALA----------GVPARIHGEHGRDVFDLDG---SNWKYRWLRRL--YRPLIHHYVAVS 144 (374)
T ss_pred CCCEEEEcchhHHH-HHHHHHhc----------CCCeEEEeecCcccccchh---hHHHHHHHHHH--HHhcCCeEEEeC
Confidence 99999998765433 23333222 234 355656543221110 00011122222 234578888888
Q ss_pred CCchhhh---ccCCCCCEEEeCCCCCCcccccccCcch-hHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHH
Q 001781 362 YTLPMLY---SVLDAGNFFVIPGSPADVWAVEAYSKSH-EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1013)
Q Consensus 362 ~~~~~ly---~~l~~~ki~VIPnggVDl~~~~~F~p~~-~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAf 437 (1013)
....... .+++..++.+|||+ +|. +.|.+.. .....+.....+++.++|+++||+.+ +||++.+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~vi~ng-vd~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~----~Kg~~~li~a~ 216 (374)
T TIGR03088 145 RDLEDWLRGPVKVPPAKIHQIYNG-VDT---ERFHPSRGDRSPILPPDFFADESVVVGTVGRLQA----VKDQPTLVRAF 216 (374)
T ss_pred HHHHHHHHHhcCCChhhEEEeccC-ccc---cccCCCccchhhhhHhhcCCCCCeEEEEEecCCc----ccCHHHHHHHH
Confidence 7665542 24566789999997 876 6665432 22233334445667889999999966 89999999999
Q ss_pred HHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccH
Q 001781 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPS 517 (1013)
Q Consensus 438 a~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGi 517 (1013)
..+.++.++ ..++++ ++++|+|+.. +.++++++++++.+ +|.|.|+.+++..+|+.||++|+||..| |||+
T Consensus 217 ~~l~~~~~~---~~~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~pS~~E--g~~~ 287 (374)
T TIGR03088 217 ALLVRQLPE---GAERLR-LVIVGDGPAR--GACEQMVRAAGLAH-LVWLPGERDDVPALMQALDLFVLPSLAE--GISN 287 (374)
T ss_pred HHHHHhCcc---cccceE-EEEecCCchH--HHHHHHHHHcCCcc-eEEEcCCcCCHHHHHHhcCEEEeccccc--cCch
Confidence 998765421 114788 5799998865 88999999999987 8999999999999999999999999988 9999
Q ss_pred HHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-HhhcHHHHHH
Q 001781 518 LIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLALDCVT 596 (1013)
Q Consensus 518 vVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs~e~~~~ 596 (1013)
+++|||+||+|||+|+.||.+|++.++.+|++++++|+++++++|.+++++++. +.+|++++++.+ ++|+|+.+++
T Consensus 288 ~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~---~~~~~~~a~~~~~~~fs~~~~~~ 364 (374)
T TIGR03088 288 TILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAA---RRAHGAAGRARAEQQFSINAMVA 364 (374)
T ss_pred HHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876 488999999966 6899999999
Q ss_pred HHHHHHHHHh
Q 001781 597 RYARILENVL 606 (1013)
Q Consensus 597 ~y~~Lye~lL 606 (1013)
+|.++|++++
T Consensus 365 ~~~~~y~~~~ 374 (374)
T TIGR03088 365 AYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHhC
Confidence 9999998763
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=329.83 Aligned_cols=346 Identities=13% Similarity=0.154 Sum_probs=260.5
Q ss_pred CCCCEEEEEeccc---CCCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHH----------------------HHHHHH
Q 001781 220 VRPPRIGLILGNM---AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL----------------------WEQIAG 274 (1013)
Q Consensus 220 ~r~~RIalI~g~l---~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~----------------------~r~i~~ 274 (1013)
.+++||++++... ..+|.+..+.++++.|.+.||+|.+++...+..... +.....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSLALSPR 135 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCccccCceeeccCCcCCccCCCceeeccCCHH
Confidence 6789999997533 348889999999999999999999998754321000 000113
Q ss_pred HHHHHhhcCccEEEEcCcchHHH-HHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHH-HHHHHHhc
Q 001781 275 QISILGQEQYSLIDWSIFDGIIA-DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLL-SYWKSVFS 352 (1013)
Q Consensus 275 Li~lLk~~kpDIIh~~~~~~~lv-~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klL-s~~~~~l~ 352 (1013)
+.+.+++.+||+||++....... ..+.++. .++|+|++.|+.... ....+...++.+.+ ...+..++
T Consensus 136 l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~----------~~ip~V~~~h~~~~~-~~~~~~~~~~~~~~~~~~r~~~~ 204 (465)
T PLN02871 136 IISEVARFKPDLIHASSPGIMVFGALFYAKL----------LCVPLVMSYHTHVPV-YIPRYTFSWLVKPMWDIIRFLHR 204 (465)
T ss_pred HHHHHHhCCCCEEEECCCchhHHHHHHHHHH----------hCCCEEEEEecCchh-hhhcccchhhHHHHHHHHHHHHh
Confidence 56788889999999987543332 2233332 358999999974211 11111111111111 11123467
Q ss_pred cccEEEEcCCCchhhhcc---CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcC-CCCCcEEEEEEccCCCcCcccc
Q 001781 353 RVNVIVFPDYTLPMLYSV---LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENG-FLKDEIVVVVVGSSFFYNELSW 428 (1013)
Q Consensus 353 ~AD~VI~~S~~~~~ly~~---l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lg-i~~d~~vIL~VGRl~~yk~~~K 428 (1013)
.+|.+++.+......+.. .+..++.+|||+ +|. +.|.+.......+.++. ..+++++|+++||+.+ .|
T Consensus 205 ~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nG-vd~---~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~----~K 276 (465)
T PLN02871 205 AADLTLVTSPALGKELEAAGVTAANRIRVWNKG-VDS---ESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGA----EK 276 (465)
T ss_pred hCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCc-cCc---cccCCccccHHHHHHhcCCCCCCeEEEEeCCCch----hh
Confidence 799999998776655322 236789999996 887 77766444445565553 3457789999999866 79
Q ss_pred CHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEE
Q 001781 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLY 506 (1013)
Q Consensus 429 g~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVl 506 (1013)
|++.+++++..+ ++++ ++|+|+|+.. +.++++++. . +|+|+|+. +++..+|+.||++|+
T Consensus 277 ~~~~li~a~~~~-----------~~~~-l~ivG~G~~~--~~l~~~~~~----~-~V~f~G~v~~~ev~~~~~~aDv~V~ 337 (465)
T PLN02871 277 NLDFLKRVMERL-----------PGAR-LAFVGDGPYR--EELEKMFAG----T-PTVFTGMLQGDELSQAYASGDVFVM 337 (465)
T ss_pred hHHHHHHHHHhC-----------CCcE-EEEEeCChHH--HHHHHHhcc----C-CeEEeccCCHHHHHHHHHHCCEEEE
Confidence 999999888654 5788 5699998864 788887763 3 69999965 789999999999999
Q ss_pred ccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc---CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001781 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE---GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1013)
Q Consensus 507 PS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d---G~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aAR 583 (1013)
||..| +||++++||||||+|||+++.||+.|++.+ +++|++++++|+++++++|.++++|++. +++|+++++
T Consensus 338 pS~~E--~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~ 412 (465)
T PLN02871 338 PSESE--TLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPEL---RERMGAAAR 412 (465)
T ss_pred CCccc--ccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHH
Confidence 99987 999999999999999999999999999999 9999999999999999999999999876 489999999
Q ss_pred HHHHhhcHHHHHHHHHH-HHHHHhcC
Q 001781 584 LHAKNMLALDCVTRYAR-ILENVLNF 608 (1013)
Q Consensus 584 e~ae~fs~e~~~~~y~~-Lye~lL~~ 608 (1013)
+.+++|+|+.+++++.+ +|+.++..
T Consensus 413 ~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 413 EEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 69888753
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=318.83 Aligned_cols=340 Identities=17% Similarity=0.175 Sum_probs=256.8
Q ss_pred CCCceehHHHHHHHHHHCCCEEEEEEcCCCC----ch----------------------HHHHHH----H-HHHHHHhh-
Q 001781 234 KDSRSLLLITVVKNLQKLGYVFKIYAVRSGN----SH----------------------SLWEQI----A-GQISILGQ- 281 (1013)
Q Consensus 234 ~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~----~~----------------------~~~r~i----~-~Li~lLk~- 281 (1013)
.||.+.++.++++.|.+.||+|.+++...+. .. .....+ . .+..+++.
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE 98 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4899999999999999999999999863211 00 000000 0 11133332
Q ss_pred -cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccc--c--hhhhhhHHHHHHHHHHHhccccE
Q 001781 282 -EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL--P--VYVERGFQNLLSYWKSVFSRVNV 356 (1013)
Q Consensus 282 -~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l--~--~y~~~~l~klLs~~~~~l~~AD~ 356 (1013)
.+||+||+|.+...+++.+..+. .++|+|+++|+....... . ..+.....+.+. ...++.+|.
T Consensus 99 ~~~~Diih~h~~~~~~~~~~~~~~----------~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~d~ 166 (405)
T TIGR03449 99 PGYYDLIHSHYWLSGQVGWLLRDR----------WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGE--QQLVDNADR 166 (405)
T ss_pred CCCCCeEEechHHHHHHHHHHHHh----------cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHH--HHHHHhcCe
Confidence 47999999986665555555433 358999999984211100 0 000000111111 235678999
Q ss_pred EEEcCCCchhh---hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHH
Q 001781 357 IVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVA 433 (1013)
Q Consensus 357 VI~~S~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlL 433 (1013)
+++.+...... ..+.+.+++.+|||+ +|. +.|.+. .....+.++++++++++|+++||+.+ .||++.+
T Consensus 167 vi~~s~~~~~~~~~~~~~~~~ki~vi~ng-vd~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~l~~----~K~~~~l 237 (405)
T TIGR03449 167 LIANTDEEARDLVRHYDADPDRIDVVAPG-ADL---ERFRPG-DRATERARLGLPLDTKVVAFVGRIQP----LKAPDVL 237 (405)
T ss_pred EEECCHHHHHHHHHHcCCChhhEEEECCC-cCH---HHcCCC-cHHHHHHhcCCCCCCcEEEEecCCCc----ccCHHHH
Confidence 99988764433 224556789999997 876 666543 34556788899888899999999866 7999999
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEEEEcCCC--c-ccHHHHHHHHHHcCCCCCcEEEcCC--cccHHHHHHHccEEEEcc
Q 001781 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNST--D-GYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGS 508 (1013)
Q Consensus 434 LeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~--e-~Y~e~Lkela~eLgL~dg~V~FlG~--~eDl~~lLaaADIfVlPS 508 (1013)
++|+..+.++.++ .+++| +|+|... . .+.+.++++++++++.+ +|+|+|. .+++..+|+.||++|+||
T Consensus 238 i~a~~~l~~~~~~-----~~~~l-~ivG~~~~~g~~~~~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~l~~ad~~v~ps 310 (405)
T TIGR03449 238 LRAVAELLDRDPD-----RNLRV-IVVGGPSGSGLATPDALIELAAELGIAD-RVRFLPPRPPEELVHVYRAADVVAVPS 310 (405)
T ss_pred HHHHHHHHhhCCC-----cceEE-EEEeCCCCCcchHHHHHHHHHHHcCCCc-eEEECCCCCHHHHHHHHHhCCEEEECC
Confidence 9999998665310 13884 5777522 1 23578999999999997 9999995 478999999999999999
Q ss_pred CCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHh
Q 001781 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKN 588 (1013)
Q Consensus 509 ~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~ 588 (1013)
..| +||++++|||++|+|||+++.|+.+|++.++.+|++++++|+++++++|.+++++++. +++|++++++.+++
T Consensus 311 ~~E--~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~---~~~~~~~~~~~~~~ 385 (405)
T TIGR03449 311 YNE--SFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRT---RIRMGAAAVEHAAG 385 (405)
T ss_pred CCC--CcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHh
Confidence 987 9999999999999999999999999999999999999999999999999999998875 48999999999999
Q ss_pred hcHHHHHHHHHHHHHHHh
Q 001781 589 MLALDCVTRYARILENVL 606 (1013)
Q Consensus 589 fs~e~~~~~y~~Lye~lL 606 (1013)
|+|+.++++|.++|.+++
T Consensus 386 fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 386 FSWAATADGLLSSYRDAL 403 (405)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999999876
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=310.18 Aligned_cols=344 Identities=15% Similarity=0.155 Sum_probs=264.1
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCC-ch-----------------------HHHHHHHHHHHH
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-SH-----------------------SLWEQIAGQISI 278 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~-~~-----------------------~~~r~i~~Li~l 278 (1013)
+||+++... ..||.+.++.++++.|.+.||+|.+++..... .. ........+.+.
T Consensus 1 mki~~~~~p-~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (371)
T cd04962 1 MKIGIVCYP-TYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAEV 79 (371)
T ss_pred CceeEEEEe-CCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhhccCeEEEEecccccchhhcchhHHHHHHHHHHH
Confidence 367777643 34899999999999999999999999764210 00 001223446777
Q ss_pred HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
+++.+||+||+|.+....+..+..+... ...++|+|+++|+........ .+. ... ..+..++.+|.++
T Consensus 80 i~~~~~divh~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~h~~~~~~~~~-~~~--~~~---~~~~~~~~~d~ii 147 (371)
T cd04962 80 AKRYKLDLLHVHYAVPHAVAAYLAREIL------GKKDLPVVTTLHGTDITLVGQ-DPS--FQP---ATRFSIEKSDGVT 147 (371)
T ss_pred HhcCCccEEeecccCCccHHHHHHHHhc------CcCCCcEEEEEcCCccccccc-ccc--chH---HHHHHHhhCCEEE
Confidence 8889999999986544333333222211 012689999999864321110 000 011 1223567899999
Q ss_pred EcCCCchhhhcc--CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 359 FPDYTLPMLYSV--LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 359 ~~S~~~~~ly~~--l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
+.+......... ....++.+|||+ +|. ..|.+.. ....+.+++++++.++++++||+.+ .||++.+++|
T Consensus 148 ~~s~~~~~~~~~~~~~~~~i~vi~n~-~~~---~~~~~~~-~~~~~~~~~~~~~~~~il~~g~l~~----~K~~~~li~a 218 (371)
T cd04962 148 AVSESLRQETYELFDITKEIEVIPNF-VDE---DRFRPKP-DEALKRRLGAPEGEKVLIHISNFRP----VKRIDDVIRI 218 (371)
T ss_pred EcCHHHHHHHHHhcCCcCCEEEecCC-cCH---hhcCCCc-hHHHHHhcCCCCCCeEEEEeccccc----ccCHHHHHHH
Confidence 988776544221 245689999997 776 5564432 3445677888889999999999866 7999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCcc
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
+..+.++ .+++ ++++|.++.. +.++++++++++.+ +|+|.|..+++..+|+.||++|+||..| +||
T Consensus 219 ~~~l~~~--------~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~d~~v~ps~~E--~~~ 284 (371)
T cd04962 219 FAKVRKE--------VPAR-LLLVGDGPER--SPAERLARELGLQD-DVLFLGKQDHVEELLSIADLFLLPSEKE--SFG 284 (371)
T ss_pred HHHHHhc--------CCce-EEEEcCCcCH--HHHHHHHHHcCCCc-eEEEecCcccHHHHHHhcCEEEeCCCcC--CCc
Confidence 9887543 3578 5689998865 88999999999987 8999999899999999999999999987 999
Q ss_pred HHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH-HHhhcHHHHH
Q 001781 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH-AKNMLALDCV 595 (1013)
Q Consensus 517 ivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~-ae~fs~e~~~ 595 (1013)
++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|.+++++++. +.+|++++++. .++|+++..+
T Consensus 285 ~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~fs~~~~~ 361 (371)
T cd04962 285 LAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL---WQEFSRAARNRAAERFDSERIV 361 (371)
T ss_pred cHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998876 48999999996 6789999999
Q ss_pred HHHHHHHHHH
Q 001781 596 TRYARILENV 605 (1013)
Q Consensus 596 ~~y~~Lye~l 605 (1013)
++|.++|+++
T Consensus 362 ~~~~~~y~~~ 371 (371)
T cd04962 362 PQYEALYRRL 371 (371)
T ss_pred HHHHHHHHhC
Confidence 9999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=318.11 Aligned_cols=339 Identities=13% Similarity=0.112 Sum_probs=245.4
Q ss_pred CCCCceehHHHHHHHHHHCCC--EEEEEEcCC--C----C----ch----------------------HHH----HHHHH
Q 001781 233 AKDSRSLLLITVVKNLQKLGY--VFKIYAVRS--G----N----SH----------------------SLW----EQIAG 274 (1013)
Q Consensus 233 ~~gg~~l~vl~Lak~L~e~Gy--eV~Vlt~~~--g----~----~~----------------------~~~----r~i~~ 274 (1013)
..||.+.++.++++.|.+.|+ +|.+++... + . .. ..+ .....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELADN 103 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHHHH
Confidence 348999999999999999997 999988411 0 0 00 000 11123
Q ss_pred HHHHHhhc--CccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccc--ch-----hhhh---hHHH
Q 001781 275 QISILGQE--QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL--PV-----YVER---GFQN 342 (1013)
Q Consensus 275 Li~lLk~~--kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l--~~-----y~~~---~l~k 342 (1013)
+.+.+++. +||+||+|.+.+.+++.++++. .++|+|+|.|+....... .. .... ....
T Consensus 104 l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~----------~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (439)
T TIGR02472 104 LLQHLRQQGHLPDLIHAHYADAGYVGARLSRL----------LGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISR 173 (439)
T ss_pred HHHHHHHcCCCCCEEEEcchhHHHHHHHHHHH----------hCCCEEEecccccchhhhhcccCCCChhhhhhhcchHH
Confidence 55566543 6999999987766666666544 358999999974321110 00 0000 0011
Q ss_pred HHHHHHHHhccccEEEEcCCCchh-h---hccCCCCCEEEeCCCCCCcccccccCcchh---HHH---HHHHcCCCCCcE
Q 001781 343 LLSYWKSVFSRVNVIVFPDYTLPM-L---YSVLDAGNFFVIPGSPADVWAVEAYSKSHE---KYQ---LRKENGFLKDEI 412 (1013)
Q Consensus 343 lLs~~~~~l~~AD~VI~~S~~~~~-l---y~~l~~~ki~VIPnggVDl~~~~~F~p~~~---~~~---~R~~lgi~~d~~ 412 (1013)
.+...+..++.+|.|++++..... . +.+++.+++.+|||+ +|. +.|.+... ... .+..++..++.+
T Consensus 174 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnG-vd~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
T TIGR02472 174 RIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPG-VDL---SRFYPPQSSEETSEIDNLLAPFLKDPEKP 249 (439)
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCC-cCh---hhcCCCCccccchhHHHHHHhhccccCCc
Confidence 111223457789999998754322 1 235677899999997 887 77754321 111 223455667788
Q ss_pred EEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcc---------cHHHHHHHHHHcCCCCC
Q 001781 413 VVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG---------YNDALQEVASRLGLLEH 483 (1013)
Q Consensus 413 vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~---------Y~e~Lkela~eLgL~dg 483 (1013)
+|+++||+.+ .||++.+++|++.+.... ...++++++|+++.. +.+.++.+++++++.+
T Consensus 250 ~i~~vGrl~~----~Kg~~~li~A~~~l~~~~-------~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~- 317 (439)
T TIGR02472 250 PILAISRPDR----RKNIPSLVEAYGRSPKLQ-------EMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYG- 317 (439)
T ss_pred EEEEEcCCcc----cCCHHHHHHHHHhChhhh-------hhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCc-
Confidence 9999999977 799999999998652211 122333467877642 1234566788899997
Q ss_pred cEEEcCC--cccHHHHHHHc----cEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHH
Q 001781 484 SVRHYGF--NGDVNGVLLMA----DIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557 (1013)
Q Consensus 484 ~V~FlG~--~eDl~~lLaaA----DIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~ee 557 (1013)
+|+|+|. .+++..+|+.| |+||+||.+| +||++++||||||+|||+|+.||++|+|.++.+|++++++|+++
T Consensus 318 ~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E--~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~ 395 (439)
T TIGR02472 318 KVAYPKHHRPDDVPELYRLAARSRGIFVNPALTE--PFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEA 395 (439)
T ss_pred eEEecCCCCHHHHHHHHHHHhhcCCEEecccccC--CcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHH
Confidence 9999994 57899999987 9999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHH-HhhcHHHHHHHHHHHH
Q 001781 558 LSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLALDCVTRYARIL 602 (1013)
Q Consensus 558 LAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs~e~~~~~y~~Ly 602 (1013)
++++|.++++|++. +++|++++++.+ ++|+|+.++++|.+++
T Consensus 396 la~~i~~ll~~~~~---~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 396 IASALEDALSDSSQ---WQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999876 489999999954 6899999999998876
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=321.63 Aligned_cols=353 Identities=12% Similarity=0.109 Sum_probs=261.1
Q ss_pred CCCEEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCc-----------------h-------------
Q 001781 221 RPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-----------------H------------- 266 (1013)
Q Consensus 221 r~~RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~-----------------~------------- 266 (1013)
.+++|++|..++.| ||-.-++-.|.++|++.||+|.|+....+.. .
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 81 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGGL 81 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCCc
Confidence 56889999999888 8888889999999999999998875421110 0
Q ss_pred --------H-------HH------------HHHHHH----HHHH----hhcCccEEEEcCcchHHHHHHHHHHhhhhccc
Q 001781 267 --------S-------LW------------EQIAGQ----ISIL----GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQ 311 (1013)
Q Consensus 267 --------~-------~~------------r~i~~L----i~lL----k~~kpDIIh~~~~~~~lv~~Laak~~~s~l~q 311 (1013)
. ++ ..+..+ ..++ ...+|||||+|.+++.++..+.....
T Consensus 82 ~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~------ 155 (485)
T PRK14099 82 DLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSG------ 155 (485)
T ss_pred eEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCC------
Confidence 0 00 001111 1222 34799999999999888776554211
Q ss_pred CCCCCCcEEEEEcCCccccccchh--------h----hhhHH--HHHHHHHHHhccccEEEEcCCCchhhhc----c---
Q 001781 312 EPFHSIPLVWIIQEDSLANRLPVY--------V----ERGFQ--NLLSYWKSVFSRVNVIVFPDYTLPMLYS----V--- 370 (1013)
Q Consensus 312 ep~~~IPVI~tvHg~~l~~~l~~y--------~----~~~l~--klLs~~~~~l~~AD~VI~~S~~~~~ly~----~--- 370 (1013)
..++|+|+|+|+.......... + ....+ ..+...+..+..||.|+++|...+.... +
T Consensus 156 --~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl 233 (485)
T PRK14099 156 --RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGL 233 (485)
T ss_pred --CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcCh
Confidence 1357999999996533211100 0 00000 0011234467889999999987765421 1
Q ss_pred -----CCCCCEEEeCCCCCCcccccccCcchh------------------HHHHHHHcCCCC--CcEEEEEEccCCCcCc
Q 001781 371 -----LDAGNFFVIPGSPADVWAVEAYSKSHE------------------KYQLRKENGFLK--DEIVVVVVGSSFFYNE 425 (1013)
Q Consensus 371 -----l~~~ki~VIPnggVDl~~~~~F~p~~~------------------~~~~R~~lgi~~--d~~vIL~VGRl~~yk~ 425 (1013)
....++.+|+|+ ||. +.|.|... +..+++++|++. +.++|++|||+.+
T Consensus 234 ~~~l~~~~~ki~vI~NG-ID~---~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~--- 306 (485)
T PRK14099 234 DGLLRQRADRLSGILNG-IDT---AVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSW--- 306 (485)
T ss_pred HHHHHhhCCCeEEEecC-Cch---hhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCc---
Confidence 135789999997 887 77755322 356788899974 5679999999977
Q ss_pred cccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHH-HHccEE
Q 001781 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL-LMADIV 504 (1013)
Q Consensus 426 ~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lL-aaADIf 504 (1013)
+||++.+++|+..+.+ .+++ ++|+|.|+..+.+.+++++++++ +..+.|+|+.+++..+| +.||+|
T Consensus 307 -~KG~d~Li~A~~~l~~---------~~~~-lvivG~G~~~~~~~l~~l~~~~~--~~v~~~~G~~~~l~~~~~a~aDif 373 (485)
T PRK14099 307 -QKGLDLLLEALPTLLG---------EGAQ-LALLGSGDAELEARFRAAAQAYP--GQIGVVIGYDEALAHLIQAGADAL 373 (485)
T ss_pred -cccHHHHHHHHHHHHh---------cCcE-EEEEecCCHHHHHHHHHHHHHCC--CCEEEEeCCCHHHHHHHHhcCCEE
Confidence 8999999999988753 2577 57899987655688888888764 31347999988899887 569999
Q ss_pred EEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccC---------CeEEEEcCCCHHHHHHHHHH---HHhCcccH
Q 001781 505 LYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG---------AQVIFFQKDNPEGLSRAFSL---FISNGKLS 572 (1013)
Q Consensus 505 VlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG---------~~G~Lv~p~D~eeLAeAI~~---LL~d~elR 572 (1013)
|+||.+| +||++++|||+||+|+|++++||++|+|.++ .+|+++++.|+++|+++|.+ +++|+++
T Consensus 374 v~PS~~E--~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~- 450 (485)
T PRK14099 374 LVPSRFE--PCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVA- 450 (485)
T ss_pred EECCccC--CCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHH-
Confidence 9999998 9999999999999999999999999999875 68999999999999999997 6677765
Q ss_pred HHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhcC
Q 001781 573 KFARTVASAGRLHAKNMLALDCVTRYARILENVLNF 608 (1013)
Q Consensus 573 ~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~~ 608 (1013)
+++|+++++ .++|+|++++++|.++|+++++.
T Consensus 451 --~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 451 --WRRLQRNGM--TTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred --HHHHHHHhh--hhcCChHHHHHHHHHHHHHHHhh
Confidence 488888876 47899999999999999998753
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=320.13 Aligned_cols=352 Identities=15% Similarity=0.151 Sum_probs=259.9
Q ss_pred CEEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCch--------------------------------
Q 001781 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------- 266 (1013)
Q Consensus 223 ~RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-------------------------------- 266 (1013)
++|++|+.++.| ||...++..|+++|.+.||+|.|++...+...
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v 80 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI 80 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence 478999888766 88899999999999999999999976422100
Q ss_pred ---HH------H----HH-----HH-HHHHHHhh--cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcC
Q 001781 267 ---SL------W----EQ-----IA-GQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQE 325 (1013)
Q Consensus 267 ---~~------~----r~-----i~-~Li~lLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg 325 (1013)
.. + .. +. ....+++. .+|||||+|.+++.+++.++.... ...+.++|+|+|+|+
T Consensus 81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~-----~~~~~~~~~v~TiH~ 155 (466)
T PRK00654 81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKY-----WRGYPDIKTVFTIHN 155 (466)
T ss_pred eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhh-----hccCCCCCEEEEcCC
Confidence 00 0 00 11 12233333 589999999999888777665321 011246899999999
Q ss_pred Cccccccchh------------hhhhHH--HHHHHHHHHhccccEEEEcCCCchhhhc------------cCCCCCEEEe
Q 001781 326 DSLANRLPVY------------VERGFQ--NLLSYWKSVFSRVNVIVFPDYTLPMLYS------------VLDAGNFFVI 379 (1013)
Q Consensus 326 ~~l~~~l~~y------------~~~~l~--klLs~~~~~l~~AD~VI~~S~~~~~ly~------------~l~~~ki~VI 379 (1013)
.......... ....++ ..+...+..+..||.|++.|...+.... .....++.+|
T Consensus 156 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI 235 (466)
T PRK00654 156 LAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGI 235 (466)
T ss_pred CcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEe
Confidence 6432211100 000000 0012223457789999998876644321 1235689999
Q ss_pred CCCCCCcccccccCcch------------------hHHHHHHHcCCCC-CcEEEEEEccCCCcCccccCHHHHHHHHHHH
Q 001781 380 PGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK-DEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1013)
Q Consensus 380 PnggVDl~~~~~F~p~~------------------~~~~~R~~lgi~~-d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~L 440 (1013)
||+ ||. +.|.|.. .+..++.++|+++ +.++|+++||+.+ +||++.+++|+..+
T Consensus 236 ~NG-id~---~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~----~KG~~~li~a~~~l 307 (466)
T PRK00654 236 LNG-IDY---DIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTE----QKGLDLVLEALPEL 307 (466)
T ss_pred cCC-CCc---cccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeecccc----ccChHHHHHHHHHH
Confidence 997 887 6665532 2456788999985 6789999999977 89999999999888
Q ss_pred HHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEE-EcCCccc-HHHHHHHccEEEEccCCCCCCccHH
Q 001781 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVR-HYGFNGD-VNGVLLMADIVLYGSSQVEQGFPSL 518 (1013)
Q Consensus 441 l~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~-FlG~~eD-l~~lLaaADIfVlPS~~EEEGFGiv 518 (1013)
.+ .+++ ++|+|.|+..+.+.+++++++++. +|. +.|+.++ +..+|++||++|+||.+| +||++
T Consensus 308 ~~---------~~~~-lvivG~g~~~~~~~l~~l~~~~~~---~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E--~~gl~ 372 (466)
T PRK00654 308 LE---------QGGQ-LVLLGTGDPELEEAFRALAARYPG---KVGVQIGYDEALAHRIYAGADMFLMPSRFE--PCGLT 372 (466)
T ss_pred Hh---------cCCE-EEEEecCcHHHHHHHHHHHHHCCC---cEEEEEeCCHHHHHHHHhhCCEEEeCCCCC--CchHH
Confidence 53 2678 568898876566889999998763 455 4666544 568999999999999998 99999
Q ss_pred HHHHHHhCCCEEEcCCCCchhhhccC------CeEEEEcCCCHHHHHHHHHHHHh---CcccHHHHHHHHHHHHHHHHhh
Q 001781 519 IVRAMTFGIPVITPDFPIIKEYVAEG------AQVIFFQKDNPEGLSRAFSLFIS---NGKLSKFARTVASAGRLHAKNM 589 (1013)
Q Consensus 519 VLEAMA~G~PVIASdvgGi~EiI~dG------~~G~Lv~p~D~eeLAeAI~~LL~---d~elR~~~~~Mg~aARe~ae~f 589 (1013)
++|||+||+|||++++||++|+|.++ .+|++++++|+++++++|.++++ +++. ..+|++++.+ ++|
T Consensus 373 ~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~---~~~~~~~~~~--~~f 447 (466)
T PRK00654 373 QLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPL---WRALQRQAMA--QDF 447 (466)
T ss_pred HHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHH---HHHHHHHHhc--cCC
Confidence 99999999999999999999999988 89999999999999999999987 4433 4777777653 789
Q ss_pred cHHHHHHHHHHHHHHHhc
Q 001781 590 LALDCVTRYARILENVLN 607 (1013)
Q Consensus 590 s~e~~~~~y~~Lye~lL~ 607 (1013)
+|++++++|.++|+++++
T Consensus 448 sw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 448 SWDKSAEEYLELYRRLLG 465 (466)
T ss_pred ChHHHHHHHHHHHHHHhh
Confidence 999999999999998864
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=309.47 Aligned_cols=335 Identities=17% Similarity=0.163 Sum_probs=253.0
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCc-----------------h---------HHHHHHHHH
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-----------------H---------SLWEQIAGQ 275 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~-----------------~---------~~~r~i~~L 275 (1013)
||++|.+.+.+ ||.+..+..+++.|.+.||+|.+++...+.. . .....+..+
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l 80 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLL 80 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHH
Confidence 57888887776 8889999999999999999999998632110 0 011223345
Q ss_pred HHHHhhcCccEEEEcCcchHHH--HHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhcc
Q 001781 276 ISILGQEQYSLIDWSIFDGIIA--DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1013)
Q Consensus 276 i~lLk~~kpDIIh~~~~~~~lv--~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~ 353 (1013)
.+.+++.+||+||+|.....+. ..+..+. .++|+|++.|+....... .. ...... ....++.
T Consensus 81 ~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~----------~~~~~v~t~h~~~~~~~~---~~-~~~~~~--~~~~~~~ 144 (398)
T cd03796 81 RNILIRERITIVHGHQAFSALAHEALLHART----------MGLKTVFTDHSLFGFADA---SS-IHTNKL--LRFSLAD 144 (398)
T ss_pred HHHHHhcCCCEEEECCCCchHHHHHHHHhhh----------cCCcEEEEecccccccch---hh-HHhhHH--HHHhhcc
Confidence 6777788999999997654432 2333322 458999999984211110 00 001111 1234678
Q ss_pred ccEEEEcCCCchhh---hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCH
Q 001781 354 VNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1013)
Q Consensus 354 AD~VI~~S~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~ 430 (1013)
+|.+++.+...... ...++.+++.+|||+ +|. +.|.+.... .++++++|+++||+.+ .||+
T Consensus 145 ~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ng-vd~---~~f~~~~~~--------~~~~~~~i~~~grl~~----~Kg~ 208 (398)
T cd03796 145 VDHVICVSHTSKENTVLRASLDPERVSVIPNA-VDS---SDFTPDPSK--------RDNDKITIVVISRLVY----RKGI 208 (398)
T ss_pred CCEEEEecHhHhhHHHHHhCCChhhEEEEcCc-cCH---HHcCCCccc--------CCCCceEEEEEeccch----hcCH
Confidence 99999988765432 335667889999997 776 666543221 2457789999999876 7999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCC--cccHHHHHHHccEEEEcc
Q 001781 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGS 508 (1013)
Q Consensus 431 dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~--~eDl~~lLaaADIfVlPS 508 (1013)
+.+++|+..+.++. ++++ ++|+|+++.. +.++++++++++.+ +|+|+|. .+++..+|+.||++|+||
T Consensus 209 ~~li~a~~~l~~~~-------~~~~-l~i~G~g~~~--~~l~~~~~~~~l~~-~v~~~G~~~~~~~~~~l~~ad~~v~pS 277 (398)
T cd03796 209 DLLVGIIPEICKKH-------PNVR-FIIGGDGPKR--ILLEEMREKYNLQD-RVELLGAVPHERVRDVLVQGHIFLNTS 277 (398)
T ss_pred HHHHHHHHHHHhhC-------CCEE-EEEEeCCchH--HHHHHHHHHhCCCC-eEEEeCCCCHHHHHHHHHhCCEEEeCC
Confidence 99999998886543 6899 5699998864 88999999999997 9999995 478999999999999999
Q ss_pred CCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HHH
Q 001781 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL-HAK 587 (1013)
Q Consensus 509 ~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe-~ae 587 (1013)
..| +||++++||||||+|||+++.||.+|++.++ .+++++ .|+++++++|.++++++..+ ..+++++++ ..+
T Consensus 278 ~~E--~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~---~~~~~~~~~~~~~ 350 (398)
T cd03796 278 LTE--AFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTG---KHDPWSFHNRVKK 350 (398)
T ss_pred hhh--ccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhh---hhHHHHHHHHHHh
Confidence 987 9999999999999999999999999999876 344444 58999999999999986642 456677777 667
Q ss_pred hhcHHHHHHHHHHHHHHHhcC
Q 001781 588 NMLALDCVTRYARILENVLNF 608 (1013)
Q Consensus 588 ~fs~e~~~~~y~~Lye~lL~~ 608 (1013)
+|+|+.++++|.++|+.++..
T Consensus 351 ~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 351 MYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred hCCHHHHHHHHHHHHHHHhcC
Confidence 899999999999999998864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=333.96 Aligned_cols=294 Identities=9% Similarity=0.042 Sum_probs=226.9
Q ss_pred CccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccccc--c-----h-hh---hhhHHHHHHHHHHHh
Q 001781 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL--P-----V-YV---ERGFQNLLSYWKSVF 351 (1013)
Q Consensus 283 kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l--~-----~-y~---~~~l~klLs~~~~~l 351 (1013)
.||+||+|.+.+..++.+++... ++|+|.|.|...-.+.. . . .. .......+..-...+
T Consensus 310 ~pDvIHaHyw~sG~aa~~L~~~l----------gVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l 379 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSAALLSGAL----------NVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSL 379 (1050)
T ss_pred CCCEEEECcchHHHHHHHHHHhh----------CCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHH
Confidence 49999999999888888777654 59999999974211110 0 0 00 001112222334467
Q ss_pred ccccEEEEcCCCchhh----hccCC---------------------CCCEEEeCCCCCCcccccccCcchhH--------
Q 001781 352 SRVNVIVFPDYTLPML----YSVLD---------------------AGNFFVIPGSPADVWAVEAYSKSHEK-------- 398 (1013)
Q Consensus 352 ~~AD~VI~~S~~~~~l----y~~l~---------------------~~ki~VIPnggVDl~~~~~F~p~~~~-------- 398 (1013)
..||.||+++..+... |..++ ..++.|||+| ||+ +.|.|....
T Consensus 380 ~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpG-VD~---~~F~P~~~~~~~~~~~~ 455 (1050)
T TIGR02468 380 DASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPG-MEF---SHIVPHDGDMDGETEGN 455 (1050)
T ss_pred HhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCC-CcH---HHccCCCccccchhccc
Confidence 8899999998777653 32222 2389999997 887 888653211
Q ss_pred -----------HHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc--
Q 001781 399 -----------YQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD-- 465 (1013)
Q Consensus 399 -----------~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e-- 465 (1013)
......+...+++++|+++||+.+ .||++.+|+|+..+.... ..++++ + |+|.++.
T Consensus 456 ~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p----~KGi~~LIeAf~~L~~l~-----~~~nL~-L-IiG~gdd~d 524 (1050)
T TIGR02468 456 EEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDP----KKNITTLVKAFGECRPLR-----ELANLT-L-IMGNRDDID 524 (1050)
T ss_pred ccccccccchhhHHHHhhcccCCCcEEEEEcCCcc----ccCHHHHHHHHHHhHhhc-----cCCCEE-E-EEecCchhh
Confidence 001123445677889999999977 899999999999885431 113555 3 5676542
Q ss_pred -------ccHHHHHHHHHHcCCCCCcEEEcCC--cccHHHHHHHc----cEEEEccCCCCCCccHHHHHHHHhCCCEEEc
Q 001781 466 -------GYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMA----DIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1013)
Q Consensus 466 -------~Y~e~Lkela~eLgL~dg~V~FlG~--~eDl~~lLaaA----DIfVlPS~~EEEGFGivVLEAMA~G~PVIAS 532 (1013)
.+...++++++++++.+ +|.|+|+ .+++..+|+.| |+||+||.+| +||++++||||||+|||+|
T Consensus 525 ~l~~~~~~~l~~L~~li~~lgL~g-~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~E--gFGLvlLEAMAcGlPVVAS 601 (1050)
T TIGR02468 525 EMSSGSSSVLTSVLKLIDKYDLYG-QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPMVAT 601 (1050)
T ss_pred hhhccchHHHHHHHHHHHHhCCCC-eEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccC--CCCHHHHHHHHhCCCEEEe
Confidence 12356788999999997 9999994 57899999988 6999999998 9999999999999999999
Q ss_pred CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 533 DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 533 dvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
++||+.|+|.++.+|+++++.|+++|+++|.+++++++++ ++|+++|++.+++|+|+.++++|.++|..++.
T Consensus 602 dvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr---~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 602 KNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLW---AECRQNGLKNIHLFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred CCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999874 89999999999999999999999999998764
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=325.65 Aligned_cols=347 Identities=14% Similarity=0.075 Sum_probs=257.3
Q ss_pred CCCCCC-EEEEEecccCCCCceehHHHHHHHHHHCCC--------------EEEEEEc--CCCC--ch------------
Q 001781 218 FGVRPP-RIGLILGNMAKDSRSLLLITVVKNLQKLGY--------------VFKIYAV--RSGN--SH------------ 266 (1013)
Q Consensus 218 ~g~r~~-RIalI~g~l~~gg~~l~vl~Lak~L~e~Gy--------------eV~Vlt~--~~g~--~~------------ 266 (1013)
-+.++. ||++|++++..||.+.++++++.+|...++ .|.+++. ..+. +.
T Consensus 276 ~~~~~~~rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~ 355 (694)
T PRK15179 276 GPESFVGPVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSV 355 (694)
T ss_pred CCCCCcceEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEE
Confidence 356677 999999999999999999999999999854 4555422 1110 00
Q ss_pred ----------------------------HHHHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCc
Q 001781 267 ----------------------------SLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIP 318 (1013)
Q Consensus 267 ----------------------------~~~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IP 318 (1013)
..+..+..+.+++++.+|||||+|.....+++.++++.. ++|
T Consensus 356 l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~----------gvP 425 (694)
T PRK15179 356 YSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLA----------GVP 425 (694)
T ss_pred eccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHc----------CCC
Confidence 011223557788999999999999988888777777543 478
Q ss_pred EEE-EEcCCccccccchhhhhhHHHHHHHHHHHhcccc--EEEEcCCCchhh---hccCCCCCEEEeCCCCCCccccccc
Q 001781 319 LVW-IIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN--VIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAY 392 (1013)
Q Consensus 319 VI~-tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD--~VI~~S~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F 392 (1013)
+|+ +.|+....... . ++..........+..++ .+|+.+...... ..+++.+++.||||+ ||. ..|
T Consensus 426 vIv~t~h~~~~~~~~----~-~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NG-Vd~---~~f 496 (694)
T PRK15179 426 RIVLSVRTMPPVDRP----D-RYRVEYDIIYSELLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNG-LAP---LKS 496 (694)
T ss_pred EEEEEeCCCccccch----h-HHHHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCC-cCH---Hhc
Confidence 876 44653211110 0 00000111111122233 444444433322 235677899999997 876 666
Q ss_pred CcchhHHHHHH--HcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHH
Q 001781 393 SKSHEKYQLRK--ENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDA 470 (1013)
Q Consensus 393 ~p~~~~~~~R~--~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~ 470 (1013)
.+.+.....+. ....+.+.++|+++||+.+ +||++.+++|+..+.++. |+++ ++|+|+|+.. +.
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~----~KG~~~LI~A~a~l~~~~-------p~~~-LvIvG~G~~~--~~ 562 (694)
T PRK15179 497 VQDDACTAMMAQFDARTSDARFTVGTVMRVDD----NKRPFLWVEAAQRFAASH-------PKVR-FIMVGGGPLL--ES 562 (694)
T ss_pred CCCchhhHHHHhhccccCCCCeEEEEEEeCCc----cCCHHHHHHHHHHHHHHC-------cCeE-EEEEccCcch--HH
Confidence 54332222122 2234556789999999876 899999999999987654 6899 5799998865 89
Q ss_pred HHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEE
Q 001781 471 LQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFF 550 (1013)
Q Consensus 471 Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv 550 (1013)
++++++++++.+ +|+|+|..+++..+|+.||++|+||.+| +||++++|||+||+|||+|++||++|+|.++.+|+++
T Consensus 563 L~~l~~~lgL~~-~V~flG~~~dv~~ll~aaDv~VlpS~~E--gfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv 639 (694)
T PRK15179 563 VREFAQRLGMGE-RILFTGLSRRVGYWLTQFNAFLLLSRFE--GLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL 639 (694)
T ss_pred HHHHHHHcCCCC-cEEEcCCcchHHHHHHhcCEEEeccccc--cchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe
Confidence 999999999997 9999999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred cCCCH--HHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-HhhcHHHHHHHHHHHHH
Q 001781 551 QKDNP--EGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLALDCVTRYARILE 603 (1013)
Q Consensus 551 ~p~D~--eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs~e~~~~~y~~Lye 603 (1013)
+++|+ ++++++|.+++.+... ...+++++++.+ ++|+++.++++|.++|+
T Consensus 640 ~~~d~~~~~La~aL~~ll~~l~~---~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 640 PADTVTAPDVAEALARIHDMCAA---DPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred CCCCCChHHHHHHHHHHHhChhc---cHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 98774 6899999999887654 267888999976 58999999999999995
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=330.05 Aligned_cols=346 Identities=14% Similarity=0.068 Sum_probs=263.0
Q ss_pred CCCEEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCch------------------------------
Q 001781 221 RPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH------------------------------ 266 (1013)
Q Consensus 221 r~~RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~------------------------------ 266 (1013)
.+++|++|...+.| ||...++..|.++|++.||+|.|++.......
T Consensus 586 ~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV 665 (1036)
T PLN02316 586 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEGL 665 (1036)
T ss_pred CCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECCc
Confidence 45899999999887 88899999999999999999999977432100
Q ss_pred ---------HHH------------HHHHH----HHHHHhh--cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcE
Q 001781 267 ---------SLW------------EQIAG----QISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPL 319 (1013)
Q Consensus 267 ---------~~~------------r~i~~----Li~lLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPV 319 (1013)
.++ ..+.. ...+++. .+|||||+|.++..++..++..... ...+.++|+
T Consensus 666 ~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~----~~~~~~~p~ 741 (1036)
T PLN02316 666 SVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYA----HYGLSKARV 741 (1036)
T ss_pred EEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhh----hhccCCCCE
Confidence 000 00111 2233332 5899999999988777766654321 011256899
Q ss_pred EEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhh---ccCC--CCCEEEeCCCCCCcccccccCc
Q 001781 320 VWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY---SVLD--AGNFFVIPGSPADVWAVEAYSK 394 (1013)
Q Consensus 320 I~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly---~~l~--~~ki~VIPnggVDl~~~~~F~p 394 (1013)
|+|+|+..... .. ....+..+|.|+++|..++... ..+. ..++.+|||| ||. +.|.|
T Consensus 742 V~TiHnl~~~~-----------n~---lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NG-ID~---~~w~P 803 (1036)
T PLN02316 742 VFTIHNLEFGA-----------NH---IGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNG-IDP---DIWDP 803 (1036)
T ss_pred EEEeCCcccch-----------hH---HHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECC-ccc---cccCC
Confidence 99999853211 01 1234567999999998876442 2222 3789999997 887 55543
Q ss_pred c-------------------hhHHHHHHHcCCCC-CcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCe
Q 001781 395 S-------------------HEKYQLRKENGFLK-DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSF 454 (1013)
Q Consensus 395 ~-------------------~~~~~~R~~lgi~~-d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdi 454 (1013)
. ..+..++.++|++. +.++|++|||+.+ +||++++++|+..+++ .++
T Consensus 804 ~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~----qKGvdlLi~Al~~ll~---------~~~ 870 (1036)
T PLN02316 804 YNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTH----QKGIHLIKHAIWRTLE---------RNG 870 (1036)
T ss_pred cccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEecccc----ccCHHHHHHHHHHHhh---------cCc
Confidence 2 12455788999984 6789999999977 8999999999988764 267
Q ss_pred EEEEEEcCCCcc-cHHHHHHHHHHcCC--CCCcEEEcCCcccH--HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCE
Q 001781 455 KFVFLCGNSTDG-YNDALQEVASRLGL--LEHSVRHYGFNGDV--NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV 529 (1013)
Q Consensus 455 kFLVIvG~G~e~-Y~e~Lkela~eLgL--~dg~V~FlG~~eDl--~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PV 529 (1013)
+ ++|+|.|++. +.+.++++++++++ ++ +|.|.|..++. ..+|+.||+||+||.+| +||++++|||+||+||
T Consensus 871 q-lVIvG~Gpd~~~e~~l~~La~~Lg~~~~~-rV~f~g~~de~lah~iyaaADiflmPS~~E--P~GLvqLEAMa~Gtpp 946 (1036)
T PLN02316 871 Q-VVLLGSAPDPRIQNDFVNLANQLHSSHHD-RARLCLTYDEPLSHLIYAGADFILVPSIFE--PCGLTQLTAMRYGSIP 946 (1036)
T ss_pred E-EEEEeCCCCHHHHHHHHHHHHHhCccCCC-eEEEEecCCHHHHHHHHHhCcEEEeCCccc--CccHHHHHHHHcCCCe
Confidence 8 4689988643 45788999999876 55 89998855443 37999999999999998 9999999999999999
Q ss_pred EEcCCCCchhhhccC-------------CeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH-HHhhcHHHHH
Q 001781 530 ITPDFPIIKEYVAEG-------------AQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH-AKNMLALDCV 595 (1013)
Q Consensus 530 IASdvgGi~EiI~dG-------------~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~-ae~fs~e~~~ 595 (1013)
|++++||++|+|.|+ .+||+|++.|+++++.+|.+++.+... ....|++.+++. .++|+|+.++
T Consensus 947 Vvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~--~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 947 VVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYD--GRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred EEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHHhhCCHHHHH
Confidence 999999999999884 699999999999999999999987421 136678888884 5679999999
Q ss_pred HHHHHHHHHHhc
Q 001781 596 TRYARILENVLN 607 (1013)
Q Consensus 596 ~~y~~Lye~lL~ 607 (1013)
.+|.++|+.+.+
T Consensus 1025 ~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 1025 LDYMELYHSARK 1036 (1036)
T ss_pred HHHHHHHHHHhC
Confidence 999999998764
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=294.09 Aligned_cols=336 Identities=17% Similarity=0.237 Sum_probs=260.2
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch-------------------HHHHHHHHHHHHHhhcCc
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------SLWEQIAGQISILGQEQY 284 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-------------------~~~r~i~~Li~lLk~~kp 284 (1013)
+|++++..++.||.+.++.++++.|.+.||+|.+++...+... ..+..+..+.+++++.+|
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 80 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLNMSKNPLSFLLALWKLRKILRQFKP 80 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEecccccchhhHHHHHHHHHHHHhcCC
Confidence 4788888899999999999999999999999999976432211 112333446677888999
Q ss_pred cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCc
Q 001781 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1013)
Q Consensus 285 DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~ 364 (1013)
|+||++.....++..+..+.. ..+|+|.+.|+...... ....+.++. ...++.+++.+...
T Consensus 81 div~~~~~~~~~~~~l~~~~~---------~~~~~v~~~h~~~~~~~--------~~~~~~~~~--~~~~~~~~~~s~~~ 141 (360)
T cd04951 81 DVVHAHMFHANIFARLLRLFL---------PSPPLICTAHSKNEGGR--------LRMLAYRLT--DFLSDLTTNVSKEA 141 (360)
T ss_pred CEEEEcccchHHHHHHHHhhC---------CCCcEEEEeeccCchhH--------HHHHHHHHH--hhccCceEEEcHHH
Confidence 999998877766665554332 46789999998642111 111122222 22355556555444
Q ss_pred hhhh---ccCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHH
Q 001781 365 PMLY---SVLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1013)
Q Consensus 365 ~~ly---~~l~~~ki~VIPnggVDl~~~~~F~p~-~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~L 440 (1013)
...+ ...+.+++.+|||+ +|. ..|.+. .....++..+++++++++++++||+.+ .||++.+++++..+
T Consensus 142 ~~~~~~~~~~~~~~~~~i~ng-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~----~kg~~~li~a~~~l 213 (360)
T cd04951 142 LDYFIASKAFNANKSFVVYNG-IDT---DRFRKDPARRLKIRNALGVKNDTFVILAVGRLVE----AKDYPNLLKAFAKL 213 (360)
T ss_pred HHHHHhccCCCcccEEEEccc-cch---hhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCch----hcCcHHHHHHHHHH
Confidence 3332 23566789999996 776 666443 334567888999888999999999866 79999999999988
Q ss_pred HHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHH
Q 001781 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIV 520 (1013)
Q Consensus 441 l~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVL 520 (1013)
.++. ++++ ++|+|.|+.. +.++++++++++.+ +|.|+|+.+++..+|+.||++++||..| +||++++
T Consensus 214 ~~~~-------~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~s~~e--~~~~~~~ 280 (360)
T cd04951 214 LSDY-------LDIK-LLIAGDGPLR--ATLERLIKALGLSN-RVKLLGLRDDIAAYYNAADLFVLSSAWE--GFGLVVA 280 (360)
T ss_pred HhhC-------CCeE-EEEEcCCCcH--HHHHHHHHhcCCCC-cEEEecccccHHHHHHhhceEEeccccc--CCChHHH
Confidence 6553 6889 4689998865 88999999999987 9999999999999999999999999998 9999999
Q ss_pred HHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 001781 521 RAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYAR 600 (1013)
Q Consensus 521 EAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~ 600 (1013)
|||++|+|||+++.|+..|++.+ +|++++++|+++++++|.++++++.. .+..++++.....++|+|+.++++|.+
T Consensus 281 Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~ 356 (360)
T cd04951 281 EAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGE--ERDIIGARRERIVKKFSINSIVQQWLT 356 (360)
T ss_pred HHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999986 79999999999999999999965543 246677663337788999999999999
Q ss_pred HHH
Q 001781 601 ILE 603 (1013)
Q Consensus 601 Lye 603 (1013)
+|+
T Consensus 357 ~y~ 359 (360)
T cd04951 357 LYT 359 (360)
T ss_pred Hhh
Confidence 986
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-31 Score=287.54 Aligned_cols=340 Identities=20% Similarity=0.298 Sum_probs=266.8
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCC-ch-------------------HHHHHHHHHHHHHhhcC
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-SH-------------------SLWEQIAGQISILGQEQ 283 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~-~~-------------------~~~r~i~~Li~lLk~~k 283 (1013)
||+++++.+..||.+.++..+++.|.+.|++|.+++..... .. ..+..+..+.+.+++.+
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPGRPDPGALLRLYKLIRRLR 80 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccccccHHHHHHHHHHHHhhC
Confidence 58999999999999999999999999999999999764321 10 11123344677888899
Q ss_pred ccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCC
Q 001781 284 YSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYT 363 (1013)
Q Consensus 284 pDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~ 363 (1013)
||+||.+.+...+...+..+.. .++|+|+++|+....... ........+. ....+.++.+++.+..
T Consensus 81 ~div~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~i~~s~~ 146 (365)
T cd03807 81 PDVVHTWMYHADLYGGLAARLA---------GVPPVIWGIRHSDLDLGK---KSTRLVARLR--RLLSSFIPLIVANSAA 146 (365)
T ss_pred CCEEEeccccccHHHHHHHHhc---------CCCcEEEEecCCcccccc---hhHhHHHHHH--HHhccccCeEEeccHH
Confidence 9999998777666555555432 357899999996543210 0111111111 2234567887887776
Q ss_pred chhhhc--cCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHH
Q 001781 364 LPMLYS--VLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1013)
Q Consensus 364 ~~~ly~--~l~~~ki~VIPnggVDl~~~~~F~p~-~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~L 440 (1013)
....+. +++..++.++||+ +|. ..+.+. ......+++++++++.++|+++||+.+ .||++.+++|+..+
T Consensus 147 ~~~~~~~~~~~~~~~~vi~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~----~K~~~~li~a~~~l 218 (365)
T cd03807 147 AAEYHQAIGYPPKKIVVIPNG-VDT---ERFSPDLDARARLREELGLPEDTFLIGIVARLHP----QKDHATLLRAAALL 218 (365)
T ss_pred HHHHHHHcCCChhheeEeCCC-cCH---HhcCCcccchHHHHHhcCCCCCCeEEEEecccch----hcCHHHHHHHHHHH
Confidence 655532 4667789999996 776 555432 234556678899989999999999866 79999999999988
Q ss_pred HHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHH-HcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHH
Q 001781 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS-RLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLI 519 (1013)
Q Consensus 441 l~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~-eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivV 519 (1013)
.++. ++++ ++++|.++.. ..++.... ++++.+ +|.+.|..+++..+|+.||++++||..| ++|+++
T Consensus 219 ~~~~-------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~ps~~e--~~~~~~ 285 (365)
T cd03807 219 LKKF-------PNAR-LLLVGDGPDR--ANLELLALKELGLED-KVILLGERSDVPALLNALDVFVLSSLSE--GFPNVL 285 (365)
T ss_pred HHhC-------CCeE-EEEecCCcch--hHHHHHHHHhcCCCc-eEEEccccccHHHHHHhCCEEEeCCccc--cCCcHH
Confidence 6653 6899 5689998865 66777776 889887 9999998899999999999999999997 999999
Q ss_pred HHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-HhhcHHHHHHHH
Q 001781 520 VRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLALDCVTRY 598 (1013)
Q Consensus 520 LEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs~e~~~~~y 598 (1013)
+|||+||+|||+++.++..|++.+ +|++++++|+++++++|.+++++++. +.++++++++.+ ++|+|++.+++|
T Consensus 286 ~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~~~~~ 360 (365)
T cd03807 286 LEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPAL---RQALGEAARERIEENFSIEAMVEAY 360 (365)
T ss_pred HHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHH---HHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999987 89999999999999999999999865 488999999966 568999999999
Q ss_pred HHHHH
Q 001781 599 ARILE 603 (1013)
Q Consensus 599 ~~Lye 603 (1013)
.++|+
T Consensus 361 ~~~y~ 365 (365)
T cd03807 361 EELYR 365 (365)
T ss_pred HHHhC
Confidence 99884
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=308.52 Aligned_cols=337 Identities=15% Similarity=0.157 Sum_probs=253.0
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCC---ch---H---H---------------HHHH------
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN---SH---S---L---------------WEQI------ 272 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~---~~---~---~---------------~r~i------ 272 (1013)
++|+++++.+. ...+.++.+-..+|+++|++|.+++..... .+ . . ....
T Consensus 1 m~ia~~~~~~P-~~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (406)
T PRK15427 1 MKVGFFLLKFP-LSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRASQT 79 (406)
T ss_pred CeEEEEeccCC-ccchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhhhH
Confidence 37889988876 455778888899999999999999874321 00 0 0 0000
Q ss_pred ----------------------------HHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEc
Q 001781 273 ----------------------------AGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQ 324 (1013)
Q Consensus 273 ----------------------------~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvH 324 (1013)
..+...++..++|+||+|............... ....|+++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~--------~~~~~~~~t~H 151 (406)
T PRK15427 80 LRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELG--------VLRGKIATIFH 151 (406)
T ss_pred hhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhC--------CCCCCeEEEEc
Confidence 001233456789999998766554444333211 02356788999
Q ss_pred CCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCcccccccCcchhHHHHH
Q 001781 325 EDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLR 402 (1013)
Q Consensus 325 g~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R 402 (1013)
+......... ......+...++++|.+++.+....... .+.+.+++.+|||+ +|. +.|.+....
T Consensus 152 g~d~~~~~~~------~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~nG-vd~---~~f~~~~~~---- 217 (406)
T PRK15427 152 GIDISSREVL------NHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSRMG-VDM---TRFSPRPVK---- 217 (406)
T ss_pred ccccccchhh------hhhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcCCC-CCH---HHcCCCccc----
Confidence 8654322100 0111123445788999999887655442 24566789999997 887 666442211
Q ss_pred HHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCC
Q 001781 403 KENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE 482 (1013)
Q Consensus 403 ~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~d 482 (1013)
...+.+.|+++||+.+ .||++.+++|++.+.++. ++++ ++|+|+|+.. +.++++++++++.+
T Consensus 218 ----~~~~~~~il~vGrl~~----~Kg~~~ll~a~~~l~~~~-------~~~~-l~ivG~G~~~--~~l~~~~~~~~l~~ 279 (406)
T PRK15427 218 ----APATPLEIISVARLTE----KKGLHVAIEACRQLKEQG-------VAFR-YRILGIGPWE--RRLRTLIEQYQLED 279 (406)
T ss_pred ----cCCCCeEEEEEeCcch----hcCHHHHHHHHHHHHhhC-------CCEE-EEEEECchhH--HHHHHHHHHcCCCC
Confidence 1235678999999976 799999999999886542 6899 5699999865 89999999999997
Q ss_pred CcEEEcCCc--ccHHHHHHHccEEEEccCCC----CCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHH
Q 001781 483 HSVRHYGFN--GDVNGVLLMADIVLYGSSQV----EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1013)
Q Consensus 483 g~V~FlG~~--eDl~~lLaaADIfVlPS~~E----EEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~e 556 (1013)
+|+|+|.. +++..+|+.||++|+||..+ -||||++++||||||+|||+|+.||++|+|.++.+|++++++|++
T Consensus 280 -~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~ 358 (406)
T PRK15427 280 -VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQ 358 (406)
T ss_pred -eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHH
Confidence 99999954 78999999999999999751 129999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CcccHHHHHHHHHHHHHHH-HhhcHHHHHHHHHHHHHH
Q 001781 557 GLSRAFSLFIS-NGKLSKFARTVASAGRLHA-KNMLALDCVTRYARILEN 604 (1013)
Q Consensus 557 eLAeAI~~LL~-d~elR~~~~~Mg~aARe~a-e~fs~e~~~~~y~~Lye~ 604 (1013)
+++++|.++++ |+++ +++|+++|++.+ ++|.++..++++.++|++
T Consensus 359 ~la~ai~~l~~~d~~~---~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 359 ALAQRLAAFSQLDTDE---LAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999 8875 489999999965 678889999999999876
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=312.72 Aligned_cols=348 Identities=16% Similarity=0.153 Sum_probs=258.4
Q ss_pred CEEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCchH-------------------------------
Q 001781 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS------------------------------- 267 (1013)
Q Consensus 223 ~RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~------------------------------- 267 (1013)
++|++|+.++.+ ||...++-.|.++|+++||+|.|++...+....
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 478999988666 888999999999999999999999763321000
Q ss_pred ------------------HH---------HH--HH-HHHHHHh--hcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCC
Q 001781 268 ------------------LW---------EQ--IA-GQISILG--QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFH 315 (1013)
Q Consensus 268 ------------------~~---------r~--i~-~Li~lLk--~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~ 315 (1013)
++ +. +. ....+++ ..+|||||+|.+++.++..++..... ..
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~-------~~ 153 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYR-------PN 153 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhcc-------CC
Confidence 00 00 00 0223333 26899999999988887776654321 01
Q ss_pred CCcEEEEEcCCccccccchhhh------------hhH--HHHHHHHHHHhccccEEEEcCCCchhhhc------c-----
Q 001781 316 SIPLVWIIQEDSLANRLPVYVE------------RGF--QNLLSYWKSVFSRVNVIVFPDYTLPMLYS------V----- 370 (1013)
Q Consensus 316 ~IPVI~tvHg~~l~~~l~~y~~------------~~l--~klLs~~~~~l~~AD~VI~~S~~~~~ly~------~----- 370 (1013)
++|+|+|+|+............ ..+ ...+...+..+..||.+++.|........ +
T Consensus 154 ~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l 233 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVL 233 (473)
T ss_pred CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHH
Confidence 4899999998643211100000 000 00122234467889999999876544321 1
Q ss_pred -CCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCC--CcEEEEEEccCCCcCccccC
Q 001781 371 -LDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK--DEIVVVVVGSSFFYNELSWD 429 (1013)
Q Consensus 371 -l~~~ki~VIPnggVDl~~~~~F~p~~------------------~~~~~R~~lgi~~--d~~vIL~VGRl~~yk~~~Kg 429 (1013)
....++.+|+|+ +|. +.|.|.. .+..+++++|++. +.++|+++||+.+ +||
T Consensus 234 ~~~~~ki~~I~NG-id~---~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~----~Kg 305 (473)
T TIGR02095 234 KARSGKLRGILNG-IDT---EVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQ----QKG 305 (473)
T ss_pred HhcCCCeEEEeCC-CCc---cccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCcc----ccC
Confidence 135689999997 887 6665431 2456788999986 7889999999977 899
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC-C-cccHHHHHHHccEEEEc
Q 001781 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-F-NGDVNGVLLMADIVLYG 507 (1013)
Q Consensus 430 ~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG-~-~eDl~~lLaaADIfVlP 507 (1013)
++.+++|+..+.+. +++ ++|+|.|+..+.+.+++++++++ . +|.+.+ . .+++..+|++||++|+|
T Consensus 306 ~~~li~a~~~l~~~---------~~~-lvi~G~g~~~~~~~l~~~~~~~~--~-~v~~~~~~~~~~~~~~~~~aDv~l~p 372 (473)
T TIGR02095 306 VDLLLAALPELLEL---------GGQ-LVVLGTGDPELEEALRELAERYP--G-NVRVIIGYDEALAHLIYAGADFILMP 372 (473)
T ss_pred hHHHHHHHHHHHHc---------CcE-EEEECCCCHHHHHHHHHHHHHCC--C-cEEEEEcCCHHHHHHHHHhCCEEEeC
Confidence 99999999988542 478 56999987555688888888654 3 677766 3 34467899999999999
Q ss_pred cCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccC------CeEEEEcCCCHHHHHHHHHHHHh----CcccHHHHHH
Q 001781 508 SSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEG------AQVIFFQKDNPEGLSRAFSLFIS----NGKLSKFART 577 (1013)
Q Consensus 508 S~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG------~~G~Lv~p~D~eeLAeAI~~LL~----d~elR~~~~~ 577 (1013)
|.+| +||++++|||+||+|||++++||+.|+|.++ .+|+++++.|+++++++|.+++. +++. .++
T Consensus 373 S~~E--~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~---~~~ 447 (473)
T TIGR02095 373 SRFE--PCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSL---WEA 447 (473)
T ss_pred CCcC--CcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHH---HHH
Confidence 9998 9999999999999999999999999999998 89999999999999999999988 6665 478
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHHH
Q 001781 578 VASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 578 Mg~aARe~ae~fs~e~~~~~y~~Lye~l 605 (1013)
|++++. .++|+|++++++|.++|+++
T Consensus 448 ~~~~~~--~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 448 LQKNAM--SQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHh--ccCCCcHHHHHHHHHHHHhC
Confidence 888775 36899999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=321.95 Aligned_cols=360 Identities=13% Similarity=0.109 Sum_probs=267.7
Q ss_pred CCCCEEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCch-----------------------------
Q 001781 220 VRPPRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------------------- 266 (1013)
Q Consensus 220 ~r~~RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~----------------------------- 266 (1013)
..+++|++|...+.| ||-.-++-.|.++|++.||+|.|+....+...
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 346899999999888 88899999999999999999999865322100
Q ss_pred ---------------H--HH---------HH---HHH----HHHHHhh--cCccEEEEcCcchHHHHHHHHHHhhhhccc
Q 001781 267 ---------------S--LW---------EQ---IAG----QISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQ 311 (1013)
Q Consensus 267 ---------------~--~~---------r~---i~~----Li~lLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~q 311 (1013)
. ++ .. +.. ...++.. .+|||||+|.++..++..+..... ..
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y----~~ 634 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLY----AP 634 (977)
T ss_pred EEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHH----hh
Confidence 0 00 00 000 2234433 699999999999888644332211 11
Q ss_pred CCCCCCcEEEEEcCCccccccchh-------h------hhhH----HHHHHHHHHHhccccEEEEcCCCchhhh------
Q 001781 312 EPFHSIPLVWIIQEDSLANRLPVY-------V------ERGF----QNLLSYWKSVFSRVNVIVFPDYTLPMLY------ 368 (1013)
Q Consensus 312 ep~~~IPVI~tvHg~~l~~~l~~y-------~------~~~l----~klLs~~~~~l~~AD~VI~~S~~~~~ly------ 368 (1013)
..+.++|+|+|+|+..+....... + ..++ ...+...+..+..||.|+++|+.++...
T Consensus 635 ~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~ 714 (977)
T PLN02939 635 KGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGR 714 (977)
T ss_pred ccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhcc
Confidence 123568999999996533221100 0 0011 0123333445667999999887765441
Q ss_pred -----ccCCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCC---CcEEEEEEccCCC
Q 001781 369 -----SVLDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK---DEIVVVVVGSSFF 422 (1013)
Q Consensus 369 -----~~l~~~ki~VIPnggVDl~~~~~F~p~~------------------~~~~~R~~lgi~~---d~~vIL~VGRl~~ 422 (1013)
......++.+|+|| ||. +.|.|.. .+..+++++|++. +.++|++|||+.+
T Consensus 715 GL~~~L~~~~~Kl~gIlNG-ID~---e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~ 790 (977)
T PLN02939 715 GLQDTLKFHSKKFVGILNG-IDT---DTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVP 790 (977)
T ss_pred chHHHhccccCCceEEecc-eeh---hhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCc
Confidence 12346789999997 887 7776543 2567889999984 4689999999977
Q ss_pred cCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc-ccHHHHHHHHHHcCCCCCcEEEcCCccc--HHHHHH
Q 001781 423 YNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD-GYNDALQEVASRLGLLEHSVRHYGFNGD--VNGVLL 499 (1013)
Q Consensus 423 yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e-~Y~e~Lkela~eLgL~dg~V~FlG~~eD--l~~lLa 499 (1013)
+||++++++|+..+.. ++++ ++|+|+|+. .+.+.++++++++++.+ +|.|+|..++ ...+|+
T Consensus 791 ----QKGiDlLleA~~~Ll~---------~dvq-LVIvGdGp~~~~e~eL~~La~~l~l~d-rV~FlG~~de~lah~IYA 855 (977)
T PLN02939 791 ----QKGVHLIRHAIYKTAE---------LGGQ-FVLLGSSPVPHIQREFEGIADQFQSNN-NIRLILKYDEALSHSIYA 855 (977)
T ss_pred ----ccChHHHHHHHHHHhh---------cCCE-EEEEeCCCcHHHHHHHHHHHHHcCCCC-eEEEEeccCHHHHHHHHH
Confidence 8999999999987753 2678 568999864 34578899999999987 9999996654 357999
Q ss_pred HccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc---------CCeEEEEcCCCHHHHHHHHHHHHh---
Q 001781 500 MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE---------GAQVIFFQKDNPEGLSRAFSLFIS--- 567 (1013)
Q Consensus 500 aADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d---------G~~G~Lv~p~D~eeLAeAI~~LL~--- 567 (1013)
.||+||+||.+| +||++++|||+||+|||++++||+.|+|.+ +.+|+++++.|+++++++|.++++
T Consensus 856 aADIFLmPSr~E--PfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~ 933 (977)
T PLN02939 856 ASDMFIIPSMFE--PCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYK 933 (977)
T ss_pred hCCEEEECCCcc--CCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhc
Confidence 999999999998 999999999999999999999999999876 579999999999999999999876
Q ss_pred -CcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhcCC
Q 001781 568 -NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 609 (1013)
Q Consensus 568 -d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~~p 609 (1013)
+++. +.+|++++ ..++|+|+.++++|.++|+.++...
T Consensus 934 ~dpe~---~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll~~~ 971 (977)
T PLN02939 934 RKPEV---WKQLVQKD--MNIDFSWDSSASQYEELYQRAVARA 971 (977)
T ss_pred cCHHH---HHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 5655 37787755 3578999999999999999988643
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-31 Score=300.83 Aligned_cols=347 Identities=14% Similarity=0.118 Sum_probs=256.1
Q ss_pred CEEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCC--------------c-------------------hH
Q 001781 223 PRIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGN--------------S-------------------HS 267 (1013)
Q Consensus 223 ~RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~--------------~-------------------~~ 267 (1013)
+||+++...+.+ +|.+..+.++++.|.+.||+|++++..... . ..
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~ 80 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPS 80 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCcc
Confidence 478888877666 788889999999999999999999854110 0 00
Q ss_pred HHHHHH--------HHHHHHh--hcCccEEEEcCcchH--HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccc--cc
Q 001781 268 LWEQIA--------GQISILG--QEQYSLIDWSIFDGI--IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANR--LP 333 (1013)
Q Consensus 268 ~~r~i~--------~Li~lLk--~~kpDIIh~~~~~~~--lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~--l~ 333 (1013)
.+..+. .+..+++ ..+||+||++..... ..+.++++. .++|+|+++|+...... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~----------~~~~~v~~~~d~~~~~~~~~~ 150 (412)
T PRK10307 81 GLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARL----------SGARTWLHIQDYEVDAAFGLG 150 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHh----------hCCCEEEEeccCCHHHHHHhC
Confidence 000000 0111222 268999999865432 233344433 35789999987431100 00
Q ss_pred hhhhhhHHHHHHH-HHHHhccccEEEEcCCCchhhhc--cCCCCCEEEeCCCCCCcccccccCcch--hHHHHHHHcCCC
Q 001781 334 VYVERGFQNLLSY-WKSVFSRVNVIVFPDYTLPMLYS--VLDAGNFFVIPGSPADVWAVEAYSKSH--EKYQLRKENGFL 408 (1013)
Q Consensus 334 ~y~~~~l~klLs~-~~~~l~~AD~VI~~S~~~~~ly~--~l~~~ki~VIPnggVDl~~~~~F~p~~--~~~~~R~~lgi~ 408 (1013)
......+.++... ....++.+|.+++.+........ +.+..++.+|||+ +|. +.|.+.. ....++.+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ng-vd~---~~~~~~~~~~~~~~~~~~~~~ 226 (412)
T PRK10307 151 LLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNW-SEV---ARFQPVADADVDALRAQLGLP 226 (412)
T ss_pred CccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCC-cCH---hhcCCCCccchHHHHHHcCCC
Confidence 0000111111111 12356789999999887765432 4566789999997 776 6665432 234578889999
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEc
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~Fl 488 (1013)
+++++|+|+|++.+ .||++.+++|+..+.+ .++++ ++|+|+|+.. +.++++++++++. +|+|+
T Consensus 227 ~~~~~i~~~G~l~~----~kg~~~li~a~~~l~~--------~~~~~-l~ivG~g~~~--~~l~~~~~~~~l~--~v~f~ 289 (412)
T PRK10307 227 DGKKIVLYSGNIGE----KQGLELVIDAARRLRD--------RPDLI-FVICGQGGGK--ARLEKMAQCRGLP--NVHFL 289 (412)
T ss_pred CCCEEEEEcCcccc----ccCHHHHHHHHHHhcc--------CCCeE-EEEECCChhH--HHHHHHHHHcCCC--ceEEe
Confidence 88999999999866 7999999999986622 15799 5699999865 8899999999996 69999
Q ss_pred CC--cccHHHHHHHccEEEEccCCCCCC----ccHHHHHHHHhCCCEEEcCCCC--chhhhccCCeEEEEcCCCHHHHHH
Q 001781 489 GF--NGDVNGVLLMADIVLYGSSQVEQG----FPSLIVRAMTFGIPVITPDFPI--IKEYVAEGAQVIFFQKDNPEGLSR 560 (1013)
Q Consensus 489 G~--~eDl~~lLaaADIfVlPS~~EEEG----FGivVLEAMA~G~PVIASdvgG--i~EiI~dG~~G~Lv~p~D~eeLAe 560 (1013)
|. .+++..+|+.||++|+||..| + +|.+++|||+||+|||+++.+| ..|++. .+|++++++|++++++
T Consensus 290 G~~~~~~~~~~~~~aDi~v~ps~~e--~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~ 365 (412)
T PRK10307 290 PLQPYDRLPALLKMADCHLLPQKAG--AADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVA 365 (412)
T ss_pred CCCCHHHHHHHHHhcCEeEEeeccC--cccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHH
Confidence 95 468999999999999999987 6 6888999999999999999876 468887 5899999999999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHH-hhcHHHHHHHHHHHHHHHhc
Q 001781 561 AFSLFISNGKLSKFARTVASAGRLHAK-NMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 561 AI~~LL~d~elR~~~~~Mg~aARe~ae-~fs~e~~~~~y~~Lye~lL~ 607 (1013)
+|.++++|+++ +++|+++|++.++ +|+|+.++++|.++|++++.
T Consensus 366 ~i~~l~~~~~~---~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 366 AIAALARQALL---RPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHhCHHH---HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 99999999876 4899999999765 69999999999999998864
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=310.58 Aligned_cols=290 Identities=14% Similarity=0.138 Sum_probs=218.5
Q ss_pred HHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEE-EcCCccccccchhhhhhHHHHHHHHHH-
Q 001781 272 IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWI-IQEDSLANRLPVYVERGFQNLLSYWKS- 349 (1013)
Q Consensus 272 i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~t-vHg~~l~~~l~~y~~~~l~klLs~~~~- 349 (1013)
+..+..++++.+||+||+|++.+.+.+.++++.. ++|+|.+ .|+. .... .. ..+...|..
T Consensus 269 ~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~la----------gvpviv~~~h~~--~~~~-~~-----r~~~~e~~~~ 330 (578)
T PRK15490 269 IKHLVPHLCERKLDYLSVWQDGACLMIALAALIA----------GVPRIQLGLRGL--PPVV-RK-----RLFKPEYEPL 330 (578)
T ss_pred HHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhc----------CCCEEEEeeccc--CCcc-hh-----hHHHHHHHHh
Confidence 4458899999999999999998877777777654 4788644 5541 1111 00 011111111
Q ss_pred -----HhccccEEEEcCCCchhh---hccCCCCCEEEeCCCCCCcccccccCcchh-HHHHHH--HcCCCCCcEEEEEEc
Q 001781 350 -----VFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHE-KYQLRK--ENGFLKDEIVVVVVG 418 (1013)
Q Consensus 350 -----~l~~AD~VI~~S~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p~~~-~~~~R~--~lgi~~d~~vIL~VG 418 (1013)
.+..+| ++..+...... +.+++.+++.+|||+ +|. ..|.+... ....+. ..+++++.++|+++|
T Consensus 331 ~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNG-VD~---~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~Vg 405 (578)
T PRK15490 331 YQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNG-VLP---PSTEPSSEVPHKIWQQFTQKTQDADTTIGGVF 405 (578)
T ss_pred hhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCC-cch---hhcCccchhhHHHHHHhhhccCCCCcEEEEEE
Confidence 122223 23333332222 235788999999997 887 77765332 112333 334566778999999
Q ss_pred cCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHH
Q 001781 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL 498 (1013)
Q Consensus 419 Rl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lL 498 (1013)
|+.. .||+..+++++..+.+.. |+++ ++|+|+|+.. +.++++++++++.+ +|+|+|+.+|+..+|
T Consensus 406 Rl~~----~Kg~~~LI~A~a~llk~~-------pdir-LvIVGdG~~~--eeLk~la~elgL~d-~V~FlG~~~Dv~~~L 470 (578)
T PRK15490 406 RFVG----DKNPFAWIDFAARYLQHH-------PATR-FVLVGDGDLR--AEAQKRAEQLGILE-RILFVGASRDVGYWL 470 (578)
T ss_pred EEeh----hcCHHHHHHHHHHHHhHC-------CCeE-EEEEeCchhH--HHHHHHHHHcCCCC-cEEECCChhhHHHHH
Confidence 9866 899999999998886553 6899 5699999865 89999999999987 999999999999999
Q ss_pred HHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHH---HHHhCcccHHHH
Q 001781 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFS---LFISNGKLSKFA 575 (1013)
Q Consensus 499 aaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~---~LL~d~elR~~~ 575 (1013)
+.+|+||+||.+| |||++++|||+||+|||++++||.+|+|.++.+|++++++|++++++++. .++++... .
T Consensus 471 aaADVfVlPS~~E--Gfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~---~ 545 (578)
T PRK15490 471 QKMNVFILFSRYE--GLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRS---R 545 (578)
T ss_pred HhCCEEEEccccc--CccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHH---H
Confidence 9999999999998 99999999999999999999999999999999999999999999888873 34443332 3
Q ss_pred HHHHHHHHHHH-HhhcHHHHHHHHHHHHHH
Q 001781 576 RTVASAGRLHA-KNMLALDCVTRYARILEN 604 (1013)
Q Consensus 576 ~~Mg~aARe~a-e~fs~e~~~~~y~~Lye~ 604 (1013)
..|+++|++.+ ++|+++.++++|.++|.+
T Consensus 546 ~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 546 TGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 67999999966 579999999999999975
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-31 Score=291.16 Aligned_cols=325 Identities=18% Similarity=0.201 Sum_probs=244.5
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc--h------------------HHHHHHHHHHHHHhhcC
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--H------------------SLWEQIAGQISILGQEQ 283 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~--~------------------~~~r~i~~Li~lLk~~k 283 (1013)
||+++++++..||.+..+.++++.|.+.||+|.+++...... . ..+..+..+.+.+++.+
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLIKKNK 80 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecCCCccHHHHHHHHHHHHhcCC
Confidence 588999999889999999999999999999999998755331 0 11123334566777899
Q ss_pred ccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCC
Q 001781 284 YSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYT 363 (1013)
Q Consensus 284 pDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~ 363 (1013)
||+||++......+..+..+.. ....+|++.|+............ . ...+. ....+.++.+++.+..
T Consensus 81 ~Dvv~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~i~~s~~ 147 (358)
T cd03812 81 YDIVHVHGSSASGFILLAAKKA---------GVKVRIAHSHNTSDSHDKKKKIL-K-YKVLR--KLINRLATDYLACSEE 147 (358)
T ss_pred CCEEEEeCcchhHHHHHHHhhC---------CCCeEEEEeccccccccccchhh-H-HHHHH--HHHHhcCCEEEEcCHH
Confidence 9999998776544444444332 22335667777543322211111 0 01111 2245668888888766
Q ss_pred chhhh-ccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHH
Q 001781 364 LPMLY-SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLI 442 (1013)
Q Consensus 364 ~~~ly-~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~ 442 (1013)
..... ......++.+|||+ +|. ..+.+.......+...+...++++|+++||+.+ .||++.+++|+..+.+
T Consensus 148 ~~~~~~~~~~~~~~~vi~ng-vd~---~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~----~Kg~~~li~a~~~l~~ 219 (358)
T cd03812 148 AGKWLFGKVKNKKFKVIPNG-IDL---EKFIFNEEIRKKRRELGILEDKFVIGHVGRFSE----QKNHEFLIEIFAELLK 219 (358)
T ss_pred HHHHHHhCCCcccEEEEecc-CcH---HHcCCCchhhhHHHHcCCCCCCEEEEEEecccc----ccChHHHHHHHHHHHH
Confidence 55442 22456789999997 777 666443322223566777888999999999866 7999999999999976
Q ss_pred HHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHH
Q 001781 443 KYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRA 522 (1013)
Q Consensus 443 ~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEA 522 (1013)
+. ++++ ++|+|+++.. +.+++.++++++.+ +|+|+|..+++..+|+.||++|+||..| +||++++||
T Consensus 220 ~~-------~~~~-l~ivG~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~v~ps~~E--~~~~~~lEA 286 (358)
T cd03812 220 KN-------PNAK-LLLVGDGELE--EEIKKKVKELGLED-KVIFLGVRNDVPELLQAMDVFLFPSLYE--GLPLVLIEA 286 (358)
T ss_pred hC-------CCeE-EEEEeCCchH--HHHHHHHHhcCCCC-cEEEecccCCHHHHHHhcCEEEeccccc--CCCHHHHHH
Confidence 54 6899 5799998865 88999999999997 9999999889999999999999999997 999999999
Q ss_pred HHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Q 001781 523 MTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA 586 (1013)
Q Consensus 523 MA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a 586 (1013)
||+|+|||+|+.||.+|++.+ ..|++..++++++++++|.+++++++++ +++...++...
T Consensus 287 ma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~---~~~~~~~~~~~ 346 (358)
T cd03812 287 QASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRE---RSSESIKKKGL 346 (358)
T ss_pred HHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchh---hhhhhhhhccc
Confidence 999999999999999999998 5677777778999999999999999874 55655555433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-31 Score=290.91 Aligned_cols=319 Identities=17% Similarity=0.215 Sum_probs=247.5
Q ss_pred EecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc--------------------hHHHHHHHHHHHHHhhcCccEE
Q 001781 228 ILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--------------------HSLWEQIAGQISILGQEQYSLI 287 (1013)
Q Consensus 228 I~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~--------------------~~~~r~i~~Li~lLk~~kpDII 287 (1013)
+++++..||.+.++.++++.|.+.||+|.+++...... ......+..+.+.+++.+||+|
T Consensus 3 ~~~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dii 82 (355)
T cd03819 3 VLPALESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVDIV 82 (355)
T ss_pred cchhhccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCCCEE
Confidence 56778889999999999999999999999987532110 0111233446778888999999
Q ss_pred EEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhh
Q 001781 288 DWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML 367 (1013)
Q Consensus 288 h~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~l 367 (1013)
|.+.....+...+..+. .++|+|+++|+...... .+...+..+|.+++.+......
T Consensus 83 ~~~~~~~~~~~~~~~~~----------~~~~~i~~~h~~~~~~~--------------~~~~~~~~~~~vi~~s~~~~~~ 138 (355)
T cd03819 83 HARSRAPAWSAYLAARR----------TRPPFVTTVHGFYSVNF--------------RYNAIMARGDRVIAVSNFIADH 138 (355)
T ss_pred EECCCchhHHHHHHHHh----------cCCCEEEEeCCchhhHH--------------HHHHHHHhcCEEEEeCHHHHHH
Confidence 99876655555444432 35899999998632110 1233456789999988766554
Q ss_pred h---ccCCCCCEEEeCCCCCCcccccccCcch----hHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHH
Q 001781 368 Y---SVLDAGNFFVIPGSPADVWAVEAYSKSH----EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1013)
Q Consensus 368 y---~~l~~~ki~VIPnggVDl~~~~~F~p~~----~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~L 440 (1013)
. .+++..++.+|||+ +|. ..|.+.. ....+++.++.+++.++|+++||+.+ .||++.+++++..+
T Consensus 139 ~~~~~~~~~~k~~~i~ng-i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~----~Kg~~~li~~~~~l 210 (355)
T cd03819 139 IRENYGVDPDRIRVIPRG-VDL---DRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTR----WKGQEVFIEALARL 210 (355)
T ss_pred HHHhcCCChhhEEEecCC-ccc---cccCccccchHHHHHHHHHcCCCCCceEEEEeecccc----ccCHHHHHHHHHHH
Confidence 3 34566789999997 776 5554322 11235777888888999999999866 79999999999988
Q ss_pred HHHHhhcccCCCCeEEEEEEcCCCcc--cHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEcc-CCCCCCccH
Q 001781 441 LIKYARRNSVEGSFKFVFLCGNSTDG--YNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGS-SQVEQGFPS 517 (1013)
Q Consensus 441 l~~~~~lk~~gpdikFLVIvG~G~e~--Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS-~~EEEGFGi 517 (1013)
.+.. ++++ ++++|.++.. +.+.+++.++++++.+ +|+|+|..+++..+|+.||++++|| ..| +||+
T Consensus 211 ~~~~-------~~~~-l~ivG~~~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~l~~ad~~i~ps~~~e--~~~~ 279 (355)
T cd03819 211 KKDD-------PDVH-LLIVGDAQGRRFYYAELLELIKRLGLQD-RVTFVGHCSDMPAAYALADIVVSASTEPE--AFGR 279 (355)
T ss_pred HhcC-------CCeE-EEEEECCcccchHHHHHHHHHHHcCCcc-eEEEcCCcccHHHHHHhCCEEEecCCCCC--CCch
Confidence 6542 5788 5788987643 4455677888889886 8999999999999999999999999 666 9999
Q ss_pred HHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHHhhcHH
Q 001781 518 LIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLAL 592 (1013)
Q Consensus 518 vVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~-d~elR~~~~~Mg~aARe~ae~fs~e 592 (1013)
+++|||+||+|||+++.++..|++.++.+|++++++|+++++++|..++. +++. +.+|+++|++.++++++.
