Citrus Sinensis ID: 001793

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010--

MGEKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

cccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc

ccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccEEEEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHEccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEcc

MGEKLEQQLKEVgskletppstkDGLVKLLKQAATCLselnqsppasiLEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEitritapeapysddvLKDIFQLIVGTfsglkdtggpsfgRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAvasddhpesvLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSsmsgdsrpghshidyheviydvyrcspqilsgvvpyltgeLLTDQLDTRLKAVGLVGdlfavpgsanneqFHSVFSEFLKRLTDRIVAVRMSVLEHVKSclltdpsradaPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCclrnfngsinqnefewipgkilrclydkdfgsdtiesvlcgslfptgfsvkdRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQmhqdgdapeIQKKILFCFRVmsrsfaepakAEENFLILDQLKDANVWKILMNLLdsntsfdqaftGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILArfsplllggTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGciaqtampvfeTRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKsylpvkdahirpGIDDLLGILKSMLsygemsediesssvDKAHLRLASAKAVLRLSrqwdhkipvdvfhltlrtpeisfpQAKKLFLSKVHQYVKDRLLDAKYACAFLFgiteskspefeEEKQNLADIIQMHHQMKARQIsvqsdansfatypeyIIPYLVHtfahhscpdideckdvkAFELVYWYEFRCLECTFMSYYTLISC

MGEKLEQQLKevgskletppstkDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITritapeapysdDVLKDIFQLIVGTfsglkdtggpsfGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSclltdpsradAPQILTALCDRLLDFDENVRKQVVAVICDVAChalnsipvetvklvaerlrdksvlvkrytmerlADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLfptgfsvkdrvrHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALaaitkddglksLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIkskilrcsnkirndtkacwddrsELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

MGEKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTeeelvnllkeeneIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETReseieefikskiLRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

**************************VKLLKQAATCLS********SILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVS**********SHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILE*************************EIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTI****************RLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSY*********************AKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGIT****************IIQ*********ISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLI**

***********************DGLVKLLKQAATCLSEL***********MQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSG*****HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLS*****************LFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEV***********MQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRC***********WDDRSELCLLKIYGIKTLVKSYLPV******PGIDDLLGILKSMLSYGEMSE**ESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMH*******************YPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

*******************PSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEM*********DKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESK********QNLADIIQMHH**********SDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

***********VGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSN*****TKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MGEKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIExxxxxxxxxxxxxxxxxxxxxxxxRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTFMSYYTLISC

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1012	2.2.26 [Sep-21-2011]
Q5F3U9		1412	Sister chromatid cohesion	yes	no	0.943	0.676	0.251	9e-66
Q9NTI5		1447	Sister chromatid cohesion	yes	no	0.943	0.659	0.252	4e-65
Q4VA53		1446	Sister chromatid cohesion	yes	no	0.943	0.660	0.251	5e-65
Q6TRW4		1447	Sister chromatid cohesion	yes	no	0.943	0.659	0.251	9e-65
Q5U241		1464	Sister chromatid cohesion	N/A	no	0.942	0.651	0.249	4e-64
Q498H0		1448	Sister chromatid cohesion	N/A	no	0.942	0.658	0.251	2e-63
Q29RF7		1337	Sister chromatid cohesion	no	no	0.956	0.724	0.247	1e-61
A4L9P7		1333	Sister chromatid cohesion	no	no	0.956	0.726	0.248	1e-61
Q5F3V3		1330	Sister chromatid cohesion	no	no	0.957	0.728	0.249	4e-61
A1L1F4		1320	Sister chromatid cohesion	no	no	0.913	0.7	0.243	1e-60

>sp\|Q5F3U9\|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3	Back alignment and function desciption

 Score =  252 bits (644), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 257/1023 (25%), Positives = 457/1023 (44%), Gaps = 68/1023 (6%)

Query: 9    LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
            +KE+  K+     +K+ +V+ LK       +++Q       E  + +LN    +     L
Sbjct: 19   VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69

Query: 66   KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
            KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF  I     GL+DT  P F R  
Sbjct: 70   KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129

Query: 125  VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
             +LE +A  +S  +  +LE  +E+  ++Y T F+V ++ H + V   M  +M  ++ E +
Sbjct: 130  YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189

Query: 184  DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
             + ++LL  +L  L    +N N  A  LA  ++++ A  +E  I  F     M G +   
Sbjct: 190  TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249

Query: 240  HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
                   ++I ++Y     +L  V+P L  +L ++  + RL+ V L+  +F    S    
Sbjct: 250  DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309

Query: 300  QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
            Q   ++  +L R  D  V +R+  ++    CL+  P  A    +   L  R  D +E +R
Sbjct: 310  QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367

Query: 360  KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
              V+  I   A   L  +    +  V ER  DK   V++  M  LA I++   L++  G 
Sbjct: 368  HDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSEAGK 427

Query: 420  INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
                +  WI  K+L   Y         +E +    + P      +R++    +++  D  
Sbjct: 428  EAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYLYATLDSN 487

Query: 479  EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
             +KAL ++ + +  L+ +++  + L +Q   D  +  I  K++    V++R+  +P KA+
Sbjct: 488  AVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVM----VITRNLPDPGKAQ 543

Query: 538  ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
            +      Q+   D  +   L  L+    S  QA     ++ K LG  K     FL  +  
Sbjct: 544  DFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603

Query: 595  ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
               + + +  + E +  ++ +V            +     Q +++ +++L +L+   P+ 
Sbjct: 604  LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663

Query: 643  LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
                E  E L+  LK ++E + E  L +    G  I E      S++  +L     +G  
Sbjct: 664  FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKKGPP 723

Query: 701  RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
            RQAKYA+H + AI      +  + +++ L   L+     HL   L ++G IA  A   F 
Sbjct: 724  RQAKYAIHCINAIFSSKETQ-FAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQFA 782

Query: 759  TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
               +S +  FI   +L         T   W   ++ S   L+KI  IK +V+  L +K+ 
Sbjct: 783  APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMKNN 842

Query: 815  HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
            H + G   L  +   + S G+++E  + S  D + LRLA+  A+++L+++  +   I ++
Sbjct: 843  HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902

Query: 873  VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE-- 928
             + L          Q +++F  K+H+ +    L  +Y   CA       +K P  E    
Sbjct: 903  QYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRAH 957

Query: 929  -KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHH----SCPDIDECK 983
             +Q L   I +  +   +  +V     S    PEY++PY +H  AH        DI++ K
Sbjct: 958  ARQCLVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHDPDYVKVQDIEQLK 1015

Query: 984  DVK 986
            D+K
Sbjct: 1016 DIK 1018

Plays a role in androgen-induced proliferative arrest. Required for maintenance of sister chromatid cohesion during mitosis.
Gallus gallus (taxid: 9031)

>sp\|Q9NTI5\|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens GN=PDS5B PE=1 SV=1	Back alignment and function description

>sp\|Q4VA53\|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus GN=Pds5b PE=1 SV=1	Back alignment and function description

>sp\|Q6TRW4\|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus GN=Pds5b PE=2 SV=2	Back alignment and function description

>sp\|Q5U241\|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis GN=pds5b-b PE=2 SV=2	Back alignment and function description

>sp\|Q498H0\|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis GN=pds5b-a PE=1 SV=1	Back alignment and function description

>sp\|Q29RF7\|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens GN=PDS5A PE=1 SV=1	Back alignment and function description

>sp\|A4L9P7\|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus GN=Pds5a PE=2 SV=1	Back alignment and function description

>sp\|Q5F3V3\|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus GN=PDS5A PE=2 SV=2	Back alignment and function description

>sp\|A1L1F4\|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio GN=pds5a PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1012
224139450		1417	predicted protein [Populus trichocarpa]	0.978	0.698	0.787	0.0
255585406		1735	androgen induced inhibitor of proliferat	0.980	0.571	0.792	0.0
147777785		1922	hypothetical protein VITISV_030148 [Viti	0.960	0.505	0.780	0.0
224089565		1411	predicted protein [Populus trichocarpa]	0.963	0.690	0.787	0.0
449443672		1692	PREDICTED: sister chromatid cohesion pro	0.980	0.586	0.748	0.0
356522079		1641	PREDICTED: sister chromatid cohesion pro	0.971	0.599	0.755	0.0
356564452		1642	PREDICTED: sister chromatid cohesion pro	0.971	0.598	0.753	0.0
297794445		1608	binding protein [Arabidopsis lyrata subs	0.980	0.616	0.705	0.0
186530158		1607	sister chromatid cohesion protein PDS5 [	0.980	0.617	0.702	0.0
356557993		1656	PREDICTED: sister chromatid cohesion pro	0.978	0.597	0.714	0.0

>gi\|224139450\|ref\|XP_002323118.1\| predicted protein [Populus trichocarpa] gi\|222867748\|gb\|EEF04879.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1629 bits (4219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 785/997 (78%), Positives = 890/997 (89%), Gaps = 7/997 (0%)

Query: 3   EKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQP 62
           +KLE++LKEVGSKLET PSTKDG+VKLLKQAATCLSE++QSPPAS+ E+MQPFL+AIV+P
Sbjct: 1   KKLEEKLKEVGSKLETLPSTKDGVVKLLKQAATCLSEMDQSPPASVSESMQPFLDAIVKP 60

Query: 63  VLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGR 122
            LLKHQD+DVKLLVATCICEITRITAPEAPYSDDVLKDIF LIVGTFSGL DTGGPSFGR
Sbjct: 61  ELLKHQDRDVKLLVATCICEITRITAPEAPYSDDVLKDIFHLIVGTFSGLSDTGGPSFGR 120

Query: 123 RVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEES 182
           RVVILETLAKYRSCVVMLDLEC++LVN+M+STFF VASDDH ESVLSSMQTIM+VL+EES
Sbjct: 121 RVVILETLAKYRSCVVMLDLECNDLVNKMFSTFFTVASDDHQESVLSSMQTIMVVLIEES 180

Query: 183 EDIQEDLLVILLSALGRNKND---TARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPG 239
           ED +EDLL+++LS LGRN++D   +AR+LAM VIE CAGKLEAGIKQFL+S MSGDSR  
Sbjct: 181 EDFREDLLLVILSVLGRNRSDISMSARKLAMKVIELCAGKLEAGIKQFLISLMSGDSRLA 240

Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
           +S IDYHEVIYDVYRC+PQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLF++PGSA  E
Sbjct: 241 NSKIDYHEVIYDVYRCAPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFSLPGSAITE 300

Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
            F  +FSEFLKRL+DR+V +RM VLE VK CLL++P RA+A QI++ALCDRLLD+DENVR
Sbjct: 301 AFQPIFSEFLKRLSDRVVTIRMCVLECVKGCLLSNPFRAEAAQIISALCDRLLDYDENVR 360

Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
           KQVV VICDVACHALNS+PVET+KLVAERLRDKS LVKRYTMER+A+IFR  C+++ +GS
Sbjct: 361 KQVVDVICDVACHALNSVPVETIKLVAERLRDKSQLVKRYTMERMAEIFRVYCVKSSDGS 420

Query: 420 INQNEFEWIPGKILRCLYDKDFGSD----TIESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
           IN  E++WIPG+ILRCLYDKDF  D    TIESVLCGSLF T F+VKDR ++WVRIFS  
Sbjct: 421 INPGEYDWIPGRILRCLYDKDFRQDFLAYTIESVLCGSLFQTEFAVKDRCKYWVRIFSVI 480

Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAK 535
           D++E+KALEKILEQKQRLQQEMQRYL LRQ HQD D PEIQKK+LFCFR+MSRSFAEPAK
Sbjct: 481 DKVEVKALEKILEQKQRLQQEMQRYLLLRQSHQDRDTPEIQKKVLFCFRIMSRSFAEPAK 540

Query: 536 AEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMK 595
           AEENF I+DQLKDAN+WKIL NLLD +T+F QA TGRDDLLKILG KHRLYDFLS+LSMK
Sbjct: 541 AEENFHIVDQLKDANIWKILTNLLDPSTTFHQACTGRDDLLKILGEKHRLYDFLSSLSMK 600

Query: 596 CSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLK 655
           CSYLLFNKEHVKEIL +V    S+ N  F +SCMD+L ILARFSPLLLGG+ EEL+N LK
Sbjct: 601 CSYLLFNKEHVKEILSDVNTHNSAGNMHFTRSCMDLLVILARFSPLLLGGSGEELINFLK 660

Query: 656 EENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITK 715
           ++NEIIKEG LHVLAKAGGTIREQLA +SS++DL+LERLCLEGSRRQAKYAVHALA ITK
Sbjct: 661 DDNEIIKEGALHVLAKAGGTIREQLAESSSAIDLILERLCLEGSRRQAKYAVHALATITK 720

Query: 716 DDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRC 775
           DDGLKSLSVLYKRLVDMLEEK HLPAVLQSLGCIAQ AMPVFETRE+EIE+FIK+KIL C
Sbjct: 721 DDGLKSLSVLYKRLVDMLEEKRHLPAVLQSLGCIAQAAMPVFETRENEIEKFIKNKILEC 780

Query: 776 SNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGE 835
           S+K  ++TKACWDD+SELCLLKIYGIKTLV SYLPVKD  +R GID  L IL+++L +GE
Sbjct: 781 SSKSEDNTKACWDDKSELCLLKIYGIKTLVNSYLPVKDVQLRRGIDSHLEILRNILLFGE 840

Query: 836 MSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSK 895
           +S+DIESSSVDKAHLRLASAKAVLRLS+ WDHKI VD+ HLTLRTPEI+FPQA+KLFLSK
Sbjct: 841 ISKDIESSSVDKAHLRLASAKAVLRLSKHWDHKISVDLLHLTLRTPEIAFPQARKLFLSK 900

Query: 896 VHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANS 955
           VHQY+KDR+LD KYACAFLF +T SK  +FEEE QNLADIIQM  Q K R + VQSDAN 
Sbjct: 901 VHQYIKDRVLDPKYACAFLFNMTGSKPLDFEEENQNLADIIQMLQQAKTRHVPVQSDANP 960

Query: 956 FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 992
            + YPEYI+PYLVH  AH SCP++DECKD+KAFE +Y
Sbjct: 961 LSVYPEYILPYLVHALAHQSCPNVDECKDIKAFEPIY 997

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255585406\|ref\|XP_002533398.1\| androgen induced inhibitor of proliferation (as3) / pds5, putative [Ricinus communis] gi\|223526757\|gb\|EEF28984.1\| androgen induced inhibitor of proliferation (as3) / pds5, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|147777785\|emb\|CAN75734.1\| hypothetical protein VITISV_030148 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224089565\|ref\|XP_002308759.1\| predicted protein [Populus trichocarpa] gi\|222854735\|gb\|EEE92282.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449443672\|ref\|XP_004139601.1\| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356522079\|ref\|XP_003529677.1\| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max]	Back alignment and taxonomy information

>gi\|356564452\|ref\|XP_003550468.1\| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max]	Back alignment and taxonomy information

>gi\|297794445\|ref\|XP_002865107.1\| binding protein [Arabidopsis lyrata subsp. lyrata] gi\|297310942\|gb\|EFH41366.1\| binding protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|186530158\|ref\|NP_001119390.1\| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gi\|332008170\|gb\|AED95553.1\| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356557993\|ref\|XP_003547294.1\| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1012
TAIR\|locus:2169058		1607	AT5G47690 [Arabidopsis thalian	0.980	0.617	0.686	0.0
RGD\|1307094		1333	Pds5a "PDS5, regulator of cohe	0.726	0.551	0.249	3e-63
UNIPROTKB\|Q29RF7		1337	PDS5A "Sister chromatid cohesi	0.726	0.549	0.249	4.9e-63
UNIPROTKB\|E2R7R4		1337	PDS5A "Uncharacterized protein	0.726	0.549	0.249	6.4e-63
UNIPROTKB\|F1N7G8		1449	PDS5B "Uncharacterized protein	0.547	0.382	0.268	4.3e-62
UNIPROTKB\|Q5F3U9		1412	PDS5B "Sister chromatid cohesi	0.547	0.392	0.270	8.1e-62
UNIPROTKB\|F1P3B8		1446	PDS5B "Sister chromatid cohesi	0.547	0.383	0.270	9.2e-62
UNIPROTKB\|F1Q0Z0		1447	PDS5B "Uncharacterized protein	0.547	0.382	0.268	1.8e-61
UNIPROTKB\|Q9NTI5		1447	PDS5B "Sister chromatid cohesi	0.547	0.382	0.268	2.4e-61
MGI\|MGI:2140945		1446	Pds5b "PDS5, regulator of cohe	0.547	0.383	0.267	3e-61

TAIR\|locus:2169058 AT5G47690 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3584 (1266.7 bits), Expect = 0., P = 0.
 Identities = 683/995 (68%), Positives = 823/995 (82%)

Query:     1 MGEKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIV 60
             M +K E+QLKE+GSKL+  P +KD L+KLLK+AA CLSEL QSPP ++L+++QPFL+A++
Sbjct:     1 MAQKPEEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVI 60

Query:    61 QPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSF 120
             +P +L HQDKDVKLLVA+C+ EITRITAPEAPYSD+++KDIFQLIV  F+GL D  GPSF
Sbjct:    61 KPEILNHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSF 120