T Consensus 280 ~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~---~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 280 TAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEG---RAKMFAKARMCVETLFSY 352 (355)
T ss_pred HHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHH---HHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999976665 5554 599999999987666554
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=295.33 Aligned_cols=346 Identities=14% Similarity=0.173 Sum_probs=252.7
Q ss_pred CEEEEEecccCC---CCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------HHH-------HHHHH----HHHHH
Q 001781 223 PRIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------SLW-------EQIAG----QISIL 279 (1013)
Q Consensus 223 ~RIalI~g~l~~---gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~---------~~~-------r~i~~----Li~lL 279 (1013)
++|++|...+.+ ||.+.++.++++.|.+. ++|.+++...+... ..+ ..+.. +....
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQRFDSEGLTVKGYRPWSELKEANKALGTFSVDLAMAN 79 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCchhcCCCeEEEEecChhhccchhhhhhhhhHHHHHhh
Confidence 478999988876 78889999999999886 56666554322100 000 00111 11122
Q ss_pred hhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc-ccch--hhhhhHHHHHHHHHHHhccccE
Q 001781 280 GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN-RLPV--YVERGFQNLLSYWKSVFSRVNV 356 (1013)
Q Consensus 280 k~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~-~l~~--y~~~~l~klLs~~~~~l~~AD~ 356 (1013)
...++|+||+|.+...+.+.++.+. .++|+|+++|+..... +... .....+..++ ....++.+|.
T Consensus 80 ~~~~~divh~~~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ad~ 147 (388)
T TIGR02149 80 DPVDADVVHSHTWYTFLAGHLAKKL----------YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWA--EKTAIEAADR 147 (388)
T ss_pred CCCCCCeEeecchhhhhHHHHHHHh----------cCCCEEEEeecccccccccccccccchhHHHHH--HHHHHhhCCE
Confidence 2347999999987666655554432 4689999999853211 1000 0000011111 1335678999
Q ss_pred EEEcCCCchhh----hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHH
Q 001781 357 IVFPDYTLPML----YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432 (1013)
Q Consensus 357 VI~~S~~~~~l----y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dl 432 (1013)
+++.+...... +.+++..++.+|||+ +|. ..|.+. .....+.+++++++.++|+++||+.+ .||++.
T Consensus 148 vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng-~~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~Grl~~----~Kg~~~ 218 (388)
T TIGR02149 148 VIAVSGGMREDILKYYPDLDPEKVHVIYNG-IDT---KEYKPD-DGNVVLDRYGIDRSRPYILFVGRITR----QKGVPH 218 (388)
T ss_pred EEEccHHHHHHHHHHcCCCCcceEEEecCC-CCh---hhcCCC-chHHHHHHhCCCCCceEEEEEccccc----ccCHHH
Confidence 99998776543 224556789999997 776 666553 34557788899888999999999876 799999
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc--ccHHHHHHHHHHcCCCCCcEEEcC---CcccHHHHHHHccEEEEc
Q 001781 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD--GYNDALQEVASRLGLLEHSVRHYG---FNGDVNGVLLMADIVLYG 507 (1013)
Q Consensus 433 LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e--~Y~e~Lkela~eLgL~dg~V~FlG---~~eDl~~lLaaADIfVlP 507 (1013)
+++|+..+. ++++ ++++|.++. .+.+.+++.+++++...++|.+.+ ..+++..+|+.||++|+|
T Consensus 219 li~a~~~l~----------~~~~-l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~p 287 (388)
T TIGR02149 219 LLDAVHYIP----------KDVQ-VVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCP 287 (388)
T ss_pred HHHHHHHHh----------hcCc-EEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeC
Confidence 999998773 2566 446665443 234667777777776433577764 357899999999999999
Q ss_pred cCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCH------HHHHHHHHHHHhCcccHHHHHHHHHH
Q 001781 508 SSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNP------EGLSRAFSLFISNGKLSKFARTVASA 581 (1013)
Q Consensus 508 S~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~------eeLAeAI~~LL~d~elR~~~~~Mg~a 581 (1013)
|.+| +||++++|||+||+|||+++.|+.+|++.++.+|++++++|+ ++++++|.+++++++. +++|+++
T Consensus 288 s~~e--~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~ 362 (388)
T TIGR02149 288 SIYE--PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL---AKKMGIA 362 (388)
T ss_pred CccC--CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH---HHHHHHH
Confidence 9998 999999999999999999999999999999999999999998 9999999999999876 4899999
Q ss_pred HHHHH-HhhcHHHHHHHHHHHHHHHh
Q 001781 582 GRLHA-KNMLALDCVTRYARILENVL 606 (1013)
Q Consensus 582 ARe~a-e~fs~e~~~~~y~~Lye~lL 606 (1013)
+++.+ ++|+|+.++++|.++|++++
T Consensus 363 a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 363 GRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 99955 67999999999999999864
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=294.57 Aligned_cols=336 Identities=14% Similarity=0.102 Sum_probs=247.6
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch-H---H----H---------HHHHHH----HHH----
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-S---L----W---------EQIAGQ----ISI---- 278 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-~---~----~---------r~i~~L----i~l---- 278 (1013)
||+++.+.+..||.+.++.++++.|.+.||+|.+++....+.. . . . .....+ ...
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADIELSEEEKEIYLEWNEENAERP 80 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCCCCCHHHHHHHHHHHHHHhccc
Confidence 5899999999999999999999999999999999876543211 0 0 0 000001 111
Q ss_pred HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
+...+||+||+|.+....+..+.. . .++|+|++.|...... . ....+++ ...++.+|.++
T Consensus 81 ~~~~~~Dvv~~h~~~~~~~~~~~~--~---------~~~~~i~~~H~~~~~~-~-----~~~~~~~---~~~~~~~d~~i 140 (372)
T cd03792 81 LLDLDADVVVIHDPQPLALPLFKK--K---------RGRPWIWRCHIDLSSP-N-----RRVWDFL---QPYIEDYDAAV 140 (372)
T ss_pred cccCCCCEEEECCCCchhHHHhhh--c---------CCCeEEEEeeeecCCC-c-----HHHHHHH---HHHHHhCCEEe
Confidence 225689999999776433322221 1 3589999999853211 1 1111222 23456788888
Q ss_pred EcCCCchhhhccCCCCCEEEeCCCCCCccccc--ccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVE--AYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 359 ~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~--~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
+++.... ...+...++ +|||+ +|..... .+.+ ......+.++++++++++|+++||+.+ .||++.+++|
T Consensus 141 ~~~~~~~--~~~~~~~~~-vipng-vd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~vgrl~~----~Kg~~~ll~a 211 (372)
T cd03792 141 FHLPEYV--PPQVPPRKV-IIPPS-IDPLSGKNRELSP-ADIEYILEKYGIDPERPYITQVSRFDP----WKDPFGVIDA 211 (372)
T ss_pred ecHHHhc--CCCCCCceE-EeCCC-CCCCccccCCCCH-HHHHHHHHHhCCCCCCcEEEEEecccc----ccCcHHHHHH
Confidence 8773222 123444445 99997 8862100 1111 234567788999989999999999977 8999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcc---cHHHHHHHHHHcCCCCCcEEEcCCc----ccHHHHHHHccEEEEccC
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDG---YNDALQEVASRLGLLEHSVRHYGFN----GDVNGVLLMADIVLYGSS 509 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~---Y~e~Lkela~eLgL~dg~V~FlG~~----eDl~~lLaaADIfVlPS~ 509 (1013)
+..+.+.. ++++ |+++|.++.. ..+.++++.+.+++.+ +|.|.|.. +++..+|+.||++++||.
T Consensus 212 ~~~l~~~~-------~~~~-l~i~G~g~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~ 282 (372)
T cd03792 212 YRKVKERV-------PDPQ-LVLVGSGATDDPEGWIVYEEVLEYAEGDP-DIHVLTLPPVSDLEVNALQRASTVVLQKSI 282 (372)
T ss_pred HHHHHhhC-------CCCE-EEEEeCCCCCCchhHHHHHHHHHHhCCCC-CeEEEecCCCCHHHHHHHHHhCeEEEeCCC
Confidence 99886542 5788 5689987642 2234566666678876 89999854 678899999999999999
Q ss_pred CCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-Hh
Q 001781 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KN 588 (1013)
Q Consensus 510 ~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~ 588 (1013)
+| |||++++||||||+|||+++.+|..++|.++.+|++++ +.++++.+|.++++++++ +++|++++++.+ ++
T Consensus 283 ~E--g~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll~~~~~---~~~~~~~a~~~~~~~ 355 (372)
T cd03792 283 RE--GFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLLRDPEL---RRKMGANAREHVREN 355 (372)
T ss_pred cc--CCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHH
Confidence 98 99999999999999999999999999999999999986 577899999999998876 489999999965 68
Q ss_pred hcHHHHHHHHHHHHHH
Q 001781 589 MLALDCVTRYARILEN 604 (1013)
Q Consensus 589 fs~e~~~~~y~~Lye~ 604 (1013)
|+|+.++++|.++|+.
T Consensus 356 ~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 356 FLITRHLKDYLYLISK 371 (372)
T ss_pred cCHHHHHHHHHHHHHh
Confidence 9999999999999986
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-30 Score=281.10 Aligned_cols=343 Identities=15% Similarity=0.161 Sum_probs=250.9
Q ss_pred EEEEEecccC--CCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHH------------------HHH-------HHHH
Q 001781 224 RIGLILGNMA--KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLW------------------EQI-------AGQI 276 (1013)
Q Consensus 224 RIalI~g~l~--~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~------------------r~i-------~~Li 276 (1013)
||++|++.+. .+|.+....++++.|.+.||+|++++.......... ... ....
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLAW 80 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHHH
Confidence 5889999884 588999999999999999999999987543311100 000 0011
Q ss_pred HHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccE
Q 001781 277 SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1013)
Q Consensus 277 ~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~ 356 (1013)
......++|+||.+................ .++|+|++.|+.........................++.++.
T Consensus 81 ~~~~~~~~dii~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd03821 81 LRLNIREADIVHVHGLWSYPSLAAARAARK--------YGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAA 152 (375)
T ss_pred HHHhCCCCCEEEEecccchHHHHHHHHHHH--------hCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCE
Confidence 223346899999976433221111111111 458999999985322111111111111111112335667888
Q ss_pred EEEcCCCchhh-hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHH
Q 001781 357 IVFPDYTLPML-YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1013)
Q Consensus 357 VI~~S~~~~~l-y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLe 435 (1013)
+++.+...... .......++.+|||+ +|. +.+.+...... +..++.+.++++|+++||+.+ .||++.+++
T Consensus 153 i~~~s~~~~~~~~~~~~~~~~~vi~~~-~~~---~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~----~K~~~~li~ 223 (375)
T cd03821 153 VHATSEQEAAEIRRLGLKAPIAVIPNG-VDI---PPFAALPSRGR-RRKFPILPDKRIILFLGRLHP----KKGLDLLIE 223 (375)
T ss_pred EEECCHHHHHHHHhhCCcccEEEcCCC-cCh---hccCcchhhhh-hhhccCCCCCcEEEEEeCcch----hcCHHHHHH
Confidence 88887544333 334456789999997 776 66655443333 677788888999999999866 799999999
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcc--cHHHHHHHccEEEEccCCCCC
Q 001781 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG--DVNGVLLMADIVLYGSSQVEQ 513 (1013)
Q Consensus 436 Afa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~e--Dl~~lLaaADIfVlPS~~EEE 513 (1013)
|+..+.++. ++++ ++++|.++..+...++.+++++++.+ +|+|+|..+ ++..+|+.||++|+||..|
T Consensus 224 a~~~l~~~~-------~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~adv~v~ps~~e-- 292 (375)
T cd03821 224 AFAKLAERF-------PDWH-LVIAGPDEGGYRAELKQIAAALGLED-RVTFTGMLYGEDKAAALADADLFVLPSHSE-- 292 (375)
T ss_pred HHHHhhhhc-------CCeE-EEEECCCCcchHHHHHHHHHhcCccc-eEEEcCCCChHHHHHHHhhCCEEEeccccC--
Confidence 999887653 6888 56999887766677788778999987 999999664 8999999999999999997
Q ss_pred CccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH-HHhhcHH
Q 001781 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH-AKNMLAL 592 (1013)
Q Consensus 514 GFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~-ae~fs~e 592 (1013)
+||++++|||+||+|||+++.++..|++.+ ..|++++. +.++++++|.+++++++. +++|++++++. .++|+|+
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRALELPQR---LKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999999998 78888874 569999999999999865 48999999996 7889999
Q ss_pred HHHHHHH
Q 001781 593 DCVTRYA 599 (1013)
Q Consensus 593 ~~~~~y~ 599 (1013)
+.+++|.
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9888775
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-30 Score=292.09 Aligned_cols=342 Identities=17% Similarity=0.144 Sum_probs=246.0
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc---------------------hHHHHH---H----HH
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS---------------------HSLWEQ---I----AG 274 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~---------------------~~~~r~---i----~~ 274 (1013)
++|+++.+++..||.+.+++++++.|.+.||+|++++...+.. ...... + ..
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRM 80 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHHHHHH
Confidence 4799999999999999999999999999999999998642210 000000 0 10
Q ss_pred HH-----HHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHH-HHHHHH-
Q 001781 275 QI-----SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQ-NLLSYW- 347 (1013)
Q Consensus 275 Li-----~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~-klLs~~- 347 (1013)
+. ..+...++|+||++....... . . +.. .+.|+|+++|...............+. ..+..+
T Consensus 81 ~~~~~~~~~~~~~~~Dvi~~~~~~~~~~-~-~-~~~---------~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 148 (392)
T cd03805 81 LYLALYLLLLPDEKYDVFIVDQVSACVP-L-L-KLF---------SPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLE 148 (392)
T ss_pred HHHHHHHHhcccCCCCEEEEcCcchHHH-H-H-HHh---------cCCcEEEEEecChHHhcCCCcHHHHHHHHHHHHHH
Confidence 00 134557999999976543322 1 1 112 237899999964321111001111111 111111
Q ss_pred HHHhccccEEEEcCCCchhhh----ccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCc
Q 001781 348 KSVFSRVNVIVFPDYTLPMLY----SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFY 423 (1013)
Q Consensus 348 ~~~l~~AD~VI~~S~~~~~ly----~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~y 423 (1013)
...++.+|.+++.+....... ......++.+|||+ +|. +.|.+..... .+......++.++|+++||+.+
T Consensus 149 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~-vd~---~~~~~~~~~~-~~~~~~~~~~~~~i~~~grl~~- 222 (392)
T cd03805 149 EFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPC-VDT---DSFESTSEDP-DPGLLIPKSGKKTFLSINRFER- 222 (392)
T ss_pred HHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCC-cCH---HHcCcccccc-cccccccCCCceEEEEEeeecc-
Confidence 234678999999887765542 23333445689996 776 6665433221 2333456677899999999866
Q ss_pred CccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcc------cHHHHHHHHHH-cCCCCCcEEEcCCc--ccH
Q 001781 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASR-LGLLEHSVRHYGFN--GDV 494 (1013)
Q Consensus 424 k~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~------Y~e~Lkela~e-LgL~dg~V~FlG~~--eDl 494 (1013)
.||++.+++|+..+.++.. ..++++ ++++|.++.. |.+.+++++++ +++.+ +|+|+|.. +++
T Consensus 223 ---~Kg~~~ll~a~~~l~~~~~----~~~~~~-l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~-~V~f~g~~~~~~~ 293 (392)
T cd03805 223 ---KKNIALAIEAFAILKDKLA----EFKNVR-LVIAGGYDPRVAENVEYLEELQRLAEELLLLED-QVIFLPSISDSQK 293 (392)
T ss_pred ---cCChHHHHHHHHHHHhhcc----cccCeE-EEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCc-eEEEeCCCChHHH
Confidence 7999999999999865531 114788 5688987652 45788999999 99997 99999955 567
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKF 574 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~ 574 (1013)
..+|+.||++++||..| +||++++|||+||+|||+++.||..|++.++.+|+++++ |+++++++|.+++++++.
T Consensus 294 ~~~l~~ad~~l~~s~~E--~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~--- 367 (392)
T cd03805 294 ELLLSSARALLYTPSNE--HFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDL--- 367 (392)
T ss_pred HHHHhhCeEEEECCCcC--CCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHH---
Confidence 89999999999999987 999999999999999999999999999999999999975 899999999999999876
Q ss_pred HHHHHHHHHHHH-HhhcHHHHHHH
Q 001781 575 ARTVASAGRLHA-KNMLALDCVTR 597 (1013)
Q Consensus 575 ~~~Mg~aARe~a-e~fs~e~~~~~ 597 (1013)
+++|++++++.+ ++|+|+.++++
T Consensus 368 ~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 368 ADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHHHHhcCHHHHhhh
Confidence 489999999965 67888877654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=304.62 Aligned_cols=351 Identities=16% Similarity=0.150 Sum_probs=254.8
Q ss_pred EEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCchH--------------------------------
Q 001781 224 RIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS-------------------------------- 267 (1013)
Q Consensus 224 RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~-------------------------------- 267 (1013)
+|++|+.++.+ ||...++-.|+++|.++||+|.|++...+....
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 58888888766 899999999999999999999999753221100
Q ss_pred ---------HH------------------HH---H-HHHHHHHhh--cCccEEEEcCcchHHHHHHHHHHhhhhcccCCC
Q 001781 268 ---------LW------------------EQ---I-AGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPF 314 (1013)
Q Consensus 268 ---------~~------------------r~---i-~~Li~lLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~ 314 (1013)
.+ .. + .....+++. .+||+||+|.++..++..++..... ...+
T Consensus 81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~----~~~~ 156 (476)
T cd03791 81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYA----DPFF 156 (476)
T ss_pred ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhc----cccC
Confidence 00 00 0 113344444 7999999999988776665554321 0112
Q ss_pred CCCcEEEEEcCCccccccchhhhhh---------------HHHHHHHHHHHhccccEEEEcCCCchhhhc----------
Q 001781 315 HSIPLVWIIQEDSLANRLPVYVERG---------------FQNLLSYWKSVFSRVNVIVFPDYTLPMLYS---------- 369 (1013)
Q Consensus 315 ~~IPVI~tvHg~~l~~~l~~y~~~~---------------l~klLs~~~~~l~~AD~VI~~S~~~~~ly~---------- 369 (1013)
.++|+|+|+|+.............. ....+...+..+..||.+++.|........
T Consensus 157 ~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~ 236 (476)
T cd03791 157 KNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDG 236 (476)
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHH
Confidence 4689999999954322111110000 000112233457789999998876554421
Q ss_pred --cCCCCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCC--CCcEEEEEEccCCCcCccc
Q 001781 370 --VLDAGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFL--KDEIVVVVVGSSFFYNELS 427 (1013)
Q Consensus 370 --~l~~~ki~VIPnggVDl~~~~~F~p~~------------------~~~~~R~~lgi~--~d~~vIL~VGRl~~yk~~~ 427 (1013)
.....++.+|+|+ +|. +.|.|.. .+..+++++|++ ++.++|+++||+.+ +
T Consensus 237 ~~~~~~~ki~~I~NG-id~---~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~----~ 308 (476)
T cd03791 237 LLRARAGKLSGILNG-IDY---DVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTE----Q 308 (476)
T ss_pred HHHhccCCeEEEeCC-CcC---cccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccc----c
Confidence 1235789999997 876 6665432 235578889985 78899999999976 8
Q ss_pred cCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC-Ccc-cHHHHHHHccEEE
Q 001781 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-FNG-DVNGVLLMADIVL 505 (1013)
Q Consensus 428 Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG-~~e-Dl~~lLaaADIfV 505 (1013)
||++.+++|+..+.+. +++ ++|+|.|+..+.+.++++++++ .+ +|.+.+ ..+ .+..+|+.||+++
T Consensus 309 Kg~~~li~a~~~l~~~---------~~~-lvi~G~g~~~~~~~~~~~~~~~--~~-~v~~~~~~~~~~~~~~~~~aDv~l 375 (476)
T cd03791 309 KGIDLLLEALPELLEL---------GGQ-LVILGSGDPEYEEALRELAARY--PG-RVAVLIGYDEALAHLIYAGADFFL 375 (476)
T ss_pred ccHHHHHHHHHHHHHc---------CcE-EEEEecCCHHHHHHHHHHHHhC--CC-cEEEEEeCCHHHHHHHHHhCCEEE
Confidence 9999999999888643 478 5689998766667788888865 33 677654 443 4568999999999
Q ss_pred EccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCC------eEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHH
Q 001781 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA------QVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVA 579 (1013)
Q Consensus 506 lPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~------~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg 579 (1013)
+||.+| +||++++|||+||+|||++++||++|+|.++. +|+++++.|+++++++|.+++++....+...+|+
T Consensus 376 ~pS~~E--~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~ 453 (476)
T cd03791 376 MPSRFE--PCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQ 453 (476)
T ss_pred CCCCCC--CCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 999998 99999999999999999999999999999987 9999999999999999999987433223346777
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHH
Q 001781 580 SAGRLHAKNMLALDCVTRYARILE 603 (1013)
Q Consensus 580 ~aARe~ae~fs~e~~~~~y~~Lye 603 (1013)
+++.+ ..|+|++++++|.++|+
T Consensus 454 ~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 454 RNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHhc--cCCChHHHHHHHHHHHh
Confidence 76654 57999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-30 Score=295.22 Aligned_cols=338 Identities=15% Similarity=0.120 Sum_probs=233.5
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHH-------------------H-----------HHHH
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL-------------------W-----------EQIA 273 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~-------------------~-----------r~i~ 273 (1013)
||+||++++... .-.++++|.+.||+|.+++......... + ..+.
T Consensus 1 ~il~~~~~~p~~-----~~~la~~L~~~G~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (396)
T cd03818 1 RILFVHQNFPGQ-----FRHLAPALAAQGHEVVFLTEPNAAPPPGGVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVA 75 (396)
T ss_pred CEEEECCCCchh-----HHHHHHHHHHCCCEEEEEecCCCCCCCCCeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHH
Confidence 578888887532 4579999999999999998754321100 0 1111
Q ss_pred HHHHH--HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEc------CCccccccc-hhhh---hhHH
Q 001781 274 GQISI--LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQ------EDSLANRLP-VYVE---RGFQ 341 (1013)
Q Consensus 274 ~Li~l--Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvH------g~~l~~~l~-~y~~---~~l~ 341 (1013)
..... .+.++||+||+|...+.. .+..... ..+|+|.+.| +........ .... .++.
T Consensus 76 ~~~~~~~~~~~~pdvi~~h~~~~~~--~~l~~~~---------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (396)
T cd03818 76 RALLALRAKGFRPDVIVAHPGWGET--LFLKDVW---------PDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLR 144 (396)
T ss_pred HHHHHHHhcCCCCCEEEECCccchh--hhHHHhC---------CCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHH
Confidence 11122 234689999998643321 1222211 3467776543 321110000 0000 1111
Q ss_pred HHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhH-HHHHHHcCCCCCcEEEEEEcc-
Q 001781 342 NLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEK-YQLRKENGFLKDEIVVVVVGS- 419 (1013)
Q Consensus 342 klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~-~~~R~~lgi~~d~~vIL~VGR- 419 (1013)
.........+..+|.+|+++......+......++.||||+ +|. +.|.+.... ...+....+.++.++|+|+||
T Consensus 145 ~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~ki~vI~ng-vd~---~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 145 NRNALILLALAQADAGVSPTRWQRSTFPAELRSRISVIHDG-IDT---DRLRPDPQARLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HhhhHhHHHHHhCCEEECCCHHHHhhCcHhhccceEEeCCC-ccc---cccCCCchhhhcccccccCCCCCeEEEEECCC
Confidence 11111234578899999998777665443335789999997 887 777654321 222233345567889999998
Q ss_pred CCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCccc-------HHHHHHHHHHcCC---CCCcEEEcC
Q 001781 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY-------NDALQEVASRLGL---LEHSVRHYG 489 (1013)
Q Consensus 420 l~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y-------~e~Lkela~eLgL---~dg~V~FlG 489 (1013)
+.+ .||++.+++|+..+.++. ++++ ++|+|++...| ....++++++++. .+ +|+|+|
T Consensus 221 l~~----~Kg~~~ll~a~~~l~~~~-------~~~~-lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~V~f~G 287 (396)
T cd03818 221 LEP----YRGFHVFMRALPRLLRAR-------PDAR-VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLS-RVHFLG 287 (396)
T ss_pred ccc----ccCHHHHHHHHHHHHHHC-------CCcE-EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcc-eEEEeC
Confidence 755 799999999999886653 6899 56888643211 0123344444442 34 899999
Q ss_pred Cc--ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001781 490 FN--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1013)
Q Consensus 490 ~~--eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~ 567 (1013)
.. +++..+|+.||++|+||..| ++|++++||||||+|||+++.|++.|++.++.+|++++++|+++++++|.++++
T Consensus 288 ~v~~~~~~~~l~~adv~v~~s~~e--~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 288 RVPYDQYLALLQVSDVHVYLTYPF--VLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CCCHHHHHHHHHhCcEEEEcCccc--ccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 54 68999999999999999988 999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHh-hcHHHHHHHHH
Q 001781 568 NGKLSKFARTVASAGRLHAKN-MLALDCVTRYA 599 (1013)
Q Consensus 568 d~elR~~~~~Mg~aARe~ae~-fs~e~~~~~y~ 599 (1013)
+++. +.+|++++++.+++ |+|+.++++|.
T Consensus 366 ~~~~---~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DPAR---RARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CHHH---HHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9876 48999999998766 88888888775
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-30 Score=281.27 Aligned_cols=337 Identities=17% Similarity=0.204 Sum_probs=253.3
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------------------HHHHHHHHHHHHHh
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------SLWEQIAGQISILG 280 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~---------------------~~~r~i~~Li~lLk 280 (1013)
||++|...+.+ +|.+..+..+++.|.+.||+|.+++....... ........+.+.++
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRLLD 80 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccchhhHHHHHH
Confidence 57888877766 78889999999999999999999987543100 00122233666777
Q ss_pred hcCccEEEEcCcchHH-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHH-HHHHHHHhccccEEE
Q 001781 281 QEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNL-LSYWKSVFSRVNVIV 358 (1013)
Q Consensus 281 ~~kpDIIh~~~~~~~l-v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~kl-Ls~~~~~l~~AD~VI 358 (1013)
..+||+||++...... ......+. .++|+++++|+.... ....+......+. ....+..++.+|.++
T Consensus 81 ~~~pdii~~~~~~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 149 (364)
T cd03814 81 AFAPDVVHIATPGPLGLAALRAARR----------LGIPVVTSYHTDFPE-YLRYYGLGPLSWLAWAYLRWFHNRADRVL 149 (364)
T ss_pred hcCCCEEEEeccchhhHHHHHHHHH----------cCCCEEEEEecChHH-HhhhcccchHhHhhHHHHHHHHHhCCEEE
Confidence 8999999987544322 22222222 468999999985321 1111111111111 112234567899999
Q ss_pred EcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHH
Q 001781 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1013)
Q Consensus 359 ~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa 438 (1013)
+.+......+......++.+++++ +|. +.|.+.......+..++ ..+.++|+++|++.. .||++.+++++.
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~g-~~~---~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~----~k~~~~~i~~~~ 220 (364)
T cd03814 150 VPSPSLADELRARGFRRVRLWPRG-VDT---ELFHPRRRDEALRARLG-PPDRPVLLYVGRLAP----EKNLEALLDADL 220 (364)
T ss_pred eCCHHHHHHHhccCCCceeecCCC-ccc---cccCcccccHHHHHHhC-CCCCeEEEEEecccc----ccCHHHHHHHHH
Confidence 998877765555556688899986 776 66655444444455566 556789999999855 799999999999
Q ss_pred HHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC--CcccHHHHHHHccEEEEccCCCCCCcc
Q 001781 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 439 ~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
.+.++ ++++ ++++|.++.. +.++ +..+ +|.|.| ..+++..+|+.||++++||..| +||
T Consensus 221 ~l~~~--------~~~~-l~i~G~~~~~--~~~~------~~~~-~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e--~~~ 280 (364)
T cd03814 221 PLRRR--------PPVR-LVIVGDGPAR--ARLE------ARYP-NVHFLGFLDGEELAAAYASADVFVFPSRTE--TFG 280 (364)
T ss_pred Hhhhc--------CCce-EEEEeCCchH--HHHh------ccCC-cEEEEeccCHHHHHHHHHhCCEEEECcccc--cCC
Confidence 88543 3788 5689988754 4444 4455 899999 5678999999999999999998 999
Q ss_pred HHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHH
Q 001781 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1013)
Q Consensus 517 ivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~ 596 (1013)
++++|||+||+|||+++.++..|++.++.+|+++++.|.++++++|.+++++++. +.+|++++++.+++++|++.++
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 357 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPEL---RRRMAARARAEAERRSWEAFLD 357 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHhhcCHHHHHH
Confidence 9999999999999999999999999998999999999999999999999999976 4899999999889999999999
Q ss_pred HHHHHHH
Q 001781 597 RYARILE 603 (1013)
Q Consensus 597 ~y~~Lye 603 (1013)
.+.++|+
T Consensus 358 ~~~~~~~ 364 (364)
T cd03814 358 NLLEAYR 364 (364)
T ss_pred HHHHhhC
Confidence 9998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-30 Score=286.66 Aligned_cols=334 Identities=18% Similarity=0.222 Sum_probs=248.4
Q ss_pred CCCceehHHHHHHHHHHCCCEEEEEEcCCCCchH--------------------------HH----HHHHHHHHHHhhc-
Q 001781 234 KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS--------------------------LW----EQIAGQISILGQE- 282 (1013)
Q Consensus 234 ~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~--------------------------~~----r~i~~Li~lLk~~- 282 (1013)
.||.+.++.++++.|.+.||+|.+++........ .+ .....+...++..
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRREG 99 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHhcC
Confidence 4889999999999999999999999753221000 00 1122245566666
Q ss_pred -CccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhh--hHHHHHHHHHHHhccccEEEE
Q 001781 283 -QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVER--GFQNLLSYWKSVFSRVNVIVF 359 (1013)
Q Consensus 283 -kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~--~l~klLs~~~~~l~~AD~VI~ 359 (1013)
+||+||++.....++....++. .++|+|++.|+............. ............++.+|.+++
T Consensus 100 ~~~Div~~~~~~~~~~~~~~~~~----------~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~ 169 (398)
T cd03800 100 GRPDLIHAHYWDSGLVALLLARR----------LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIA 169 (398)
T ss_pred CCccEEEEecCccchHHHHHHhh----------cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEE
Confidence 9999999876665555555433 358999999985322111000000 001111122345778999999
Q ss_pred cCCCchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 360 PDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 360 ~S~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
.+........ .....++.+|||+ +|. +.|.+.......+..++.+.++++|+++||+.. .||++.+++|
T Consensus 170 ~s~~~~~~~~~~~~~~~~~~~vi~ng-~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~----~k~~~~ll~a 241 (398)
T cd03800 170 STPQEAEELYSLYGAYPRRIRVVPPG-VDL---ERFTPYGRAEARRARLLRDPDKPRILAVGRLDP----RKGIDTLIRA 241 (398)
T ss_pred cCHHHHHHHHHHccccccccEEECCC-CCc---cceecccchhhHHHhhccCCCCcEEEEEccccc----ccCHHHHHHH
Confidence 9876543321 2334568999997 776 666544333333556677778899999999865 7999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcc----cHHHHHHHHHHcCCCCCcEEEcCC--cccHHHHHHHccEEEEccCC
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDG----YNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQ 510 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~----Y~e~Lkela~eLgL~dg~V~FlG~--~eDl~~lLaaADIfVlPS~~ 510 (1013)
+..+.++. ++++ ++++|.+... +...++++++++++.+ +|.|+|. .+++..+|+.||++++||..
T Consensus 242 ~~~l~~~~-------~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~adi~l~ps~~ 312 (398)
T cd03800 242 YAELPELR-------ERAN-LVIVGGPRDDILAMDEEELRELARELGVID-RVDFPGRVSREDLPALYRAADVFVNPALY 312 (398)
T ss_pred HHHHHHhC-------CCeE-EEEEECCCCcchhhhhHHHHHHHHhcCCCc-eEEEeccCCHHHHHHHHHhCCEEEecccc
Confidence 99886552 5788 4577876543 2345678889999987 9999996 46899999999999999999
Q ss_pred CCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-Hhh
Q 001781 511 VEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNM 589 (1013)
Q Consensus 511 EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~f 589 (1013)
| +||++++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.+++++++. +++|++++++.+ ++|
T Consensus 313 e--~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~---~~~~~~~a~~~~~~~~ 387 (398)
T cd03800 313 E--PFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPAL---RRRLSRAGLRRARARY 387 (398)
T ss_pred c--ccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhC
Confidence 8 9999999999999999999999999999999999999999999999999999999875 489999999977 889
Q ss_pred cHHHHHHHHH
Q 001781 590 LALDCVTRYA 599 (1013)
Q Consensus 590 s~e~~~~~y~ 599 (1013)
+|+.++++|.
T Consensus 388 s~~~~~~~~~ 397 (398)
T cd03800 388 TWERVAARLL 397 (398)
T ss_pred CHHHHHHHHh
Confidence 9999888875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=307.15 Aligned_cols=349 Identities=13% Similarity=0.104 Sum_probs=248.4
Q ss_pred CCEEEEEecccC-----------CCCceehHHHHHHHH--------HHCCC----EEEEEEcCCCC--------------
Q 001781 222 PPRIGLILGNMA-----------KDSRSLLLITVVKNL--------QKLGY----VFKIYAVRSGN-------------- 264 (1013)
Q Consensus 222 ~~RIalI~g~l~-----------~gg~~l~vl~Lak~L--------~e~Gy----eV~Vlt~~~g~-------------- 264 (1013)
..+|++|..... .||+.+++++++++| ++.|+ +|.++|-....
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~ 334 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVY 334 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccccc
Confidence 367888876651 388999999999975 68999 66687652110
Q ss_pred -----------ch--------------HHHHHHHH----HHHHHh---hcCccEEEEcCcchHHHHHHHHHHhhhhcccC
Q 001781 265 -----------SH--------------SLWEQIAG----QISILG---QEQYSLIDWSIFDGIIADSLEAKEAISSLMQE 312 (1013)
Q Consensus 265 -----------~~--------------~~~r~i~~----Li~lLk---~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qe 312 (1013)
+. .+|..+.. +.+.+. ..+||+||+|.+.+.+++.++++..
T Consensus 335 ~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l------- 407 (784)
T TIGR02470 335 GTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL------- 407 (784)
T ss_pred CCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-------
Confidence 00 01111111 222222 2479999999999999998887664
Q ss_pred CCCCCcEEEEEcCCccccccc---hhh-h---hhHHHHHHHHHHHhccccEEEEcCCCchh-------------------
Q 001781 313 PFHSIPLVWIIQEDSLANRLP---VYV-E---RGFQNLLSYWKSVFSRVNVIVFPDYTLPM------------------- 366 (1013)
Q Consensus 313 p~~~IPVI~tvHg~~l~~~l~---~y~-~---~~l~klLs~~~~~l~~AD~VI~~S~~~~~------------------- 366 (1013)
++|++.+.|.....+... ++. . ......+..-...++.||.||+.+..+..
T Consensus 408 ---gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~ 484 (784)
T TIGR02470 408 ---GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPG 484 (784)
T ss_pred ---CCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccc
Confidence 599999999743222110 010 0 00111111122467889999998864421
Q ss_pred hh---ccC--CCCCEEEeCCCCCCcccccccCcchhH------------------HHHHHHcCC--CCCcEEEEEEccCC
Q 001781 367 LY---SVL--DAGNFFVIPGSPADVWAVEAYSKSHEK------------------YQLRKENGF--LKDEIVVVVVGSSF 421 (1013)
Q Consensus 367 ly---~~l--~~~ki~VIPnggVDl~~~~~F~p~~~~------------------~~~R~~lgi--~~d~~vIL~VGRl~ 421 (1013)
+| .++ +..++.+||++ +|. +.|.|.... ...++.+|+ ++++++|+++||+.
T Consensus 485 Ly~vvnGid~~~~Ki~VVpPG-VD~---~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 485 LYRVVHGIDVFDPKFNIVSPG-ADE---SIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred eeeeecCccCCcCCeEEECCC-cCh---hhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 11 122 44688999986 887 666542211 112356665 56788999999997
Q ss_pred CcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc----------ccHHHHHHHHHHcCCCCCcEEEcCCc
Q 001781 422 FYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD----------GYNDALQEVASRLGLLEHSVRHYGFN 491 (1013)
Q Consensus 422 ~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e----------~Y~e~Lkela~eLgL~dg~V~FlG~~ 491 (1013)
+ .||++.+++|+.++.... ++++ |+|+|.+.. .+.+.++++++++++.+ +|.|+|..
T Consensus 561 ~----~KGid~LIeA~~~l~~l~-------~~~~-LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g-~V~flG~~ 627 (784)
T TIGR02470 561 R----VKNLTGLVECYGRSPKLR-------ELVN-LVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHG-QIRWIGAQ 627 (784)
T ss_pred c----cCCHHHHHHHHHHhHhhC-------CCeE-EEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCC-eEEEccCc
Confidence 7 899999999998764321 3577 557775432 13456788999999997 99999953
Q ss_pred ---ccHHHHHH----HccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHH
Q 001781 492 ---GDVNGVLL----MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSL 564 (1013)
Q Consensus 492 ---eDl~~lLa----aADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~ 564 (1013)
.++..+|. .+|+||+||.+| +||++++||||||+|||+|++||+.|+|.++.+|+++++.|+++++++|.+
T Consensus 628 ~~~~~~~elyr~iAd~adVfV~PS~~E--pFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ 705 (784)
T TIGR02470 628 LNRVRNGELYRYIADTKGIFVQPALYE--AFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVD 705 (784)
T ss_pred CCcccHHHHHHHhhccCcEEEECCccc--CCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHH
Confidence 45556664 247999999998 999999999999999999999999999999999999999999999999998
Q ss_pred HH----hCcccHHHHHHHHHHHHHHH-HhhcHHHHHHHHHHHH
Q 001781 565 FI----SNGKLSKFARTVASAGRLHA-KNMLALDCVTRYARIL 602 (1013)
Q Consensus 565 LL----~d~elR~~~~~Mg~aARe~a-e~fs~e~~~~~y~~Ly 602 (1013)
++ .|++. .++|+++|++.+ ++|+|+..++++.++.
T Consensus 706 ll~kll~dp~~---~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 706 FFEKCDEDPSY---WQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHhcCCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 86 47765 489999999965 7899999999988775
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=301.07 Aligned_cols=354 Identities=15% Similarity=0.146 Sum_probs=257.5
Q ss_pred CEEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCchH-------------------------------
Q 001781 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS------------------------------- 267 (1013)
Q Consensus 223 ~RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~------------------------------- 267 (1013)
++|++|..++.+ ||-.-++-.|.++|++.||+|.|+....+....
T Consensus 6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVTA 85 (489)
T ss_pred cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEec
Confidence 789999888877 787888889999999999998776542110000
Q ss_pred H---------------------H-------------HHHHH----HHHHHhh--cCccEEEEcCcchHHHHHHHHHHhhh
Q 001781 268 L---------------------W-------------EQIAG----QISILGQ--EQYSLIDWSIFDGIIADSLEAKEAIS 307 (1013)
Q Consensus 268 ~---------------------~-------------r~i~~----Li~lLk~--~kpDIIh~~~~~~~lv~~Laak~~~s 307 (1013)
. + ..+.. ...+++. .+|||||+|.+++.++..++.....
T Consensus 86 ~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~- 164 (489)
T PRK14098 86 LPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYA- 164 (489)
T ss_pred ccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhh-
Confidence 0 0 00000 2234433 5899999999998887776654321
Q ss_pred hcccCCCCCCcEEEEEcCCccccccchhhh---------hhHH---HHHHHHHHHhccccEEEEcCCCchhhhc------
Q 001781 308 SLMQEPFHSIPLVWIIQEDSLANRLPVYVE---------RGFQ---NLLSYWKSVFSRVNVIVFPDYTLPMLYS------ 369 (1013)
Q Consensus 308 ~l~qep~~~IPVI~tvHg~~l~~~l~~y~~---------~~l~---klLs~~~~~l~~AD~VI~~S~~~~~ly~------ 369 (1013)
....+.++|+|+|+|+............ .+.. ..++..+..+..||.|+++|...+....
T Consensus 165 --~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~ 242 (489)
T PRK14098 165 --DHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEA 242 (489)
T ss_pred --hccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCC
Confidence 0111357899999999542211100000 0000 1122334467889999999887765421
Q ss_pred -cCC------CCCEEEeCCCCCCcccccccCcch------------------hHHHHHHHcCCCC--CcEEEEEEccCCC
Q 001781 370 -VLD------AGNFFVIPGSPADVWAVEAYSKSH------------------EKYQLRKENGFLK--DEIVVVVVGSSFF 422 (1013)
Q Consensus 370 -~l~------~~ki~VIPnggVDl~~~~~F~p~~------------------~~~~~R~~lgi~~--d~~vIL~VGRl~~ 422 (1013)
+++ ..++.+|+|+ ||. +.|.|.. .+..++.++|++. +.++|+++||+.+
T Consensus 243 ~gl~~~l~~~~~kl~~I~NG-ID~---~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~ 318 (489)
T PRK14098 243 FGLDKVLEERKMRLHGILNG-IDT---RQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDD 318 (489)
T ss_pred cChHHHHHhcCCCeeEEeCC-ccc---cccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccc
Confidence 221 5789999997 887 7775532 2456777888873 5789999999977
Q ss_pred cCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHH
Q 001781 423 YNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLM 500 (1013)
Q Consensus 423 yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaa 500 (1013)
+||++++++|+..+.+ ++++ ++|+|.|+..+.+.++++++++ ++ +|.|.|.. +++..+|++
T Consensus 319 ----~KG~d~li~a~~~l~~---------~~~~-lvivG~G~~~~~~~l~~l~~~~--~~-~V~~~g~~~~~~~~~~~a~ 381 (489)
T PRK14098 319 ----FQGAELLAESLEKLVE---------LDIQ-LVICGSGDKEYEKRFQDFAEEH--PE-QVSVQTEFTDAFFHLAIAG 381 (489)
T ss_pred ----cCcHHHHHHHHHHHHh---------cCcE-EEEEeCCCHHHHHHHHHHHHHC--CC-CEEEEEecCHHHHHHHHHh
Confidence 8999999999998853 2688 5689998876678899999976 44 89999944 456899999
Q ss_pred ccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc----CCeEEEEcCCCHHHHHHHHHHHH---hCcccHH
Q 001781 501 ADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE----GAQVIFFQKDNPEGLSRAFSLFI---SNGKLSK 573 (1013)
Q Consensus 501 ADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d----G~~G~Lv~p~D~eeLAeAI~~LL---~d~elR~ 573 (1013)
||++|+||.+| +||++++|||+||+|||++++||+.|.|.+ +.+|+++++.|+++++++|.+++ ++++.
T Consensus 382 aDi~l~PS~~E--~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~-- 457 (489)
T PRK14098 382 LDMLLMPGKIE--SCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEER-- 457 (489)
T ss_pred CCEEEeCCCCC--CchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHH--
Confidence 99999999998 999999999999999999999999998864 67999999999999999999876 45543
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 574 FARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 574 ~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
.++|++++ ..++|+|+.++++|.++|+++++
T Consensus 458 -~~~~~~~~--~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 458 -WEELVLEA--MERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred -HHHHHHHH--hcCCCChHHHHHHHHHHHHHHhc
Confidence 46666654 34789999999999999998763
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=296.47 Aligned_cols=374 Identities=13% Similarity=0.058 Sum_probs=247.3
Q ss_pred hhcccc--ccCCCCCCccccccccCCeeeeeeccccccCCCCCCCCCCCCCCCCCEEEEEecccCCCCceehHHHHHHHH
Q 001781 171 QNSIAS--VFGAERGRPIREELRFGSRLKFVPDQVGFGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNL 248 (1013)
Q Consensus 171 ~~si~~--~~~~~~gg~~~~~~~~g~~~~~~~~~~~~g~~~~~~rs~~r~g~r~~RIalI~g~l~~gg~~l~vl~Lak~L 248 (1013)
...||| |++++||| ||+|+|..-. .+++.+. ...+++.+++.++.+.++ +.+..
T Consensus 33 ~~~v~f~HP~~~~ggG--------~ERvl~~a~~-----------~l~~~~~-~~~v~iyt~~~d~~~~~~----l~~~~ 88 (463)
T PLN02949 33 KRAVGFFHPYTNDGGG--------GERVLWCAVR-----------AIQEENP-DLDCVIYTGDHDASPDSL----AARAR 88 (463)
T ss_pred CcEEEEECCCCCCCCC--------hhhHHHHHHH-----------HHHhhCC-CCeEEEEcCCCCCCHHHH----HHHHH
Confidence 447788 99999999 9999884422 1222221 235677777766655221 22233
Q ss_pred HHCCCEE----EEEEc--CC-------CCchHHHHHHHHH---HHHHhhcCcc-EEEEcCcchHHHHHHHHHHhhhhccc
Q 001781 249 QKLGYVF----KIYAV--RS-------GNSHSLWEQIAGQ---ISILGQEQYS-LIDWSIFDGIIADSLEAKEAISSLMQ 311 (1013)
Q Consensus 249 ~e~GyeV----~Vlt~--~~-------g~~~~~~r~i~~L---i~lLk~~kpD-IIh~~~~~~~lv~~Laak~~~s~l~q 311 (1013)
...|+++ .++.. ++ +.+..+...++.+ ...+.+..|| +|++..+...+.. + +.
T Consensus 89 ~~~~i~~~~~~~~v~l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl--~-~~------- 158 (463)
T PLN02949 89 DRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPL--A-RL------- 158 (463)
T ss_pred hhcceecCCCceEEEeccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHH--H-Hh-------
Confidence 4555532 22212 11 1122223333332 2333335666 4455554443321 1 11
Q ss_pred CCCCCCcEEEEEcCCccccccch--------hh---------hhhHHHH-----HH-HHHHHhccccEEEEcCCCchhhh
Q 001781 312 EPFHSIPLVWIIQEDSLANRLPV--------YV---------ERGFQNL-----LS-YWKSVFSRVNVIVFPDYTLPMLY 368 (1013)
Q Consensus 312 ep~~~IPVI~tvHg~~l~~~l~~--------y~---------~~~l~kl-----Ls-~~~~~l~~AD~VI~~S~~~~~ly 368 (1013)
.++|+++++|.......+.. |. .....+. +. -+....+.+|.+++.|...+...
T Consensus 159 ---~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l 235 (463)
T PLN02949 159 ---FGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHI 235 (463)
T ss_pred ---cCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHH
Confidence 24799999998654421100 00 0001111 11 11223478999999887766542
Q ss_pred cc-CC-CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhh
Q 001781 369 SV-LD-AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYAR 446 (1013)
Q Consensus 369 ~~-l~-~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~ 446 (1013)
.. +. ..++.+++++ +|. ..+...+. ..+.++.+|+++||+.+ +||++++|+|++.+.++..
T Consensus 236 ~~~~~~~~~i~vvyp~-vd~---~~~~~~~~--------~~~~~~~~il~vGR~~~----~Kg~~llI~A~~~l~~~~~- 298 (463)
T PLN02949 236 EALWRIPERIKRVYPP-CDT---SGLQALPL--------ERSEDPPYIISVAQFRP----EKAHALQLEAFALALEKLD- 298 (463)
T ss_pred HHHcCCCCCeEEEcCC-CCH---HHcccCCc--------cccCCCCEEEEEEeeec----cCCHHHHHHHHHHHHHhcc-
Confidence 22 12 2467888885 765 33321110 01234568999999976 8999999999998865432
Q ss_pred cccCCCCeEEEEEEcCCC----cccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCCCCCccHHHH
Q 001781 447 RNSVEGSFKFVFLCGNST----DGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFPSLIV 520 (1013)
Q Consensus 447 lk~~gpdikFLVIvG~G~----e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~EEEGFGivVL 520 (1013)
...++++ |+|+|++. ..|.++|+++++++++.+ +|+|+|.. +++..+|+.||++|+||..| +||++++
T Consensus 299 --~~~~~~~-LvIvG~~~~~~~~~~~~eL~~la~~l~L~~-~V~f~g~v~~~el~~ll~~a~~~v~~s~~E--~FGivvl 372 (463)
T PLN02949 299 --ADVPRPK-LQFVGSCRNKEDEERLQKLKDRAKELGLDG-DVEFHKNVSYRDLVRLLGGAVAGLHSMIDE--HFGISVV 372 (463)
T ss_pred --ccCCCcE-EEEEeCCCCcccHHHHHHHHHHHHHcCCCC-cEEEeCCCCHHHHHHHHHhCcEEEeCCccC--CCChHHH
Confidence 2236789 67888763 234578999999999998 99999954 78999999999999999988 9999999
Q ss_pred HHHHhCCCEEEcCCCCch-hhhcc---CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHH
Q 001781 521 RAMTFGIPVITPDFPIIK-EYVAE---GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1013)
Q Consensus 521 EAMA~G~PVIASdvgGi~-EiI~d---G~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~ 596 (1013)
||||||+|||+++.||+. |++.+ +.+|++++ |+++++++|.+++++++ +.+++|+++|++.+++|+++++.+
T Consensus 373 EAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~--~~r~~m~~~ar~~~~~FS~e~~~~ 448 (463)
T PLN02949 373 EYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRE--TERLEIAAAARKRANRFSEQRFNE 448 (463)
T ss_pred HHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHcCHHHHHH
Confidence 999999999999999975 67665 67899985 99999999999999643 225899999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 001781 597 RYARILENVLNF 608 (1013)
Q Consensus 597 ~y~~Lye~lL~~ 608 (1013)
++.++|+++++.
T Consensus 449 ~~~~~i~~l~~~ 460 (463)
T PLN02949 449 DFKDAIRPILNS 460 (463)
T ss_pred HHHHHHHHHHhh
Confidence 999999988753
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-30 Score=287.84 Aligned_cols=326 Identities=12% Similarity=0.115 Sum_probs=239.9
Q ss_pred CEEEEEecccC-CCCceehHHHHHHHHHHC--CCEEEEEEcCCCCchHH--------------------HHHHHHHHHHH
Q 001781 223 PRIGLILGNMA-KDSRSLLLITVVKNLQKL--GYVFKIYAVRSGNSHSL--------------------WEQIAGQISIL 279 (1013)
Q Consensus 223 ~RIalI~g~l~-~gg~~l~vl~Lak~L~e~--GyeV~Vlt~~~g~~~~~--------------------~r~i~~Li~lL 279 (1013)
+||+++...+. .||.+.++.++++.|.+. |++|.+++......... ...+..+.+++
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 80 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFLRRAKHVYNFSKWL 80 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchhhhhcccHHHHHHHHHH
Confidence 47899988765 499999999999999999 89999887643211100 01234467888
Q ss_pred hhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEE
Q 001781 280 GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVF 359 (1013)
Q Consensus 280 k~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~ 359 (1013)
++.+||+||++.....++..++.+... ...+++.+.|........ + . + ..+..+|.+++
T Consensus 81 ~~~~~Dii~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~h~~~~~~~~--~------~----~-~~~~~~d~~i~ 139 (359)
T PRK09922 81 KETQPDIVICIDVISCLYANKARKKSG--------KQFKIFSWPHFSLDHKKH--A------E----C-KKITCADYHLA 139 (359)
T ss_pred HhcCCCEEEEcCHHHHHHHHHHHHHhC--------CCCeEEEEecCcccccch--h------h----h-hhhhcCCEEEE
Confidence 899999999987665555555554432 234566666653211110 0 0 0 11357899999
Q ss_pred cCCCchhhh--ccCCCCCEEEeCCCCCCcccccccC-cchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 360 PDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYS-KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 360 ~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F~-p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
.+....... .+++..++.+|||+ +|. +.+. +.. ...++++|+++||+... ..||++.+++|
T Consensus 140 ~S~~~~~~~~~~~~~~~ki~vi~N~-id~---~~~~~~~~----------~~~~~~~i~~~Grl~~~--~~k~~~~l~~a 203 (359)
T PRK09922 140 ISSGIKEQMMARGISAQRISVIYNP-VEI---KTIIIPPP----------ERDKPAVFLYVGRLKFE--GQKNVKELFDG 203 (359)
T ss_pred cCHHHHHHHHHcCCCHHHEEEEcCC-CCH---HHccCCCc----------ccCCCcEEEEEEEEecc--cCcCHHHHHHH
Confidence 887665442 34566789999996 775 3332 111 11346789999998642 26999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcc----cHHHHHHHccEEEEccCCCC
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG----DVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~e----Dl~~lLaaADIfVlPS~~EE 512 (1013)
+..+. ++++ ++|+|+|++. +.++++++++++.+ +|+|+|..+ ++..+|+.||++|+||.+|
T Consensus 204 ~~~~~----------~~~~-l~ivG~g~~~--~~l~~~~~~~~l~~-~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~E- 268 (359)
T PRK09922 204 LSQTT----------GEWQ-LHIIGDGSDF--EKCKAYSRELGIEQ-RIIWHGWQSQPWEVVQQKIKNVSALLLTSKFE- 268 (359)
T ss_pred HHhhC----------CCeE-EEEEeCCccH--HHHHHHHHHcCCCC-eEEEecccCCcHHHHHHHHhcCcEEEECCccc-
Confidence 97662 3688 5699999875 89999999999997 999999653 4677888999999999998
Q ss_pred CCccHHHHHHHHhCCCEEEcC-CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcH
Q 001781 513 QGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLA 591 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIASd-vgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~ 591 (1013)
|||++++||||||+|||+++ .+|..|+|.++.+|++++++|+++++++|.+++++++.| ...+.++.+.+|+.
T Consensus 269 -gf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~-----~~~~~~~~~~~~~~ 342 (359)
T PRK09922 269 -GFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKY-----QHDAIPNSIERFYE 342 (359)
T ss_pred -CcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccC-----CHHHHHHHHHHhhH
Confidence 99999999999999999999 899999999999999999999999999999999999853 12233334566666
Q ss_pred HHHHHHHHHHHHHHh
Q 001781 592 LDCVTRYARILENVL 606 (1013)
Q Consensus 592 e~~~~~y~~Lye~lL 606 (1013)
+....++.++|+.+.
T Consensus 343 ~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 343 VLYFKNLNNALFSKL 357 (359)
T ss_pred HHHHHHHHHHHHHHh
Confidence 666677777777654
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=285.71 Aligned_cols=332 Identities=14% Similarity=0.150 Sum_probs=243.7
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc----------h-----HHH---H-------HHHHHHHH
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS----------H-----SLW---E-------QIAGQISI 278 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~----------~-----~~~---r-------~i~~Li~l 278 (1013)
+|+++.+++.+. .+.++.++++.|+ |+++.+++...... . ... . ....+..+
T Consensus 1 ~~~~~~~~~~~~-~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (367)
T cd05844 1 RVLIFRPLLLAP-SETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALAVRLADLAGGKAGLRLGALRLLTGSAPQLRRL 77 (367)
T ss_pred CEEEEeCCCCCC-chHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccceeeeecccchhHHHHHHHHhccccccHHHHH
Confidence 356666666554 7889999999995 77777776532110 0 000 0 01124456
Q ss_pred HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
+++.+||+||++.....+......+. .++|+|+++|+.........................++.+|.++
T Consensus 78 ~~~~~~dvvh~~~~~~~~~~~~~~~~----------~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 147 (367)
T cd05844 78 LRRHRPDLVHAHFGFDGVYALPLARR----------LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFI 147 (367)
T ss_pred HHhhCCCEEEeccCchHHHHHHHHHH----------cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEE
Confidence 78899999999865544443333333 35899999998433211110000001111122234567899999
Q ss_pred EcCCCchhhhc--cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 359 FPDYTLPMLYS--VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 359 ~~S~~~~~ly~--~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
+.+...+.... +++..++.++|++ +|. +.|.+.. ...+.++|+++|++.+ .||++.+++|
T Consensus 148 ~~s~~~~~~~~~~~~~~~~i~vi~~g-~d~---~~~~~~~----------~~~~~~~i~~~G~~~~----~K~~~~li~a 209 (367)
T cd05844 148 AVSQFIRDRLLALGFPPEKVHVHPIG-VDT---AKFTPAT----------PARRPPRILFVGRFVE----KKGPLLLLEA 209 (367)
T ss_pred ECCHHHHHHHHHcCCCHHHeEEecCC-CCH---HhcCCCC----------CCCCCcEEEEEEeecc----ccChHHHHHH
Confidence 99877665532 4566789999996 776 5554321 1234568999999866 7999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCC---
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQV--- 511 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~E--- 511 (1013)
+..+.++. ++++ ++++|.++.. +.++++++++++.+ +|+|.|.. +++..+|+.||++|+||...
T Consensus 210 ~~~l~~~~-------~~~~-l~ivG~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~ 278 (367)
T cd05844 210 FARLARRV-------PEVR-LVIIGDGPLL--AALEALARALGLGG-RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSG 278 (367)
T ss_pred HHHHHHhC-------CCeE-EEEEeCchHH--HHHHHHHHHcCCCC-eEEECCCCCHHHHHHHHHhCCEEEECcccCCCC
Confidence 99887653 6888 6799988754 88999999999987 99999955 67999999999999999741
Q ss_pred -CCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-Hhh
Q 001781 512 -EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNM 589 (1013)
Q Consensus 512 -EEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~f 589 (1013)
.||||++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.++++++++ +.+|+.++++.+ ++|
T Consensus 279 ~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~a~~~~~~~~ 355 (367)
T cd05844 279 DAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDL---RARMGAAGRRRVEERF 355 (367)
T ss_pred CccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHHC
Confidence 139999999999999999999999999999999999999999999999999999998876 489999999976 679
Q ss_pred cHHHHHHHHHH
Q 001781 590 LALDCVTRYAR 600 (1013)
Q Consensus 590 s~e~~~~~y~~ 600 (1013)
+|+..+++|.+
T Consensus 356 s~~~~~~~l~~ 366 (367)
T cd05844 356 DLRRQTAKLEA 366 (367)
T ss_pred CHHHHHHHHhc
Confidence 99998888764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=271.91 Aligned_cols=323 Identities=17% Similarity=0.256 Sum_probs=250.9
Q ss_pred EEEEEecccC-CCCceehHHHHHHHHHHCCCEEEEEEcCCCC--ch--------------------HHHHHHHHHHHHHh
Q 001781 224 RIGLILGNMA-KDSRSLLLITVVKNLQKLGYVFKIYAVRSGN--SH--------------------SLWEQIAGQISILG 280 (1013)
Q Consensus 224 RIalI~g~l~-~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~--~~--------------------~~~r~i~~Li~lLk 280 (1013)
||++++..+. .+|.+..+..+++.|.+.||+|.+++..... .. ..+.....+.+.++
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARFKKLRRLRKLLK 80 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCccceeecccccccchhccccchHHHHHhhc
Confidence 5888999988 7999999999999999999999999875442 00 01122344677888
Q ss_pred hcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEc
Q 001781 281 QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1013)
Q Consensus 281 ~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~ 360 (1013)
..+||+|+.+... ....+..... ..+|+|++.|+........ . .........++.+|.+++.
T Consensus 81 ~~~~d~i~~~~~~--~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~---~----~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 81 NNKPDVVISFLTS--LLTFLASLGL---------KIVKLIVSEHNSPDAYKKR---L----RRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred ccCCCEEEEcCch--HHHHHHHHhh---------ccccEEEecCCCccchhhh---h----HHHHHHHHHHhcCCEEEEe
Confidence 8999999998766 2222222111 1248999989864322210 0 0011234467889999999
Q ss_pred CCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHH
Q 001781 361 DYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1013)
Q Consensus 361 S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~L 440 (1013)
+.............++.++||+ ++. ..+.+. .+.+.+.|+++|++.+ .||++.+++++..+
T Consensus 143 s~~~~~~~~~~~~~~~~vi~~~-~~~---~~~~~~-----------~~~~~~~i~~~g~~~~----~K~~~~l~~~~~~l 203 (348)
T cd03820 143 TEEDRALYYKKFNKNVVVIPNP-LPF---PPEEPS-----------SDLKSKRILAVGRLVP----QKGFDLLIEAWAKI 203 (348)
T ss_pred CHHHHHHhhccCCCCeEEecCC-cCh---hhcccc-----------CCCCCcEEEEEEeecc----ccCHHHHHHHHHHH
Confidence 8877544455667889999997 665 333221 2346779999999866 79999999999988
Q ss_pred HHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHH
Q 001781 441 LIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIV 520 (1013)
Q Consensus 441 l~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVL 520 (1013)
.+.. ++++ ++|+|.++.. ..++++++++++.+ +|.+.|..+++..+|+.||++++||..| +||++++
T Consensus 204 ~~~~-------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~i~ps~~e--~~~~~~~ 270 (348)
T cd03820 204 AKKH-------PDWK-LRIVGDGPER--EALEALIKELGLED-RVILLGFTKNIEEYYAKASIFVLTSRFE--GFPMVLL 270 (348)
T ss_pred HhcC-------CCeE-EEEEeCCCCH--HHHHHHHHHcCCCC-eEEEcCCcchHHHHHHhCCEEEeCcccc--ccCHHHH
Confidence 6532 6889 5689988865 88888899999987 9999999889999999999999999997 9999999
Q ss_pred HHHHhCCCEEEcCCC-CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHH
Q 001781 521 RAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYA 599 (1013)
Q Consensus 521 EAMA~G~PVIASdvg-Gi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~ 599 (1013)
|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.++++|++. +++|++++++.+++|+|++.+++|.
T Consensus 271 Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 271 EAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEEL---RKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 999999999999975 566777777799999999999999999999999987 4899999999999999999998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=276.67 Aligned_cols=339 Identities=18% Similarity=0.189 Sum_probs=248.3
Q ss_pred EEEEEecccC-CCCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------------HHHHHHHHHHHHHhhcCccEE
Q 001781 224 RIGLILGNMA-KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------SLWEQIAGQISILGQEQYSLI 287 (1013)
Q Consensus 224 RIalI~g~l~-~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~---------------~~~r~i~~Li~lLk~~kpDII 287 (1013)
||++|.+... .+|.+.++.++++.|.+.||+|.+++....... ........+...++..+||+|
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 80 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVV 80 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEE
Confidence 5788877666 489999999999999999999999976432200 001223346677888999999
Q ss_pred EEcCcchHH---HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcC-CC
Q 001781 288 DWSIFDGII---ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD-YT 363 (1013)
Q Consensus 288 h~~~~~~~l---v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S-~~ 363 (1013)
|++.....+ ......... ...++|+|+++|+......... .. ......++.+|.+++.+ ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~h~~~~~~~~~~------~~--~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 81 VIQHEYGIFGGEAGLYLLLLL-------RGLGIPVVVTLHTVLLHEPRPG------DR--ALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred EEeeccccccchhhHHHHHHH-------hhcCCCEEEEEecCCccccchh------hh--HHHHHHHhcCCEEEEeeHHH
Confidence 986532211 111111110 0146899999999721111100 01 11233567899999995 33
Q ss_pred chhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHH
Q 001781 364 LPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIK 443 (1013)
Q Consensus 364 ~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~ 443 (1013)
....+......++.+||++ ++. ..+.+.... +......+.++|+++|++.+ .||++.+++|+..+.++
T Consensus 146 ~~~~~~~~~~~~~~~i~~~-~~~---~~~~~~~~~----~~~~~~~~~~~i~~~G~~~~----~K~~~~ll~a~~~~~~~ 213 (366)
T cd03822 146 LRALLLRAYPEKIAVIPHG-VPD---PPAEPPESL----KALGGLDGRPVLLTFGLLRP----YKGLELLLEALPLLVAK 213 (366)
T ss_pred HHHHHhhcCCCcEEEeCCC-CcC---cccCCchhh----HhhcCCCCCeEEEEEeeccC----CCCHHHHHHHHHHHHhh
Confidence 3333333334789999996 665 444332111 34445667889999999866 79999999999988655
Q ss_pred HhhcccCCCCeEEEEEEcCCCcccHHHHH----HHHHHcCCCCCcEEEcCC---cccHHHHHHHccEEEEccCCCCCCcc
Q 001781 444 YARRNSVEGSFKFVFLCGNSTDGYNDALQ----EVASRLGLLEHSVRHYGF---NGDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 444 ~~~lk~~gpdikFLVIvG~G~e~Y~e~Lk----ela~eLgL~dg~V~FlG~---~eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
. ++++ ++++|.+.... ...+ ++++++++.+ +|+|.|. .+++..+|+.||++++||..|.+++|
T Consensus 214 ~-------~~~~-l~i~G~~~~~~-~~~~~~~~~~i~~~~~~~-~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~ 283 (366)
T cd03822 214 H-------PDVR-LLVAGETHPDL-ERYRGEAYALAERLGLAD-RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQS 283 (366)
T ss_pred C-------CCeE-EEEeccCccch-hhhhhhhHhHHHhcCCCC-cEEEecCcCCHHHHHHHHhhcCEEEecccccccccc
Confidence 3 6889 56889876541 2222 2378899997 9999985 57899999999999999998756999
Q ss_pred HHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHH
Q 001781 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1013)
Q Consensus 517 ivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~ 596 (1013)
++++|||+||+|||+++.|+ .+.+.++.+|++++++|+++++++|..++++++. ..+|++++++.+++|+|+++++
T Consensus 284 ~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~---~~~~~~~~~~~~~~~s~~~~~~ 359 (366)
T cd03822 284 GVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL---AQALRARAREYARAMSWERVAE 359 (366)
T ss_pred hHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH---HHHHHHHHHHHHhhCCHHHHHH
Confidence 99999999999999999999 7777788899999999999999999999999876 4889999999998999999999
Q ss_pred HHHHHHH
Q 001781 597 RYARILE 603 (1013)
Q Consensus 597 ~y~~Lye 603 (1013)
+|.++|+
T Consensus 360 ~~~~~~~ 366 (366)
T cd03822 360 RYLRLLA 366 (366)
T ss_pred HHHHHhC
Confidence 9998873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-29 Score=274.17 Aligned_cols=321 Identities=18% Similarity=0.259 Sum_probs=247.7
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch--------------------HHHHHHHHHHHHHhhcC
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------SLWEQIAGQISILGQEQ 283 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~--------------------~~~r~i~~Li~lLk~~k 283 (1013)
||++++..+.++ .+..+..+++.|.+.||+|.+++....... ..+.....+.+.++..+
T Consensus 1 ki~~~~~~~~~~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T cd03799 1 KIAYLVKEFPRL-SETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLG 79 (355)
T ss_pred CEEEECCCCCCc-chHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 588888888555 778899999999999999999987543211 00112222455666789
Q ss_pred ccEEEEcCcch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCC
Q 001781 284 YSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1013)
Q Consensus 284 pDIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~ 362 (1013)
+|+||++.... ..+..+..+. .++|+++++|+....... .. ......++.+|.+++.+.
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRL----------GGIPYSFTAHGKDIFRSP----DA------IDLDEKLARADFVVAISE 139 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHh----------cCCCEEEEEecccccccC----ch------HHHHHHHhhCCEEEECCH
Confidence 99999976543 3333333322 358999999985433221 00 123445778999999988
Q ss_pred Cchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHH
Q 001781 363 TLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGP 439 (1013)
Q Consensus 363 ~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~ 439 (1013)
.....+. +....++.+|||+ +|. +.+.+.. .....+.+.|+++|++.+ .||++.+++++..
T Consensus 140 ~~~~~l~~~~~~~~~~~~vi~~~-~d~---~~~~~~~--------~~~~~~~~~i~~~g~~~~----~k~~~~l~~~~~~ 203 (355)
T cd03799 140 YNRQQLIRLLGCDPDKIHVVHCG-VDL---ERFPPRP--------PPPPGEPLRILSVGRLVE----KKGLDYLLEALAL 203 (355)
T ss_pred HHHHHHHHhcCCCcccEEEEeCC-cCH---HHcCCcc--------ccccCCCeEEEEEeeecc----ccCHHHHHHHHHH
Confidence 7766543 3567889999997 776 5554322 112346789999999865 7999999999988
Q ss_pred HHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCC------C
Q 001781 440 LLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQ------V 511 (1013)
Q Consensus 440 Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~------E 511 (1013)
+.+. +++++ ++++|.++.. +.+++.++++++.+ +|++.|.. +++..+|+.||++++||.. |
T Consensus 204 l~~~-------~~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e 272 (355)
T cd03799 204 LKDR-------GIDFR-LDIVGDGPLR--DELEALIAELGLED-RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDRE 272 (355)
T ss_pred Hhhc-------CCCeE-EEEEECCccH--HHHHHHHHHcCCCC-eEEECCcCChHHHHHHHHhCCEEEecceecCCCCcc
Confidence 7543 26888 5688998875 88999999999987 99999965 7899999999999999998 7
Q ss_pred CCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-Hhhc
Q 001781 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNML 590 (1013)
Q Consensus 512 EEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs 590 (1013)
+||++++|||+||+|||+++.++.+|++.++.+|++++++|+++++++|.+++++++. +.+|++++++.+ ++|+
T Consensus 273 --~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~a~~~~~~~~s 347 (355)
T cd03799 273 --GLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPEL---RREMGEAGRARVEEEFD 347 (355)
T ss_pred --CccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999876 489999999966 5677
Q ss_pred HHHHHHH
Q 001781 591 ALDCVTR 597 (1013)
Q Consensus 591 ~e~~~~~ 597 (1013)
|+..+++
T Consensus 348 ~~~~~~~ 354 (355)
T cd03799 348 IRKQAAR 354 (355)
T ss_pred HHHHhhc
Confidence 7776643
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=269.94 Aligned_cols=342 Identities=18% Similarity=0.247 Sum_probs=251.9
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCchH---------------HH-------HHHHHHHHHH
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS---------------LW-------EQIAGQISIL 279 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~---------------~~-------r~i~~Li~lL 279 (1013)
||++++..+.+ +|.+..+..+++.|.+.||+|.+++........ .. .....+...+
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIIL 80 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHH
Confidence 57788877755 788899999999999999999999764321100 00 1112244557
Q ss_pred hhcCccEEEEcCcchHH-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc--ccchhhhhhHHHHH-HHHHHHhcccc
Q 001781 280 GQEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN--RLPVYVERGFQNLL-SYWKSVFSRVN 355 (1013)
Q Consensus 280 k~~kpDIIh~~~~~~~l-v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~--~l~~y~~~~l~klL-s~~~~~l~~AD 355 (1013)
+..+||+||.+...... ......+. .++|+|+++|...... .............. ......++.+|
T Consensus 81 ~~~~~Div~~~~~~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 150 (374)
T cd03817 81 KELGPDIVHTHTPFSLGLLGLRVARK----------LGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCD 150 (374)
T ss_pred hhcCCCEEEECCchhhhhHHHHHHHH----------cCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCC
Confidence 78999999997653322 22222221 4689999999843210 00000000001111 12334577899
Q ss_pred EEEEcCCCchhhhccC-CCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHH
Q 001781 356 VIVFPDYTLPMLYSVL-DAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAM 434 (1013)
Q Consensus 356 ~VI~~S~~~~~ly~~l-~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLL 434 (1013)
.+++.+......+... ...++.++|++ +|. ..+.+... ...+..+++.++.++|+++|++.. .||++.++
T Consensus 151 ~i~~~s~~~~~~~~~~~~~~~~~vi~~~-~~~---~~~~~~~~-~~~~~~~~~~~~~~~i~~~G~~~~----~k~~~~l~ 221 (374)
T cd03817 151 AVIAPSEKIADLLREYGVKRPIEVIPTG-IDL---DRFEPVDG-DDERRKLGIPEDEPVLLYVGRLAK----EKNIDFLI 221 (374)
T ss_pred EEEeccHHHHHHHHhcCCCCceEEcCCc-cch---hccCccch-hHHHHhcCCCCCCeEEEEEeeeec----ccCHHHHH
Confidence 9999988766553322 23458899986 776 66654332 233667788888899999999865 79999999
Q ss_pred HHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCCC
Q 001781 435 HDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 435 eAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~EE 512 (1013)
+++..+.++. ++++ ++++|.++.. +.++++++++++.+ +|.+.|.. +++..+|+.||++++||..|
T Consensus 222 ~~~~~~~~~~-------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e- 289 (374)
T cd03817 222 RAFARLLKEE-------PDVK-LVIVGDGPER--EELEELARELGLAD-RVIFTGFVPREELPDYYKAADLFVFASTTE- 289 (374)
T ss_pred HHHHHHHHhC-------CCeE-EEEEeCCchH--HHHHHHHHHcCCCC-cEEEeccCChHHHHHHHHHcCEEEeccccc-
Confidence 9999886552 5788 5688988764 88999999999987 99999954 78999999999999999998
Q ss_pred CCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHH
Q 001781 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL 592 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e 592 (1013)
++|++++|||+||+|||+++.++..|++.++.+|+++++.+. +++++|.+++++++. +++|++++++.+++++
T Consensus 290 -~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~-- 362 (374)
T cd03817 290 -TQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPEL---RRRLSKNAEESAEKFS-- 362 (374)
T ss_pred -CcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHH---HHHHHHHHHHHHHHHH--
Confidence 999999999999999999999999999999999999998877 999999999999986 3899999999998887
Q ss_pred HHHHHHHHHHHH
Q 001781 593 DCVTRYARILEN 604 (1013)
Q Consensus 593 ~~~~~y~~Lye~ 604 (1013)
..+.+.++|++
T Consensus 363 -~~~~~~~~~~~ 373 (374)
T cd03817 363 -FAKKVEKLYEE 373 (374)
T ss_pred -HHHHHHHHHhc
Confidence 44566666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-29 Score=283.61 Aligned_cols=314 Identities=18% Similarity=0.235 Sum_probs=235.6
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCCCC--ch---------------H-------HH------HHHHHHHHHHhh---
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGN--SH---------------S-------LW------EQIAGQISILGQ--- 281 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~--~~---------------~-------~~------r~i~~Li~lLk~--- 281 (1013)
||.+..+..+++.|.. +|++++..+.. .. . .| .....+...+..
T Consensus 21 g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (380)
T PRK15484 21 AAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLDPLPYSQRILNIAHKFTI 97 (380)
T ss_pred cHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccCchhHHHHHHHHHHhcCC
Confidence 7889999999998843 77777764311 00 0 00 001113333333
Q ss_pred cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcC
Q 001781 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1013)
Q Consensus 282 ~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S 361 (1013)
.++|+||+|+... +...+..+ . .+.|+|.+.|+.. .. ..+..++.+++++
T Consensus 98 ~~~~vi~v~~~~~-~~~~~~~~-~---------~~~~~v~~~h~~~-~~------------------~~~~~~~~ii~~S 147 (380)
T PRK15484 98 TKDSVIVIHNSMK-LYRQIRER-A---------PQAKLVMHMHNAF-EP------------------ELLDKNAKIIVPS 147 (380)
T ss_pred CCCcEEEEeCcHH-hHHHHHhh-C---------CCCCEEEEEeccc-Ch------------------hHhccCCEEEEcC
Confidence 5689999998543 23323321 1 4578999999751 10 1123567889988
Q ss_pred CCchhhhc-cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHH
Q 001781 362 YTLPMLYS-VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPL 440 (1013)
Q Consensus 362 ~~~~~ly~-~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~L 440 (1013)
...+..+. ..+..++.+|||+ +|. ..|.+.. ...++..++++++.++|+++||+.+ .||++.+++|+..+
T Consensus 148 ~~~~~~~~~~~~~~~i~vIpng-vd~---~~~~~~~-~~~~~~~~~~~~~~~~il~~Grl~~----~Kg~~~Li~A~~~l 218 (380)
T PRK15484 148 QFLKKFYEERLPNADISIVPNG-FCL---ETYQSNP-QPNLRQQLNISPDETVLLYAGRISP----DKGILLLMQAFEKL 218 (380)
T ss_pred HHHHHHHHhhCCCCCEEEecCC-CCH---HHcCCcc-hHHHHHHhCCCCCCeEEEEeccCcc----ccCHHHHHHHHHHH
Confidence 77766543 3456789999997 776 6675532 3456778898888899999999976 79999999999998
Q ss_pred HHHHhhcccCCCCeEEEEEEcCCCc-------ccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCC
Q 001781 441 LIKYARRNSVEGSFKFVFLCGNSTD-------GYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQV 511 (1013)
Q Consensus 441 l~~~~~lk~~gpdikFLVIvG~G~e-------~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~E 511 (1013)
.++. |+++ |+|+|+++. .|.+.+++++++++ + +|+|+|.. +++..+|+.||++|+||.++
T Consensus 219 ~~~~-------p~~~-lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~-~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~ 287 (380)
T PRK15484 219 ATAH-------SNLK-LVVVGDPTASSKGEKAAYQKKVLEAAKRIG--D-RCIMLGGQPPEKMHNYYPLADLVVVPSQVE 287 (380)
T ss_pred HHhC-------CCeE-EEEEeCCccccccchhHHHHHHHHHHHhcC--C-cEEEeCCCCHHHHHHHHHhCCEEEeCCCCc
Confidence 7654 6899 568898653 23456667777655 4 79999954 68999999999999999864
Q ss_pred CCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEE-EEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH-HHhh
Q 001781 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI-FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH-AKNM 589 (1013)
Q Consensus 512 EEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~-Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~-ae~f 589 (1013)
|+||++++||||||+|||+++.||++|++.++.+|+ ++++.|+++++++|.++++|+++ .+|++++++. .++|
T Consensus 288 -E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~----~~~~~~ar~~~~~~f 362 (380)
T PRK15484 288 -EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL----TQIAEQAKDFVFSKY 362 (380)
T ss_pred -cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH----HHHHHHHHHHHHHhC
Confidence 299999999999999999999999999999999999 56889999999999999999874 6799999985 5789
Q ss_pred cHHHHHHHHHHHHHHHh
Q 001781 590 LALDCVTRYARILENVL 606 (1013)
Q Consensus 590 s~e~~~~~y~~Lye~lL 606 (1013)
+|+.++++|.++|++..
T Consensus 363 sw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 363 SWEGVTQRFEEQIHNWF 379 (380)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998753
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=289.84 Aligned_cols=338 Identities=11% Similarity=0.120 Sum_probs=225.2
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCC-Cch---------------------HHH----------H
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG-NSH---------------------SLW----------E 270 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g-~~~---------------------~~~----------r 270 (1013)
+||++|...++.||.+.++++|++.|.+.||+|.++..... +.. ... .
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG 80 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchhhcc
Confidence 48999999999999999999999999999999999866432 110 000 1
Q ss_pred HHHHHHHHH-hhcCccEEEEcCcchHHHHH--HHHHHhhhhcccCCCCCCcEEEEEcCCccc-----------ccc----
Q 001781 271 QIAGQISIL-GQEQYSLIDWSIFDGIIADS--LEAKEAISSLMQEPFHSIPLVWIIQEDSLA-----------NRL---- 332 (1013)
Q Consensus 271 ~i~~Li~lL-k~~kpDIIh~~~~~~~lv~~--Laak~~~s~l~qep~~~IPVI~tvHg~~l~-----------~~l---- 332 (1013)
....+.+.+ +.++|||||.|.+++.++.. +...... +... ..++|+|||.|+.-.. .+.
T Consensus 81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~-~~~~--~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~ 157 (405)
T PRK10125 81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEK-VKNH--KPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQ 157 (405)
T ss_pred hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhh-hhcc--cCCCCEEEecccccccCCCcCCCcccccccccCC
Confidence 122245555 57899999999988754322 1110000 0000 1468999999994311 110
Q ss_pred -----chhhh---hhHHHHHH----HHHHHhccccEEEEcCCCchhhhc-cCCCCCEEEeCCCCCCcccccccCcchhHH
Q 001781 333 -----PVYVE---RGFQNLLS----YWKSVFSRVNVIVFPDYTLPMLYS-VLDAGNFFVIPGSPADVWAVEAYSKSHEKY 399 (1013)
Q Consensus 333 -----~~y~~---~~l~klLs----~~~~~l~~AD~VI~~S~~~~~ly~-~l~~~ki~VIPnggVDl~~~~~F~p~~~~~ 399 (1013)
..|+. ....+... .+...++.++.+|++|...+.... .+...++.+|||+ +|+ +.+.+.....
T Consensus 158 ~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NG-id~---~~~~~~~~~~ 233 (405)
T PRK10125 158 KCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNG-IDM---ATEAILAELP 233 (405)
T ss_pred CCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCC-cCc---cccccccccc
Confidence 00211 00111111 122234456788998887765533 2345789999996 886 3221111111
Q ss_pred HHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcC
Q 001781 400 QLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLG 479 (1013)
Q Consensus 400 ~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLg 479 (1013)
.. ..++++++|+++|+...+ + .||++.+++|+..+. ++++ |+|+|.++.. .
T Consensus 234 ~~----~~~~~~~~il~v~~~~~~-~-~Kg~~~li~A~~~l~----------~~~~-L~ivG~g~~~--~---------- 284 (405)
T PRK10125 234 PV----RETQGKPKIAVVAHDLRY-D-GKTDQQLVREMMALG----------DKIE-LHTFGKFSPF--T---------- 284 (405)
T ss_pred cc----ccCCCCCEEEEEEecccc-C-CccHHHHHHHHHhCC----------CCeE-EEEEcCCCcc--c----------
Confidence 11 123466789999985332 2 599999999998651 3678 6799987642 1
Q ss_pred CCCCcEEEcCC---cccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHH
Q 001781 480 LLEHSVRHYGF---NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPE 556 (1013)
Q Consensus 480 L~dg~V~FlG~---~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~e 556 (1013)
.+ +|.++|. ..++..+|+.||+||+||..| +||++++||||||+|||+|++||++|++.++ +|++++++|++
T Consensus 285 -~~-~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~E--gfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~ 359 (405)
T PRK10125 285 -AG-NVVNHGFETDKRKLMSALNQMDALVFSSRVD--NYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVL 359 (405)
T ss_pred -cc-ceEEecCcCCHHHHHHHHHhCCEEEECCccc--cCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHH
Confidence 12 6888874 356889999999999999987 9999999999999999999999999999875 99999999999
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHH-HHhhcHHHHHHHHHHHHHHH
Q 001781 557 GLSRAFSLFISNGKLSKFARTVASAGRLH-AKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 557 eLAeAI~~LL~d~elR~~~~~Mg~aARe~-ae~fs~e~~~~~y~~Lye~l 605 (1013)
+|++++...+.+.. ..++.+++++. .++|+++.++++|.++|+++
T Consensus 360 ~La~~~~~~~~~~~----~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 360 QLAQLSKPEIAQAV----FGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHHhccCHHHHHHh----hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99986432221110 11123456665 56799999999999999863
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=264.96 Aligned_cols=343 Identities=20% Similarity=0.268 Sum_probs=261.4
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCch-----------------------HHHHHHHHHHHH
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-----------------------SLWEQIAGQISI 278 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-----------------------~~~r~i~~Li~l 278 (1013)
||+++.....+ +|...++..+++.|.+.||+|.+++....... ........+...
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRL 80 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHH
Confidence 46777777655 68899999999999999999999987543210 111222335677
Q ss_pred HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
++..++|+||.+............+. .++|+|+++|+......... ...............++.+|.++
T Consensus 81 ~~~~~~Dii~~~~~~~~~~~~~~~~~----------~~~~~i~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~i 149 (374)
T cd03801 81 LRRERFDVVHAHDWLALLAAALAARL----------LGIPLVLTVHGLEFGRPGNE-LGLLLKLARALERRALRRADRII 149 (374)
T ss_pred hhhcCCcEEEEechhHHHHHHHHHHh----------cCCcEEEEeccchhhccccc-hhHHHHHHHHHHHHHHHhCCEEE
Confidence 77889999999877765544322221 46899999999643322110 00001111122234577899999
Q ss_pred EcCCCchhhhccC---CCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHH
Q 001781 359 FPDYTLPMLYSVL---DAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1013)
Q Consensus 359 ~~S~~~~~ly~~l---~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLe 435 (1013)
+.+......+... ...++.++|++ ++. ..+.+.. ...+.......+.++|+++|++.. .||++.+++
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~i~~~-~~~---~~~~~~~--~~~~~~~~~~~~~~~i~~~g~~~~----~k~~~~~i~ 219 (374)
T cd03801 150 AVSEATREELRELGGVPPEKITVIPNG-VDT---ERFRPAP--RAARRRLGIPEDEPVILFVGRLVP----RKGVDLLLE 219 (374)
T ss_pred EecHHHHHHHHhcCCCCCCcEEEecCc-ccc---cccCccc--hHHHhhcCCcCCCeEEEEecchhh----hcCHHHHHH
Confidence 9887776654322 22589999996 666 5554432 333445566677889999999865 799999999
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCCCC
Q 001781 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQ 513 (1013)
Q Consensus 436 Afa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~EEE 513 (1013)
++..+.+.. ++++ ++++|.+... ..++++++++++.+ +|.+.|.. +++..+|+.||++++|+..|
T Consensus 220 ~~~~~~~~~-------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~di~i~~~~~~-- 286 (374)
T cd03801 220 ALAKLRKEY-------PDVR-LVIVGDGPLR--EELEALAAELGLGD-RVTFLGFVPDEDLPALYAAADVFVLPSLYE-- 286 (374)
T ss_pred HHHHHhhhc-------CCeE-EEEEeCcHHH--HHHHHHHHHhCCCc-ceEEEeccChhhHHHHHHhcCEEEecchhc--
Confidence 999886543 5788 5688977654 88888888899987 99999966 88999999999999999997
Q ss_pred CccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HHHhhcHH
Q 001781 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL-HAKNMLAL 592 (1013)
Q Consensus 514 GFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe-~ae~fs~e 592 (1013)
++|++++|||++|+|||+++.++..|++.++.+|+++++.|+++++++|.+++++++. +.+|++++++ ..++++|+
T Consensus 287 ~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 287 GFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPEL---RRRLGEAARERVAERFSWD 363 (374)
T ss_pred cccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHH---HHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999999999999876 4889999995 77889999
Q ss_pred HHHHHHHHHHH
Q 001781 593 DCVTRYARILE 603 (1013)
Q Consensus 593 ~~~~~y~~Lye 603 (1013)
+.++.+.++|+
T Consensus 364 ~~~~~~~~~~~ 374 (374)
T cd03801 364 RVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHhhC
Confidence 99999988773
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=273.51 Aligned_cols=336 Identities=16% Similarity=0.175 Sum_probs=247.6
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHH
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEA 302 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laa 302 (1013)
++|+++......+|.+.....+++.|.+.||+|.+++.... .+...++..++|+||.|......+.....
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------~~~~~~~~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------ALISKIEIINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc----------hhhhChhcccCCEEEEEccccCccCHHHH
Confidence 47889988877799999999999999999999999987653 34456668899999997755443322222
Q ss_pred HHhhhhcccCCCCCCcEEEEEcCCcccccc--------------------chhhh-hhHHHHHHHHHHHh-ccccEEEEc
Q 001781 303 KEAISSLMQEPFHSIPLVWIIQEDSLANRL--------------------PVYVE-RGFQNLLSYWKSVF-SRVNVIVFP 360 (1013)
Q Consensus 303 k~~~s~l~qep~~~IPVI~tvHg~~l~~~l--------------------~~y~~-~~l~klLs~~~~~l-~~AD~VI~~ 360 (1013)
.... .++|+|+++|+....... ..+.. .............+ ..++.++++
T Consensus 71 ~~~~--------~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 142 (365)
T cd03825 71 SKLL--------DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAP 142 (365)
T ss_pred HHHH--------cCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEeh
Confidence 1111 358999999984211000 00000 00111112222223 345667777
Q ss_pred CCCchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHH
Q 001781 361 DYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1013)
Q Consensus 361 S~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAf 437 (1013)
+........ .++..++.++||+ +|. ..|.+. .....+..++++++..++++.|+... ...||++.+++++
T Consensus 143 s~~~~~~~~~~~~~~~~~~~vi~ng-i~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~K~~~~ll~a~ 215 (365)
T cd03825 143 SRWLADCARSSSLFKGIPIEVIPNG-IDT---TIFRPR-DKREARKRLGLPADKKIILFGAVGGT--DPRKGFDELIEAL 215 (365)
T ss_pred hHHHHHHHHhccccCCCceEEeCCC-Ccc---cccCCC-cHHHHHHHhCCCCCCeEEEEEecCCC--ccccCHHHHHHHH
Confidence 765544422 2556789999997 776 666443 24556778888888888877776532 1269999999999
Q ss_pred HHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcc---cHHHHHHHccEEEEccCCCCCC
Q 001781 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG---DVNGVLLMADIVLYGSSQVEQG 514 (1013)
Q Consensus 438 a~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~e---Dl~~lLaaADIfVlPS~~EEEG 514 (1013)
..+.++. .++++ ++++|.++.. .. .++.+ +|+++|..+ ++..+|+.||++++||..| +
T Consensus 216 ~~l~~~~------~~~~~-~~i~G~~~~~--~~-------~~~~~-~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e--~ 276 (365)
T cd03825 216 KRLAERW------KDDIE-LVVFGASDPE--IP-------PDLPF-PVHYLGSLNDDESLALIYSAADVFVVPSLQE--N 276 (365)
T ss_pred HHhhhcc------CCCeE-EEEeCCCchh--hh-------ccCCC-ceEecCCcCCHHHHHHHHHhCCEEEeccccc--c
Confidence 8875531 15788 5688987753 11 14555 899999654 6889999999999999987 9
Q ss_pred ccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-HhhcHHH
Q 001781 515 FPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLALD 593 (1013)
Q Consensus 515 FGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs~e~ 593 (1013)
||++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++++++. +.+|++++++.+ ++|+++.
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~ 353 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDE---REELGEAARELAENEFDSRV 353 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999998899999999999999999999998875 489999999976 5688899
Q ss_pred HHHHHHHHHHHH
Q 001781 594 CVTRYARILENV 605 (1013)
Q Consensus 594 ~~~~y~~Lye~l 605 (1013)
.+++|.++|+++
T Consensus 354 ~~~~~~~~y~~~ 365 (365)
T cd03825 354 QAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=265.75 Aligned_cols=321 Identities=18% Similarity=0.231 Sum_probs=244.8
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------------------HHHHHHHHHHHHHhhc
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------SLWEQIAGQISILGQE 282 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~---------------------~~~r~i~~Li~lLk~~ 282 (1013)
||+++++.+..+|.+.++..+++.|.+.||+|.+++....... ..+.....+...++..
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKE 80 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhc
Confidence 5889999998999999999999999999999999987433211 0112334477888889
Q ss_pred CccEEEEcCc-chHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcC
Q 001781 283 QYSLIDWSIF-DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1013)
Q Consensus 283 kpDIIh~~~~-~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S 361 (1013)
+||+|+++.. ...++..+..+ .++|+|+++|+............ . ......++.+|.+++.+
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~d~ii~~s 143 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-----------LGTKLIVWEHNSLSLELKRKLRL----L--LLIRKLYRRADKIVAVS 143 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-----------cCCceEEEEcCcchhhhccchhH----H--HHHHhhccccceEEEec
Confidence 9999999876 44343333331 14799999999643322211111 0 22345678899999988
Q ss_pred CCchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHH
Q 001781 362 YTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1013)
Q Consensus 362 ~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa 438 (1013)
......+. ..+..++.+||++ +|. ..+.+...... .++...+.++|+++||+.. .||++.+++++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vi~~~-~~~---~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~----~k~~~~~i~~~~ 212 (353)
T cd03811 144 EGVKEDLLKLLGIPPDKIEVIYNP-IDI---EEIRALAEEPL---ELGIPPDGPVILAVGRLSP----QKGFDTLIRAFA 212 (353)
T ss_pred cchhhhHHHhhcCCccccEEecCC-cCh---hhcCcccchhh---hcCCCCCceEEEEEecchh----hcChHHHHHHHH
Confidence 77665532 2235789999996 776 55543322211 3456678899999999865 799999999999
Q ss_pred HHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHH
Q 001781 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1013)
Q Consensus 439 ~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGiv 518 (1013)
.+.... ++++ ++++|.++.. +.++++++++++.+ +|.+.|..+++..+|+.||++++||..| ++|++
T Consensus 213 ~l~~~~-------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~d~~i~ps~~e--~~~~~ 279 (353)
T cd03811 213 LLRKEG-------PDAR-LVILGDGPLR--EELEALAKELGLAD-RVHFLGFQSNPYPYLKAADLFVLSSRYE--GFPNV 279 (353)
T ss_pred HhhhcC-------CCce-EEEEcCCccH--HHHHHHHHhcCCCc-cEEEecccCCHHHHHHhCCEEEeCcccC--CCCcH
Confidence 886542 5788 5688988865 88889999999987 9999999999999999999999999997 99999
Q ss_pred HHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHH---HHHHHHHHhCcccHHHHHHHHHHHHHHHHh
Q 001781 519 IVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGL---SRAFSLFISNGKLSKFARTVASAGRLHAKN 588 (1013)
Q Consensus 519 VLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeL---AeAI~~LL~d~elR~~~~~Mg~aARe~ae~ 588 (1013)
++|||++|+|||+++.|+..|++.++.+|++++++|++++ +++|..+.++++. +++|++++++.+.+
T Consensus 280 ~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 349 (353)
T cd03811 280 LLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPEL---RERLAAAARERVAR 349 (353)
T ss_pred HHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHH---HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 6666666666654 58888866764443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-28 Score=264.84 Aligned_cols=330 Identities=19% Similarity=0.243 Sum_probs=244.0
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc-------------------hHH---HHHHHHHHHHHhh
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-------------------HSL---WEQIAGQISILGQ 281 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~-------------------~~~---~r~i~~Li~lLk~ 281 (1013)
+|++++.. .+|.+.++..+++.|.+.||+|.+++...... ... +..+..+.+.+++
T Consensus 1 kIl~i~~~--~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (359)
T cd03808 1 KILHIVTV--DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRRGINPFKDLKALLRLYRLLRK 78 (359)
T ss_pred CeeEEEec--chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEeccccccccChHhHHHHHHHHHHHHHh
Confidence 46777777 67778889999999999999999997654321 001 1223346677888
Q ss_pred cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcC
Q 001781 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1013)
Q Consensus 282 ~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S 361 (1013)
.+||+||++.....++..+..+.. ...++++..|+.......... .......+ .+..++.+|.+++.+
T Consensus 79 ~~~dvv~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~d~ii~~s 146 (359)
T cd03808 79 ERPDIVHTHTPKPGILGRLAARLA---------GVPKVIYTVHGLGFVFTSGGL-KRRLYLLL--ERLALRFTDKVIFQN 146 (359)
T ss_pred cCCCEEEEccccchhHHHHHHHHc---------CCCCEEEEecCcchhhccchh-HHHHHHHH--HHHHHhhccEEEEcC
Confidence 999999998766665555555422 346788888885433222111 11111111 233566789999988
Q ss_pred CCchhhhccC---C-CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHH
Q 001781 362 YTLPMLYSVL---D-AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1013)
Q Consensus 362 ~~~~~ly~~l---~-~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAf 437 (1013)
......+... + ..++.+++++ +|. ..+.+.... .+.+.++|+++|++.+ .||++.+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~--------~~~~~~~i~~~G~~~~----~k~~~~li~~~ 210 (359)
T cd03808 147 EDDRDLALKLGIIKKKKTVLIPGSG-VDL---DRFSPSPEP--------IPEDDPVFLFVARLLK----DKGIDELLEAA 210 (359)
T ss_pred HHHHHHHHHhcCCCcCceEEecCCC-CCh---hhcCccccc--------cCCCCcEEEEEecccc----ccCHHHHHHHH
Confidence 7766553322 1 2344555554 776 444332211 2456789999999866 79999999999
Q ss_pred HHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHH-HHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCcc
Q 001781 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE-VASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 438 a~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lke-la~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
..+.++. ++++ ++++|.++.. ...+. ++.+++..+ +|+|.|..+++..+|+.||++++||..| +||
T Consensus 211 ~~l~~~~-------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adi~i~ps~~e--~~~ 277 (359)
T cd03808 211 RILKAKG-------PNVR-LLLVGDGDEE--NPAAILEIEKLGLEG-RVEFLGFRDDVPELLAAADVFVLPSYRE--GLP 277 (359)
T ss_pred HHHHhcC-------CCeE-EEEEcCCCcc--hhhHHHHHHhcCCcc-eEEEeeccccHHHHHHhccEEEecCccc--Ccc
Confidence 8885532 6899 5688988765 33333 366777776 8999999999999999999999999997 999
Q ss_pred HHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH-HHhhcHHHHH
Q 001781 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLH-AKNMLALDCV 595 (1013)
Q Consensus 517 ivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~-ae~fs~e~~~ 595 (1013)
++++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.+++.+++. +.+|++++++. .++|+++..+
T Consensus 278 ~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~~~~~ 354 (359)
T cd03808 278 RVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPEL---RARMGQAARKRAEEEFDEEIVV 354 (359)
T ss_pred hHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 48999999997 6788888888
Q ss_pred HHHH
Q 001781 596 TRYA 599 (1013)
Q Consensus 596 ~~y~ 599 (1013)
+.|.
T Consensus 355 ~~~~ 358 (359)
T cd03808 355 KKLL 358 (359)
T ss_pred HHhh
Confidence 7764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=269.71 Aligned_cols=305 Identities=15% Similarity=0.106 Sum_probs=229.7
Q ss_pred CEEEEEeccc------CCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch--------------------HHHHHHHHHH
Q 001781 223 PRIGLILGNM------AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------SLWEQIAGQI 276 (1013)
Q Consensus 223 ~RIalI~g~l------~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~--------------------~~~r~i~~Li 276 (1013)
+||++|...+ ..||.+.++.++++.|.+.||+|.+++....... ..+.....+.
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE 80 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence 4789998877 5588899999999999999999999987543210 0123334466
Q ss_pred HHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccE
Q 001781 277 SILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1013)
Q Consensus 277 ~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~ 356 (1013)
+++++.++|+||++....... ..+. .++|+|+++|+........ ........+.
T Consensus 81 ~~~~~~~~Divh~~~~~~~~~---~~~~----------~~~~~v~~~h~~~~~~~~~-------------~~~~~~~~~~ 134 (335)
T cd03802 81 RALAAGDFDIVHNHSLHLPLP---FARP----------LPVPVVTTLHGPPDPELLK-------------LYYAARPDVP 134 (335)
T ss_pred HHHhcCCCCEEEecCcccchh---hhcc----------cCCCEEEEecCCCCcccch-------------HHHhhCcCCe
Confidence 788889999999988766554 2211 4689999999975432210 1123445677
Q ss_pred EEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 357 VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
+++.+.......... .++.+|||+ +|. +.|.+. +.++..|+++||+.+ .||++.++++
T Consensus 135 ~~~~s~~~~~~~~~~--~~~~vi~ng-vd~---~~~~~~------------~~~~~~i~~~Gr~~~----~Kg~~~li~~ 192 (335)
T cd03802 135 FVSISDAQRRPWPPL--PWVATVHNG-IDL---DDYPFR------------GPKGDYLLFLGRISP----EKGPHLAIRA 192 (335)
T ss_pred EEEecHHHHhhcccc--cccEEecCC-cCh---hhCCCC------------CCCCCEEEEEEeecc----ccCHHHHHHH
Confidence 788777665554333 789999997 776 666431 234568999999865 7999999998
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcC-CCCCcEEEcCCc--ccHHHHHHHccEEEEccCCCCC
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLG-LLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQ 513 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLg-L~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~EEE 513 (1013)
+.. .+++ ++++|.++.. +.+...+++.. +.+ +|+|+|.. +++..+|+.+|++|+||... |
T Consensus 193 ~~~------------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~~~-~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~-E 255 (335)
T cd03802 193 ARR------------AGIP-LKLAGPVSDP--DYFYREIAPELLDGP-DIEYLGEVGGAEKAELLGNARALLFPILWE-E 255 (335)
T ss_pred HHh------------cCCe-EEEEeCCCCH--HHHHHHHHHhcccCC-cEEEeCCCCHHHHHHHHHhCcEEEeCCccc-C
Confidence 643 2678 5689998764 55665555544 555 89999964 56789999999999999863 2
Q ss_pred CccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HHHhhcHH
Q 001781 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL-HAKNMLAL 592 (1013)
Q Consensus 514 GFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe-~ae~fs~e 592 (1013)
+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.++++.+. +++++ ..++|+++
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~---------~~~~~~~~~~~s~~ 324 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDR---------AACRRRAERRFSAA 324 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHH---------HHHHHHHHHhCCHH
Confidence 999999999999999999999999999999999999985 9999999999865432 23444 45789999
Q ss_pred HHHHHHHHHHH
Q 001781 593 DCVTRYARILE 603 (1013)
Q Consensus 593 ~~~~~y~~Lye 603 (1013)
.++++|.++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-28 Score=262.22 Aligned_cols=337 Identities=20% Similarity=0.259 Sum_probs=256.0
Q ss_pred EEEEecccCC---CCceehHHHHHHHHHHCCCEEEEEEcCCCCch-----------------------------HHHHHH
Q 001781 225 IGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-----------------------------SLWEQI 272 (1013)
Q Consensus 225 IalI~g~l~~---gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-----------------------------~~~r~i 272 (1013)
|+++...... +|.+.++..+++.|.+.||+|.+++....... ..+...
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAA 80 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHH
Confidence 3556666554 78889999999999999999999987432111 011223
Q ss_pred HHHHHHHh--hcCccEEEEcCcchHH-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHH
Q 001781 273 AGQISILG--QEQYSLIDWSIFDGII-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349 (1013)
Q Consensus 273 ~~Li~lLk--~~kpDIIh~~~~~~~l-v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~ 349 (1013)
..+...++ ..++|+||++...... +.....+. .++|+++++|+.......... ........
T Consensus 81 ~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~----------~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~ 144 (377)
T cd03798 81 RALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRK----------LGIPLVVTLHGSDVNLLPRKR------LLRALLRR 144 (377)
T ss_pred HHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHh----------cCCCEEEEeecchhcccCchh------hHHHHHHH
Confidence 34667787 8999999987443322 22222222 357999999996544322111 11122334
Q ss_pred HhccccEEEEcCCCchhhhcc--CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccc
Q 001781 350 VFSRVNVIVFPDYTLPMLYSV--LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELS 427 (1013)
Q Consensus 350 ~l~~AD~VI~~S~~~~~ly~~--l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~ 427 (1013)
.++.+|.+++.+......+.. .+..++.++|++ +|. ..+.+...... ...+...+.++|+++|++.+ .
T Consensus 145 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~-~~~---~~~~~~~~~~~--~~~~~~~~~~~i~~~g~~~~----~ 214 (377)
T cd03798 145 ALRRADAVIAVSEALADELKALGIDPEKVTVIPNG-VDT---ERFSPADRAEA--RKLGLPEDKKVILFVGRLVP----R 214 (377)
T ss_pred HHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCC-cCc---ccCCCcchHHH--HhccCCCCceEEEEeccCcc----c
Confidence 578899999999877766544 377899999997 666 55654332222 44556667889999999866 7
Q ss_pred cCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEE
Q 001781 428 WDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVL 505 (1013)
Q Consensus 428 Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfV 505 (1013)
||++.+++++..+.++. ++++ ++++|.++.. +.++++++.+++.+ +|.+.|.. +++..+|+.||+++
T Consensus 215 k~~~~li~~~~~~~~~~-------~~~~-l~i~g~~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 215 KGIDYLIEALARLLKKR-------PDVH-LVIVGDGPLR--EALEALAAELGLED-RVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred cCHHHHHHHHHHHHhcC-------CCeE-EEEEcCCcch--HHHHHHHHhcCCcc-eEEEeCCCCHHHHHHHHHhcCeee
Confidence 99999999998886542 5788 5689988865 78888999899887 99999955 67899999999999
Q ss_pred EccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Q 001781 506 YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL- 584 (1013)
Q Consensus 506 lPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe- 584 (1013)
+||..| ++|++++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.+++++++. +++.++++
T Consensus 284 ~~~~~~--~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-----~~~~~~~~~ 356 (377)
T cd03798 284 LPSLRE--GFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL-----RLGRAARRR 356 (377)
T ss_pred cchhhc--cCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH-----HHhHHHHHH
Confidence 999997 9999999999999999999999999999999999999999999999999999998762 56666666
Q ss_pred HHHhhcHHHHHHHHHHHHHHH
Q 001781 585 HAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 585 ~ae~fs~e~~~~~y~~Lye~l 605 (1013)
..++|+|+..++.+.++|+++
T Consensus 357 ~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 357 VAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHhhHHHHHHHHHHHHhhC
Confidence 667888899999999988753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=292.90 Aligned_cols=282 Identities=19% Similarity=0.235 Sum_probs=217.7
Q ss_pred cCccEEEEcCcc-hHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccc---------cchhhhhhHHHHHHHH-HHH
Q 001781 282 EQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANR---------LPVYVERGFQNLLSYW-KSV 350 (1013)
Q Consensus 282 ~kpDIIh~~~~~-~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~---------l~~y~~~~l~klLs~~-~~~ 350 (1013)
.++|+||++... +.+++.++++. .++|+|++.|+.....+ ........+.+++... ...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~----------~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 241 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKAR----------RGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLA 241 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHH----------hCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 578999998643 23344444433 46899999999422111 0000000111112222 335
Q ss_pred hccccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCcccc
Q 001781 351 FSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSW 428 (1013)
Q Consensus 351 l~~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~K 428 (1013)
++.||.|++.+...... ..+.+.+++.+|||+ +|. +.|.+.... ....+.++|+++||+.+ .|
T Consensus 242 ~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpNg-id~---~~f~~~~~~-------~~~~~~~~i~~vGrl~~----~K 306 (475)
T cd03813 242 YQAADRITTLYEGNRERQIEDGADPEKIRVIPNG-IDP---ERFAPARRA-------RPEKEPPVVGLIGRVVP----IK 306 (475)
T ss_pred HHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCCC-cCH---HHcCCcccc-------ccCCCCcEEEEEecccc----cc
Confidence 78899999988765544 235567789999997 776 666543211 23456789999999976 79
Q ss_pred CHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCC--cccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEE
Q 001781 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST--DGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLY 506 (1013)
Q Consensus 429 g~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~--e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVl 506 (1013)
|++.+++|++.+.++. |+++ ++|+|.++ ..|.++++++++++++.+ +|+|+| .+++..+|+.+|++|+
T Consensus 307 g~~~li~a~~~l~~~~-------p~~~-l~IvG~g~~~~~~~~e~~~li~~l~l~~-~V~f~G-~~~v~~~l~~aDv~vl 376 (475)
T cd03813 307 DIKTFIRAAAIVRKKI-------PDAE-GWVIGPTDEDPEYAEECRELVESLGLED-NVKFTG-FQNVKEYLPKLDVLVL 376 (475)
T ss_pred CHHHHHHHHHHHHHhC-------CCeE-EEEECCCCcChHHHHHHHHHHHHhCCCC-eEEEcC-CccHHHHHHhCCEEEe
Confidence 9999999999887653 6899 56889874 346788899999999987 999999 7789999999999999
Q ss_pred ccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc------CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001781 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE------GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVAS 580 (1013)
Q Consensus 507 PS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d------G~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~ 580 (1013)
||..| +||++++||||||+|||+|++|+++|++.+ |.+|+++++.|+++++++|.++++|++. +++|++
T Consensus 377 pS~~E--g~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~---~~~~~~ 451 (475)
T cd03813 377 TSISE--GQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPEL---RRAMGE 451 (475)
T ss_pred Cchhh--cCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHH---HHHHHH
Confidence 99988 999999999999999999999999999998 6699999999999999999999999876 489999
Q ss_pred HHHHHHHh-hcHHHHHHHHHHHHH
Q 001781 581 AGRLHAKN-MLALDCVTRYARILE 603 (1013)
Q Consensus 581 aARe~ae~-fs~e~~~~~y~~Lye 603 (1013)
++++.+++ |+++.++++|.++|+
T Consensus 452 ~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 452 AGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99997766 566888899999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-28 Score=267.85 Aligned_cols=331 Identities=13% Similarity=0.105 Sum_probs=230.8
Q ss_pred EEEEEecccC---CCCceehHHHHHHHHHHCCCEEEEEEcCCCCch-------------------HH---HHHHHHHHHH
Q 001781 224 RIGLILGNMA---KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------SL---WEQIAGQISI 278 (1013)
Q Consensus 224 RIalI~g~l~---~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-------------------~~---~r~i~~Li~l 278 (1013)
||++|..... .||.+.++.++++.|.+.||+|.+++....... .. ...+..+...
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIPAPEIGGLGTIIYDILAILHA 80 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcccccCCceEEEcCCCCccchhhhHHHHHHHHHH
Confidence 4677755432 288999999999999999999999987532211 00 0011112222
Q ss_pred H-hhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEE
Q 001781 279 L-GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 279 L-k~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~V 357 (1013)
+ ...++|+||...+.......+..+ .++|+|+++|+..+...........+.+... ...++.+|.+
T Consensus 81 ~~~~~~~~~i~~~~~~~~~~~~~~~~-----------~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~--~~~~~~ad~i 147 (363)
T cd04955 81 LFVKRDIDHVHALGPAIAPFLPLLRL-----------KGKKVVVNMDGLEWKRAKWGRPAKRYLKFGE--KLAVKFADRL 147 (363)
T ss_pred HhccCCeEEEEecCccHHHHHHHHHh-----------cCCCEEEEccCcceeecccccchhHHHHHHH--HHHHhhccEE
Confidence 2 234556666655443222222221 3589999999864432110011111111111 2346779999
Q ss_pred EEcCCCchhhh-ccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 358 VFPDYTLPMLY-SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 358 I~~S~~~~~ly-~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
++.+......+ ...+... .+|||+ +|. ..+.+ ....+..++++++. .|+++||+.+ .||++.+++|
T Consensus 148 i~~s~~~~~~~~~~~~~~~-~~i~ng-v~~---~~~~~---~~~~~~~~~~~~~~-~i~~~G~~~~----~Kg~~~li~a 214 (363)
T cd04955 148 IADSPGIKEYLKEKYGRDS-TYIPYG-ADH---VVSSE---EDEILKKYGLEPGR-YYLLVGRIVP----ENNIDDLIEA 214 (363)
T ss_pred EeCCHHHHHHHHHhcCCCC-eeeCCC-cCh---hhcch---hhhhHHhcCCCCCc-EEEEEecccc----cCCHHHHHHH
Confidence 99988776654 2333333 899996 776 44433 22344556666554 6789999866 7999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHH-HcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCC-CC
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS-RLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQ-VE 512 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~-eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~-EE 512 (1013)
++.+. ++++ ++++|.++.. ..+++.++ ++++.+ +|+|+|.. +++..+|+.||++++||.. |
T Consensus 215 ~~~l~----------~~~~-l~ivG~~~~~--~~~~~~~~~~~~~~~-~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e- 279 (363)
T cd04955 215 FSKSN----------SGKK-LVIVGNADHN--TPYGKLLKEKAAADP-RIIFVGPIYDQELLELLRYAALFYLHGHSVG- 279 (363)
T ss_pred HHhhc----------cCce-EEEEcCCCCc--chHHHHHHHHhCCCC-cEEEccccChHHHHHHHHhCCEEEeCCccCC-
Confidence 98762 2578 5689987654 44544444 677876 99999954 6788999999999999998 6
Q ss_pred CCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH-hhcH
Q 001781 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK-NMLA 591 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae-~fs~ 591 (1013)
+||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|.+++++++. +.+|++++++.++ +|+|
T Consensus 280 -~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~---~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 280 -GTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEE---VSAMAKAARERIREKYTW 351 (363)
T ss_pred -CCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHH---HHHHHHHHHHHHHHhCCH
Confidence 999999999999999999999999999986 7899987765 99999999999876 4889999999765 5999
Q ss_pred HHHHHHHHHHHH
Q 001781 592 LDCVTRYARILE 603 (1013)
Q Consensus 592 e~~~~~y~~Lye 603 (1013)
+.++++|.++|+
T Consensus 352 ~~~~~~~~~~y~ 363 (363)
T cd04955 352 EKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-28 Score=296.22 Aligned_cols=289 Identities=14% Similarity=0.106 Sum_probs=210.6
Q ss_pred cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccc--hh-----hhhhHHHHHHHHHHHhccc
Q 001781 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP--VY-----VERGFQNLLSYWKSVFSRV 354 (1013)
Q Consensus 282 ~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~--~y-----~~~~l~klLs~~~~~l~~A 354 (1013)
.+||+||+|.+.+.+++.+++... ++|+|.|.|.....+... .+ +.......+..-...++.|
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~l----------gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~A 476 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKL----------GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHA 476 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHh----------CCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhh
Confidence 469999999999999998888665 599999999633211110 00 0000011111122356788
Q ss_pred cEEEEcCCCchh-------hh---------------ccC--CCCCEEEeCCCCCCcccccccCcchhH-H----------
Q 001781 355 NVIVFPDYTLPM-------LY---------------SVL--DAGNFFVIPGSPADVWAVEAYSKSHEK-Y---------- 399 (1013)
Q Consensus 355 D~VI~~S~~~~~-------ly---------------~~l--~~~ki~VIPnggVDl~~~~~F~p~~~~-~---------- 399 (1013)
|.||+.+..+.. .| .++ ...++.+||++ +|. ..|.|-... .
T Consensus 477 d~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppG-vD~---~~F~P~~~~~~rl~~l~n~I~ 552 (815)
T PLN00142 477 DFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADM---SIYFPYTEKQKRLTSLHPSIE 552 (815)
T ss_pred hHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCC-CCh---hhcCCCChHHhhHHhhcccch
Confidence 998887754432 11 122 24488999986 887 766542211 1
Q ss_pred -------HHHHHcCC--CCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc-----
Q 001781 400 -------QLRKENGF--LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD----- 465 (1013)
Q Consensus 400 -------~~R~~lgi--~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e----- 465 (1013)
..++.+|+ .+++++|+++||+.+ .||++.+++|+..+.+.. ++++ |+|+|.+.+
T Consensus 553 ~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~----~KGid~LIeA~a~l~~l~-------~~~~-LVIVGgg~d~~~s~ 620 (815)
T PLN00142 553 ELLYSPEQNDEHIGYLKDRKKPIIFSMARLDR----VKNLTGLVEWYGKNKRLR-------ELVN-LVVVGGFIDPSKSK 620 (815)
T ss_pred hhcCChHHHHHHhCCccCCCCcEEEEEecCcc----cCCHHHHHHHHHHHHHhC-------CCcE-EEEEECCccccccc
Confidence 12345665 456779999999977 899999999998774432 4688 567776521
Q ss_pred -c----cHHHHHHHHHHcCCCCCcEEEcCCc------ccHHHHHH-HccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC
Q 001781 466 -G----YNDALQEVASRLGLLEHSVRHYGFN------GDVNGVLL-MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1013)
Q Consensus 466 -~----Y~e~Lkela~eLgL~dg~V~FlG~~------eDl~~lLa-aADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd 533 (1013)
. +.+.++++++++++.+ +|+|+|.. .++..+++ ++|+||+||.+| +||++++||||||+|||+|+
T Consensus 621 d~ee~~el~~L~~La~~lgL~~-~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~E--gFGLvvLEAMA~GlPVVATd 697 (815)
T PLN00142 621 DREEIAEIKKMHSLIEKYNLKG-QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATC 697 (815)
T ss_pred cHHHHHHHHHHHHHHHHcCCCC-cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCccc--CCCHHHHHHHHcCCCEEEcC
Confidence 0 1134778899999997 99999843 24555566 479999999998 99999999999999999999
Q ss_pred CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHH----hCcccHHHHHHHHHHHHHHH-HhhcHHHHHHHHHHHH
Q 001781 534 FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI----SNGKLSKFARTVASAGRLHA-KNMLALDCVTRYARIL 602 (1013)
Q Consensus 534 vgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL----~d~elR~~~~~Mg~aARe~a-e~fs~e~~~~~y~~Ly 602 (1013)
+||++|+|.+|.+|+++++.|+++++++|.+++ +|++. +++|+++|++.+ ++|+|+..++++.++.
T Consensus 698 vGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~l---r~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 698 QGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSY---WNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred CCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999999999998755 57766 499999999966 7899999999888765
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-28 Score=266.95 Aligned_cols=325 Identities=17% Similarity=0.181 Sum_probs=236.0
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHH--------------------HHHHHH-HHHh
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWE--------------------QIAGQI-SILG 280 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r--------------------~i~~Li-~lLk 280 (1013)
||++|...+.+ ||.+.+..++++.|.+.||+|.+++........... ...... ..+.
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPSFFKQLKKL 80 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecccccccccccHHHHHHHHhc
Confidence 47778777765 788999999999999999999999875432221000 000011 1145
Q ss_pred hcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEc
Q 001781 281 QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1013)
Q Consensus 281 ~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~ 360 (1013)
..++|+||++............ .. .++|+|++.|+....... .....+.+. ...++.+|.+++.
T Consensus 81 ~~~~Dii~~~~~~~~~~~~~~~-~~---------~~~~~i~~~h~~~~~~~~----~~~~~~~~~--~~~~~~~d~vi~~ 144 (357)
T cd03795 81 AKKADVIHLHFPNPLADLALLL-LP---------RKKPVVVHWHSDIVKQKL----LLKLYRPLQ--RRFLRRADAIVAT 144 (357)
T ss_pred CCCCCEEEEecCcchHHHHHHH-hc---------cCceEEEEEcChhhccch----hhhhhhHHH--HHHHHhcCEEEeC
Confidence 6899999997654432221111 11 357899999986433221 111111111 2356789999998
Q ss_pred CCCchhhhc--cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHH
Q 001781 361 DYTLPMLYS--VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1013)
Q Consensus 361 S~~~~~ly~--~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa 438 (1013)
+........ .....++.+||++ +|. ..+.+...... .....+.+.++|+++||+.+ .||++.+++|+.
T Consensus 145 s~~~~~~~~~~~~~~~~~~~i~~g-i~~---~~~~~~~~~~~--~~~~~~~~~~~i~~~G~~~~----~K~~~~li~a~~ 214 (357)
T cd03795 145 SPNYAETSPVLRRFRDKVRVIPLG-LDP---ARYPRPDALEE--AIWRRAAGRPFFLFVGRLVY----YKGLDVLLEAAA 214 (357)
T ss_pred cHHHHHHHHHhcCCccceEEecCC-CCh---hhcCCcchhhh--HhhcCCCCCcEEEEeccccc----ccCHHHHHHHHH
Confidence 877655321 1223688999997 776 55544322111 22344567789999999866 799999999998
Q ss_pred HHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCCCCCcc
Q 001781 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 439 ~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
++. +++ ++++|.++.. ..++++++++++.+ +|+|+|.. +++..+|+.||++++||....|+||
T Consensus 215 ~l~-----------~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g 279 (357)
T cd03795 215 ALP-----------DAP-LVIVGEGPLE--AELEALAAALGLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFG 279 (357)
T ss_pred hcc-----------CcE-EEEEeCChhH--HHHHHHHHhcCCcc-eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccc
Confidence 772 577 5689998865 88899998899987 99999955 5689999999999999975334999
Q ss_pred HHHHHHHHhCCCEEEcCCCCchhhhcc-CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHH
Q 001781 517 SLIVRAMTFGIPVITPDFPIIKEYVAE-GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL 592 (1013)
Q Consensus 517 ivVLEAMA~G~PVIASdvgGi~EiI~d-G~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e 592 (1013)
++++|||+||+|||+++.++..+.+.+ +.+|++++++|+++++++|.+++++++. +++|++++++.++++++.
T Consensus 280 ~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 280 IVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPEL---RERLGEAARERAEEEFTA 353 (357)
T ss_pred hHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHhcch
Confidence 999999999999999999999999886 8999999999999999999999999976 499999999977654443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=268.88 Aligned_cols=334 Identities=17% Similarity=0.140 Sum_probs=247.2
Q ss_pred EEEEEecccCC---CCceehHHHHHHHHHHCCCEEEEEEcCCCCch----------------------HHHHHHHHHHHH
Q 001781 224 RIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------------SLWEQIAGQISI 278 (1013)
Q Consensus 224 RIalI~g~l~~---gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~----------------------~~~r~i~~Li~l 278 (1013)
+|++++..+.+ +|.+.++.++++.|.+.|++|.+++....... ............
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL 80 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence 46777777766 89999999999999999999999977543211 011112224445
Q ss_pred HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
+...++|+||++....... + . .++|+|+++|+.........................++.+|.++
T Consensus 81 ~~~~~~Dii~~~~~~~~~~-----~-~---------~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 145 (365)
T cd03809 81 LLLLGLDLLHSPHNTAPLL-----R-L---------RGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAII 145 (365)
T ss_pred hhhcCCCeeeecccccCcc-----c-C---------CCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEE
Confidence 5568899999977655444 1 1 56899999998532211111111111112222344678899999
Q ss_pred EcCCCchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHH
Q 001781 359 FPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435 (1013)
Q Consensus 359 ~~S~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLe 435 (1013)
+.+......+. ..+..++.++|++ +|. ..+.+..... +.......+.++|+++|++.+ .||++.+++
T Consensus 146 ~~s~~~~~~~~~~~~~~~~~~~vi~~~-~~~---~~~~~~~~~~--~~~~~~~~~~~~i~~~G~~~~----~K~~~~~l~ 215 (365)
T cd03809 146 TVSEATKRDLLRYLGVPPDKIVVIPLG-VDP---RFRPPPAEAE--VLRALYLLPRPYFLYVGTIEP----RKNLERLLE 215 (365)
T ss_pred EccHHHHHHHHHHhCcCHHHEEeeccc-cCc---cccCCCchHH--HHHHhcCCCCCeEEEeCCCcc----ccCHHHHHH
Confidence 99877665432 3346789999997 776 5554432222 444455667789999999866 799999999
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCCCC
Q 001781 436 DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQVEQ 513 (1013)
Q Consensus 436 Afa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~EEE 513 (1013)
++..+.+.. ++++ ++++|.+...+ ....+.++++++.+ +|+++|.. +++..+|+.||++++||..|
T Consensus 216 ~~~~~~~~~-------~~~~-l~i~G~~~~~~-~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e-- 283 (365)
T cd03809 216 AFARLPAKG-------PDPK-LVIVGKRGWLN-EELLARLRELGLGD-RVRFLGYVSDEELAALYRGARAFVFPSLYE-- 283 (365)
T ss_pred HHHHHHHhc-------CCCC-EEEecCCcccc-HHHHHHHHHcCCCC-eEEECCCCChhHHHHHHhhhhhhcccchhc--
Confidence 999886653 4677 56888766542 33333346788887 99999955 77899999999999999998
Q ss_pred CccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHH
Q 001781 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALD 593 (1013)
Q Consensus 514 GFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~ 593 (1013)
++|++++|||++|+|||+++.|+..|++. .+|++++++|+++++++|.++++|++. +.+|++++++.+++|+|++
T Consensus 284 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 284 GFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPAL---REELRERGLARAKRFSWEK 358 (365)
T ss_pred cCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999999986 469999999999999999999999876 4899999999999999999
Q ss_pred HHHHHH
Q 001781 594 CVTRYA 599 (1013)
Q Consensus 594 ~~~~y~ 599 (1013)
.+++|.
T Consensus 359 ~~~~~~ 364 (365)
T cd03809 359 TARRTL 364 (365)
T ss_pred HHHHHh
Confidence 998775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=259.52 Aligned_cols=339 Identities=17% Similarity=0.168 Sum_probs=246.5
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCchH----------------------------------
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS---------------------------------- 267 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~---------------------------------- 267 (1013)
||++|...+.+ +|.+..+..+++.|.+.||+|.+++........
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKRLL 80 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHHHH
Confidence 57888888777 788999999999999999999999763211000
Q ss_pred -HHHHHHHHHHHH--hhcCccEEEEcCcchH-H-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc----ccchhhhh
Q 001781 268 -LWEQIAGQISIL--GQEQYSLIDWSIFDGI-I-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN----RLPVYVER 338 (1013)
Q Consensus 268 -~~r~i~~Li~lL--k~~kpDIIh~~~~~~~-l-v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~----~l~~y~~~ 338 (1013)
.+.........+ +..+||+|+++..... . ......+ . .++|+|+++|+..... .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~-~---------~~~~~i~~~h~~~~~~~~~~~~~~~~~- 149 (394)
T cd03794 81 NYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLAR-L---------KGAPFVLEVRDLWPESAVALGLLKNGS- 149 (394)
T ss_pred hhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHH-h---------cCCCEEEEehhhcchhHHHccCccccc-
Confidence 000011122233 3788999999863222 1 2222221 1 3689999999842110 0000000
Q ss_pred hHHHHHHHH-HHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEE
Q 001781 339 GFQNLLSYW-KSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVV 415 (1013)
Q Consensus 339 ~l~klLs~~-~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL 415 (1013)
...+..... +..++.+|.+++.+......+ ...+..++.++|++ ++. ..+.+...... +.......+.++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~-~~~---~~~~~~~~~~~-~~~~~~~~~~~~i~ 224 (394)
T cd03794 150 LLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNG-VDL---ELFKPPPADES-LRKELGLDDKFVVL 224 (394)
T ss_pred hHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCC-CCH---HHcCCccchhh-hhhccCCCCcEEEE
Confidence 000111111 335788999999988777665 46677889999997 665 55543322222 44455667788999
Q ss_pred EEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--cc
Q 001781 416 VVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GD 493 (1013)
Q Consensus 416 ~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eD 493 (1013)
++|++.. .||++.+++++..+.+. ++++ ++++|.++.. +.+++++...+++ +|.+.|.. ++
T Consensus 225 ~~G~~~~----~k~~~~l~~~~~~l~~~--------~~~~-l~i~G~~~~~--~~~~~~~~~~~~~--~v~~~g~~~~~~ 287 (394)
T cd03794 225 YAGNIGR----AQGLDTLLEAAALLKDR--------PDIR-FLIVGDGPEK--EELKELAKALGLD--NVTFLGRVPKEE 287 (394)
T ss_pred EecCccc----ccCHHHHHHHHHHHhhc--------CCeE-EEEeCCcccH--HHHHHHHHHcCCC--cEEEeCCCChHH
Confidence 9999865 79999999999887543 4788 5789998865 7888877777776 79999944 68
Q ss_pred HHHHHHHccEEEEccCCCC---CCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001781 494 VNGVLLMADIVLYGSSQVE---QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 494 l~~lLaaADIfVlPS~~EE---EGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~e 570 (1013)
+..+|+.||++++||..|+ .++|++++|||+||+|||+++.++..+++.++.+|++++++|+++++++|.++++|++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPE 367 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChH
Confidence 9999999999999999871 2358899999999999999999999999999889999999999999999999998887
Q ss_pred cHHHHHHHHHHHHHHHH-hhcHHHHHHHH
Q 001781 571 LSKFARTVASAGRLHAK-NMLALDCVTRY 598 (1013)
Q Consensus 571 lR~~~~~Mg~aARe~ae-~fs~e~~~~~y 598 (1013)
. +++|++++++.++ +|+|+.++++|
T Consensus 368 ~---~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 368 E---RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred H---HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 6 4899999999777 88888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=276.61 Aligned_cols=334 Identities=14% Similarity=0.069 Sum_probs=233.3
Q ss_pred EEEEEecccCCC-CceehHHHHHHHHHHC--CCEEEEEEcCCCCch-HHH------------------------------
Q 001781 224 RIGLILGNMAKD-SRSLLLITVVKNLQKL--GYVFKIYAVRSGNSH-SLW------------------------------ 269 (1013)
Q Consensus 224 RIalI~g~l~~g-g~~l~vl~Lak~L~e~--GyeV~Vlt~~~g~~~-~~~------------------------------ 269 (1013)
.|+|++++++.| |.+.++++.+.+|++. +++|.++|....... ...
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 479999999997 8999999999999998 899999876543311 000
Q ss_pred ---------HHHHHH---HHHHhhcCccEEEEcC-cchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccc---
Q 001781 270 ---------EQIAGQ---ISILGQEQYSLIDWSI-FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP--- 333 (1013)
Q Consensus 270 ---------r~i~~L---i~lLk~~kpDIIh~~~-~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~--- 333 (1013)
..+..+ ...+...+||+|..+. +...+.. .+.. .++|+|+++|.......+.
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~---~~~~---------~~~~~i~y~h~P~~~~d~l~~~ 149 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPL---VRLL---------GGCPVGAYVHYPTISTDMLQKV 149 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH---HHHh---------cCCeEEEEecCCcchHHHHHHH
Confidence 111111 1222235788765554 3332211 1111 3479999999652211110
Q ss_pred --------------hhhhhhHHHHHH------HHHHHhccccEEEEcCCCchhhhccC-C-CCCEEEeCCCCCCcccccc
Q 001781 334 --------------VYVERGFQNLLS------YWKSVFSRVNVIVFPDYTLPMLYSVL-D-AGNFFVIPGSPADVWAVEA 391 (1013)
Q Consensus 334 --------------~y~~~~l~klLs------~~~~~l~~AD~VI~~S~~~~~ly~~l-~-~~ki~VIPnggVDl~~~~~ 391 (1013)
........+.+. .+...++.+|.+++++.......... . ..++.+|+++ +|+ +.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~g-vd~---~~ 225 (419)
T cd03806 150 RSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPP-CDV---EE 225 (419)
T ss_pred hhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCC-CCH---HH
Confidence 000000111111 22335688999999987666543221 1 2478999986 776 55
Q ss_pred cCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc----cc
Q 001781 392 YSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD----GY 467 (1013)
Q Consensus 392 F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e----~Y 467 (1013)
|.+... ....+.++|+++||+.+ .||++.+++|+..+.++.+... .++++ |+|+|.+.. .+
T Consensus 226 ~~~~~~--------~~~~~~~~il~vgr~~~----~K~~~~li~A~~~l~~~~~~~~--~~~~~-lvivG~~~~~~~~~~ 290 (419)
T cd03806 226 LLKLPL--------DEKTRENQILSIAQFRP----EKNHPLQLRAFAKLLKRLPEEI--KEKIK-LVLIGSCRNEDDEKR 290 (419)
T ss_pred hccccc--------ccccCCcEEEEEEeecC----CCCHHHHHHHHHHHHHhCcccc--cCceE-EEEEcCCCCcccHHH
Confidence 533211 11345679999999977 8999999999999987653211 13688 678887643 25
Q ss_pred HHHHHHHHHHcCCCCCcEEEcCC--cccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCc-hhhhc--
Q 001781 468 NDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII-KEYVA-- 542 (1013)
Q Consensus 468 ~e~Lkela~eLgL~dg~V~FlG~--~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi-~EiI~-- 542 (1013)
.+.|+++++++++.+ +|+|+|. .+++..+|+.||++|+||..| +||++++||||||+|||+++.||+ .+++.
T Consensus 291 ~~~L~~~~~~l~l~~-~V~f~g~v~~~~l~~~l~~adv~v~~s~~E--~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~ 367 (419)
T cd03806 291 VEDLKLLAKELGLED-KVEFVVNAPFEELLEELSTASIGLHTMWNE--HFGIGVVEYMAAGLIPLAHASGGPLLDIVVPW 367 (419)
T ss_pred HHHHHHHHHHhCCCC-eEEEecCCCHHHHHHHHHhCeEEEECCccC--CcccHHHHHHHcCCcEEEEcCCCCchheeecc
Confidence 688999999999987 9999994 578999999999999999998 999999999999999999999875 57777
Q ss_pred -cCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHH
Q 001781 543 -EGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCV 595 (1013)
Q Consensus 543 -dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~ 595 (1013)
++.+|++++ |+++++++|.+++++++. .++.|++++++.+++|+++...
T Consensus 368 ~~g~~G~l~~--d~~~la~ai~~ll~~~~~--~~~~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 368 DGGPTGFLAS--TAEEYAEAIEKILSLSEE--ERLRIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred CCCCceEEeC--CHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHhhCHHHhc
Confidence 789999984 999999999999998763 2456777777777888887654
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-27 Score=258.85 Aligned_cols=317 Identities=16% Similarity=0.200 Sum_probs=233.8
Q ss_pred EEEEEecccCC---CCceehHHHHHHHHHHCCCEEEEEEcCCCCchHH-------------------------H------
Q 001781 224 RIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL-------------------------W------ 269 (1013)
Q Consensus 224 RIalI~g~l~~---gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~-------------------------~------ 269 (1013)
||+++...+.+ +|.+.++..+++.|.+.||+|.+++......... +
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYD 80 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhcc
Confidence 47778777665 6888999999999999999999997643321000 0
Q ss_pred --HHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHH
Q 001781 270 --EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW 347 (1013)
Q Consensus 270 --r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~ 347 (1013)
.....+.+++++.+||+||++............... .++|+|+++|+....... . .
T Consensus 81 ~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~---------~~~~~i~~~hd~~~~~~~----~----~----- 138 (359)
T cd03823 81 NPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARD---------RGIPIVLTLHDYWLICPR----Q----G----- 138 (359)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHh---------cCCCEEEEEeeeeeecch----h----h-----
Confidence 112335677888999999998764333222221111 458999999985321110 0 0
Q ss_pred HHHhccccEEEEcCCCchhhhcc--CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCc
Q 001781 348 KSVFSRVNVIVFPDYTLPMLYSV--LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE 425 (1013)
Q Consensus 348 ~~~l~~AD~VI~~S~~~~~ly~~--l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~ 425 (1013)
......|.+++.+......+.. ....++.+|||+ +|. ..+.+... +.+.++++|+++|++..
T Consensus 139 -~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~-~~~---~~~~~~~~--------~~~~~~~~i~~~G~~~~--- 202 (359)
T cd03823 139 -LFKKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNG-IDL---DRAKRPRR--------APPGGRLRFGFIGQLTP--- 202 (359)
T ss_pred -hhccCCCEEEEeCHHHHHHHHHcCCCccceEEecCC-cCh---hhcccccc--------CCCCCceEEEEEecCcc---
Confidence 0112238888888766555332 234689999997 776 44433211 34567789999999865
Q ss_pred cccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccE
Q 001781 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1013)
Q Consensus 426 ~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADI 503 (1013)
.||++.+++++..+.+ ++++ ++++|.++.. ...+... +..+ +|++.|.. +++..+|+.||+
T Consensus 203 -~k~~~~li~~~~~l~~---------~~~~-l~i~G~~~~~--~~~~~~~---~~~~-~v~~~g~~~~~~~~~~~~~ad~ 265 (359)
T cd03823 203 -HKGVDLLLEAFKRLPR---------GDIE-LVIVGNGLEL--EEESYEL---EGDP-RVEFLGAYPQEEIDDFYAEIDV 265 (359)
T ss_pred -ccCHHHHHHHHHHHHh---------cCcE-EEEEcCchhh--hHHHHhh---cCCC-eEEEeCCCCHHHHHHHHHhCCE
Confidence 7999999999988753 3688 5688988765 2232222 5555 89999965 889999999999
Q ss_pred EEEccC-CCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001781 504 VLYGSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1013)
Q Consensus 504 fVlPS~-~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aA 582 (1013)
+++||. .| ++|++++|||+||+|||+++.++..|++.++.+|++++++|+++++++|.+++++++. .++|++++
T Consensus 266 ~i~ps~~~e--~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~---~~~~~~~~ 340 (359)
T cd03823 266 LVVPSIWPE--NFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDL---LERLRAGI 340 (359)
T ss_pred EEEcCcccC--CCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHH---HHHHHHhH
Confidence 999998 45 9999999999999999999999999999999899999999999999999999998876 48889888
Q ss_pred HHHHHhhcHHHHHHHHHHHHH
Q 001781 583 RLHAKNMLALDCVTRYARILE 603 (1013)
Q Consensus 583 Re~ae~fs~e~~~~~y~~Lye 603 (1013)
++.... ++++++|.++|+
T Consensus 341 ~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 341 EPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHhhhH---HHHHHHHHHHhh
Confidence 886655 777778888875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-27 Score=273.66 Aligned_cols=333 Identities=11% Similarity=0.087 Sum_probs=236.7
Q ss_pred CCCEEEEEecccCC--CCceehHHHHHHHHHHCC-CEEEEEEcCCC------------------------------Cch-
Q 001781 221 RPPRIGLILGNMAK--DSRSLLLITVVKNLQKLG-YVFKIYAVRSG------------------------------NSH- 266 (1013)
Q Consensus 221 r~~RIalI~g~l~~--gg~~l~vl~Lak~L~e~G-yeV~Vlt~~~g------------------------------~~~- 266 (1013)
.++||++++....| +|.....+.++..|+++| |+|.++..... ...
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r 82 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISF 82 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEE
Confidence 46899999999999 888889999999999999 79999965321 000
Q ss_pred ------HHHHH-----------HHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc
Q 001781 267 ------SLWEQ-----------IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA 329 (1013)
Q Consensus 267 ------~~~r~-----------i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~ 329 (1013)
..+.. ...+.+.++.++||+||.+.....-......+... +..++|.++|....
T Consensus 83 ~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~--------k~~~vV~tyHT~y~- 153 (462)
T PLN02846 83 LPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKT--------KFRLVIGIVHTNYL- 153 (462)
T ss_pred ecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHh--------cCCcEEEEECCChH-
Confidence 00011 23367788889999999977654332111121111 12448888998532
Q ss_pred cccchhh----hhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHc
Q 001781 330 NRLPVYV----ERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKEN 405 (1013)
Q Consensus 330 ~~l~~y~----~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~l 405 (1013)
....++. ...+.+.+..|...+ .+|.+++++.....+. +...+.++ |||. +.|.+.... .+...
T Consensus 154 ~Y~~~~~~g~~~~~l~~~~~~~~~r~-~~d~vi~pS~~~~~l~-----~~~i~~v~-GVd~---~~f~~~~~~--~~~~~ 221 (462)
T PLN02846 154 EYVKREKNGRVKAFLLKYINSWVVDI-YCHKVIRLSAATQDYP-----RSIICNVH-GVNP---KFLEIGKLK--LEQQK 221 (462)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHH-hcCEEEccCHHHHHHh-----hCEEecCc-eech---hhcCCCccc--Hhhhc
Confidence 1111222 111233333443222 3889999997544321 23444455 4887 777654322 22233
Q ss_pred CCCCC--cEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCC
Q 001781 406 GFLKD--EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEH 483 (1013)
Q Consensus 406 gi~~d--~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg 483 (1013)
+ +.+ .++++|+||+.. +||++.+|+|++.+.+.. ++++ |+|+|+|+++ ++|+++++++++..
T Consensus 222 ~-~~~~~~~~~l~vGRL~~----eK~~~~Li~a~~~l~~~~-------~~~~-l~ivGdGp~~--~~L~~~a~~l~l~~- 285 (462)
T PLN02846 222 N-GEQAFTKGAYYIGKMVW----SKGYKELLKLLHKHQKEL-------SGLE-VDLYGSGEDS--DEVKAAAEKLELDV- 285 (462)
T ss_pred C-CCCCcceEEEEEecCcc----cCCHHHHHHHHHHHHhhC-------CCeE-EEEECCCccH--HHHHHHHHhcCCcE-
Confidence 3 334 346999999977 899999999999886543 5788 6799999987 99999999999874
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHH
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFS 563 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~ 563 (1013)
+| |.|. .+...+|+.+|+||+||..| +||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.
T Consensus 286 ~v-f~G~-~~~~~~~~~~DvFv~pS~~E--t~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~ 358 (462)
T PLN02846 286 RV-YPGR-DHADPLFHDYKVFLNPSTTD--VVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATL 358 (462)
T ss_pred EE-ECCC-CCHHHHHHhCCEEEECCCcc--cchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHH
Confidence 44 7785 45668999999999999998 99999999999999999999998 59999999999884 8999999999
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHH
Q 001781 564 LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 564 ~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~l 605 (1013)
+++.++. ..++.+++ ++|+|+.+++++.++|+--
T Consensus 359 ~~l~~~~-----~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 359 KALAEEP-----APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred HHHccCc-----hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 9998653 22333333 5999999999999999753
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-26 Score=264.33 Aligned_cols=334 Identities=13% Similarity=0.033 Sum_probs=225.6
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch-H------------------H---HH---H----H-
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-S------------------L---WE---Q----I- 272 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-~------------------~---~r---~----i- 272 (1013)
.|+++++-.+ .|....+..+++.|.+.||+|++++....... . . .. . +
T Consensus 4 ~~~~~~~~~~--~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (415)
T cd03816 4 KRVCVLVLGD--IGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVLW 81 (415)
T ss_pred cEEEEEEecc--cCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHHHHHHHH
Confidence 3455544432 34455568899999999999999986432100 0 0 00 0 0
Q ss_pred --HH-HHHHHhhcCccEEEEcCcchH---HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc---cc-chhhhhhHHH
Q 001781 273 --AG-QISILGQEQYSLIDWSIFDGI---IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN---RL-PVYVERGFQN 342 (1013)
Q Consensus 273 --~~-Li~lLk~~kpDIIh~~~~~~~---lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~---~l-~~y~~~~l~k 342 (1013)
.. +..+++..+||+||++..... .++.++.+. .++|+|++.|+..... .. .......+..
T Consensus 82 ~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~----------~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~ 151 (415)
T cd03816 82 QFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLL----------RRTKLIIDWHNYGYTILALKLGENHPLVRLAK 151 (415)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH----------hCCeEEEEcCCchHHHHhcccCCCCHHHHHHH
Confidence 01 122345678999999764432 223333332 3589999999853210 00 0011111222
Q ss_pred HHHHHHHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCcccccccCcchhHH---HHHH-------------H
Q 001781 343 LLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKY---QLRK-------------E 404 (1013)
Q Consensus 343 lLs~~~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~---~~R~-------------~ 404 (1013)
++.+ ..++.+|.+++.+....... .+.+.+++.+|||+ .+ ..|.+..... .+.. .
T Consensus 152 ~~e~--~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng-~~----~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (415)
T cd03816 152 WYEK--LFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDR-PP----EQFRPLPLEEKHELFLKLAKTFLTRELRIGA 224 (415)
T ss_pred HHHH--HHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCC-CH----HHceeCcHHHHHHHHHhcccccccccccccc
Confidence 2222 24577999999998776542 24677899999996 32 3454432211 1111 1
Q ss_pred cCC-CCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCC
Q 001781 405 NGF-LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEH 483 (1013)
Q Consensus 405 lgi-~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg 483 (1013)
.++ +++..+++++||+.+ .||++.+++|+..+.+...+ ....|+++ ++|+|+|+.. +.++++++++++.+
T Consensus 225 ~~~~~~~~~vi~~~grl~~----~K~~~~li~A~~~l~~~~~~-~~~~~~i~-l~ivG~G~~~--~~l~~~~~~~~l~~- 295 (415)
T cd03816 225 VQLSEERPALLVSSTSWTP----DEDFGILLDALVAYEKSAAT-GPKLPKLL-CIITGKGPLK--EKYLERIKELKLKK- 295 (415)
T ss_pred ceecCCCceEEEEeccccC----CCCHHHHHHHHHHHHHhhcc-cccCCCEE-EEEEecCccH--HHHHHHHHHcCCCc-
Confidence 122 234568888999866 89999999999988654211 11226799 5699999875 99999999999985
Q ss_pred cEEEcC--CcccHHHHHHHccEEEEccCC-CCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHH
Q 001781 484 SVRHYG--FNGDVNGVLLMADIVLYGSSQ-VEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1013)
Q Consensus 484 ~V~FlG--~~eDl~~lLaaADIfVlPS~~-EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAe 560 (1013)
.+.+.| +.+++..+|+.||++|+++.. +.+++|++++||||||+|||+++.|+..|+|+++.+|++++ |++++++
T Consensus 296 ~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~ 373 (415)
T cd03816 296 VTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAE 373 (415)
T ss_pred EEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHH
Confidence 455556 458999999999999975432 11389999999999999999999999999999999999994 8999999
Q ss_pred HHHHHHhC---cccHHHHHHHHHHHHHHHHhh
Q 001781 561 AFSLFISN---GKLSKFARTVASAGRLHAKNM 589 (1013)
Q Consensus 561 AI~~LL~d---~elR~~~~~Mg~aARe~ae~f 589 (1013)
+|.++++| ++. +++|++++++.++..
T Consensus 374 ~i~~ll~~~~~~~~---~~~m~~~~~~~~~~~ 402 (415)
T cd03816 374 QLIDLLSNFPNRGK---LNSLKKGAQEESELR 402 (415)
T ss_pred HHHHHHhcCCCHHH---HHHHHHHHHHhhhcC
Confidence 99999999 554 599999999988443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=275.13 Aligned_cols=288 Identities=12% Similarity=0.111 Sum_probs=212.6
Q ss_pred HHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHH
Q 001781 270 EQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349 (1013)
Q Consensus 270 r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~ 349 (1013)
..+..+...|...++||+++..........+.. . ..+|++.++|+.-............+.........
T Consensus 198 ~l~~~f~~~L~~~~~di~i~dr~~~~~~~~~~~--~---------~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~ 266 (500)
T TIGR02918 198 ELIAYFLKQLNLTKKDIIILDRSTGIGQAVLEN--K---------GPAKLGVVVHAEHFSESATNETYILWNNYYEYQFS 266 (500)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCcccchHHHhc--C---------CCceEEEEEChhhhcCccCcchhHHHHHHHHHHHh
Confidence 334445555556788999985544322222211 1 45889999998543322111111111222222233
Q ss_pred HhccccEEEEcCCCchhh----hc--cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCc
Q 001781 350 VFSRVNVIVFPDYTLPML----YS--VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFY 423 (1013)
Q Consensus 350 ~l~~AD~VI~~S~~~~~l----y~--~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~y 423 (1013)
..+.+|.+|+++...+.. +. .....++.+||++ ++. ..+.+. ...+...|+++||+.+
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g-~~~---~~~~~~-----------~~r~~~~il~vGrl~~- 330 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVG-SLD---ELQYPE-----------QERKPFSIITASRLAK- 330 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCC-Ccc---cccCcc-----------cccCCeEEEEEecccc-
Confidence 456789999988754332 21 1235679999997 432 222211 0124468999999977
Q ss_pred CccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccE
Q 001781 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI 503 (1013)
Q Consensus 424 k~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADI 503 (1013)
.||++.+|+|+..+.++. |+++ |+|+|.|+.. +.|+++++++++.+ +|+|.|.. ++..+|+.||+
T Consensus 331 ---~Kg~~~li~A~~~l~~~~-------p~~~-l~i~G~G~~~--~~l~~~i~~~~l~~-~V~f~G~~-~~~~~~~~adv 395 (500)
T TIGR02918 331 ---EKHIDWLVKAVVKAKKSV-------PELT-FDIYGEGGEK--QKLQKIINENQAQD-YIHLKGHR-NLSEVYKDYEL 395 (500)
T ss_pred ---ccCHHHHHHHHHHHHhhC-------CCeE-EEEEECchhH--HHHHHHHHHcCCCC-eEEEcCCC-CHHHHHHhCCE
Confidence 899999999999987654 7899 6789999875 89999999999987 99999965 79999999999
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCCEEEcCCC-CchhhhccCCeEEEEcCC----C----HHHHHHHHHHHHhCcccHHH
Q 001781 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKD----N----PEGLSRAFSLFISNGKLSKF 574 (1013)
Q Consensus 504 fVlPS~~EEEGFGivVLEAMA~G~PVIASdvg-Gi~EiI~dG~~G~Lv~p~----D----~eeLAeAI~~LL~d~elR~~ 574 (1013)
+|+||..| |||++++||||||+|||+++++ |.+|+|.+|.+|++++++ | +++||++|.++++ ++.
T Consensus 396 ~v~pS~~E--gfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~--- 469 (500)
T TIGR02918 396 YLSASTSE--GFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SND--- 469 (500)
T ss_pred EEEcCccc--cccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHH---
Confidence 99999998 9999999999999999999986 899999999999999843 3 8899999999995 433
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHH
Q 001781 575 ARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 575 ~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~l 605 (1013)
+.+|+++|++.+++|+++.++++|.++++++
T Consensus 470 ~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 470 IDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 5899999999999999999999999998763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=261.96 Aligned_cols=328 Identities=11% Similarity=0.101 Sum_probs=226.1
Q ss_pred CCEEEEEecccCCCCceehHH-------------HHHHHHH-HCCCEEEEE-EcCCCCchHH---HHHHHHHHHHHhhcC
Q 001781 222 PPRIGLILGNMAKDSRSLLLI-------------TVVKNLQ-KLGYVFKIY-AVRSGNSHSL---WEQIAGQISILGQEQ 283 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl-------------~Lak~L~-e~GyeV~Vl-t~~~g~~~~~---~r~i~~Li~lLk~~k 283 (1013)
..+|.+|++.+....|+++.- .+.++|+ +.|.+..+- .+..+.+... .--++.+.+.+..++
T Consensus 355 ~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~ 434 (794)
T PLN02501 355 KQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKD 434 (794)
T ss_pred CceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCCCCceEEeecchhccCCccccchHHHHHHhhccC
Confidence 678889998888755544432 3566773 445432211 1222211111 123456788888999
Q ss_pred ccEEEEcCcchHH-H--HHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHH----HHHHHHHHhccccE
Q 001781 284 YSLIDWSIFDGII-A--DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQN----LLSYWKSVFSRVNV 356 (1013)
Q Consensus 284 pDIIh~~~~~~~l-v--~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~k----lLs~~~~~l~~AD~ 356 (1013)
|||||.......- . +...++. .+ |+|.++|..-.. ...+|....+.. .+..|...+. ||.
T Consensus 435 PDVVHLatP~~LGw~~~Glr~ArK----------l~-PVVasyHTny~e-Yl~~y~~g~L~~~llk~l~~~v~r~h-cD~ 501 (794)
T PLN02501 435 ADIAILEEPEHLNWYHHGKRWTDK----------FN-HVVGVVHTNYLE-YIKREKNGALQAFFVKHINNWVTRAY-CHK 501 (794)
T ss_pred CCEEEECCchhhccHHHHHHHHHH----------cC-CeEEEEeCCcHH-HHhHhcchhHHHHHHHHHHHHHHHhh-CCE
Confidence 9999997665432 2 2223322 23 799998885322 222333222333 3333433222 899
Q ss_pred EEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHH
Q 001781 357 IVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 357 VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
|+++|.....+ +...+..+ + |||+ +.|.|..... .+..++++.....++|+||+.+ +||++.+|+|
T Consensus 502 VIaPS~atq~L----~~~vI~nV-n-GVDt---e~F~P~~r~~-~~r~lgi~~~~kgiLfVGRLa~----EKGld~LLeA 567 (794)
T PLN02501 502 VLRLSAATQDL----PKSVICNV-H-GVNP---KFLKIGEKVA-EERELGQQAFSKGAYFLGKMVW----AKGYRELIDL 567 (794)
T ss_pred EEcCCHHHHHh----cccceeec-c-cccc---cccCCcchhH-HHHhcCCccccCceEEEEcccc----cCCHHHHHHH
Confidence 99999655532 22222222 4 4888 7887654322 2356677654456899999977 8999999999
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCcc
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
++.+..+. ++++ |+|+|+|+.. +.++++++++++ +|.|+|..+++..+|+.+||||+||.+| +||
T Consensus 568 la~L~~~~-------pnvr-LvIVGDGP~r--eeLe~la~eLgL---~V~FLG~~dd~~~lyasaDVFVlPS~sE--gFG 632 (794)
T PLN02501 568 LAKHKNEL-------DGFN-LDVFGNGEDA--HEVQRAAKRLDL---NLNFLKGRDHADDSLHGYKVFINPSISD--VLC 632 (794)
T ss_pred HHHHHhhC-------CCeE-EEEEcCCccH--HHHHHHHHHcCC---EEEecCCCCCHHHHHHhCCEEEECCCcc--cch
Confidence 99886543 5788 6799999986 899999998887 4899999888999999999999999998 999
Q ss_pred HHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHH
Q 001781 517 SLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1013)
Q Consensus 517 ivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~ 596 (1013)
++++||||||+|||+++.+|. +++.++.+|++. +|+++++++|.+++.++..+ ..+++ ...++|+.+++
T Consensus 633 lVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~~r---l~~~a-----~~~~SWeAaad 701 (794)
T PLN02501 633 TATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEPQP---LTPEQ-----RYNLSWEAATQ 701 (794)
T ss_pred HHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCchhh---hHHHH-----HhhCCHHHHHH
Confidence 999999999999999999985 447777788765 69999999999999988742 22322 34899999988
Q ss_pred HHHHHH
Q 001781 597 RYARIL 602 (1013)
Q Consensus 597 ~y~~Ly 602 (1013)
++.+.-
T Consensus 702 rLle~~ 707 (794)
T PLN02501 702 RFMEYS 707 (794)
T ss_pred HHHHhh
Confidence 876643
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=256.46 Aligned_cols=325 Identities=14% Similarity=0.152 Sum_probs=220.6
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCCCCc--hH---H------------------H--------------------HH
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--HS---L------------------W--------------------EQ 271 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~--~~---~------------------~--------------------r~ 271 (1013)
.|..+...++++.|.+. |+|++++..+.+. .. . + ..
T Consensus 14 ~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~ 92 (397)
T TIGR03087 14 KGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLTGEPLSLPYYRSRRL 92 (397)
T ss_pred CCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcCCCCCcchhhCCHHH
Confidence 57789999999999775 8999998864321 00 0 0 00
Q ss_pred HHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccch-----hhhhhHH----H
Q 001781 272 IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPV-----YVERGFQ----N 342 (1013)
Q Consensus 272 i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~-----y~~~~l~----k 342 (1013)
...+.+++++.++|+||++..... ...... ..++|+|++.|+.....+..+ .+...+. +
T Consensus 93 ~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~---------~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (397)
T TIGR03087 93 ARWVNALLAAEPVDAIVVFSSAMA---QYVTPH---------VRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGR 160 (397)
T ss_pred HHHHHHHHhhCCCCEEEEeccccc---eecccc---------ccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHH
Confidence 111345566688999998653221 111100 145899999887421111000 0011110 1
Q ss_pred HHHHH-HHHhccccEEEEcCCCchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEc
Q 001781 343 LLSYW-KSVFSRVNVIVFPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG 418 (1013)
Q Consensus 343 lLs~~-~~~l~~AD~VI~~S~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VG 418 (1013)
.+..+ +..++.+|.+++.+......+. .....++.+|||+ +|. +.|.+.... ...++.+.++|+|+|
T Consensus 161 ~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipng-vd~---~~f~~~~~~-----~~~~~~~~~~ilf~G 231 (397)
T TIGR03087 161 LLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNG-VDA---DFFSPDRDY-----PNPYPPGKRVLVFTG 231 (397)
T ss_pred HHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecc-cch---hhcCCCccc-----cCCCCCCCcEEEEEE
Confidence 11122 3467889999999887765543 2345689999997 887 666543211 112334567899999
Q ss_pred cCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHH
Q 001781 419 SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVL 498 (1013)
Q Consensus 419 Rl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lL 498 (1013)
|+.. .||++.++.++..+..... ...|+++ ++|+|.++. ..++ +++..+ +|+|+|..+++..+|
T Consensus 232 ~l~~----~k~~~~l~~~~~~~~~~l~---~~~p~~~-l~ivG~g~~---~~~~----~l~~~~-~V~~~G~v~~~~~~~ 295 (397)
T TIGR03087 232 AMDY----WPNIDAVVWFAERVFPAVR---ARRPAAE-FYIVGAKPS---PAVR----ALAALP-GVTVTGSVADVRPYL 295 (397)
T ss_pred ecCC----ccCHHHHHHHHHHHHHHHH---HHCCCcE-EEEECCCCh---HHHH----HhccCC-CeEEeeecCCHHHHH
Confidence 9866 7999988855443322221 1126899 569999874 3333 344455 799999888999999
Q ss_pred HHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHH
Q 001781 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTV 578 (1013)
Q Consensus 499 aaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~M 578 (1013)
+.||++|+||... ||+|++++||||||+|||+|+.++. .+...+++|++++ +|+++++++|.++++|+++ +++|
T Consensus 296 ~~adv~v~Ps~~~-eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~---~~~~ 369 (397)
T TIGR03087 296 AHAAVAVAPLRIA-RGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-ADPADFAAAILALLANPAE---REEL 369 (397)
T ss_pred HhCCEEEeccccc-CCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CCHHHHHHHHHHHHcCHHH---HHHH
Confidence 9999999999753 3999999999999999999997543 2333445789887 8999999999999999876 4899
Q ss_pred HHHHHHHH-HhhcHHHHHHHHHHHHH
Q 001781 579 ASAGRLHA-KNMLALDCVTRYARILE 603 (1013)
Q Consensus 579 g~aARe~a-e~fs~e~~~~~y~~Lye 603 (1013)
+++|++.+ ++|+|+..++++.++|+
T Consensus 370 ~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 370 GQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999976 68999999999988874
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=242.00 Aligned_cols=369 Identities=11% Similarity=0.055 Sum_probs=243.9
Q ss_pred cccc--ccCCCCCCccccccccCCeeeeee------------ccccccC-CCCCC----CCCCCCCC--CCCEEEEEecc
Q 001781 173 SIAS--VFGAERGRPIREELRFGSRLKFVP------------DQVGFGN-GLDGL----RSTPRFGV--RPPRIGLILGN 231 (1013)
Q Consensus 173 si~~--~~~~~~gg~~~~~~~~g~~~~~~~------------~~~~~g~-~~~~~----rs~~r~g~--r~~RIalI~g~ 231 (1013)
++|| ||||+||| ||+|+|.. ..+|+|| +++++ +..++|++ .+-+|.||.-.
T Consensus 45 tvgfFHPYCNAGGG--------GErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk 116 (465)
T KOG1387|consen 45 TVGFFHPYCNAGGG--------GERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLK 116 (465)
T ss_pred EEEEecccccCCCC--------cceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEE
Confidence 4577 99999999 99999933 2336666 45554 44555543 24444444311
Q ss_pred cCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHHHH---HHHHhhcCcc-EEEEcCcchHHHHHHHHHHhhh
Q 001781 232 MAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQ---ISILGQEQYS-LIDWSIFDGIIADSLEAKEAIS 307 (1013)
Q Consensus 232 l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~i~~L---i~lLk~~kpD-IIh~~~~~~~lv~~Laak~~~s 307 (1013)
+ .-......|.- +.-+-+.++.+ ...+-+..|| .|++..|+..+-.. .. .
T Consensus 117 ~------------R~lVea~~~~h---------fTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~-r~--l-- 170 (465)
T KOG1387|consen 117 L------------RYLVEASTWKH---------FTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIF-RR--L-- 170 (465)
T ss_pred e------------eeeeecccccc---------eehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHH-HH--H--
Confidence 1 00001111111 11112333332 2334468899 67888887654221 11 1
Q ss_pred hcccCCCCCCcEEEEEcCCccccccchhh-------------hhhHHHHHHHHHHHhccccEEEEcCCCchhh-hccCCC
Q 001781 308 SLMQEPFHSIPLVWIIQEDSLANRLPVYV-------------ERGFQNLLSYWKSVFSRVNVIVFPDYTLPML-YSVLDA 373 (1013)
Q Consensus 308 ~l~qep~~~IPVI~tvHg~~l~~~l~~y~-------------~~~l~klLs~~~~~l~~AD~VI~~S~~~~~l-y~~l~~ 373 (1013)
.++||+.++|.+.+...+...- +..+..+...|..+=+.||.+++.+...... .+-+..
T Consensus 171 -------~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~ 243 (465)
T KOG1387|consen 171 -------RRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS 243 (465)
T ss_pred -------ccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc
Confidence 4689999999977665442111 1111122222233346788888876544332 223334
Q ss_pred CCEEEeCCCCCCcccccccCcchhHHHHHHHcCC-CCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCC
Q 001781 374 GNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGF-LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEG 452 (1013)
Q Consensus 374 ~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi-~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gp 452 (1013)
.++.+++.+ .++ ..+....+- ..+.+.++++|++.| +|+|. +|+.++......+.. ...+
T Consensus 244 ~~~~iVyPP-C~~------------e~lks~~~te~~r~~~ll~l~Q~RP----EKnH~-~Lql~Al~~~~~pl~-a~~~ 304 (465)
T KOG1387|consen 244 NTCSIVYPP-CST------------EDLKSKFGTEGERENQLLSLAQFRP----EKNHK-ILQLFALYLKNEPLE-ASVS 304 (465)
T ss_pred cceeEEcCC-CCH------------HHHHHHhcccCCcceEEEEEeecCc----ccccH-HHHHHHHHHhcCchh-hccC
Confidence 455555442 443 133444433 456789999999988 89999 555555444433322 2346
Q ss_pred CeEEEEEEcC----CCcccHHHHHHHHHHcCCCCCcEEEcC--CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhC
Q 001781 453 SFKFVFLCGN----STDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG 526 (1013)
Q Consensus 453 dikFLVIvG~----G~e~Y~e~Lkela~eLgL~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G 526 (1013)
+++ |+|+|. .++.+.+.|+.++++|.++. +|.|.- +.+++..+|+.|.+.|+.+..| +||+.++|+||+|
T Consensus 305 ~iK-L~ivGScRneeD~ervk~Lkd~a~~L~i~~-~v~F~~N~Py~~lv~lL~~a~iGvh~MwNE--HFGIsVVEyMAAG 380 (465)
T KOG1387|consen 305 PIK-LIIVGSCRNEEDEERVKSLKDLAEELKIPK-HVQFEKNVPYEKLVELLGKATIGVHTMWNE--HFGISVVEYMAAG 380 (465)
T ss_pred Cce-EEEEeccCChhhHHHHHHHHHHHHhcCCcc-ceEEEecCCHHHHHHHhccceeehhhhhhh--hcchhHHHHHhcC
Confidence 889 778886 34446788899999999997 899998 6689999999999999999988 9999999999999
Q ss_pred CCEEEcCCCCchh-hhcc--C-CeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 001781 527 IPVITPDFPIIKE-YVAE--G-AQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1013)
Q Consensus 527 ~PVIASdvgGi~E-iI~d--G-~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Ly 602 (1013)
+.+|+.+.||+.- +|.+ | .+||+++ +.++++++|.+++.... +++..|+++||..+.+|+..+..+.+...+
T Consensus 381 lIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~--~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 381 LIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNY--DERNMMRRNARKSLARFGELKFDKDWENPI 456 (465)
T ss_pred ceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHhhHHHHHHhHhHHH
Confidence 9999999999864 4433 2 5899995 88999999999999776 336889999999999999999999999888
Q ss_pred HHHhcCC
Q 001781 603 ENVLNFP 609 (1013)
Q Consensus 603 e~lL~~p 609 (1013)
..++..+
T Consensus 457 ~kll~e~ 463 (465)
T KOG1387|consen 457 CKLLEEE 463 (465)
T ss_pred HHhhccc
Confidence 8887643
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=248.79 Aligned_cols=273 Identities=14% Similarity=0.157 Sum_probs=204.2
Q ss_pred hcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEc
Q 001781 281 QEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1013)
Q Consensus 281 ~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~ 360 (1013)
..++|+++.+........ +.. .. ...+.|.++|+.......... ...+..........++++|.+++.
T Consensus 97 ~~~~diii~~~~~~~~~~-~~~-~~---------~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ii~~ 164 (372)
T cd04949 97 DTKPDVFILDRPTLDGQA-LLN-MK---------KAAKVVVVLHSNHVSDNNDPV-HSLINNFYEYVFENLDKVDGVIVA 164 (372)
T ss_pred CCCCCEEEECCccccchh-HHh-cc---------CCceEEEEEChHHhCCccccc-ccccchhhHHHHhChhhCCEEEEc
Confidence 378999888665443331 111 11 235677788974322111000 001112222223346778999998
Q ss_pred CCCchhhh-ccCC-CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHH
Q 001781 361 DYTLPMLY-SVLD-AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1013)
Q Consensus 361 S~~~~~ly-~~l~-~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa 438 (1013)
+....... ..++ ..++.+||++ ++. ..+.+.. ........|+++||+.+ .||++.+++|+.
T Consensus 165 s~~~~~~l~~~~~~~~~v~~ip~g-~~~---~~~~~~~---------~~~~~~~~i~~vgrl~~----~K~~~~li~a~~ 227 (372)
T cd04949 165 TEQQKQDLQKQFGNYNPIYTIPVG-SID---PLKLPAQ---------FKQRKPHKIITVARLAP----EKQLDQLIKAFA 227 (372)
T ss_pred cHHHHHHHHHHhCCCCceEEEccc-ccC---hhhcccc---------hhhcCCCeEEEEEccCc----ccCHHHHHHHHH
Confidence 86654432 1222 2348899997 665 4443221 11234568999999866 899999999999
Q ss_pred HHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHH
Q 001781 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1013)
Q Consensus 439 ~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGiv 518 (1013)
.+.++. |+++ |+|+|.++.. ..++++++++++.+ +|.|.|+.+++..+|+.||++|+||..| |||++
T Consensus 228 ~l~~~~-------~~~~-l~i~G~g~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~S~~E--g~~~~ 294 (372)
T cd04949 228 KVVKQV-------PDAT-LDIYGYGDEE--EKLKELIEELGLED-YVFLKGYTRDLDEVYQKAQLSLLTSQSE--GFGLS 294 (372)
T ss_pred HHHHhC-------CCcE-EEEEEeCchH--HHHHHHHHHcCCcc-eEEEcCCCCCHHHHHhhhhEEEeccccc--ccChH
Confidence 987654 6899 5689998875 78888899999997 9999998899999999999999999987 99999
Q ss_pred HHHHHHhCCCEEEcCCC-CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHH
Q 001781 519 IVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTR 597 (1013)
Q Consensus 519 VLEAMA~G~PVIASdvg-Gi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~ 597 (1013)
++|||+||+|||+++++ |..+++.++.+|++++++|+++++++|..++++++. .++|++++++.+++|++++++++
T Consensus 295 ~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~---~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 295 LMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKL---LQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHH---HHHHHHHHHHHHHHhhHHHHHhc
Confidence 99999999999999987 899999999999999999999999999999999876 48999999999999999988765
Q ss_pred H
Q 001781 598 Y 598 (1013)
Q Consensus 598 y 598 (1013)
|
T Consensus 372 w 372 (372)
T cd04949 372 W 372 (372)
T ss_pred C
Confidence 3
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=248.81 Aligned_cols=271 Identities=18% Similarity=0.113 Sum_probs=199.7
Q ss_pred cCccEEEEcCcchHHHH-HHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEc
Q 001781 282 EQYSLIDWSIFDGIIAD-SLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP 360 (1013)
Q Consensus 282 ~kpDIIh~~~~~~~lv~-~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~ 360 (1013)
.++|++|.+.+...... .+..+.. ...++|.+.|+..+....... .........++.+|.+++.
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~---------~~~~~i~~~Hg~d~~~~~~~~------~~~~~~~~~~~~~d~ii~~ 190 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEY---------LRKRVISRAHGYDLYEDRYPS------GYIPLRRYLLSSLDAVFPC 190 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhc---------CCceEEEEeccchhhhhhccc------cchHHHHHHHhcCCEEEEC
Confidence 55678887554443322 2222221 223599999996543221100 0011122346789999999
Q ss_pred CCCchhhhc---cCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHH
Q 001781 361 DYTLPMLYS---VLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1013)
Q Consensus 361 S~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAf 437 (1013)
+........ ....+++.+++++ ++. ..+.+. ....+.+.|+++||+.+ .||++.+++|+
T Consensus 191 S~~~~~~l~~~~~~~~~ki~vi~~g-v~~---~~~~~~----------~~~~~~~~il~~Grl~~----~Kg~~~li~a~ 252 (407)
T cd04946 191 SEQGRNYLQKRYPAYKEKIKVSYLG-VSD---PGIISK----------PSKDDTLRIVSCSYLVP----VKRVDLIIKAL 252 (407)
T ss_pred CHHHHHHHHHHCCCccccEEEEECC-ccc---ccccCC----------CCCCCCEEEEEeecccc----ccCHHHHHHHH
Confidence 877655422 3345688899986 665 333221 12346789999999976 79999999999
Q ss_pred HHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHH--ccEEEEccCCCCC
Q 001781 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLM--ADIVLYGSSQVEQ 513 (1013)
Q Consensus 438 a~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaa--ADIfVlPS~~EEE 513 (1013)
..+.+..+. .+++ ++++|.|+.. +.+++++++++..+ +|+|+|.. +++..+|+. +|++++||..|
T Consensus 253 ~~l~~~~p~-----~~l~-~~iiG~g~~~--~~l~~~~~~~~~~~-~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~E-- 321 (407)
T cd04946 253 AALAKARPS-----IKIK-WTHIGGGPLE--DTLKELAESKPENI-SVNFTGELSNSEVYKLYKENPVDVFVNLSESE-- 321 (407)
T ss_pred HHHHHhCCC-----ceEE-EEEEeCchHH--HHHHHHHHhcCCCc-eEEEecCCChHHHHHHHhhcCCCEEEeCCccc--
Confidence 998765311 1466 4578988865 88999998888887 99999965 578899976 78999999998
Q ss_pred CccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCC-CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-HhhcH
Q 001781 514 GFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKD-NPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-KNMLA 591 (1013)
Q Consensus 514 GFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~-D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e~fs~ 591 (1013)
|+|++++||||||+|||+|++||.+|+|.++++|+++++. |+++++++|.++++|+++ +++|+++|++.+ ++|++
T Consensus 322 g~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~---~~~m~~~ar~~~~~~f~~ 398 (407)
T cd04946 322 GLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEE---YQTMREKAREKWEENFNA 398 (407)
T ss_pred cccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHH---HHHHHHHHHHHHHHHcCH
Confidence 9999999999999999999999999999999999999864 899999999999998876 499999999965 67777
Q ss_pred HHHHHHHH
Q 001781 592 LDCVTRYA 599 (1013)
Q Consensus 592 e~~~~~y~ 599 (1013)
+....+|.
T Consensus 399 ~~~~~~~~ 406 (407)
T cd04946 399 SKNYREFA 406 (407)
T ss_pred HHhHHHhc
Confidence 77776664
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=241.94 Aligned_cols=309 Identities=15% Similarity=0.136 Sum_probs=208.8
Q ss_pred EEEEEecccC-CCCceehHHHHHHHHHHCCCEEEEEEcCCCCchH-----------------HH-------HHHHHHHHH
Q 001781 224 RIGLILGNMA-KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHS-----------------LW-------EQIAGQISI 278 (1013)
Q Consensus 224 RIalI~g~l~-~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~-----------------~~-------r~i~~Li~l 278 (1013)
||+++...+. .||.+.++.++++.|.+.++ .++......... .. ..+..+...