Query:   121 GRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLE 180
             GRRV+ILET+AKYRSCVVMLDLECD+LV E+++TF  VA DDHPE V SSMQ IMIVLLE
Sbjct:   121 GRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLE 180

Query:   181 ESEDIQEDLLVILLSALGRNKNDT---ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSR 237
             ESED+QE LL+ILLS LGRN++D    ARRLAM VIE CA K+E+ IKQFL+SSMSGDSR
Sbjct:   181 ESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSR 240

Query:   238 PGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
                S IDYHEVIYD+YRC+PQ LSGV PYLTGELL D+L+TRLK VGLVG+LF++PG   
Sbjct:   241 FSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLETRLKVVGLVGELFSLPGRVI 300

Query:   298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDEN 357
             +E+F S+F EFLKRLTDR+V VRM++L+H+K CLL+DP RA+A QI++ALCDRLLD+DEN
Sbjct:   301 SEEFDSIFLEFLKRLTDRVVEVRMAILDHIKDCLLSDPLRAEASQIISALCDRLLDYDEN 360

Query:   358 VRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFN 417
             +RKQVVAVICDV+  AL SIPV+T+KLVAERLRDK++LVK YTMERL ++FR  CLR  +
Sbjct:   361 IRKQVVAVICDVSVSALTSIPVDTMKLVAERLRDKAILVKTYTMERLTELFRVYCLRCAD 420

Query:   418 GSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDR 477
             G ++  +F WIPGKILRCLYDKDF SDTIE +LC SLFP+ FSV+D+V+HW++IFSGFD+
Sbjct:   421 GKVDTGDFNWIPGKILRCLYDKDFRSDTIEYILCSSLFPSDFSVRDKVKHWIQIFSGFDK 480

Query:   478 IEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
             +E KA EKILEQ+QR+QQEMQRYLS++Q  Q  DAPEIQKKILF FRVMSR+F++P K E
Sbjct:   481 VETKAFEKILEQRQRIQQEMQRYLSIKQTQQTADAPEIQKKILFGFRVMSRAFSDPPKTE 540

Query:   538 ENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCS 597
             +NFLILDQLKDAN+WKIL NLLD NTS  QA   RDD+LKIL  KH LYDFLSTLS+KCS
Sbjct:   541 QNFLILDQLKDANIWKILTNLLDPNTSITQASRIRDDMLKILSEKHSLYDFLSTLSIKCS 600

Query:   598 YLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTXXXXXXXXXXX 657
             YLLF+KE+VKEIL EV+ +KSS N   +Q CMD LG+LA F P L  G            
Sbjct:   601 YLLFSKEYVKEILAEVSVRKSSKNTLGIQPCMDFLGLLACFCPSLFDGAEEELISFLKDD 660

Query:   658 XXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDD 717
               ++KEG L +LAKAGGTIRE L   +SSVDLLLER+C+EG+R+QAKYAVHALA+ITKDD
Sbjct:   661 DEMMKEGTLKILAKAGGTIRENLIVLASSVDLLLERICVEGNRKQAKYAVHALASITKDD 720

Query:   718 GLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSN 777
             GLKSLSVLYKRLVDMLE+K + PAVLQ LGCIAQ AMPV+ETR            L+  +
Sbjct:   721 GLKSLSVLYKRLVDMLEDKRYQPAVLQCLGCIAQIAMPVYETRESEVVEFIRSKILKLKS 780

Query:   778 KIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMS 837
             +  +D K  WDD+SE+C LKIYGIKTLVKSYLP KDA +R G+DDLLGILK++LS+GE+S
Sbjct:   781 ETVDDKKLSWDDKSEICQLKIYGIKTLVKSYLPFKDAQLRAGVDDLLGILKNILSFGEVS 840

Query:   838 EDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVH 897
             ED+ESSSVDKAHLRLA+AKAVLRLSR WD KIP+++FHLTL+TPEI FP AKK+FL KVH
Sbjct:   841 EDLESSSVDKAHLRLAAAKAVLRLSRHWDDKIPIEIFHLTLKTPEIPFPTAKKIFLGKVH 900

Query:   898 QYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFA 957
             QYVKDR+L+ KYAC+FLF IT S   E EE+K NLADIIQ  +Q K R+IS Q+DANS  
Sbjct:   901 QYVKDRVLEMKYACSFLFDITGSNVLESEEDKHNLADIIQHSYQTKVRKISAQTDANSVT 960

Query:   958 TYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 992
              YP +I+PYLVH  AHHSCPD+++CKDVK +E++Y
Sbjct:   961 LYPHHILPYLVHALAHHSCPDVEKCKDVKEYEMIY 995