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~~~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPDADI--FTLVDDPDKLPRLLRLKKIRTSFIQKLPFARRRYRKYLPLMPLAIEQ 78 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCCCCE--EEEeecCCccchhhcCCceeechhhhchhhHhhHhhhCchhhHHHHh
Confidence 5788887776 49999999999999876433 332221111100 00 111112334
Q ss_pred HhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc------cccchh---hh---hhHHHHHHH
Q 001781 279 LGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA------NRLPVY---VE---RGFQNLLSY 346 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~------~~l~~y---~~---~~l~klLs~ 346 (1013)
+...++|+|+.+...... ..+ . ...+|.++++|..... ...... .. ......+..
T Consensus 79 ~~~~~~D~v~~~~~~~~~-~~~----~--------~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (351)
T cd03804 79 FDLSGYDLVISSSHAVAK-GVI----T--------RPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI 145 (351)
T ss_pred ccccCCCEEEEcCcHHhc-ccc----C--------CCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH
Confidence 555789999876432211 111 0 1457888888873210 000000 00 011222222
Q ss_pred H-HHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCc
Q 001781 347 W-KSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE 425 (1013)
Q Consensus 347 ~-~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~ 425 (1013)
+ ...++++|.+++.+...+.........+..+|+|+ +|. +.|.+.. ....+++++||+.+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~vi~~~-~d~---~~~~~~~------------~~~~~il~~G~~~~--- 206 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKYYGRDATVIYPP-VDT---DRFTPAE------------EKEDYYLSVGRLVP--- 206 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHHhCCCcEEECCC-CCH---hhcCcCC------------CCCCEEEEEEcCcc---
Confidence 2 33578999999999877665433333456889886 776 5554321 12347899999866
Q ss_pred cccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHccE
Q 001781 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1013)
Q Consensus 426 ~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaADI 503 (1013)
.||++.+++|+..+ + ++ ++|+|.|+.. +.+++ +..+ +|+|.|.. +++..+|+.||+
T Consensus 207 -~K~~~~li~a~~~~-----------~-~~-l~ivG~g~~~--~~l~~-----~~~~-~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 207 -YKRIDLAIEAFNKL-----------G-KR-LVVIGDGPEL--DRLRA-----KAGP-NVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred -ccChHHHHHHHHHC-----------C-Cc-EEEEECChhH--HHHHh-----hcCC-CEEEecCCCHHHHHHHHHhCCE
Confidence 79999999999765 3 56 5689998864 55554 4455 89999965 459999999999
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc-cHHHHHHHHHHH
Q 001781 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK-LSKFARTVASAG 582 (1013)
Q Consensus 504 fVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~e-lR~~~~~Mg~aA 582 (1013)
+++||. | +||++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|..++++++ . .++ +
T Consensus 265 ~v~ps~-e--~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~~---~~~----~ 334 (351)
T cd03804 265 FLFPAE-E--DFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNEDFD---PQA----I 334 (351)
T ss_pred EEECCc-C--CCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcccC---HHH----H
Confidence 999999 7 999999999999999999999999999999999999999999999999999999883 2 234 4
Q ss_pred HHHHHhhcHHHHHHHH
Q 001781 583 RLHAKNMLALDCVTRY 598 (1013)
Q Consensus 583 Re~ae~fs~e~~~~~y 598 (1013)
++.+++|++++..+++
T Consensus 335 ~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 335 RAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHhcCHHHHHHHh
Confidence 4445667777766543
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-23 Score=238.69 Aligned_cols=254 Identities=13% Similarity=0.051 Sum_probs=177.0
Q ss_pred HhhcCccEEEEcCcchH---HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc---cc-chhhhhhHHHHHHHHHHHh
Q 001781 279 LGQEQYSLIDWSIFDGI---IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN---RL-PVYVERGFQNLLSYWKSVF 351 (1013)
Q Consensus 279 Lk~~kpDIIh~~~~~~~---lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~---~l-~~y~~~~l~klLs~~~~~l 351 (1013)
++..+||+||++..... +++.++++. .+.|+|+++|+..... .. ......+....+.+ ..+
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~ 163 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWL----------RRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYER--HYG 163 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHH----------hCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHH--HHH
Confidence 35589999999865542 233444433 3589999999852110 00 00111112222222 346
Q ss_pred ccccEEEEcCCCchhhhcc-CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCH
Q 001781 352 SRVNVIVFPDYTLPMLYSV-LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1013)
Q Consensus 352 ~~AD~VI~~S~~~~~ly~~-l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~ 430 (1013)
+.+|.+++.+......... ... ++.+|||+ + . +.|.+...... .. .++..+++++||+.+ .||+
T Consensus 164 ~~ad~ii~~S~~~~~~l~~~~g~-~i~vi~n~-~-~---~~f~~~~~~~~----~~-~~~~~~i~~~grl~~----~k~~ 228 (371)
T PLN02275 164 KMADGHLCVTKAMQHELDQNWGI-RATVLYDQ-P-P---EFFRPASLEIR----LR-PNRPALVVSSTSWTP----DEDF 228 (371)
T ss_pred hhCCEEEECCHHHHHHHHHhcCC-CeEEECCC-C-H---HHcCcCCchhc----cc-CCCcEEEEEeCceec----cCCH
Confidence 7799999998877654321 122 27899986 2 2 45544321111 11 224467889999866 8999
Q ss_pred HHHHHHHHHHHHHHhhcc----------cCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC---CcccHHHH
Q 001781 431 AVAMHDVGPLLIKYARRN----------SVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG---FNGDVNGV 497 (1013)
Q Consensus 431 dlLLeAfa~Ll~~~~~lk----------~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG---~~eDl~~l 497 (1013)
+.+++|+..+.......+ +..|+++ ++|+|+|+.. +++++++++++++ +|+|.+ +.+++..+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~-l~ivG~G~~~--~~l~~~~~~~~l~--~v~~~~~~~~~~~~~~~ 303 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPRLL-FIITGKGPQK--AMYEEKISRLNLR--HVAFRTMWLEAEDYPLL 303 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCCeE-EEEEeCCCCH--HHHHHHHHHcCCC--ceEEEcCCCCHHHHHHH
Confidence 999999988765433221 2247899 5699999976 9999999999998 477755 35899999
Q ss_pred HHHccEEEEccC-CCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHH
Q 001781 498 LLMADIVLYGSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566 (1013)
Q Consensus 498 LaaADIfVlPS~-~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL 566 (1013)
|+.||++|+|+. ...|+||++++||||||+|||+++.||.+|+|.++.+|++++ |+++++++|.+++
T Consensus 304 l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 304 LGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 999999998642 111389999999999999999999999999999999999997 7999999998874
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-23 Score=238.00 Aligned_cols=290 Identities=17% Similarity=0.189 Sum_probs=198.0
Q ss_pred HHHHHHHHCCCEEEEEEcCCCCchHHHHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEE
Q 001781 243 TVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWI 322 (1013)
Q Consensus 243 ~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~t 322 (1013)
-+.+.|+..|.+|.++.... .. ...+.. +..... ++..+.....-+.. +..++|+|++
T Consensus 18 ~~~~~l~~~~~~~~~~~~~~--~~---------~~~~~~-~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~v~e 75 (331)
T PHA01630 18 LLEEHLKMLGHKVTVFEKPT--LT---------KYQLPP-GYPIYI---YYTIFNSMLFWKGI-------PHVGKNIVFE 75 (331)
T ss_pred HHHHHHHHhCCeeEEEeccc--hh---------hhhcCC-CCceee---ehhhhhHHHHHhhc-------cccCCceEEE
Confidence 36788999999999986543 11 111222 222111 22222111111111 2246799999
Q ss_pred EcCCccccccchhhhhhHHHHHHHHHHH-hccccEEEEcCCCchhhh--ccCC-CCCEEEeCCCCCCcccccccCcchhH
Q 001781 323 IQEDSLANRLPVYVERGFQNLLSYWKSV-FSRVNVIVFPDYTLPMLY--SVLD-AGNFFVIPGSPADVWAVEAYSKSHEK 398 (1013)
Q Consensus 323 vHg~~l~~~l~~y~~~~l~klLs~~~~~-l~~AD~VI~~S~~~~~ly--~~l~-~~ki~VIPnggVDl~~~~~F~p~~~~ 398 (1013)
+|+.. .+ ...+.. .. .+.+|.+++++....... .+++ .+++.+|||+ +|. +.|.+....
T Consensus 76 ~~~~~--------~l---~~~~~~--~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNG-Vd~---~~f~~~~~~ 138 (331)
T PHA01630 76 VADTD--------AI---SHTALY--FFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHN-LNP---RMFEYKPKE 138 (331)
T ss_pred EEeec--------hh---hHHHHH--HHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCC-CCH---HHcCCCccc
Confidence 99831 11 111111 12 467999999998776653 2333 4689999996 887 666443211
Q ss_pred HHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHc
Q 001781 399 YQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL 478 (1013)
Q Consensus 399 ~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eL 478 (1013)
..+.++++++|++.+ .||++.+++|++.+.++. ++++| +++|++... ..+ .
T Consensus 139 ---------~~~~~vl~~~g~~~~----~Kg~d~Li~A~~~l~~~~-------~~~~l-livG~~~~~--~~l------~ 189 (331)
T PHA01630 139 ---------KPHPCVLAILPHSWD----RKGGDIVVKIFHELQNEG-------YDFYF-LIKSSNMLD--PRL------F 189 (331)
T ss_pred ---------cCCCEEEEEeccccc----cCCHHHHHHHHHHHHhhC-------CCEEE-EEEeCcccc--hhh------c
Confidence 124567777777755 799999999999886543 58884 588865533 211 1
Q ss_pred CCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcC------
Q 001781 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK------ 552 (1013)
Q Consensus 479 gL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p------ 552 (1013)
++. .+....+.+++..+|+.||++|+||..| +||++++||||||+|||+|+.||+.|++.++.+|+++++
T Consensus 190 ~~~--~~~~~v~~~~l~~~y~~aDv~v~pS~~E--~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~ 265 (331)
T PHA01630 190 GLN--GVKTPLPDDDIYSLFAGCDILFYPVRGG--AFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKL 265 (331)
T ss_pred ccc--ceeccCCHHHHHHHHHhCCEEEECCccc--cCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccc
Confidence 333 2323345689999999999999999987 999999999999999999999999999999999888753
Q ss_pred -------------CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 001781 553 -------------DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1013)
Q Consensus 553 -------------~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~ 604 (1013)
.|.+++++++.+++.+++..+.++.++.+++..+++|+|++++++|.++|++
T Consensus 266 ~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 266 WYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3788899999999987521022466677777799999999999999999975
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-24 Score=234.71 Aligned_cols=334 Identities=17% Similarity=0.171 Sum_probs=245.4
Q ss_pred EEEEEecccCC--CCceehHHHHHHHHHHCCCEEEEEEcCCCCch--------------------------HHHHHHHHH
Q 001781 224 RIGLILGNMAK--DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------------SLWEQIAGQ 275 (1013)
Q Consensus 224 RIalI~g~l~~--gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~--------------------------~~~r~i~~L 275 (1013)
+|++|.+-+.+ ||.+.....+.+.|-++||.|.+++...|... ..+..+.-+
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pll 81 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLL 81 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCccc
Confidence 57788877777 88899999999999999999999987544211 011222225
Q ss_pred HHHHhhcCccEEEEcCcchHHH-HHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccc
Q 001781 276 ISILGQEQYSLIDWSIFDGIIA-DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1013)
Q Consensus 276 i~lLk~~kpDIIh~~~~~~~lv-~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~A 354 (1013)
..++.+++..+||.|...+.+. ..+..... .+.++|+|-|.---..... . .+.. ......+...
T Consensus 82 r~i~lrE~I~ivhghs~fS~lahe~l~hart---------MGlktVfTdHSlfGfad~~---s-i~~n--~ll~~sL~~i 146 (426)
T KOG1111|consen 82 RPILLRERIEIVHGHSPFSYLAHEALMHART---------MGLKTVFTDHSLFGFADIG---S-ILTN--KLLPLSLANI 146 (426)
T ss_pred chhhhhhceEEEecCChHHHHHHHHHHHHHh---------cCceEEEeccccccccchh---h-hhhc--ceeeeeecCC
Confidence 5666677889999987665542 22222111 4578999988832111110 0 0000 0112245667
Q ss_pred cEEEEcCCCchhh---hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHH
Q 001781 355 NVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1013)
Q Consensus 355 D~VI~~S~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~d 431 (1013)
|.+||.++.-+.. ...+.+.++.+|||. ++. ..|.|..... -+.+...|+.++|+.. .||.|
T Consensus 147 d~~IcVshtskentvlr~~L~p~kvsvIPnA-v~~---~~f~P~~~~~-------~S~~i~~ivv~sRLvy----rKGiD 211 (426)
T KOG1111|consen 147 DRIICVSHTSKENTVLRGALAPAKVSVIPNA-VVT---HTFTPDAADK-------PSADIITIVVASRLVY----RKGID 211 (426)
T ss_pred CcEEEEeecCCCceEEEeccCHhHeeeccce-eec---cccccCcccc-------CCCCeeEEEEEeeeee----ccchH
Confidence 8888877655433 567888999999998 776 8887743221 1233478999999976 89999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC--CcccHHHHHHHccEEEEccC
Q 001781 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSS 509 (1013)
Q Consensus 432 lLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG--~~eDl~~lLaaADIfVlPS~ 509 (1013)
++++++.++.+++ |+++| +|+|+||.. ..++++.+++.+.+ +|.++| +.+++.+.|..-|||++||.
T Consensus 212 ll~~iIp~vc~~~-------p~vrf-ii~GDGPk~--i~lee~lEk~~l~~-rV~~lG~v~h~~Vr~vl~~G~IFlntSl 280 (426)
T KOG1111|consen 212 LLLEIIPSVCDKH-------PEVRF-IIIGDGPKR--IDLEEMLEKLFLQD-RVVMLGTVPHDRVRDVLVRGDIFLNTSL 280 (426)
T ss_pred HHHHHHHHHHhcC-------CCeeE-EEecCCccc--chHHHHHHHhhccC-ceEEecccchHHHHHHHhcCcEEeccHH
Confidence 9999999887665 79996 599999987 89999999999998 999999 55889999999999999999
Q ss_pred CCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HHHh
Q 001781 510 QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL-HAKN 588 (1013)
Q Consensus 510 ~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe-~ae~ 588 (1013)
.| .|+++++|||+||+|||++.+||++|++-++ -......++++++++++++++.-.. .-+.-.+ ..+.
T Consensus 281 TE--afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~------~p~~~h~~v~~~ 350 (426)
T KOG1111|consen 281 TE--AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRT------LPLEFHDRVKKM 350 (426)
T ss_pred HH--HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhcc------CchhHHHHHHHh
Confidence 98 9999999999999999999999999999864 2334556789999999998874321 1222333 3456
Q ss_pred hcHHHHHHHHHHHHHHHhcC
Q 001781 589 MLALDCVTRYARILENVLNF 608 (1013)
Q Consensus 589 fs~e~~~~~y~~Lye~lL~~ 608 (1013)
|.|++++++-.++|.++.+-
T Consensus 351 y~w~dVa~rTekvy~r~~~t 370 (426)
T KOG1111|consen 351 YSWKDVAERTEKVYDRAATT 370 (426)
T ss_pred ccHHHHHHHHHHHHHHHhhc
Confidence 88899999999999998753
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=229.54 Aligned_cols=335 Identities=16% Similarity=0.159 Sum_probs=220.1
Q ss_pred EEEEecccCCCCceehHHHHHHHHHHCCCE--EEEEEcCC-C-Cch------------HHHHHHHHHHHHHhhcCccEEE
Q 001781 225 IGLILGNMAKDSRSLLLITVVKNLQKLGYV--FKIYAVRS-G-NSH------------SLWEQIAGQISILGQEQYSLID 288 (1013)
Q Consensus 225 IalI~g~l~~gg~~l~vl~Lak~L~e~Gye--V~Vlt~~~-g-~~~------------~~~r~i~~Li~lLk~~kpDIIh 288 (1013)
|.+...+. |....+..+++.|++.+.+ |.+.+... + +.. .++.....+.++++..+||+++
T Consensus 53 iW~Ha~s~---Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~ 129 (425)
T PRK05749 53 IWFHAVSV---GETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVI 129 (425)
T ss_pred EEEEeCCH---HHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEE
Confidence 54444443 4667788899999887754 33332211 1 000 0011223367788999999998
Q ss_pred EcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhh
Q 001781 289 WSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY 368 (1013)
Q Consensus 289 ~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly 368 (1013)
++..... ...+..... .++|+|.+.|.... .....+ ..+....+..++.+|.|++.+......+
T Consensus 130 ~~~~~~~-~~~l~~~~~---------~~ip~vl~~~~~~~-~s~~~~-----~~~~~~~r~~~~~~d~ii~~S~~~~~~l 193 (425)
T PRK05749 130 IMETELW-PNLIAELKR---------RGIPLVLANARLSE-RSFKRY-----QKFKRFYRLLFKNIDLVLAQSEEDAERF 193 (425)
T ss_pred EEecchh-HHHHHHHHH---------CCCCEEEEeccCCh-hhHHHH-----HHHHHHHHHHHHhCCEEEECCHHHHHHH
Confidence 8754432 222222112 46888876443211 111011 1111122345778999999988776654
Q ss_pred c--cCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHh
Q 001781 369 S--VLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYA 445 (1013)
Q Consensus 369 ~--~l~~~ki~VIPnggVDl~~~~~F~p~-~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~ 445 (1013)
. +.+.+ +.+++|...|. ...... .....++..++ +++++|+++|+. .|+.+.+++|+..+.++.
T Consensus 194 ~~~g~~~~-i~vi~n~~~d~---~~~~~~~~~~~~~r~~~~--~~~~vil~~~~~------~~~~~~ll~A~~~l~~~~- 260 (425)
T PRK05749 194 LALGAKNE-VTVTGNLKFDI---EVPPELAARAATLRRQLA--PNRPVWIAASTH------EGEEELVLDAHRALLKQF- 260 (425)
T ss_pred HHcCCCCC-cEecccccccC---CCChhhHHHHHHHHHHhc--CCCcEEEEeCCC------chHHHHHHHHHHHHHHhC-
Confidence 3 34444 88888854443 221111 12345677776 456678888753 578899999999886554
Q ss_pred hcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCC------------CcEEEcCCcccHHHHHHHccEEEE-ccCCCC
Q 001781 446 RRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE------------HSVRHYGFNGDVNGVLLMADIVLY-GSSQVE 512 (1013)
Q Consensus 446 ~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~d------------g~V~FlG~~eDl~~lLaaADIfVl-PS~~EE 512 (1013)
|+++ ++|+|.|+++ .++++++++++|+.. ..|.+.+..+++..+|+.||++++ +|..|
T Consensus 261 ------~~~~-liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e- 331 (425)
T PRK05749 261 ------PNLL-LILVPRHPER-FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVK- 331 (425)
T ss_pred ------CCcE-EEEcCCChhh-HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCC-
Confidence 6888 6799998864 368999999999851 134444455789999999999666 56656
Q ss_pred CCccHHHHHHHHhCCCEEEcCC-CCchhhhccC-CeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhc
Q 001781 513 QGFPSLIVRAMTFGIPVITPDF-PIIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML 590 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIASdv-gGi~EiI~dG-~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs 590 (1013)
++|.+++|||+||+|||+++. ++..|+++.. ++|++++++|+++++++|.++++|++. +++|+++|++.+++..
T Consensus 332 -~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~---~~~m~~~a~~~~~~~~ 407 (425)
T PRK05749 332 -RGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDA---RQAYGEAGVAFLKQNQ 407 (425)
T ss_pred -CCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHhCc
Confidence 899999999999999999764 5666665542 468888889999999999999999876 4899999999887663
Q ss_pred HHHHHHHHHHHHHHHh
Q 001781 591 ALDCVTRYARILENVL 606 (1013)
Q Consensus 591 ~e~~~~~y~~Lye~lL 606 (1013)
...+++.+++...+
T Consensus 408 --~~~~~~~~~l~~~l 421 (425)
T PRK05749 408 --GALQRTLQLLEPYL 421 (425)
T ss_pred --cHHHHHHHHHHHhc
Confidence 55567777776654
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=223.19 Aligned_cols=297 Identities=13% Similarity=0.041 Sum_probs=203.4
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCC
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPF 314 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~ 314 (1013)
.....+.-++++.|++.|--|++++....-. +..--+|..-..++.+-..+.....+ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 68 (335)
T PHA01633 11 SSISNVSEDIAEVLRENGEIVTITKNPFYIP---------------KAEKLIVFIPFHPPSLNPYLYAYYQF-------K 68 (335)
T ss_pred hhhhhHHHHHHHHHHhCCcEEEEecCCcccC---------------ccceEEEEeecCCcccchHHhhhhhh-------c
Confidence 3444566778999999998888875533111 01111333322223333333332221 1
Q ss_pred CCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhc--cCCCCCEEEeCCCCCCccccccc
Q 001781 315 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS--VLDAGNFFVIPGSPADVWAVEAY 392 (1013)
Q Consensus 315 ~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~--~l~~~ki~VIPnggVDl~~~~~F 392 (1013)
...|++.++|+..-. .. +...+.+.+.+|+.|...+.... +++.. .+|+++ +|+ +.|
T Consensus 69 ~~~~~~tt~~g~~~~------------~~---y~~~m~~~~~vIavS~~t~~~L~~~G~~~~--i~I~~G-VD~---~~f 127 (335)
T PHA01633 69 GKKYFYTTCDGIPNI------------EI---VNKYLLQDVKFIPNSKFSAENLQEVGLQVD--LPVFHG-INF---KIV 127 (335)
T ss_pred CCCceEEeeCCcCch------------HH---HHHHHhcCCEEEeCCHHHHHHHHHhCCCCc--eeeeCC-CCh---hhc
Confidence 346789998886311 11 22233345678888866655432 33332 346774 887 778
Q ss_pred Ccch-hHHHHHHHcCCC-CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHH
Q 001781 393 SKSH-EKYQLRKENGFL-KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDA 470 (1013)
Q Consensus 393 ~p~~-~~~~~R~~lgi~-~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~ 470 (1013)
.+.. ....++++++.. ++.++|+++||+.+ +||++.+++|++.+.++.+... .+++ ++++|. .
T Consensus 128 ~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~----~KG~~~LI~A~~~L~~~~p~~~---~~i~-l~ivG~------~- 192 (335)
T PHA01633 128 ENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTK----RKNMDLMLQVFNELNTKYPDIA---KKIH-FFVISH------K- 192 (335)
T ss_pred CccchhhHHHHHHhCcCCCCCeEEEEEeCCcc----ccCHHHHHHHHHHHHHhCCCcc---ccEE-EEEEcH------H-
Confidence 6643 234567777654 46789999999976 8999999999999876542110 1467 456663 1
Q ss_pred HHHHHHHcCCCCCcEEEcC-----CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--
Q 001781 471 LQEVASRLGLLEHSVRHYG-----FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE-- 543 (1013)
Q Consensus 471 Lkela~eLgL~dg~V~FlG-----~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d-- 543 (1013)
..+++++.+ +|+|+| ..+++..+|+.||++|+||..| +||++++||||||+|||+++.++++|++.+
T Consensus 193 ---~~~~l~l~~-~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~E--gfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~ 266 (335)
T PHA01633 193 ---QFTQLEVPA-NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTE--GFGMPVLESMAMGTPVIHQLMPPLDEFTSWQW 266 (335)
T ss_pred ---HHHHcCCCC-cEEEEecCCCCCHHHHHHHHHhCCEEEECCccc--cCCHHHHHHHHcCCCEEEccCCCceeecCCcc
Confidence 235577887 899995 2478999999999999999998 999999999999999999999999886542
Q ss_pred ----------------CCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHH
Q 001781 544 ----------------GAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYA 599 (1013)
Q Consensus 544 ----------------G~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~ 599 (1013)
..+|++++..|+++++++|..++...+. ..++.++++.+++|.|++.+++|.
T Consensus 267 ~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~----~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 267 NLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDR----EERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred ceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccCh----hhhhHHHHHHHHhcCHHHHHHHhh
Confidence 2357788889999999999999776542 445778899999999999998875
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-21 Score=219.95 Aligned_cols=305 Identities=16% Similarity=0.160 Sum_probs=215.2
Q ss_pred EEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------------------H-------H---HHHHH
Q 001781 225 IGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------------S-------L---WEQIA 273 (1013)
Q Consensus 225 IalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~---------------------~-------~---~r~i~ 273 (1013)
|++..+.. +|.....+.+++.|.+.||+|.+++...+... . . ...+.
T Consensus 2 ~~~~~~~~--gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (350)
T cd03785 2 ILIAGGGT--GGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVL 79 (350)
T ss_pred EEEEecCc--hhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHH
Confidence 44554444 57777888999999999999999976432100 0 0 12223
Q ss_pred HHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhcc
Q 001781 274 GQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1013)
Q Consensus 274 ~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~ 353 (1013)
.+.+++++.+||+||++.....+...++++. .++|+|++.|+.. . ....++ .++.
T Consensus 80 ~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~----------~~~p~v~~~~~~~-~------------~~~~~~--~~~~ 134 (350)
T cd03785 80 QARKILKKFKPDVVVGFGGYVSGPVGLAAKL----------LGIPLVIHEQNAV-P------------GLANRL--LARF 134 (350)
T ss_pred HHHHHHHhcCCCEEEECCCCcchHHHHHHHH----------hCCCEEEEcCCCC-c------------cHHHHH--HHHh
Confidence 4667788899999999875544444444443 3578887544421 0 011122 2345
Q ss_pred ccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHH-H
Q 001781 354 VNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA-V 432 (1013)
Q Consensus 354 AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~d-l 432 (1013)
+|.+++.+...... .+..++.+|+|+ +|. +.+.+.. . +.+++++++.++|+++|+... .|+.. .
T Consensus 135 ~~~vi~~s~~~~~~---~~~~~~~~i~n~-v~~---~~~~~~~---~-~~~~~~~~~~~~i~~~~g~~~----~~~~~~~ 199 (350)
T cd03785 135 ADRVALSFPETAKY---FPKDKAVVTGNP-VRE---EILALDR---E-RARLGLRPGKPTLLVFGGSQG----ARAINEA 199 (350)
T ss_pred hCEEEEcchhhhhc---CCCCcEEEECCC-Cch---HHhhhhh---h-HHhcCCCCCCeEEEEECCcHh----HHHHHHH
Confidence 88999887765543 456789999986 775 5453321 1 677888888888888886533 35554 4
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCC
Q 001781 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 433 LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EE 512 (1013)
+++++..+.. +++++++++|++ . .+.+++.++++ .+ +|++.|+.+++..+|+.||++|++|
T Consensus 200 l~~a~~~l~~---------~~~~~~~i~G~g-~--~~~l~~~~~~~--~~-~v~~~g~~~~~~~~l~~ad~~v~~s---- 260 (350)
T cd03785 200 VPEALAELLR---------KRLQVIHQTGKG-D--LEEVKKAYEEL--GV-NYEVFPFIDDMAAAYAAADLVISRA---- 260 (350)
T ss_pred HHHHHHHhhc---------cCeEEEEEcCCc-c--HHHHHHHHhcc--CC-CeEEeehhhhHHHHHHhcCEEEECC----
Confidence 4577666531 356666688888 3 37888888866 44 8999998899999999999999765
Q ss_pred CCccHHHHHHHHhCCCEEEcCCCC--------chhhhccCCeEEEEcCC--CHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001781 513 QGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIASdvgG--------i~EiI~dG~~G~Lv~p~--D~eeLAeAI~~LL~d~elR~~~~~Mg~aA 582 (1013)
+ +++++|||++|+|||+++.++ ..+.+.+..+|++++++ |+++++++|.+++++++. +++|++++
T Consensus 261 -g-~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~ 335 (350)
T cd03785 261 -G-ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPER---LKAMAEAA 335 (350)
T ss_pred -C-HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHH---HHHHHHHH
Confidence 2 579999999999999987654 24667777899999987 899999999999988765 58999999
Q ss_pred HHHHHhhcHHHHH
Q 001781 583 RLHAKNMLALDCV 595 (1013)
Q Consensus 583 Re~ae~fs~e~~~ 595 (1013)
++.++.+..++++
T Consensus 336 ~~~~~~~~~~~i~ 348 (350)
T cd03785 336 RSLARPDAAERIA 348 (350)
T ss_pred HhcCCCCHHHHHH
Confidence 9888766666554
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-21 Score=228.36 Aligned_cols=302 Identities=13% Similarity=0.123 Sum_probs=199.8
Q ss_pred cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccc-----hhh-hh-----------hHHHHH
Q 001781 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP-----VYV-ER-----------GFQNLL 344 (1013)
Q Consensus 282 ~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~-----~y~-~~-----------~l~klL 344 (1013)
.++|++|+|.+.........++.. ..+|+|+|+|...+...+. .|. +. .+....
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~---------~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~ 217 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRK---------VDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRY 217 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhC---------CCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHH
Confidence 579999999998887776666443 4689999999755443210 110 00 001111
Q ss_pred HHHHHHhccccEEEEcCCCchhh---hccCCCCCEEEeCCCCCCcccccccCcchh----------------HHHHHHHc
Q 001781 345 SYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSKSHE----------------KYQLRKEN 405 (1013)
Q Consensus 345 s~~~~~l~~AD~VI~~S~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p~~~----------------~~~~R~~l 405 (1013)
..-......||.++++|..+... ..+.++++ ||||| +|. +.|.+..+ +..++..+
T Consensus 218 ~iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNG-id~---~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~ 291 (590)
T cd03793 218 CIERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNG-LNV---KKFSALHEFQNLHAQSKEKINEFVRGHFYGHY 291 (590)
T ss_pred HHHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCC-cch---hhcccchhhhhhhHHhhhhhhHHHHHHHhhhc
Confidence 11122445699999999877655 22444444 99997 877 77755331 22356677
Q ss_pred CCCCCcEEEEE-EccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc---------ccHHHHHH--
Q 001781 406 GFLKDEIVVVV-VGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---------GYNDALQE-- 473 (1013)
Q Consensus 406 gi~~d~~vIL~-VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e---------~Y~e~Lke-- 473 (1013)
++++++.+++| +||+.. .+||.+.+|+|++++............=+-|+++-+.... ...+.|++
T Consensus 292 ~~~~d~tli~f~~GR~e~---~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~ 368 (590)
T cd03793 292 DFDLDKTLYFFTAGRYEF---SNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTV 368 (590)
T ss_pred CCCCCCeEEEEEeecccc---ccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHH
Confidence 88878888877 799732 2799999999999997765432221112335444333110 00011111
Q ss_pred -----------------------------------------------------------------HHHHcCCCC-----C
Q 001781 474 -----------------------------------------------------------------VASRLGLLE-----H 483 (1013)
Q Consensus 474 -----------------------------------------------------------------la~eLgL~d-----g 483 (1013)
.+++++|.+ .
T Consensus 369 ~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drV 448 (590)
T cd03793 369 NSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRV 448 (590)
T ss_pred HHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeE
Confidence 112222322 1
Q ss_pred cEEEcC---------CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCc----hhhhccC-CeEEE
Q 001781 484 SVRHYG---------FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII----KEYVAEG-AQVIF 549 (1013)
Q Consensus 484 ~V~FlG---------~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi----~EiI~dG-~~G~L 549 (1013)
+|+|+. ...+..++|+.||++|+||++| |||++++||||||+|||+|+.+|. .|++.++ ..|++
T Consensus 449 kvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE--~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~ 526 (590)
T cd03793 449 KVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYE--PWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIY 526 (590)
T ss_pred EEEEcccccCCCCCcCCcchHHHhhhceEEEeccccC--CCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEE
Confidence 255665 1234789999999999999998 999999999999999999999988 6666655 35777
Q ss_pred Ec-------CCCHHHHHHHHHHHHhCcccHHHHHHHHHHHH--HHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 550 FQ-------KDNPEGLSRAFSLFISNGKLSKFARTVASAGR--LHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 550 v~-------p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aAR--e~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
+. +.++++++++|.++++. +. ++.+.++++ +.++.|.|++++..|.+.|..+++
T Consensus 527 V~~r~~~~~~e~v~~La~~m~~~~~~-~~---r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 527 IVDRRFKSPDESVQQLTQYMYEFCQL-SR---RQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred EecCCccchHHHHHHHHHHHHHHhCC-cH---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 75 45688999999999854 43 355555555 789999999999999999987764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-21 Score=217.39 Aligned_cols=313 Identities=15% Similarity=0.113 Sum_probs=220.8
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch-------------------------------HHHHH
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------SLWEQ 271 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-------------------------------~~~r~ 271 (1013)
+||+++.+.. +|...+.+++++.|.+.||+|.+++...+... ..+..
T Consensus 2 ~~i~i~~~g~--gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (357)
T PRK00726 2 KKILLAGGGT--GGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLKG 79 (357)
T ss_pred cEEEEEcCcc--hHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHHHHH
Confidence 5677776544 46667888999999999999999977442100 01233
Q ss_pred HHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHh
Q 001781 272 IAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVF 351 (1013)
Q Consensus 272 i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l 351 (1013)
+..+.+++++.+||+||++.....+...++.+. .++|+|++.|+.. . ....++ .+
T Consensus 80 ~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~----------~~~p~v~~~~~~~-~------------~~~~r~--~~ 134 (357)
T PRK00726 80 VLQARKILKRFKPDVVVGFGGYVSGPGGLAARL----------LGIPLVIHEQNAV-P------------GLANKL--LA 134 (357)
T ss_pred HHHHHHHHHhcCCCEEEECCCcchhHHHHHHHH----------cCCCEEEEcCCCC-c------------cHHHHH--HH
Confidence 344677888899999999986555555554433 4589998765421 0 011222 23
Q ss_pred ccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHH
Q 001781 352 SRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1013)
Q Consensus 352 ~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~d 431 (1013)
+.+|.+++.+... ... .+..++.+|||+ ++. +.+.+.. .+.+++++++.++|+++|+... .|+..
T Consensus 135 ~~~d~ii~~~~~~--~~~-~~~~~i~vi~n~-v~~---~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~----~~~~~ 199 (357)
T PRK00726 135 RFAKKVATAFPGA--FPE-FFKPKAVVTGNP-VRE---EILALAA----PPARLAGREGKPTLLVVGGSQG----ARVLN 199 (357)
T ss_pred HHhchheECchhh--hhc-cCCCCEEEECCC-CCh---Hhhcccc----hhhhccCCCCCeEEEEECCcHh----HHHHH
Confidence 4577877766532 122 567899999996 775 4443221 2235677777888899987644 45554
Q ss_pred HHH-HHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCC
Q 001781 432 VAM-HDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 510 (1013)
Q Consensus 432 lLL-eAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~ 510 (1013)
.++ +|+.++.+. + .. ++++|+++. +.+++..+ +++ +|++.|+.+++..+|+.||+++++|
T Consensus 200 ~~l~~a~~~~~~~--------~-~~-~~~~G~g~~---~~~~~~~~-~~~---~v~~~g~~~~~~~~~~~~d~~i~~~-- 260 (357)
T PRK00726 200 EAVPEALALLPEA--------L-QV-IHQTGKGDL---EEVRAAYA-AGI---NAEVVPFIDDMAAAYAAADLVICRA-- 260 (357)
T ss_pred HHHHHHHHHhhhC--------c-EE-EEEcCCCcH---HHHHHHhh-cCC---cEEEeehHhhHHHHHHhCCEEEECC--
Confidence 444 777666321 2 33 568899874 45555455 665 3999999999999999999999864
Q ss_pred CCCCccHHHHHHHHhCCCEEEcCCCC--------chhhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHH
Q 001781 511 VEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVAS 580 (1013)
Q Consensus 511 EEEGFGivVLEAMA~G~PVIASdvgG--------i~EiI~dG~~G~Lv~p~D--~eeLAeAI~~LL~d~elR~~~~~Mg~ 580 (1013)
| +.+++|||+||+|||+++.++ ..+.+.+..+|++++++| +++++++|.++++|+++ +++|++
T Consensus 261 ---g-~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~ 333 (357)
T PRK00726 261 ---G-ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPER---LEAMAE 333 (357)
T ss_pred ---C-HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHH---HHHHHH
Confidence 2 689999999999999987643 236677778999999888 99999999999999876 489999
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHH
Q 001781 581 AGRLHAKNMLALDCVTRYARILE 603 (1013)
Q Consensus 581 aARe~ae~fs~e~~~~~y~~Lye 603 (1013)
++++.++++..+++++.+.++.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 334 AARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999988988988888877653
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=230.46 Aligned_cols=285 Identities=11% Similarity=0.042 Sum_probs=195.8
Q ss_pred CccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCC
Q 001781 283 QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY 362 (1013)
Q Consensus 283 kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~ 362 (1013)
..|+|+.|.|+..++..+..+.. ...|+++..|-.-..... .........++ ..+-.+|.+.|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~---------~~~~i~~f~HipfP~~e~-~~~lp~~~~ll----~~~l~~D~igF~t~ 196 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG---------PDARIGFFLHIPFPSSEI-FRCLPWREELL----RGLLGADLIGFQTE 196 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC---------CCCeEEEEEeCCCCChHH-HhhCCChHHHH----HHHhcCCEEEECCH
Confidence 45799999999888887776543 457899998864211111 11111111111 12334667666543
Q ss_pred Cchhh-h------------------ccCCCCCEEEeCCCCCCcccccccCcchh----HHHHHHHcCCCCCcEEEEEEcc
Q 001781 363 TLPML-Y------------------SVLDAGNFFVIPGSPADVWAVEAYSKSHE----KYQLRKENGFLKDEIVVVVVGS 419 (1013)
Q Consensus 363 ~~~~l-y------------------~~l~~~ki~VIPnggVDl~~~~~F~p~~~----~~~~R~~lgi~~d~~vIL~VGR 419 (1013)
..... . ..-...++.+||++ ||. +.|.+... ....++..+..+++++|+++||
T Consensus 197 ~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~G-ID~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgR 272 (460)
T cd03788 197 RYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIG-IDP---DAFRKLAASPEVQERAAELRERLGGRKLIVGVDR 272 (460)
T ss_pred HHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCe-EcH---HHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecC
Confidence 32211 0 00112458899996 887 77754221 2223334456678889999999
Q ss_pred CCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCC-----Cc--ccHHHHHHHHHHcCCCC-----CcEEE
Q 001781 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS-----TD--GYNDALQEVASRLGLLE-----HSVRH 487 (1013)
Q Consensus 420 l~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G-----~e--~Y~e~Lkela~eLgL~d-----g~V~F 487 (1013)
+.+ .||++.+++|+..++++.++.+ .++++ +++|.+ +. .+.+.+++++++++..- ..|++
T Consensus 273 l~~----~Kgi~~ll~A~~~ll~~~p~~~---~~v~L-v~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~ 344 (460)
T cd03788 273 LDY----SKGIPERLLAFERLLERYPEWR---GKVVL-VQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRY 344 (460)
T ss_pred ccc----cCCHHHHHHHHHHHHHhChhhc---CCEEE-EEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEE
Confidence 977 8999999999999887653221 14674 455532 21 13344455555443210 03555
Q ss_pred c-C--CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCC----EEEcCCCCchhhhccCCeEEEEcCCCHHHHHH
Q 001781 488 Y-G--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1013)
Q Consensus 488 l-G--~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~P----VIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAe 560 (1013)
. | ..+++..+|+.||++|+||..| |||++++||||||+| ||+|+.+|..+. +.+|++++|.|++++++
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~E--g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ 419 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRD--GMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVAD 419 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCcccc--ccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHH
Confidence 4 5 5688999999999999999998 999999999999999 999998888776 36799999999999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 001781 561 AFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYAR 600 (1013)
Q Consensus 561 AI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~ 600 (1013)
+|.++++++. ++++++++++++.+++|++...+++|..
T Consensus 420 ai~~~l~~~~--~e~~~~~~~~~~~v~~~~~~~w~~~~l~ 457 (460)
T cd03788 420 AIHRALTMPL--EERRERHRKLREYVRTHDVQAWANSFLD 457 (460)
T ss_pred HHHHHHcCCH--HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999886 3468889999999999999999988764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=214.56 Aligned_cols=304 Identities=17% Similarity=0.138 Sum_probs=207.6
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc-----------h--------------------HHHHHH
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-----------H--------------------SLWEQI 272 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~-----------~--------------------~~~r~i 272 (1013)
+|.++.|..+ |.......+++.|.+.||+|.+++...+.. . ..+..+
T Consensus 2 ~i~~~~g~~~--g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 79 (348)
T TIGR01133 2 KVVLAAGGTG--GHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLKAV 79 (348)
T ss_pred eEEEEeCccH--HHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHHHH
Confidence 6777777664 222245689999999999999997522100 0 011233
Q ss_pred HHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhc
Q 001781 273 AGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFS 352 (1013)
Q Consensus 273 ~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~ 352 (1013)
..+.+++++.+||+||++.....+...++++. .++|+|+..++. . . ....+| .++
T Consensus 80 ~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~----------~~~p~v~~~~~~--~-----~------~~~~~~--~~~ 134 (348)
T TIGR01133 80 FQARRILKKFKPDAVIGFGGYVSGPAGLAAKL----------LGIPLFHHEQNA--V-----P------GLTNKL--LSR 134 (348)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccHHHHHHHHH----------cCCCEEEECCCC--C-----c------cHHHHH--HHH
Confidence 34677888899999999865554555544433 347887543321 0 0 011222 234
Q ss_pred cccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHH
Q 001781 353 RVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432 (1013)
Q Consensus 353 ~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dl 432 (1013)
.+|.+++.+......+ +..+|+|+ ++. ..+.+.. .+..++++++.++|+++|+... .|++..
T Consensus 135 ~~d~ii~~~~~~~~~~------~~~~i~n~-v~~---~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~----~~~~~~ 196 (348)
T TIGR01133 135 FAKKVLISFPGAKDHF------EAVLVGNP-VRQ---EIRSLPV----PRERFGLREGKPTILVLGGSQG----AKILNE 196 (348)
T ss_pred HhCeeEECchhHhhcC------CceEEcCC-cCH---HHhcccc----hhhhcCCCCCCeEEEEECCchh----HHHHHH
Confidence 5888888887655433 33788886 765 3333221 1335788888889999987533 466543
Q ss_pred -HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCC
Q 001781 433 -AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQV 511 (1013)
Q Consensus 433 -LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~E 511 (1013)
+++|+..+.+ .++++++++|++.. +.+++.++++++.+ .|.|. .. ++..+|+.||++|.+|
T Consensus 197 ~l~~a~~~l~~---------~~~~~~~~~g~~~~---~~l~~~~~~~~l~~-~v~~~-~~-~~~~~l~~ad~~v~~~--- 258 (348)
T TIGR01133 197 LVPKALAKLAE---------KGIQIVHQTGKNDL---EKVKNVYQELGIEA-IVTFI-DE-NMAAAYAAADLVISRA--- 258 (348)
T ss_pred HHHHHHHHHhh---------cCcEEEEECCcchH---HHHHHHHhhCCceE-EecCc-cc-CHHHHHHhCCEEEECC---
Confidence 4567665532 24565556666542 78888888888864 56666 33 8999999999999863
Q ss_pred CCCccHHHHHHHHhCCCEEEcCCCC-------chhhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001781 512 EQGFPSLIVRAMTFGIPVITPDFPI-------IKEYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVASAG 582 (1013)
Q Consensus 512 EEGFGivVLEAMA~G~PVIASdvgG-------i~EiI~dG~~G~Lv~p~D--~eeLAeAI~~LL~d~elR~~~~~Mg~aA 582 (1013)
| |++++|||++|+|+|+++.++ ..+++.++.+|++++++| +++++++|.++++|++. +++|++++
T Consensus 259 --g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~~~ 332 (348)
T TIGR01133 259 --G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPAN---LEAMAEAA 332 (348)
T ss_pred --C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHH---HHHHHHHH
Confidence 3 789999999999999998754 346788889999998876 99999999999998876 48899999
Q ss_pred HHHHHhhcHHHHHH
Q 001781 583 RLHAKNMLALDCVT 596 (1013)
Q Consensus 583 Re~ae~fs~e~~~~ 596 (1013)
++++++...+++++
T Consensus 333 ~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 333 RKLAKPDAAKRIAE 346 (348)
T ss_pred HhcCCccHHHHHHh
Confidence 88877776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.6e-21 Score=222.16 Aligned_cols=288 Identities=10% Similarity=0.040 Sum_probs=199.4
Q ss_pred hhcCc-cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 280 GQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 280 k~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
+..++ |+|..|.|+-.++..+..+.. ...++.+..|-. ++..-....+..-.. ....+-.+|.|-
T Consensus 123 ~~~~~~d~vwvhDYhl~l~p~~lr~~~---------~~~~igfFlHip-fP~~e~f~~lp~r~~----il~gll~~dlig 188 (456)
T TIGR02400 123 PLLQPGDIVWVHDYHLMLLPAMLRELG---------VQNKIGFFLHIP-FPSSEIYRTLPWRRE----LLEGLLAYDLVG 188 (456)
T ss_pred HhCCCCCEEEEecchhhHHHHHHHhhC---------CCCeEEEEEeCC-CCChHHHhhCCcHHH----HHHHHhcCCEEE
Confidence 33444 599999999999998887665 346788887853 221111111111122 222345688888
Q ss_pred EcCCCchhhh------------------ccCCCCCEEEeCCCCCCcccccccCcchh-------HHHHHHHcCCCCCcEE
Q 001781 359 FPDYTLPMLY------------------SVLDAGNFFVIPGSPADVWAVEAYSKSHE-------KYQLRKENGFLKDEIV 413 (1013)
Q Consensus 359 ~~S~~~~~ly------------------~~l~~~ki~VIPnggVDl~~~~~F~p~~~-------~~~~R~~lgi~~d~~v 413 (1013)
|.++.....+ ..-...++.++|++ ||+ +.|.+... ...+|++++ ++++
T Consensus 189 F~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~G-ID~---~~f~~~~~~~~~~~~~~~lr~~~~---~~~v 261 (456)
T TIGR02400 189 FQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIG-IDV---DRFAEQAKKPSVQKRIAELRESLK---GRKL 261 (456)
T ss_pred ECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCc-CCH---HHHHHHhcChhHHHHHHHHHHHcC---CCeE
Confidence 8655443220 01123457789997 887 77743211 123555553 6779
Q ss_pred EEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcC--CCcccHHHHHHHHHHc----C----CCC-
Q 001781 414 VVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN--STDGYNDALQEVASRL----G----LLE- 482 (1013)
Q Consensus 414 IL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~--G~e~Y~e~Lkela~eL----g----L~d- 482 (1013)
|++|||+.+ .||+..+++|++.++++.++.. .++.+++++|. +.....+.+++.++++ + ..+
T Consensus 262 Il~VgRLd~----~KGi~~ll~A~~~ll~~~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~ 334 (456)
T TIGR02400 262 IIGVDRLDY----SKGLPERLLAFERFLEEHPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDW 334 (456)
T ss_pred EEEcccccc----ccCHHHHHHHHHHHHHhCcccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999966 8999999999999987653221 14665544432 1111235566666554 1 110
Q ss_pred CcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCC----EEEcCCCCchhhhccCCeEEEEcCCCH
Q 001781 483 HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQKDNP 555 (1013)
Q Consensus 483 g~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~P----VIASdvgGi~EiI~dG~~G~Lv~p~D~ 555 (1013)
.-|++.+ ..+++..+|++||++|+||..| |||++++||||||+| ||+|+.+|..+.+. +|++++|.|+
T Consensus 335 ~pv~~l~~~~~~~el~aly~aaDv~vv~S~~E--G~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~ 409 (456)
T TIGR02400 335 TPIRYLNRSYDREELMALYRAADVGLVTPLRD--GMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDI 409 (456)
T ss_pred ccEEEEcCCCCHHHHHHHHHhCcEEEECcccc--ccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCH
Confidence 0144444 4588999999999999999998 999999999999999 99999998888774 6999999999
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 001781 556 EGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1013)
Q Consensus 556 eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Ly 602 (1013)
+++|++|.++++++. ++++++.+++++.+.++++...++.|.+-+
T Consensus 410 ~~lA~aI~~aL~~~~--~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 410 DGMADAIARALTMPL--EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHHcCCH--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 999999999999876 456888889999999999999998877543
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=196.13 Aligned_cols=169 Identities=20% Similarity=0.326 Sum_probs=148.0
Q ss_pred HHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHH
Q 001781 398 KYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR 477 (1013)
Q Consensus 398 ~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~e 477 (1013)
++..+...+.+.++++|+++||+.+ .||++.+++|+..+..+.. ++++ ++|+|.+.. ...++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~----~K~~~~li~a~~~l~~~~~------~~~~-l~i~G~~~~--~~~~~~~~~~ 68 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDP----EKGIDLLIEAFKKLKEKKN------PNYK-LVIVGDGEY--KKELKNLIEK 68 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSG----GGTHHHHHHHHHHHHHHHH------TTEE-EEEESHCCH--HHHHHHHHHH
T ss_pred hHHHHHHcCCCCCCeEEEEEecCcc----ccCHHHHHHHHHHHHhhcC------CCeE-EEEEccccc--cccccccccc
Confidence 4567788888899999999999866 7999999999999876411 5788 679996664 4889999999
Q ss_pred cCCCCCcEEEcCCcc--cHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCH
Q 001781 478 LGLLEHSVRHYGFNG--DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNP 555 (1013)
Q Consensus 478 LgL~dg~V~FlG~~e--Dl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~ 555 (1013)
+++.+ +|+|+|... ++..+|+.||++|+||..| +||.+++|||+||+|||+++.++..|++.++.+|+++++.|+
T Consensus 69 ~~~~~-~i~~~~~~~~~~l~~~~~~~di~v~~s~~e--~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~ 145 (172)
T PF00534_consen 69 LNLKE-NIIFLGYVPDDELDELYKSSDIFVSPSRNE--GFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDI 145 (172)
T ss_dssp TTCGT-TEEEEESHSHHHHHHHHHHTSEEEE-BSSB--SS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSH
T ss_pred ccccc-cccccccccccccccccccceecccccccc--ccccccccccccccceeeccccCCceeeccccceEEeCCCCH
Confidence 99987 999999665 8999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001781 556 EGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1013)
Q Consensus 556 eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ 585 (1013)
++++++|.+++++++. ++.|+++++++
T Consensus 146 ~~l~~~i~~~l~~~~~---~~~l~~~~~~~ 172 (172)
T PF00534_consen 146 EELADAIEKLLNDPEL---RQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHH---HHHHHHHhcCC
Confidence 9999999999999976 49999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-20 Score=210.69 Aligned_cols=323 Identities=10% Similarity=0.106 Sum_probs=217.8
Q ss_pred CCCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCC---C-----c-----------hHHHH-----------
Q 001781 221 RPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG---N-----S-----------HSLWE----------- 270 (1013)
Q Consensus 221 r~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g---~-----~-----------~~~~r----------- 270 (1013)
+.+||++++.++ .+|-......++++|++.|+++.++..... + . ...|.
T Consensus 3 ~~~rili~t~~~-G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 81 (380)
T PRK13609 3 KNPKVLILTAHY-GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIYD 81 (380)
T ss_pred CCCeEEEEEcCC-CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccc
Confidence 467899999887 446667777899999999998655532110 0 0 00010
Q ss_pred ----------HHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhH
Q 001781 271 ----------QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGF 340 (1013)
Q Consensus 271 ----------~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l 340 (1013)
....+.+++++.+||+|+++..... +..+..... .++|++..+++......
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~-~~~~~~~~~---------~~ip~~~~~td~~~~~~--------- 142 (380)
T PRK13609 82 KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VPELKKQTG---------ISIPTYNVLTDFCLHKI--------- 142 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH-HHHHHHhcC---------CCCCeEEEeCCCCCCcc---------
Confidence 0133667888899999998643332 222222211 46888866554321100
Q ss_pred HHHHHHHHHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEE-EEEE
Q 001781 341 QNLLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIV-VVVV 417 (1013)
Q Consensus 341 ~klLs~~~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~v-IL~V 417 (1013)
| .++.+|.+++.+......+ .+++.+++.++++. ++. .|.+......++.++++++++++ +++.
T Consensus 143 ------~--~~~~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~p-~~~----~f~~~~~~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 143 ------W--VHREVDRYFVATDHVKKVLVDIGVPPEQVVETGIP-IRS----SFELKINPDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred ------c--ccCCCCEEEECCHHHHHHHHHcCCChhHEEEECcc-cCh----HHcCcCCHHHHHHHcCCCCCCcEEEEEc
Confidence 1 2457899999887665543 35666788887553 432 23222224457888999876554 4455
Q ss_pred ccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHH
Q 001781 418 GSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497 (1013)
Q Consensus 418 GRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~l 497 (1013)
|++.. .|++..+++++... +++++++++|.+.. +.+.+++++++++ + +|+|+|+.+++..+
T Consensus 210 G~~~~----~k~~~~li~~l~~~-----------~~~~~viv~G~~~~-~~~~l~~~~~~~~--~-~v~~~g~~~~~~~l 270 (380)
T PRK13609 210 GAHGV----LGNVKELCQSLMSV-----------PDLQVVVVCGKNEA-LKQSLEDLQETNP--D-ALKVFGYVENIDEL 270 (380)
T ss_pred CCCCC----CcCHHHHHHHHhhC-----------CCcEEEEEeCCCHH-HHHHHHHHHhcCC--C-cEEEEechhhHHHH
Confidence 66533 58888888776421 47886655665432 2477888777655 4 79999999999999
Q ss_pred HHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC-CCCc----hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccH
Q 001781 498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPII----KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572 (1013)
Q Consensus 498 LaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd-vgGi----~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR 572 (1013)
|+.||++|. + +.|++++|||+||+|||+++ .+|. .+++. ++|+.+...|+++++++|.++++|++.
T Consensus 271 ~~~aD~~v~----~--~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~~~~~~l~~~i~~ll~~~~~- 341 (380)
T PRK13609 271 FRVTSCMIT----K--PGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVIRDDEEVFAKTEALLQDDMK- 341 (380)
T ss_pred HHhccEEEe----C--CCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEECCHHHHHHHHHHHHCCHHH-
Confidence 999999884 3 55899999999999999986 5653 23444 245555567999999999999999876
Q ss_pred HHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHh
Q 001781 573 KFARTVASAGRLHAKNMLALDCVTRYARILENVL 606 (1013)
Q Consensus 573 ~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL 606 (1013)
+++|++++++..+.+.++++++.+.+++...-
T Consensus 342 --~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~ 373 (380)
T PRK13609 342 --LLQMKEAMKSLYLPEPADHIVDDILAENHVEP 373 (380)
T ss_pred --HHHHHHHHHHhCCCchHHHHHHHHHHhhhhhh
Confidence 48999999998888888888888888776543
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-19 Score=212.01 Aligned_cols=299 Identities=15% Similarity=0.142 Sum_probs=214.7
Q ss_pred cCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccc-hh-hhhhH--H----------HHHHHH
Q 001781 282 EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP-VY-VERGF--Q----------NLLSYW 347 (1013)
Q Consensus 282 ~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~-~y-~~~~l--~----------klLs~~ 347 (1013)
..|||||+|.++..++..+.+... +....+|.|+|+|+-.+..... .+ ....+ . ..++..
T Consensus 129 ~~pDIvH~hDWqt~L~~~~lk~~~------~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~l 202 (487)
T COG0297 129 WLPDIVHAHDWQTGLLPAYLKQRY------RSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFL 202 (487)
T ss_pred CCCCEEEeecHHHHHHHHHHhhcc------cccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhh
Confidence 369999999999998887776431 0124689999999944322211 00 00000 0 112333
Q ss_pred HHHhccccEEEEcCCCchhhhc------------cCCCCCEEEeCCCCCCcccccccCcc------------------hh
Q 001781 348 KSVFSRVNVIVFPDYTLPMLYS------------VLDAGNFFVIPGSPADVWAVEAYSKS------------------HE 397 (1013)
Q Consensus 348 ~~~l~~AD~VI~~S~~~~~ly~------------~l~~~ki~VIPnggVDl~~~~~F~p~------------------~~ 397 (1013)
+..+..||.|.+.|........ .....++..|-|+ +|. +.+.|. ..
T Consensus 203 K~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~Ng-iD~---~~wnp~~d~~~~~~y~~~~~~~k~~n 278 (487)
T COG0297 203 KGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNG-IDY---DLWNPETDPYIAANYSAEVLPAKAEN 278 (487)
T ss_pred hhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEee-EEe---cccCcccccchhccCCccchhhhHHH
Confidence 4467789999887766544311 1112567777776 554 444331 23
Q ss_pred HHHHHHHcCCCC--CcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHH
Q 001781 398 KYQLRKENGFLK--DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 475 (1013)
Q Consensus 398 ~~~~R~~lgi~~--d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela 475 (1013)
+..+.+++|++. +.+++.++||+.. +||.+++++++..++++ .++ +++.|.|+..+.+.+..++
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~----QKG~dl~~~~i~~~l~~---------~~~-~vilG~gd~~le~~~~~la 344 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTA----QKGLDLLLEAIDELLEQ---------GWQ-LVLLGTGDPELEEALRALA 344 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeecccc----ccchhHHHHHHHHHHHh---------Cce-EEEEecCcHHHHHHHHHHH
Confidence 456678888883 5689999999966 89999999999999875 467 5789999777888889999
Q ss_pred HHcCCCCCcEEEcCCcccH-HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--------CCe
Q 001781 476 SRLGLLEHSVRHYGFNGDV-NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--------GAQ 546 (1013)
Q Consensus 476 ~eLgL~dg~V~FlG~~eDl-~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d--------G~~ 546 (1013)
+++... .....|+.+.+ ..+|+.||++++||++| +||++-++||.+|+++|+..+||.++.|.+ ..+
T Consensus 345 ~~~~~~--~~~~i~~~~~la~~i~agaD~~lmPSrfE--PcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gt 420 (487)
T COG0297 345 SRHPGR--VLVVIGYDEPLAHLIYAGADVILMPSRFE--PCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGT 420 (487)
T ss_pred HhcCce--EEEEeeecHHHHHHHHhcCCEEEeCCcCc--CCcHHHHHHHHcCCcceEcccCCccceecCccchhccCcee
Confidence 876542 34455565554 57899999999999999 999999999999999999999999999886 479
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCcccHHH-HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhcCCC
Q 001781 547 VIFFQKDNPEGLSRAFSLFISNGKLSKF-ARTVASAGRLHAKNMLALDCVTRYARILENVLNFPS 610 (1013)
Q Consensus 547 G~Lv~p~D~eeLAeAI~~LL~d~elR~~-~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~~ps 610 (1013)
|+++.+.|+++++.+|...+.-....+. .+.+..++-. .+|+|+..+.+|.++|+.+++.+-
T Consensus 421 Gf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~~ 483 (487)
T COG0297 421 GFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKPF 483 (487)
T ss_pred EEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhcccc
Confidence 9999999999999999988763332111 2333333322 699999999999999999987653
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-19 Score=203.62 Aligned_cols=278 Identities=15% Similarity=0.152 Sum_probs=188.8
Q ss_pred HHHHHHhhcCccEEEEcCcch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhc
Q 001781 274 GQISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFS 352 (1013)
Q Consensus 274 ~Li~lLk~~kpDIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~ 352 (1013)
.+.+++++++||+|+++++.. .....++.+... ....++|++.++.+...... .| ..+
T Consensus 91 ~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~-----~~~~~~p~~~~~tD~~~~~~--------------~w--~~~ 149 (382)
T PLN02605 91 EVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGK-----ELGKKIPFTTVVTDLGTCHP--------------TW--FHK 149 (382)
T ss_pred HHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhh-----ccCCCCCEEEEECCCCCcCc--------------cc--ccC
Confidence 466888899999998854221 111112221110 00145888877655310100 01 245
Q ss_pred cccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCH
Q 001781 353 RVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDY 430 (1013)
Q Consensus 353 ~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~ 430 (1013)
.+|.+++++...... ..+++.+++.+++++ ++. +.+.+...+..+++++|++++.++|+++|+... .|++
T Consensus 150 ~~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~-v~~---~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g----~~~~ 221 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALKRGLEPSQIRVYGLP-IRP---SFARAVRPKDELRRELGMDEDLPAVLLMGGGEG----MGPL 221 (382)
T ss_pred CCCEEEECCHHHHHHHHHcCCCHHHEEEECcc-cCH---hhccCCCCHHHHHHHcCCCCCCcEEEEECCCcc----cccH
Confidence 789999988766543 346777889998764 764 333333346678999999999999999998644 6889
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCC
Q 001781 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 510 (1013)
Q Consensus 431 dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~ 510 (1013)
..+++++..+.... ....++.++++++|++.. +.+.|++. .... +|+|+|+.+++..+|++||++|.++
T Consensus 222 ~~li~~l~~~~~~~---~~~~~~~~~~vi~G~~~~-~~~~L~~~----~~~~-~v~~~G~~~~~~~l~~aaDv~V~~~-- 290 (382)
T PLN02605 222 EETARALGDSLYDK---NLGKPIGQVVVICGRNKK-LQSKLESR----DWKI-PVKVRGFVTNMEEWMGACDCIITKA-- 290 (382)
T ss_pred HHHHHHHHHhhccc---cccCCCceEEEEECCCHH-HHHHHHhh----cccC-CeEEEeccccHHHHHHhCCEEEECC--
Confidence 99998887643110 000145665778887642 12444433 3344 7999999999999999999999853
Q ss_pred CCCCccHHHHHHHHhCCCEEEcCC------CCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhC-cccHHHHHHHHHHHH
Q 001781 511 VEQGFPSLIVRAMTFGIPVITPDF------PIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN-GKLSKFARTVASAGR 583 (1013)
Q Consensus 511 EEEGFGivVLEAMA~G~PVIASdv------gGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d-~elR~~~~~Mg~aAR 583 (1013)
.|++++|||+||+|||+++. ++.. .+.++..|+++ .|+++++++|.+++++ ++. +++|+++++
T Consensus 291 ----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~-~i~~~g~g~~~--~~~~~la~~i~~ll~~~~~~---~~~m~~~~~ 360 (382)
T PLN02605 291 ----GPGTIAEALIRGLPIILNGYIPGQEEGNVP-YVVDNGFGAFS--ESPKEIARIVAEWFGDKSDE---LEAMSENAL 360 (382)
T ss_pred ----CcchHHHHHHcCCCEEEecCCCccchhhHH-HHHhCCceeec--CCHHHHHHHHHHHHcCCHHH---HHHHHHHHH
Confidence 37899999999999999983 4443 34445567654 7999999999999998 654 589999999
Q ss_pred HHHHhhcHHHHHHHHHHH
Q 001781 584 LHAKNMLALDCVTRYARI 601 (1013)
Q Consensus 584 e~ae~fs~e~~~~~y~~L 601 (1013)
+.+.....++.++.+.++
T Consensus 361 ~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 361 KLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HhcCCchHHHHHHHHHHH
Confidence 998888888887766544
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=202.11 Aligned_cols=357 Identities=15% Similarity=0.091 Sum_probs=227.3
Q ss_pred CCCCCEEEEEecccCCCCceehHHHHHHHHHH---------CCCEEEEEEcCCCCch----HHH----------------
Q 001781 219 GVRPPRIGLILGNMAKDSRSLLLITVVKNLQK---------LGYVFKIYAVRSGNSH----SLW---------------- 269 (1013)
Q Consensus 219 g~r~~RIalI~g~l~~gg~~l~vl~Lak~L~e---------~GyeV~Vlt~~~g~~~----~~~---------------- 269 (1013)
..-..+++++.+++..+|.+...++.+-.+.. .|++|.+++....... ..+
T Consensus 31 ~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~ 110 (495)
T KOG0853|consen 31 EKPFEHVTFIHPDLGIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGD 110 (495)
T ss_pred cccchhheeeccccccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEe
Confidence 34456689999999999999999998888888 9999999976432221 000
Q ss_pred ---HHHH-H-------------------HHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCC
Q 001781 270 ---EQIA-G-------------------QISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQED 326 (1013)
Q Consensus 270 ---r~i~-~-------------------Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~ 326 (1013)
+.++ . +.++. .+.|.|..-.. -. .... .-++.+|...+++.|++|..
T Consensus 111 ~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~---~~----~~~l-~~~~~~p~~~~~i~~~~h~~ 180 (495)
T KOG0853|consen 111 WLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFV---SA----CVPL-LKQLSGPDVIIKIYFYCHFP 180 (495)
T ss_pred ecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhceeecchH---HH----HHHH-HHHhcCCcccceeEEeccch
Confidence 0000 0 00010 11121111100 00 0000 11122244467899999984
Q ss_pred cc--ccccchhhhhhH-HHHHHHH-HHHhccccEEEEcCCCchhh----hccCCCCCEEEeCCCCCCcccccccCc----
Q 001781 327 SL--ANRLPVYVERGF-QNLLSYW-KSVFSRVNVIVFPDYTLPML----YSVLDAGNFFVIPGSPADVWAVEAYSK---- 394 (1013)
Q Consensus 327 ~l--~~~l~~y~~~~l-~klLs~~-~~~l~~AD~VI~~S~~~~~l----y~~l~~~ki~VIPnggVDl~~~~~F~p---- 394 (1013)
.. ..+... ...+ ...+.+. ......++.+++.++..... ...+....+.+++.. +|. ..+.+
T Consensus 181 ~~lla~r~g~--~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~e-i~~---s~~~~~~~~ 254 (495)
T KOG0853|consen 181 DSLLAKRLGV--LKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPE-IDG---SWFTYGQYE 254 (495)
T ss_pred HHHhccccCc--cceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeecc-ccc---hhccccccc
Confidence 31 122100 0000 0111111 12345577888877665443 223444445555543 554 33221
Q ss_pred -c-hhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCC--------C
Q 001781 395 -S-HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS--------T 464 (1013)
Q Consensus 395 -~-~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G--------~ 464 (1013)
. ..+...|...+....+.++..+.|+.+ .||++++++++..+....++ ..-++.+ ++++|+. .
T Consensus 255 ~~~~~~~~~r~~~~v~~~d~~~~siN~~~p----gkd~~l~l~a~~~~~~~i~~--~~~~~~h-l~~~g~~G~d~~~sen 327 (495)
T KOG0853|consen 255 SHLELRLPVRLYRGVSGIDRFFPSINRFEP----GKDQDLALPAFTLLHDSIPE--PSISSEH-LVVAGSRGYDERDSEN 327 (495)
T ss_pred cchhcccccceeeeecccceEeeeeeecCC----CCCceeehhhHHhhhcccCC--CCCCceE-EEEecCCCccccchhh
Confidence 1 112233344566666778888888766 69999999999988766543 1224677 5677732 2
Q ss_pred cccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccE--EE-EccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhh
Q 001781 465 DGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI--VL-YGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYV 541 (1013)
Q Consensus 465 e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADI--fV-lPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI 541 (1013)
..|.++|+++++++++....|.|+....+...+...||. ++ .|.. | +||++++|||+||+||||++.||+.|+|
T Consensus 328 ~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~-E--~FGiv~IEAMa~glPvvAt~~GGP~EiV 404 (495)
T KOG0853|consen 328 VEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPAN-E--HFGIVPIEAMACGLPVVATNNGGPAEIV 404 (495)
T ss_pred HHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCC-C--CccceeHHHHhcCCCEEEecCCCceEEE
Confidence 337788999999999843278887877666666666554 33 3544 6 9999999999999999999999999999
Q ss_pred ccCCeEEEEcCCCHH---HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHh-hcHHHHHHHHHHHHHHH
Q 001781 542 AEGAQVIFFQKDNPE---GLSRAFSLFISNGKLSKFARTVASAGRLHAKN-MLALDCVTRYARILENV 605 (1013)
Q Consensus 542 ~dG~~G~Lv~p~D~e---eLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~-fs~e~~~~~y~~Lye~l 605 (1013)
.++.+|++++| +.+ .++++|.++..|+++| .+|+++|++.+++ |+|....+++.++....
T Consensus 405 ~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~---~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~ 468 (495)
T KOG0853|consen 405 VHGVTGLLIDP-GQEAVAELADALLKLRRDPELW---ARMGKNGLKRVKEMFSWQHYSERIASVLGKY 468 (495)
T ss_pred EcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHHhHHHHHHHHHHHhHhc
Confidence 99999999999 555 6999999999999985 9999999998888 77766666777766644
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-18 Score=195.72 Aligned_cols=323 Identities=14% Similarity=0.177 Sum_probs=211.6
Q ss_pred CCEEEEEecccCCCCceehHHHHHHHHHHCC---CEEEEEEc-C-CCC-chH---------------HHH----------
Q 001781 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLG---YVFKIYAV-R-SGN-SHS---------------LWE---------- 270 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl~Lak~L~e~G---yeV~Vlt~-~-~g~-~~~---------------~~r---------- 270 (1013)
.+||++++.+++.|- ....-.+.++|++.| ++|.++.. . .++ ... .|.
T Consensus 5 ~~~vlil~~~~G~GH-~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~~~ 83 (391)
T PRK13608 5 NKKILIITGSFGNGH-MQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDKL 83 (391)
T ss_pred CceEEEEECCCCchH-HHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCchhh
Confidence 467888887774432 334445777777665 45665532 1 111 111 111
Q ss_pred --------HHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHH
Q 001781 271 --------QIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQN 342 (1013)
Q Consensus 271 --------~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~k 342 (1013)
.+..+.+++++.+||+|++..... .+..+..... .++|++....+.....
T Consensus 84 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~-~~~~l~~~~~---------~~iP~~~v~td~~~~~------------ 141 (391)
T PRK13608 84 DKCFYKYYGLNKLINLLIKEKPDLILLTFPTP-VMSVLTEQFN---------INIPVATVMTDYRLHK------------ 141 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCEEEECCcHH-HHHHHHHhcC---------CCCCEEEEeCCCCccc------------
Confidence 112366788889999999864433 2222222111 4688865544321110
Q ss_pred HHHHHHHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcE-EEEEEcc
Q 001781 343 LLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEI-VVVVVGS 419 (1013)
Q Consensus 343 lLs~~~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~-vIL~VGR 419 (1013)
.| ..+.+|.+++.+......+ .+++.+++.++++ |++. .|.........+.+++++++++ ++++.|+
T Consensus 142 ---~w--~~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~Gi-Pv~~----~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~ 211 (391)
T PRK13608 142 ---NW--ITPYSTRYYVATKETKQDFIDVGIDPSTVKVTGI-PIDN----KFETPIDQKQWLIDNNLDPDKQTILMSAGA 211 (391)
T ss_pred ---cc--ccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECe-ecCh----HhcccccHHHHHHHcCCCCCCCEEEEECCC
Confidence 01 1356889888887665442 4567778888755 3553 3433223456677899987655 4556788
Q ss_pred CCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHH
Q 001781 420 SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL 499 (1013)
Q Consensus 420 l~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLa 499 (1013)
+.. .|+++.+++++.. . .++++|++++|.+.. ..+++.+.++..+ +|++.|+.+++..+|+
T Consensus 212 lg~----~k~~~~li~~~~~---~-------~~~~~~vvv~G~~~~----l~~~l~~~~~~~~-~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 212 FGV----SKGFDTMITDILA---K-------SANAQVVMICGKSKE----LKRSLTAKFKSNE-NVLILGYTKHMNEWMA 272 (391)
T ss_pred ccc----chhHHHHHHHHHh---c-------CCCceEEEEcCCCHH----HHHHHHHHhccCC-CeEEEeccchHHHHHH
Confidence 743 5889998887521 1 146786666675532 2233334444555 8999999999999999
Q ss_pred HccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC-CCC----chhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHH
Q 001781 500 MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPI----IKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKF 574 (1013)
Q Consensus 500 aADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd-vgG----i~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~ 574 (1013)
.||++|.. +.|+++.|||++|+|+|+++ .+| ...++.+...|+.+ .|+++++++|.++++|++.
T Consensus 273 ~aDl~I~k------~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~~l~~~i~~ll~~~~~--- 341 (391)
T PRK13608 273 SSQLMITK------PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPEEAIKIVASLTNGNEQ--- 341 (391)
T ss_pred hhhEEEeC------CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHHHHHHHHHHHhcCHHH---
Confidence 99999862 55899999999999999986 444 22344555566554 5999999999999998875
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 575 ARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 575 ~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
+++|++++++.++.+.+++.++.+.+++..+.+
T Consensus 342 ~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 342 LTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 489999999999999999999999988876544
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-18 Score=212.28 Aligned_cols=295 Identities=12% Similarity=0.081 Sum_probs=201.7
Q ss_pred HhhcCc-cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEE
Q 001781 279 LGQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 279 Lk~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~V 357 (1013)
....++ |+|-.|.|+-.++..+..+.. ...++.+..|-.- +..-.+.-+..-..++ ..+-.||.|
T Consensus 142 ~~~~~~~d~vWvhDYhL~llp~~lR~~~---------~~~~igfFlHiPF-Ps~e~fr~lp~r~~il----~gll~aDli 207 (797)
T PLN03063 142 KENYEEGDVVWCHDYHLMFLPQYLKEYN---------NKMKVGWFLHTPF-PSSEIYKTLPSRSELL----RAVLTADLI 207 (797)
T ss_pred HHhcCCCCEEEEecchhhhHHHHHHHhC---------CCCcEEEEecCCC-CCHHHHhhCCCHHHHH----HHHhcCCEE
Confidence 333455 588889999999998887665 4578888877742 2111111111111222 223346666
Q ss_pred EEcCCCchhhh------------------ccCCCCCEEEeCCCCCCcccccccCcchh----H---HHHHHHcCCCCCcE
Q 001781 358 VFPDYTLPMLY------------------SVLDAGNFFVIPGSPADVWAVEAYSKSHE----K---YQLRKENGFLKDEI 412 (1013)
Q Consensus 358 I~~S~~~~~ly------------------~~l~~~ki~VIPnggVDl~~~~~F~p~~~----~---~~~R~~lgi~~d~~ 412 (1013)
-|.++.....+ ..-...++.++|++ ||. +.|.+... . ..+++.++ +++
T Consensus 208 gF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~G-ID~---~~f~~~~~~~~~~~~~~~lr~~~~---~~~ 280 (797)
T PLN03063 208 GFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIG-IDP---ERFINTCELPEVKQHMKELKRFFA---GRK 280 (797)
T ss_pred EeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecc-cCH---HHHHHHhcChhHHHHHHHHHHhcC---CCe
Confidence 66444332220 01112457889996 887 66643211 1 13334433 567
Q ss_pred EEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCC--CcccHHHHHHHHHHcC--CCC--Cc--
Q 001781 413 VVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS--TDGYNDALQEVASRLG--LLE--HS-- 484 (1013)
Q Consensus 413 vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G--~e~Y~e~Lkela~eLg--L~d--g~-- 484 (1013)
+|++|||+.+ .||+..+|+|+..+++.+++... ++.++.++|.. .....+.+++.++++. ++. +.
T Consensus 281 lIl~VgRLd~----~KGi~~lL~Afe~lL~~~P~~~~---kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~ 353 (797)
T PLN03063 281 VILGVDRLDM----IKGIPQKYLAFEKFLEENPEWRD---KVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVS 353 (797)
T ss_pred EEEEeccccc----ccCHHHHHHHHHHHHHhCccccC---cEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCC
Confidence 9999999966 89999999999999877643211 34444344432 1112366777777664 322 01
Q ss_pred ---EEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCC----EEEcCCCCchhhhccCCeEEEEcCCC
Q 001781 485 ---VRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQKDN 554 (1013)
Q Consensus 485 ---V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~P----VIASdvgGi~EiI~dG~~G~Lv~p~D 554 (1013)
|++++ ..+++..+|+.||+||+||..| |||++++||||||+| +|+|+.+|..+.+ +.+|++++|.|
T Consensus 354 ~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrE--GmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D 429 (797)
T PLN03063 354 SVPIHHLDCSVDFNYLCALYAITDVMLVTSLRD--GMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWN 429 (797)
T ss_pred CceeEEecCCCCHHHHHHHHHhCCEEEeCcccc--ccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCC
Confidence 33333 3478999999999999999998 999999999999999 9999999998876 35699999999
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 555 PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 555 ~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
++++|++|.++++++. ++++++.+++++++.++.+...++.+.+.|+.+..
T Consensus 430 ~~~lA~AI~~aL~m~~--~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 430 ITEVSSAIKEALNMSD--EERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred HHHHHHHHHHHHhCCH--HHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999665 34577888899999999999999998888877654
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.6e-18 Score=173.66 Aligned_cols=223 Identities=21% Similarity=0.193 Sum_probs=160.3
Q ss_pred EEEecccC--CCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHH
Q 001781 226 GLILGNMA--KDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAK 303 (1013)
Q Consensus 226 alI~g~l~--~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak 303 (1013)
+++..... .+|.......+++.|.+.||+|.++. .....+...+++.+||+||++.............
T Consensus 2 ~~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~v~~----------~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~ 71 (229)
T cd01635 2 LLVSTPLLPGGGGVELVLLDLAKALARRGHEVEVVA----------LLLLLLLRILRGFKPDVVHAHGYYPAPLALLLAA 71 (229)
T ss_pred eeeccccCCCCCCchhHHHHHHHHHHHcCCeEEEEE----------echHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHH
Confidence 34444444 47889999999999999999999998 1122244555678999999987766554432221
Q ss_pred HhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCC
Q 001781 304 EAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSP 383 (1013)
Q Consensus 304 ~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPngg 383 (1013)
.. .++|+++++|+.......... . .. ....+..++
T Consensus 72 ~~---------~~~~~i~~~h~~~~~~~~~~~-~----~~---~~~~~~~~~---------------------------- 106 (229)
T cd01635 72 RL---------LGIPLVLTVHGVNRSLLEGVP-L----SL---LALSIGLAD---------------------------- 106 (229)
T ss_pred hh---------CCCCEEEEEcCccHhhcccCc-H----HH---HHHHHhhcc----------------------------
Confidence 22 468999999996432221000 0 00 000000000
Q ss_pred CCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCC
Q 001781 384 ADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS 463 (1013)
Q Consensus 384 VDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G 463 (1013)
..++|++.+ .||++.+++++..+.++. ++++ ++++|.+
T Consensus 107 ------------------------------~~~~g~~~~----~k~~~~~~~a~~~l~~~~-------~~~~-~~i~G~~ 144 (229)
T cd01635 107 ------------------------------KVFVGRLAP----EKGLDDLIEAFALLKERG-------PDLK-LVIAGDG 144 (229)
T ss_pred ------------------------------eEEEEeecc----cCCHHHHHHHHHHHHHhC-------CCeE-EEEEeCC
Confidence 118888755 699999999999986553 5889 4688887
Q ss_pred CcccHHHHHHHHHHcCCCCCcEEEcCC---cccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhh
Q 001781 464 TDGYNDALQEVASRLGLLEHSVRHYGF---NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEY 540 (1013)
Q Consensus 464 ~e~Y~e~Lkela~eLgL~dg~V~FlG~---~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~Ei 540 (1013)
... ...++.+.+++..+ +|.++|. .+++..+++.||++++||..| ++|.+++|||+||+|||+|+.++..|+
T Consensus 145 ~~~--~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e--~~~~~~~Eam~~g~pvi~s~~~~~~e~ 219 (229)
T cd01635 145 PER--EYLEELLAALLLLD-RVIFLGGLDPEELLALLLAAADVFVLPSLRE--GFGLVVLEAMACGLPVIATDVGGPPEI 219 (229)
T ss_pred CCh--HHHHHHHHhcCCcc-cEEEeCCCCcHHHHHHHhhcCCEEEeccccc--CcChHHHHHHhCCCCEEEcCCCCcceE
Confidence 765 55555577778887 9999996 345566677799999999998 999999999999999999999999999
Q ss_pred hccCCeEEEE
Q 001781 541 VAEGAQVIFF 550 (1013)
Q Consensus 541 I~dG~~G~Lv 550 (1013)
+.++.+|+++
T Consensus 220 i~~~~~g~~~ 229 (229)
T cd01635 220 VEDGLTGLLV 229 (229)
T ss_pred EECCCceEEC
Confidence 9999999874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-17 Score=187.37 Aligned_cols=245 Identities=14% Similarity=0.088 Sum_probs=160.5
Q ss_pred CCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCc
Q 001781 315 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSK 394 (1013)
Q Consensus 315 ~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p 394 (1013)
...++||.+++.-..... .+. .........++.||.|++.+........... .++.+|||+ +|. +.|.+
T Consensus 121 ~~~~~Vyd~~D~~~~~~~--~~~----~~~~~e~~~~~~ad~vi~~S~~l~~~~~~~~-~~i~~i~ng-vd~---~~f~~ 189 (373)
T cd04950 121 QASLVVYDCVDDLSAFPG--GPP----ELLEAERRLLKRADLVFTTSPSLYEAKRRLN-PNVVLVPNG-VDY---EHFAA 189 (373)
T ss_pred CCCeEEEEcccchhccCC--CCH----HHHHHHHHHHHhCCEEEECCHHHHHHHhhCC-CCEEEcccc-cCH---HHhhc
Confidence 457899998874211111 111 1113344567889999999988776654444 689999997 887 66754
Q ss_pred chhHH-HHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHH
Q 001781 395 SHEKY-QLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 473 (1013)
Q Consensus 395 ~~~~~-~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lke 473 (1013)
..... ..+. ....++++|+|+|++.. +++.+++.++.. .. |+++ ++|+|.++.. ....
T Consensus 190 ~~~~~~~~~~--~~~~~~~~i~y~G~l~~----~~d~~ll~~la~----~~-------p~~~-~vliG~~~~~--~~~~- 248 (373)
T cd04950 190 ARDPPPPPAD--LAALPRPVIGYYGAIAE----WLDLELLEALAK----AR-------PDWS-FVLIGPVDVS--IDPS- 248 (373)
T ss_pred ccccCCChhH--HhcCCCCEEEEEecccc----ccCHHHHHHHHH----HC-------CCCE-EEEECCCcCc--cChh-
Confidence 32111 0111 12245679999999865 466665443322 21 6889 4688987322 1121
Q ss_pred HHHHcCCCCCcEEEcCCc--ccHHHHHHHccEEEEccCCC---CCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEE
Q 001781 474 VASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLYGSSQV---EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI 548 (1013)
Q Consensus 474 la~eLgL~dg~V~FlG~~--eDl~~lLaaADIfVlPS~~E---EEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~ 548 (1013)
..... + +|+|+|.. +++..+|+.+|++++|+..+ ..++|++++||||||+|||+++.+.+ +..+..++
T Consensus 249 --~~~~~-~-nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~ 321 (373)
T cd04950 249 --ALLRL-P-NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVV 321 (373)
T ss_pred --HhccC-C-CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEE
Confidence 11223 3 89999954 78999999999999998642 12689999999999999999986654 44433344
Q ss_pred EEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 001781 549 FFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1013)
Q Consensus 549 Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~ 604 (1013)
+ .++|+++++++|.+++.++... ..+ ++++.+++++|+..++++.+.+++
T Consensus 322 ~-~~~d~~~~~~ai~~~l~~~~~~--~~~---~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 322 L-IADDPEEFVAAIEKALLEDGPA--RER---RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred E-eCCCHHHHHHHHHHHHhcCCch--HHH---HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 4 4579999999999987665431 111 222378999999999988865543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-16 Score=181.52 Aligned_cols=324 Identities=15% Similarity=0.136 Sum_probs=201.2
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch----------------HH----------HHHHHHHH
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------SL----------WEQIAGQI 276 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~----------------~~----------~r~i~~Li 276 (1013)
++|+++.|.- |.-++.-.+++.|++.++++.+++....... .+ ...+..+.
T Consensus 2 ~ki~i~~Ggt---~G~i~~a~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 78 (380)
T PRK00025 2 LRIAIVAGEV---SGDLLGAGLIRALKARAPNLEFVGVGGPRMQAAGCESLFDMEELAVMGLVEVLPRLPRLLKIRRRLK 78 (380)
T ss_pred ceEEEEecCc---CHHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCCCccccCHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 4677776654 3334444589999998888888865431100 11 13334477
Q ss_pred HHHhhcCccEEEEcCcchHHHHH-HHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhcccc
Q 001781 277 SILGQEQYSLIDWSIFDGIIADS-LEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN 355 (1013)
Q Consensus 277 ~lLk~~kpDIIh~~~~~~~lv~~-Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD 355 (1013)
+++++.+||+|+++.+....... ...+. .++|+++..+...+. +. .... ....+.+|
T Consensus 79 ~~l~~~kPdivi~~~~~~~~~~~a~~a~~----------~~ip~i~~~~~~~~~-~~--------~~~~---~~~~~~~d 136 (380)
T PRK00025 79 RRLLAEPPDVFIGIDAPDFNLRLEKKLRK----------AGIPTIHYVSPSVWA-WR--------QGRA---FKIAKATD 136 (380)
T ss_pred HHHHHcCCCEEEEeCCCCCCHHHHHHHHH----------CCCCEEEEeCCchhh-cC--------chHH---HHHHHHHh
Confidence 88889999999997764322211 11211 458998875543221 11 0111 11244578
Q ss_pred EEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEE-ccCCCcCccccCHHHHH
Q 001781 356 VIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVV-GSSFFYNELSWDYAVAM 434 (1013)
Q Consensus 356 ~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~V-GRl~~yk~~~Kg~dlLL 434 (1013)
.+++.+......+.... .++.++.|. +.. . ..+...+...+.+++++++.++|+.+ |+... +..+....++
T Consensus 137 ~i~~~~~~~~~~~~~~g-~~~~~~G~p-~~~---~-~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~--~~~~~~~~l~ 208 (380)
T PRK00025 137 HVLALFPFEAAFYDKLG-VPVTFVGHP-LAD---A-IPLLPDRAAARARLGLDPDARVLALLPGSRGQ--EIKRLLPPFL 208 (380)
T ss_pred hheeCCccCHHHHHhcC-CCeEEECcC-HHH---h-cccccChHHHHHHcCCCCCCCEEEEECCCCHH--HHHHHHHHHH
Confidence 88888776665543332 236666554 221 1 11112345677889998777665544 42111 1113467778
Q ss_pred HHHHHHHHHHhhcccCCCCeEEEEEEcC-CCcccHHHHHHHHHHc-CCCCCcEEEcCCcccHHHHHHHccEEEEccCCCC
Q 001781 435 HDVGPLLIKYARRNSVEGSFKFVFLCGN-STDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 435 eAfa~Ll~~~~~lk~~gpdikFLVIvG~-G~e~Y~e~Lkela~eL-gL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EE 512 (1013)
+++..+.++. ++++| +++|. +.. .+.++++++++ ++. |.+.. +++..+|+.||++|++|
T Consensus 209 ~a~~~l~~~~-------~~~~~-ii~~~~~~~--~~~~~~~~~~~~~~~---v~~~~--~~~~~~~~~aDl~v~~s---- 269 (380)
T PRK00025 209 KAAQLLQQRY-------PDLRF-VLPLVNPKR--REQIEEALAEYAGLE---VTLLD--GQKREAMAAADAALAAS---- 269 (380)
T ss_pred HHHHHHHHhC-------CCeEE-EEecCChhh--HHHHHHHHhhcCCCC---eEEEc--ccHHHHHHhCCEEEECc----
Confidence 8887775443 57885 46654 432 47788888776 553 55543 48999999999999987
Q ss_pred CCccHHHHHHHHhCCCEEEc-----------------CCCCchhhhccCC--eEEEEcCCCHHHHHHHHHHHHhCcccHH
Q 001781 513 QGFPSLIVRAMTFGIPVITP-----------------DFPIIKEYVAEGA--QVIFFQKDNPEGLSRAFSLFISNGKLSK 573 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIAS-----------------dvgGi~EiI~dG~--~G~Lv~p~D~eeLAeAI~~LL~d~elR~ 573 (1013)
|.+.+|||++|+|||+. +.+++++++.++. .+++.+..|++++++++.++++|++.+
T Consensus 270 ---G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~- 345 (380)
T PRK00025 270 ---GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARR- 345 (380)
T ss_pred ---cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHH-
Confidence 56778999999999986 4566678777653 557777789999999999999999874
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHH
Q 001781 574 FARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 574 ~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~l 605 (1013)
++|++++.+..+.. ....+++..+++.++
T Consensus 346 --~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 346 --QALLEGFTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred --HHHHHHHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 88888876655543 223344444444443
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-17 Score=201.97 Aligned_cols=288 Identities=9% Similarity=0.064 Sum_probs=190.7
Q ss_pred hhcCc-cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 280 GQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 280 k~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
...++ |+|..|.|+..++.....+.. ...++-+..|-. ++......-+.....+ ...+-.+|.|-
T Consensus 129 ~~~~~~d~vwvhDYhl~l~p~~lr~~~---------~~~~igfFlH~p-fP~~~~f~~lp~~~~l----l~~ll~~Dlig 194 (726)
T PRK14501 129 AIARPGDVVWVHDYQLMLLPAMLRERL---------PDARIGFFLHIP-FPSFEVFRLLPWREEI----LEGLLGADLIG 194 (726)
T ss_pred HhcCCCCEEEEeCchhhhHHHHHHhhC---------CCCcEEEEeeCC-CCChHHHhhCCChHHH----HHHHhcCCeEE
Confidence 33444 588889999999888887654 356777777764 2211100001111111 12233456665
Q ss_pred EcCCCchhh-------------------hccCCCCCEEEeCCCCCCcccccccCcchh-------HHHHHHHcCCCCCcE
Q 001781 359 FPDYTLPML-------------------YSVLDAGNFFVIPGSPADVWAVEAYSKSHE-------KYQLRKENGFLKDEI 412 (1013)
Q Consensus 359 ~~S~~~~~l-------------------y~~l~~~ki~VIPnggVDl~~~~~F~p~~~-------~~~~R~~lgi~~d~~ 412 (1013)
|........ +.+. ..++.++|+| ||+ +.|.+... ...++..+ ++++
T Consensus 195 f~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr-~~~v~v~p~G-ID~---~~f~~~~~~~~~~~~~~~lr~~~---~~~~ 266 (726)
T PRK14501 195 FHTYDYVRHFLSSVLRVLGYETELGEIRLGGR-IVRVDAFPMG-IDY---DKFHNSAQDPEVQEEIRRLRQDL---RGRK 266 (726)
T ss_pred eCCHHHHHHHHHHHHHHcCCccCCCeEEECCE-EEEEEEEECe-EcH---HHHHHHhcCchHHHHHHHHHHHc---CCCE
Confidence 544332111 1111 1247888997 887 77744221 11233432 4677
Q ss_pred EEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcC----CCcccHHHHHHHHHHc----C-----
Q 001781 413 VVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN----STDGYNDALQEVASRL----G----- 479 (1013)
Q Consensus 413 vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~----G~e~Y~e~Lkela~eL----g----- 479 (1013)
+|++|||+.. .||+..+++|+..+++.+++.. .+++|+ ++|. +... .+.+++.++++ +
T Consensus 267 ~il~VgRl~~----~Kgi~~~l~A~~~ll~~~p~~~---~~v~lv-~v~~~sr~~~~~-~~~l~~~~~~~v~~in~~~~~ 337 (726)
T PRK14501 267 IILSIDRLDY----TKGIPRRLLAFERFLEKNPEWR---GKVRLV-QVAVPSRTGVPQ-YQEMKREIDELVGRINGEFGT 337 (726)
T ss_pred EEEEecCccc----ccCHHHHHHHHHHHHHhCcccc---CCEEEE-EEecCCCcchHH-HHHHHHHHHHHHHHHHhhcCC
Confidence 9999999976 8999999999999987753221 146754 5552 2111 23444444332 2
Q ss_pred --CCCCcEEEcC--CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC-----CEEEcCCCCchhhhccCCeEEEE
Q 001781 480 --LLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-----PVITPDFPIIKEYVAEGAQVIFF 550 (1013)
Q Consensus 480 --L~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~-----PVIASdvgGi~EiI~dG~~G~Lv 550 (1013)
... .+.+.| ..+++..+|+.||++++||..| |||++++||||||+ ||++...|+..+++ .|+++
T Consensus 338 ~~~~p-v~~~~~~~~~~~l~~ly~~aDv~v~~S~~E--G~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv 410 (726)
T PRK14501 338 VDWTP-IHYFYRSLPFEELVALYRAADVALVTPLRD--GMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLV 410 (726)
T ss_pred CCcce-EEEEeCCCCHHHHHHHHHhccEEEeccccc--ccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEE
Confidence 111 345656 5588999999999999999998 99999999999954 66666678888775 38999
Q ss_pred cCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 551 QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 551 ~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
+|.|+++++++|.++++++.. ++.+..+++++.+.++++...++.|.+.|+++..
T Consensus 411 ~P~d~~~la~ai~~~l~~~~~--e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 411 NPNDIEGIAAAIKRALEMPEE--EQRERMQAMQERLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred CCCCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998752 2355556789999999999999999999988754
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.6e-16 Score=175.55 Aligned_cols=265 Identities=12% Similarity=0.064 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhhcCccEEEEcCcch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHH
Q 001781 270 EQIAGQISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWK 348 (1013)
Q Consensus 270 r~i~~Li~lLk~~kpDIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~ 348 (1013)
..+..+.+++++.+||+||+|.... .+.+.++++. .++|++..-++. ..... ..+.. ........
T Consensus 73 ~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~----------~~ipv~h~~~g~-~s~~~-~~~~~--~~~~r~~~ 138 (365)
T TIGR00236 73 NMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFY----------LQIPVGHVEAGL-RTGDR-YSPMP--EEINRQLT 138 (365)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHH----------hCCCEEEEeCCC-CcCCC-CCCCc--cHHHHHHH
Confidence 4455688899999999999986433 3445555544 358988653332 11011 00000 01011111
Q ss_pred HHhccccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcc-hhHHHHHHHcCCCCCcEEEEEEc-cCCCcC
Q 001781 349 SVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKS-HEKYQLRKENGFLKDEIVVVVVG-SSFFYN 424 (1013)
Q Consensus 349 ~~l~~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~-~~~~~~R~~lgi~~d~~vIL~VG-Rl~~yk 424 (1013)
.+.+|.+++++...+.. ..+.++.++++++|+.+|. ..+... .....++.+++. ++.++++.+ |. .
T Consensus 139 --~~~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~---~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr~---~ 208 (365)
T TIGR00236 139 --GHIADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDA---LLTNVEIAYSSPVLSEFGE--DKRYILLTLHRR---E 208 (365)
T ss_pred --HHHHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHH---HHHHHhhccchhHHHhcCC--CCCEEEEecCch---h
Confidence 12367888888766544 2367778899999974443 111111 113445666663 233555554 42 1
Q ss_pred ccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc--ccHHHHHHHcc
Q 001781 425 ELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMAD 502 (1013)
Q Consensus 425 ~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~--eDl~~lLaaAD 502 (1013)
...|++..+++|+..+.++. +++++ +++|.+... ..+.+.+.++..+ +|+|+|+. .++..+|+.||
T Consensus 209 ~~~k~~~~ll~a~~~l~~~~-------~~~~~-vi~~~~~~~---~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~ad 276 (365)
T TIGR00236 209 NVGEPLENIFKAIREIVEEF-------EDVQI-VYPVHLNPV---VREPLHKHLGDSK-RVHLIEPLEYLDFLNLAANSH 276 (365)
T ss_pred hhhhHHHHHHHHHHHHHHHC-------CCCEE-EEECCCChH---HHHHHHHHhCCCC-CEEEECCCChHHHHHHHHhCC
Confidence 22488999999998886543 57784 455433221 1223445556665 89999944 46788999999
Q ss_pred EEEEccCCCCCCccHHHHHHHHhCCCEEEc-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001781 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASA 581 (1013)
Q Consensus 503 IfVlPS~~EEEGFGivVLEAMA~G~PVIAS-dvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~a 581 (1013)
+++.+| |..++|||+||+|||++ ++++.+|++.++ .+++++ .|+++++++|.+++++++.+ ++|+++
T Consensus 277 ~vv~~S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d~~~i~~ai~~ll~~~~~~---~~~~~~ 344 (365)
T TIGR00236 277 LILTDS-------GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TDKENITKAAKRLLTDPDEY---KKMSNA 344 (365)
T ss_pred EEEECC-------hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CCHHHHHHHHHHHHhChHHH---HHhhhc
Confidence 998876 34589999999999995 778888988866 556664 79999999999999988763 667665
Q ss_pred H
Q 001781 582 G 582 (1013)
Q Consensus 582 A 582 (1013)
.
T Consensus 345 ~ 345 (365)
T TIGR00236 345 S 345 (365)
T ss_pred C
Confidence 4
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=171.21 Aligned_cols=254 Identities=15% Similarity=0.050 Sum_probs=168.3
Q ss_pred HHHHHHHHhhcCccEEEEcCcchH-HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccc-cccchhhhhhHHHHHHHHHH
Q 001781 272 IAGQISILGQEQYSLIDWSIFDGI-IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLA-NRLPVYVERGFQNLLSYWKS 349 (1013)
Q Consensus 272 i~~Li~lLk~~kpDIIh~~~~~~~-lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~-~~l~~y~~~~l~klLs~~~~ 349 (1013)
...+.+.+++.+||+||++..... +...++++. .++|++...|+.... .... . .....+
T Consensus 77 ~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~----------~~iPvv~~~~g~~s~~~~~~-~------~~~r~~-- 137 (363)
T cd03786 77 LIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFK----------LGIPVAHVEAGLRSFDRGMP-D------EENRHA-- 137 (363)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----------cCCCEEEEecccccCCCCCC-c------hHHHHH--
Confidence 444677888899999999875433 334444433 358998765552110 1110 0 001111
Q ss_pred HhccccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcchh-HHHHHHHcCCCCCcEEEEEEccCCCcCcc
Q 001781 350 VFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHE-KYQLRKENGFLKDEIVVVVVGSSFFYNEL 426 (1013)
Q Consensus 350 ~l~~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~-~~~~R~~lgi~~d~~vIL~VGRl~~yk~~ 426 (1013)
..+.+|.+++++...+.. ..+++.+++++++|+.+|. ..+.+... ....+..++++++.++++++||..... .
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~-~ 213 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDA---LLRLLELAKKELILELLGLLPKKYILVTLHRVENVD-D 213 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHH---HHHHHHhhccchhhhhcccCCCCEEEEEeCCccccC-C
Confidence 234478888887766554 3467788899999864454 22221111 122345678877777888888864311 2
Q ss_pred ccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCC-CCCcEEEcC--CcccHHHHHHHccE
Q 001781 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL-LEHSVRHYG--FNGDVNGVLLMADI 503 (1013)
Q Consensus 427 ~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL-~dg~V~FlG--~~eDl~~lLaaADI 503 (1013)
.|+++.+++|+..+... ++. +++.|.+... +.+++.++++++ .+ +|+|.| +..++..+|+.||+
T Consensus 214 ~k~~~~l~~al~~l~~~---------~~~-vi~~~~~~~~--~~l~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~ad~ 280 (363)
T cd03786 214 GEQLEEILEALAELAEE---------DVP-VVFPNHPRTR--PRIREAGLEFLGHHP-NVLLISPLGYLYFLLLLKNADL 280 (363)
T ss_pred hHHHHHHHHHHHHHHhc---------CCE-EEEECCCChH--HHHHHHHHhhccCCC-CEEEECCcCHHHHHHHHHcCcE
Confidence 58999999999877321 355 3455655543 788888888876 54 899997 45789999999999
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCCEEEcC-CCCchhhhccCCeEEEEcC-CCHHHHHHHHHHHHhCccc
Q 001781 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQK-DNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 504 fVlPS~~EEEGFGivVLEAMA~G~PVIASd-vgGi~EiI~dG~~G~Lv~p-~D~eeLAeAI~~LL~d~el 571 (1013)
+|.+|. | ++.|||++|+|||+++ .+..++.+.+| ..+.. .|+++++++|.++++++..
T Consensus 281 ~v~~Sg------g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g---~~~~~~~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 281 VLTDSG------G-IQEEASFLGVPVLNLRDRTERPETVESG---TNVLVGTDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred EEEcCc------c-HHhhhhhcCCCEEeeCCCCccchhhhee---eEEecCCCHHHHHHHHHHHhcCchh
Confidence 999983 3 4799999999999987 45566777644 33333 3799999999999998875
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-14 Score=154.67 Aligned_cols=223 Identities=22% Similarity=0.338 Sum_probs=169.0
Q ss_pred ccEEEEcCCCchhhhcc-CCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCc--EEEEEEccCCCcCccccCH
Q 001781 354 VNVIVFPDYTLPMLYSV-LDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDE--IVVVVVGSSFFYNELSWDY 430 (1013)
Q Consensus 354 AD~VI~~S~~~~~ly~~-l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~--~vIL~VGRl~~yk~~~Kg~ 430 (1013)
.+.++..+......... ....++.++|++ ++. ..+.+. ..++..+. .+++++||+.+ .||+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~--------~~~~~~~~~~~~i~~~g~~~~----~k~~ 214 (381)
T COG0438 151 ADRVIAVSPALKELLEALGVPNKIVVIPNG-IDT---EKFAPA--------RIGLLPEGGKFVVLYVGRLDP----EKGL 214 (381)
T ss_pred ccEEEECCHHHHHHHHHhCCCCCceEecCC-cCH---HHcCcc--------ccCCCcccCceEEEEeeccCh----hcCH
Confidence 55666665543222222 222367778876 665 443321 22333333 79999999755 6999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcc--cHHHHHHHccEEEEcc
Q 001781 431 AVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG--DVNGVLLMADIVLYGS 508 (1013)
Q Consensus 431 dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~e--Dl~~lLaaADIfVlPS 508 (1013)
+.+++++..+.... ++++ ++++|.++.. .+.+.+++.+++..+ +|.|.|..+ ++..+++.||++++||
T Consensus 215 ~~~i~~~~~~~~~~-------~~~~-~~~~g~~~~~-~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~~~~~v~ps 284 (381)
T COG0438 215 DLLIEAAAKLKKRG-------PDIK-LVIVGDGPER-REELEKLAKKLGLED-NVKFLGYVPDEELAELLASADVFVLPS 284 (381)
T ss_pred HHHHHHHHHhhhhc-------CCeE-EEEEcCCCcc-HHHHHHHHHHhCCCC-cEEEecccCHHHHHHHHHhCCEEEecc
Confidence 99999999886553 3467 5688988763 356777888888766 899999654 7788999999999999
Q ss_pred CCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HHH
Q 001781 509 SQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRL-HAK 587 (1013)
Q Consensus 509 ~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe-~ae 587 (1013)
..| +||++++|||++|+|||+++.++..|++.++.+|+++++.+.+++++++..++++.+. .+.+++.+++ ...
T Consensus 285 ~~e--~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 359 (381)
T COG0438 285 LSE--GFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPEL---REELGEAARERVEE 359 (381)
T ss_pred ccc--cchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHH
Confidence 987 9999999999999999999999999999988778877777899999999999998854 4677765555 447
Q ss_pred hhcHHHHHHHHHHHHHHHhc
Q 001781 588 NMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 588 ~fs~e~~~~~y~~Lye~lL~ 607 (1013)
.+.|++....+.+++.....
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 360 EFSWERIAEQLLELYEELLA 379 (381)
T ss_pred hcCHHHHHHHHHHHHHHHHh
Confidence 89999999999998887654
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-14 Score=161.15 Aligned_cols=291 Identities=11% Similarity=0.005 Sum_probs=184.8
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHHHHHHHHHHHhhcCc-cEEEEcCcchHH---HHHHHHHHhhhhcc
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQY-SLIDWSIFDGII---ADSLEAKEAISSLM 310 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~i~~Li~lLk~~kp-DIIh~~~~~~~l---v~~Laak~~~s~l~ 310 (1013)
.+....-.++.+.+.+.|++...+................+..++...++ |+||.+.+.... ...+..+...
T Consensus 15 ~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~---- 90 (333)
T PRK09814 15 SAALKAKNDVTKIAKQLGFEELGIYFYNIKRDSLSERSKRLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKK---- 90 (333)
T ss_pred chHHHHHHHHHHHHHHCCCeEeEEEecccccchHHHHHHHHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHH----
Confidence 45567778889999999999876644321111122223335566777788 899986643321 1222222221
Q ss_pred cCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCccc
Q 001781 311 QEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWA 388 (1013)
Q Consensus 311 qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~ 388 (1013)
.++|+|+++|+.... .... . ..........++.+|.+|+++..+.... .+++..++.++++. ...
T Consensus 91 ----~~~k~i~~ihD~~~~-~~~~--~---~~~~~~~~~~~~~aD~iI~~S~~~~~~l~~~g~~~~~i~~~~~~-~~~-- 157 (333)
T PRK09814 91 ----KQVKIIILIHDIEPL-RFDS--N---YYLMKEEIDMLNLADVLIVHSKKMKDRLVEEGLTTDKIIVQGIF-DYL-- 157 (333)
T ss_pred ----cCCEEEEEECCcHHH-hccc--c---chhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcCceEecccc-ccc--
Confidence 368999999995321 1100 0 0001123446788999999998876653 34455677766553 111
Q ss_pred ccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH
Q 001781 389 VEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN 468 (1013)
Q Consensus 389 ~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~ 468 (1013)
....+ + ..+...+.|+|+|++. |... +. . ..++++ ++++|+|+..
T Consensus 158 -~~~~~-------~---~~~~~~~~i~yaG~l~------k~~~--l~------~-------~~~~~~-l~i~G~g~~~-- 202 (333)
T PRK09814 158 -NDIEL-------V---KTPSFQKKINFAGNLE------KSPF--LK------N-------WSQGIK-LTVFGPNPED-- 202 (333)
T ss_pred -ccccc-------c---ccccCCceEEEecChh------hchH--HH------h-------cCCCCe-EEEECCCccc--
Confidence 11100 0 0122456899999973 2111 11 1 015788 5699999864
Q ss_pred HHHHHHHHHcCCCCCcEEEcC--CcccHHHHHHHccEEEEccCC-------C--CCCccHHHHHHHHhCCCEEEcCCCCc
Q 001781 469 DALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQ-------V--EQGFPSLIVRAMTFGIPVITPDFPII 537 (1013)
Q Consensus 469 e~Lkela~eLgL~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~-------E--EEGFGivVLEAMA~G~PVIASdvgGi 537 (1013)
. ...+ +|+|.| +.+++..+|+. |+.+.+... | .-.+|.++.|+||||+|||+++.++.
T Consensus 203 ~---------~~~~-~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~ 271 (333)
T PRK09814 203 L---------ENSA-NISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAI 271 (333)
T ss_pred c---------ccCC-CeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccH
Confidence 2 2344 899999 45788888888 655543211 1 01579999999999999999999999
Q ss_pred hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHH
Q 001781 538 KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCV 595 (1013)
Q Consensus 538 ~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~ 595 (1013)
.++|.++.+|++++ +.++++++|..+. ++ ++.+|++++++.++....-..+
T Consensus 272 ~~~V~~~~~G~~v~--~~~el~~~l~~~~--~~---~~~~m~~n~~~~~~~~~~g~~~ 322 (333)
T PRK09814 272 ADFIVENGLGFVVD--SLEELPEIIDNIT--EE---EYQEMVENVKKISKLLRNGYFT 322 (333)
T ss_pred HHHHHhCCceEEeC--CHHHHHHHHHhcC--HH---HHHHHHHHHHHHHHHHhcchhH
Confidence 99999999999997 7889999999853 22 2588999999988776654443
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.4e-14 Score=167.37 Aligned_cols=288 Identities=7% Similarity=-0.003 Sum_probs=196.6
Q ss_pred HhhcCc-cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEE
Q 001781 279 LGQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 279 Lk~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~V 357 (1013)
+...++ |+|-.|.|+..++.....+.. ...++-+..|-. ++..-....+..-..++ ..+-.+|.|
T Consensus 127 ~~~~~~~d~vWVhDYhL~llp~~LR~~~---------~~~~IgfFlHiP-FPs~eifr~LP~r~~ll----~glL~aDli 192 (487)
T TIGR02398 127 CLEAAEGATVWVHDYNLWLVPGYIRQLR---------PDLKIAFFHHTP-FPSADVFNILPWREQII----GSLLCCDYI 192 (487)
T ss_pred HHhcCCCCEEEEecchhhHHHHHHHHhC---------CCCeEEEEeeCC-CCChHHHhhCCchHHHH----HHHhcCCeE
Confidence 334454 588889999999888887654 346777776763 22111011111111211 223345666
Q ss_pred EEcCCCchhhh-------cc--------------------------------CCCCCEEEeCCCCCCcccccccCcc---
Q 001781 358 VFPDYTLPMLY-------SV--------------------------------LDAGNFFVIPGSPADVWAVEAYSKS--- 395 (1013)
Q Consensus 358 I~~S~~~~~ly-------~~--------------------------------l~~~ki~VIPnggVDl~~~~~F~p~--- 395 (1013)
-|..+.....+ .+ -..-++.++|.+ ||+ +.|.+.
T Consensus 193 GFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiG-ID~---~~f~~~~~~ 268 (487)
T TIGR02398 193 GFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVG-TDP---ERIRSALAA 268 (487)
T ss_pred EeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECE-ecH---HHHHHHhcC
Confidence 55443322110 00 001125677876 887 666321
Q ss_pred ----hhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCC----c--
Q 001781 396 ----HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST----D-- 465 (1013)
Q Consensus 396 ----~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~----e-- 465 (1013)
.....+|++++ ++.+|++|+|+.. .||+...++|+..+++++++... +++|+ ++|... .
T Consensus 269 ~~~~~~~~~lr~~~~---~~kiIl~VDRLDy----~KGI~~kl~Afe~~L~~~Pe~~g---kv~Lv-qi~~psr~~v~~y 337 (487)
T TIGR02398 269 ASIREMMERIRSELA---GVKLILSAERVDY----TKGILEKLNAYERLLERRPELLG---KVTLV-TACVPAASGMTIY 337 (487)
T ss_pred chHHHHHHHHHHHcC---CceEEEEeccccc----ccCHHHHHHHHHHHHHhCccccC---ceEEE-EEeCCCcccchHH
Confidence 11345677777 5779999999976 89999999999999988754332 57854 555432 1
Q ss_pred -ccHHHHHHHHHHc-------CCCCCcEEEcCC--cccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC----CEEE
Q 001781 466 -GYNDALQEVASRL-------GLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI----PVIT 531 (1013)
Q Consensus 466 -~Y~e~Lkela~eL-------gL~dg~V~FlG~--~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~----PVIA 531 (1013)
.+..++++++.+. +..+ .+.+.+. .+++..+|+.|||++.+|..| |++++..|||+|+. |+|.
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~p-v~~~~~~v~~~el~alYr~ADV~lvT~lrD--GmNLVa~Eyva~~~~~~GvLIL 414 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTP-LQFFTRSLPYEEVSAWFAMADVMWITPLRD--GLNLVAKEYVAAQGLLDGVLVL 414 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCcc-EEEEcCCCCHHHHHHHHHhCCEEEECcccc--ccCcchhhHHhhhcCCCCCEEE
Confidence 1345556666654 4554 5677774 578999999999999999999 99999999999998 9999
Q ss_pred cCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Q 001781 532 PDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILE 603 (1013)
Q Consensus 532 SdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye 603 (1013)
|..+|..+.+. .+++++|.|++++|++|.++++++. +++++--++.++.+.++.....++.+..-+.
T Consensus 415 SefaGaa~~l~---~AllVNP~d~~~~A~ai~~AL~m~~--~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 415 SEFAGAAVELK---GALLTNPYDPVRMDETIYVALAMPK--AEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred eccccchhhcC---CCEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999987774 4899999999999999999999997 3445556666778888888888877665443
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-12 Score=148.05 Aligned_cols=310 Identities=13% Similarity=0.077 Sum_probs=186.7
Q ss_pred CCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCC-----------ch--------HH-------HHHHHHH
Q 001781 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN-----------SH--------SL-------WEQIAGQ 275 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~-----------~~--------~~-------~r~i~~L 275 (1013)
.++|.++.|.. |.-++--.+++.|++.++++.+++.+... .. .. ++.+...
T Consensus 5 ~~ki~i~aGgt---sGhi~paal~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~~~ 81 (385)
T TIGR00215 5 IPTIALVAGEA---SGDILGAGLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRKEV 81 (385)
T ss_pred CCeEEEEeCCc---cHHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 57787777654 33355458899999999999998765311 00 00 1223336
Q ss_pred HHHHhhcCccEEEEcCcchHHHHH-HHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccc
Q 001781 276 ISILGQEQYSLIDWSIFDGIIADS-LEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRV 354 (1013)
Q Consensus 276 i~lLk~~kpDIIh~~~~~~~lv~~-Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~A 354 (1013)
.+++++.+||+|....+.+.-+.. .+++. .++|+|+++.-..+ .|. ... .+.+ .+.+
T Consensus 82 ~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~----------~gip~v~~i~P~~w-aw~--~~~---~r~l------~~~~ 139 (385)
T TIGR00215 82 VQLAKQAKPDLLVGIDAPDFNLTKELKKKD----------PGIKIIYYISPQVW-AWR--KWR---AKKI------EKAT 139 (385)
T ss_pred HHHHHhcCCCEEEEeCCCCccHHHHHHHhh----------CCCCEEEEeCCcHh-hcC--cch---HHHH------HHHH
Confidence 678888999999998875433222 23322 46999976522111 111 000 1222 2346
Q ss_pred cEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEc-cCCCcCccccCHHHH
Q 001781 355 NVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVG-SSFFYNELSWDYAVA 433 (1013)
Q Consensus 355 D~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VG-Rl~~yk~~~Kg~dlL 433 (1013)
|.+++........+... ..+..++.|+..|. .......+...+++++++++.++|+++| +.. .+..|+...+
T Consensus 140 d~v~~~~~~e~~~~~~~-g~~~~~vGnPv~~~----~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~--aei~k~~~~l 212 (385)
T TIGR00215 140 DFLLAILPFEKAFYQKK-NVPCRFVGHPLLDA----IPLYKPDRKSAREKLGIDHNGETLALLPGSRG--SEVEKLFPLF 212 (385)
T ss_pred hHhhccCCCcHHHHHhc-CCCEEEECCchhhh----ccccCCCHHHHHHHcCCCCCCCEEEEECCCCH--HHHHHhHHHH
Confidence 77777777666555432 13556676652232 1111123455688899988887777664 221 1224778888
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCC
Q 001781 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQ 513 (1013)
Q Consensus 434 LeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEE 513 (1013)
++++..+.+.. |+++|++.++.+... +.++++.++++... .|.+.+. ++..+|++||++|++|
T Consensus 213 l~a~~~l~~~~-------p~~~~vi~~~~~~~~--~~~~~~~~~~~~~~-~v~~~~~--~~~~~l~aADl~V~~S----- 275 (385)
T TIGR00215 213 LKAAQLLEQQE-------PDLRRVLPVVNFKRR--LQFEQIKAEYGPDL-QLHLIDG--DARKAMFAADAALLAS----- 275 (385)
T ss_pred HHHHHHHHHhC-------CCeEEEEEeCCchhH--HHHHHHHHHhCCCC-cEEEECc--hHHHHHHhCCEEeecC-----
Confidence 88888775543 678865555555443 67777777777665 6776653 5678999999999998
Q ss_pred CccHHHHHHHHhCCCEEEcC-CCCch----------------hhhccCCeE--EEEcCCCHHHHHHHHHHHHhCc----c
Q 001781 514 GFPSLIVRAMTFGIPVITPD-FPIIK----------------EYVAEGAQV--IFFQKDNPEGLSRAFSLFISNG----K 570 (1013)
Q Consensus 514 GFGivVLEAMA~G~PVIASd-vgGi~----------------EiI~dG~~G--~Lv~p~D~eeLAeAI~~LL~d~----e 570 (1013)
|.+.+|+|+||+|+|... +..+. .++.+..-. ++-..-+++.+++.+.++++|+ +
T Consensus 276 --Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~ 353 (385)
T TIGR00215 276 --GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYK 353 (385)
T ss_pred --CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHH
Confidence 456679999999988762 22222 122221111 1112346899999999999998 6
Q ss_pred cHHHHHHHHHHHHHH
Q 001781 571 LSKFARTVASAGRLH 585 (1013)
Q Consensus 571 lR~~~~~Mg~aARe~ 585 (1013)
.+ ++|.+.-.+.
T Consensus 354 ~~---~~~~~~~~~~ 365 (385)
T TIGR00215 354 EM---HRERQFFEEL 365 (385)
T ss_pred HH---HHHHHHHHHH
Confidence 53 4444444333
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.8e-14 Score=137.65 Aligned_cols=133 Identities=25% Similarity=0.341 Sum_probs=95.1
Q ss_pred cEEEEEEccCCCcCccccCHHHHHH-HHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC
Q 001781 411 EIVVVVVGSSFFYNELSWDYAVAMH-DVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1013)
Q Consensus 411 ~~vIL~VGRl~~yk~~~Kg~dlLLe-Afa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG 489 (1013)
-++|+++|++.+ .|+.+.+++ ++..+.++. |+++ ++|+|.+++ .++++ ..+ +|+++|
T Consensus 2 ~~~i~~~g~~~~----~k~~~~li~~~~~~l~~~~-------p~~~-l~i~G~~~~----~l~~~-----~~~-~v~~~g 59 (135)
T PF13692_consen 2 ILYIGYLGRIRP----DKGLEELIEAALERLKEKH-------PDIE-LIIIGNGPD----ELKRL-----RRP-NVRFHG 59 (135)
T ss_dssp -EEEE--S-SSG----GGTHHHHHH-HHHHHHHHS-------TTEE-EEEECESS-----HHCCH-----HHC-TEEEE-
T ss_pred cccccccccccc----cccccchhhhHHHHHHHHC-------cCEE-EEEEeCCHH----HHHHh-----cCC-CEEEcC
Confidence 368899998754 799999999 998887765 6899 568888764 24444 123 899999
Q ss_pred CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhC
Q 001781 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1013)
Q Consensus 490 ~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d 568 (1013)
..+++.++|+.||++++|+...+ ++|.+++|||++|+|||+++. +..+++.....|+++ .+|+++++++|.++++|
T Consensus 60 ~~~e~~~~l~~~dv~l~p~~~~~-~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 60 FVEELPEILAAADVGLIPSRFNE-GFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLLND 135 (135)
T ss_dssp S-HHHHHHHHC-SEEEE-BSS-S-CC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHhCCEEEEEeeCCC-cCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence 88899999999999999997543 999999999999999999998 566666655678777 78999999999999876
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-11 Score=132.62 Aligned_cols=342 Identities=13% Similarity=0.092 Sum_probs=216.0
Q ss_pred CCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCC-CchHHH---------------------------HHHH
Q 001781 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSG-NSHSLW---------------------------EQIA 273 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g-~~~~~~---------------------------r~i~ 273 (1013)
+.-+++|.|+++.. -.+..-|..|.+.|++|.++++.+. +...+. +.+.
T Consensus 13 ~ra~vvVLGDvGRS---PRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~~~~~~p~~~~l~lKvf~ 89 (444)
T KOG2941|consen 13 KRAIVVVLGDVGRS---PRMQYHALSLAKLGFQVDLIGYVESIPLEELLNHPRIRIHGMPNLPFLQGGPRVLFLPLKVFW 89 (444)
T ss_pred ceEEEEEecccCCC---hHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcCCceEEEeCCCCcccCCCchhhhhHHHHHH
Confidence 44478999998554 4566678899999999999987543 211110 1111
Q ss_pred H----HHHHHhhcCccEEEEcCcchHH---HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccc-----cchhhhhhHH
Q 001781 274 G----QISILGQEQYSLIDWSIFDGII---ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANR-----LPVYVERGFQ 341 (1013)
Q Consensus 274 ~----Li~lLk~~kpDIIh~~~~~~~l---v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~-----l~~y~~~~l~ 341 (1013)
+ +..++-...+|+|...++++.. +..+.... ++.++|..-|+...... ..+.+..++.
T Consensus 90 Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l----------~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~ 159 (444)
T KOG2941|consen 90 QFLSLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSIL----------TGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLV 159 (444)
T ss_pred HHHHHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHH----------hcceEEEEehhhHHHHHHHhhcCCCCchHHHH
Confidence 1 2233334788898887766533 33333322 46889999999654311 1122333444
Q ss_pred HHHHHHHHHhccccEEEEcCCCchhh-hccCCCCCEEEeCCCCC----Ccc-cccccCc----------------chhHH
Q 001781 342 NLLSYWKSVFSRVNVIVFPDYTLPML-YSVLDAGNFFVIPGSPA----DVW-AVEAYSK----------------SHEKY 399 (1013)
Q Consensus 342 klLs~~~~~l~~AD~VI~~S~~~~~l-y~~l~~~ki~VIPnggV----Dl~-~~~~F~p----------------~~~~~ 399 (1013)
+++.++.. +.|++.+|.+..++.. ...+.-.+..|++.-|. ++- ..+.|.+ ..++.
T Consensus 160 ~~~E~~fg--k~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~t 237 (444)
T KOG2941|consen 160 RWLEKYFG--KLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERT 237 (444)
T ss_pred HHHHHHhh--cccccchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhh
Confidence 44444433 4477878877766533 22333234445543222 110 0011211 00111
Q ss_pred HHHHHcC------CCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHH
Q 001781 400 QLRKENG------FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQE 473 (1013)
Q Consensus 400 ~~R~~lg------i~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lke 473 (1013)
.+-++.. .+....+++..-+..+ ..++..+++|+...-++..+.-..-|.+- .+|.|+|+.+ +.+.+
T Consensus 238 af~~k~~s~~v~~~~~~pallvsSTswTp----DEdf~ILL~AL~~y~~~~~~~~~~lP~ll-ciITGKGPlk--E~Y~~ 310 (444)
T KOG2941|consen 238 AFTKKDASGDVQLLPERPALLVSSTSWTP----DEDFGILLEALVIYEEQLYDKTHNLPSLL-CIITGKGPLK--EKYSQ 310 (444)
T ss_pred hHhhhcccchhhhccCCCeEEEecCCCCC----cccHHHHHHHHHhhhhhhhhccCCCCcEE-EEEcCCCchh--HHHHH
Confidence 2222222 1223334444445444 57899999999866444332222336776 5799999987 99999
Q ss_pred HHHHcCCCCCcEEEcC---CcccHHHHHHHccEEEE--ccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEE
Q 001781 474 VASRLGLLEHSVRHYG---FNGDVNGVLLMADIVLY--GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVI 548 (1013)
Q Consensus 474 la~eLgL~dg~V~FlG---~~eDl~~lLaaADIfVl--PS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~ 548 (1013)
.++++++. +|.+.- ..+|.+.+++.||+.|+ +|... =..|++++.-..||+||+|-+...+.|+|.|++||+
T Consensus 311 ~I~~~~~~--~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSG-LDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGl 387 (444)
T KOG2941|consen 311 EIHEKNLQ--HVQVCTPWLEAEDYPKLLASADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGL 387 (444)
T ss_pred HHHHhccc--ceeeeecccccccchhHhhccccceEeeecCcc-cCcchhHHHhhcCCCceeeecchhHHHHHhcCCCce
Confidence 99999998 566655 66899999999998774 55543 257999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHHHh----CcccHHHHHHHHHHHHHHHHhhcHHHH
Q 001781 549 FFQKDNPEGLSRAFSLFIS----NGKLSKFARTVASAGRLHAKNMLALDC 594 (1013)
Q Consensus 549 Lv~p~D~eeLAeAI~~LL~----d~elR~~~~~Mg~aARe~ae~fs~e~~ 594 (1013)
+|. |.+++++.+.-+.+ +.. ++.++.+++++. ++..|++.
T Consensus 388 vF~--Ds~eLa~ql~~lf~~fp~~a~---~l~~lkkn~~e~-~e~RW~~~ 431 (444)
T KOG2941|consen 388 VFE--DSEELAEQLQMLFKNFPDNAD---ELNQLKKNLREE-QELRWDES 431 (444)
T ss_pred Eec--cHHHHHHHHHHHHhcCCCCHH---HHHHHHHhhHHH-HhhhHHHH
Confidence 996 99999999999998 333 357777777776 44445443
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-12 Score=157.74 Aligned_cols=293 Identities=10% Similarity=0.104 Sum_probs=190.3
Q ss_pred HhhcCc-cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEE
Q 001781 279 LGQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 279 Lk~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~V 357 (1013)
.+..++ |+|-.|.|+-.++..+..... ...++-+..|-.- +..-.+.-+..-..++ ..+-.||.|
T Consensus 226 ~~~~~~gD~VWVHDYHL~LlP~~LR~~~---------p~~~IGfFlHiPF-Ps~Eifr~LP~r~elL----~glL~aDlI 291 (934)
T PLN03064 226 NEHYEEGDVVWCHDYHLMFLPKCLKEYN---------SNMKVGWFLHTPF-PSSEIHRTLPSRSELL----RSVLAADLV 291 (934)
T ss_pred HHhcCCCCEEEEecchhhHHHHHHHHhC---------CCCcEEEEecCCC-CChHHHhhCCcHHHHH----HHHhcCCeE
Confidence 334555 488889999999988887664 4577888877742 2111111111112222 223356777
Q ss_pred EEcCCCchhhhc-------cCC--------CC---CEEEeCCCCCCcccccccCcc---h----hHHHHHHHcCCCCCcE
Q 001781 358 VFPDYTLPMLYS-------VLD--------AG---NFFVIPGSPADVWAVEAYSKS---H----EKYQLRKENGFLKDEI 412 (1013)
Q Consensus 358 I~~S~~~~~ly~-------~l~--------~~---ki~VIPnggVDl~~~~~F~p~---~----~~~~~R~~lgi~~d~~ 412 (1013)
-|.++.....+. +.. .+ ++.+.|-+ ||. +.|... + ....++++++ ++.
T Consensus 292 GFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiG-ID~---~~f~~~~~~~~v~~~~~~lr~~~~---g~k 364 (934)
T PLN03064 292 GFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIG-IDS---DRFIRALETPQVQQHIKELKERFA---GRK 364 (934)
T ss_pred EeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCE-EcH---HHHHHHhcChhHHHHHHHHHHHhC---Cce
Confidence 665543332200 000 11 23345554 777 666321 1 1235566655 567
Q ss_pred EEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEE----cCCCcc--cHHHHHHHHHHcC----CCC
Q 001781 413 VVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLC----GNSTDG--YNDALQEVASRLG----LLE 482 (1013)
Q Consensus 413 vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIv----G~G~e~--Y~e~Lkela~eLg----L~d 482 (1013)
+|+.|+|+.. .||+...++||..+++.+++... ++.|+.|+ +++++. +..++.+++.+.+ -.+
T Consensus 365 iIlgVDRLD~----~KGI~~kL~AfE~fL~~~Pe~r~---kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~ 437 (934)
T PLN03064 365 VMLGVDRLDM----IKGIPQKILAFEKFLEENPEWRD---KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLT 437 (934)
T ss_pred EEEEeecccc----ccCHHHHHHHHHHHHHhCccccC---CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCC
Confidence 9999999966 89999999999999888754322 34433222 222221 1122334343332 100
Q ss_pred -CcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC----CEEEcCCCCchhhhccCCeEEEEcCCC
Q 001781 483 -HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI----PVITPDFPIIKEYVAEGAQVIFFQKDN 554 (1013)
Q Consensus 483 -g~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~----PVIASdvgGi~EiI~dG~~G~Lv~p~D 554 (1013)
.-|+++. ..+++..+|+.||++++||..| |++++..|||+|+. ++|.|...|..+.+. ..+++++|.|
T Consensus 438 w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrD--GmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~--~~AllVNP~D 513 (934)
T PLN03064 438 AVPIHHLDRSLDFHALCALYAVTDVALVTSLRD--GMNLVSYEFVACQDSKKGVLILSEFAGAAQSLG--AGAILVNPWN 513 (934)
T ss_pred cceEEEeccCCCHHHHHHHHHhCCEEEeCcccc--ccCchHHHHHHhhcCCCCCeEEeCCCchHHHhC--CceEEECCCC
Confidence 0155544 4478999999999999999998 99999999999954 455599998888883 4599999999
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHH
Q 001781 555 PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 555 ~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~l 605 (1013)
++++|++|.++++++. ++++++.+++++.+..+.+...++.+.+-+...
T Consensus 514 ~~~vA~AI~~AL~M~~--~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~ 562 (934)
T PLN03064 514 ITEVAASIAQALNMPE--EEREKRHRHNFMHVTTHTAQEWAETFVSELNDT 562 (934)
T ss_pred HHHHHHHHHHHHhCCH--HHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 9999999999999766 446888899999999999999888877655554
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=155.71 Aligned_cols=166 Identities=11% Similarity=0.147 Sum_probs=146.8
Q ss_pred EEEEEEc--cCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc-ccHHHHHHHHHHcCCC-------
Q 001781 412 IVVVVVG--SSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD-GYNDALQEVASRLGLL------- 481 (1013)
Q Consensus 412 ~vIL~VG--Rl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e-~Y~e~Lkela~eLgL~------- 481 (1013)
..+++++ |+ + +|..+.+|+|+..+..++ |+++ |.+.|.+.+ .+.+.++++++++++.
T Consensus 320 ~~~I~v~idrL-~----ek~~~~~I~av~~~~~~~-------p~~~-L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~ 386 (519)
T TIGR03713 320 ETEIGFWIDGL-S----DEELQQILQQLLQYILKN-------PDYE-LKILTYNNDNDITQLLEDILEQINEEYNQDKNF 386 (519)
T ss_pred ceEEEEEcCCC-C----hHHHHHHHHHHHHHHhhC-------CCeE-EEEEEecCchhHHHHHHHHHHHHHhhhchhhhc
Confidence 3677777 98 7 799999999999998776 7899 678888763 4567888888888777
Q ss_pred ----------------------CCcEEEcCCcc--cHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCc
Q 001781 482 ----------------------EHSVRHYGFNG--DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII 537 (1013)
Q Consensus 482 ----------------------dg~V~FlG~~e--Dl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi 537 (1013)
+ +|.|.|... ++...|..+.++|.+|..| ||+ +++||++.|+|+| .-|.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~-~v~f~gy~~e~dl~~~~~~arl~id~s~~e--g~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 387 FSLSEQDENQPILQTDEEQKEKE-RIAFTTLTNEEDLISALDKLRLIIDLSKEP--DLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cccchhhhhhhcccchhhccccc-EEEEEecCCHHHHHHHHhhheEEEECCCCC--ChH-HHHHHHHcCCCee---ecCC
Confidence 5 899999877 9999999999999999998 999 9999999999999 5567
Q ss_pred hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 001781 538 KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1013)
Q Consensus 538 ~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Ly 602 (1013)
.++|.|++||+++ +|..+|+++|..+|.+++.+ .++...+.+.+++|+.++++.++.+++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~~w---n~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYLDNLKNW---NYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHH---HHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999 69999999999999999775 999999999999999999999887753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-10 Score=140.76 Aligned_cols=184 Identities=10% Similarity=0.001 Sum_probs=138.7
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcc------cHHHHHHHHHHcCC
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASRLGL 480 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~------Y~e~Lkela~eLgL 480 (1013)
+.++.+++++++|+.. .|+.+++++++..+.+... +...+++ +|++|++... +.+.+.+++++...
T Consensus 385 ~dpd~~~ig~v~Rl~~----yKr~dLil~~i~~l~~i~~---~~~~pvq-~V~~Gka~p~d~~gk~~i~~i~~la~~~~~ 456 (601)
T TIGR02094 385 LDPDVLTIGFARRFAT----YKRADLIFRDLERLARILN---NPERPVQ-IVFAGKAHPADGEGKEIIQRIVEFSKRPEF 456 (601)
T ss_pred cCCCCcEEEEEEcchh----hhhHHHHHHHHHHHHHHhh---CCCCCeE-EEEEEecCcccchHHHHHHHHHHHHhcccC
Confidence 4567889999999876 7999999999888865321 1113578 5799998765 56677777775556
Q ss_pred CCCcEEEcC-CcccHH-HHHHHccEEEE-ccC-CCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcC----
Q 001781 481 LEHSVRHYG-FNGDVN-GVLLMADIVLY-GSS-QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK---- 552 (1013)
Q Consensus 481 ~dg~V~FlG-~~eDl~-~lLaaADIfVl-PS~-~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p---- 552 (1013)
++ +|.|+- +...+. .+++.||++++ ||. +| .+|++-+-||..|.+.+++--|.+.|.. ++.|||.+.+
T Consensus 457 ~~-kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~E--acGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 457 RG-RIVFLENYDINLARYLVSGVDVWLNNPRRPLE--ASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEY 532 (601)
T ss_pred CC-CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcC--CchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccc
Confidence 66 777765 555554 68899999999 998 88 9999999999999999999888888876 5789999984
Q ss_pred --------CCHHHHHHHHHHHH-----hCccc--HHHHHHHHHHHHH-HHHhhcHHHHHHHHHHHH
Q 001781 553 --------DNPEGLSRAFSLFI-----SNGKL--SKFARTVASAGRL-HAKNMLALDCVTRYARIL 602 (1013)
Q Consensus 553 --------~D~eeLAeAI~~LL-----~d~el--R~~~~~Mg~aARe-~ae~fs~e~~~~~y~~Ly 602 (1013)
.|.++|.++|.+.+ ++++. .+.-.+|.+++-. .+..|+|.+++++|.++|
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999987655 23221 0011444444444 556899999999999887
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.9e-09 Score=118.09 Aligned_cols=322 Identities=17% Similarity=0.179 Sum_probs=205.8
Q ss_pred CceehHHHHHHHHHHC--CCEEEEEEcCCCCchH--------------HHHHHHHHHHHHhhcCccEEEEcC--cchHHH
Q 001781 236 SRSLLLITVVKNLQKL--GYVFKIYAVRSGNSHS--------------LWEQIAGQISILGQEQYSLIDWSI--FDGIIA 297 (1013)
Q Consensus 236 g~~l~vl~Lak~L~e~--GyeV~Vlt~~~g~~~~--------------~~r~i~~Li~lLk~~kpDIIh~~~--~~~~lv 297 (1013)
|.....+.+.+.|++. ++.+.+.+...-.... ++.....+.+.++..+||++.... .-+.++
T Consensus 60 GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~~~~v~rFl~~~~P~l~Ii~EtElWPnli 139 (419)
T COG1519 60 GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDLPIAVRRFLRKWRPKLLIIMETELWPNLI 139 (419)
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCchHHHHHHHHhcCCCEEEEEeccccHHHH
Confidence 4556677788888877 7777776543211110 012223356777788898554422 222233
Q ss_pred HHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEE
Q 001781 298 DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377 (1013)
Q Consensus 298 ~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~ 377 (1013)
..... .++|++.. .+ -++.+. ..++.++-...+..++..|.|++.+......+..+...++.
T Consensus 140 ~e~~~------------~~~p~~Lv-Na-RLS~rS----~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~~v~ 201 (419)
T COG1519 140 NELKR------------RGIPLVLV-NA-RLSDRS----FARYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKPVV 201 (419)
T ss_pred HHHHH------------cCCCEEEE-ee-eechhh----hHHHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCcceE
Confidence 33222 45787765 32 222222 23333444444557788899999999888888888877788
Q ss_pred EeCCCCCCcccccccCc-chhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEE
Q 001781 378 VIPGSPADVWAVEAYSK-SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKF 456 (1013)
Q Consensus 378 VIPnggVDl~~~~~F~p-~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikF 456 (1013)
+.-|...|+ +.-+. ......+|..++.+ +.+++..+. | ...-+.++++++.+++++ |++.
T Consensus 202 v~GNlKfd~---~~~~~~~~~~~~~r~~l~~~--r~v~iaaST----H--~GEeei~l~~~~~l~~~~-------~~~l- 262 (419)
T COG1519 202 VTGNLKFDI---EPPPQLAAELAALRRQLGGH--RPVWVAAST----H--EGEEEIILDAHQALKKQF-------PNLL- 262 (419)
T ss_pred EecceeecC---CCChhhHHHHHHHHHhcCCC--CceEEEecC----C--CchHHHHHHHHHHHHhhC-------CCce-
Confidence 877765444 21111 11234566766654 557777764 2 345677899999998776 6887
Q ss_pred EEEEcCCCcccHHHHHHHHHHcCCCC------------CcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHH
Q 001781 457 VFLCGNSTDGYNDALQEVASRLGLLE------------HSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMT 524 (1013)
Q Consensus 457 LVIvG~G~e~Y~e~Lkela~eLgL~d------------g~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA 524 (1013)
|++|-..+++ .+.+++++++.|+.- ..|.......++..+|+.|||.+.....-. --|-.++|+.+
T Consensus 263 lIlVPRHpER-f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~-~GGHN~LEpa~ 340 (419)
T COG1519 263 LILVPRHPER-FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVP-IGGHNPLEPAA 340 (419)
T ss_pred EEEecCChhh-HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccC-CCCCChhhHHH
Confidence 7899999988 788999999988741 123333344678899999999887644431 56888999999
Q ss_pred hCCCEEEcC----CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 001781 525 FGIPVITPD----FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYAR 600 (1013)
Q Consensus 525 ~G~PVIASd----vgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~ 600 (1013)
+|+|||.-. ...+.+-+...+.|+.++ |.+.++.++..+++|++. +++|++++.+++++.-- ..+++.+
T Consensus 341 ~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~---r~~~~~~~~~~v~~~~g--al~r~l~ 413 (419)
T COG1519 341 FGTPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLADEDK---REAYGRAGLEFLAQNRG--ALARTLE 413 (419)
T ss_pred cCCCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHH---HHHHHHHHHHHHHHhhH--HHHHHHH
Confidence 999999743 333444444444566665 688888888888888665 59999999997765443 3334444
Q ss_pred HHH
Q 001781 601 ILE 603 (1013)
Q Consensus 601 Lye 603 (1013)
.++
T Consensus 414 ~l~ 416 (419)
T COG1519 414 ALK 416 (419)
T ss_pred Hhh
Confidence 443
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-08 Score=115.20 Aligned_cols=297 Identities=19% Similarity=0.211 Sum_probs=181.2
Q ss_pred ehHHHHHHHHHHCCCE-EEEEEcCCCC-------------------------ch------HHHHHHHHHHHHHhhcCccE
Q 001781 239 LLLITVVKNLQKLGYV-FKIYAVRSGN-------------------------SH------SLWEQIAGQISILGQEQYSL 286 (1013)
Q Consensus 239 l~vl~Lak~L~e~Gye-V~Vlt~~~g~-------------------------~~------~~~r~i~~Li~lLk~~kpDI 286 (1013)
...+.+++.|.++|++ |.++...++. .. ..+..+....+++++++||+
T Consensus 15 ~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~a~~il~~~kPd~ 94 (357)
T COG0707 15 FPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFKLLKGVLQARKILKKLKPDV 94 (357)
T ss_pred hHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 4456789999999994 6665332211 00 11234444678999999998
Q ss_pred EEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchh
Q 001781 287 IDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPM 366 (1013)
Q Consensus 287 Ih~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ 366 (1013)
|............++++. .++|++. |+....... . .+++. +.++.|......
T Consensus 95 vig~Ggyvs~P~~~Aa~~----------~~iPv~i--hEqn~~~G~----a---nk~~~------~~a~~V~~~f~~--- 146 (357)
T COG0707 95 VIGTGGYVSGPVGIAAKL----------LGIPVII--HEQNAVPGL----A---NKILS------KFAKKVASAFPK--- 146 (357)
T ss_pred EEecCCccccHHHHHHHh----------CCCCEEE--EecCCCcch----h---HHHhH------Hhhceeeecccc---
Confidence 877443333344444433 3589885 554322111 1 12222 234454443332
Q ss_pred hhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhh
Q 001781 367 LYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYAR 446 (1013)
Q Consensus 367 ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~ 446 (1013)
.....+..++.++.+ ||.. +... ......+..... ++++|+++|. .-|...+-+++..+.....
T Consensus 147 ~~~~~~~~~~~~tG~-Pvr~---~~~~--~~~~~~~~~~~~--~~~~ilV~GG-------S~Ga~~ln~~v~~~~~~l~- 210 (357)
T COG0707 147 LEAGVKPENVVVTGI-PVRP---EFEE--LPAAEVRKDGRL--DKKTILVTGG-------SQGAKALNDLVPEALAKLA- 210 (357)
T ss_pred ccccCCCCceEEecC-cccH---Hhhc--cchhhhhhhccC--CCcEEEEECC-------cchhHHHHHHHHHHHHHhh-
Confidence 112334456666655 3554 2222 112222222222 6778888874 3566666666666655442
Q ss_pred cccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhC
Q 001781 447 RNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG 526 (1013)
Q Consensus 447 lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G 526 (1013)
.++.++.++|.+. .+.++..-.+++. +...++.+|+..+|++||++|.=+ -++++.|.+++|
T Consensus 211 -----~~~~v~~~~G~~~---~~~~~~~~~~~~~----~~v~~f~~dm~~~~~~ADLvIsRa------Ga~Ti~E~~a~g 272 (357)
T COG0707 211 -----NRIQVIHQTGKND---LEELKSAYNELGV----VRVLPFIDDMAALLAAADLVISRA------GALTIAELLALG 272 (357)
T ss_pred -----hCeEEEEEcCcch---HHHHHHHHhhcCc----EEEeeHHhhHHHHHHhccEEEeCC------cccHHHHHHHhC
Confidence 1477677788765 2455554444432 778888999999999999998764 357999999999
Q ss_pred CCEEEcCCCCc--------hhhhccCCeEEEEcCCC--HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHH
Q 001781 527 IPVITPDFPII--------KEYVAEGAQVIFFQKDN--PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVT 596 (1013)
Q Consensus 527 ~PVIASdvgGi--------~EiI~dG~~G~Lv~p~D--~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~ 596 (1013)
+|+|.-..+.. ...+++...|.+++..+ ++.+++.|.+++++++. +++|++++++.......++.+.
T Consensus 273 ~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~---l~~m~~~a~~~~~p~aa~~i~~ 349 (357)
T COG0707 273 VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEK---LKAMAENAKKLGKPDAAERIAD 349 (357)
T ss_pred CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHH---HHHHHHHHHhcCCCCHHHHHHH
Confidence 99997654432 34455556677776554 88999999999999765 5899999888777666666555
Q ss_pred HHHH
Q 001781 597 RYAR 600 (1013)
Q Consensus 597 ~y~~ 600 (1013)
....
T Consensus 350 ~~~~ 353 (357)
T COG0707 350 LLLA 353 (357)
T ss_pred HHHH
Confidence 4433
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-08 Score=121.12 Aligned_cols=301 Identities=14% Similarity=0.154 Sum_probs=163.3
Q ss_pred EEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCcccc-----------ccchhhhhh------HHHHHHHHH
Q 001781 286 LIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLAN-----------RLPVYVERG------FQNLLSYWK 348 (1013)
Q Consensus 286 IIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~-----------~l~~y~~~~------l~klLs~~~ 348 (1013)
+.|+|.+.+.+...+..+.. ..+..|+|.|-..+.+ .+..+.... +.......+
T Consensus 146 iaHfHEWmaG~gll~lr~~~---------~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEr 216 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRK---------PDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIER 216 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT----------SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHH
T ss_pred EEEechHhHhHHHHHHhccC---------CCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHH
Confidence 67888887766555554443 4588999999954321 111111111 111111122
Q ss_pred HHhccccEEEEcCCCchhhhc-cCCCCCEEEeCCCCCCcccccccCcchh--------HHHH----HHHc----CCC-CC
Q 001781 349 SVFSRVNVIVFPDYTLPMLYS-VLDAGNFFVIPGSPADVWAVEAYSKSHE--------KYQL----RKEN----GFL-KD 410 (1013)
Q Consensus 349 ~~l~~AD~VI~~S~~~~~ly~-~l~~~ki~VIPnggVDl~~~~~F~p~~~--------~~~~----R~~l----gi~-~d 410 (1013)
.....||..-++|......-. -+.+..=.|+||| ++. +.|+...+ +..+ +..+ .+. ++
T Consensus 217 aaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNG-l~v---~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~ 292 (633)
T PF05693_consen 217 AAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNG-LNV---DKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDK 292 (633)
T ss_dssp HHHHHSSEEEESSHHHHHHHHHHHSS--SEE-----B-G---GGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGG
T ss_pred HHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCC-ccc---cccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccc
Confidence 345678998888876655422 2334444788997 666 66554321 1111 2222 233 34
Q ss_pred cEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCccc----------H------------
Q 001781 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY----------N------------ 468 (1013)
Q Consensus 411 ~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y----------~------------ 468 (1013)
..+|...||. +=.+||.+.+|+|+++|............=+-|+ |+-.....+ .
T Consensus 293 tl~~ftsGRY---Ef~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFi-i~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~ 368 (633)
T PF05693_consen 293 TLYFFTSGRY---EFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFI-IVPAKTNSFNVESLKGQAVTKQLRDTVDEIQE 368 (633)
T ss_dssp EEEEEEESSS----TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEE-E---SEEEE-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeeece---eeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEE-EecCccCCcCHHHHhhHHHHHHHHHHHHHHHH
Confidence 5566667884 4447999999999999976543222211112233 333211100 0
Q ss_pred -------------------------------------------------------HHHHHHHHHcCCC----C-CcEEEc
Q 001781 469 -------------------------------------------------------DALQEVASRLGLL----E-HSVRHY 488 (1013)
Q Consensus 469 -------------------------------------------------------e~Lkela~eLgL~----d-g~V~Fl 488 (1013)
+.+-..++++++. + .+|+|+
T Consensus 369 ~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~ 448 (633)
T PF05693_consen 369 KIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFH 448 (633)
T ss_dssp HHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE-
T ss_pred HHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEe
Confidence 1111111112321 1 235666
Q ss_pred C---------CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc-----CCeEEEE-cC-
Q 001781 489 G---------FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE-----GAQVIFF-QK- 552 (1013)
Q Consensus 489 G---------~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d-----G~~G~Lv-~p- 552 (1013)
+ ..-+..+++..||+.|+||++| ++|.+.+|+.++|+|.|+||..|....+.+ ...|+.+ +-
T Consensus 449 P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYE--PWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~ 526 (633)
T PF05693_consen 449 PEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYE--PWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRR 526 (633)
T ss_dssp -S---TTSSSS-S-HHHHHHHSSEEEE--SSB--SS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SS
T ss_pred eccccCCCCCCCCCHHHHhccCceeeeccccc--cccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCC
Confidence 5 1235679999999999999999 999999999999999999999987655443 2345544 32
Q ss_pred -CC----HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 553 -DN----PEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 553 -~D----~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
.+ .+++++.|.++..... +.+..+.+++.+.++...|++....|.+.|..+|+
T Consensus 527 ~~n~~e~v~~la~~l~~f~~~~~--rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~ 584 (633)
T PF05693_consen 527 DKNYDESVNQLADFLYKFCQLSR--RQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALR 584 (633)
T ss_dssp SS-HHHHHHHHHHHHHHHHT--H--HHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 23 4556666666665554 34577778888899999999999999999988775
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.1e-08 Score=110.48 Aligned_cols=235 Identities=14% Similarity=0.139 Sum_probs=138.7
Q ss_pred HHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhcc
Q 001781 274 GQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1013)
Q Consensus 274 ~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~ 353 (1013)
...+++++++||+|+.+.....+...++++. .++|+++ |+....... . .+++ .+.
T Consensus 82 ~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~----------~~~p~~i--~e~n~~~g~----~---nr~~------~~~ 136 (352)
T PRK12446 82 DAYVRIRKLKPDVIFSKGGFVSVPVVIGGWL----------NRVPVLL--HESDMTPGL----A---NKIA------LRF 136 (352)
T ss_pred HHHHHHHhcCCCEEEecCchhhHHHHHHHHH----------cCCCEEE--ECCCCCccH----H---HHHH------HHh
Confidence 3557788999999999764444444555544 3588875 454211100 1 1222 233
Q ss_pred ccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHH
Q 001781 354 VNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVA 433 (1013)
Q Consensus 354 AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlL 433 (1013)
++.+.+.-.... ..++.+++.++.+ ||.. .|.. ..+...+..+++++++++|+.+|. .-|-..+
T Consensus 137 a~~v~~~f~~~~---~~~~~~k~~~tG~-Pvr~----~~~~-~~~~~~~~~~~l~~~~~~iLv~GG-------S~Ga~~i 200 (352)
T PRK12446 137 ASKIFVTFEEAA---KHLPKEKVIYTGS-PVRE----EVLK-GNREKGLAFLGFSRKKPVITIMGG-------SLGAKKI 200 (352)
T ss_pred hCEEEEEccchh---hhCCCCCeEEECC-cCCc----cccc-ccchHHHHhcCCCCCCcEEEEECC-------ccchHHH
Confidence 556544322211 2334567776644 4654 2221 123345567888888888888874 2344444
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc-ccHHHHHHHccEEEEccCCCC
Q 001781 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN-GDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 434 LeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~-eDl~~lLaaADIfVlPS~~EE 512 (1013)
-+++..++.... .++++++++|.... .+.+.. .. ++...++. +++..+|+.||++|.-
T Consensus 201 n~~~~~~l~~l~------~~~~vv~~~G~~~~--~~~~~~------~~--~~~~~~f~~~~m~~~~~~adlvIsr----- 259 (352)
T PRK12446 201 NETVREALPELL------LKYQIVHLCGKGNL--DDSLQN------KE--GYRQFEYVHGELPDILAITDFVISR----- 259 (352)
T ss_pred HHHHHHHHHhhc------cCcEEEEEeCCchH--HHHHhh------cC--CcEEecchhhhHHHHHHhCCEEEEC-----
Confidence 455554443331 24676777886532 122221 12 34445766 6899999999998876
Q ss_pred CCccHHHHHHHHhCCCEEEcCCC-----C----chhhhccCCeEEEEcC--CCHHHHHHHHHHHHhCccc
Q 001781 513 QGFPSLIVRAMTFGIPVITPDFP-----I----IKEYVAEGAQVIFFQK--DNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIASdvg-----G----i~EiI~dG~~G~Lv~p--~D~eeLAeAI~~LL~d~el 571 (1013)
+-+.++.|++++|+|.|.-... + ..+.+.+...|..+.. -+++.+++++.++++|++.
T Consensus 260 -~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~ 328 (352)
T PRK12446 260 -AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEK 328 (352)
T ss_pred -CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHH
Confidence 3367999999999999987542 1 2234444455655543 2578999999999988753
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-09 Score=100.59 Aligned_cols=90 Identities=26% Similarity=0.341 Sum_probs=80.8
Q ss_pred EEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001781 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1013)
Q Consensus 503 IfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aA 582 (1013)
+++.|+... +++..++|+||||+|||+++.++..+++.++.++++++ |++++.++|..+++|+++ +++|+++|
T Consensus 1 i~Ln~~~~~--~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~---~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSD--GPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEE---RRRIAKNA 73 (92)
T ss_pred CEeeCCCCC--CCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHH---HHHHHHHH
Confidence 467788876 99999999999999999999999999999999999997 999999999999999987 49999999
Q ss_pred HHHHH-hhcHHHHHHHHH
Q 001781 583 RLHAK-NMLALDCVTRYA 599 (1013)
Q Consensus 583 Re~ae-~fs~e~~~~~y~ 599 (1013)
++.++ +++++..++++.
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 99766 788888887764
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-07 Score=111.76 Aligned_cols=292 Identities=11% Similarity=0.080 Sum_probs=166.1
Q ss_pred HHhhcCcc-EEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccE
Q 001781 278 ILGQEQYS-LIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1013)
Q Consensus 278 lLk~~kpD-IIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~ 356 (1013)
++...+++ +|-.|.|+-.++..+..+.. ...++.+..|-+ ++..-...-+.....+ ...+-.||.
T Consensus 135 i~~~~~~~D~VWVhDYhL~llP~~LR~~~---------~~~~IgfFlHiP-FPs~e~fr~lP~r~ei----L~glL~aDl 200 (474)
T PF00982_consen 135 IAEVYRPGDLVWVHDYHLMLLPQMLRERG---------PDARIGFFLHIP-FPSSEIFRCLPWREEI----LRGLLGADL 200 (474)
T ss_dssp HGGG--TT-EEEEESGGGTTHHHHHHHTT-----------SEEEEEE-S-----HHHHTTSTTHHHH----HHHHTTSSE
T ss_pred HHHhCcCCCEEEEeCCcHHHHHHHHHhhc---------CCceEeeEEecC-CCCHHHHhhCCcHHHH----HHHhhcCCE
Confidence 33444554 88889999999888887655 457888887774 2211101111111222 223446788
Q ss_pred EEEcCCCchhh--------h----cc------CCC--CCEEEeCCCCCCcccccccCcc-------hhHHHHHHHcCCCC
Q 001781 357 IVFPDYTLPML--------Y----SV------LDA--GNFFVIPGSPADVWAVEAYSKS-------HEKYQLRKENGFLK 409 (1013)
Q Consensus 357 VI~~S~~~~~l--------y----~~------l~~--~ki~VIPnggVDl~~~~~F~p~-------~~~~~~R~~lgi~~ 409 (1013)
|-|.++..... . .. ... .++.+.|- |||. +.+... .....++..++ .
T Consensus 201 IgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pi-gId~---~~~~~~~~~~~v~~~~~~l~~~~~--~ 274 (474)
T PF00982_consen 201 IGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPI-GIDP---DAFAQLARSPEVQERAEELREKFK--G 274 (474)
T ss_dssp EEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE-------H---HHHHHHHH-S---HHHHHHHHHTT--T
T ss_pred EEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeec-cCCh---HHHHhhccChHHHHHHHHHHHhcC--C
Confidence 77755443322 0 00 001 12334454 4776 544221 11244555554 2
Q ss_pred CcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc------ccHHHHHHHHHHc----C
Q 001781 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD------GYNDALQEVASRL----G 479 (1013)
Q Consensus 410 d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e------~Y~e~Lkela~eL----g 479 (1013)
+..+|+.|.|+.. .||+..=+.||..+++++++... ++.|+.|+=.... .+..++++++.+. |
T Consensus 275 ~~~ii~gvDrld~----~kGi~~kl~Afe~fL~~~P~~~~---kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g 347 (474)
T PF00982_consen 275 KRKIIVGVDRLDY----TKGIPEKLRAFERFLERYPEYRG---KVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYG 347 (474)
T ss_dssp -SEEEEEE--B-G----GG-HHHHHHHHHHHHHH-GGGTT---TEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CcEEEEEeccchh----hcCHHHHHHHHHHHHHhCcCccC---cEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 3479999999866 89999999999999999987655 6775544333211 1234444444432 2
Q ss_pred CCC-CcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCC----EEEcCCCCchhhhccCCeEEEEc
Q 001781 480 LLE-HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP----VITPDFPIIKEYVAEGAQVIFFQ 551 (1013)
Q Consensus 480 L~d-g~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~P----VIASdvgGi~EiI~dG~~G~Lv~ 551 (1013)
-.+ .-|.++- ..+++..+|+.||+++.+|..+ |..++..|+.+|..+ +|.|...|..+.+.++ .++++
T Consensus 348 ~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrD--GmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~--al~VN 423 (474)
T PF00982_consen 348 TPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRD--GMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA--ALLVN 423 (474)
T ss_dssp BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSB--S--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS---EEE-
T ss_pred cCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhh--ccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc--cEEEC
Confidence 111 0144444 4578899999999999999998 999999999999876 7789988888888754 69999
Q ss_pred CCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 001781 552 KDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARIL 602 (1013)
Q Consensus 552 p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Ly 602 (1013)
|.|++++|++|.+.|+.+. ++++..-+..++.+.++.....++.+.+-+
T Consensus 424 P~d~~~~A~ai~~AL~M~~--~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 424 PWDIEEVADAIHEALTMPP--EERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp TT-HHHHHHHHHHHHT--H--HHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCH--HHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 9999999999999999987 445666677778888888888877665544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-08 Score=122.92 Aligned_cols=184 Identities=9% Similarity=-0.011 Sum_probs=135.3
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHH------HHHHHHHHcCC
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYND------ALQEVASRLGL 480 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e------~Lkela~eLgL 480 (1013)
+.++.++|+++.|+.. .|+.++++..+..+.+... +...+++ +|++|++...|.. .+.+++++..+
T Consensus 474 ldpd~ltigfarRfa~----YKR~~Lil~dl~rl~~il~---~~~~pvQ-~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~ 545 (778)
T cd04299 474 LDPNVLTIGFARRFAT----YKRATLLLRDPERLKRLLN---DPERPVQ-FIFAGKAHPADEPGKELIQEIVEFSRRPEF 545 (778)
T ss_pred cCCCccEEeeeecchh----hhhHHHHHHHHHHHHHHhh---CCCCCeE-EEEEEecCccchHHHHHHHHHHHHHhCcCC
Confidence 4567789999999866 7999999999888865431 1113588 5799997744333 55666665566
Q ss_pred CCCcEEEcC-CcccH-HHHHHHccEEEEccC--CCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcC----
Q 001781 481 LEHSVRHYG-FNGDV-NGVLLMADIVLYGSS--QVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQK---- 552 (1013)
Q Consensus 481 ~dg~V~FlG-~~eDl-~~lLaaADIfVlPS~--~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p---- 552 (1013)
.+ +|.|+- +...+ ..+++.||+.++||. +| .+|++-+-||.-|.+-+++--|.+.|.. ++.||+.+.+
T Consensus 546 ~~-kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~E--AsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~ 621 (778)
T cd04299 546 RG-RIVFLEDYDMALARHLVQGVDVWLNTPRRPLE--ASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEY 621 (778)
T ss_pred CC-cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCC--CCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccc
Confidence 65 788876 55444 468899999999999 77 9999999999999999999999999987 7899999987
Q ss_pred --------CCHHHHHHHHHHHHh----C------cccHHHHHHHHHHHHH-HHHhhcHHHHHHHHHH-HHHHH
Q 001781 553 --------DNPEGLSRAFSLFIS----N------GKLSKFARTVASAGRL-HAKNMLALDCVTRYAR-ILENV 605 (1013)
Q Consensus 553 --------~D~eeLAeAI~~LL~----d------~elR~~~~~Mg~aARe-~ae~fs~e~~~~~y~~-Lye~l 605 (1013)
.|.++|.+.|.+-+- + |..+ .+|.+++-. .+-.|++.++++.|.+ .|..+
T Consensus 622 ~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W---~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~ 691 (778)
T cd04299 622 EDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGW---VAMMKHSMATLGPRFSAERMVREYVERFYLPA 691 (778)
T ss_pred cChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHH---HHHHHHHHHhcccCCCHHHHHHHHHHHhHHHH
Confidence 456767677754332 2 3333 444444444 6779999999997755 66554
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.9e-08 Score=113.19 Aligned_cols=297 Identities=10% Similarity=0.025 Sum_probs=191.9
Q ss_pred HHhhcCc-cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccE
Q 001781 278 ILGQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNV 356 (1013)
Q Consensus 278 lLk~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~ 356 (1013)
+....++ |+|-.|.|+..++.....+.. ...++-+..|-.-..... ...+..-..++ ..+-.+|.
T Consensus 117 v~~~~~~~D~VWVHDYhL~llp~~LR~~~---------~~~~IgFFlHiPFPs~ei-fr~LP~r~eil----~glL~aDl 182 (474)
T PRK10117 117 LLPLLKDDDIIWIHDYHLLPFASELRKRG---------VNNRIGFFLHIPFPTPEI-FNALPPHDELL----EQLCDYDL 182 (474)
T ss_pred HHHhcCCCCEEEEeccHhhHHHHHHHHhC---------CCCcEEEEEeCCCCChHH-HhhCCChHHHH----HHHHhCcc
Confidence 3334455 588889999999888887654 456788877774211111 11111112222 12334566
Q ss_pred EEEcCCCchhhh-------ccC----------CC--CCEEEeCCCCCCcccccccCc---ch---hHHHHHHHcCCCCCc
Q 001781 357 IVFPDYTLPMLY-------SVL----------DA--GNFFVIPGSPADVWAVEAYSK---SH---EKYQLRKENGFLKDE 411 (1013)
Q Consensus 357 VI~~S~~~~~ly-------~~l----------~~--~ki~VIPnggVDl~~~~~F~p---~~---~~~~~R~~lgi~~d~ 411 (1013)
|-|.++.....+ .+. .. .++.+.|- |||. +.|.. .+ ....+++.++ ++
T Consensus 183 IGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~Pi-gID~---~~~~~~a~~~~~~~~~~lr~~~~---~~ 255 (474)
T PRK10117 183 LGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPI-GIEP---DEIAKQAAGPLPPKLAQLKAELK---NV 255 (474)
T ss_pred ceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEEC-eEcH---HHHHHHhhchHHHHHHHHHHHcC---CC
Confidence 655443322110 000 00 12334454 4776 55422 11 1234455554 46
Q ss_pred EEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCC---c---ccHHHHHHHHHHcCC----C
Q 001781 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNST---D---GYNDALQEVASRLGL----L 481 (1013)
Q Consensus 412 ~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~---e---~Y~e~Lkela~eLgL----~ 481 (1013)
.+|+.|.|+.. .||+..=++||..+++.+++... ++.|+.|+-... . .+..++++++.+.+- .
T Consensus 256 ~lilgVDRLDy----tKGi~~rl~Afe~fL~~~Pe~~g---kvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~ 328 (474)
T PRK10117 256 QNIFSVERLDY----SKGLPERFLAYEALLEKYPQHHG---KIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQL 328 (474)
T ss_pred eEEEEeccccc----ccCHHHHHHHHHHHHHhChhhcC---CEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCC
Confidence 79999999866 79999999999999999877655 577554433211 1 123444444544321 1
Q ss_pred C-CcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC-----CEEEcCCCCchhhhccCCeEEEEcC
Q 001781 482 E-HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-----PVITPDFPIIKEYVAEGAQVIFFQK 552 (1013)
Q Consensus 482 d-g~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~-----PVIASdvgGi~EiI~dG~~G~Lv~p 552 (1013)
+ .-|++.- +.+++..+|+.||+++.++..+ |+.++..|+.||.. ++|.|...|..+.+. .+++++|
T Consensus 329 ~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRD--GMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP 403 (474)
T PRK10117 329 GWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRD--GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNP 403 (474)
T ss_pred CceeEEEecCCCCHHHHHHHHHhccEEEeccccc--ccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECC
Confidence 1 0155544 4477889999999999999998 99999999999976 378899888888775 3899999
Q ss_pred CCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhcCC
Q 001781 553 DNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFP 609 (1013)
Q Consensus 553 ~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~~p 609 (1013)
.|.+++|++|.+.++++. +++++.-+..++.+.++.....++.+.+-+..+...+
T Consensus 404 ~d~~~~A~Ai~~AL~Mp~--~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~~ 458 (474)
T PRK10117 404 YDRDEVAAALDRALTMPL--AERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRS 458 (474)
T ss_pred CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhcC
Confidence 999999999999999987 4456666677788899999988888887777664433
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.2e-07 Score=105.05 Aligned_cols=299 Identities=16% Similarity=0.122 Sum_probs=170.2
Q ss_pred CCceehHHHHHHHHHH--CCCEEE---EEEcCCC----------Cch-------------HHH--------HHHHHHHHH
Q 001781 235 DSRSLLLITVVKNLQK--LGYVFK---IYAVRSG----------NSH-------------SLW--------EQIAGQISI 278 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e--~GyeV~---Vlt~~~g----------~~~-------------~~~--------r~i~~Li~l 278 (1013)
.|..+.-+.+++.|++ .|++|. .++.+.+ +.. ..+ ..+..-.++
T Consensus 7 hged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g~~~~~~sgg~~~~~~~~~~~~~~~gl~~~~~~~~~~ 86 (396)
T TIGR03492 7 HGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGLTLGQWRA 86 (396)
T ss_pred chHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeCCCCCCCCCCccCCCHHHHHHHHHhhHHHHHHHHHHH
Confidence 4667788889999988 699999 6654322 100 001 112223456
Q ss_pred Hhhc--CccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEE-EEcCCccc-----cc--cchh-hhhhHH--HHHH
Q 001781 279 LGQE--QYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVW-IIQEDSLA-----NR--LPVY-VERGFQ--NLLS 345 (1013)
Q Consensus 279 Lk~~--kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~-tvHg~~l~-----~~--l~~y-~~~~l~--klLs 345 (1013)
+++. +||+|.... .++..++++.. ++|++. ..|+.... .+ ...| ...+.. -+ .
T Consensus 87 ~~~~~~~p~~v~~~G---g~v~~~aA~~~----------~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~-e 152 (396)
T TIGR03492 87 LRKWAKKGDLIVAVG---DIVPLLFAWLS----------GKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW-E 152 (396)
T ss_pred HHHHhhcCCEEEEEC---cHHHHHHHHHc----------CCCceEEEeeccceeecCCCCCccchhhhccCCCccCHH-H
Confidence 6777 999887643 23344444433 355543 44664322 00 0000 000000 00 1
Q ss_pred HHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEE-ccCCCcC
Q 001781 346 YWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVV-GSSFFYN 424 (1013)
Q Consensus 346 ~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~V-GRl~~yk 424 (1013)
+++..-+.|+.|.+........+... ..++.++-|.-.|. ..... + .+++++.++|+.+ |+...
T Consensus 153 ~n~l~~~~a~~v~~~~~~t~~~l~~~-g~k~~~vGnPv~d~----l~~~~--~------~~l~~~~~~lllLpGSR~a-- 217 (396)
T TIGR03492 153 RWLMRSRRCLAVFVRDRLTARDLRRQ-GVRASYLGNPMMDG----LEPPE--R------KPLLTGRFRIALLPGSRPP-- 217 (396)
T ss_pred HHHhhchhhCEEeCCCHHHHHHHHHC-CCeEEEeCcCHHhc----Ccccc--c------cccCCCCCEEEEECCCCHH--
Confidence 22333355778777776655554322 23677787653332 11111 1 0454454455555 44322
Q ss_pred ccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCC-------------CcEEEcCCc
Q 001781 425 ELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLE-------------HSVRHYGFN 491 (1013)
Q Consensus 425 ~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~d-------------g~V~FlG~~ 491 (1013)
+..++...+++++..+.++ +++.|++.+..+.. .+.+++..++.++.. +.+.+..+.
T Consensus 218 e~~~~lp~~l~al~~L~~~--------~~~~~v~~~~~~~~--~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~ 287 (396)
T TIGR03492 218 EAYRNLKLLLRALEALPDS--------QPFVFLAAIVPSLS--LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR 287 (396)
T ss_pred HHHccHHHHHHHHHHHhhC--------CCeEEEEEeCCCCC--HHHHHHHHHhcCceecCCccccchhhccCceEEEech
Confidence 3335667888888777322 47787766644443 266777776656531 136666667
Q ss_pred ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCc---hhhhcc-----CCeEEEEcCCCHHHHHHHHH
Q 001781 492 GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII---KEYVAE-----GAQVIFFQKDNPEGLSRAFS 563 (1013)
Q Consensus 492 eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi---~EiI~d-----G~~G~Lv~p~D~eeLAeAI~ 563 (1013)
.++..+|+.||++|..| |.+..|++++|+|+|....++. ..+.+. + .+..+...+++.+++++.
T Consensus 288 ~~~~~~l~~ADlvI~rS-------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~ 359 (396)
T TIGR03492 288 GAFAEILHWADLGIAMA-------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVR 359 (396)
T ss_pred HhHHHHHHhCCEEEECc-------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHH
Confidence 78999999999999986 2455999999999999764433 122222 2 344445577899999999
Q ss_pred HHHhCcccHHHHHHHHHHHH
Q 001781 564 LFISNGKLSKFARTVASAGR 583 (1013)
Q Consensus 564 ~LL~d~elR~~~~~Mg~aAR 583 (1013)
++++|++. +++|.++++
T Consensus 360 ~ll~d~~~---~~~~~~~~~ 376 (396)
T TIGR03492 360 QLLADPEL---LERCRRNGQ 376 (396)
T ss_pred HHHcCHHH---HHHHHHHHH
Confidence 99998875 366664433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.8e-08 Score=114.11 Aligned_cols=173 Identities=11% Similarity=0.134 Sum_probs=127.5
Q ss_pred ccccEEEEcCCCchh-hhccCC-CCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccC
Q 001781 352 SRVNVIVFPDYTLPM-LYSVLD-AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429 (1013)
Q Consensus 352 ~~AD~VI~~S~~~~~-ly~~l~-~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg 429 (1013)
.+.|.||+++..... +...++ ..++.+||.+-+ +... .. .....-+++++.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i-------~~~~--~~--------~r~~~~~l~~t~---------- 290 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYL-------YPFK--KD--------NKYRKQALILTN---------- 290 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEE-------Eeec--cc--------cCCcccEEEECC----------
Confidence 567889988755332 322333 456777877611 2110 00 011224666651
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcc-cHHHHHHHccEEEEcc
Q 001781 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNG-DVNGVLLMADIVLYGS 508 (1013)
Q Consensus 430 ~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~e-Dl~~lLaaADIfVlPS 508 (1013)
+..|+++..+.+++ |+++|- | |-+.+- ...|+++ +++ ++ .+.+.|... ++.++|..||+++..|
T Consensus 291 -s~~I~~i~~Lv~~l-------Pd~~f~-I-ga~te~-s~kL~~L-~~y--~n-vvly~~~~~~~l~~ly~~~dlyLdin 355 (438)
T TIGR02919 291 -SDQIEHLEEIVQAL-------PDYHFH-I-AALTEM-SSKLMSL-DKY--DN-VKLYPNITTQKIQELYQTCDIYLDIN 355 (438)
T ss_pred -HHHHHHHHHHHHhC-------CCcEEE-E-EecCcc-cHHHHHH-Hhc--CC-cEEECCcChHHHHHHHHhccEEEEcc
Confidence 56899999998887 799954 5 766652 2788888 655 54 778888665 8999999999999999
Q ss_pred CCCCCCccHHHHHHHHhCCCEEEcCCC-CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCccc
Q 001781 509 SQVEQGFPSLIVRAMTFGIPVITPDFP-IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 509 ~~EEEGFGivVLEAMA~G~PVIASdvg-Gi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~el 571 (1013)
..| +|++++.|||+.|+|||+.+.. |..+++.+ |.+++.+++++|+++|.++++++++
T Consensus 356 ~~e--~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 356 HGN--EILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred ccc--cHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcCHHH
Confidence 998 9999999999999999999854 56677775 8899999999999999999999975
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.4e-07 Score=107.42 Aligned_cols=325 Identities=14% Similarity=0.146 Sum_probs=197.7
Q ss_pred CCCCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHHHHH---------------HHHHHHHHhhcCc
Q 001781 220 VRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQ---------------IAGQISILGQEQY 284 (1013)
Q Consensus 220 ~r~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~r~---------------i~~Li~lLk~~kp 284 (1013)
-+..||.+|.+++-..+.+..+..+.+.+.+...+|..+..+.......... ...+...|+....
T Consensus 257 ~~rlRvGylS~dlr~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~~~~dd~e~a~~I~~d~I 336 (620)
T COG3914 257 GKRLRVGYLSSDLRSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPIGRMDDAEIANAIRTDGI 336 (620)
T ss_pred ccceeEEEeccccccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheeccCCcCHHHHHHHHHhcCC
Confidence 3568899999999999999999999999999999999997763221111111 1124555666667
Q ss_pred cE-EEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCC-
Q 001781 285 SL-IDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDY- 362 (1013)
Q Consensus 285 DI-Ih~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~- 362 (1013)
|| |+...+.......+.+. +..||..+.-+.+-... ....|++|...+
T Consensus 337 dILvDl~g~T~d~r~~v~A~-----------RpAPiqvswlGy~aT~g-------------------~p~~DY~I~D~y~ 386 (620)
T COG3914 337 DILVDLDGHTVDTRCQVFAH-----------RPAPIQVSWLGYPATTG-------------------SPNMDYFISDPYT 386 (620)
T ss_pred eEEEeccCceeccchhhhhc-----------CCCceEEeecccccccC-------------------CCcceEEeeCcee
Confidence 73 34433332222222221 33566666444321111 123444444322
Q ss_pred ---CchhhhccCCCCCEEEeCCC--CCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHH
Q 001781 363 ---TLPMLYSVLDAGNFFVIPGS--PADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437 (1013)
Q Consensus 363 ---~~~~ly~~l~~~ki~VIPng--gVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAf 437 (1013)
.....| .+++--+|.. |+ +.+.+.... --|..+|++++.++++.+++. .|-...+++-.