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA;IDA

GO:0007067 "mitosis" evidence=RCA

RGD\|1307094 Pds5a "PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q29RF7 PDS5A "Sister chromatid cohesion protein PDS5 homolog A" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R7R4 PDS5A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N7G8 PDS5B "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5F3U9 PDS5B "Sister chromatid cohesion protein PDS5 homolog B" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P3B8 PDS5B "Sister chromatid cohesion protein PDS5 homolog B" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1Q0Z0 PDS5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9NTI5 PDS5B "Sister chromatid cohesion protein PDS5 homolog B" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:2140945 Pds5b "PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1012
KOG1525		1266	consensus Sister chromatid cohesion complex Cohesi	100.0
KOG1525		1266	consensus Sister chromatid cohesion complex Cohesi	99.07
PTZ00429		746	beta-adaptin; Provisional	98.71
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	98.56
PTZ00429		746	beta-adaptin; Provisional	98.19
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	98.14
PRK09687		280	putative lyase; Provisional	97.81
KOG1020		1692	consensus Sister chromatid cohesion protein SCC2/N	97.7
PRK09687		280	putative lyase; Provisional	97.69
KOG1020		1692	consensus Sister chromatid cohesion protein SCC2/N	97.6
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	97.37
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	97.34
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	97.16
PF12717		178	Cnd1: non-SMC mitotic condensation complex subunit	97.01
PF13646		88	HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I	96.97
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	96.77
KOG1062		866	consensus Vesicle coat complex AP-1, gamma subunit	96.67
KOG1242		569	consensus Protein containing adaptin N-terminal re	96.62
KOG1824		1233	consensus TATA-binding protein-interacting protein	96.61
KOG0212		675	consensus Uncharacterized conserved protein [Funct	96.55
PF10508		503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	96.48
PF12348		228	CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi	96.35
KOG1824		1233	consensus TATA-binding protein-interacting protein	96.33
PF13646		88	HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I	96.15
KOG2025		892	consensus Chromosome condensation complex Condensi	96.11
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	95.86
KOG1061		734	consensus Vesicle coat complex AP-1/AP-2/AP-4, bet	95.85
PF14500		262	MMS19_N: Dos2-interacting transcription regulator	95.79
PLN03200		2102	cellulose synthase-interactive protein; Provisiona	95.3
KOG1949		1005	consensus Uncharacterized conserved protein [Funct	95.19
PF12755		97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	95.08
KOG0213		1172	consensus Splicing factor 3b, subunit 1 [RNA proce	94.86
PF12348		228	CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi	94.63
cd00020		120	ARM Armadillo/beta-catenin-like repeats. An approx	94.62
COG5218		885	YCG1 Chromosome condensation complex Condensin, su	94.6
COG5096		757	Vesicle coat complex, various subunits [Intracellu	94.59
PF12719		298	Cnd3: Nuclear condensing complex subunits, C-term	94.49
KOG1060		968	consensus Vesicle coat complex AP-3, beta subunit	94.48
PF12717		178	Cnd1: non-SMC mitotic condensation complex subunit	94.38
KOG1949		1005	consensus Uncharacterized conserved protein [Funct	94.34
PF02985		31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	94.18
PLN03200		2102	cellulose synthase-interactive protein; Provisiona	94.0
KOG1062		866	consensus Vesicle coat complex AP-1, gamma subunit	93.8
PF12460		415	MMS19_C: RNAPII transcription regulator C-terminal	93.67
PF13513		55	HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O	93.61
PF10508		503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	93.43
KOG0414		1251	consensus Chromosome condensation complex Condensi	93.21
KOG0414		1251	consensus Chromosome condensation complex Condensi	93.06
KOG2011		1048	consensus Sister chromatid cohesion complex Cohesi	92.98
PF10363		92	DUF2435: Protein of unknown function (DUF2435)	92.66
PF13513		55	HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O	92.33
COG5240		898	SEC21 Vesicle coat complex COPI, gamma subunit [In	92.01
KOG2011		1048	consensus Sister chromatid cohesion complex Cohesi	91.92
PF12755		97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	91.69
cd00020		120	ARM Armadillo/beta-catenin-like repeats. An approx	91.5
KOG2259		823	consensus Uncharacterized conserved protein [Funct	91.47
COG5098		1128	Chromosome condensation complex Condensin, subunit	91.43
PF12765		42	Cohesin_HEAT: HEAT repeat associated with sister c	91.37
COG5098		1128	Chromosome condensation complex Condensin, subunit	90.99
PF13001		501	Ecm29: Proteasome stabiliser; InterPro: IPR024372	90.94
KOG0915		1702	consensus Uncharacterized conserved protein [Funct	90.02
TIGR02270		410	conserved hypothetical protein. Members are found	89.95
PF12719		298	Cnd3: Nuclear condensing complex subunits, C-term	89.8
TIGR02270		410	conserved hypothetical protein. Members are found	89.47
KOG2259		823	consensus Uncharacterized conserved protein [Funct	89.29
KOG1078		865	consensus Vesicle coat complex COPI, gamma subunit	88.76
KOG1820		815	consensus Microtubule-associated protein [Cytoskel	88.74
KOG2956		516	consensus CLIP-associating protein [General functi	87.82
KOG1967		1030	consensus DNA repair/transcription protein Mms19 [	87.75
COG5096		757	Vesicle coat complex, various subunits [Intracellu	86.93
PF01347		618	Vitellogenin_N: Lipoprotein amino terminal region;	86.5
KOG1248		1176	consensus Uncharacterized conserved protein [Funct	85.31
PF12231		372	Rif1_N: Rap1-interacting factor 1 N terminal; Inte	84.74
COG1413		335	FOG: HEAT repeat [Energy production and conversion	83.38
PF14676		158	FANCI_S2: FANCI solenoid 2; PDB: 3S51_A 3S4Z_A 3S4	82.98
smart00638		574	LPD_N Lipoprotein N-terminal Domain.	82.46
PF02985		31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	81.79
COG1413		335	FOG: HEAT repeat [Energy production and conversion	81.32
KOG1060		968	consensus Vesicle coat complex AP-3, beta subunit	81.31
KOG0392		1549	consensus SNF2 family DNA-dependent ATPase domain-	80.25
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	80.11

>KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

Probab=100.00  E-value=2.4e-132  Score=1230.99  Aligned_cols=978  Identities=31%  Similarity=0.481  Sum_probs=835.4