T Consensus 387 vPp~ae~yy----sEkl~RLp~cy~p~-----d~~~~v~p~-~sR~~lglp~~avVf~c~~n~------~K~~pev~~~w 450 (620)
T COG3914 387 VPPTAEEYY----SEKLWRLPQCYQPV-----DGFEPVTPP-PSRAQLGLPEDAVVFCCFNNY------FKITPEVFALW 450 (620)
T ss_pred cCchHHHHH----HHHHHhcccccCCC-----CCcccCCCC-cchhhcCCCCCeEEEEecCCc------ccCCHHHHHHH
Confidence 222222 1223333311 12 223221111 236679999999998888865 45566677777
Q ss_pred HHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC--CcccHHHHHHHccEEEEccCCCCCCc
Q 001781 438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGF 515 (1013)
Q Consensus 438 a~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~EEEGF 515 (1013)
.+++++. |+-.|++..|.+.....+.|++++++.|+...+++|.+ +.++..+.|..||+++=+--+ |-
T Consensus 451 mqIL~~v-------P~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY---~g 520 (620)
T COG3914 451 MQILSAV-------PNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPY---GG 520 (620)
T ss_pred HHHHHhC-------CCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccC---CC
Confidence 7777776 67776656665454456889999999999877999999 446677899999999866444 55
Q ss_pred cHHHHHHHHhCCCEEE-------cCCCCchhhhc-cCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-
Q 001781 516 PSLIVRAMTFGIPVIT-------PDFPIIKEYVA-EGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHA- 586 (1013)
Q Consensus 516 GivVLEAMA~G~PVIA-------SdvgGi~EiI~-dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a- 586 (1013)
..+.+||+-||+|||+ +.+|+. ++. -|..-+++ .+.+++++.-..+-+|..++ ++....-++..
T Consensus 521 ~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA--~s~~dYV~~av~~g~dral~---q~~r~~l~~~r~ 593 (620)
T COG3914 521 HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVA--DSRADYVEKAVAFGSDRALR---QQVRAELKRSRQ 593 (620)
T ss_pred ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhc--CCHHHHHHHHHHhcccHHHH---HhhHHHHHhccc
Confidence 6889999999999996 233321 122 12333334 37788877777777777553 44433333322
Q ss_pred --HhhcHHHHHHHHHHHHHHHhc
Q 001781 587 --KNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 587 --e~fs~e~~~~~y~~Lye~lL~ 607 (1013)
.=|..+..++++..+|.++.+
T Consensus 594 tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 594 TSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred cCcccCHHHHHHHHHHHHHHHHH
Confidence 223346667788888887754
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-06 Score=109.20 Aligned_cols=293 Identities=9% Similarity=0.026 Sum_probs=188.0
Q ss_pred hhcCc--cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEE
Q 001781 280 GQEQY--SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 280 k~~kp--DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~V 357 (1013)
...++ |+|-.|.|+-.++..+..+.. ...++-+..|-. ++..-.+..+..-..++ ..+-.||.|
T Consensus 196 ~~~~~~~d~VWVhDYhL~llP~~LR~~~---------~~~~IgfFlHiP-FPs~eifr~LP~r~eiL----~glL~aDlI 261 (854)
T PLN02205 196 EVINPEDDFVWIHDYHLMVLPTFLRKRF---------NRVKLGFFLHSP-FPSSEIYKTLPIREELL----RALLNSDLI 261 (854)
T ss_pred HHhCCCCCEEEEeCchhhHHHHHHHhhC---------CCCcEEEEecCC-CCChHHHhhCCcHHHHH----HHHhcCCeE
Confidence 33455 699999999999888887654 457788887774 22111111111112222 224457777
Q ss_pred EEcCCCchhhh-------ccCC---------------CCCEEEeCCCCCCcccccccCc---ch----hHHHHHHHcCCC
Q 001781 358 VFPDYTLPMLY-------SVLD---------------AGNFFVIPGSPADVWAVEAYSK---SH----EKYQLRKENGFL 408 (1013)
Q Consensus 358 I~~S~~~~~ly-------~~l~---------------~~ki~VIPnggVDl~~~~~F~p---~~----~~~~~R~~lgi~ 408 (1013)
=|..+.....+ .++. ..++.+.|- |||. ..|.. .+ ...+++++++-
T Consensus 262 GFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~Pi-gId~---~~~~~~~~~~~~~~~~~~l~~~~~~- 336 (854)
T PLN02205 262 GFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPV-GIHM---GQLQSVLSLPETEAKVKELIKQFCD- 336 (854)
T ss_pred EecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeC-eEcH---HHHHHHhcChhHHHHHHHHHHHhcc-
Confidence 77554433220 0110 012334454 4776 55422 11 12344555542
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc------ccHHHHHHHHHHcC---
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD------GYNDALQEVASRLG--- 479 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e------~Y~e~Lkela~eLg--- 479 (1013)
+++.+|+.|.|+.. .||+..=+.||..+++++++... ++.|+.|+-+... .+..++++++.+.+
T Consensus 337 ~~~~~ilgVDrlD~----~KGi~~kl~A~e~~L~~~P~~~g---kvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~f 409 (854)
T PLN02205 337 QDRIMLLGVDDMDI----FKGISLKLLAMEQLLMQHPEWQG---KVVLVQIANPARGKGKDVKEVQAETHSTVKRINETF 409 (854)
T ss_pred CCCEEEEEccCccc----ccCHHHHHHHHHHHHHhCccccC---CEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhc
Confidence 35679999999866 79999999999999999876544 5665544433211 12233444544422
Q ss_pred -CCC-CcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC-------------------CEEEcCCC
Q 001781 480 -LLE-HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI-------------------PVITPDFP 535 (1013)
Q Consensus 480 -L~d-g~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~-------------------PVIASdvg 535 (1013)
-.+ .-|+++- +.+++..+|+.||+++.++..+ |+.++..|+.+|.. .+|.|...
T Consensus 410 g~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRD--GMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfa 487 (854)
T PLN02205 410 GKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRD--GMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFI 487 (854)
T ss_pred CCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccc--cccccchheeEEccCccccccccccccccCCCCceEeeecc
Confidence 110 0255554 4578999999999999999998 99999999999864 36778887
Q ss_pred CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHH
Q 001781 536 IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 536 Gi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~l 605 (1013)
|....+. ..++++|.|++++|++|.+.|+++.. +++.--++.++++.++.....++.+..-++.+
T Consensus 488 Gaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~m~~~--Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~ 552 (854)
T PLN02205 488 GCSPSLS---GAIRVNPWNIDAVADAMDSALEMAEP--EKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 552 (854)
T ss_pred chhHHhC---cCeEECCCCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 7776664 38999999999999999999999873 34555566777888888777777665555444
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.9e-06 Score=93.77 Aligned_cols=251 Identities=14% Similarity=0.067 Sum_probs=144.0
Q ss_pred HHHHHHHHHHhhcCccEEEEcC-cchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHH
Q 001781 270 EQIAGQISILGQEQYSLIDWSI-FDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWK 348 (1013)
Q Consensus 270 r~i~~Li~lLk~~kpDIIh~~~-~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~ 348 (1013)
..+..+.+++.+.+||+|..+. ....+...+++.. .++|++.. |+........ .....+..
T Consensus 80 ~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~----------~~IPv~Hv-eaG~rs~~~~-------eE~~r~~i 141 (365)
T TIGR03568 80 LTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAAL----------LNIPIAHI-HGGEVTEGAI-------DESIRHAI 141 (365)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----------hCCcEEEE-ECCccCCCCc-------hHHHHHHH
Confidence 3345577888999999887766 3334455555544 35898854 6643221110 11111111
Q ss_pred HHhccccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCC-cEEEEEEccCCCcCc
Q 001781 349 SVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKD-EIVVVVVGSSFFYNE 425 (1013)
Q Consensus 349 ~~l~~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d-~~vIL~VGRl~~yk~ 425 (1013)
..+ |+..++++...... ..+.+..+++++-|..+|.. .......+..+.++++++.+ +.+++.+-+-.. .
T Consensus 142 ~~l--a~l~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l---~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~--~ 214 (365)
T TIGR03568 142 TKL--SHLHFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNI---LSLDLLSKEELEEKLGIDLDKPYALVTFHPVTL--E 214 (365)
T ss_pred HHH--HhhccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHH---HhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcc--c
Confidence 222 45556666554443 24666778999988766652 11111234567788888744 444444543211 0
Q ss_pred cccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCC-CCCcEEEcC--CcccHHHHHHHcc
Q 001781 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL-LEHSVRHYG--FNGDVNGVLLMAD 502 (1013)
Q Consensus 426 ~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL-~dg~V~FlG--~~eDl~~lLaaAD 502 (1013)
..+..+.+.+.++.+.+. . .++. ++.-..++.. ..+.+.++++.- .+ +|.+++ ...++..+++.|+
T Consensus 215 ~~~~~~~l~~li~~L~~~-~------~~~~-vi~P~~~p~~--~~i~~~i~~~~~~~~-~v~l~~~l~~~~~l~Ll~~a~ 283 (365)
T TIGR03568 215 KESAEEQIKELLKALDEL-N------KNYI-FTYPNADAGS--RIINEAIEEYVNEHP-NFRLFKSLGQERYLSLLKNAD 283 (365)
T ss_pred ccCchHHHHHHHHHHHHh-c------cCCE-EEEeCCCCCc--hHHHHHHHHHhcCCC-CEEEECCCChHHHHHHHHhCC
Confidence 123233333333333221 0 1333 2221122221 333333333321 33 799999 4578999999999
Q ss_pred EEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHH
Q 001781 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566 (1013)
Q Consensus 503 IfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL 566 (1013)
++|--|.. .+.||+++|+|||+ ++.-+|.+..|.+.+++ ..|++++.+++.+++
T Consensus 284 ~vitdSSg-------gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 284 AVIGNSSS-------GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKEEIVKAIEKLL 337 (365)
T ss_pred EEEEcChh-------HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHHHHHHHHHHHh
Confidence 99866532 23899999999994 56788888888888877 468999999999954
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.6e-06 Score=100.32 Aligned_cols=287 Identities=11% Similarity=0.080 Sum_probs=184.6
Q ss_pred cEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCc
Q 001781 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364 (1013)
Q Consensus 285 DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~ 364 (1013)
|+|-.|.|+-.++........ ...++.+..|-+-..... ..-+.+.+.++ ..+-.||.|-|..+..
T Consensus 149 DiIWVhDYhL~L~P~mlR~~~---------~~~~IgfFlHiPfPssEv-fr~lP~r~eIl----~gll~~dligFqt~~y 214 (486)
T COG0380 149 DIIWVHDYHLLLVPQMLRERI---------PDAKIGFFLHIPFPSSEV-FRCLPWREEIL----EGLLGADLIGFQTESY 214 (486)
T ss_pred CEEEEEechhhhhHHHHHHhC---------CCceEEEEEeCCCCCHHH-HhhCchHHHHH----HHhhcCCeeEecCHHH
Confidence 688889999999988887666 345788887774222111 11111112222 2344677877755444
Q ss_pred hhhh------------------ccCCC--CCEEEeCCCCCCcccccccC--cc--hhHHHHHHHcCCCCCcEEEEEEccC
Q 001781 365 PMLY------------------SVLDA--GNFFVIPGSPADVWAVEAYS--KS--HEKYQLRKENGFLKDEIVVVVVGSS 420 (1013)
Q Consensus 365 ~~ly------------------~~l~~--~ki~VIPnggVDl~~~~~F~--p~--~~~~~~R~~lgi~~d~~vIL~VGRl 420 (1013)
+..+ .+... .++..+|- |+|........ +. ..-.++++.++ .++.+|+.+.|+
T Consensus 215 ~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PI-gID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgvDRl 291 (486)
T COG0380 215 ARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPI-GIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGVDRL 291 (486)
T ss_pred HHHHHHHHHHhccccccccccccccCCceEEEEEEee-ecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEehhc
Confidence 3320 00001 23344555 47772222221 11 11234444443 337799999998
Q ss_pred CCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc---cc---HHHHHHHHHHcC-------CCCCcEEE
Q 001781 421 FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD---GY---NDALQEVASRLG-------LLEHSVRH 487 (1013)
Q Consensus 421 ~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e---~Y---~e~Lkela~eLg-------L~dg~V~F 487 (1013)
.. .||...=+.||..++.++++... ++.++.|+-.... .| ...+++++.+.+ .. -|+|
T Consensus 292 Dy----~kGi~~rl~Afe~lL~~~Pe~~~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~--Pv~~ 362 (486)
T COG0380 292 DY----SKGIPQRLLAFERLLEEYPEWRG---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWT--PVHY 362 (486)
T ss_pred cc----ccCcHHHHHHHHHHHHhChhhhC---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcc--eeEE
Confidence 66 79999999999999999887655 5665544433221 11 223333333322 22 2444
Q ss_pred cC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC----CEEEcCCCCchhhhccCCeEEEEcCCCHHHHHH
Q 001781 488 YG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI----PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR 560 (1013)
Q Consensus 488 lG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~----PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAe 560 (1013)
+- ..+++..+|+.||+++.++..+ |..++..|+.+|.- |.|-|...|....+.+ .++++|.|.+++++
T Consensus 363 l~~~~~~~~l~al~~~aDv~lVtplrD--GMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d~~~va~ 437 (486)
T COG0380 363 LHRDLDRNELLALYRAADVMLVTPLRD--GMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWDTKEVAD 437 (486)
T ss_pred EeccCCHHHHHHHHhhhceeeeccccc--cccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCChHHHHH
Confidence 44 4467889999999999999998 99999999999854 7888998888777764 89999999999999
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 001781 561 AFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1013)
Q Consensus 561 AI~~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~ 604 (1013)
+|.+.|+.+. +++++.-+..++.+.++.....+..+.+-+..
T Consensus 438 ai~~AL~m~~--eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 438 AIKRALTMSL--EERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHhcCCH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 9999999987 34455555666777777777777776554443
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-05 Score=93.20 Aligned_cols=294 Identities=13% Similarity=0.149 Sum_probs=166.8
Q ss_pred EEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch--------------------------HHHHHHHHHHHHH
Q 001781 226 GLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------------SLWEQIAGQISIL 279 (1013)
Q Consensus 226 alI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~--------------------------~~~r~i~~Li~lL 279 (1013)
.++.|+.+ ..++-..+++.|++..-++.+++.+...+. .+++.+..+.+.+
T Consensus 2 ~i~AGE~S---GD~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~ 78 (373)
T PF02684_consen 2 FISAGEAS---GDLHGARLIRALKARDPDIEFYGVGGPRMQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERI 78 (373)
T ss_pred EEEeeCcc---HHHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555543 346667788999988877888776532210 1113334466777
Q ss_pred hhcCccEEEEcCcchHH--HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEE
Q 001781 280 GQEQYSLIDWSIFDGII--ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 280 k~~kpDIIh~~~~~~~l--v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~V 357 (1013)
...+||++..-.+++.- +...+.+.. .++|+||++--.-|. |. ..+ .+.+. +..|.+
T Consensus 79 ~~~~pd~vIlID~pgFNlrlak~lk~~~---------~~~~viyYI~PqvWA-Wr----~~R-~~~i~------~~~D~l 137 (373)
T PF02684_consen 79 KEEKPDVVILIDYPGFNLRLAKKLKKRG---------IPIKVIYYISPQVWA-WR----PGR-AKKIK------KYVDHL 137 (373)
T ss_pred HHcCCCEEEEeCCCCccHHHHHHHHHhC---------CCceEEEEECCceee-eC----ccH-HHHHH------HHHhhe
Confidence 78999977776655432 222222221 234488875443222 11 101 11122 235666
Q ss_pred EEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEE-EEEccCCCcCccccCHHHHHHH
Q 001781 358 VFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVV-VVVGSSFFYNELSWDYAVAMHD 436 (1013)
Q Consensus 358 I~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vI-L~VGRl~~yk~~~Kg~dlLLeA 436 (1013)
++.-+.+...|.... -++..+-++-+|. ..+.......++.+ +++++++| +..|+- ..+..+....++++
T Consensus 138 l~ifPFE~~~y~~~g-~~~~~VGHPl~d~-----~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR--~~EI~rllP~~l~a 208 (373)
T PF02684_consen 138 LVIFPFEPEFYKKHG-VPVTYVGHPLLDE-----VKPEPDRAEAREKL-LDPDKPIIALLPGSR--KSEIKRLLPIFLEA 208 (373)
T ss_pred eECCcccHHHHhccC-CCeEEECCcchhh-----hccCCCHHHHHHhc-CCCCCcEEEEeCCCC--HHHHHHHHHHHHHH
Confidence 666666666665544 3567776653443 22222345556666 77766655 455653 23444556777788
Q ss_pred HHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCcc
Q 001781 437 VGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFP 516 (1013)
Q Consensus 437 fa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFG 516 (1013)
+..+.++. |+++|++-+- +..+.+.+++.....+... .+.. ...+..++|+.||+.+..| |
T Consensus 209 a~~l~~~~-------p~l~fvvp~a--~~~~~~~i~~~~~~~~~~~-~~~~--~~~~~~~~m~~ad~al~~S-------G 269 (373)
T PF02684_consen 209 AKLLKKQR-------PDLQFVVPVA--PEVHEELIEEILAEYPPDV-SIVI--IEGESYDAMAAADAALAAS-------G 269 (373)
T ss_pred HHHHHHhC-------CCeEEEEecC--CHHHHHHHHHHHHhhCCCC-eEEE--cCCchHHHHHhCcchhhcC-------C
Confidence 77776654 7899653332 2222344566655544432 2332 2346788999999998887 6
Q ss_pred HHHHHHHHhCCCEEE-cCCCCc----------------hhhhccCC--eEEEEcCCCHHHHHHHHHHHHhCccc
Q 001781 517 SLIVRAMTFGIPVIT-PDFPII----------------KEYVAEGA--QVIFFQKDNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 517 ivVLEAMA~G~PVIA-SdvgGi----------------~EiI~dG~--~G~Lv~p~D~eeLAeAI~~LL~d~el 571 (1013)
.+.+|++.+|+|.|+ .....+ +.++.+.. .-++-+.-+++.+++++..++.|++.
T Consensus 270 TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 270 TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHH
Confidence 799999999999775 333322 11221110 11222334899999999999998875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.2e-08 Score=95.47 Aligned_cols=144 Identities=10% Similarity=0.115 Sum_probs=84.2
Q ss_pred CCCCceehHHHHHHHHHHCCCEEEEEEcCCCC----c----------------hHHHHHHHHHHHHHhhcCccEEEEcCc
Q 001781 233 AKDSRSLLLITVVKNLQKLGYVFKIYAVRSGN----S----------------HSLWEQIAGQISILGQEQYSLIDWSIF 292 (1013)
Q Consensus 233 ~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~----~----------------~~~~r~i~~Li~lLk~~kpDIIh~~~~ 292 (1013)
..||.+.++.++++.|.+.||+|.+++..... . ...+.....+.+.+++.+||+||++.+
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~ 89 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPDIVHIHGP 89 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-SEEECCTT
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCCeEEeccc
Confidence 34899999999999999999999999874322 0 011133445778888899999999887
Q ss_pred chHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHH-HHHHhccccEEEEcCCCchhhhc--
Q 001781 293 DGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSY-WKSVFSRVNVIVFPDYTLPMLYS-- 369 (1013)
Q Consensus 293 ~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~-~~~~l~~AD~VI~~S~~~~~ly~-- 369 (1013)
.......+..+ ++|+|+++|+.................+... ....++.+|.++++|...+....
T Consensus 90 ~~~~~~~~~~~------------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~~ 157 (177)
T PF13439_consen 90 PAFWIALLACR------------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIKF 157 (177)
T ss_dssp HCCCHHHHHHH------------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHHH
T ss_pred chhHHHHHhcc------------CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHHh
Confidence 66554444442 3899999999652100000000000111111 12236889999999988766633
Q ss_pred cCCCCCEEEeCCCCCCccccccc
Q 001781 370 VLDAGNFFVIPGSPADVWAVEAY 392 (1013)
Q Consensus 370 ~l~~~ki~VIPnggVDl~~~~~F 392 (1013)
++++.++.||||+ ||. +.|
T Consensus 158 ~~~~~ki~vI~ng-id~---~~F 176 (177)
T PF13439_consen 158 GIPPEKIHVIYNG-IDT---DRF 176 (177)
T ss_dssp T--SS-EEE-----B-C---CCH
T ss_pred CCcccCCEEEECC-ccH---HHc
Confidence 5677899999997 887 655
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-05 Score=90.37 Aligned_cols=299 Identities=17% Similarity=0.133 Sum_probs=167.0
Q ss_pred CCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc-----------h---------------HHHHHHHHH
Q 001781 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-----------H---------------SLWEQIAGQ 275 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~-----------~---------------~~~r~i~~L 275 (1013)
+++|+++.|+.+.| ++--.+.+.|++.==++.+++.+...+ . ..++....+
T Consensus 1 ~~ki~i~AGE~SGD---llGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~ 77 (381)
T COG0763 1 MLKIALSAGEASGD---LLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRREL 77 (381)
T ss_pred CceEEEEecccchh---hHHHHHHHHHHhhCCCeEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 36889999887554 566678888876533777777653210 0 011223335
Q ss_pred HHHHhhcCccEEEEcCcchH-H-HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhcc
Q 001781 276 ISILGQEQYSLIDWSIFDGI-I-ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSR 353 (1013)
Q Consensus 276 i~lLk~~kpDIIh~~~~~~~-l-v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~ 353 (1013)
.+.+...+||++.+-.++.. + +.....+.. .++|+|+++--+-|.-+. + +-....+.
T Consensus 78 ~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~---------p~i~iihYV~PsVWAWr~---------~---Ra~~i~~~ 136 (381)
T COG0763 78 VRYILANKPDVLILIDSPDFNLRVAKKLRKAG---------PKIKIIHYVSPSVWAWRP---------K---RAVKIAKY 136 (381)
T ss_pred HHHHHhcCCCEEEEeCCCCCchHHHHHHHHhC---------CCCCeEEEECcceeeech---------h---hHHHHHHH
Confidence 56666799997766444332 2 222222222 358888775544332111 0 11122344
Q ss_pred ccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEE-EEEEccCCCcCccccCHHH
Q 001781 354 VNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIV-VVVVGSSFFYNELSWDYAV 432 (1013)
Q Consensus 354 AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~v-IL~VGRl~~yk~~~Kg~dl 432 (1013)
.|.+++--+.++..|...... ...|-+.-.|. -.+. ..+...|++++++.+..+ .+..|+-.. +..+....
T Consensus 137 ~D~lLailPFE~~~y~k~g~~-~~yVGHpl~d~---i~~~--~~r~~ar~~l~~~~~~~~lalLPGSR~s--EI~rl~~~ 208 (381)
T COG0763 137 VDHLLAILPFEPAFYDKFGLP-CTYVGHPLADE---IPLL--PDREAAREKLGIDADEKTLALLPGSRRS--EIRRLLPP 208 (381)
T ss_pred hhHeeeecCCCHHHHHhcCCC-eEEeCChhhhh---cccc--ccHHHHHHHhCCCCCCCeEEEecCCcHH--HHHHHHHH
Confidence 677777777777676555443 56665542332 2222 345668999999887654 455575321 33344455
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCC
Q 001781 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 433 LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EE 512 (1013)
+.+|+..+..++ |+++|+ +-..+..|.....+.++...... .++..+ .+....|..||+.+..|
T Consensus 209 f~~a~~~l~~~~-------~~~~~v--lp~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~a~~~aD~al~aS---- 272 (381)
T COG0763 209 FVQAAQELKARY-------PDLKFV--LPLVNAKYRRIIEEALKWEVAGL-SLILID--GEKRKAFAAADAALAAS---- 272 (381)
T ss_pred HHHHHHHHHhhC-------CCceEE--EecCcHHHHHHHHHHhhccccCc-eEEecC--chHHHHHHHhhHHHHhc----
Confidence 555555554443 789954 33333332233333343322211 233332 36788999999998877
Q ss_pred CCccHHHHHHHHhCCCEEEc-CCCCc----------------hhhhccCC--eEEEEcCCCHHHHHHHHHHHHhCccc
Q 001781 513 QGFPSLIVRAMTFGIPVITP-DFPII----------------KEYVAEGA--QVIFFQKDNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 513 EGFGivVLEAMA~G~PVIAS-dvgGi----------------~EiI~dG~--~G~Lv~p~D~eeLAeAI~~LL~d~el 571 (1013)
|.+.+|+|.+|+|.|++ .+..+ +.++.+.. --++-..-.++.+++++..++.|+..
T Consensus 273 ---GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~ 347 (381)
T COG0763 273 ---GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDR 347 (381)
T ss_pred ---cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHh
Confidence 67999999999998764 33322 22222110 00011123589999999999999854
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.5e-05 Score=87.24 Aligned_cols=131 Identities=19% Similarity=0.116 Sum_probs=86.1
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEc
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~Fl 488 (1013)
.+.++++..|+..... ..+-...+++++..+ +.++++.+|..... . ..+++ +|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~-~~~~~~~~~~a~~~~------------~~~~i~~~g~~~~~--~--------~~~~~-~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRD-PEALARLDVEAVATL------------GQRAILSLGWGGLG--A--------EDLPD-NVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccC-HHHHHHHHHHHHHHc------------CCeEEEEccCcccc--c--------cCCCC-ceEEe
Confidence 3456778888763300 011223333333221 45656677765543 1 24565 89999
Q ss_pred CCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCC----chhhhccCCeEEEEcCC--CHHHHHHHH
Q 001781 489 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAF 562 (1013)
Q Consensus 489 G~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgG----i~EiI~dG~~G~Lv~p~--D~eeLAeAI 562 (1013)
++. +...+|..||++|.- |-..++.||+++|+|+|+....+ ..+.+.....|..+... +.+++.+++
T Consensus 294 ~~~-p~~~ll~~~d~~I~h------gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al 366 (401)
T cd03784 294 DFV-PHDWLLPRCAAVVHH------GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAAL 366 (401)
T ss_pred CCC-CHHHHhhhhheeeec------CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHH
Confidence 976 467889999999954 33478999999999999976554 34455555567766554 689999999
Q ss_pred HHHHhCcc
Q 001781 563 SLFISNGK 570 (1013)
Q Consensus 563 ~~LL~d~e 570 (1013)
.++++++.
T Consensus 367 ~~~l~~~~ 374 (401)
T cd03784 367 RRLLDPPS 374 (401)
T ss_pred HHHhCHHH
Confidence 99998543
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.3e-05 Score=88.26 Aligned_cols=134 Identities=16% Similarity=0.160 Sum_probs=86.1
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEc
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~Fl 488 (1013)
...++++.+|++.. .+.. +++.+...+.+ .++++++.+|.+... ..++ .+++ +|.+.
T Consensus 224 ~~~~v~vs~Gs~~~-----~~~~-~~~~~~~al~~--------~~~~~i~~~g~~~~~--~~~~------~~~~-~v~~~ 280 (392)
T TIGR01426 224 GRPVVLISLGTVFN-----NQPS-FYRTCVEAFRD--------LDWHVVLSVGRGVDP--ADLG------ELPP-NVEVR 280 (392)
T ss_pred CCCEEEEecCccCC-----CCHH-HHHHHHHHHhc--------CCCeEEEEECCCCCh--hHhc------cCCC-CeEEe
Confidence 34567788887533 1222 33333222221 245656677776532 2222 2455 89888
Q ss_pred CCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCC----chhhhccCCeEEEEcCC--CHHHHHHHH
Q 001781 489 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAF 562 (1013)
Q Consensus 489 G~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgG----i~EiI~dG~~G~Lv~p~--D~eeLAeAI 562 (1013)
++.+. ..+|..||++|..+-. .+++|||++|+|+|+....+ +.+.+.+...|..+... +.++++++|
T Consensus 281 ~~~p~-~~ll~~~~~~I~hgG~------~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai 353 (392)
T TIGR01426 281 QWVPQ-LEILKKADAFITHGGM------NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAV 353 (392)
T ss_pred CCCCH-HHHHhhCCEEEECCCc------hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHH
Confidence 87654 4789999999976532 47999999999999865443 33445555567766543 579999999
Q ss_pred HHHHhCcccH
Q 001781 563 SLFISNGKLS 572 (1013)
Q Consensus 563 ~~LL~d~elR 572 (1013)
.+++++++.+
T Consensus 354 ~~~l~~~~~~ 363 (392)
T TIGR01426 354 LAVLSDPRYA 363 (392)
T ss_pred HHHhcCHHHH
Confidence 9999988753
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.4e-05 Score=86.94 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=70.9
Q ss_pred cEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCC
Q 001781 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 490 (1013)
Q Consensus 411 ~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~ 490 (1013)
..+++++|...+ .+....+++++..+. .++++.+++|.+... .++++++++.. . +|++.++
T Consensus 171 ~~iLi~~GG~d~----~~~~~~~l~~l~~~~----------~~~~i~vv~G~~~~~-~~~l~~~~~~~---~-~i~~~~~ 231 (279)
T TIGR03590 171 RRVLVSFGGADP----DNLTLKLLSALAESQ----------INISITLVTGSSNPN-LDELKKFAKEY---P-NIILFID 231 (279)
T ss_pred CeEEEEeCCcCC----cCHHHHHHHHHhccc----------cCceEEEEECCCCcC-HHHHHHHHHhC---C-CEEEEeC
Confidence 457888886433 232345555554331 245556789987543 47788877642 3 7999999
Q ss_pred cccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC
Q 001781 491 NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP 535 (1013)
Q Consensus 491 ~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg 535 (1013)
.+++.++|+.||++|.+. |.++.|++++|+|+|+-...
T Consensus 232 ~~~m~~lm~~aDl~Is~~-------G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 232 VENMAELMNEADLAIGAA-------GSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred HHHHHHHHHHCCEEEECC-------chHHHHHHHcCCCEEEEEec
Confidence 999999999999999852 37899999999999986543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.9e-06 Score=97.97 Aligned_cols=181 Identities=13% Similarity=0.070 Sum_probs=114.6
Q ss_pred HHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCC
Q 001781 402 RKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLL 481 (1013)
Q Consensus 402 R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~ 481 (1013)
|..+|++++.++++.+.++ .|=....++.+.+++++. |+.+++ +....... .+.+++.+++.|+.
T Consensus 276 R~~~gLp~d~vvF~~fn~~------~KI~p~~l~~W~~IL~~v-------P~S~L~-L~~~~~~~-~~~l~~~~~~~Gv~ 340 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL------FKISPETLDLWARILKAV-------PNSRLW-LLRFPASG-EARLRRRFAAHGVD 340 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G------GG--HHHHHHHHHHHHHS-------TTEEEE-EEETSTTH-HHHHHHHHHHTTS-
T ss_pred HHHcCCCCCceEEEecCcc------ccCCHHHHHHHHHHHHhC-------CCcEEE-EeeCCHHH-HHHHHHHHHHcCCC
Confidence 6789999999999999876 456677899999998886 788844 44333322 47889999999998
Q ss_pred CCcEEEcCC--cccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchh-----hhc-cCCeEEEEcCC
Q 001781 482 EHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKE-----YVA-EGAQVIFFQKD 553 (1013)
Q Consensus 482 dg~V~FlG~--~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~E-----iI~-dG~~G~Lv~p~ 553 (1013)
..+|.|.+. .++-...|+.+||++=+..+ +-+.+.+||+.+|+|||+-.-..... ++. -|-..+++ .
T Consensus 341 ~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~---nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~ 415 (468)
T PF13844_consen 341 PDRIIFSPVAPREEHLRRYQLADICLDTFPY---NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA--D 415 (468)
T ss_dssp GGGEEEEE---HHHHHHHGGG-SEEE--SSS-----SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred hhhEEEcCCCCHHHHHHHhhhCCEEeeCCCC---CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC--C
Confidence 779999883 34455677889999977555 55899999999999999854322211 111 11122233 4
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH-H-h-hcHHHHHHHHHHHHHHH
Q 001781 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRLHA-K-N-MLALDCVTRYARILENV 605 (1013)
Q Consensus 554 D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~a-e-~-fs~e~~~~~y~~Lye~l 605 (1013)
|.+++++.-.+|.+|++.+ +++.++-++.. + . |.....++.+++.|+.+
T Consensus 416 s~~eYv~~Av~La~D~~~l---~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 416 SEEEYVEIAVRLATDPERL---RALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCHHHH---HHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 8999999999999999864 77777766633 2 2 33356666888888764
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=9e-05 Score=89.50 Aligned_cols=306 Identities=11% Similarity=0.086 Sum_probs=170.2
Q ss_pred CCCCCCCCCCCEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch-------------------HH-----
Q 001781 213 RSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------SL----- 268 (1013)
Q Consensus 213 rs~~r~g~r~~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~-------------------~~----- 268 (1013)
+...+.....++|.++.|+.+.| ++-..++++|++..-++.+.+.+...+. +.
T Consensus 217 ~~~~~~~~~~~kIfI~AGE~SGD---lhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~EVL~~l~ 293 (608)
T PRK01021 217 KEARRKPFSNTSCFISAGEHSGD---TLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEVLLALF 293 (608)
T ss_pred hhcccccccCCeEEEEeccccHH---HHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCChHHhhhhhHHHHHHHHH
Confidence 44555566788999999987553 5666789999988777877766542211 00
Q ss_pred --HHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCC--CcEEEEEcCCccccccchhhhhhHHHHH
Q 001781 269 --WEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHS--IPLVWIIQEDSLANRLPVYVERGFQNLL 344 (1013)
Q Consensus 269 --~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~--IPVI~tvHg~~l~~~l~~y~~~~l~klL 344 (1013)
.+....+.+.+++.+||++-.-.+++.-+. ++++... .+ +|+||++--.-+.-+. .+ .+.+
T Consensus 294 ~l~~~~~~l~~~i~~~kPD~vIlID~PgFNlr-LAK~lkk--------~Gi~ipviyYVsPqVWAWR~-----~R-ikki 358 (608)
T PRK01021 294 KLWYRYRKLYKTILKTNPRTVICIDFPDFHFL-LIKKLRK--------RGYKGKIVHYVCPSIWAWRP-----KR-KTIL 358 (608)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCCCHH-HHHHHHh--------cCCCCCEEEEECccceeeCc-----ch-HHHH
Confidence 123333566777799997777665543222 2221111 33 4998885544322111 01 1112
Q ss_pred HHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCc-EEEEEEccCCCc
Q 001781 345 SYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDE-IVVVVVGSSFFY 423 (1013)
Q Consensus 345 s~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~-~vIL~VGRl~~y 423 (1013)
. +..|.+++.-+.+...|... .-++..+-++-+|. ......+.+.++++|++++. .+.+.-|+- .
T Consensus 359 ~------k~vD~ll~IfPFE~~~y~~~-gv~v~yVGHPL~d~-----i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR--~ 424 (608)
T PRK01021 359 E------KYLDLLLLILPFEQNLFKDS-PLRTVYLGHPLVET-----ISSFSPNLSWKEQLHLPSDKPIVAAFPGSR--R 424 (608)
T ss_pred H------HHhhhheecCccCHHHHHhc-CCCeEEECCcHHhh-----cccCCCHHHHHHHcCCCCCCCEEEEECCCC--H
Confidence 2 23456666666666666543 33566665543443 11223455678899997554 455666753 2
Q ss_pred CccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccE
Q 001781 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI 503 (1013)
Q Consensus 424 k~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADI 503 (1013)
.+..+....+++|++. ... + ++.+|++- ..+..+.+.+++..+..++- .+.+.... +-.++|++||+
T Consensus 425 ~EI~rllPv~l~aa~~--~~l---~---~~l~fvvp--~a~~~~~~~i~~~~~~~~~~--~~~ii~~~-~~~~~m~aaD~ 491 (608)
T PRK01021 425 GDILRNLTIQVQAFLA--SSL---A---STHQLLVS--SANPKYDHLILEVLQQEGCL--HSHIVPSQ-FRYELMRECDC 491 (608)
T ss_pred HHHHHHHHHHHHHHHH--HHh---c---cCeEEEEe--cCchhhHHHHHHHHhhcCCC--CeEEecCc-chHHHHHhcCe
Confidence 2444455666666650 011 1 25776532 22222236667666543321 13333221 24789999999
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCCEEE-cCCCCc------------------hhhhccCC--eEEE--EcCCCHHHHHH
Q 001781 504 VLYGSSQVEQGFPSLIVRAMTFGIPVIT-PDFPII------------------KEYVAEGA--QVIF--FQKDNPEGLSR 560 (1013)
Q Consensus 504 fVlPS~~EEEGFGivVLEAMA~G~PVIA-SdvgGi------------------~EiI~dG~--~G~L--v~p~D~eeLAe 560 (1013)
.+..| |.+.+|++.+|+|.|+ ..++.+ +.++.+.+ --++ -+.-+++.+++
T Consensus 492 aLaaS-------GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~ 564 (608)
T PRK01021 492 ALAKC-------GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAA 564 (608)
T ss_pred eeecC-------CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHH
Confidence 99887 6799999999999876 333321 11121111 1222 13347889998
Q ss_pred HHHHHHhCccc
Q 001781 561 AFSLFISNGKL 571 (1013)
Q Consensus 561 AI~~LL~d~el 571 (1013)
++ +++.|++.
T Consensus 565 ~l-~lL~d~~~ 574 (608)
T PRK01021 565 AL-DILKTSQS 574 (608)
T ss_pred HH-HHhcCHHH
Confidence 86 77777764
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.38 E-value=7e-07 Score=87.29 Aligned_cols=134 Identities=12% Similarity=0.148 Sum_probs=74.4
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCCCCch----------------------HHHHHHHHHHHHH--hhcCccEEEEc
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH----------------------SLWEQIAGQISIL--GQEQYSLIDWS 290 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~----------------------~~~r~i~~Li~lL--k~~kpDIIh~~ 290 (1013)
||.+.++.++++.|.+.||+|.+++....... ..+..+..+..++ +..+||+||++
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~ 80 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAH 80 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEec
Confidence 57788999999999999999999987432211 0113344466777 78999999998
Q ss_pred CcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhh--h
Q 001781 291 IFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML--Y 368 (1013)
Q Consensus 291 ~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~l--y 368 (1013)
.+...++..++.+. .++|+|+++|+....... .....+.+.+ ....++.+|.+++.|...... .
T Consensus 81 ~~~~~~~~~~~~~~----------~~~p~v~~~h~~~~~~~~--~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 81 SPTAGLVAALARRR----------RGIPLVVTVHGTLFRRGS--RWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp HHHHHHHHHHHHHH----------HT--EEEE-SS-T--------HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH
T ss_pred ccchhHHHHHHHHc----------cCCcEEEEECCCchhhcc--chhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH
Confidence 86655556555533 358999999985432221 0111111112 235678899999999877655 2
Q ss_pred ccCCCCCEEEeCCC
Q 001781 369 SVLDAGNFFVIPGS 382 (1013)
Q Consensus 369 ~~l~~~ki~VIPng 382 (1013)
.+++.+++.|||||
T Consensus 147 ~g~~~~ri~vipnG 160 (160)
T PF13579_consen 147 YGVPPDRIHVIPNG 160 (160)
T ss_dssp H---GGGEEE----
T ss_pred hCCCCCcEEEeCcC
Confidence 35677899999985
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.0001 Score=82.17 Aligned_cols=269 Identities=14% Similarity=0.173 Sum_probs=145.5
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCc-----------------------h---HH--------
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNS-----------------------H---SL-------- 268 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~-----------------------~---~~-------- 268 (1013)
+||++.+...+.|- -...+.+++.| +||+|.+++.+.... . ..
T Consensus 1 MkIl~~v~~~G~GH-~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (318)
T PF13528_consen 1 MKILFYVQGHGLGH-ASRCLALARAL--RGHEVTFITSGPAPEFLKPRFPVREIPGLGPIQENGRLDRWKTVRNNIRWLA 77 (318)
T ss_pred CEEEEEeCCCCcCH-HHHHHHHHHHH--ccCceEEEEcCCcHHHhccccCEEEccCceEeccCCccchHHHHHHHHHhhH
Confidence 46777776653332 34456689999 489999987654310 0 00
Q ss_pred --HHHHHHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhh-hhhHHHHHH
Q 001781 269 --WEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYV-ERGFQNLLS 345 (1013)
Q Consensus 269 --~r~i~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~-~~~l~klLs 345 (1013)
.+.+..+.++++.++||+|.+-.+.. ...+++. .++|+|...|...........+ ...+..++.
T Consensus 78 ~~~~~~~~~~~~l~~~~pDlVIsD~~~~---~~~aa~~----------~giP~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 144 (318)
T PF13528_consen 78 RLARRIRREIRWLREFRPDLVISDFYPL---AALAARR----------AGIPVIVISNQYWFLHPNFWLPWDQDFGRLIE 144 (318)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcChHH---HHHHHHh----------cCCCEEEEEehHHcccccCCcchhhhHHHHHH
Confidence 02223356778889999887754332 2233333 4689998877753321010011 111222222
Q ss_pred HHHH-H-hccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCc
Q 001781 346 YWKS-V-FSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFY 423 (1013)
Q Consensus 346 ~~~~-~-l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~y 423 (1013)
.+.. . +..++..+..+...... ...+..+++.. + +...+.... .+.+.+++++|..
T Consensus 145 ~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~p~-~-------------~~~~~~~~~-~~~~~iLv~~gg~--- 202 (318)
T PF13528_consen 145 RYIDRYHFPPADRRLALSFYPPLP----PFFRVPFVGPI-I-------------RPEIRELPP-EDEPKILVYFGGG--- 202 (318)
T ss_pred HhhhhccCCcccceecCCcccccc----ccccccccCch-h-------------cccccccCC-CCCCEEEEEeCCC---
Confidence 2221 1 23333433333321100 01112222211 1 111111111 2356689999853
Q ss_pred CccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCc-ccHHHHHHHcc
Q 001781 424 NELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN-GDVNGVLLMAD 502 (1013)
Q Consensus 424 k~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~-eDl~~lLaaAD 502 (1013)
+...++++++.+ ++..|+ ++|..... ...+ +|++.+.. .++.++|+.||
T Consensus 203 -----~~~~~~~~l~~~-----------~~~~~~-v~g~~~~~------------~~~~-ni~~~~~~~~~~~~~m~~ad 252 (318)
T PF13528_consen 203 -----GPGDLIEALKAL-----------PDYQFI-VFGPNAAD------------PRPG-NIHVRPFSTPDFAELMAAAD 252 (318)
T ss_pred -----cHHHHHHHHHhC-----------CCCeEE-EEcCCccc------------ccCC-CEEEeecChHHHHHHHHhCC
Confidence 223455555543 456755 44766422 0133 89999976 89999999999
Q ss_pred EEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchh------hhccCCeEEEEcC--CCHHHHHHHHHHH
Q 001781 503 IVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKE------YVAEGAQVIFFQK--DNPEGLSRAFSLF 565 (1013)
Q Consensus 503 IfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~E------iI~dG~~G~Lv~p--~D~eeLAeAI~~L 565 (1013)
++|..+-+. ++.||+++|+|+|.-...+..| .++.-..|..++. -+++.+.++|.++
T Consensus 253 ~vIs~~G~~------t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 253 LVISKGGYT------TISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEEECCCHH------HHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 999876443 6999999999999987755433 3444445655543 3578888877653
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00031 Score=80.57 Aligned_cols=310 Identities=15% Similarity=0.110 Sum_probs=182.5
Q ss_pred CCEEEEEecccCCCCceehHHHHHHHHHHCC-CEEEEEEcC-CC--CchHHH---------------------------H
Q 001781 222 PPRIGLILGNMAKDSRSLLLITVVKNLQKLG-YVFKIYAVR-SG--NSHSLW---------------------------E 270 (1013)
Q Consensus 222 ~~RIalI~g~l~~gg~~l~vl~Lak~L~e~G-yeV~Vlt~~-~g--~~~~~~---------------------------r 270 (1013)
+.||+.|+|.- +.-.-+..+.+++++.+ .+..++..+ +. .+...+ .
T Consensus 3 ~~Kv~~I~GTR---PE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~~~t~~ 79 (383)
T COG0381 3 MLKVLTIFGTR---PEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLGEITGN 79 (383)
T ss_pred ceEEEEEEecC---HHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHHHHHHH
Confidence 46788888753 33344556788888776 666666332 11 111100 2
Q ss_pred HHHHHHHHHhhcCccEEEEcCcch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHH
Q 001781 271 QIAGQISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKS 349 (1013)
Q Consensus 271 ~i~~Li~lLk~~kpDIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~ 349 (1013)
.+..+.+++.+.+||+|..|.-.. .+.+++++.. .++||...--| +...-.++|. ..-.+...
T Consensus 80 ~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~----------~~IpV~HvEAG--lRt~~~~~PE----E~NR~l~~ 143 (383)
T COG0381 80 IIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFY----------LKIPVGHVEAG--LRTGDLYFPE----EINRRLTS 143 (383)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHH----------hCCceEEEecc--cccCCCCCcH----HHHHHHHH
Confidence 334467888899999777765433 3444566544 35887754222 1111111222 21222222
Q ss_pred HhccccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHH-cCCCCCcEEEEEEccCCCcCcc
Q 001781 350 VFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKE-NGFLKDEIVVVVVGSSFFYNEL 426 (1013)
Q Consensus 350 ~l~~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~-lgi~~d~~vIL~VGRl~~yk~~ 426 (1013)
.+ +++.++++...+.. ..+.++++++++-|.-+|....... ........... +....++.+++..-|... .
T Consensus 144 ~~--S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~-~~~~~~~~~~~~~~~~~~~~iLvT~HRreN---~ 217 (383)
T COG0381 144 HL--SDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRD-RVLEDSKILAKGLDDKDKKYILVTAHRREN---V 217 (383)
T ss_pred Hh--hhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHh-hhccchhhHHhhhccccCcEEEEEcchhhc---c
Confidence 33 56667777655443 4578888899998865554211110 01111222222 444445566666655422 2
Q ss_pred ccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHH-HHcCCCCCcEEEcCCc--ccHHHHHHHccE
Q 001781 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA-SRLGLLEHSVRHYGFN--GDVNGVLLMADI 503 (1013)
Q Consensus 427 ~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela-~eLgL~dg~V~FlG~~--eDl~~lLaaADI 503 (1013)
.+++..+++++..+..++ +++. ++.-..+. ..+++.. +.|+-.+ +|+++.+. .+...++..|-+
T Consensus 218 ~~~~~~i~~al~~i~~~~-------~~~~--viyp~H~~---~~v~e~~~~~L~~~~-~v~li~pl~~~~f~~L~~~a~~ 284 (383)
T COG0381 218 GEPLEEICEALREIAEEY-------PDVI--VIYPVHPR---PRVRELVLKRLKNVE-RVKLIDPLGYLDFHNLMKNAFL 284 (383)
T ss_pred cccHHHHHHHHHHHHHhC-------CCce--EEEeCCCC---hhhhHHHHHHhCCCC-cEEEeCCcchHHHHHHHHhceE
Confidence 277888888888887775 4666 24444443 4455555 5555554 68888855 466778888865
Q ss_pred EEEccCCCCCCccHHHHHHHHhCCCEEEcC-CCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001781 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASA 581 (1013)
Q Consensus 504 fVlPS~~EEEGFGivVLEAMA~G~PVIASd-vgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~a 581 (1013)
.+-=| |...=||-.+|+||++-. ...-+|.+..| +-.++. .+.+.+.+++..++++++. +++|+..
T Consensus 285 iltDS-------GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~i~~~~~~ll~~~~~---~~~m~~~ 351 (383)
T COG0381 285 ILTDS-------GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEENILDAATELLEDEEF---YERMSNA 351 (383)
T ss_pred EEecC-------CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHHHHHHHHHHhhChHH---HHHHhcc
Confidence 54433 445779999999999865 45567877654 445554 5789999999999999875 4677665
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0007 Score=76.48 Aligned_cols=83 Identities=18% Similarity=0.107 Sum_probs=63.0
Q ss_pred CCCCcEEEcCCc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchh------hhccCCeEEEEcC
Q 001781 480 LLEHSVRHYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKE------YVAEGAQVIFFQK 552 (1013)
Q Consensus 480 L~dg~V~FlG~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~E------iI~dG~~G~Lv~p 552 (1013)
+.+ +|.+.+.. +++..+|..||++|.-+-. .++.||+++|+|+|.....+..| .+.+...|..++.
T Consensus 227 ~~~-~v~~~~~~~~~~~~~l~~ad~vI~~~G~------~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~ 299 (321)
T TIGR00661 227 YNE-NVEIRRITTDNFKELIKNAELVITHGGF------SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299 (321)
T ss_pred cCC-CEEEEECChHHHHHHHHhCCEEEECCCh------HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence 344 88888866 5899999999999988644 36999999999999988765433 4555567888877
Q ss_pred CCHHHHHHHHHHHHhCcc
Q 001781 553 DNPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 553 ~D~eeLAeAI~~LL~d~e 570 (1013)
.+. ++.+++...++++.
T Consensus 300 ~~~-~~~~~~~~~~~~~~ 316 (321)
T TIGR00661 300 KEL-RLLEAILDIRNMKR 316 (321)
T ss_pred hhH-HHHHHHHhcccccc
Confidence 777 66667776666654
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00011 Score=71.78 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=77.6
Q ss_pred EEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCchHH-----------------H--HHHHHHHHHHhhcCc
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSL-----------------W--EQIAGQISILGQEQY 284 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~-----------------~--r~i~~Li~lLk~~kp 284 (1013)
+|+++.... ..+..++++.|.+.||+|++++......... . -.+..+.+++++.+|
T Consensus 1 KIl~i~~~~-----~~~~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~~k~~~~~~~~~~l~k~ik~~~~ 75 (139)
T PF13477_consen 1 KILLIGNTP-----STFIYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSPRKSPLNYIKYFRLRKIIKKEKP 75 (139)
T ss_pred CEEEEecCc-----HHHHHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCCCCccHHHHHHHHHHHHhccCCC
Confidence 355555433 4578899999999999999999855421100 1 113357888999999
Q ss_pred cEEEEcCcch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcC
Q 001781 285 SLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPD 361 (1013)
Q Consensus 285 DIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S 361 (1013)
|+||+|.... .+++.++++.. ..+|+|++.|+........ ...+.+.+.+ ..++++|.+++.+
T Consensus 76 DvIh~h~~~~~~~~~~l~~~~~---------~~~~~i~~~hg~~~~~~~~---~~~~~~~~~~--~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 76 DVIHCHTPSPYGLFAMLAKKLL---------KNKKVIYTVHGSDFYNSSK---KKKLKKFIIK--FAFKRADKIIVQS 139 (139)
T ss_pred CEEEEecCChHHHHHHHHHHHc---------CCCCEEEEecCCeeecCCc---hHHHHHHHHH--HHHHhCCEEEEcC
Confidence 9999998776 56666666543 3489999999965422211 1112233333 3577899998764
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0002 Score=82.25 Aligned_cols=259 Identities=16% Similarity=0.080 Sum_probs=132.2
Q ss_pred HHHHHHHHHHhhcCccEEEEcCcch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHH
Q 001781 270 EQIAGQISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWK 348 (1013)
Q Consensus 270 r~i~~Li~lLk~~kpDIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~ 348 (1013)
..+..+...+.+.+||+|..+.-.. .+.+.+++.. .++|++ ++|+..-..... .+ ..........
T Consensus 54 ~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~----------~~ipv~-HieaGlRs~d~~-~g--~~de~~R~~i 119 (346)
T PF02350_consen 54 LAIIELADVLEREKPDAVLVLGDRNEALAAALAAFY----------LNIPVA-HIEAGLRSGDRT-EG--MPDEINRHAI 119 (346)
T ss_dssp HHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHH----------TT-EEE-EES-----S-TT-SS--TTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHH----------hCCCEE-EecCCCCccccC-CC--Cchhhhhhhh
Confidence 3444577888899999887765443 3444555543 469965 456641111110 00 0122222222
Q ss_pred HHhccccEEEEcCCCchhh--hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHc-CCCCCcEEEEEEccCCCcCc
Q 001781 349 SVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKEN-GFLKDEIVVVVVGSSFFYNE 425 (1013)
Q Consensus 349 ~~l~~AD~VI~~S~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~l-gi~~d~~vIL~VGRl~~yk~ 425 (1013)
..+ |+..++++...... ..+.++.+++++-+..+|.... ..+..........+ +..+++.+++..-|......
T Consensus 120 ~~l--a~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~--~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~ 195 (346)
T PF02350_consen 120 DKL--AHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQ--NKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDN 195 (346)
T ss_dssp HHH---SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHH--HHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTH
T ss_pred hhh--hhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHH--hHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCC
Confidence 334 77888877655443 4567788999997765555211 10010000001111 11445555555544322000
Q ss_pred cccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC--CcccHHHHHHHccE
Q 001781 426 LSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADI 503 (1013)
Q Consensus 426 ~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG--~~eDl~~lLaaADI 503 (1013)
......+.+++..+.+. +++.+++...+.+. ....+.+..+++ + +|++.. ...+...+++.|++
T Consensus 196 -~~~~~~i~~~l~~L~~~--------~~~~vi~~~hn~p~-~~~~i~~~l~~~---~-~v~~~~~l~~~~~l~ll~~a~~ 261 (346)
T PF02350_consen 196 -PERLEQILEALKALAER--------QNVPVIFPLHNNPR-GSDIIIEKLKKY---D-NVRLIEPLGYEEYLSLLKNADL 261 (346)
T ss_dssp -H--HHHHHHHHHHHHHH--------TTEEEEEE--S-HH-HHHHHHHHHTT----T-TEEEE----HHHHHHHHHHESE
T ss_pred -hHHHHHHHHHHHHHHhc--------CCCcEEEEecCCch-HHHHHHHHhccc---C-CEEEECCCCHHHHHHHHhcceE
Confidence 12234555555555443 36775544443332 245565555533 3 788888 44688899999999
Q ss_pred EEEccCCCCCCccHHHH-HHHHhCCCEEEc-CCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001781 504 VLYGSSQVEQGFPSLIV-RAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 504 fVlPS~~EEEGFGivVL-EAMA~G~PVIAS-dvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~e 570 (1013)
+|--|. .+. ||.++|+|||.- +.|.-.+.+..+.+-+ +. .|.+++.++|.+++++.+
T Consensus 262 vvgdSs--------GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~~~I~~ai~~~l~~~~ 320 (346)
T PF02350_consen 262 VVGDSS--------GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDPEAIIQAIEKALSDKD 320 (346)
T ss_dssp EEESSH--------HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSHHHHHHHHHHHHH-HH
T ss_pred EEEcCc--------cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCHHHHHHHHHHHHhChH
Confidence 976653 355 999999999987 4677778877765555 65 799999999999998743
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0048 Score=70.70 Aligned_cols=264 Identities=14% Similarity=0.133 Sum_probs=144.5
Q ss_pred eehHHHHHHHHHHCCCEEEEEEcCCCCchHHH-------------------------HHHHHHHHHHhhcCccEEEEcCc
Q 001781 238 SLLLITVVKNLQKLGYVFKIYAVRSGNSHSLW-------------------------EQIAGQISILGQEQYSLIDWSIF 292 (1013)
Q Consensus 238 ~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~-------------------------r~i~~Li~lLk~~kpDIIh~~~~ 292 (1013)
-.+.-.+.+.|++.||+|.+.+-..+....+. .....+.+++++++||++-+...
T Consensus 13 vhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s 92 (335)
T PF04007_consen 13 VHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYKLLKLIKKFKPDVAISFGS 92 (335)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEecCc
Confidence 34455689999999999999876544322221 22233777888899998876443
Q ss_pred ch-HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccC
Q 001781 293 DG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVL 371 (1013)
Q Consensus 293 ~~-~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l 371 (1013)
.. ..++. . .++|.|....... .... -+..+.-|+.++++...-...+..+
T Consensus 93 ~~a~~va~----~----------lgiP~I~f~D~e~-a~~~--------------~~Lt~Pla~~i~~P~~~~~~~~~~~ 143 (335)
T PF04007_consen 93 PEAARVAF----G----------LGIPSIVFNDTEH-AIAQ--------------NRLTLPLADVIITPEAIPKEFLKRF 143 (335)
T ss_pred HHHHHHHH----H----------hCCCeEEEecCch-hhcc--------------ceeehhcCCeeECCcccCHHHHHhc
Confidence 22 21222 2 3488887755421 1000 0112345888888875433332233
Q ss_pred CCC-CEEEeCCCCCCccc-ccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCc-cccCH-HHHHHHHHHHHHHHhhc
Q 001781 372 DAG-NFFVIPGSPADVWA-VEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNE-LSWDY-AVAMHDVGPLLIKYARR 447 (1013)
Q Consensus 372 ~~~-ki~VIPnggVDl~~-~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~-~~Kg~-dlLLeAfa~Ll~~~~~l 447 (1013)
..+ ++... ++ ++... ...|.| ...+.+++|+.++..+++ |...++. .-++. ..+-+.+..+.+.
T Consensus 144 G~~~~i~~y-~G-~~E~ayl~~F~P---d~~vl~~lg~~~~~yIvv---R~~~~~A~y~~~~~~i~~~ii~~L~~~---- 211 (335)
T PF04007_consen 144 GAKNQIRTY-NG-YKELAYLHPFKP---DPEVLKELGLDDEPYIVV---RPEAWKASYDNGKKSILPEIIEELEKY---- 211 (335)
T ss_pred CCcCCEEEE-CC-eeeEEeecCCCC---ChhHHHHcCCCCCCEEEE---EeccccCeeecCccchHHHHHHHHHhh----
Confidence 333 34333 33 33211 123444 456778899876654443 4333111 01122 2223333333221
Q ss_pred ccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCC
Q 001781 448 NSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGI 527 (1013)
Q Consensus 448 k~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~ 527 (1013)
.+. +|++....+. +++.++. .+......-+..+++.-||++|-.+ |.-..||..+|+
T Consensus 212 ----~~~--vV~ipr~~~~-----~~~~~~~-----~~~i~~~~vd~~~Ll~~a~l~Ig~g-------gTMa~EAA~LGt 268 (335)
T PF04007_consen 212 ----GRN--VVIIPRYEDQ-----RELFEKY-----GVIIPPEPVDGLDLLYYADLVIGGG-------GTMAREAALLGT 268 (335)
T ss_pred ----Cce--EEEecCCcch-----hhHHhcc-----CccccCCCCCHHHHHHhcCEEEeCC-------cHHHHHHHHhCC
Confidence 122 2344443321 2233322 2444444446668999999997654 567899999999
Q ss_pred CEEEcCCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHh
Q 001781 528 PVITPDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFIS 567 (1013)
Q Consensus 528 PVIASdvg---Gi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~ 567 (1013)
|+|.+-.| +.-+++. +.|++....|++++.+.+.+...
T Consensus 269 PaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 269 PAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 99986543 3334444 35889988999999987766554
|
They are found in archaea and some bacteria and have no known function. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0044 Score=69.54 Aligned_cols=166 Identities=16% Similarity=0.232 Sum_probs=113.2
Q ss_pred EEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcC--CCcccHHHHHHHHHHcCCCCCcEEEcC
Q 001781 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN--STDGYNDALQEVASRLGLLEHSVRHYG 489 (1013)
Q Consensus 412 ~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~--G~e~Y~e~Lkela~eLgL~dg~V~FlG 489 (1013)
.+.+.||... ++ ..+|..+|+++.+.. +.++++++-.|- |+..|.+++++.++++--.+ ++..+-
T Consensus 146 ~~tIlvGNSg--d~-SN~Hie~L~~l~~~~---------~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~-~~~~L~ 212 (322)
T PRK02797 146 KMTILVGNSG--DR-SNRHIEALRALHQQF---------GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAE-NFQILT 212 (322)
T ss_pred ceEEEEeCCC--CC-cccHHHHHHHHHHHh---------CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcc-cEEehh
Confidence 4556666532 22 467877777776552 247886555665 77889999999999887645 777776
Q ss_pred ---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEc-CCCCchhhhccCCeEEEEcCCCH--HHHHHHHH
Q 001781 490 ---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNP--EGLSRAFS 563 (1013)
Q Consensus 490 ---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIAS-dvgGi~EiI~dG~~G~Lv~p~D~--eeLAeAI~ 563 (1013)
+-+|..++++.||+.++.-..- ||+|. ++-.+.+|+||+.+ +++-+.++.+.+.. ++++.++. ..+.+
T Consensus 213 e~l~f~eYl~lL~~~Dl~~f~~~RQ-QgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L~~~~v~e--- 286 (322)
T PRK02797 213 EKLPFDDYLALLRQCDLGYFIFARQ-QGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDLDEDIVRE--- 286 (322)
T ss_pred hhCCHHHHHHHHHhCCEEEEeechh-hHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcccHHHHHH---
Confidence 4478889999999999876543 37776 56689999999887 56777777766533 33443332 11111
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHhc
Q 001781 564 LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 564 ~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~lL~ 607 (1013)
..++|+...++.+. |+.++.++.+.++++....
T Consensus 287 ----------~~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 287 ----------AQRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred ----------HHHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 12455556556444 9999999999999987643
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.015 Score=67.12 Aligned_cols=235 Identities=13% Similarity=0.075 Sum_probs=116.9
Q ss_pred CEEEEEecccCCCCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------------HHHHHHH-------HHHHHHh
Q 001781 223 PRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH---------------SLWEQIA-------GQISILG 280 (1013)
Q Consensus 223 ~RIalI~g~l~~gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~---------------~~~r~i~-------~Li~lLk 280 (1013)
++|.++.|+.+.| ++-..++++|++ ++.+++.+..... .....+. .+.+.+
T Consensus 2 ~~i~i~aGE~SGD---~~ga~l~~~l~~---~~~~~G~GG~~m~~~~~~~~~lsv~G~~evl~~~~~~~~~~~~~~~~~- 74 (347)
T PRK14089 2 MKILVSALEPSAN---LHLKELLKNLPK---DYELIGIFDKSLGNPLYDSREFSIMGFVDVLPKLFFAKKAIKEMVELA- 74 (347)
T ss_pred cEEEEEeccccHH---HHHHHHHHHHhc---CCEEEEEechHHHHhcCChHHhhhhhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 4678888776443 555677888877 5555554432210 1111121 222332
Q ss_pred hcCccEEEEcCcchHH--HHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEE
Q 001781 281 QEQYSLIDWSIFDGII--ADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIV 358 (1013)
Q Consensus 281 ~~kpDIIh~~~~~~~l--v~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI 358 (1013)
.+||++..-.+++.- +...+.+.. .++|+||++--.-|.-+. .+ .+.+.+ .+|.++
T Consensus 75 -~~pd~~i~iD~p~Fnl~lak~~k~~~---------~~i~viyyi~PqvWAWr~-----~R-~~~i~k------~~d~vl 132 (347)
T PRK14089 75 -KQADKVLLMDSSSFNIPLAKKIKKAY---------PKKEIIYYILPQVWAWKK-----GR-AKILEK------YCDFLA 132 (347)
T ss_pred -cCCCEEEEeCCCCCCHHHHHHHHhcC---------CCCCEEEEECccceeeCc-----ch-HHHHHH------HHhhhh
Confidence 699977665555432 222222211 268999886544332111 11 122222 244444
Q ss_pred EcCCCchhhhccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHH
Q 001781 359 FPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVG 438 (1013)
Q Consensus 359 ~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa 438 (1013)
+.-+.+...| + .+..++.+.-.|. ..+ .+.. ++++..+.++-|+... +..+....+++++.
T Consensus 133 ~ifPFE~~~y-g---~~~~~VGhPl~d~-----~~~------~~~~--~~~~~~I~llPGSR~~--Ei~~llP~~~~aa~ 193 (347)
T PRK14089 133 SILPFEVQFY-Q---SKATYVGHPLLDE-----IKE------FKKD--LDKEGTIAFMPGSRKS--EIKRLMPIFKELAK 193 (347)
T ss_pred ccCCCCHHHh-C---CCCEEECCcHHHh-----hhh------hhhh--cCCCCEEEEECCCCHH--HHHHHHHHHHHHHH
Confidence 4334444444 2 2445665531221 111 0111 2334445555564311 22233344445554
Q ss_pred HHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHH
Q 001781 439 PLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSL 518 (1013)
Q Consensus 439 ~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGiv 518 (1013)
++.++ ...| ++.+.... +.+++..++. . .+.+.+ +..++|+.||+.+..| |.+
T Consensus 194 ~L~~~---------~~~~-~i~~a~~~---~~i~~~~~~~--~--~~~~~~---~~~~~m~~aDlal~~S-------GT~ 246 (347)
T PRK14089 194 KLEGK---------EKIL-VVPSFFKG---KDLKEIYGDI--S--EFEISY---DTHKALLEAEFAFICS-------GTA 246 (347)
T ss_pred HHhhc---------CcEE-EEeCCCcH---HHHHHHHhcC--C--CcEEec---cHHHHHHhhhHHHhcC-------cHH
Confidence 44321 2453 45555431 5566655432 2 344553 5678999999998887 456
Q ss_pred HHHHHHhCCCEEEc
Q 001781 519 IVRAMTFGIPVITP 532 (1013)
Q Consensus 519 VLEAMA~G~PVIAS 532 (1013)
.+|++.+|+|.|..
T Consensus 247 TLE~al~g~P~Vv~ 260 (347)
T PRK14089 247 TLEAALIGTPFVLA 260 (347)
T ss_pred HHHHHHhCCCEEEE
Confidence 77999999998863
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.086 Score=60.21 Aligned_cols=163 Identities=14% Similarity=0.160 Sum_probs=103.6
Q ss_pred EEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCC--CcccHHHHHHHHHHcCCCCCcEEEcC
Q 001781 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS--TDGYNDALQEVASRLGLLEHSVRHYG 489 (1013)
Q Consensus 412 ~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G--~e~Y~e~Lkela~eLgL~dg~V~FlG 489 (1013)
.+-+.||.... + .-+|..+++++.+. . +.++++++-.|-| ++.|.+.+++.++++--.+ ++..+-
T Consensus 185 ~ltILvGNSgd--~-sNnHieaL~~L~~~---~------~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~-~~~iL~ 251 (360)
T PF07429_consen 185 KLTILVGNSGD--P-SNNHIEALEALKQQ---F------GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAE-NFQILT 251 (360)
T ss_pred ceEEEEcCCCC--C-CccHHHHHHHHHHh---c------CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCcc-ceeEhh
Confidence 35555664322 2 46787777666543 2 2467755455554 4668888999888875444 677665
Q ss_pred ---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC-CCchhhhccCCeEEEEc--CCCHHHHHHHHH
Q 001781 490 ---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF-PIIKEYVAEGAQVIFFQ--KDNPEGLSRAFS 563 (1013)
Q Consensus 490 ---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv-gGi~EiI~dG~~G~Lv~--p~D~eeLAeAI~ 563 (1013)
+-+|..++++.||++++....- +|.|. ++-.+.+|+||+.+.. +-+..+.+.+ --+++. .-|...+.++=.
T Consensus 252 e~mpf~eYl~lL~~cDl~if~~~RQ-QgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~-ipVlf~~d~L~~~~v~ea~r 328 (360)
T PF07429_consen 252 EFMPFDEYLALLSRCDLGIFNHNRQ-QGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQG-IPVLFYGDELDEALVREAQR 328 (360)
T ss_pred hhCCHHHHHHHHHhCCEEEEeechh-hhHhH-HHHHHHcCCeEEEecCChHHHHHHhCC-CeEEeccccCCHHHHHHHHH
Confidence 4578889999999999997654 37776 6678999999998864 4455555443 233443 234555555555
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 001781 564 LFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1013)
Q Consensus 564 ~LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~ 604 (1013)
++..-+.. + ..||..+..+.+.+.+..
T Consensus 329 ql~~~dk~-----~---------iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 329 QLANVDKQ-----Q---------IAFFAPNYLQGWRQALRL 355 (360)
T ss_pred HHhhCccc-----c---------eeeeCCchHHHHHHHHHH
Confidence 55443321 1 237777777777776653
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.033 Score=61.73 Aligned_cols=278 Identities=13% Similarity=0.148 Sum_probs=141.4
Q ss_pred EEEEEecccCC-C-CceehHHHHHHHHHHCCCEEEEEEcCCCC--chHHHHHHHH----HHHHHhhcCccEEEEcCcch-
Q 001781 224 RIGLILGNMAK-D-SRSLLLITVVKNLQKLGYVFKIYAVRSGN--SHSLWEQIAG----QISILGQEQYSLIDWSIFDG- 294 (1013)
Q Consensus 224 RIalI~g~l~~-g-g~~l~vl~Lak~L~e~GyeV~Vlt~~~g~--~~~~~r~i~~----Li~lLk~~kpDIIh~~~~~~- 294 (1013)
+|+++.....- | |--...+.+++.|++.|..+..++-.+.. .+..|..+.. ....|+..++|++.+-.|..
T Consensus 2 ~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~~~f~~~~~~~~n~ik~~k~d~lI~Dsygl~ 81 (318)
T COG3980 2 KVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVYEGFKVLEGRGNNLIKEEKFDLLIFDSYGLN 81 (318)
T ss_pred cEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhhhhccceeeecccccccccCCEEEEeccCCC
Confidence 45555443222 2 22355778999999999888888766521 2223332222 23467788999776644433
Q ss_pred -HHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCC
Q 001781 295 -IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDA 373 (1013)
Q Consensus 295 -~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~ 373 (1013)
.....+... ...|+|+. .+. ..+.. ...|.++-.... ...+.+.-+
T Consensus 82 ~dd~k~ik~e-----------~~~k~l~f-Dd~-~~~~~-------------------~d~d~ivN~~~~-a~~~y~~v~ 128 (318)
T COG3980 82 ADDFKLIKEE-----------AGSKILIF-DDE-NAKSF-------------------KDNDLIVNAILN-ANDYYGLVP 128 (318)
T ss_pred HHHHHHHHHH-----------hCCcEEEe-cCC-Cccch-------------------hhhHhhhhhhhc-chhhccccC
Confidence 333333311 23555553 221 11111 011111111111 111222233
Q ss_pred CCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCC
Q 001781 374 GNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGS 453 (1013)
Q Consensus 374 ~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpd 453 (1013)
.+..+..+...-+. .+.| ...|+..-..+.+-+++..|.-.+ |+ +.++.++.|.+.. -+
T Consensus 129 ~k~~~~lGp~y~~l-r~eF------~~~r~~~~~r~~r~ilI~lGGsDp-----k~--lt~kvl~~L~~~~-------~n 187 (318)
T COG3980 129 NKTRYYLGPGYAPL-RPEF------YALREENTERPKRDILITLGGSDP-----KN--LTLKVLAELEQKN-------VN 187 (318)
T ss_pred cceEEEecCCceec-cHHH------HHhHHHHhhcchheEEEEccCCCh-----hh--hHHHHHHHhhccC-------ee
Confidence 34433333200000 0122 122222222223336666664322 33 4455555553321 24
Q ss_pred eEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCE--E-
Q 001781 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPV--I- 530 (1013)
Q Consensus 454 ikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PV--I- 530 (1013)
++ +++|..... ...+++.+++ .+ ++.++-..+++..+|..||+.+... |.++.||+..|+|. |
T Consensus 188 l~--iV~gs~~p~-l~~l~k~~~~---~~-~i~~~~~~~dma~LMke~d~aI~Aa-------GstlyEa~~lgvP~l~l~ 253 (318)
T COG3980 188 LH--IVVGSSNPT-LKNLRKRAEK---YP-NINLYIDTNDMAELMKEADLAISAA-------GSTLYEALLLGVPSLVLP 253 (318)
T ss_pred EE--EEecCCCcc-hhHHHHHHhh---CC-CeeeEecchhHHHHHHhcchheecc-------chHHHHHHHhcCCceEEe
Confidence 55 577865543 4666666664 33 7888888899999999999997653 67899999999993 3
Q ss_pred -EcCCCCchhhhcc-C---CeEEEEcCCCHHHHHHHHHHHHhCcccH
Q 001781 531 -TPDFPIIKEYVAE-G---AQVIFFQKDNPEGLSRAFSLFISNGKLS 572 (1013)
Q Consensus 531 -ASdvgGi~EiI~d-G---~~G~Lv~p~D~eeLAeAI~~LL~d~elR 572 (1013)
+.+.-........ | ..|+- .........+.++.+|+..|
T Consensus 254 ~a~NQ~~~a~~f~~lg~~~~l~~~---l~~~~~~~~~~~i~~d~~~r 297 (318)
T COG3980 254 LAENQIATAKEFEALGIIKQLGYH---LKDLAKDYEILQIQKDYARR 297 (318)
T ss_pred eeccHHHHHHHHHhcCchhhccCC---CchHHHHHHHHHhhhCHHHh
Confidence 3332222222221 1 22332 24566777788888888764
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.007 Score=63.74 Aligned_cols=149 Identities=9% Similarity=-0.022 Sum_probs=88.6
Q ss_pred EEEEEecccCC---CCceehHHHHHHHHHHCCCEEEEEEcCCCCch--HHH----------------HH----HHHHHHH
Q 001781 224 RIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--SLW----------------EQ----IAGQISI 278 (1013)
Q Consensus 224 RIalI~g~l~~---gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~--~~~----------------r~----i~~Li~l 278 (1013)
+|++|..---| ||.+.++-+|+..|.+.|++|+|+|..+.... ..+ +. +..+...
T Consensus 3 kIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~a 82 (185)
T PF09314_consen 3 KIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHA 82 (185)
T ss_pred eEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHH
Confidence 45555443222 89999999999999999999999987543200 001 11 1113333
Q ss_pred H---hh--cCccEEEEcCcc-hHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhc
Q 001781 279 L---GQ--EQYSLIDWSIFD-GIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFS 352 (1013)
Q Consensus 279 L---k~--~kpDIIh~~~~~-~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~ 352 (1013)
+ +. .+.|+++.+.+. +.++..+..+... .+.|++..+|+..+...--......+.++.++ .+.+
T Consensus 83 l~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~--------~g~~v~vN~DGlEWkR~KW~~~~k~~lk~~E~--~avk 152 (185)
T PF09314_consen 83 LRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRK--------KGGKVVVNMDGLEWKRAKWGRPAKKYLKFSEK--LAVK 152 (185)
T ss_pred HHHHhhccccCCEEEEEcCCccHHHHHHHHhhhh--------cCCcEEECCCcchhhhhhcCHHHHHHHHHHHH--HHHH
Confidence 3 22 357799998887 4554444443321 35689999888665432111112222222222 2456
Q ss_pred cccEEEEcCCCchhhhccC-CCCCEEEeCCC
Q 001781 353 RVNVIVFPDYTLPMLYSVL-DAGNFFVIPGS 382 (1013)
Q Consensus 353 ~AD~VI~~S~~~~~ly~~l-~~~ki~VIPng 382 (1013)
.+|.+|+.+......+..- ...+..+||+|
T Consensus 153 ~ad~lIaDs~~I~~y~~~~y~~~~s~~IaYG 183 (185)
T PF09314_consen 153 YADRLIADSKGIQDYIKERYGRKKSTFIAYG 183 (185)
T ss_pred hCCEEEEcCHHHHHHHHHHcCCCCcEEecCC
Confidence 7999999998877664332 33778899886
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.041 Score=63.13 Aligned_cols=319 Identities=11% Similarity=0.130 Sum_probs=170.6
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCCCCc--------hHHH-----HHHHH--HHHHHhhcCccEEEEcCcc----hH
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRSGNS--------HSLW-----EQIAG--QISILGQEQYSLIDWSIFD----GI 295 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~--------~~~~-----r~i~~--Li~lLk~~kpDIIh~~~~~----~~ 295 (1013)
+|.--+.--+.+.|...||++..+-..+... .... ..... ....++.+++|+|-..... ..
T Consensus 14 ~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k~rd~~~~~~~~~~~~~~~~e~~~~~~i~~fk~d~iv~~~~~~~~~~~ 93 (373)
T COG4641 14 NGSAEYYRGLLRALKMDGMKVLFLESGDFWDYKNRDIDAEDGCTEAFYKDQPELESLLYIREFKPDIIVNMSGDDQPDEE 93 (373)
T ss_pred CCchhhHHHHHHHHHhccceEEEEecccHHhhhcccccCccchhheeecCcHHHHHHHHHHhcCCcEEEEecccccccce
Confidence 3433445557888999999999985533110 0000 00011 2455677999977663332 11
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCc-hh-hhccCCC
Q 001781 296 IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL-PM-LYSVLDA 373 (1013)
Q Consensus 296 lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~-~~-ly~~l~~ 373 (1013)
....+.+... ...+|+++..-+.+..... + .......+. ...+..-|.|++-.... .. .|.....
T Consensus 94 ~~~~~~a~l~--------~~~l~~~~w~te~p~~~~~--~-~~~~~~~~~--~~~l~~fd~v~~~g~~l~~~~yyq~~~~ 160 (373)
T COG4641 94 STIDLWAWLK--------RKCLPVIVWYTEDPYDTDI--F-SQVAEEQLA--RRPLFIFDNVLSFGGGLVANKYYQEGGA 160 (373)
T ss_pred ehHHHHHHhh--------cCCcceEEEEeccchhhhh--h-hhhhHHHhh--ccccchhhhhhhccchHHHHHHHHhhcc
Confidence 1111111111 1457855544444322111 0 001111111 01111223344433333 22 2435556
Q ss_pred CCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCC
Q 001781 374 GNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGS 453 (1013)
Q Consensus 374 ~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpd 453 (1013)
.+...++.. +|. ..|.+-++.... ..-+.++|...+ + ..+.+..+.-.-+.... .+
T Consensus 161 ~~~~~~~~a-~d~---~~~~~i~~da~~---------~~dL~~ign~~p------D---r~e~~ke~~~~ps~kl~--v~ 216 (373)
T COG4641 161 RNCYYLPWA-VDD---SLFHPIPPDASY---------DVDLNLIGNPYP------D---RVEEIKEFFVEPSFKLM--VD 216 (373)
T ss_pred cceeccCcc-CCc---hhcccCCccccc---------eeeeEEecCCCc------c---HHHHHHHHhhccchhhh--cc
Confidence 677778775 666 677554322221 225788886422 2 23333333222100000 01
Q ss_pred eEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC---CcccHHHHHHHccEEEEccCC--CCCCc--cHHHHHHHHhC
Q 001781 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG---FNGDVNGVLLMADIVLYGSSQ--VEQGF--PSLIVRAMTFG 526 (1013)
Q Consensus 454 ikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG---~~eDl~~lLaaADIfVlPS~~--EEEGF--GivVLEAMA~G 526 (1013)
-+| ...|.. |...+.... -.+ ++...| ....+..++..-|+.+.-++. ++-++ .+-+.|+|+||
T Consensus 217 rr~-~~~g~~---y~~~~~~~~----~~~-~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~ 287 (373)
T COG4641 217 RRF-YVLGPR---YPDDIWGRT----WEP-NVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG 287 (373)
T ss_pred cee-eecCCc---cchhhhccc----ccc-hhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC
Confidence 232 234443 222222111 112 455555 336788899999998864432 11133 78899999999
Q ss_pred CCEEEcCCCCchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH-hhcHHHHHHHHHHHHHH
Q 001781 527 IPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK-NMLALDCVTRYARILEN 604 (1013)
Q Consensus 527 ~PVIASdvgGi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae-~fs~e~~~~~y~~Lye~ 604 (1013)
.|.|+....++...+.+|+.-++. .|.+++.+++..++..++.| ++|++.|.+.+. .+..+.-+..++.....
T Consensus 288 ~~liT~~~~~~e~~f~pgk~~iv~--~d~kdl~~~~~yll~h~~er---keiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 288 GFLITDYWKDLEKFFKPGKDIIVY--QDSKDLKEKLKYLLNHPDER---KEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred CccccccHHHHHHhcCCchheEEe--cCHHHHHHHHHHHhcCcchH---HHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 999999999999999988665554 59999999999999999764 999999999544 45555556566665555
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.24 Score=55.86 Aligned_cols=273 Identities=14% Similarity=0.116 Sum_probs=148.5
Q ss_pred CceehHHHHHHHHHHCCCEEEEEEcCCCCchHHH--------------------------HHHHHHHHHHhhcCccEEEE
Q 001781 236 SRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLW--------------------------EQIAGQISILGQEQYSLIDW 289 (1013)
Q Consensus 236 g~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~~~--------------------------r~i~~Li~lLk~~kpDIIh~ 289 (1013)
+.--+.-.+...|++.||+|.+.+-..+....+. +....+.+++.+++||+...
T Consensus 11 ~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kpdv~i~ 90 (346)
T COG1817 11 PHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKPDVAIG 90 (346)
T ss_pred chhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCCceEee
Confidence 3445566788999999999999776554333222 11222677888889997655
Q ss_pred cCcchHHHHHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhh--
Q 001781 290 SIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPML-- 367 (1013)
Q Consensus 290 ~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~l-- 367 (1013)
-+ ...+.+.+. . .++|.|+...... . .... +..+.-|+.++.+.......
T Consensus 91 ~~--s~~l~rvaf-g----------Lg~psIi~~D~eh-A------------~~qn--kl~~Pla~~ii~P~~~~~~~~~ 142 (346)
T COG1817 91 KH--SPELPRVAF-G----------LGIPSIIFVDNEH-A------------EAQN--KLTLPLADVIITPEAIDEEELL 142 (346)
T ss_pred cC--CcchhhHHh-h----------cCCceEEecCChh-H------------HHHh--hcchhhhhheecccccchHHHH
Confidence 11 122222221 1 3467776533320 0 0001 12344477888876544322
Q ss_pred hccCCCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEEEE-Ecc-CCCcCccccCHHHHHHHHHHHHHHHh
Q 001781 368 YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVV-VGS-SFFYNELSWDYAVAMHDVGPLLIKYA 445 (1013)
Q Consensus 368 y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~-VGR-l~~yk~~~Kg~dlLLeAfa~Ll~~~~ 445 (1013)
..+-++.++...++. ........|.|. .++-+++|+.++...|++ .-. -..|....++...+.+.+..+.+.
T Consensus 143 ~~G~~p~~i~~~~gi-ae~~~v~~f~pd---~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~-- 216 (346)
T COG1817 143 DFGADPNKISGYNGI-AELANVYGFVPD---PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY-- 216 (346)
T ss_pred HhCCCccceecccce-eEEeecccCCCC---HHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC--
Confidence 233333344333222 222112335553 456678999886444332 111 112334445655566666555321
Q ss_pred hcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHh
Q 001781 446 RRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTF 525 (1013)
Q Consensus 446 ~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~ 525 (1013)
- .|++-.. ...++..+ +.. +++.....-|--+++--|++++-.+ |.-.-||...
T Consensus 217 ---------g-iV~ipr~-----~~~~eife--~~~--n~i~pk~~vD~l~Llyya~lvig~g-------gTMarEaAlL 270 (346)
T COG1817 217 ---------G-IVLIPRE-----KEQAEIFE--GYR--NIIIPKKAVDTLSLLYYATLVIGAG-------GTMAREAALL 270 (346)
T ss_pred ---------c-EEEecCc-----hhHHHHHh--hhc--cccCCcccccHHHHHhhhheeecCC-------chHHHHHHHh
Confidence 1 2233332 33444455 332 3444444445556777788775443 4557899999
Q ss_pred CCCEEEcCCC---CchhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001781 526 GIPVITPDFP---IIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 526 G~PVIASdvg---Gi~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~e 570 (1013)
|+|.|...-| +.-++.. +.|.++...|+.+..+...+++.++.
T Consensus 271 GtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 271 GTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred CCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHhhchh
Confidence 9999998733 3444444 36889988888888887777777664
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.11 Score=59.40 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=89.6
Q ss_pred CCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEE
Q 001781 408 LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRH 487 (1013)
Q Consensus 408 ~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~F 487 (1013)
++...+++.+|. +.-|.+++..+++.. ...+..+ . +.+++.|+.-.. +..+++.....-.+ +|+.
T Consensus 217 pE~~~Ilvs~GG------G~dG~eLi~~~l~A~-~~l~~l~----~-~~~ivtGP~MP~--~~r~~l~~~A~~~p-~i~I 281 (400)
T COG4671 217 PEGFDILVSVGG------GADGAELIETALAAA-QLLAGLN----H-KWLIVTGPFMPE--AQRQKLLASAPKRP-HISI 281 (400)
T ss_pred CccceEEEecCC------ChhhHHHHHHHHHHh-hhCCCCC----c-ceEEEeCCCCCH--HHHHHHHHhcccCC-CeEE
Confidence 445668888883 345655544444332 2222211 1 136788885543 55555555444344 7999
Q ss_pred cCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCch-hhh-c------cCCeEEEEcC-CCHHHH
Q 001781 488 YGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK-EYV-A------EGAQVIFFQK-DNPEGL 558 (1013)
Q Consensus 488 lG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~-EiI-~------dG~~G~Lv~p-~D~eeL 558 (1013)
.-+..++..+++.|++.|.-+-+. +++|-+++|||.+.-.....+ |.. . -|-...+.+. -+++.|
T Consensus 282 ~~f~~~~~~ll~gA~~vVSm~GYN------TvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~L 355 (400)
T COG4671 282 FEFRNDFESLLAGARLVVSMGGYN------TVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNL 355 (400)
T ss_pred EEhhhhHHHHHHhhheeeecccch------hhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHH
Confidence 999999999999999999877665 899999999998775543332 321 1 1222333332 258889
Q ss_pred HHHHHHHHhCc
Q 001781 559 SRAFSLFISNG 569 (1013)
Q Consensus 559 AeAI~~LL~d~ 569 (1013)
+++|..+++.|
T Consensus 356 a~al~~~l~~P 366 (400)
T COG4671 356 ADALKAALARP 366 (400)
T ss_pred HHHHHhcccCC
Confidence 99999998855
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.00011 Score=74.85 Aligned_cols=106 Identities=21% Similarity=0.349 Sum_probs=66.5
Q ss_pred eEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC
Q 001781 454 FKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1013)
Q Consensus 454 ikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd 533 (1013)
+++++++|.... +....... +... +|.+.++.+++..+|+.||++|.- +-+.++.|++++|+|.|.-.