Q ss_pred             HhcccCCCCCChHHHHHHHHHHHHHHhhcCCCCchhhHHhHHHHHHHhcchhhhcCCCcchHHHHHHHHHHHHhhcCCCC
Q 001793           12 VGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEA   91 (1012)
Q Consensus        12 ~g~kl~~~~~~~~~Ll~rL~~l~~~L~~~~Q~~~~~~~~~l~~~~~~L~~~~lL~h~d~~Vr~~~acCl~dilRi~APda   91 (1012)
                      -|-+....|++++||++||++|+++|++++|++  .+.+++.|++.+|+++.||+|+|+|||+|||||+|||||||||||
T Consensus         8 ~g~~~~~~~~s~~ell~rLk~l~~~l~~~~qd~--~~~~~~~pl~~~l~~~~~L~h~d~dvrllvacCvseilRi~aPea   85 (1266)
T KOG1525|consen    8 PGCLTSLNPISKDELLKRLKKLANCLASLDQDN--LDLASLLPLADHLIKDFLLKHKDKDVRLLVACCVSEILRIYAPEA   85 (1266)
T ss_pred             CCCccccCcccHHHHHHHHHHHHHHHhhcccCc--hhHHHHHHHHHHHhhHHHhcCCCcChhHHHHHHHHHHHHHhCCCC
Confidence            455566678999999999999999999999996  689999999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHhccCCCCCCCCchhhHHHHHHHHHhhhhhhhhccCC-ccHHHHHHHHHHHHhhcCCChhcHHHH
Q 001793           92 PYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSS  170 (1012)
Q Consensus        92 Py~~~~lkdIf~l~~~~~~~L~d~~~~~~~~~~~lLe~la~vks~vl~~dl~-~~~li~~lF~~~~~~v~~~~~~~v~~~  170 (1012)
                      ||++.||+|||++|++||.||+|+.||||.||+||||+|+.|| ++++.+++ |++++.++|++||++++.+|+++|.+ 
T Consensus        86 Py~~~~lkdIf~~~~~q~~gL~d~~sp~f~r~~~lletl~~~k-~~l~~~l~d~~e~~~~~f~~f~d~~~~~~~~~v~~-  163 (1266)
T KOG1525|consen   86 PYTDEQLKDIFQLILSQFSGLGDVESPYFKRYFYLLETLAKVK-FCLLMLLEDCQELVHELFRTFFDLARKGHPKKVFN-  163 (1266)
T ss_pred             CCcHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhH-HHheeeccchHHHHHHHHHHHHHHHhccccHHHHH-
Confidence            9999999999999999999999999999999999999999999 55555554 99999999999999999999999999 


Q ss_pred             HHHHHHHHhcccccccHHHHHHHHHhhcCCCC---hHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcCCC-CCCCCcchHH
Q 001793          171 MQTIMIVLLEESEDIQEDLLVILLSALGRNKN---DTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDS-RPGHSHIDYH  246 (1012)
Q Consensus       171 m~~Il~~vI~E~~~v~~~~ld~il~~~~~~~~---~~a~~la~~v~~~~~~~l~~~i~~~f~~~l~~~~-~~~~~~~~~h  246 (1012)
                      |.+||+.+|+|.|.||.++|++||.+|.+++.   ..|+++|.++++.|++.+++.+++||++.+.++. ..+....++|
T Consensus       164 ~~~i~~~li~e~d~v~~e~L~~ll~~lv~~~~~~~~~a~~la~~li~~~a~~~~~~i~~f~~~~~~~~~s~~~~~~~~~h  243 (1266)
T KOG1525|consen  164 MLDIAIMLITEEDTVQSELLDVLLENLVKPGRDTIKEADKLASDLIERCADNLEDTIANFLNSCLTEYKSRQSSLKIKYH  243 (1266)
T ss_pred             HHHHHHHHHHhhccchHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHhhhhhchhHHHHHHHHHhhccccccchhhHHH
Confidence            99999999999999999999999999976543   3899999999999999999999999999887654 4455677899


Q ss_pred             HHHHHHHhhCchhhhhhhhhhhccccCCChHHHHHHHHHHHHhhcCCCCChhhhcHHHHHHHHhcccCCChhHHHHHHHH
Q 001793          247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEH  326 (1012)
Q Consensus       247 ~li~el~~~~P~lL~~Vip~Le~eL~se~~~~R~~At~~lg~m~s~~~~~~~~~~~~~~~~fL~R~~D~s~~VR~~~v~~  326 (1012)
                      ++|++||+++|++|++|||||++||.+|++.+|+.||.++|+||+.+++.++.+|+++|.+|||||+|++++||++||++
T Consensus       244 e~i~~L~~~~p~ll~~vip~l~~eL~se~~~~Rl~a~~lvg~~~~~~~~~l~~~~~~~~~~fl~r~~D~~~~vR~~~v~~  323 (1266)
T KOG1525|consen  244 ELILELWRIAPQLLLAVIPQLEFELLSEQEEVRLKAVKLVGRMFSDKDSQLSETYDDLWSAFLGRFNDISVEVRMECVES  323 (1266)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhcchhhhcccchHHHHHHHHHhccCChhhhhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHhcCCCCCChhHHHHHHHHHcCCchhHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 001793          327 VKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLAD  406 (1012)
Q Consensus       327 ~~~il~~~~~~~~~~~i~~~l~~rL~D~DekVR~aaV~~i~~la~~~~~~v~~~~l~~l~eR~rDKk~~VR~~Ai~~L~~  406 (1012)
                      +++||.+||++.....+..+++.|..|+|++||..+|..+|+++.+.+..+|. +++.++||+||||+.||++||++|++
T Consensus       324 ~~~~l~~~~~~~~~~~~~~~l~~~~~D~~~rir~~v~i~~~~v~~~~l~~~~~-ll~~~~eR~rDKk~~VR~~Am~~Laq  402 (1266)
T KOG1525|consen  324 IKQCLLNNPSIAKASTILLALRERDLDEDVRVRTQVVIVACDVMKFKLVYIPL-LLKLVAERLRDKKIKVRKQAMNGLAQ  402 (1266)
T ss_pred             hHHHHhcCchhhhHHHHHHHHHhhcCChhhhheeeEEEEEeehhHhhhhhhHH-HHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            99999999998777788888988999999999999999999999999999999 99999999999999999999999999