T Consensus 32 ~~viv~~G~~~~---~~~~~~~~--~~~~-~v~~~~~~~~m~~~m~~aDlvIs~------aG~~Ti~E~l~~g~P~I~ip 99 (167)
T PF04101_consen 32 IQVIVQTGKNNY---EELKIKVE--NFNP-NVKVFGFVDNMAELMAAADLVISH------AGAGTIAEALALGKPAIVIP 99 (167)
T ss_dssp CCCCCCCTTCEC---HHHCCCHC--CTTC-CCEEECSSSSHHHHHHHHSEEEEC------S-CHHHHHHHHCT--EEEE-
T ss_pred cEEEEEECCCcH---HHHHHHHh--ccCC-cEEEEechhhHHHHHHHcCEEEeC------CCccHHHHHHHcCCCeeccC
Confidence 444567777632 23322233 2223 799999999999999999988765 33568999999999988766
Q ss_pred CCC--------chhhhccCCeEEEEcC--CCHHHHHHHHHHHHhCccc
Q 001781 534 FPI--------IKEYVAEGAQVIFFQK--DNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 534 vgG--------i~EiI~dG~~G~Lv~p--~D~eeLAeAI~~LL~d~el 571 (1013)
... ....+.....|..+.. .+++.+.++|.++++++..
T Consensus 100 ~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 100 LPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp -TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-
T ss_pred CCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHH
Confidence 555 2223333333333322 2468899999999988865
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.021 Score=68.40 Aligned_cols=195 Identities=12% Similarity=0.094 Sum_probs=123.4
Q ss_pred HHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCC
Q 001781 401 LRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL 480 (1013)
Q Consensus 401 ~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL 480 (1013)
.|..++++++.+++..+..+.+.+ ...++.+..+++.. |+-.+.++.=+--. .+.++..++++|+
T Consensus 749 ~r~~y~Lp~d~vvf~~FNqLyKid------P~~l~~W~~ILk~V-------PnS~LwllrfPa~g--e~rf~ty~~~~Gl 813 (966)
T KOG4626|consen 749 TRSQYGLPEDAVVFCNFNQLYKID------PSTLQMWANILKRV-------PNSVLWLLRFPAVG--EQRFRTYAEQLGL 813 (966)
T ss_pred CCCCCCCCCCeEEEeechhhhcCC------HHHHHHHHHHHHhC-------CcceeEEEeccccc--hHHHHHHHHHhCC
Confidence 466789999999998888774433 44788888888776 45552222222111 2778999999999
Q ss_pred CCCcEEEcC--CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchh-----hhccCCeEEEEcCC
Q 001781 481 LEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKE-----YVAEGAQVIFFQKD 553 (1013)
Q Consensus 481 ~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~E-----iI~dG~~G~Lv~p~ 553 (1013)
+..+|+|.. ..+|=..-.+.|||.+=+.... | -.+-+|.+.+|+|+|+-....... .+..-..|-++- .
T Consensus 814 ~p~riifs~va~k~eHvrr~~LaDv~LDTplcn--G-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia-k 889 (966)
T KOG4626|consen 814 EPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCN--G-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA-K 889 (966)
T ss_pred CccceeeccccchHHHHHhhhhhhhcccCcCcC--C-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-h
Confidence 988999998 3356667788899998665553 2 234568899999999743221111 111111222332 5
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HH-Hh-hcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 001781 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRL-HA-KN-MLALDCVTRYARILENVLNFPSDALLPGP 617 (1013)
Q Consensus 554 D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe-~a-e~-fs~e~~~~~y~~Lye~lL~~pse~~~P~~ 617 (1013)
+.+++.+.-.++-.|.+. ++++...-+. ++ .. |.....+..++++|.+..+.-.....|.-
T Consensus 890 ~~eEY~~iaV~Latd~~~---L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y~~G~~p~h 953 (966)
T KOG4626|consen 890 NREEYVQIAVRLATDKEY---LKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKYCSGEVPDH 953 (966)
T ss_pred hHHHHHHHHHHhhcCHHH---HHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHhccCCCCch
Confidence 789999888888887764 3555544444 11 22 33356666788888777665545555544
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.022 Score=65.46 Aligned_cols=224 Identities=13% Similarity=0.124 Sum_probs=104.7
Q ss_pred CCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhc---cCCCCCEEEeCCCCCCcccccc
Q 001781 315 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYS---VLDAGNFFVIPGSPADVWAVEA 391 (1013)
Q Consensus 315 ~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~---~l~~~ki~VIPnggVDl~~~~~ 391 (1013)
.+.++|.+-||.++.......... ..............|++++++......+. +.+.+++.+...+-. +.
T Consensus 98 ~~~~~i~lwHG~~~K~~g~~~~~~--~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~-----D~ 170 (369)
T PF04464_consen 98 KNQKYIQLWHGIPLKKIGYDSPDN--KNYRKNYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRN-----DY 170 (369)
T ss_dssp TTSEEEE--SS--SB--GGG-S-----TS-HHHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGG-----HH
T ss_pred CCcEEEEecCCCcccccchhcccc--ccchhhhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeE-----hH
Confidence 457899999998654422111010 00011233456678999998877655532 344555555422111 22
Q ss_pred c-Cc-chhHHHHHHHcCCCCCcEEEEEEccCCCcCcc--ccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCccc
Q 001781 392 Y-SK-SHEKYQLRKENGFLKDEIVVVVVGSSFFYNEL--SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY 467 (1013)
Q Consensus 392 F-~p-~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~--~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y 467 (1013)
+ .. ......+++.++++.++.+|+++=........ .+.....++ +..+.... . +++. + ++-..+.
T Consensus 171 l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~-~~~l~~~~----~--~~~~-l-i~k~Hp~-- 239 (369)
T PF04464_consen 171 LFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLD-FEKLNFLL----K--NNYV-L-IIKPHPN-- 239 (369)
T ss_dssp HHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT--HHHHHHHH----T--TTEE-E-EE--SHH--
T ss_pred HhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccccccccccC-HHHHHHHh----C--CCcE-E-EEEeCch--
Confidence 2 22 22256778889999999899999554221110 011111111 22222111 1 4676 3 3443331
Q ss_pred HHHHHHHHHH-cCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEE--cCCC-------Cc
Q 001781 468 NDALQEVASR-LGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVIT--PDFP-------II 537 (1013)
Q Consensus 468 ~e~Lkela~e-LgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIA--Sdvg-------Gi 537 (1013)
++..... ....+ +|.+.....++.++|..||++|. -++-++.|++.+++|||- .|.. ..
T Consensus 240 ---~~~~~~~~~~~~~-~i~~~~~~~~~~~ll~~aDiLIT-------DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~ 308 (369)
T PF04464_consen 240 ---MKKKFKDFKEDNS-NIIFVSDNEDIYDLLAAADILIT-------DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFY 308 (369)
T ss_dssp ---HHTT----TT-TT-TEEE-TT-S-HHHHHHT-SEEEE-------SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBS
T ss_pred ---hhhchhhhhccCC-cEEECCCCCCHHHHHHhcCEEEE-------echhHHHHHHHhCCCEEEEeccHHHHhhccCCC
Confidence 2222221 33444 89888877799999999999864 234589999999999994 3442 12
Q ss_pred hhhhccCCeEEEEcCCCHHHHHHHHHHHHhCcc
Q 001781 538 KEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 538 ~EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d~e 570 (1013)
.+ ..+...|-.+ .+.++|.++|..+++++.
T Consensus 309 ~~-~~~~~pg~~~--~~~~eL~~~i~~~~~~~~ 338 (369)
T PF04464_consen 309 FD-YEEDLPGPIV--YNFEELIEAIENIIENPD 338 (369)
T ss_dssp S--TTTSSSS-EE--SSHHHHHHHHTTHHHHHH
T ss_pred Cc-hHhhCCCcee--CCHHHHHHHHHhhhhCCH
Confidence 22 2222345555 489999999999987664
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=2.5 Score=50.36 Aligned_cols=228 Identities=10% Similarity=0.021 Sum_probs=113.4
Q ss_pred CCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhh--ccCCCCCEEEeCCCCCCccccccc
Q 001781 315 HSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLY--SVLDAGNFFVIPGSPADVWAVEAY 392 (1013)
Q Consensus 315 ~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly--~~l~~~ki~VIPnggVDl~~~~~F 392 (1013)
.++|++..-++....... +.+.+ .+..+++++.|.+-+..-.... .+++..++.+.+.. +=. +
T Consensus 147 ~gkpv~l~gqsiGPf~~~-------~~r~l--~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDp-AF~-----L 211 (426)
T PRK10017 147 AKKPLYMIGHSVGPFQDE-------QFNQL--ANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDT-AWL-----V 211 (426)
T ss_pred cCCCEEEECCcCCCcCCH-------HHHHH--HHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecCh-hhh-----C
Confidence 457888876664322111 11212 2345788999888654443332 24555567766543 111 1
Q ss_pred Ccch-h---HHHHHHHcCCCCCcEEEEEEcc-CCCcCcc-ccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcC----
Q 001781 393 SKSH-E---KYQLRKENGFLKDEIVVVVVGS-SFFYNEL-SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN---- 462 (1013)
Q Consensus 393 ~p~~-~---~~~~R~~lgi~~d~~vIL~VGR-l~~yk~~-~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~---- 462 (1013)
++.. . ...+...++....+.+|++.-| ..++++. ........+.++.+.+.+.+ ++-++.|+-.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~---~g~~Vv~lp~~~~~~~~ 288 (426)
T PRK10017 212 DHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIID---EGYQVIALSTCTGIDSY 288 (426)
T ss_pred CccccccccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHH---CCCeEEEEecccCccCC
Confidence 1110 0 1111112222222334444323 2111110 00223344555555554421 2335554433211
Q ss_pred CCcccHHHHHHHHHHcCCCCCcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----C
Q 001781 463 STDGYNDALQEVASRLGLLEHSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----P 535 (1013)
Q Consensus 463 G~e~Y~e~Lkela~eLgL~dg~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----g 535 (1013)
+.+ .....+++.+.+.-++ +++.+. ...++..+++.||++|-.-.+ +++=|+++|+|+|+-.. -
T Consensus 289 ~~d-D~~~~~~l~~~~~~~~-~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-------a~I~a~~~gvP~i~i~Y~~K~~ 359 (426)
T PRK10017 289 NKD-DRMVALNLRQHVSDPA-RYHVVMDELNDLEMGKILGACELTVGTRLH-------SAIISMNFGTPAIAINYEHKSA 359 (426)
T ss_pred CCc-hHHHHHHHHHhccccc-ceeEecCCCChHHHHHHHhhCCEEEEecch-------HHHHHHHcCCCEEEeeehHHHH
Confidence 111 1234456666655443 444432 234677999999998766444 68899999999998543 2
Q ss_pred CchhhhccCCeEEEEc--CCCHHHHHHHHHHHHhCccc
Q 001781 536 IIKEYVAEGAQVIFFQ--KDNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 536 Gi~EiI~dG~~G~Lv~--p~D~eeLAeAI~~LL~d~el 571 (1013)
+..+.+. ...++++ .-+.+++.+.+.+++++.+.
T Consensus 360 ~~~~~lg--~~~~~~~~~~l~~~~Li~~v~~~~~~r~~ 395 (426)
T PRK10017 360 GIMQQLG--LPEMAIDIRHLLDGSLQAMVADTLGQLPA 395 (426)
T ss_pred HHHHHcC--CccEEechhhCCHHHHHHHHHHHHhCHHH
Confidence 3333332 2233343 33578899999999998763
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.29 Score=55.76 Aligned_cols=243 Identities=16% Similarity=0.107 Sum_probs=128.3
Q ss_pred eehHHHHHHHHHH-CCCEEEEEEcCCCC--c----hHHHHHH-HHHHHHHhhcCccEEEEcCcchHHHHHHHHHHhhhhc
Q 001781 238 SLLLITVVKNLQK-LGYVFKIYAVRSGN--S----HSLWEQI-AGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSL 309 (1013)
Q Consensus 238 ~l~vl~Lak~L~e-~GyeV~Vlt~~~g~--~----~~~~r~i-~~Li~lLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l 309 (1013)
..+.+-++++|.. .++++..+...... . ...+..+ ......+....||+|....-....+....++...
T Consensus 4 ~~Q~~GLa~aL~~~~~~~~~~v~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~pdLiIsaGr~t~~~~~~l~r~~g--- 80 (311)
T PF06258_consen 4 ENQSLGLAEALGRLTPYEIKRVDVRRPWRWLPRLLPAPLRALLKPFSPALEPPWPDLIISAGRRTAPAALALRRASG--- 80 (311)
T ss_pred HHHHHHHHHHhcCccCcceeEeccccchhhccccccchHHHhhhcccccccCCCCcEEEECCCchHHHHHHHHHHcC---
Confidence 3455667888765 47888777654410 0 0001111 1122333446789998877777666666665442
Q ss_pred ccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCCCCcccc
Q 001781 310 MQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAV 389 (1013)
Q Consensus 310 ~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPnggVDl~~~ 389 (1013)
.+.++|+..+-. .. ....|.||++.++.. -...++..+.+. .+....
T Consensus 81 -----g~~~~V~i~~P~-~~---------------------~~~FDlvi~p~HD~~-----~~~~Nvl~t~ga-~~~i~~ 127 (311)
T PF06258_consen 81 -----GRTKTVQIMDPR-LP---------------------PRPFDLVIVPEHDRL-----PRGPNVLPTLGA-PNRITP 127 (311)
T ss_pred -----CCceEEEEcCCC-CC---------------------ccccCEEEECcccCc-----CCCCceEecccC-CCcCCH
Confidence 234666653221 10 234688888877621 123455555443 222111
Q ss_pred cccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHH---HHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcc
Q 001781 390 EAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA---VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG 466 (1013)
Q Consensus 390 ~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~d---lLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~ 466 (1013)
+.. ......+..++.-.+...+.+.||.-.. ...-+.+ .+++.+..+.+.. ... +.|...--..
T Consensus 128 ~~l--~~a~~~~~~~~~~l~~p~~avLIGG~s~--~~~~~~~~~~~l~~~l~~~~~~~--------~~~-~~vttSRRTp 194 (311)
T PF06258_consen 128 ERL--AEAAAAWAPRLAALPRPRVAVLIGGDSK--HYRWDEEDAERLLDQLAALAAAY--------GGS-LLVTTSRRTP 194 (311)
T ss_pred HHH--HHHHHhhhhhhccCCCCeEEEEECcCCC--CcccCHHHHHHHHHHHHHHHHhC--------CCe-EEEEcCCCCc
Confidence 111 1123344455655556667778874322 1123333 3444444443332 356 3355542221
Q ss_pred cHHHHHHHHHHcCCCCCcE-EEcCCc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCC
Q 001781 467 YNDALQEVASRLGLLEHSV-RHYGFN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI 536 (1013)
Q Consensus 467 Y~e~Lkela~eLgL~dg~V-~FlG~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgG 536 (1013)
.+....+.+.++-.+ .+ .|-+.. .-+..+|+.||.++.+.-.- + -+.||++.|+||.+-...+
T Consensus 195 -~~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~La~ad~i~VT~DSv----S-MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 195 -PEAEAALRELLKDNP-GVYIWDGTGENPYLGFLAAADAIVVTEDSV----S-MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred -HHHHHHHHHhhcCCC-ceEEecCCCCCcHHHHHHhCCEEEEcCccH----H-HHHHHHHcCCCEEEecCCC
Confidence 133333444443333 56 443433 33779999999999986542 3 4789999999999987766
|
The function of this family is unknown. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.089 Score=61.97 Aligned_cols=86 Identities=17% Similarity=0.133 Sum_probs=67.8
Q ss_pred CCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----CchhhhccCCeEEEEc--C
Q 001781 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQ--K 552 (1013)
Q Consensus 479 gL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~EiI~dG~~G~Lv~--p 552 (1013)
++++ ++...+... ...++..||++|+..-. .++.||+.+|+|+|+-..+ ...+.+++-..|...+ .
T Consensus 281 ~~p~-n~~v~~~~p-~~~~l~~ad~vI~hGG~------gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~ 352 (406)
T COG1819 281 NVPD-NVIVADYVP-QLELLPRADAVIHHGGA------GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEE 352 (406)
T ss_pred cCCC-ceEEecCCC-HHHHhhhcCEEEecCCc------chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCccc
Confidence 5676 788877653 34599999999998644 3799999999999986544 3556677777888777 5
Q ss_pred CCHHHHHHHHHHHHhCcccH
Q 001781 553 DNPEGLSRAFSLFISNGKLS 572 (1013)
Q Consensus 553 ~D~eeLAeAI~~LL~d~elR 572 (1013)
.+++.++++|.++++++..+
T Consensus 353 l~~~~l~~av~~vL~~~~~~ 372 (406)
T COG1819 353 LTEERLRAAVNEVLADDSYR 372 (406)
T ss_pred CCHHHHHHHHHHHhcCHHHH
Confidence 78999999999999988763
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.02 Score=66.16 Aligned_cols=103 Identities=13% Similarity=0.167 Sum_probs=69.8
Q ss_pred cHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCc----hhhhccC-CeEEEE-c------CCCHHHHHH
Q 001781 493 DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPII----KEYVAEG-AQVIFF-Q------KDNPEGLSR 560 (1013)
Q Consensus 493 Dl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi----~EiI~dG-~~G~Lv-~------p~D~eeLAe 560 (1013)
|..++.+.|.+.|+||++| ++|.+..|.-.||+|-|+++..|. .|.|++. ..|+.+ + .++.++|++
T Consensus 493 DYeeFVRGCHLGVFPSYYE--PWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~ 570 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYE--PWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLAS 570 (692)
T ss_pred CHHHHhccccccccccccC--CCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHH
Confidence 5678999999999999999 999999999999999999998875 4555553 346544 2 235677777
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHH-HHHh-hcHHHHHHHHHHH
Q 001781 561 AFSLFISNGKLSKFARTVASAGRL-HAKN-MLALDCVTRYARI 601 (1013)
Q Consensus 561 AI~~LL~d~elR~~~~~Mg~aARe-~ae~-fs~e~~~~~y~~L 601 (1013)
-|..+..... ++++-++.|. .... ..|+..-..|.+.
T Consensus 571 ~m~~F~~qsR----RQRIiqRNrtErLSdLLDWk~lG~~Y~~a 609 (692)
T KOG3742|consen 571 FMYEFCKQSR----RQRIIQRNRTERLSDLLDWKYLGRYYRKA 609 (692)
T ss_pred HHHHHHHHHH----HHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence 7777765433 3555554443 3333 3344444344443
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.2 Score=60.70 Aligned_cols=85 Identities=15% Similarity=-0.021 Sum_probs=60.8
Q ss_pred CCCCCcEEEcCCcccHHHHHH--HccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCC----chhhhccCCeEEEEcC
Q 001781 479 GLLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQK 552 (1013)
Q Consensus 479 gL~dg~V~FlG~~eDl~~lLa--aADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgG----i~EiI~dG~~G~Lv~p 552 (1013)
++++ +|...+... -..+|+ .+++||.- |-..++.||+.+|+|+|+-...+ ....+...+.|..++.
T Consensus 343 ~~p~-Nv~i~~w~P-q~~lL~hp~v~~fItH------GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~ 414 (507)
T PHA03392 343 NLPA-NVLTQKWFP-QRAVLKHKNVKAFVTQ------GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT 414 (507)
T ss_pred cCCC-ceEEecCCC-HHHHhcCCCCCEEEec------CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence 4565 888888543 256774 47888764 33458999999999999866433 3444555567777765
Q ss_pred C--CHHHHHHHHHHHHhCccc
Q 001781 553 D--NPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 553 ~--D~eeLAeAI~~LL~d~el 571 (1013)
. +.+++.++|.++++|+..
T Consensus 415 ~~~t~~~l~~ai~~vl~~~~y 435 (507)
T PHA03392 415 VTVSAAQLVLAIVDVIENPKY 435 (507)
T ss_pred CCcCHHHHHHHHHHHhCCHHH
Confidence 3 679999999999998765
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.13 Score=61.95 Aligned_cols=168 Identities=10% Similarity=0.106 Sum_probs=92.4
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc------ccHHHHHHHHHHcCCCC
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD------GYNDALQEVASRLGLLE 482 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e------~Y~e~Lkela~eLgL~d 482 (1013)
++.++++.+|+..... .+....+++++... +..||..++.... ...+.+.+.+. +.
T Consensus 284 ~~svvyvsfGS~~~~~--~~~~~~~~~~l~~~------------~~~flw~~~~~~~~~~~~~~lp~~~~~r~~----~~ 345 (482)
T PLN03007 284 PDSVIYLSFGSVASFK--NEQLFEIAAGLEGS------------GQNFIWVVRKNENQGEKEEWLPEGFEERTK----GK 345 (482)
T ss_pred CCceEEEeecCCcCCC--HHHHHHHHHHHHHC------------CCCEEEEEecCCcccchhhcCCHHHHHHhc----cC
Confidence 4567888889864311 12222333332221 4466767775311 01122222222 33
Q ss_pred CcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----Cchhhhcc-CCeEEEE-------
Q 001781 483 HSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAE-GAQVIFF------- 550 (1013)
Q Consensus 483 g~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~EiI~d-G~~G~Lv------- 550 (1013)
+|+..+...+ ..+|..+++.++-++- | -++++||+++|+|+|+-..- .....+.+ -+.|+-+
T Consensus 346 -g~~v~~w~PQ-~~iL~h~~v~~fvtH~---G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 419 (482)
T PLN03007 346 -GLIIRGWAPQ-VLILDHQATGGFVTHC---G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK 419 (482)
T ss_pred -CEEEecCCCH-HHHhccCccceeeecC---c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc
Confidence 6777664422 5688888875555553 2 45899999999999986532 33333321 1233332
Q ss_pred ---cCCCHHHHHHHHHHHHhCc---ccHHHHHHHHHHHHHHHHh-hcHHHHHHHHHH
Q 001781 551 ---QKDNPEGLSRAFSLFISNG---KLSKFARTVASAGRLHAKN-MLALDCVTRYAR 600 (1013)
Q Consensus 551 ---~p~D~eeLAeAI~~LL~d~---elR~~~~~Mg~aARe~ae~-fs~e~~~~~y~~ 600 (1013)
..-+.++++++|.+++.++ +.|+..+++++.+++.+.+ =++.+.++.+.+
T Consensus 420 ~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~ 476 (482)
T PLN03007 420 VKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFME 476 (482)
T ss_pred cccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 1137899999999999887 4555556666666664333 334444444443
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.02 Score=62.79 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=79.3
Q ss_pred EEEEEecccCC----CCceehHHHHHHHHHHCCCEEEEEEcCCCCch---------------------------------
Q 001781 224 RIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH--------------------------------- 266 (1013)
Q Consensus 224 RIalI~g~l~~----gg~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~--------------------------------- 266 (1013)
||++|..++.+ ||-..++-.|.++|+++|++|.++....+...
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~~~ 80 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGVWYEVRVYRY 80 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE----EEEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEeccccccccccccceEEEEEEE
Confidence 68888888877 88899999999999999999999865221000
Q ss_pred -------------HH-----------------HHH---H-HHHHHHHhh--cCccEEEEcCcchHHHHHHHHHHhhhhcc
Q 001781 267 -------------SL-----------------WEQ---I-AGQISILGQ--EQYSLIDWSIFDGIIADSLEAKEAISSLM 310 (1013)
Q Consensus 267 -------------~~-----------------~r~---i-~~Li~lLk~--~kpDIIh~~~~~~~lv~~Laak~~~s~l~ 310 (1013)
.. ... + .....+++. .+|||||+|.++..++..+.+... .
T Consensus 81 ~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~----~ 156 (245)
T PF08323_consen 81 PVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERY----Q 156 (245)
T ss_dssp EETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCC----S
T ss_pred EcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhcccc----c
Confidence 00 000 1 113455554 589999999999988877765321 1
Q ss_pred cCC-CCCCcEEEEEcCCccccccchh--hhhhH-------------HHHHHHHHHHhccccEEEEcCCCchhh
Q 001781 311 QEP-FHSIPLVWIIQEDSLANRLPVY--VERGF-------------QNLLSYWKSVFSRVNVIVFPDYTLPML 367 (1013)
Q Consensus 311 qep-~~~IPVI~tvHg~~l~~~l~~y--~~~~l-------------~klLs~~~~~l~~AD~VI~~S~~~~~l 367 (1013)
..+ +.++|+|+|+|+.......... ...++ ...+...+..+..||.|+++|+..+..
T Consensus 157 ~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 157 QDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYARE 229 (245)
T ss_dssp S------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHH
T ss_pred cccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHH
Confidence 111 3469999999994322111000 00000 011122334567799999999876544
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.088 Score=62.88 Aligned_cols=97 Identities=10% Similarity=0.056 Sum_probs=66.6
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC----CCCchhhhcc-CCeEEEEcC-----C
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD----FPIIKEYVAE-GAQVIFFQK-----D 553 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd----vgGi~EiI~d-G~~G~Lv~p-----~ 553 (1013)
++...+... -..+|+.+++..+-++-. -++++||+++|+|+|+-. .......+.+ -+.|+.++. -
T Consensus 335 g~~v~~W~P-Q~~iL~H~~v~~FvTH~G----~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 335 GMVVKSWAP-QVPVLNHKAVGGFVTHCG----WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFV 409 (451)
T ss_pred cEEEEeeCC-HHHHhCCCccceEeccCc----chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCcc
Confidence 565555322 245899999966666542 468999999999999854 4445555543 357777752 2
Q ss_pred CHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Q 001781 554 NPEGLSRAFSLFISNGKLSKFARTVASAGRLH 585 (1013)
Q Consensus 554 D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ 585 (1013)
+.++++++|.+++.+++.|+...++.+.+++.
T Consensus 410 ~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~A 441 (451)
T PLN03004 410 SSTEVEKRVQEIIGECPVRERTMAMKNAAELA 441 (451)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 78999999999998877655555566665554
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.1 Score=62.21 Aligned_cols=93 Identities=5% Similarity=-0.038 Sum_probs=62.4
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhcc-CCeEEEEcCCCHHHH
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAE-GAQVIFFQKDNPEGL 558 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~d-G~~G~Lv~p~D~eeL 558 (1013)
++...+.. .-..+|+..++.++-++- --.+++||+.+|+|+|+-.. ......+.+ -..|+-+..-+.+++
T Consensus 329 ~~~v~~w~-PQ~~iL~h~~v~~fvtH~----G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 329 QGKVVSWA-PQLEVLKHQAVGCYLTHC----GWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred CEEEEecC-CHHHHhCCCccceEEecC----cchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 56665532 235678888876665553 24689999999999998543 344555544 256666655688999
Q ss_pred HHHHHHHHhCcccHHHHHHHHHH
Q 001781 559 SRAFSLFISNGKLSKFARTVASA 581 (1013)
Q Consensus 559 AeAI~~LL~d~elR~~~~~Mg~a 581 (1013)
+++|.+++.+++.|+..+++++.
T Consensus 404 ~~~v~~~l~~~~~r~~a~~l~~~ 426 (448)
T PLN02562 404 EEGLRKVMEDSGMGERLMKLRER 426 (448)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999887664334444443
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.098 Score=62.81 Aligned_cols=102 Identities=10% Similarity=0.065 Sum_probs=67.5
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhccCCeEEEEcC------CCHHHHHHHHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEGAQVIFFQK------DNPEGLSRAFSL 564 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~dG~~G~Lv~p------~D~eeLAeAI~~ 564 (1013)
..+|+...+..+-|+- --++++||+++|+|+|+-.. ......+...+.|+.+.. -+.+++.++|.+
T Consensus 350 ~~IL~H~~v~~FvtHc----GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~ 425 (472)
T PLN02670 350 VKILSHESVGGFLTHC----GWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRL 425 (472)
T ss_pred HHHhcCcccceeeecC----CcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHH
Confidence 4578888886666553 24689999999999998543 334455555678887753 258999999999
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Q 001781 565 FISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604 (1013)
Q Consensus 565 LL~d~elR~~~~~Mg~aARe~ae~fs~e~~~~~y~~Lye~ 604 (1013)
++.+++ ..++.+++++..+.+.......++.+.+..
T Consensus 426 vm~~~~----g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~ 461 (472)
T PLN02670 426 AMVDDA----GEEIRDKAKEMRNLFGDMDRNNRYVDELVH 461 (472)
T ss_pred HhcCcc----hHHHHHHHHHHHHHHhCcchhHHHHHHHHH
Confidence 998764 245566666655555554444444443333
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.16 Score=60.72 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=54.9
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhccC-CeEEEEc-------
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEG-AQVIFFQ------- 551 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~dG-~~G~Lv~------- 551 (1013)
++.+.+.. .-..+|...++..+-++- --.+++||+++|+|+|+-.. ......+.+. +.|+-+.
T Consensus 324 ~~~v~~w~-pQ~~iL~h~~v~~fvtHg----G~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 324 MGLVVPWC-DQLKVLCHSSVGGFWTHC----GWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred CEEEeccC-CHHHHhccCccceEEecC----chhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 56555633 235678888885555543 24689999999999998553 3345555542 3566553
Q ss_pred CCCHHHHHHHHHHHHhCc
Q 001781 552 KDNPEGLSRAFSLFISNG 569 (1013)
Q Consensus 552 p~D~eeLAeAI~~LL~d~ 569 (1013)
.-+.+++++++.+++.++
T Consensus 399 ~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 399 LVGREEIAELVKRFMDLE 416 (459)
T ss_pred cCcHHHHHHHHHHHhcCC
Confidence 136899999999999875
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.23 Score=59.73 Aligned_cols=114 Identities=10% Similarity=0.085 Sum_probs=67.8
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC----CCCchhhhcc-CCeEEEEcC-----C
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD----FPIIKEYVAE-GAQVIFFQK-----D 553 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd----vgGi~EiI~d-G~~G~Lv~p-----~ 553 (1013)
.+...+.... ..+|....+.++-++- --.+++||+++|+|+|+-. .......+.+ -+.|.-+.. -
T Consensus 344 g~~v~~w~PQ-~~vL~h~~v~~fvtH~----G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~ 418 (477)
T PLN02863 344 GLVIRGWAPQ-VAILSHRAVGAFLTHC----GWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVP 418 (477)
T ss_pred CEEecCCCCH-HHHhcCCCcCeEEecC----CchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCc
Confidence 5666664432 5577775554444442 2358999999999999854 3344454443 357766622 2
Q ss_pred CHHHHHHHHHHHH-hCcccHHHHHHHHHHHHHHHHh-hcHHHHHHHHHHHH
Q 001781 554 NPEGLSRAFSLFI-SNGKLSKFARTVASAGRLHAKN-MLALDCVTRYARIL 602 (1013)
Q Consensus 554 D~eeLAeAI~~LL-~d~elR~~~~~Mg~aARe~ae~-fs~e~~~~~y~~Ly 602 (1013)
+.+++++++.+++ ++++.|+..+++++.+++.+.+ =++.+.++.+.+.+
T Consensus 419 ~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i 469 (477)
T PLN02863 419 DSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHV 469 (477)
T ss_pred CHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 6789999999988 4445444455555555553332 34455555554433
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.25 Score=59.43 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=65.5
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchh-hhccCCeEEEEcC------
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKE-YVAEGAQVIFFQK------ 552 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~E-iI~dG~~G~Lv~p------ 552 (1013)
++...+.. .-..+|+...+..+-++- | -++++||+++|+|+|+-.. ..... ++..-+.|+.+..
T Consensus 341 rg~v~~w~-PQ~~iL~h~~vg~fvtH~---G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 415 (475)
T PLN02167 341 RGLVCGWA-PQVEILAHKAIGGFVSHC---G-WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY 415 (475)
T ss_pred CeeeeccC-CHHHHhcCcccCeEEeeC---C-cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence 34444532 234577776654443332 2 2489999999999998543 33333 2444456766632
Q ss_pred ---CCHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHHHH-hhcHHHHHHHHH
Q 001781 553 ---DNPEGLSRAFSLFISNG-KLSKFARTVASAGRLHAK-NMLALDCVTRYA 599 (1013)
Q Consensus 553 ---~D~eeLAeAI~~LL~d~-elR~~~~~Mg~aARe~ae-~fs~e~~~~~y~ 599 (1013)
-+.++++++|.+++.++ +.|+..+++++.+++.+. .=++.+.++.+.
T Consensus 416 ~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v 467 (475)
T PLN02167 416 GEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFI 467 (475)
T ss_pred CCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 26899999999999765 444555666666666433 333344444443
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.22 Score=59.52 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=54.3
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhccC-CeEEEEc-CCCHHH
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEG-AQVIFFQ-KDNPEG 557 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~dG-~~G~Lv~-p~D~ee 557 (1013)
+....+.. .-..+|...++..+-++- | -++++||+++|+|+|+-.. ......+.+. +.|+-+. .-+.++
T Consensus 325 ~g~v~~w~-PQ~~iL~h~~v~~fvtH~---G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 399 (451)
T PLN02410 325 RGYIVKWA-PQKEVLSHPAVGGFWSHC---G-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399 (451)
T ss_pred CeEEEccC-CHHHHhCCCccCeeeecC---c-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHH
Confidence 55555533 224478777775555443 2 3589999999999998543 3344555443 5676662 347899
Q ss_pred HHHHHHHHHhCcc
Q 001781 558 LSRAFSLFISNGK 570 (1013)
Q Consensus 558 LAeAI~~LL~d~e 570 (1013)
++++|.+++.+++
T Consensus 400 v~~av~~lm~~~~ 412 (451)
T PLN02410 400 VERAVKRLMVEEE 412 (451)
T ss_pred HHHHHHHHHcCCc
Confidence 9999999998764
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.3 Score=58.44 Aligned_cols=166 Identities=13% Similarity=0.138 Sum_probs=92.9
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCc-ccHHHHHHHHHHcCCCCCcEEE
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTD-GYNDALQEVASRLGLLEHSVRH 487 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e-~Y~e~Lkela~eLgL~dg~V~F 487 (1013)
+..++++..|+... .. ...++.+..-++. ...+||..++.... .....+++... .+ +...
T Consensus 268 ~~svvyvsfGS~~~-----~~-~~~~~e~a~~l~~--------~~~~flw~~~~~~~~~~~~~~~~~~~----~~-~g~v 328 (456)
T PLN02210 268 RSSVVYISFGSMLE-----SL-ENQVETIAKALKN--------RGVPFLWVIRPKEKAQNVQVLQEMVK----EG-QGVV 328 (456)
T ss_pred CCceEEEEeccccc-----CC-HHHHHHHHHHHHh--------CCCCEEEEEeCCccccchhhHHhhcc----CC-CeEE
Confidence 45678888898643 11 2233333333332 24567766764321 11122333221 12 3333
Q ss_pred cCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhcc-CCeEEEEcC------CCHH
Q 001781 488 YGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAE-GAQVIFFQK------DNPE 556 (1013)
Q Consensus 488 lG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~d-G~~G~Lv~p------~D~e 556 (1013)
.+.... ..+|+.+.+.++-++- | =.+++||+++|+|+|+-.. ......+.+ -+.|..+.. -+.+
T Consensus 329 ~~w~PQ-~~iL~h~~vg~FitH~---G-~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 403 (456)
T PLN02210 329 LEWSPQ-EKILSHMAISCFVTHC---G-WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVE 403 (456)
T ss_pred EecCCH-HHHhcCcCcCeEEeeC---C-cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHH
Confidence 453322 4588888865555543 2 2479999999999998543 334455554 467777642 3789
Q ss_pred HHHHHHHHHHhCcc---cHHHHHHHHHHHHHHHHh-hcHHHHHHHH
Q 001781 557 GLSRAFSLFISNGK---LSKFARTVASAGRLHAKN-MLALDCVTRY 598 (1013)
Q Consensus 557 eLAeAI~~LL~d~e---lR~~~~~Mg~aARe~ae~-fs~e~~~~~y 598 (1013)
++++++.+++.+++ .|+..++|++.+++.+.+ =++.+.++.+
T Consensus 404 ~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~ 449 (456)
T PLN02210 404 EVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLF 449 (456)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 99999999998764 444455666666664333 3344433333
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.16 Score=60.79 Aligned_cols=142 Identities=16% Similarity=0.139 Sum_probs=81.0
Q ss_pred HHHHHHcCC-CCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHH
Q 001781 399 YQLRKENGF-LKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASR 477 (1013)
Q Consensus 399 ~~~R~~lgi-~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~e 477 (1013)
..+..-+.- .++.++++..|++.. ...+..++++....++. |+ +||.-..+....
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~-----~~~~~~~~~~~~~~~~~-------~~-~~iW~~~~~~~~----------- 319 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVS-----SMPEEKLKEIAEAFENL-------PQ-RFIWKYEGEPPE----------- 319 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSST-----T-HHHHHHHHHHHHHCS-------TT-EEEEEETCSHGC-----------
T ss_pred cccchhhhccCCCCEEEEecCcccc-----hhHHHHHHHHHHHHhhC-------CC-cccccccccccc-----------
Confidence 334333333 356788888998643 12333344443333322 34 655444432111
Q ss_pred cCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----CchhhhccCCeEEEEcCC
Q 001781 478 LGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAEGAQVIFFQKD 553 (1013)
Q Consensus 478 LgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~EiI~dG~~G~Lv~p~ 553 (1013)
.+++ +|......++ .++|+...+-++-++ |--.++.||+.+|+|+|+-..- .....+++...|..++..
T Consensus 320 -~l~~-n~~~~~W~PQ-~~lL~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~ 392 (500)
T PF00201_consen 320 -NLPK-NVLIVKWLPQ-NDLLAHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKN 392 (500)
T ss_dssp -HHHT-TEEEESS--H-HHHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGG
T ss_pred -cccc-eEEEeccccc-hhhhhcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEec
Confidence 1223 6777664332 467877777666655 4467899999999999996543 234455555678878654
Q ss_pred --CHHHHHHHHHHHHhCccc
Q 001781 554 --NPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 554 --D~eeLAeAI~~LL~d~el 571 (1013)
+.+++.++|.++++|+..
T Consensus 393 ~~~~~~l~~ai~~vl~~~~y 412 (500)
T PF00201_consen 393 DLTEEELRAAIREVLENPSY 412 (500)
T ss_dssp C-SHHHHHHHHHHHHHSHHH
T ss_pred CCcHHHHHHHHHHHHhhhHH
Confidence 578999999999998764
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.5 Score=59.07 Aligned_cols=138 Identities=9% Similarity=-0.009 Sum_probs=95.6
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH--HHH----HHHHHHcCC
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN--DAL----QEVASRLGL 480 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~--e~L----kela~eLgL 480 (1013)
+.++.+.++++=|+.. .|.+.+.+.-+..+.....+ +..|.+. ++++|+-...|. ..+ ...++..+.
T Consensus 483 ~~p~~lfd~~~kRihe----YKRq~Lnl~~i~~ly~~i~~--d~~prv~-~iFaGKAhP~y~~aK~iIk~I~~~a~~in~ 555 (750)
T COG0058 483 VDPNALFDGQARRIHE----YKRQLLNLLDIERLYRILKE--DWVPRVQ-IIFAGKAHPADYAAKEIIKLINDVADVINN 555 (750)
T ss_pred cCCCcceeeeehhhhh----hhhhHHhHhhHHHHHHHHhc--CCCCceE-EEEeccCCCcchHHHHHHHHHHHHHHhhcc
Confidence 3456778888877655 36666665555555444432 3335666 578898544432 222 344444444
Q ss_pred CCCcEEEcC-Cc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhc--cCCeEEEEcC
Q 001781 481 LEHSVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVA--EGAQVIFFQK 552 (1013)
Q Consensus 481 ~dg~V~FlG-~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~--dG~~G~Lv~p 552 (1013)
.. +|.|+. +. .-...++.+|||-...|...-|..|.+=+-||.-|.+-|+|--|...|+.+ +++||+++..
T Consensus 556 ~l-kVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 556 KL-KVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred cc-eEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 33 688887 33 334568899999998887655589999999999999999999999999986 7899999964
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.86 Score=54.54 Aligned_cols=82 Identities=11% Similarity=0.117 Sum_probs=57.3
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhccC-CeEEEEcC------
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEG-AQVIFFQK------ 552 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~dG-~~G~Lv~p------ 552 (1013)
++.+.+... -..+|+...+.++-++- -.++++||+++|+|+|+-.. ......+.+. +.|+-+..
T Consensus 318 ~~~i~~W~P-Q~~iL~H~~v~~FvtHc----GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~ 392 (449)
T PLN02173 318 KSLVLKWSP-QLQVLSNKAIGCFMTHC----GWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGI 392 (449)
T ss_pred ceEEeCCCC-HHHHhCCCccceEEecC----ccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCc
Confidence 577667433 34588888877776663 25789999999999998543 3345555543 45665532
Q ss_pred CCHHHHHHHHHHHHhCcc
Q 001781 553 DNPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 553 ~D~eeLAeAI~~LL~d~e 570 (1013)
-+.+++++++.+++.+++
T Consensus 393 ~~~e~v~~av~~vm~~~~ 410 (449)
T PLN02173 393 AKREEIEFSIKEVMEGEK 410 (449)
T ss_pred ccHHHHHHHHHHHhcCCh
Confidence 167999999999998754
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.6 Score=56.27 Aligned_cols=112 Identities=14% Similarity=0.183 Sum_probs=66.3
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----Cch-hhhccCCeEEEEcC------
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIK-EYVAEGAQVIFFQK------ 552 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~-EiI~dG~~G~Lv~p------ 552 (1013)
++.+.+.. .-..+|+...+..+-++- | -.+++||+.+|+|+|+-... ... ..++.-+.|..++.
T Consensus 343 ~g~v~~W~-PQ~~iL~H~~v~~FvtH~---G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~ 417 (481)
T PLN02554 343 IGKVIGWA-PQVAVLAKPAIGGFVTHC---G-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDL 417 (481)
T ss_pred CceEEeeC-CHHHHhCCcccCcccccC---c-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccc
Confidence 45555532 134577555554444442 2 35899999999999986533 333 33444445666531
Q ss_pred -------CCHHHHHHHHHHHHh-CcccHHHHHHHHHHHHHHHH-hhcHHHHHHHHHH
Q 001781 553 -------DNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAK-NMLALDCVTRYAR 600 (1013)
Q Consensus 553 -------~D~eeLAeAI~~LL~-d~elR~~~~~Mg~aARe~ae-~fs~e~~~~~y~~ 600 (1013)
-+.+++.++|.+++. +++.|+..+++++.+++.+. -=++...+..+.+
T Consensus 418 ~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~ 474 (481)
T PLN02554 418 LAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQ 474 (481)
T ss_pred cccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 268999999999996 55555555666666666332 3333444444433
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.81 Score=55.07 Aligned_cols=101 Identities=14% Similarity=0.165 Sum_probs=60.7
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhcc-CCeEEEEc---------CCCHHHHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAE-GAQVIFFQ---------KDNPEGLSR 560 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~d-G~~G~Lv~---------p~D~eeLAe 560 (1013)
..+|+...+..+-++- | -++++||+++|+|+|+-.. ......+.+ -+.|+-+. .-+.+++.+
T Consensus 343 ~~IL~H~~vg~FvTH~---G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~ 418 (468)
T PLN02207 343 VEILAHKAVGGFVSHC---G-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIET 418 (468)
T ss_pred HHHhcccccceeeecC---c-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHH
Confidence 4577777775555553 2 3478999999999998543 334454433 34565331 126789999
Q ss_pred HHHHHHh--CcccHHHHHHHHHHHHHHHH-hhcHHHHHHHHH
Q 001781 561 AFSLFIS--NGKLSKFARTVASAGRLHAK-NMLALDCVTRYA 599 (1013)
Q Consensus 561 AI~~LL~--d~elR~~~~~Mg~aARe~ae-~fs~e~~~~~y~ 599 (1013)
+|.+++. +++.|+..+++++.+++.+. -=++.+.+..+.
T Consensus 419 av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v 460 (468)
T PLN02207 419 AIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFI 460 (468)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 9999997 34444445555555555332 233444443433
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=93.80 E-value=5.1 Score=44.79 Aligned_cols=57 Identities=14% Similarity=0.093 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC
Q 001781 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1013)
Q Consensus 469 e~Lkela~eLgL~dg~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd 533 (1013)
+..+++.+.+.-.. .|......+++..+++.||++|-...+ .++-|+.+|+|+|+-.
T Consensus 220 ~~~~~l~~~~~~~~-~i~~~~~~~e~~~~i~~~~~vI~~RlH-------~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 220 PLARALRDQLLGPA-EVLSPLDPEELLGLFASARLVIGMRLH-------ALILAAAAGVPFVALS 276 (298)
T ss_pred HHHHHHHHhcCCCc-EEEecCCHHHHHHHHhhCCEEEEechH-------HHHHHHHcCCCEEEee
Confidence 55566666554333 444333556788899999988777665 6899999999999753
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.75 E-value=14 Score=41.29 Aligned_cols=249 Identities=16% Similarity=0.166 Sum_probs=127.6
Q ss_pred CCceehHHHHHHHHHHCCCEEEEEEcCC-CCchHHHHHHH----------HHHHHHhhcCccEEEEcCcchHHHHHHHHH
Q 001781 235 DSRSLLLITVVKNLQKLGYVFKIYAVRS-GNSHSLWEQIA----------GQISILGQEQYSLIDWSIFDGIIADSLEAK 303 (1013)
Q Consensus 235 gg~~l~vl~Lak~L~e~GyeV~Vlt~~~-g~~~~~~r~i~----------~Li~lLk~~kpDIIh~~~~~~~lv~~Laak 303 (1013)
.|..-..+.+++.|...-|.+.++.... ++....|-.+. ....-..+..||++.+-......+...+.+
T Consensus 11 tGnt~QaiaLa~~l~r~eyttk~l~~~~l~~lP~~wl~~yp~~~~~~l~~~~~~r~p~~~Pdl~I~aGrrta~l~~~lkk 90 (329)
T COG3660 11 TGNTHQAIALAEQLTRSEYTTKLLEYNNLAKLPNFWLAYYPIHILRELFGPRLSRKPEQRPDLIITAGRRTAPLAFYLKK 90 (329)
T ss_pred CccHHHHHHHHHHhhccceEEEEeeccccccCchhhhhcCccHhHHHhhcCccccCccCCCceEEecccchhHHHHHHHH
Confidence 4566677888888887667777775541 11222221111 111112235689887766666655555554
Q ss_pred HhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCchhhhccCCCCCEEEeCCCC
Q 001781 304 EAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSP 383 (1013)
Q Consensus 304 ~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~~~ly~~l~~~ki~VIPngg 383 (1013)
.. .++++|-. .+..+. ++.-|.||.+..+..... .....++.-|-+.+
T Consensus 91 ~~---------~~~~vVqI-~~Prlp---------------------~~~fDlvivp~HD~~~~~-s~~~~Nilpi~Gs~ 138 (329)
T COG3660 91 KF---------GGIKVVQI-QDPRLP---------------------YNHFDLVIVPYHDWREEL-SDQGPNILPINGSP 138 (329)
T ss_pred hc---------CCceEEEe-eCCCCC---------------------cccceEEeccchhhhhhh-hccCCceeeccCCC
Confidence 43 34444443 343222 223567777766655442 22334555554432
Q ss_pred CCcccccccCcchhHHHHHHHcCCCCCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCC
Q 001781 384 ADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNS 463 (1013)
Q Consensus 384 VDl~~~~~F~p~~~~~~~R~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G 463 (1013)
-++ .+.+- ....+.++..+.+ +..++-++||.-.+ ...-..+.+.+....+.+.+. + ....|++-.-.-
T Consensus 139 h~V--t~~~l-Aa~~e~~~~~~p~-~rq~vAVlVGg~nk--~f~~~~d~a~q~~~~l~k~l~---~--~g~~~lisfSRR 207 (329)
T COG3660 139 HNV--TSQRL-AALREAFKHLLPL-PRQRVAVLVGGNNK--AFVFQEDKAHQFASLLVKILE---N--QGGSFLISFSRR 207 (329)
T ss_pred Ccc--cHHHh-hhhHHHHHhhCCC-CCceEEEEecCCCC--CCccCHHHHHHHHHHHHHHHH---h--CCceEEEEeecC
Confidence 221 01111 1223344333333 45678888885322 222223333333333333331 1 245644333332
Q ss_pred CcccHHHHHHHHHH-cCCCCCcEEEcCC--c-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC
Q 001781 464 TDGYNDALQEVASR-LGLLEHSVRHYGF--N-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP 535 (1013)
Q Consensus 464 ~e~Y~e~Lkela~e-LgL~dg~V~FlG~--~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg 535 (1013)
. .+.++..++. +.-.. -+.+.+. . .-..++|++||.+|.+...- .-..||.+.|+||-+-...
T Consensus 208 T---p~~~~s~l~~~l~s~~-~i~w~~~d~g~NPY~~~La~Adyii~TaDSi-----nM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 208 T---PDTVKSILKNNLNSSP-GIVWNNEDTGYNPYIDMLAAADYIISTADSI-----NMCSEAASTGKPVFILEPP 274 (329)
T ss_pred C---cHHHHHHHHhccccCc-eeEeCCCCCCCCchHHHHhhcceEEEecchh-----hhhHHHhccCCCeEEEecC
Confidence 2 2677777665 44332 3555543 1 23678999999999885432 2467999999999875433
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.81 Score=54.87 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=59.4
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhccC-CeEEEEc-----CC
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEG-AQVIFFQ-----KD 553 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~dG-~~G~Lv~-----p~ 553 (1013)
+..+.+... -.++|+...+.++-++-. -++++||+.+|+|+|+-.. ......+.+. +.|+-+. .-
T Consensus 328 ~g~v~~W~P-Q~~iL~h~~vg~fvtH~G----~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 328 VGMIVSWCS-QIEVLRHRAVGCFVTHCG----WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred CeEEEeeCC-HHHHhCCcccceEEeeCC----cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 555555332 245888888877766642 4689999999999998543 3344445431 2454442 12
Q ss_pred CHHHHHHHHHHHHhCcc--cHHHHHHHHHHHHH
Q 001781 554 NPEGLSRAFSLFISNGK--LSKFARTVASAGRL 584 (1013)
Q Consensus 554 D~eeLAeAI~~LL~d~e--lR~~~~~Mg~aARe 584 (1013)
+.+++++++.++++++. .|+...++.+.+++
T Consensus 403 ~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~ 435 (455)
T PLN02152 403 ERGEIRRCLEAVMEEKSVELRESAEKWKRLAIE 435 (455)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 68999999999998654 22233334444444
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.67 E-value=1 Score=54.43 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=50.1
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcC----CCCchhhh-ccCCeEEEEcC-------CCHHHHHHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD----FPIIKEYV-AEGAQVIFFQK-------DNPEGLSRAF 562 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASd----vgGi~EiI-~dG~~G~Lv~p-------~D~eeLAeAI 562 (1013)
..+|...++..+-++- | -++++||+++|+|+|+-. .......+ ..-+.|+.+.. -+.++++++|
T Consensus 350 ~~iL~h~~vg~fvtH~---G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av 425 (480)
T PLN00164 350 KEILAHAAVGGFVTHC---G-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAV 425 (480)
T ss_pred HHHhcCcccCeEEeec---c-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHH
Confidence 5678888875555553 2 358999999999999854 33444444 33356776632 2579999999
Q ss_pred HHHHhCcc
Q 001781 563 SLFISNGK 570 (1013)
Q Consensus 563 ~~LL~d~e 570 (1013)
.+++.+++
T Consensus 426 ~~vm~~~~ 433 (480)
T PLN00164 426 RSLMGGGE 433 (480)
T ss_pred HHHhcCCc
Confidence 99998753
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.43 E-value=2.1 Score=51.13 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=55.8
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhcc-CCeEEEEcC-----C
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAE-GAQVIFFQK-----D 553 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~d-G~~G~Lv~p-----~ 553 (1013)
++...+...+ .++|+...+.++-|+-. =++++||+++|+|+|+-.. ......+.+ -..|..+.. -
T Consensus 312 g~~v~~W~PQ-~~iL~H~~v~~FvtHcG----~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 386 (442)
T PLN02208 312 GVVWGGWVQQ-PLILDHPSIGCFVNHCG----PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWF 386 (442)
T ss_pred CcEeeccCCH-HHHhcCCccCeEEccCC----chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcC
Confidence 4555452211 45888888877776642 4689999999999998543 334444443 356776643 2
Q ss_pred CHHHHHHHHHHHHhCcc
Q 001781 554 NPEGLSRAFSLFISNGK 570 (1013)
Q Consensus 554 D~eeLAeAI~~LL~d~e 570 (1013)
+.++++++|.++++++.
T Consensus 387 ~~~~l~~ai~~~m~~~~ 403 (442)
T PLN02208 387 SKESLSNAIKSVMDKDS 403 (442)
T ss_pred cHHHHHHHHHHHhcCCc
Confidence 78999999999998763
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=93.21 E-value=4.7 Score=45.10 Aligned_cols=290 Identities=12% Similarity=0.085 Sum_probs=135.9
Q ss_pred ceehHHHHHHHHHHCCCEEEEEEcCCCCchH--------------HHHHHHHHHHHHhhcCccEEEEcCcchH-----HH
Q 001781 237 RSLLLITVVKNLQKLGYVFKIYAVRSGNSHS--------------LWEQIAGQISILGQEQYSLIDWSIFDGI-----IA 297 (1013)
Q Consensus 237 ~~l~vl~Lak~L~e~GyeV~Vlt~~~g~~~~--------------~~r~i~~Li~lLk~~kpDIIh~~~~~~~-----lv 297 (1013)
+..+..+.-.++.+.|+++.++...+..+.. ..+.+..+++.+. .+||+....+++. ++
T Consensus 3 VTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~~~~e~de~v~~vN--~yDI~m~nSvPa~~vqE~~i 80 (355)
T PF11440_consen 3 VTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKYLAKEYDETVKKVN--DYDIVMFNSVPATKVQEAII 80 (355)
T ss_dssp HHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE-TTTHHHHHHHHHT--SSSEEEEEE--BTTS-HHHH
T ss_pred ccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehhhHHHHHHHHHHhh--ccCEEEEecccCchHHHHHH
Confidence 3455667888999999999999875533211 1134444555554 8898877655443 23
Q ss_pred HHHHHHHhhhhcccCCCCCCcEEEEEcCCccccccchhhhhhHHHHHHHHHHHhccccEEEEcCCCc-------hhhhcc
Q 001781 298 DSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL-------PMLYSV 370 (1013)
Q Consensus 298 ~~Laak~~~s~l~qep~~~IPVI~tvHg~~l~~~l~~y~~~~l~klLs~~~~~l~~AD~VI~~S~~~-------~~ly~~ 370 (1013)
.... +.+. .-...++||...|+......- .... ....++.+|.|.+-+... ..++..
T Consensus 81 NnY~-kii~-----~Ik~~ik~V~~~Hdh~~lsI~---rn~~-------le~~m~~~DvIfshs~~g~f~kv~m~~l~Ps 144 (355)
T PF11440_consen 81 NNYE-KIIK-----KIKPSIKVVGFMHDHNKLSID---RNPY-------LEGTMNEMDVIFSHSDNGWFSKVLMKELLPS 144 (355)
T ss_dssp HHHH-HHHH-----CS-TTSEEEEEE---SHHHHT---TBSS-------HHHHHHH-SEEEES-TTSHHHHTHHHHHS-S
T ss_pred HHHH-HHHH-----hccccceeEEEeeccceeecc---cccc-------HHHHHHhhcEEEeccccchHHHHHHHhhccc
Confidence 3332 2220 001245667777884311000 0111 223467789988744321 112211
Q ss_pred C--CCCCEEEeCCCCCCcccccccCcchhHHHHHHHcCCCCCcEEE---EEEccCCCcCccccCHHHHHHHHHHHHHHHh
Q 001781 371 L--DAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVV---VVVGSSFFYNELSWDYAVAMHDVGPLLIKYA 445 (1013)
Q Consensus 371 l--~~~ki~VIPnggVDl~~~~~F~p~~~~~~~R~~lgi~~d~~vI---L~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~ 445 (1013)
- ..+++...|.. ..|.|...-...|..+-.....+.. +|+||... +||+..+++.-++.++
T Consensus 145 ~~~l~~~i~~~p~v-------~nfqpp~~i~~~Rstywkd~se~nmnv~~yigR~Tt----~kG~~~mfD~h~~~lK--- 210 (355)
T PF11440_consen 145 KVSLFDRIKKFPMV-------FNFQPPMDINKYRSTYWKDVSEKNMNVNRYIGRQTT----WKGPRRMFDLHEKILK--- 210 (355)
T ss_dssp S--SSS-------E-------EE----B-HHHHHHHH---GGGSEEEEEEEE--SSG----GG-HHHHHHHHHHTTT---
T ss_pred cCchhhhhhhccee-------eecCCcccHHHHHHHHhhhhHhhhcccceeeeeeee----ecCcHHHhhhHHHhcC---
Confidence 0 11233333332 2344433334556666554455555 89999866 8999988877766532
Q ss_pred hcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcC---------------CCC-CcEEEcCC--cccHHHHHHHccEEEEc
Q 001781 446 RRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLG---------------LLE-HSVRHYGF--NGDVNGVLLMADIVLYG 507 (1013)
Q Consensus 446 ~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLg---------------L~d-g~V~FlG~--~eDl~~lLaaADIfVlP 507 (1013)
+ +.++ -++-|-.... +.+ . +.+.+ +.. +-|..+|+ .++..+.|+.+-..+.-
T Consensus 211 ---~--~~~~-t~~~GierS~--A~~-~-i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~ 280 (355)
T PF11440_consen 211 ---P--AGFK-TIMEGIERSP--AKI-S-IKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQL 280 (355)
T ss_dssp ---T--TT-E-EEEE---SST--HHH-H-HHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-
T ss_pred ---C--cchh-HHhhhhhcCC--cee-e-eecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeec
Confidence 2 4677 5677754442 222 1 11111 111 23666673 26677888877666544
Q ss_pred cCC----CCCCccHHHHHHHHhCC-CEEEcCCCCch-------hhhccCCeEEEEcCCCHHHHHHHHHHHHhC
Q 001781 508 SSQ----VEQGFPSLIVRAMTFGI-PVITPDFPIIK-------EYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1013)
Q Consensus 508 S~~----EEEGFGivVLEAMA~G~-PVIASdvgGi~-------EiI~dG~~G~Lv~p~D~eeLAeAI~~LL~d 568 (1013)
+.. -++..-.+-+|..|||+ ||.-...|..- -++.+....+.++..|.++..+.|.++.++
T Consensus 281 ~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 281 SKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp ----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccchHHHHHHHHHHHhcc
Confidence 321 11145678999999997 55544444322 244444567888999999999999888765
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.03 E-value=2.5 Score=50.77 Aligned_cols=71 Identities=7% Similarity=-0.027 Sum_probs=49.2
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----Cchhhhcc-CCeEEEEcC-----CCHHHHHHHHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYVAE-GAQVIFFQK-----DNPEGLSRAFSL 564 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~EiI~d-G~~G~Lv~p-----~D~eeLAeAI~~ 564 (1013)
..+|+...+.++-++- --.+++||+++|+|+|+-... .....+.+ -..|+-+.. -+.+++.+++.+
T Consensus 328 ~~vL~h~~v~~FvtH~----G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~ 403 (453)
T PLN02764 328 PLILSHPSVGCFVSHC----GFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINS 403 (453)
T ss_pred HHHhcCcccCeEEecC----CchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHH
Confidence 4577777665555543 246899999999999986543 34455543 345665432 378999999999
Q ss_pred HHhCc
Q 001781 565 FISNG 569 (1013)
Q Consensus 565 LL~d~ 569 (1013)
+++++
T Consensus 404 vm~~~ 408 (453)
T PLN02764 404 VMKRD 408 (453)
T ss_pred HhcCC
Confidence 99875
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.86 E-value=1.5 Score=52.99 Aligned_cols=112 Identities=7% Similarity=0.036 Sum_probs=69.0
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----Cchhhh-ccCCeEEEEcC----CC
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYV-AEGAQVIFFQK----DN 554 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~EiI-~dG~~G~Lv~p----~D 554 (1013)
.+.+.+... -..+|+...+..+-++- --++++||+.+|+|+|+-... .....+ +.-+.|.-++. -+
T Consensus 339 g~vv~~W~P-Q~~iL~h~~vg~FitH~----G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 413 (481)
T PLN02992 339 GFVVPSWAP-QAEILAHQAVGGFLTHC----GWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS 413 (481)
T ss_pred CEEEeecCC-HHHHhCCcccCeeEecC----chhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence 466655332 24578888875555553 246899999999999986543 344454 34456766643 37
Q ss_pred HHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHHHH---hhcHHHHHHHHHH
Q 001781 555 PEGLSRAFSLFISNGK---LSKFARTVASAGRLHAK---NMLALDCVTRYAR 600 (1013)
Q Consensus 555 ~eeLAeAI~~LL~d~e---lR~~~~~Mg~aARe~ae---~fs~e~~~~~y~~ 600 (1013)
.++++++|.+++.+++ .|+..+++.+.+++.+. .=++.+.+..+.+
T Consensus 414 ~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~ 465 (481)
T PLN02992 414 RSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTK 465 (481)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Confidence 8999999999998753 23344555555555442 2344444444433
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.76 E-value=1.8 Score=51.80 Aligned_cols=85 Identities=8% Similarity=0.013 Sum_probs=55.6
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhc-cCCeEEEEcC-----CCHHHHHHHHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVA-EGAQVIFFQK-----DNPEGLSRAFSL 564 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~-dG~~G~Lv~p-----~D~eeLAeAI~~ 564 (1013)
..+|+...+..+-++- --++++||+++|+|+|+-.. ......+. .-+.|..+.. -+.+++++++.+
T Consensus 323 ~~vL~h~~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~ 398 (446)
T PLN00414 323 PLILSHPSVGCFVNHC----GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKS 398 (446)
T ss_pred HHHhcCCccceEEecC----chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHH
Confidence 4578777665554443 24689999999999998553 33445553 3467776642 378999999999
Q ss_pred HHhCcccHHHHHHHHHHHHHH
Q 001781 565 FISNGKLSKFARTVASAGRLH 585 (1013)
Q Consensus 565 LL~d~elR~~~~~Mg~aARe~ 585 (1013)
++.++. +..+++.+++++.
T Consensus 399 ~m~~~~--e~g~~~r~~a~~~ 417 (446)
T PLN00414 399 VMDKDS--EIGNLVKRNHKKL 417 (446)
T ss_pred HhcCCh--hhHHHHHHHHHHH
Confidence 998753 1124444454443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.51 E-value=2.3 Score=51.34 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=58.2
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCC----CCchhhhccC-CeEEEEc-----C-
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDF----PIIKEYVAEG-AQVIFFQ-----K- 552 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdv----gGi~EiI~dG-~~G~Lv~-----p- 552 (1013)
++.+.+...+ ..+|+...+..+-++- | -.+++||+.+|+|+|+-.. ......+.+. +.|+-+. .
T Consensus 338 ~g~v~~W~PQ-~~iL~H~~v~~FvtH~---G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~ 412 (480)
T PLN02555 338 KGKIVQWCPQ-EKVLAHPSVACFVTHC---G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENK 412 (480)
T ss_pred ceEEEecCCH-HHHhCCCccCeEEecC---C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccC
Confidence 5655553322 4467554444444432 2 4589999999999998653 3344445543 5676662 1
Q ss_pred -CCHHHHHHHHHHHHhCcc---cHHHHHHHHHHHHH
Q 001781 553 -DNPEGLSRAFSLFISNGK---LSKFARTVASAGRL 584 (1013)
Q Consensus 553 -~D~eeLAeAI~~LL~d~e---lR~~~~~Mg~aARe 584 (1013)
-+.++++++|.+++.+++ .|+..++|++.+++
T Consensus 413 ~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~ 448 (480)
T PLN02555 413 LITREEVAECLLEATVGEKAAELKQNALKWKEEAEA 448 (480)
T ss_pred cCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 257899999999997653 33334445555554
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.72 E-value=12 Score=47.39 Aligned_cols=151 Identities=12% Similarity=0.073 Sum_probs=104.8
Q ss_pred CCcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcC--CCcc-cHHHHHH----HHHHc---
Q 001781 409 KDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGN--STDG-YNDALQE----VASRL--- 478 (1013)
Q Consensus 409 ~d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~--G~e~-Y~e~Lke----la~eL--- 478 (1013)
.++.+|+-+-|+.. .||...=+.|+.+++.++++... .+. ++.+.. ..+. -.+.++. .+.+.
T Consensus 274 ~g~klilgvD~~d~----~kg~~~Kl~a~e~~L~~~pe~~~---kVv-liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~ 345 (732)
T KOG1050|consen 274 KGKKLILGVDRLDS----IKGIQLKLLAFEQFLEEYPEWID---KVV-LIQIENPKRTDGKEVEELKFCVSVHVRRINEK 345 (732)
T ss_pred cCCceEeccccccc----ccCchHHHHHHHHHHHhChhhhc---eEE-EEEEecCCcccchHHHHHHHHhHhhhhhhhhc
Confidence 36678888888866 67888888899999988876544 344 223332 1111 0112222 22211
Q ss_pred -CCCC-CcEEEcC---CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhC----CCEEEcCCCCchhhhccCCeEEE
Q 001781 479 -GLLE-HSVRHYG---FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFG----IPVITPDFPIIKEYVAEGAQVIF 549 (1013)
Q Consensus 479 -gL~d-g~V~FlG---~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G----~PVIASdvgGi~EiI~dG~~G~L 549 (1013)
+-.. ..|+++- +..++-+++..+|+++..+..+ |..++.+|+.+|. .+.|.+..-|..+..+++ ..+
T Consensus 346 f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rd--Gmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aiv 421 (732)
T KOG1050|consen 346 FGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRD--GMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIV 421 (732)
T ss_pred cCCcccceEEEeeccCCHHHHhhhHHhhhheeeccccc--ccchhhhHHHHhhcccCCceEEeeecccccccccc--CEE
Confidence 1000 1244333 3467889999999999999998 9999999998885 678888888888877655 778
Q ss_pred EcCCCHHHHHHHHHHHHhCccc
Q 001781 550 FQKDNPEGLSRAFSLFISNGKL 571 (1013)
Q Consensus 550 v~p~D~eeLAeAI~~LL~d~el 571 (1013)
+.|.|.++++.+|..+++.++.
T Consensus 422 vnpw~~~~~~~~i~~al~~s~~ 443 (732)
T KOG1050|consen 422 VNPWDGDEFAILISKALTMSDE 443 (732)
T ss_pred ECCcchHHHHHHHHHHhhcCHH
Confidence 8999999999999999998874
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.84 Score=57.64 Aligned_cols=148 Identities=14% Similarity=0.016 Sum_probs=97.0
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHH-HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH--HHHHHHHHHcC----
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN--DALQEVASRLG---- 479 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dl-LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~--e~Lkela~eLg---- 479 (1013)
+.++.+.++++=|+.. .|.+.+ ++..+..+.+-...-...-.... +|++|+-...|. +.+-+++..+.
T Consensus 523 ldp~slfdvq~KR~he----YKRq~LNil~ii~~y~~i~~~p~~~~~P~~-~IFaGKAaP~y~~aK~iIklI~~va~~iN 597 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHE----YKRQLLNVLHVIYLYNRIKEDPPKDIVPRT-VIFGGKAAPGYHMAKLIIKLINSVAEVVN 597 (794)
T ss_pred cCccccchhhheechh----hhHHHHHHhhhHHHHHHHHhCCCcCCCCeE-EEEEecCCCCcHHHHHHHHHHHHHHHHhc
Confidence 4566677777777644 367777 66666655433211000011345 468998555432 33444444333
Q ss_pred ----CCCC--cEEEcC-Cc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--CCeEEE
Q 001781 480 ----LLEH--SVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1013)
Q Consensus 480 ----L~dg--~V~FlG-~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d--G~~G~L 549 (1013)
+. + +|.|+. +. .-...++.+|||-...|...-|..|..=+-+|.-|.+.|++--|...|+.++ ++|+|+
T Consensus 598 ~Dp~v~-~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 598 NDPAVG-DKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred cChhhC-CceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 22 2 477777 32 4456789999999998876555889999999999999999999999999877 789999
Q ss_pred EcCCCHHHHHHH
Q 001781 550 FQKDNPEGLSRA 561 (1013)
Q Consensus 550 v~p~D~eeLAeA 561 (1013)
|- .+.++..+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 96 355555543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=91.27 E-value=1.4 Score=55.78 Aligned_cols=148 Identities=9% Similarity=0.002 Sum_probs=96.5
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHH-HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH--HHHHHHHHHcC----
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN--DALQEVASRLG---- 479 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dl-LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~--e~Lkela~eLg---- 479 (1013)
+.++.+.++++=|+.. .|...+ ++..+..+.+-...-........ +|++|+-...|. +.+-+++..+.
T Consensus 539 ldp~sLfd~qakR~he----YKRq~LNil~~i~ry~~i~~~p~~~~~P~~-~IFaGKAaP~y~~aK~iIk~I~~va~~in 613 (815)
T PRK14986 539 VNPKALFDVQIKRIHE----YKRQLMNVLHVITRYNRIKADPDAKWVPRV-NIFAGKAASAYYMAKHIIHLINDVAKVIN 613 (815)
T ss_pred cCcccceeeeehhhhh----hhhhhHHHhhhHHHHHHHHhCCCcCCCCeE-EEEeecCCCCcHHHHHHHHHHHHHHHHhc
Confidence 5566777777777644 377777 77776655433211000002456 468998554432 33333332221
Q ss_pred ----CCCC--cEEEcC-Cc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--CCeEEE
Q 001781 480 ----LLEH--SVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1013)
Q Consensus 480 ----L~dg--~V~FlG-~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d--G~~G~L 549 (1013)
+. + +|.|+. +. .-...++.+|||-...|...-|..|.+=+-+|.-|.+.|++--|.+.|+.++ ++||++
T Consensus 614 ~Dp~v~-~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 614 NDPQIG-DKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred cChhhc-CceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 11 2 477777 33 3455789999999998876555889999999999999999999999999886 789999
Q ss_pred EcCCCHHHHHHH
Q 001781 550 FQKDNPEGLSRA 561 (1013)
Q Consensus 550 v~p~D~eeLAeA 561 (1013)
+. .+.++..+.
T Consensus 693 fG-~~~~ev~~~ 703 (815)
T PRK14986 693 FG-NTAEEVEAL 703 (815)
T ss_pred eC-CCHHHHHHH
Confidence 96 355555543
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=91.09 E-value=2.5 Score=52.92 Aligned_cols=148 Identities=9% Similarity=0.031 Sum_probs=83.6
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHH-HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH--HHHHHHHHHc-----
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN--DALQEVASRL----- 478 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dl-LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~--e~Lkela~eL----- 478 (1013)
+.++...++++-|+.. .|...+ ++..+..+.+-............ +|++|+-...|. +.+-+++.++
T Consensus 440 ldp~slfdv~~rR~he----YKRq~LniL~ii~~y~rik~~p~~~~~Pv~-~IFaGKAhP~d~~gK~iIk~I~~va~~in 514 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHE----YKRQLLNILHIIDRYNRIKNNPNKKIRPVQ-FIFAGKAHPGDYMGKEIIKLINNVAEVIN 514 (713)
T ss_dssp --TTSEEEEEES-SCC----CCTHHHHHHHHHHHHHHHHHSTTSCCS-EE-EEEE----TT-HHHHHHHHHHHHHHHHHC
T ss_pred CCcchhhhhhhhhccc----ccccCcccccHHHHHHHHHhcccCCCCCeE-EEEeccCCCCcHHHHHHHHHHHHHHHHHh
Confidence 5678888899988755 366666 45555444332211111113466 469998544432 3333333322
Q ss_pred ---CCCC-CcEEEcC-Cc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--CCeEEEE
Q 001781 479 ---GLLE-HSVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIFF 550 (1013)
Q Consensus 479 ---gL~d-g~V~FlG-~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d--G~~G~Lv 550 (1013)
.+.+ .+|.|+. +. .-...++.++||-...|...-|..|.+-+-||.-|.+.|++--|...|+.+. .++.|+|
T Consensus 515 ~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 515 NDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp T-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEc
Confidence 1221 1578887 32 3345788999999998876556999999999999999999999999998754 3578888
Q ss_pred cCCCHHHHHH
Q 001781 551 QKDNPEGLSR 560 (1013)
Q Consensus 551 ~p~D~eeLAe 560 (1013)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 5 34555433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.62 E-value=6.7 Score=47.67 Aligned_cols=112 Identities=9% Similarity=-0.000 Sum_probs=64.6
Q ss_pred cEEEcCCcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCC----chhhhc-cCCeEEEEc-------
Q 001781 484 SVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVA-EGAQVIFFQ------- 551 (1013)
Q Consensus 484 ~V~FlG~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgG----i~EiI~-dG~~G~Lv~------- 551 (1013)
++...+.... ..+|...++..+-++- -.++++||+++|+|+|+-...+ ....+. .-+.|+-+.
T Consensus 345 g~~v~~w~pq-~~iL~h~~v~~fvtH~----G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~ 419 (491)
T PLN02534 345 GLLIKGWAPQ-VLILSHPAIGGFLTHC----GWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRW 419 (491)
T ss_pred CeeccCCCCH-HHHhcCCccceEEecC----ccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccc
Confidence 5666563332 5588888886666553 3568999999999999865432 222232 212333221
Q ss_pred --------CCCHHHHHHHHHHHHhC--c---ccHHHHHHHHHHHHHHHHh-hcHHHHHHHHHH
Q 001781 552 --------KDNPEGLSRAFSLFISN--G---KLSKFARTVASAGRLHAKN-MLALDCVTRYAR 600 (1013)
Q Consensus 552 --------p~D~eeLAeAI~~LL~d--~---elR~~~~~Mg~aARe~ae~-fs~e~~~~~y~~ 600 (1013)
.-+.+++++++.+++.+ + +.|+..+++++.+++.+.+ =++.+.++.+.+
T Consensus 420 ~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~ 482 (491)
T PLN02534 420 GDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQ 482 (491)
T ss_pred cccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 12688999999999962 1 2334445555555553322 334444444433
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=89.46 E-value=2.1 Score=54.43 Aligned_cols=147 Identities=14% Similarity=0.042 Sum_probs=96.4
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHH-HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH--HHHHHHHHHcC----
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN--DALQEVASRLG---- 479 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dl-LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~--e~Lkela~eLg---- 479 (1013)
+.++.+.++++=|+.. .|.+.+ ++..+..+.+-...-........ +|++|+-...|. +.+-+++..+.
T Consensus 526 ldp~slfdvq~KR~he----YKRq~LNil~ii~~y~~i~~~p~~~~~P~~-~IFaGKAaP~y~~aK~iIklI~~va~~in 600 (797)
T cd04300 526 VDPDSLFDVQVKRIHE----YKRQLLNVLHIIHLYNRIKENPNADIVPRT-FIFGGKAAPGYYMAKLIIKLINAVADVVN 600 (797)
T ss_pred cCCCccEEEEeeechh----hhhhhhHHHhhHHHHHHHHhCCCcCCCCeE-EEEeccCCCCcHHHHHHHHHHHHHHHHhc
Confidence 5677788888888755 366676 66666555433211000002355 468998555432 33333333222
Q ss_pred ----CCCC--cEEEcC-Cc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--CCeEEE
Q 001781 480 ----LLEH--SVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1013)
Q Consensus 480 ----L~dg--~V~FlG-~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d--G~~G~L 549 (1013)
+. + +|.|+. +. .-...++.+|||-...|...-|.-|..=+-+|.-|.+.|++--|...|+.++ ++|+|+
T Consensus 601 ~Dp~v~-~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 601 NDPDVG-DKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred cChhcC-CceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 11 2 477777 32 4456789999999988876555889999999999999999999999999877 789999
Q ss_pred EcCCCHHHHHH
Q 001781 550 FQKDNPEGLSR 560 (1013)
Q Consensus 550 v~p~D~eeLAe 560 (1013)
|- .+.++..+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 96 34555443
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=88.07 E-value=1.7 Score=54.90 Aligned_cols=148 Identities=9% Similarity=-0.002 Sum_probs=95.3
Q ss_pred CCCCcEEEEEEccCCCcCccccCHHH-HHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccH--HHHHHHHHHcC--C-
Q 001781 407 FLKDEIVVVVVGSSFFYNELSWDYAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYN--DALQEVASRLG--L- 480 (1013)
Q Consensus 407 i~~d~~vIL~VGRl~~yk~~~Kg~dl-LLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~--e~Lkela~eLg--L- 480 (1013)
+.++.+.++++=|+.. .|.+.+ ++..+..+.+-...-........ +|++|+-...|. +.+-+++..+. +
T Consensus 525 ldp~slfdvq~kR~he----YKRq~Lnil~ii~~y~~i~~~p~~~~~P~~-~IFaGKAaP~y~~aK~iIklI~~va~~in 599 (798)
T PRK14985 525 INPQAIFDVQIKRLHE----YKRQHLNLLHILALYKEIRENPQADRVPRV-FLFGAKAAPGYYLAKNIIFAINKVAEVIN 599 (798)
T ss_pred cCchhcchhhHhhhhh----hhhhhhHhhhhHHHHHHHHhCCCcCCCCeE-EEEeecCCCCcHHHHHHHHHHHHHHHHhc
Confidence 5566777777777644 366666 66666555433211000002356 468998554432 33333333322 1
Q ss_pred -C---CC--cEEEcC-Cc-ccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCCCchhhhcc--CCeEEEE
Q 001781 481 -L---EH--SVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIFF 550 (1013)
Q Consensus 481 -~---dg--~V~FlG-~~-eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvgGi~EiI~d--G~~G~Lv 550 (1013)
. .+ +|.|+. +. .-...++.+|||-...|...-|..|..=+-+|.-|.+.|++--|...|+.++ ++|||++
T Consensus 600 ~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~f 679 (798)
T PRK14985 600 NDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIF 679 (798)
T ss_pred CChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEe
Confidence 0 01 477877 32 4456789999999998876555889999999999999999999999998876 6899999
Q ss_pred cCCCHHHHHH
Q 001781 551 QKDNPEGLSR 560 (1013)
Q Consensus 551 ~p~D~eeLAe 560 (1013)
-. +.++..+
T Consensus 680 G~-~~~ev~~ 688 (798)
T PRK14985 680 GH-TVEQVKA 688 (798)
T ss_pred CC-CHHHHHH
Confidence 63 4555444
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=87.02 E-value=6.8 Score=47.33 Aligned_cols=86 Identities=14% Similarity=0.078 Sum_probs=53.3
Q ss_pred HHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEcCCC----Cchhhh-ccCCeEEEEc------CCCHHHHHHHHH
Q 001781 495 NGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFP----IIKEYV-AEGAQVIFFQ------KDNPEGLSRAFS 563 (1013)
Q Consensus 495 ~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIASdvg----Gi~EiI-~dG~~G~Lv~------p~D~eeLAeAI~ 563 (1013)
..+|+...+..+-++-. -++++||+++|+|+|+-..- .....+ +.-..|+-+. .-+.++++++|.
T Consensus 346 ~~vL~h~~vg~fvtH~G----wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~ 421 (470)
T PLN03015 346 VEILSHRSIGGFLSHCG----WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVR 421 (470)
T ss_pred HHHhccCccCeEEecCC----chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHH
Confidence 34667777766655532 35899999999999986532 233333 3334555552 136789999999
Q ss_pred HHHhC--c---ccHHHHHHHHHHHHH
Q 001781 564 LFISN--G---KLSKFARTVASAGRL 584 (1013)
Q Consensus 564 ~LL~d--~---elR~~~~~Mg~aARe 584 (1013)
+++.. + +.|+..+++++.+++
T Consensus 422 ~lm~~~~eeg~~~R~ra~~lk~~a~~ 447 (470)
T PLN03015 422 KIVAEEDEEGQKIRAKAEEVRVSSER 447 (470)
T ss_pred HHHccCcccHHHHHHHHHHHHHHHHH
Confidence 99952 1 223344455555555
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=86.25 E-value=3.6 Score=45.43 Aligned_cols=86 Identities=17% Similarity=0.100 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHc-CCCCCcEEEcCCcccHHHHHHHccEEEEcc
Q 001781 430 YAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRL-GLLEHSVRHYGFNGDVNGVLLMADIVLYGS 508 (1013)
Q Consensus 430 ~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eL-gL~dg~V~FlG~~eDl~~lLaaADIfVlPS 508 (1013)
...+++.+..+.+.. |+.+ | ++=..|......-.....++ +.. ++.+....-++..++..||.++.-+
T Consensus 139 ~~~~~~~l~~~~~~~-------p~~~-l-vvK~HP~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Ll~~s~~Vvtin 207 (269)
T PF05159_consen 139 QADFLDMLESFAKEN-------PDAK-L-VVKPHPDERGGNKYSYLEELPNLP--NVVIIDDDVNLYELLEQSDAVVTIN 207 (269)
T ss_pred HhHHHHHHHHHHHHC-------CCCE-E-EEEECchhhCCCChhHhhhhhcCC--CeEEECCCCCHHHHHHhCCEEEEEC
Confidence 444555555554432 5677 3 45555521000001222222 333 5667666668999999999998765
Q ss_pred CCCCCCccHHHHHHHHhCCCEEEcC
Q 001781 509 SQVEQGFPSLIVRAMTFGIPVITPD 533 (1013)
Q Consensus 509 ~~EEEGFGivVLEAMA~G~PVIASd 533 (1013)
. .+-+|||.+|+|||+.-
T Consensus 208 S-------tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 208 S-------TVGLEALLHGKPVIVFG 225 (269)
T ss_pred C-------HHHHHHHHcCCceEEec
Confidence 3 48999999999999843
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=85.41 E-value=9.4 Score=43.32 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=65.4
Q ss_pred HHHHHHHcCCCC-CcEEEEEEccC-CCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHH
Q 001781 398 KYQLRKENGFLK-DEIVVVVVGSS-FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVA 475 (1013)
Q Consensus 398 ~~~~R~~lgi~~-d~~vIL~VGRl-~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela 475 (1013)
...+...++++. +..+++..|.- .+.+ ....+...+.++.+.+ .+.++ ++.|...+. +..+++.
T Consensus 161 ~~~~~~~~~~~~~~~~i~i~pga~~~~~K--~Wp~e~~~~li~~l~~---------~~~~i-vl~G~~~e~--~~~~~i~ 226 (334)
T TIGR02195 161 QAAALAKFGLDTERPIIAFCPGAEFGPAK--RWPHEHYAELAKRLID---------QGYQV-VLFGSAKDH--PAGNEIE 226 (334)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCCCCccC--CCCHHHHHHHHHHHHH---------CCCEE-EEEEChhhH--HHHHHHH
Confidence 344556667664 45566666652 2322 3444555555544432 13564 455655443 4455555
Q ss_pred HHcCCCCCcEEEcC--CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEc
Q 001781 476 SRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1013)
Q Consensus 476 ~eLgL~dg~V~FlG--~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIAS 532 (1013)
+.. ++..+.+.| ...++..+++.||++|-.-. ..+-=|.|+|+|+|+-
T Consensus 227 ~~~--~~~~~~l~g~~sL~el~ali~~a~l~I~~DS-------Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 227 ALL--PGELRNLAGETSLDEAVDLIALAKAVVTNDS-------GLMHVAAALNRPLVAL 276 (334)
T ss_pred HhC--CcccccCCCCCCHHHHHHHHHhCCEEEeeCC-------HHHHHHHHcCCCEEEE
Confidence 432 221344667 44789999999999987742 2456688999999973
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=83.63 E-value=7 Score=43.15 Aligned_cols=99 Identities=24% Similarity=0.294 Sum_probs=58.1
Q ss_pred EEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC--
Q 001781 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG-- 489 (1013)
Q Consensus 412 ~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG-- 489 (1013)
.+++..|.-.+ ......+...+.+..+.++ +++++ ++|...+. +..+++.+.++-.. .+.+.|
T Consensus 123 ~i~i~~~~~~~--~k~w~~~~~~~l~~~l~~~---------~~~iv-l~g~~~e~--~~~~~i~~~~~~~~-~~~~~~~~ 187 (279)
T cd03789 123 VVVLPPGASGP--AKRWPAERFAALADRLLAR---------GARVV-LTGGPAER--ELAEEIAAALGGPR-VVNLAGKT 187 (279)
T ss_pred EEEECCCCCCc--cccCCHHHHHHHHHHHHHC---------CCEEE-EEechhhH--HHHHHHHHhcCCCc-cccCcCCC
Confidence 34555554322 1134455555555555322 46744 55654443 55566665543222 455666
Q ss_pred CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEc
Q 001781 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1013)
Q Consensus 490 ~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIAS 532 (1013)
...++..+++.||++|-+.. | .+--|.++|+|+|+-
T Consensus 188 ~l~e~~~li~~~~l~I~~Ds------g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 188 SLRELAALLARADLVVTNDS------G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CHHHHHHHHHhCCEEEeeCC------H-HHHHHHHcCCCEEEE
Confidence 34788999999999998742 2 345557999999974
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=81.74 E-value=5.7 Score=37.33 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=52.8
Q ss_pred EEEEcCCCcccHHHHHHHHHHcCCCCCcEEE---cCCc-cc--HHHHHHHccEEEEccCCCCCCc---cHHHHHHHHhCC
Q 001781 457 VFLCGNSTDGYNDALQEVASRLGLLEHSVRH---YGFN-GD--VNGVLLMADIVLYGSSQVEQGF---PSLIVRAMTFGI 527 (1013)
Q Consensus 457 LVIvG~G~e~Y~e~Lkela~eLgL~dg~V~F---lG~~-eD--l~~lLaaADIfVlPS~~EEEGF---GivVLEAMA~G~ 527 (1013)
|+|.|.... ...+++.+++.|.. .+.+ -|.. .. ++..+..||++|++..+- +- -.+--+|-..|+
T Consensus 3 liVGG~~~~--~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~v--sH~~~~~vk~~akk~~i 76 (97)
T PF10087_consen 3 LIVGGREDR--ERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYV--SHNAMWKVKKAAKKYGI 76 (97)
T ss_pred EEEcCCccc--HHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCc--ChHHHHHHHHHHHHcCC
Confidence 444443443 48999999999987 4555 1222 23 788999999999887543 22 233446778899
Q ss_pred CEEEcCCCCchhhh
Q 001781 528 PVITPDFPIIKEYV 541 (1013)
Q Consensus 528 PVIASdvgGi~EiI 541 (1013)
|++.++..++..+.