Q ss_pred             HHHH-hhhhccCCCcchhhcccchHHHHhhhhccCCCch-hHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 001793          407 IFRG-CCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALE  484 (1012)
Q Consensus       407 lY~~-~~~~~~~~~~~~~~~~wIP~~iL~~~y~~d~~~~-~ve~vl~e~LlP~~~~~~~R~~~l~~l~~~lD~~~~ka~~  484 (1012)
                      +|+. |+...+.|...+..|.|||++||++||.|+.+.+ +||++++++|+|+++++++|+++|+++|+++|..+.++|.
T Consensus       403 lYk~~~~~~~~~~k~~t~~~swIp~kLL~~~y~~~~~~r~~vE~il~~~L~P~~l~~q~Rmk~l~~~l~~~D~~a~kaf~  482 (1266)
T KOG1525|consen  403 LYKNVYCLRSAGGKEITPPFSWIPDKLLHLYYENDLDDRLLVERILAEYLVPYPLSTQERMKHLYQLLAGLDLNAHKAFN  482 (1266)
T ss_pred             HHHHHHHhhccCcccccccccccchhHHhhHhhccccHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcccHhhhhHHH
Confidence            9997 4545566678889999999999999999987754 8999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHhh--ccHHHHHHHHHHhccC
Q 001793          485 KILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSN  562 (1012)
Q Consensus       485 ~il~~k~~l~~~~~~~l~~~~~~~~~~~~~~~~kl~~~i~~Ls~~fpd~~ka~~~l~kf~~l--~D~r~~~ll~~~~~~~  562 (1012)
                      .|+++|.++|.+++.|+.+++..+.++   ..+++...|..++..||||.+.....++|++.  .+..+...+..+.++.
T Consensus       483 ~i~~~q~~ls~~vr~~I~~~k~~~~d~---~~k~i~~~i~~i~~~lpD~~s~~~~~~~f~~~L~~~~~~~s~~~~L~~~~  559 (1266)
T KOG1525|consen  483 EILKRQSRLSEEVRDYITLSKTPNTDD---SMKKIFSKIVKISENLPDPSSRSYDSMKFADVLETLAKVRSCLVSLDSPS  559 (1266)
T ss_pred             HHHHHHHHHHHHHHHHhccccCCCccH---hHHHHHHHHHHHHHhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999999999999999987665433   77788888999999999999999999999763  6778889999999998


Q ss_pred             CCHHHHHHHHHHHHHHhcC----CCchHHHHHHHHHhhhcccccH-hHHHHHHHHHHhh-------ccchh--hhhHHHH
Q 001793          563 TSFDQAFTGRDDLLKILGA----KHRLYDFLSTLSMKCSYLLFNK-EHVKEILLEVAAQ-------KSSAN--AQFMQSC  628 (1012)
Q Consensus       563 ~~~~~~~~a~~ellkkl~~----~~~~~~~~~~Ll~R~s~~i~n~-s~V~~Ll~~~~~~-------~~~~~--~~~~~~a  628 (1012)
                      .+|++..-.+++.+.+++.    ++.+..+.+.+..|..++.++. +.+..+++....+       ...++  ......+
T Consensus       560 ~~C~~l~~~v~~~l~e~~~~~~s~nlF~~~~~~li~~I~~v~~di~~s~~~~ik~~~~~i~~~~~~l~e~v~~~~a~kl~  639 (1266)
T KOG1525|consen  560 ISCKELLITVKEILFELGRKKQSKNLFSSMEKELIERIAEVSLDILESISALIKLNNIVIAEVSLLLLEGVLSEKALKLK  639 (1266)
T ss_pred             hhHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHhcchhhhhHHHHHHHHhhhhhhHHHHHhhcccccchhhHHhHH
Confidence            8998776656666666654    3457788999999999988888 7777777644321       11111  1234567


Q ss_pred             HHHHHHHHhhCCcCccccH--HHHHHHHhhccccchHhHHHHHHHhccchHhhhhhccchHHHHHHHHhhcCChHHHHHH
Q 001793          629 MDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYA  706 (1012)
Q Consensus       629 ~~LL~~iS~~~P~lf~~~~--~~L~~~L~~~~~~~~~~~L~~L~~~~k~~~~~~~~~~~~~~~~L~~la~~Gtp~~AK~A  706 (1012)
                      ..++.++|.++|.+|....  ..++..+..+.+...+.+|+.+.+.|+......+...+.+.+.+.+++..|+|.+||+|
T Consensus       640 ~~lle~ls~~~~~~~~~s~~v~~i~~~~~~~~~~~~~~vLk~~~~~~~~~~~~~~si~~~~~~~~~~~~~~g~~~q~k~~  719 (1266)
T KOG1525|consen  640 KYLLEALSSIHPDLFKYSESVLSILEKLFSEPDVVAPVVLKKLESQGKKIEVEAPSILSTLSRVLAKKELSGTPEQAKLA  719 (1266)
T ss_pred             HHHHHHhhhcCcchhhhhHHHHHHHHHhccchhhhhHHHHHHHHhccccccccchhhhcchhhhhhHHHHcCCcchhHHH
Confidence            8899999999999998874  66666666555567788999998888544444455566789999999999999999999


Q ss_pred             HHHHHhhcCCCccchHHHHHHHHHHhhhhc-----CCCchHHHHHHHHHhhccccccc-chHHHHHHHHHhhhccccccC
Q 001793          707 VHALAAITKDDGLKSLSVLYKRLVDMLEEK-----THLPAVLQSLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIR  780 (1012)
Q Consensus       707 v~~L~~~~~~~~~~~~~~l~~~l~~~l~~~-----~~~~~~L~sL~~ia~~~p~~f~~-~~~~I~~fiik~iL~~~~~~~  780 (1012)
                      ++|+.++...+.. .+.+.++.+.+.+...     .++.+.+.+||+|+...|..|-+ ...++..||+|+++..++.++
T Consensus       720 ~~~i~~~~~s~~~-~l~q~~~~~~d~l~~~~~~~~e~~~~~i~~lgei~~~~p~~~~~~~k~~~~~~IvK~~~~~~~~~~  798 (1266)
T KOG1525|consen  720 KRCIKAILQSKFC-KLKQTFEEIKDNLLEDLTSELEGLRTPIVTLGEIFLDLPSQFLDPLKSDVAKFIVKKVLSNDDSPG  798 (1266)
T ss_pred             hhhhhHHhhhhhh-HHHHHhhhhHHHHhhhhhhhhhccccchhhhhhHhhhccHhhcchhhhhhHHHHHHHHhcCCCccc
Confidence            9999988776422 3445666777776433     49999999999999999955554 678899999999988888887