T Consensus 77 p~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 77 PIIYSRSRGVSSLE 90 (97)
T ss_pred cEEEECCCCHHHHH
Confidence 99999877765543
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=80.40 E-value=13 Score=42.75 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=59.7
Q ss_pred CcEEEEEEccCCCcCccccCHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEcCCCcccHHHHHHHHHHcCCCCCcEEEcC
Q 001781 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1013)
Q Consensus 410 d~~vIL~VGRl~~yk~~~Kg~dlLLeAfa~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkela~eLgL~dg~V~FlG 489 (1013)
+..+++..|.-.+.+ ..-.+...+.++.+.+ .+++++++.|.+... .+..+++++...-.. .+.+.|
T Consensus 183 ~~~i~i~pga~~~~K--~Wp~e~fa~l~~~L~~---------~~~~vvl~ggp~e~e-~~~~~~i~~~~~~~~-~~~l~g 249 (352)
T PRK10422 183 QNYVVIQPTARQIFK--CWDNDKFSAVIDALQA---------RGYEVVLTSGPDKDD-LACVNEIAQGCQTPP-VTALAG 249 (352)
T ss_pred CCeEEEecCCCcccc--CCCHHHHHHHHHHHHH---------CCCeEEEEcCCChHH-HHHHHHHHHhcCCCc-cccccC
Confidence 456777777643322 2344455555544421 245644344444322 233455555333232 355677
Q ss_pred --CcccHHHHHHHccEEEEccCCCCCCccHHHHHHHHhCCCEEEc
Q 001781 490 --FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1013)
Q Consensus 490 --~~eDl~~lLaaADIfVlPS~~EEEGFGivVLEAMA~G~PVIAS 532 (1013)
...++..+++.||++|-.-. ..+-=|.|+|+|+|+-
T Consensus 250 ~~sL~el~ali~~a~l~v~nDS-------Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 KTTFPELGALIDHAQLFIGVDS-------APAHIAAAVNTPLICL 287 (352)
T ss_pred CCCHHHHHHHHHhCCEEEecCC-------HHHHHHHHcCCCEEEE
Confidence 45789999999999987632 2456678999999974
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 79.1 bits (194), Expect = 4e-15
Identities = 91/734 (12%), Positives = 195/734 (26%), Gaps = 252/734 (34%)
Query: 228 ILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLI 287
I+ + S +L L + + Q+ ++ + Y
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQE-----EMVQKFVEEVL--------------RINY--- 91
Query: 288 DWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYW 347
+ + ++ ++ S+M + Q D L N
Sbjct: 92 KF------LMSPIKTEQRQPSMMTRMYIE-------QRDRLYN----------------- 121
Query: 348 KSVFSRVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEK-YQLRKEN- 405
+ VF Y +V ++ Y K + +LR
Sbjct: 122 -------DNQVFAKY----------------------NVSRLQPYLKLRQALLELRPAKN 152
Query: 406 -------GFLKDEIVVVVVGS----SFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSF 454
G K + + V S ++ W + NS E
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW-------------LNLKNCNSPETVL 199
Query: 455 KFVF-LCGNSTDGYN---DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQ 510
+ + L + D + R+ ++ +R + LL+ V
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK-- 257
Query: 511 VEQGFPSLIVRAMTFG--IPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSR--AFSLF- 565
A I + T + ++++ + L+ SL
Sbjct: 258 --------AWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 566 ----ISNGKLSKFART-----VASAGRL------HAKNMLALDCVTRYARILENVLNFPS 610
L + T ++ N ++C + I+E+ LN
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC-DKLTTIIESSLN--- 364
Query: 611 DALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEFTKN 670
L P ++ +++ ++F + +L++ W S VV+ L +
Sbjct: 365 -VLEP---AEYRKMFDRLSVFPPSAHI-PTILLSL-IWFDVIKSDVMVVVNKLH---KYS 415
Query: 671 ITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASWDDIYRNARKS 730
+ E + + TIS + I + + L + D Y +
Sbjct: 416 LVE---KQPKESTIS------IPSIYLELKVKLENEYALHRSI-------VDHYNIPKTF 459
Query: 731 ERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFL-HHGSLYRGLALSSAARRLRSDD 789
+ D+ Y YS + HH L + +
Sbjct: 460 DSDDLIPPYLDQ------------Y-FYS------HIGHH--------LKNIE---HPER 489
Query: 790 VDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAE 849
+ + + +R F + K+ R S + +A
Sbjct: 490 MTLFRMV----FLDFR---------F-LEQKI------------------RHDSTAWNAS 517
Query: 850 KVLEETVQETEGDVMYFWAHL-DMDGGFTRNNNDVLTFWSMC--DILNGGHCR------- 899
+ T+Q + ++ ++ D D + R N +L F +++ +
Sbjct: 518 GSILNTLQ----QLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM 573
Query: 900 ----TAFEDAFRQM 909
FE+A +Q+
Sbjct: 574 AEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 8e-07
Identities = 96/717 (13%), Positives = 193/717 (26%), Gaps = 237/717 (33%)
Query: 5 NTMYRKYIKIVR--MPD---DFGFRIVPVVTRTGSKAGLLKSTGCNE---EKHNGSGS-- 54
+Y I+ +F + V + + +L + K SG+
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPK-----SILSKEEIDHIIMSKDAVSGTLR 66
Query: 55 ------NSPRT-------DSDDDNAAAAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQD 101
+ + N + +Q+ P + + +R+ + +
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK---TEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 102 KTQTKPSLHR---YLLRHRHVNSTPSAANAATSGPRFNRKGF--SSL------------- 143
+ K ++ R YL + + A N G G + +
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV----LGSGKTWVALDVCLSYKVQCK 179
Query: 144 FPFRGAYLLYF---------MIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGS 194
F + L + L + + S S R I+ ELR
Sbjct: 180 MDF-KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR--- 235
Query: 195 RLKFVPDQVGFGNGLDGLR--STPR----FGV--------RPPRIGLILGNMAKDSRSLL 240
RL + N L L + F + R ++ L A + +
Sbjct: 236 RLLKSKP---YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS--AATTTHIS 290
Query: 241 LITVVKNL---QKLGYVFKIYAVRSGNSHSLWEQIAG----QISILGQ---------EQY 284
L L + + K R L ++ ++SI+ + + +
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 285 SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLL 344
++ II SL E + ++ F L + + +P + L
Sbjct: 348 KHVNCDKLTTIIESSLNVLE--PAEYRKMFDR--LS-VFPPSA---HIPTIL------LS 393
Query: 345 SYW-KSVFSRVNVIV--FPDYTL------PMLYSVLDAGNFFVIPGSPADVWAVEAYSKS 395
W + S V V+V Y+L S+ + + + +A+
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--YLELKVKLENEYAL------ 445
Query: 396 H----EKYQLRKE---NGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRN 448
H + Y + K + + + +FY+ + + H +K
Sbjct: 446 HRSIVDHYNIPKTFDSDDLIPPYL------DQYFYSHIG--H----H------LKNIEHP 487
Query: 449 SVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLL--MADIVLY 506
F+ VFL D LE +RH + +G +L + + Y
Sbjct: 488 ERMTLFRMVFL---------D--------FRFLEQKIRHDSTAWNASGSILNTLQQLKFY 530
Query: 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFI 566
K Y+ + E L A F+
Sbjct: 531 -------------------------------KPYICD-------NDPKYERLVNAILDFL 552
Query: 567 SNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGPISQLQQ 623
+N++ ++Y +L L +A+ Q+Q+
Sbjct: 553 PK----------------IEENLI----CSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 4e-11
Identities = 42/216 (19%), Positives = 82/216 (37%), Gaps = 24/216 (11%)
Query: 394 KSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGS 453
+ QL+KE G + E +++ + + V +++ + E
Sbjct: 194 FKRDMTQLKKEYGISESEKILIHISN------FRKVKRV------QDVVQAFAKIVTEVD 241
Query: 454 FKFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512
K + L G DG + ++ L + E V G +V +L M+D++L S+ E
Sbjct: 242 AKLL-LVG---DGPEFCTILQLVKNLHI-EDRVLFLGKQDNVAELLAMSDLMLL-LSEKE 295
Query: 513 QGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLS 572
F +++ AM G+P I I E + G + + G++ + + +L
Sbjct: 296 -SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEEL- 353
Query: 573 KFARTVASAGRLHAKNMLALD-CVTRYARILENVLN 607
R + R + V++Y I +VL
Sbjct: 354 --HRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 46/240 (19%), Positives = 96/240 (40%), Gaps = 26/240 (10%)
Query: 371 LDAGNFFVIP-GSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWD 429
+ F ++P G D E + + R++NG + + +++ VGS F + D
Sbjct: 157 TEPERFQILPPGIYPDRKYSEQ--IPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGV--D 212
Query: 430 YAV-AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHY 488
++ A+ L + R N +F+ G + +A +LG+ +V +
Sbjct: 213 RSIEAL----ASLPESLRHN------TLLFVVG---QDKPRKFEALAEKLGV-RSNVHFF 258
Query: 489 GFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQ-V 547
DV+ ++ AD++L+ + E +++ A+T G+PV+T Y+A+
Sbjct: 259 SGRNDVSELMAAADLLLH-PAYQE-AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGT 316
Query: 548 IFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLN 607
+ + + E L+ ++ L A R +A + A I+ L+
Sbjct: 317 VIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARHYADTQDLYSLPEKAADIITGGLD 373
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 2e-06
Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 469 DALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADI-VLYGSSQVEQGFPSLIVRAMTFGI 527
++ +A +LG+ + N ++ +L + V ++ VE + A++ GI
Sbjct: 45 KKIKLLAQKLGV-KAEFGFVNSN-ELLEILKTCTLYVH--AANVE-SEAIACLEAISVGI 99
Query: 528 PVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK 587
+ + P+ + F+ +N + LS ++ N + + A
Sbjct: 100 VPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLE---RERMQNEYAKSAL 156
Query: 588 N 588
N
Sbjct: 157 N 157
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-06
Identities = 39/300 (13%), Positives = 93/300 (31%), Gaps = 42/300 (14%)
Query: 317 IPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNF 376
P +W D + R F L + + R + P+Y P L D
Sbjct: 148 SPWLWRCHIDLSSP------NREFWEFLRRFVEKYDRY-IFHLPEYVQPEL----DRNKA 196
Query: 377 FVIP-GSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMH 435
++P ++ + + ++ ++ V +
Sbjct: 197 VIMPPSIDPLSEKNVELKQTEILR-ILERFDVDPEKPIITQVSR------FDPWKGI--- 246
Query: 436 DVGPLLIK-YARRNSVEGSFKFVFLCGNSTDG------YNDALQEVASRLGLLEHSVRHY 488
+I+ Y + + + + + D + L+++ +
Sbjct: 247 ---FDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVL-TNLI 302
Query: 489 GFNG-DVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQV 547
G + +VN +D++L S + +GF + AM G PVI IK + +G
Sbjct: 303 GVHAREVNAFQRASDVILQMS--IREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETG 360
Query: 548 IFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALD-CVTRYARILENVL 606
+ + + ++ ++ + + + + + + RY IL ++
Sbjct: 361 FLV--RDANEAVEVVLYLLKHPEV---SKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 17/158 (10%)
Query: 469 DALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVL------YGSSQVEQGFPSLIV 520
L+ +A+ + +V+ G D+ L ADI G VE G + +
Sbjct: 242 STLRRLATDVS---QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE-GLGIVYL 297
Query: 521 RAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVAS 580
A G+PVI E V ++ D + LS + + + +
Sbjct: 298 EAQACGVPVIAGTSGGAPETVTPATGLVVEGSD-VDKLSELLIELLDDPIR---RAAMGA 353
Query: 581 AGRLHAKNMLALDCVT-RYARILENVLNFPSDALLPGP 617
AGR H + + + + R IL++ + AL
Sbjct: 354 AGRAHVEAEWSWEIMGERLTNILQSEPRKLAAALEHHH 391
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 6e-04
Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%)
Query: 481 LEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIK 538
+ G D +L + I + +P L FG+ VIT + K
Sbjct: 293 KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPL--EMAHFGLRVITNKYE-NK 349
Query: 539 EYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRY 598
+ + ++ ++ NPE ++ + + +S + +
Sbjct: 350 DLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEI 409
Query: 599 ARIL 602
L
Sbjct: 410 EEKL 413
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1013 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-05 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 2e-04 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 9e-04 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 44.4 bits (103), Expect = 5e-05
Identities = 38/322 (11%), Positives = 84/322 (26%), Gaps = 28/322 (8%)
Query: 305 AISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTL 364
+ + + + IP V+ I + + Y + L+ + + D
Sbjct: 132 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVT 191
Query: 365 PMLYSVLD---------AGNFFVIP-GSPADVWAVEAYSKSHE--KYQLRKENGFLKDEI 412
+ L G + G W + S + K L + G +
Sbjct: 192 TVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVT 251
Query: 413 VVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQ 472
+ + + LL +S + + F+ D +
Sbjct: 252 FMFIGRFDRGQKGVDV-----------LLKAIEILSSKKEFQEMRFIIIGKGDPELEGWA 300
Query: 473 EVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532
+ V + D V+ S + F + + AM G I
Sbjct: 301 RSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIAS 358
Query: 533 DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLAL 592
+++ + I + +P L+ A + + + A +
Sbjct: 359 AVGGLRDIITNETG-ILVKAGDPGELANAILKALELSR--SDLSKFRENCKKRAMSFSWE 415
Query: 593 DCVTRYARILENVLNFPSDALL 614
RY + ++ D +L
Sbjct: 416 KSAERYVKAYTGSIDRAFDFIL 437
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 42.7 bits (99), Expect = 2e-04
Identities = 25/183 (13%), Positives = 49/183 (26%), Gaps = 15/183 (8%)
Query: 434 MHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGD 493
G L+ A V + V + G AL ASR V +
Sbjct: 301 TWQKGIDLMAEAVDEIVSLGGRLV-VLGAGDVALEGALLAAASRHHG---RVGVAIGYNE 356
Query: 494 VNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQV------ 547
L+ A + + A+ +G + + + V +
Sbjct: 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKA 416
Query: 548 ---IFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILEN 604
+ F +GL +A + K + G ++ YA +
Sbjct: 417 ATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQ 474
Query: 605 VLN 607
+++
Sbjct: 475 LIS 477
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 40.3 bits (92), Expect = 9e-04
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 519 IVRAMTFGIPVITPDFPIIKEYVAEG-AQVIFFQKDNPEGLSRAFSLFISNGKLSKFART 577
++ A+T G+PV+T Y+A+ + + + E L+ ++ L
Sbjct: 286 LLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMA 342
Query: 578 VASAGRLHAKNMLALDCVTRYARILE 603
A R +A + A I+
Sbjct: 343 WAENARHYADTQDLYSLPEKAADIIT 368
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1013 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.93 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.91 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.84 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.16 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 99.08 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.98 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.82 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.8 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.57 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.11 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.89 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 97.7 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 97.55 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.05 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.04 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 96.18 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 94.84 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 94.16 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5.6e-38 Score=286.07 Aligned_cols=349 Identities=11% Similarity=0.070 Sum_probs=241.8
Q ss_pred CEEEEEECCCCC----CCCEEHHHHHHHHHHHCCCEEEEEECCC--------------------CC--------------
Q ss_conf 979999645689----9841028999999998798899998189--------------------98--------------
Q 001781 223 PRIGLILGNMAK----DSRSLLLITVVKNLQKLGYVFKIYAVRS--------------------GN-------------- 264 (1013)
Q Consensus 223 ~RIalI~g~l~~----gg~~l~ll~Lak~L~e~GyeV~Vls~~~--------------------g~-------------- 264 (1013)
+||++|...+.| ||...++..|+++|+++||+|.|++... +.
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEEECCCCCEEEEEEEEECCEEE
T ss_conf 98999977220633267689999999999997699699996698534465256658999714678547899999899159
Q ss_pred -----------------------CHHHHHHHH----HHHHHH----HHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf -----------------------357999999----999998----4249639999375448999999998521014689
Q 001781 265 -----------------------SHSLWEQIA----GQISIL----GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEP 313 (1013)
Q Consensus 265 -----------------------~~~~~k~l~----~LiklL----k~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep 313 (1013)
....+..+. ...+++ ..++|||||.|.+...+..........
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~------- 153 (477)
T d1rzua_ 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAET------- 153 (477)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSS-------
T ss_pred EEECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHC-------
T ss_conf 9955824304678735576665665218899999988776653025688888799336067788999998547-------
Q ss_pred CCCCCEEEEECCCCCCCCC--------CH----HHHHH--HHHHHHHHHHHHCCCCEEEECCCCCHHH------------
Q ss_conf 9998599998298411465--------21----23455--9989999999740254999748970332------------
Q 001781 314 FHSIPLVWIIQEDSLANRL--------PV----YVERG--FQNLLSYWKSVFSRVNVIVFPDYTLPML------------ 367 (1013)
Q Consensus 314 ~~~IPVI~tiHg~~l~~~~--------~~----y~~~~--l~klLsk~~~~l~~AD~VI~~s~~~~~l------------ 367 (1013)
.++|+|+++|+....... .. +.... ....+...+.....+|.+++.+......
T Consensus 154 -~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~ 232 (477)
T d1rzua_ 154 -PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEG 232 (477)
T ss_dssp -CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHH
T ss_pred -CCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
T ss_conf -8988899983244234678889988621144406544343205689998877644421311999999998754753665
Q ss_pred HCCCCCCCEEEECCCCCCCCCCCCCCCC------------------HHHHHHHHHCCCCC-CCEEEEEECCCCCCCCCCC
Q ss_conf 1168999889938999783100013762------------------46799999709999-9689999824777576656
Q 001781 368 YSVLDAGNFFVIPGSPADVWAVEAYSKS------------------HEKYQLRKENGFLK-DEIVVVVVGSSFFYNELSW 428 (1013)
Q Consensus 368 y~~l~~~ki~VIPnggVDl~~~~~F~p~------------------~~~~~lR~~lgi~~-d~~vIL~VGRl~~yk~~~K 428 (1013)
.......++.+|+|+ +|. +.|.|. .....++...++++ +.++|+++||+.+ +|
T Consensus 233 ~~~~~~~~~~vi~ng-v~~---~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~----~K 304 (477)
T d1rzua_ 233 VIGSRAHVLHGIVNG-IDA---DVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTW----QK 304 (477)
T ss_dssp HHHTTGGGEEECCCC-BCT---TTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBST----TT
T ss_pred HHHHCCCCEEEEECC-CCH---HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE----CC
T ss_conf 666515647999789-340---1205664533333310456777666389988741446678638999850021----58
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCC--CCHHHHHHHCCEEEE
Q ss_conf 899999999998999842056889909999982899652899999999909999709995880--109999977367899
Q 001781 429 DYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN--GDVNGVLLMADIVLY 506 (1013)
Q Consensus 429 g~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~~--eDi~~lLaaADIfVl 506 (1013)
|++++++|+..+.+. +.+ ++++|.|+..+...+++++. ++.+ +|.+.+.. +++..+|+.||++|+
T Consensus 305 G~~~Ll~a~~~~~~~---------~~~-l~~~G~G~~~~~~~~~~~~~--~~~~-~v~~~~~~~~~~~~~~~~~aD~~v~ 371 (477)
T d1rzua_ 305 GIDLMAEAVDEIVSL---------GGR-LVVLGAGDVALEGALLAAAS--RHHG-RVGVAIGYNEPLSHLMQAGCDAIII 371 (477)
T ss_dssp THHHHHTTHHHHHHT---------TCE-EEEEECBCHHHHHHHHHHHH--HTTT-TEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred CCHHHHHHHHHHHHH---------CCE-EEEEECCCCHHHHHHHHHHH--HCCC-EEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 837999999987865---------983-99993677457789999876--3587-2789715470579999983851348
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCC---------EEEEECCCCHHHHHHHHHHHHH---CCCCHHH
Q ss_conf 257887896389999999199899839887023121598---------4999948999999999999995---9610799
Q 001781 507 GSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA---------QVIFFQKDNPEGLSRAFSLFIS---NGKLSKF 574 (1013)
Q Consensus 507 PS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~---------tGlLv~p~D~eeLAeAI~~LL~---d~elR~~ 574 (1013)
||.+| +||++++|||+||+|||+|++||++|+|.|+. +|++|++.|+++++++|.++++ ++++
T Consensus 372 PS~~E--~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~--- 446 (477)
T d1rzua_ 372 PSRFE--PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKL--- 446 (477)
T ss_dssp CCSCC--SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHH---
T ss_pred CCCCC--CCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHH---
T ss_conf 86535--7888999999839989990799974055248755334678744896999999999999999860079999---
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999960699999999999999755
Q 001781 575 ARTVASAGRLHAKNMLALDCVTRYARILENVLN 607 (1013)
Q Consensus 575 ~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL~ 607 (1013)
+++|++++. .++|+|++++++|.++|+++++
T Consensus 447 ~~~~~~~a~--~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 447 WTQMQKLGM--KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHH--TCCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHC
T ss_conf 999999999--8518999999999999999849
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=3.2e-34 Score=259.19 Aligned_cols=357 Identities=12% Similarity=0.090 Sum_probs=252.7
Q ss_pred CEEEEEECCCCC---CCCEEHHHHHHHHHHHCCCEEEEEECCCCC-----------------------------------
Q ss_conf 979999645689---984102899999999879889999818998-----------------------------------
Q 001781 223 PRIGLILGNMAK---DSRSLLLITVVKNLQKLGYVFKIYAVRSGN----------------------------------- 264 (1013)
Q Consensus 223 ~RIalI~g~l~~---gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~----------------------------------- 264 (1013)
+||+++...+.| ||.+.++..|+++|.+.||+|.+++.....
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG 80 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEES
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCEEECCCCCCEEEEEECCCCEEEEECCC
T ss_conf 98799877458845587999999999999976998999905898655444154022154420112332258817996175
Q ss_pred --------CHHHHHH------------HHHHHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf --------3579999------------9999999842-496399993754489999999985210146899998599998
Q 001781 265 --------SHSLWEQ------------IAGQISILGQ-EQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWII 323 (1013)
Q Consensus 265 --------~~~~~k~------------l~~LiklLk~-~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~ti 323 (1013)
....+.. ...+..+++. ..||+||+|.+...+++.+..+.. ++|+|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~----------~~~~v~~~ 150 (437)
T d2bisa1 81 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYF----------KIPAVFTI 150 (437)
T ss_dssp SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHH----------CCCEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCC----------CCCEEEEE
T ss_conf 43454112553114689999998999999899998408999789989704666765430134----------67625899
Q ss_pred CCCCCCCCCCHHH----HHHHH--HHHHHHHHHHCCCCEEEECCCCCHHH---HCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 2984114652123----45599--89999999740254999748970332---116899988993899978310001376
Q 001781 324 QEDSLANRLPVYV----ERGFQ--NLLSYWKSVFSRVNVIVFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSK 394 (1013)
Q Consensus 324 Hg~~l~~~~~~y~----~~~l~--klLsk~~~~l~~AD~VI~~s~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p 394 (1013)
|+........... ..... ............+|.+++.+...... +......++.+|||+ +|. +.|.+
T Consensus 151 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g-~d~---~~~~~ 226 (437)
T d2bisa1 151 HRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG-IDC---SFWNE 226 (437)
T ss_dssp SSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCC-CCT---TTSCG
T ss_pred EECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECC-CCC---CCCCC
T ss_conf 62144555123321012013456778899988887652211110245666666513456751897046-544---34332
Q ss_pred C-------HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
Q ss_conf 2-------467999997099999689999824777576656899999999998999842056889909999982899652
Q 001781 395 S-------HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGY 467 (1013)
Q Consensus 395 ~-------~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y 467 (1013)
. .....++.+++..+ +++|+++||+.. . .||.+.+++|+..+.... ..++++ ++++|.++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~--~-~Kg~~~ll~a~~~~~~~~-----~~~~~~-lvi~G~~~~~~ 296 (437)
T d2bisa1 227 SYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDR--G-QKGVDVLLKAIEILSSKK-----EFQEMR-FIIIGKGDPEL 296 (437)
T ss_dssp GGCCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCS--S-SSCHHHHHHHHHHHTTSG-----GGGGEE-EEEECCBCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCC--C-CHHHHHHHHHHCCCCCCC-----CCCCCE-EEEECCCCCCC
T ss_conf 2220105888876545540267-866987303566--5-125899986410233233-----333211-45310223333
Q ss_pred HHHHHHHHHHCCCCCCCEEECC--CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCC
Q ss_conf 8999999999099997099958--80109999977367899257887896389999999199899839887023121598
Q 001781 468 NDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGA 545 (1013)
Q Consensus 468 ~e~LkelakeLgL~dg~V~FlG--~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~ 545 (1013)
...++.+.+ ...+ .+.+.| +.+++..+|+.||++++||..| ++|++++|||+||+|||+++.|+..|++.+ .
T Consensus 297 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~adi~v~~s~~e--~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~ 370 (437)
T d2bisa1 297 EGWARSLEE--KHGN-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITN-E 370 (437)
T ss_dssp HHHHHHHHH--TCTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHTTTCEEEEESCTTHHHHCCT-T
T ss_pred CCCHHHHCC--CCCC-CEECCCCCCHHHHHHHHHHHCCCCCCCCCC--CCCHHHHHHHHCCCCEEEECCCCCHHHEEC-C
T ss_conf 210022102--3210-000234576888999876422354446555--642689999987998999389980773778-9
Q ss_pred EEEEECCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 4999948999999999999995-961079999999999999996069999999999999975599998
Q 001781 546 QVIFFQKDNPEGLSRAFSLFIS-NGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDA 612 (1013)
Q Consensus 546 tGlLv~p~D~eeLAeAI~~LL~-d~elR~~~~~Mg~aARe~ae~fsse~~i~~y~~Lye~iL~~pse~ 612 (1013)
+|+++++.|+++++++|.++++ +++. +++|++++++.+++|+|++++++|.++|+.+++...++
T Consensus 371 ~G~~~~~~d~~~la~~i~~ll~~~~~~---~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~~~~ 435 (437)
T d2bisa1 371 TGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDF 435 (437)
T ss_dssp TCEEECTTCHHHHHHHHHHHHTTTTSC---THHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCBCTT
T ss_pred CEEEECCCCHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 589977999999999999998379999---99999999999996999999999999999999867544
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-35 Score=268.93 Aligned_cols=333 Identities=13% Similarity=0.110 Sum_probs=239.1
Q ss_pred EEEEECCCCC-CCCEEHHHHHHHHHHHCCCEEEEEECCCC---C------------CHH---HHHHHHHHHHHHHHCCCC
Q ss_conf 9999645689-98410289999999987988999981899---8------------357---999999999998424963
Q 001781 225 IGLILGNMAK-DSRSLLLITVVKNLQKLGYVFKIYAVRSG---N------------SHS---LWEQIAGQISILGQEQYS 285 (1013)
Q Consensus 225 IalI~g~l~~-gg~~l~ll~Lak~L~e~GyeV~Vls~~~g---~------------~~~---~~k~l~~LiklLk~~kpD 285 (1013)
|+|++..+.+ ||.+..+..+++.|.+.||+|.+++.... + ... .......+...++...+|
T Consensus 2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 81 (370)
T d2iw1a1 2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPAD 81 (370)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 89991488999989999999999999779979999567877888863899867655443011588999999999861655
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC-----CHHHHH---HHHHHHHHHHHHHCCCCEE
Q ss_conf 99993754489999999985210146899998599998298411465-----212345---5998999999974025499
Q 001781 286 LIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRL-----PVYVER---GFQNLLSYWKSVFSRVNVI 357 (1013)
Q Consensus 286 IIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~-----~~y~~~---~l~klLsk~~~~l~~AD~V 357 (1013)
+|+.+.....+ .+.+ .+......+. ..+... .......+.......++.+
T Consensus 82 ~v~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (370)
T d2iw1a1 82 RVVGFNKMPGL---------------------DVYF-AADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKL 139 (370)
T ss_dssp EEEESSCCTTC---------------------SEEE-CCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEE
T ss_pred EEEECCCCCHH---------------------HHHH-HHHCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHHCCCCEE
T ss_conf 25310367237---------------------8998-7622441046630474200040000067889999742157469
Q ss_pred EECCCCCHHH---HCCCCCCCEEEECCCCCCCCCCCCCCC---CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHH
Q ss_conf 9748970332---116899988993899978310001376---2467999997099999689999824777576656899
Q 001781 358 VFPDYTLPML---YSVLDAGNFFVIPGSPADVWAVEAYSK---SHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYA 431 (1013)
Q Consensus 358 I~~s~~~~~l---y~~l~~~ki~VIPnggVDl~~~~~F~p---~~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~d 431 (1013)
++.+...... .......++.+|||+ ++. +.+.+ ...+..++..++++++.++++++||+.+ .||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~vi~~g-v~~---~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~----~Kg~~ 211 (370)
T d2iw1a1 140 MMLTDKQIADFQKHYQTEPERFQILPPG-IYP---DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFG----RKGVD 211 (370)
T ss_dssp EESCHHHHHHHHHHHCCCGGGEEECCCC-CCG---GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTT----TTTHH
T ss_pred EEECHHHHHHHHHHCCCCCCEEEEEEEE-CCC---CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCC----CCCHH
T ss_conf 9824799999998609996428999740-222---211246765666665430488866369999851455----42033
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCEEEECCCCC
Q ss_conf 99999999899984205688990999998289965289999999990999970999588010999997736789925788
Q 001781 432 VAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQV 511 (1013)
Q Consensus 432 lLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~~eDi~~lLaaADIfVlPS~~E 511 (1013)
.+++|++.+.++. ++..++ ++|.++.. +.++++++++++.+ +++|.|+.+++..+|+.||++++||..|
T Consensus 212 ~li~a~~~l~~~~-------~~~~~~-ii~g~~~~--~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~adv~v~ps~~E 280 (370)
T d2iw1a1 212 RSIEALASLPESL-------RHNTLL-FVVGQDKP--RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLHPAYQE 280 (370)
T ss_dssp HHHHHHHTSCHHH-------HHTEEE-EEESSSCC--HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEECCSCC
T ss_pred HHCCCCCCCCCCC-------CCCEEE-ECCCCCCC--CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 3201112332332-------210000-01122222--23222222222222-2222332334442223333444322223
Q ss_pred CCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEE-CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 789638999999919989983988702312159849999-4899999999999999596107999999999999999606
Q 001781 512 EQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFF-QKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML 590 (1013)
Q Consensus 512 EEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv-~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs 590 (1013)
+||++++|||+||+|||+++.+|.+|++.++.+|+++ ++.|+++++++|.++++|+++ +++|+++||++++++.
T Consensus 281 --~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~---~~~~~~~ar~~~~~~~ 355 (370)
T d2iw1a1 281 --AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL---RMAWAENARHYADTQD 355 (370)
T ss_dssp --SSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHSC
T ss_pred --CCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHHHHC
T ss_conf --43311332145770399938997188852798369986999999999999999769999---9999999999999828
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q 001781 591 ALDCVTRYARILE 603 (1013)
Q Consensus 591 se~~i~~y~~Lye 603 (1013)
+....+.+.++|+
T Consensus 356 ~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 356 LYSLPEKAADIIT 368 (370)
T ss_dssp CSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 5479999999984
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2.9e-23 Score=180.95 Aligned_cols=292 Identities=11% Similarity=0.040 Sum_probs=200.8
Q ss_pred HHHHHCCC-CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99842496-39999375448999999998521014689999859999829841146521234559989999999740254
Q 001781 277 SILGQEQY-SLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVN 355 (1013)
Q Consensus 277 klLk~~kp-DIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y~~~~l~klLsk~~~~l~~AD 355 (1013)
.+....++ |+|+.|.|+..++.....+.. ...++++..|........ ......... ....+-.+|
T Consensus 115 ~l~~~~~~~d~iwvhDyhl~llp~~lR~~~---------~~~~i~~flH~pfP~~~~-fr~lp~~~~----il~~ll~~d 180 (456)
T d1uqta_ 115 KLLPLLQDDDIIWIHDYHLLPFAHELRKRG---------VNNRIGFFLHIPFPTPEI-FNALPTYDT----LLEQLCDYD 180 (456)
T ss_dssp HHGGGCCTTCEEEEESGGGTTHHHHHHHTT---------CCSCEEEECCSCCCCHHH-HTTSTTHHH----HHHHHTTSS
T ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHHHC---------CCCCEEEEECCCCCCHHH-HCCCCCHHH----HHHHHHCCC
T ss_conf 998725689869995452555699999858---------998589996899998577-554850699----997763226
Q ss_pred EEEECCCCCHHHH------------------CCC-CCCCEEEECCCCCCCCCCCCCCCC------HHHHHHHHHCCCCCC
Q ss_conf 9997489703321------------------168-999889938999783100013762------467999997099999
Q 001781 356 VIVFPDYTLPMLY------------------SVL-DAGNFFVIPGSPADVWAVEAYSKS------HEKYQLRKENGFLKD 410 (1013)
Q Consensus 356 ~VI~~s~~~~~ly------------------~~l-~~~ki~VIPnggVDl~~~~~F~p~------~~~~~lR~~lgi~~d 410 (1013)
.+.+........+ ... ...++.++|.+ +|. +.|... .....++..+ .+
T Consensus 181 ~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~G-ID~---~~~~~~~~~~~~~~~~~l~~~~---~~ 253 (456)
T d1uqta_ 181 LLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIG-IEP---KEIAKQAAGPLPPKLAQLKAEL---KN 253 (456)
T ss_dssp EEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCC-CCH---HHHHHHHHSCCCHHHHHHHHHT---TT
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCC-CCC---HHHHHHCCCHHHHHHHHHHHHC---CC
T ss_conf 2003589999999999999738611268729956815530120676-562---6654311407799999977752---89
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC-------CHHHHHHHHHH------
Q ss_conf 68999982477757665689999999999899984205688990999998289965-------28999999999------
Q 001781 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG-------YNDALQEVASR------ 477 (1013)
Q Consensus 411 ~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~-------Y~e~Lkelake------ 477 (1013)
.++|+++||+.+ .||+..+++|+.++++++++.+. .+. ++++|.+... +..++.+++.+
T Consensus 254 ~~~il~V~Rld~----~KGi~~~l~A~~~~l~~~p~~~~---~v~-lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~ 325 (456)
T d1uqta_ 254 VQNIFSVERLDY----SKGLPERFLAYEALLEKYPQHHG---KIR-YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG 325 (456)
T ss_dssp CEEEEEECCBCG----GGCHHHHHHHHHHHHHHCGGGTT---TEE-EEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEECCCCH----HHCHHHHHHHHHHHHHHCCCCCC---CEE-EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 859999378743----20658999999999875843146---189-9997487534568899999999999999876521
Q ss_pred -CCCCCCCEEECC--CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCC-----EEECCCCCCHHHHCCCCEEEE
Q ss_conf -099997099958--801099999773678992578878963899999991998-----998398870231215984999
Q 001781 478 -LGLLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIP-----VITPDFPIIKEYVAEGAQVIF 549 (1013)
Q Consensus 478 -LgL~dg~V~FlG--~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlP-----VIASdvgGi~EiI~dG~tGlL 549 (1013)
.+..+ .+.+.+ ..+++..+|+.||+++.||..| |||++++|||+||+| +|+|+.+|..+.+.+ |++
T Consensus 326 ~~~~~~-~v~~~~~~~~~~l~a~~~~Adv~v~~s~~E--G~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~---g~l 399 (456)
T d1uqta_ 326 QLGWTP-LYYLNQHFDRKLLMKIFRYSDVGLVTPLRD--GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALI 399 (456)
T ss_dssp BTTBCS-EEEECSCCCHHHHHHHHHHCSEEEECCSSB--SCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT---SEE
T ss_pred CCCCCC-EEECCCCCCHHHHHHHHHHHCEEECCCCCC--CCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHCC---EEE
T ss_conf 279875-021158767888767775305452587657--88839999999089888975897289787788597---699
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 94899999999999999596107999999999999999606999999999999997
Q 001781 550 FQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENV 605 (1013)
Q Consensus 550 v~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fsse~~i~~y~~Lye~i 605 (1013)
++|.|++++|++|.++++++. ++++++.+++++.+.+++....++.+++-++++
T Consensus 400 VnP~d~~~~A~ai~~aL~~~~--~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 400 VNPYDRDEVAAALDRALTMSL--AERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp ECTTCHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred ECCCCHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 895999999999999974999--999999999989999789999999999998755
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.91 E-value=5e-23 Score=179.31 Aligned_cols=187 Identities=13% Similarity=0.102 Sum_probs=146.9
Q ss_pred CCCCCCCCCCCCC-------HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 9783100013762-------467999997099999689999824777576656899999999998999842056889909
Q 001781 383 PADVWAVEAYSKS-------HEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFK 455 (1013)
Q Consensus 383 gVDl~~~~~F~p~-------~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdik 455 (1013)
|||+ +.|.+. ..+..++++++++ ++++|+|+||+.. + +||++.+++|++.+..... .++++
T Consensus 1 gid~---~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~il~~Grl~~--~-~Kg~~~li~a~~~l~~~~~-----~~~~~ 68 (196)
T d2bfwa1 1 GIDC---SFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDR--G-QKGVDVLLKAIEILSSKKE-----FQEMR 68 (196)
T ss_dssp CCCT---TTSSGGGSCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCS--S-SSCHHHHHHHHHHHTTSGG-----GGGEE
T ss_pred CCCH---HHCCCCCCCCHHHHHHHHHHHHHCCC-CCCEEEEECCCCC--C-CCCHHHHHHHHHHHHCCCC-----CCCEE
T ss_conf 9181---33089888701689999999995979-9988999768881--1-0499999999886411257-----88818
Q ss_pred EEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCC--CCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECC
Q ss_conf 99998289965289999999990999970999588--0109999977367899257887896389999999199899839
Q 001781 456 FVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD 533 (1013)
Q Consensus 456 FLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~--~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASd 533 (1013)
++++|.++..+...++.+.+. +.. .+.+.|. .+++..+|+.||++|+||..| ++|.+++|||+||+|||+++
T Consensus 69 -l~i~G~g~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~di~v~ps~~e--~~~~~~~Eam~~G~pvI~~~ 142 (196)
T d2bfwa1 69 -FIIIGKGDPELEGWARSLEEK--HGN-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASA 142 (196)
T ss_dssp -EEEECCBCHHHHHHHHHHHHH--CTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCC--SSCHHHHHHHHTTCEEEEES
T ss_pred -EEEEEECCCCHHHHHHHHHHC--CCE-EEEEEECCCCCCCHHCCCCCCCCCCCCCCC--CCCCCCHHHHHCCCEEEECC
T ss_conf -999961355213454332211--311-577530233211000012323344322211--23322013331486046517
Q ss_pred CCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 887023121598499994899999999999999596107999999999999999606
Q 001781 534 FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNML 590 (1013)
Q Consensus 534 vgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae~fs 590 (1013)
.++.+|++.+ .+|++++++|+++++++|.++++... ..+.+|+++|++.+++|+
T Consensus 143 ~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~--~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 143 VGGLRDIITN-ETGILVKAGDPGELANAILKALELSR--SDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp CHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHCC
T ss_conf 8853201028-73146789999999999999995799--999999999999998378
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=2.4e-20 Score=160.12 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=121.4
Q ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC-CHHHHHHHHHHCCCCCCCEEECCC
Q ss_conf 8999982477757665689999999999899984205688990999998289965-289999999990999970999588
Q 001781 412 IVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDG-YNDALQEVASRLGLLEHSVRHYGF 490 (1013)
Q Consensus 412 ~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~-Y~e~LkelakeLgL~dg~V~FlG~ 490 (1013)
..++++||+.+ .||++.+++|++.+ ++.+ ++++|.+... +.+.+.+.+.+.. .+ +|+|+|.
T Consensus 13 ~~~l~iGrl~~----~K~~~~~i~a~~~l-----------~~~~-l~ivg~~~~~~~~~~~~~~~~~~~-~~-~v~~~g~ 74 (166)
T d2f9fa1 13 DFWLSVNRIYP----EKRIELQLEVFKKL-----------QDEK-LYIVGWFSKGDHAERYARKIMKIA-PD-NVKFLGS 74 (166)
T ss_dssp SCEEEECCSSG----GGTHHHHHHHHHHC-----------TTSC-EEEEBCCCTTSTHHHHHHHHHHHS-CT-TEEEEES
T ss_pred CEEEEEECCCC----CCCHHHHHHHHHHH-----------CCCE-EEEEEECCCCCCHHHHHHHHCCCC-CC-CEEEEEC
T ss_conf 99999923754----34999999999983-----------3974-999972244542233332202356-67-5887421
Q ss_pred C--CCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 0--10999997736789925788789638999999919989983988702312159849999489999999999999959
Q 001781 491 N--GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISN 568 (1013)
Q Consensus 491 ~--eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d 568 (1013)
. +++..+|+.||++++||..| +||++++|||++|+|||+++.++.+|++.++.+|++++ .|+++++++|..++++
T Consensus 75 ~~~~~~~~~~~~ad~~i~ps~~e--~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~-~d~~~~~~~i~~l~~~ 151 (166)
T d2f9fa1 75 VSEEELIDLYSRCKGLLCTAKDE--DFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVN-ADVNEIIDAMKKVSKN 151 (166)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSC--CSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEEC-SCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCC-CCHHHHHHHHHHHHHC
T ss_conf 22111222222222233212211--23322110112233220552786403304884124689-9999999999999809
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 610799999999999
Q 001781 569 GKLSKFARTVASAGR 583 (1013)
Q Consensus 569 ~elR~~~~~Mg~aAR 583 (1013)
++.. ++.+.++|+
T Consensus 152 ~~~~--~~~~~~~a~ 164 (166)
T d2f9fa1 152 PDKF--KKDCFRRAK 164 (166)
T ss_dssp TTTT--HHHHHHHHH
T ss_pred HHHH--HHHHHHHHH
T ss_conf 9999--999999985
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=2.3e-07 Score=67.43 Aligned_cols=306 Identities=12% Similarity=0.065 Sum_probs=157.8
Q ss_pred EEEEEECCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCH-------------------------------HHHHHH
Q ss_conf 7999964568998410289999999987988999981899835-------------------------------799999
Q 001781 224 RIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKIYAVRSGNSH-------------------------------SLWEQI 272 (1013)
Q Consensus 224 RIalI~g~l~~gg~~l~ll~Lak~L~e~GyeV~Vls~~~g~~~-------------------------------~~~k~l 272 (1013)
||++..+ +-||=-.....+++.|++.||+|.+++..++... ..+..+
T Consensus 2 kili~~~--GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (351)
T d1f0ka_ 2 RLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAW 79 (351)
T ss_dssp EEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHH
T ss_pred EEEEECC--CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7999838--85898999999999998589989999958832432235049957999788867777799999998877767
Q ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999984249639999375448999999998521014689999859999829841146521234559989999999740
Q 001781 273 AGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFS 352 (1013)
Q Consensus 273 ~~LiklLk~~kpDIIh~~~~~~~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y~~~~l~klLsk~~~~l~ 352 (1013)
.....++...+++++..............++. .++|++...+..... + . ......
T Consensus 80 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~----------~~ip~~~~~~~~~~~-----~-~---------~~~~~~ 134 (351)
T d1f0ka_ 80 RQARAIMKAYKPDVVLGMGGYVSGPGGLAAWS----------LGIPVVLHEQNGIAG-----L-T---------NKWLAK 134 (351)
T ss_dssp HHHHHHHHHHCCSEEEECSSTTHHHHHHHHHH----------TTCCEEEEECSSSCC-----H-H---------HHHHTT
T ss_pred HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH----------CCCCEEECCCCCCCC-----H-H---------HHHHHH
T ss_conf 77788763134430011032211344545540----------564346322212310-----4-6---------777654
Q ss_pred CCCEEEECCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHH
Q ss_conf 25499974897033211689998899389997831000137624679999970999996899998247775766568999
Q 001781 353 RVNVIVFPDYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432 (1013)
Q Consensus 353 ~AD~VI~~s~~~~~ly~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dl 432 (1013)
.++.+....... ......+.+. ... ....... .........+...++.+|.. .|...
T Consensus 135 ~~~~~~~~~~~~--------~~~~~~~~~~-~~~---~~~~~~~----~~~~~~~~~~~~~i~~~~gs-------~g~~~ 191 (351)
T d1f0ka_ 135 IATKVMQAFPGA--------FPNAEVVGNP-VRT---DVLALPL----PQQRLAGREGPVRVLVVGGS-------QGARI 191 (351)
T ss_dssp TCSEEEESSTTS--------SSSCEECCCC-CCH---HHHTSCC----HHHHHTTCCSSEEEEEECTT-------TCCHH
T ss_pred HCCEEECCCCCC--------CCCEEEECCC-CCC---CCCCCHH----HHHHHHCCCCCCCCCCCCCC-------CHHHH
T ss_conf 134011023566--------5300387677-643---1000005----77653203587431334454-------01346
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCEEEECCCCCC
Q ss_conf 99999998999842056889909999982899652899999999909999709995880109999977367899257887
Q 001781 433 AMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVE 512 (1013)
Q Consensus 433 LLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~~eDi~~lLaaADIfVlPS~~EE 512 (1013)
..+.+........ .... .+.++..... ......... .... ++...++.+++..+|+.||++|.-
T Consensus 192 ~~~~~~~~~~~l~------~~~~-~i~~~~~~~~-~~~~~~~~~--~~~~-~~~v~~f~~~~~~lm~~adl~It~----- 255 (351)
T d1f0ka_ 192 LNQTMPQVAAKLG------DSVT-IWHQSGKGSQ-QSVEQAYAE--AGQP-QHKVTEFIDDMAAAYAWADVVVCR----- 255 (351)
T ss_dssp HHHHHHHHHHHHG------GGEE-EEEECCTTCH-HHHHHHHHH--TTCT-TSEEESCCSCHHHHHHHCSEEEEC-----
T ss_pred HHHHHHHHHHHHC------CCCE-EEEECCCCCH-HHHHHHHCC--CCCC-CCEEEEEHHHHHHHHHHCCHHHCC-----
T ss_conf 6888887666524------5530-4542134104-443343202--3322-315554305589999747422205-----
Q ss_pred CCCCHHHHHHHHHCCCEEECCCC---C----CHHHHCCCCEEEEECCC--CHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 89638999999919989983988---7----02312159849999489--999999999999959610799999999999
Q 001781 513 QGFPSLIVRAMTFGIPVITPDFP---I----IKEYVAEGAQVIFFQKD--NPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1013)
Q Consensus 513 EGFGivILEAMA~GlPVIASdvg---G----i~EiI~dG~tGlLv~p~--D~eeLAeAI~~LL~d~elR~~~~~Mg~aAR 583 (1013)
+-+.++.|++++|+|+|....+ + ..+.+.+...|..++.. +.+.+.++|..+ +++. +.+|+++++
T Consensus 256 -~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~---~~~~~~~~~ 329 (351)
T d1f0ka_ 256 -SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRET---LLTMAERAR 329 (351)
T ss_dssp -CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHH---HHHHHHHHH
T ss_pred -CCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHH--CHHH---HHHHHHHHH
T ss_conf -5423778888717854654154677669999999998899899223319999999999863--9999---999999987
Q ss_pred HHHHHHCHHHHHHHHHHH
Q ss_conf 999960699999999999
Q 001781 584 LHAKNMLALDCVTRYARI 601 (1013)
Q Consensus 584 e~ae~fsse~~i~~y~~L 601 (1013)
+......+++.++...++
T Consensus 330 ~~~~~~~a~~i~~~i~~l 347 (351)
T d1f0ka_ 330 AASIPDATERVANEVSRV 347 (351)
T ss_dssp HTCCTTHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 269956999999999999
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=99.08 E-value=5.2e-07 Score=64.94 Aligned_cols=282 Identities=13% Similarity=0.020 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCHH-HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999984249639999375448-99999999852101468999985999982984114652123455998999999
Q 001781 270 EQIAGQISILGQEQYSLIDWSIFDGI-IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWK 348 (1013)
Q Consensus 270 k~l~~LiklLk~~kpDIIh~~~~~~~-lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y~~~~l~klLsk~~ 348 (1013)
..+..+.+++.+.+||+|..+.-... +...+++.. .++|++.. ++......... ...........
T Consensus 75 ~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~----------~~ipi~Hi-egG~rsg~~~~---~~~de~~R~~i 140 (373)
T d1v4va_ 75 RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFL----------EGIPVGHV-EAGLRSGNLKE---PFPEEANRRLT 140 (373)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHH----------TTCCEEEE-TCCCCCSCTTS---STTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----------HHHHHEEE-CCCCCCCCCCC---CCCHHHHHHHH
T ss_conf 999987666640376400111367531037788987----------62122241-34345543356---76166666552
Q ss_pred HHHCCCCEEEECCCCCHHH--HCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 9740254999748970332--11689998899389997831000137624679999970999996899998247775766
Q 001781 349 SVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNEL 426 (1013)
Q Consensus 349 ~~l~~AD~VI~~s~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~ 426 (1013)
..+ ++..++++...... ..+.+..+++++-+..+|. +. ......+.....+.+.++++..-|.. .
T Consensus 141 skl--s~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~-----i~--~~~~~~~~~~~~~~~~~~lvt~hr~~----n 207 (373)
T d1v4va_ 141 DVL--TDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDA-----VL--LAAKLGRLPEGLPEGPYVTVTMHRRE----N 207 (373)
T ss_dssp HHH--CSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHH-----HH--HHHHHCCCCTTCCSSCEEEECCCCGG----G
T ss_pred CCC--CCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHHH-----HH--HHHHHCCCCCCCCCCCCEEEEECCCC----C
T ss_conf 234--43255122156666666304542134426621557-----77--65431100022344553168842655----5
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECC--CCCCHHHHHHHCCEE
Q ss_conf 568999999999989998420568899099999828996528999999999099997099958--801099999773678
Q 001781 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG--FNGDVNGVLLMADIV 504 (1013)
Q Consensus 427 ~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG--~~eDi~~lLaaADIf 504 (1013)
.++...+++++..+.... .++.++ +...... ...+...+.+...+ ++.+.. ...+...++..|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~-------~~~~~i-~p~~~~~---~~~~~~~~~~~~~~-n~~~~~~l~~~~~l~ll~~s~~v 275 (373)
T d1v4va_ 208 WPLLSDLAQALKRVAEAF-------PHLTFV-YPVHLNP---VVREAVFPVLKGVR-NFVLLDPLEYGSMAALMRASLLL 275 (373)
T ss_dssp GGGHHHHHHHHHHHHHHC-------TTSEEE-EECCSCH---HHHHHHHHHHTTCT-TEEEECCCCHHHHHHHHHTEEEE
T ss_pred CCHHHHHHHHHHHHHHHC-------CCCEEE-EEECCCC---CCHHHHHHHHCCCC-CCEEECCCHHHHHHHHHHHCEEE
T ss_conf 312789999999986533-------565035-6403422---21035555430333-20011100078888876430168
Q ss_pred EECCCCCCCCCCHHHHHHHHHCCCEEEC-CCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 9925788789638999999919989983-988702312159849999489999999999999959610799999999999
Q 001781 505 LYGSSQVEQGFPSLIVRAMTFGIPVITP-DFPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGR 583 (1013)
Q Consensus 505 VlPS~~EEEGFGivILEAMA~GlPVIAS-dvgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aAR 583 (1013)
+--| |..+.||.++|+|+|.- +.+.-.|.+..|.+ .++ ..|.+++.+++..+++++..+ ..|...
T Consensus 276 ignS-------ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv-~~d~~~I~~~i~~~l~~~~~~---~~~~~~-- 341 (373)
T d1v4va_ 276 VTDS-------GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLA-GTDPEGVYRVVKGLLENPEEL---SRMRKA-- 341 (373)
T ss_dssp EESC-------HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EEC-CSCHHHHHHHHHHHHTCHHHH---HHHHHS--
T ss_pred ECCC-------CHHHHCCHHHCCCEEEECCCCCCHHHHHCCEE-EEC-CCCHHHHHHHHHHHHCCHHHH---HHCCCC--
T ss_conf 5064-------12222003205868984887669878962904-975-899999999999997198988---640248--
Q ss_pred HHHHHHCH-HHHHHHHHHHHHHHHC
Q ss_conf 99996069-9999999999999755
Q 001781 584 LHAKNMLA-LDCVTRYARILENVLN 607 (1013)
Q Consensus 584 e~ae~fss-e~~i~~y~~Lye~iL~ 607 (1013)
.+-+. -+...+..+.+.+.++
T Consensus 342 ---~npYGdG~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 342 ---KNPYGDGKAGLMVARGVAWRLG 363 (373)
T ss_dssp ---CCSSCCSCHHHHHHHHHHHHTT
T ss_pred ---CCCCCCCHHHHHHHHHHHHHHC
T ss_conf ---8989898799999999999848
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.98 E-value=1.3e-06 Score=62.17 Aligned_cols=130 Identities=18% Similarity=0.014 Sum_probs=82.4
Q ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECC
Q ss_conf 96899998247775766568999999999989998420568899099999828996528999999999099997099958
Q 001781 410 DEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYG 489 (1013)
Q Consensus 410 d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG 489 (1013)
...++...|... ..+...+.+.+....... ..++++..+..... .....+ +|.+.+
T Consensus 221 ~~~v~~~~~~~~-----~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~----------~~~~~~-~v~i~~ 276 (391)
T d1pn3a_ 221 STPVYVGFGSSS-----RPATADAAKMAIKAVRAS--------GRRIVLSRGWADLV----------LPDDGA-DCFVVG 276 (391)
T ss_dssp SCCEEEECTTCC-----STHHHHHHHHHHHHHHHT--------TCCEEEECTTTTCC----------CSSCCT-TCCEES
T ss_pred CCEEEEECCCCC-----CCCHHHHHHHHHHHHHHC--------CCEEEEECCCCCCC----------CCCCCC-CEEEEC
T ss_conf 972787224312-----232789999999999856--------97799943643334----------456889-889954
Q ss_pred CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC--------CHHHHCCCCEEEEECCCC--HHHHH
Q ss_conf 80109999977367899257887896389999999199899839887--------023121598499994899--99999
Q 001781 490 FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI--------IKEYVAEGAQVIFFQKDN--PEGLS 559 (1013)
Q Consensus 490 ~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG--------i~EiI~dG~tGlLv~p~D--~eeLA 559 (1013)
+. +...+|..+|++|..+- ..++.|||++|+|+|+....+ +.+.+.+...|..++..+ +++++
T Consensus 277 ~~-p~~~ll~~a~~~v~hgG------~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~ 349 (391)
T d1pn3a_ 277 EV-NLQELFGRVAAAIHHDS------AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLS 349 (391)
T ss_dssp SC-CHHHHHTTSSCEEEESC------HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHH
T ss_pred CC-CHHHHHHHCCEEEECCC------HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHH
T ss_conf 46-87999842548985274------379999998288689933556774529999999998798897685789999999
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999999959610
Q 001781 560 RAFSLFISNGKL 571 (1013)
Q Consensus 560 eAI~~LL~d~el 571 (1013)
++|.+++++ +.
T Consensus 350 ~~i~~~l~~-~~ 360 (391)
T d1pn3a_ 350 AALDTALAP-EI 360 (391)
T ss_dssp HHHHHHTST-TH
T ss_pred HHHHHHHCH-HH
T ss_conf 999998399-99
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.82 E-value=7.5e-06 Score=56.67 Aligned_cols=129 Identities=15% Similarity=-0.019 Sum_probs=83.2
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCC
Q ss_conf 68999982477757665689999999999899984205688990999998289965289999999990999970999588
Q 001781 411 EIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF 490 (1013)
Q Consensus 411 ~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~ 490 (1013)
..+++..|.... .....+.+.+....... +... .+..+..... ...+.+ +|.+.++
T Consensus 238 ~~v~~~~gs~~~-----~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~----------~~~~~~-~v~~~~~ 293 (401)
T d1rrva_ 238 PPVHIGFGSSSG-----RGIADAAKVAVEAIRAQ-------GRRV-ILSRGWTELV----------LPDDRD-DCFAIDE 293 (401)
T ss_dssp CCEEECCTTCCS-----HHHHHHHHHHHHHHHHT-------TCCE-EEECTTTTCC----------CSCCCT-TEEEESS
T ss_pred CEEEEECCCCCC-----CCHHHHHHHHHHHHHHC-------CCEE-EEECCCCCCC----------CCCCCC-CEEEEEC
T ss_conf 839998786445-----78899999999998626-------9748-9950544345----------545789-8899731
Q ss_pred CCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC----CHHHHCCCCEEEEECCC--CHHHHHHHHHH
Q ss_conf 0109999977367899257887896389999999199899839887----02312159849999489--99999999999
Q 001781 491 NGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD--NPEGLSRAFSL 564 (1013)
Q Consensus 491 ~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG----i~EiI~dG~tGlLv~p~--D~eeLAeAI~~ 564 (1013)
. +...+|..+|++|.- |...++.|||++|+|+|+....+ ..+.+++...|..++.. +++.++++|.+
T Consensus 294 ~-p~~~ll~~~~~~I~h------gG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~ 366 (401)
T d1rrva_ 294 V-NFQALFRRVAAVIHH------GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTT 366 (401)
T ss_dssp C-CHHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHH
T ss_pred C-CCHHHHHHCCEEEEC------CCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
T ss_conf 4-817776212488861------772489999983999898066120899999999879889757478999999999999
Q ss_pred HHHCCCC
Q ss_conf 9959610
Q 001781 565 FISNGKL 571 (1013)
Q Consensus 565 LL~d~el 571 (1013)
+++ ++.
T Consensus 367 vl~-~~~ 372 (401)
T d1rrva_ 367 VLA-PET 372 (401)
T ss_dssp HTS-HHH
T ss_pred HHC-HHH
T ss_conf 849-799
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.80 E-value=6.8e-06 Score=56.98 Aligned_cols=82 Identities=16% Similarity=-0.031 Sum_probs=64.4
Q ss_pred CCCCCCEEECCCCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC----CHHHHCCCCEEEEECCC-
Q ss_conf 9999709995880109999977367899257887896389999999199899839887----02312159849999489-
Q 001781 479 GLLEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVAEGAQVIFFQKD- 553 (1013)
Q Consensus 479 gL~dg~V~FlG~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG----i~EiI~dG~tGlLv~p~- 553 (1013)
..++ +|++.++.+ ...+|..+|++|+- |...++.|||++|+|+|+....+ ..+.+++...|..++..
T Consensus 282 ~~~~-nv~~~~~~p-~~~~l~~~~~~V~h------gG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 282 DDGA-DCFAIGEVN-HQVLFGRVAAVIHH------GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp SCGG-GEEECSSCC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CCCC-CEEEEECCC-HHHHHHHCCEEEEC------CCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCC
T ss_conf 5789-789970258-79999545899963------771699999981999998066141799999999879888768478
Q ss_pred -CHHHHHHHHHHHHHC
Q ss_conf -999999999999959
Q 001781 554 -NPEGLSRAFSLFISN 568 (1013)
Q Consensus 554 -D~eeLAeAI~~LL~d 568 (1013)
++++++++|.+++++
T Consensus 354 ~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 354 PTFDSLSAALATALTP 369 (401)
T ss_dssp CCHHHHHHHHHHHTSH
T ss_pred CCHHHHHHHHHHHHCH
T ss_conf 9999999999999697
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.57 E-value=2.3e-05 Score=53.19 Aligned_cols=285 Identities=12% Similarity=0.051 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCHH-HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999984249639999375448-99999999852101468999985999982984114652123455998999999
Q 001781 270 EQIAGQISILGQEQYSLIDWSIFDGI-IADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWK 348 (1013)
Q Consensus 270 k~l~~LiklLk~~kpDIIh~~~~~~~-lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~~y~~~~l~klLsk~~ 348 (1013)
..+..+.+.+.+.+||+|..+.-... +.+.+++.. .++|++.. |+......... ...........
T Consensus 75 ~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~----------~~Ipi~Hi-egG~~s~~~~~---~~~de~~R~~i 140 (377)
T d1o6ca_ 75 NALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFY----------HQIAVGHV-EAGLRTGNKYS---PFPEELNRQMT 140 (377)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHH----------TTCEEEEE-SCCCCCSCTTT---TTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH----------CCCEEEEE-ECCCCCCCCCC---CCCHHHHCCCC
T ss_conf 999850566653366536764034543015666531----------14227999-51456543323---47145540035
Q ss_pred HHHCCCCEEEECCCCCHHH--HCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 9740254999748970332--11689998899389997831000137624679999970999996899998247775766
Q 001781 349 SVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNEL 426 (1013)
Q Consensus 349 ~~l~~AD~VI~~s~~~~~l--y~~l~~~ki~VIPnggVDl~~~~~F~p~~~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~ 426 (1013)
..+ ++..++++...... ..+.+..+++++-+..+|... .+......... ......+.++++..-|... .
T Consensus 141 skl--s~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~--~~~~~~~~~~~--~~~~~~~~~ilvt~Hr~~~---~ 211 (377)
T d1o6ca_ 141 GAI--ADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALN--TTVRDGYSHPV--LDQVGEDKMILLTAHRREN---L 211 (377)
T ss_dssp HHH--CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHH--HHCCSSCCCST--TTTTTTSEEEEECC---------
T ss_pred CCC--EEEEEECCHHHHHHHHHHCCCCCEEEECCCHHHHHHH--HHHHHHHHHHH--HHHCCCCCEEEEEECCCCC---C
T ss_conf 653--0488632346663443303445427523420678888--77777775333--4430578449998323101---4
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHH-HHHCCCCCCCEEECCC--CCCHHHHHHHCCE
Q ss_conf 568999999999989998420568899099999828996528999999-9990999970999588--0109999977367
Q 001781 427 SWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEV-ASRLGLLEHSVRHYGF--NGDVNGVLLMADI 503 (1013)
Q Consensus 427 ~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkel-akeLgL~dg~V~FlG~--~eDi~~lLaaADI 503 (1013)
.+.....+.++..+.... .+..++ + -..+. ...+.. .+.+...+ +|.+..+ ..+...++..|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~-------~~~~~i-~-~~~~~---~~~~~~~~~~~~~~~-ni~~~~~l~~~~fl~llk~s~~ 278 (377)
T d1o6ca_ 212 GEPMENMFKAIRRIVGEF-------EDVQVV-Y-PVHLN---PVVREAAHKHFGDSD-RVHLIEPLEVIDFHNFAAKSHF 278 (377)
T ss_dssp ----HHHHHHHHHHHHHC-------TTEEEE-E-C-------CHHHHHHHHC--CCS-SEEECCCCCHHHHHHHHHHCSE
T ss_pred CCCHHHHHHHHHHHCCCC-------CCCCCC-C-CCCCC---CCCCHHHHHCCCCCC-CEEECCCCCHHHHHHHHHHHHE
T ss_conf 663378999987521233-------556532-3-45521---132112210134565-1475132136889999864225
Q ss_pred EEECCCCCCCCCCHHHHHHHHHCCCEEECC-CCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 899257887896389999999199899839-8870231215984999948999999999999995961079999999999
Q 001781 504 VLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAG 582 (1013)
Q Consensus 504 fVlPS~~EEEGFGivILEAMA~GlPVIASd-vgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~Mg~aA 582 (1013)
++--| |..+.||-.+|+|+|.-. .+..+|.+..| +-.+++ .|.+++.+++..+++++..+ ..+..
T Consensus 279 vIgnS-------ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~-~~~~~I~~~i~~~l~~~~~~---~~~~~-- 344 (377)
T d1o6ca_ 279 ILTDS-------GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAG-TDEENIYQLAKQLLTDPDEY---KKMSQ-- 344 (377)
T ss_dssp EEEC---------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEEC-SCHHHHHHHHHHHHHCHHHH---HHHHH--
T ss_pred EECCC-------CHHHHHHHHHHCEEEEECCCCCCCCHHHCC-EEEECC-CCHHHHHHHHHHHHHCHHHH---HHHCC--
T ss_conf 64164-------046776666541489807887582200068-059878-99999999999997496877---63065--
Q ss_pred HHHHHH-HCHHHHHHHHHHHHHHHHC
Q ss_conf 999996-0699999999999999755
Q 001781 583 RLHAKN-MLALDCVTRYARILENVLN 607 (1013)
Q Consensus 583 Re~ae~-fsse~~i~~y~~Lye~iL~ 607 (1013)
..+ |-.-+..++..+++.+-+.
T Consensus 345 ---~~npYGdG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 345 ---ASNPYGDGEASRRIVEELLFHYG 367 (377)
T ss_dssp ---CCCTTCCSCHHHHHHHHHHHHTT
T ss_pred ---CCCCCCCCHHHHHHHHHHHHHHC
T ss_conf ---88989898299999999998508
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.11 E-value=0.00039 Score=44.40 Aligned_cols=98 Identities=11% Similarity=-0.006 Sum_probs=63.9
Q ss_pred CEEECC--CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC----CHHHH-CCCCEEEEECC----
Q ss_conf 099958--80109999977367899257887896389999999199899839887----02312-15984999948----
Q 001781 484 SVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYV-AEGAQVIFFQK---- 552 (1013)
Q Consensus 484 ~V~FlG--~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG----i~EiI-~dG~tGlLv~p---- 552 (1013)
++.+.. ++.+ ...+..+++||.- |--.++.||+.+|+|+|+....+ +...+ +....|..++.
T Consensus 331 n~~v~~~~pq~~-~l~~p~~~~fItH------GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~ 403 (461)
T d2acva1 331 KGMICGWAPQVE-VLAHKAIGGFVSH------CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 403 (461)
T ss_dssp SEEEESSCCHHH-HHHSTTEEEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred CEEEEECCCHHH-HHHCCCCCEEEEC------CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf 738985187788-8855657779833------884489999985999896776000288999999984936784153113
Q ss_pred ----CCHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHH
Q ss_conf ----9999999999999959-61079999999999999996
Q 001781 553 ----DNPEGLSRAFSLFISN-GKLSKFARTVASAGRLHAKN 588 (1013)
Q Consensus 553 ----~D~eeLAeAI~~LL~d-~elR~~~~~Mg~aARe~ae~ 588 (1013)
-+.+++++++.+++++ +..|+..+++++.+|+.+++
T Consensus 404 ~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~ 444 (461)
T d2acva1 404 GSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVD 444 (461)
T ss_dssp TCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTST
T ss_pred CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 67854799999999999608899999999999999998427
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=0.00095 Score=41.66 Aligned_cols=286 Identities=13% Similarity=0.084 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC-HHHHHHHHHHHHHH
Q ss_conf 9999999998424963999937544-899999999852101468999985999982984114652-12345599899999
Q 001781 270 EQIAGQISILGQEQYSLIDWSIFDG-IIADSLEAKEAISSLMQEPFHSIPLVWIIQEDSLANRLP-VYVERGFQNLLSYW 347 (1013)
Q Consensus 270 k~l~~LiklLk~~kpDIIh~~~~~~-~lv~~Laak~~~s~l~qep~~~IPVI~tiHg~~l~~~~~-~y~~~~l~klLsk~ 347 (1013)
..+..+...+.+.+||+|..+.-.. .+.+.+++.. .++|++.. |+........ ..+ .......
T Consensus 73 ~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~----------~~ipi~Hi-egG~~s~~~~~~~p----de~~R~~ 137 (376)
T d1f6da_ 73 RILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFY----------QRIPVGHV-EAGLRTGDLYSPWP----EEANRTL 137 (376)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHT----------TTCCEEEE-SCCCCCSCTTSSTT----HHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH----------HCCEEEEE-ECCCCCCCCCCCCC----HHHHHHH
T ss_conf 999864788974567622431034431368999874----------07538998-52446542000474----0665542
Q ss_pred HHHHCCCCEEEECCCCCHHH--HCCCCCCCEEEECCCCCCCCCC--CCCC-CCHHHH-HHHHHCCCCCC-CEEEEEECCC
Q ss_conf 99740254999748970332--1168999889938999783100--0137-624679-99997099999-6899998247
Q 001781 348 KSVFSRVNVIVFPDYTLPML--YSVLDAGNFFVIPGSPADVWAV--EAYS-KSHEKY-QLRKENGFLKD-EIVVVVVGSS 420 (1013)
Q Consensus 348 ~~~l~~AD~VI~~s~~~~~l--y~~l~~~ki~VIPnggVDl~~~--~~F~-p~~~~~-~lR~~lgi~~d-~~vIL~VGRl 420 (1013)
...+ ++..++++...... ..+..+.+++++-+..+|.... .... ...... .......+..+ .++++..-|.
T Consensus 138 iskl--s~~hf~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~ 215 (376)
T d1f6da_ 138 TGHL--AMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRR 215 (376)
T ss_dssp HHHT--CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCB
T ss_pred HCCC--EEEEEECCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCC
T ss_conf 0320--04887434788868775189865341216724878888776542351232111102233477776699833541
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCC--CCCHHHHH
Q ss_conf 7757665689999999999899984205688990999998289965289999999990999970999588--01099999
Q 001781 421 FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGF--NGDVNGVL 498 (1013)
Q Consensus 421 ~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~LkelakeLgL~dg~V~FlG~--~eDi~~lL 498 (1013)
....+....++.++..+.... .++.++ +...... .......+.+...+ ++.+..+ ..+...++
T Consensus 216 ---~~~~~~~~~i~~~l~~~~~~~-------~~~~ii-~p~~~~~---~~~~~~~~~~~~~~-ni~~~~~l~~~~fl~ll 280 (376)
T d1f6da_ 216 ---ESFGRGFEEICHALADIATTH-------QDIQIV-YPVHLNP---NVREPVNRILGHVK-NVILIDPQEYLPFVWLM 280 (376)
T ss_dssp ---SSCCHHHHHHHHHHHHHHHHC-------TTEEEE-EECCBCH---HHHHHHHHHHTTCT-TEEEECCCCHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHC-------CEEEEE-CCCCCCH---HHHHHHHHHHCCCC-CCEEECCCCHHHHHHHH
T ss_conf ---111200999999986543421-------404785-2544321---24446766640444-51332355678999998
Q ss_pred HHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECC-CCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 77367899257887896389999999199899839-88702312159849999489999999999999959610799999
Q 001781 499 LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPD-FPIIKEYVAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFART 577 (1013)
Q Consensus 499 aaADIfVlPS~~EEEGFGivILEAMA~GlPVIASd-vgGi~EiI~dG~tGlLv~p~D~eeLAeAI~~LL~d~elR~~~~~ 577 (1013)
..|++++--|. ..+.||-.+|+|+|.-. ....++-+..+ +-.+++ .|.+++.+++.++++++..+ ..
T Consensus 281 ~~a~~vignSs-------sgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~-~~~~~I~~ai~~~l~~~~~~---~~ 348 (376)
T d1f6da_ 281 NHAWLILTDSG-------GIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVG-TDKQRIVEEVTRLLKDENEY---QA 348 (376)
T ss_dssp HHCSEEEESSS-------GGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECC-SSHHHHHHHHHHHHHCHHHH---HH
T ss_pred HHCEEEEECCC-------CHHHHHHHHCCCEEECCCCCCCCCCEECC-EEEECC-CCHHHHHHHHHHHHHCHHHH---HH
T ss_conf 41639983685-------06766787489889727876576412368-069878-99999999999997285766---53
Q ss_pred HHHHHHHHHHH-HCHHHHHHHHHHHHHH
Q ss_conf 99999999996-0699999999999999
Q 001781 578 VASAGRLHAKN-MLALDCVTRYARILEN 604 (1013)
Q Consensus 578 Mg~aARe~ae~-fsse~~i~~y~~Lye~ 604 (1013)
+.. ..+ |-.-+..++..+++++
T Consensus 349 ~~~-----~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 349 MSR-----AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHH-----SCCTTCCSCHHHHHHHHHHH
T ss_pred HCC-----CCCCCCCCHHHHHHHHHHHH
T ss_conf 045-----78989898499999999985
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.70 E-value=0.0019 Score=39.59 Aligned_cols=142 Identities=14% Similarity=0.067 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEEECCCCCCCH--HHHHHHHHHC----
Q ss_conf 999996899998247775766568999999999989998420-568899099999828996528--9999999990----
Q 001781 406 GFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARR-NSVEGSFKFVFLCGNSTDGYN--DALQEVASRL---- 478 (1013)
Q Consensus 406 gi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~l-k~~gpdikFLVIvG~G~e~Y~--e~LkelakeL---- 478 (1013)
.+.++...++++-|+.. .|...+.+.-+..+..+..+. ........ +|++|+-...|. ..+-+++.++
T Consensus 545 ~ldp~~lfd~~arRfhe----YKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q-~IFaGKAhP~d~~gK~iIk~I~~va~~i 619 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHE----YKRQLLNCLHVITLYNRIKKEPNKFVVPRT-VMIGGKAAPGYHMAKMIIKLITAIGDVV 619 (824)
T ss_dssp CCCTTSEEEEEESCCCG----GGTHHHHHHHHHHHHHHHHHCTTSCCCCEE-EEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHEEECHH----HHHHHHHHHHHHHHHHHHHHCCCCCCCCEE-EEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 78964110131000023----333456676589999876534567888749-9980788976388999999999999987
Q ss_pred C----CCC-CCEEECC-CC-CCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCC--CCEEEE
Q ss_conf 9----999-7099958-80-1099999773678992578878963899999991998998398870231215--984999
Q 001781 479 G----LLE-HSVRHYG-FN-GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1013)
Q Consensus 479 g----L~d-g~V~FlG-~~-eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~d--G~tGlL 549 (1013)
+ +.+ .+|.|+. +. .-...++.++||-...|...-|..|.+=+-+|.-|.+.|++--|.+.|+.++ ++|||.
T Consensus 620 n~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~ 699 (824)
T d2gj4a1 620 NHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFI 699 (824)
T ss_dssp TTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred HCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEE
T ss_conf 41811215344887078766999975114344131899973457750458997598356356635899998647566798
Q ss_pred ECC
Q ss_conf 948
Q 001781 550 FQK 552 (1013)
Q Consensus 550 v~p 552 (1013)
|-.
T Consensus 700 fG~ 702 (824)
T d2gj4a1 700 FGM 702 (824)
T ss_dssp CSC
T ss_pred ECC
T ss_conf 179
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=97.55 E-value=0.003 Score=38.10 Aligned_cols=147 Identities=9% Similarity=-0.011 Sum_probs=97.1
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEEECCCCCCCH--HHHHHHHHHCC---
Q ss_conf 99999689999824777576656899999999998999842056-8899099999828996528--99999999909---
Q 001781 406 GFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNS-VEGSFKFVFLCGNSTDGYN--DALQEVASRLG--- 479 (1013)
Q Consensus 406 gi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~-~gpdikFLVIvG~G~e~Y~--e~LkelakeLg--- 479 (1013)
.+.++...++++-|+.. .|...+++.-...+......... ...... +|++|+-...|. ..+.+++.+..
T Consensus 521 ~ldp~~LtigfaRRfa~----YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq-~IfaGKAhP~d~~gK~iIk~I~~va~~i 595 (796)
T d1l5wa_ 521 EINPQAIFDIQIKRLHE----YKRQHLNLLHILALYKEIRENPQADRVPRV-FLFGAKAAPGYYLAKNIIFAINKVADVI 595 (796)
T ss_dssp CCCTTSEEEEEESCCCG----GGTHHHHHHHHHHHHHHHHTCTTCCCCCEE-EEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHCCCHHHHHHHH----HHCCCCHHHHHHHHHHHHHCCCCCCCCCEE-EEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 35856514034345444----314530353599999998508645778659-9974888983178999999999999986
Q ss_pred -C-CC----CCEEECC-CCCC-HHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHHHCC--CCEEEE
Q ss_conf -9-99----7099958-8010-99999773678992578878963899999991998998398870231215--984999
Q 001781 480 -L-LE----HSVRHYG-FNGD-VNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAE--GAQVIF 549 (1013)
Q Consensus 480 -L-~d----g~V~FlG-~~eD-i~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgGi~EiI~d--G~tGlL 549 (1013)
- ++ .+|.|+. +.-. ...+..++||-+..+...-|..|.+-+-||.-|.+.+++--|.+.|+.++ ++|||.
T Consensus 596 n~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~ 675 (796)
T d1l5wa_ 596 NNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFI 675 (796)
T ss_dssp HTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred CCCHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEE
T ss_conf 17855436333898078756899987440126540999873457826779998597166046644798888637453688
Q ss_pred ECCCCHHHH
Q ss_conf 948999999
Q 001781 550 FQKDNPEGL 558 (1013)
Q Consensus 550 v~p~D~eeL 558 (1013)
|. .+.++.
T Consensus 676 fG-~~~~ev 683 (796)
T d1l5wa_ 676 FG-HTVEQV 683 (796)
T ss_dssp CS-CCHHHH
T ss_pred EC-CCHHHH
T ss_conf 06-866777
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.05 E-value=0.01 Score=34.37 Aligned_cols=95 Identities=13% Similarity=0.030 Sum_probs=63.6
Q ss_pred CCCCEEECCCCCCHHHHHH--HCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC----CHHHH-CCCCEEEEECCC
Q ss_conf 9970999588010999997--7367899257887896389999999199899839887----02312-159849999489
Q 001781 481 LEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYV-AEGAQVIFFQKD 553 (1013)
Q Consensus 481 ~dg~V~FlG~~eDi~~lLa--aADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG----i~EiI-~dG~tGlLv~p~ 553 (1013)
.+ ||....... ...+|. .+++||.- |-..++.||+.+|+|.|+....+ +...+ +....|..++..
T Consensus 345 ~~-Nv~~~~~~P-q~~lL~hp~~~~fItH------GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~ 416 (473)
T d2pq6a1 345 AD-RGLIASWCP-QDKVLNHPSIGGFLTH------CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN 416 (473)
T ss_dssp TT-TEEEESCCC-HHHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred CC-CEEEEEECC-HHHHHCCCCCCEEEEC------CCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 47-668863088-7999647767599956------884089999985999896564112188999999971737861897
Q ss_pred -CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf -9999999999999596107999999999999999
Q 001781 554 -NPEGLSRAFSLFISNGKLSKFARTVASAGRLHAK 587 (1013)
Q Consensus 554 -D~eeLAeAI~~LL~d~elR~~~~~Mg~aARe~ae 587 (1013)
+.++++++|.++++|+.- +++.+++++..+
T Consensus 417 ~t~~~l~~ai~~vl~d~~~----~~~r~~a~~l~~ 447 (473)
T d2pq6a1 417 VKREELAKLINEVIAGDKG----KKMKQKAMELKK 447 (473)
T ss_dssp CCHHHHHHHHHHHHTSHHH----HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCHH----HHHHHHHHHHHH
T ss_conf 3899999999999769768----999999999999
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.04 E-value=0.01 Score=34.25 Aligned_cols=90 Identities=14% Similarity=0.039 Sum_probs=61.5
Q ss_pred CEEECCCCCCHHHHH--HHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC----CHHHHC-CCCEEEEECCC--C
Q ss_conf 099958801099999--77367899257887896389999999199899839887----023121-59849999489--9
Q 001781 484 SVRHYGFNGDVNGVL--LMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYVA-EGAQVIFFQKD--N 554 (1013)
Q Consensus 484 ~V~FlG~~eDi~~lL--aaADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG----i~EiI~-dG~tGlLv~p~--D 554 (1013)
+|........ ..+| ..+++||.- |-..++.||+.+|+|+|+....+ ....+. ....|..++.. +
T Consensus 320 nv~~~~~~pq-~~lL~hp~~~~fItH------GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t 392 (450)
T d2c1xa1 320 YGMVVPWAPQ-AEVLAHEAVGAFVTH------CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 392 (450)
T ss_dssp TEEEESCCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred CCCCCCCCCH-HHHHCCCCEEEEECC------CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCC
T ss_conf 4015546783-766526741699706------883079999985999896354000089999999970908980389838
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 999999999999596107999999999999
Q 001781 555 PEGLSRAFSLFISNGKLSKFARTVASAGRL 584 (1013)
Q Consensus 555 ~eeLAeAI~~LL~d~elR~~~~~Mg~aARe 584 (1013)
.+++.++|.++++|+.. +++++++++
T Consensus 393 ~~~l~~ai~~vL~d~~y----~~~~~r~~~ 418 (450)
T d2c1xa1 393 KSGLMSCFDQILSQEKG----KKLRENLRA 418 (450)
T ss_dssp HHHHHHHHHHHHHSHHH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHH----HHHHHHHHH
T ss_conf 99999999999619479----999999999
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=94.84 E-value=0.11 Score=27.06 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=65.1
Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 67999997099999689999824777576656899999999998999842056889909999982899652899999999
Q 001781 397 EKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVAS 476 (1013)
Q Consensus 397 ~~~~lR~~lgi~~d~~vIL~VGRl~~yk~~~Kg~dlLLeAla~Ll~~~~~lk~~gpdikFLVIvG~G~e~Y~e~Lkelak 476 (1013)
........+++..++..|+.............-.+...+.+..+.++ +.+ ++++|...+. +..+.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~---------~~~-ivl~g~~~e~--~~~~~~~~ 233 (348)
T d1pswa_ 166 EKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE---------GYQ-VVLFGSAKDH--EAGNEILA 233 (348)
T ss_dssp HHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT---------TCE-EEECCCGGGH--HHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHC---------CCC-CCCCCCCCHH--HHHHHHHH
T ss_conf 99999987333557876995355322322164467776667777644---------874-2224441059--99888887
Q ss_pred HCC---CCCCCEEECC--CCCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEC
Q ss_conf 909---9997099958--8010999997736789925788789638999999919989983
Q 001781 477 RLG---LLEHSVRHYG--FNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITP 532 (1013)
Q Consensus 477 eLg---L~dg~V~FlG--~~eDi~~lLaaADIfVlPS~~EEEGFGivILEAMA~GlPVIAS 532 (1013)
.+. ... -+.+.| ...++..++..||++|.+.. ..+--|.++|+|+|+-
T Consensus 234 ~~~~~~~~~-~~~l~g~~sl~el~~li~~a~l~I~~Dt-------g~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 234 ALNTEQQAW-CRNLAGETQLDQAVILIAACKAIVTNDS-------GLMHVAAALNRPLVAL 286 (348)
T ss_dssp TSCHHHHTT-EEECTTTSCHHHHHHHHHTSSEEEEESS-------HHHHHHHHTTCCEEEE
T ss_pred HHHCCCCCC-CCCCCCCCCHHHHHHHHHCCEEEEECCC-------CHHHHHHHCCCCEEEE
T ss_conf 631014653-3355577437889998743305761586-------0889999829998999
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.16 E-value=0.15 Score=26.01 Aligned_cols=115 Identities=10% Similarity=-0.021 Sum_probs=69.8
Q ss_pred CCCCCEEECCCCCCHHHHHH--HCCEEEECCCCCCCCCCHHHHHHHHHCCCEEECCCCC----CHHHH-CCCCEEEEECC
Q ss_conf 99970999588010999997--7367899257887896389999999199899839887----02312-15984999948
Q 001781 480 LLEHSVRHYGFNGDVNGVLL--MADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPI----IKEYV-AEGAQVIFFQK 552 (1013)
Q Consensus 480 L~dg~V~FlG~~eDi~~lLa--aADIfVlPS~~EEEGFGivILEAMA~GlPVIASdvgG----i~EiI-~dG~tGlLv~p 552 (1013)
..+ +|.+.+..... .+|+ .+++||.- |-..++.||+.+|+|+|+...-+ ....+ +.-..|..+..
T Consensus 332 ~~~-nv~~~~w~Pq~-~lL~hp~~~~fVtH------GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~ 403 (471)
T d2vcha1 332 KKR-GFVIPFWAPQA-QVLAHPSTGGFLTH------CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA 403 (471)
T ss_dssp TTT-EEEEESCCCHH-HHHHSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCC
T ss_pred CCC-CEEECCCCCHH-HHHCCCCCCEEEEC------CCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEEEEC
T ss_conf 678-75521657899-98657657889706------88428999998599989714401228899999997204899724
Q ss_pred C-----CHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHH
Q ss_conf 9-----99999999999995961---079999999999999996-06999999999999
Q 001781 553 D-----NPEGLSRAFSLFISNGK---LSKFARTVASAGRLHAKN-MLALDCVTRYARIL 602 (1013)
Q Consensus 553 ~-----D~eeLAeAI~~LL~d~e---lR~~~~~Mg~aARe~ae~-fsse~~i~~y~~Ly 602 (1013)
. +.+++.++|.+++++++ .|+...++++.+++..++ =++.+.++.+.+..
T Consensus 404 ~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~ 462 (471)
T d2vcha1 404 GDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 462 (471)
T ss_dssp CTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 87886979999999999967947899999999999999998717997899999999999
|