Q ss_pred             CC-CCCCCCCC----hhhHHHHHHHHHHHHHhhcCCCcccc--ccchHHHHHHHHHhh-ccCccccCCCCChhHHhhhhH
Q 001793          781 ND-TKACWDDR----SELCLLKIYGIKTLVKSYLPVKDAHI--RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRL  852 (1012)
Q Consensus       781 ~~-~~~~W~~~----~~~~~~Ki~aLK~lvn~l~~~~~~~~--~~~~~~~~~lL~~i~-~~Gel~~~~~t~~~~~srLRL  852 (1012)
                      +. ....|+..    +..+.+|..+++++++||++...+.-  +..+...+++|..++ +.|+...+..+|..+++++|+
T Consensus       799 e~~~~~~~~P~~~~~~p~~~~k~~a~~L~~~~l~~~~~d~~~~e~s~~~~~~~L~~ll~~~gdl~~~~~~~~~~~sklr~  878 (1266)
T KOG1525|consen  799 EKNKSKEWLPSDKLLSPNTSLKVLAIKLLVRRLLDLEEDKEKDELSTPRSFRLLSKLLNSEGDLTEQNRDPKSDQSKLRL  878 (1266)
T ss_pred             cccCccccCCcccccchhhhhHHHHHHHhhhhccccccCcchhhhcchhHHHHHHHHHhhcCCCCcccCCcchhhhhhhh
Confidence            65 56789873    34678899999999999999866421  111111566777765 899999999999999999999


Q ss_pred             HHHHHHHHhhhh--cCCCCCHHHHHHHhhcccCCchhHHHHHHHHHHHhHhcCCCchhhHHHHhhhhccCCCCchHH-HH
Q 001793          853 ASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEE-EK  929 (1012)
Q Consensus       853 ~Aa~~lLKLa~~--~~~~i~~~~~~l~~~~~qD~~~~VR~~Fl~KL~k~L~~~~l~~ry~~lf~~a~~~~~~~~~~~-~k  929 (1012)
                      .|+.+++|+|..  +..++++++|..+.+.++|++++||..|+.|+++++.+.++|.-|++.|.+++  ..+..... .+
T Consensus       879 ~a~~~ilKl~~~~~~~e~~~~~~~~~~~~~i~de~~~vR~~f~~kl~k~l~~i~lp~~~~a~~~l~~--~d~~~~~~~~~  956 (1266)
T KOG1525|consen  879 TAKITILKLASEKSYHEFINAEQYEKLILLISDECLQVRLVFLLKLHKGLSRIKLPLEYMAKFKLCA--PDVSKELLANK  956 (1266)
T ss_pred             hhhheeeecccccchhccCCHHHHHHHHHHhcCCchhHHHHHHHHccccccccccchhhhhHHHHhc--cchhhhhhhHH
Confidence            999999999976  57889999999888889999999999999999999999999999999998854  33211111 11


Q ss_pred             HhHHHHHHHHHHHHHhhhhhhcccCcccCchhHHHHHHHHhccCCCCCCCCccccHHHHHHHHHHHHHHHHhhH
Q 001793          930 QNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYWYEFRCLECTF 1003 (1012)
Q Consensus       930 ~~~~~~i~~~~~~~~r~~~~~s~~~~~~~~pE~~l~~LIhlLAHH~~pd~~~~~d~~~~~~~y~~~~~~~e~~~ 1003 (1012)
                      ....+-...+++.+.....+.++.. ....|||+.+|.+|++|||  |++...+|+..|..+-.++||++|+++
T Consensus       957 ~~~~t~~~~~~r~~t~~e~~~s~~~-~~~~~e~V~~~~~~~la~d--~~~~~~edv~~l~~~ke~~~~vl~~l~ 1027 (1266)
T KOG1525|consen  957 REEETKNSASRREQTKFERATSDGT-LAHLPEYVGSYVIHLLAHD--PDFVKAEDVDSLSDLKECLWFVLEDLD 1027 (1266)
T ss_pred             HHhhhhcchhhhhhhhhhhccCchh-hhhhhHHhhhhhhhhhccC--ccccccchhhhHHHHHHhHHHHHhhhh
Confidence            1112222222222222222222211 5678999999999999999  999999999999999999999999875

>KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>PRK09687 putative lyase; Provisional	Back alignment and domain information

>KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>PRK09687 putative lyase; Provisional	Back alignment and domain information

>KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1	Back alignment and domain information

>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only]	Back alignment and domain information

>KOG0212 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells	Back alignment and domain information

>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]	Back alignment and domain information

>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only]	Back alignment and domain information

>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A	Back alignment and domain information

>KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II	Back alignment and domain information

>PLN03200 cellulose synthase-interactive protein; Provisional	Back alignment and domain information

>KOG1949 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	Back alignment and domain information

>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification]	Back alignment and domain information

>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]	Back alignment and domain information

>cd00020 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning]	Back alignment and domain information

>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]	Back alignment and domain information

>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain	Back alignment and domain information

>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1	Back alignment and domain information

>KOG1949 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []	Back alignment and domain information

>PLN03200 cellulose synthase-interactive protein; Provisional	Back alignment and domain information

>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins	Back alignment and domain information

>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B	Back alignment and domain information

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells	Back alignment and domain information

>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2011 consensus Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF10363 DUF2435: Protein of unknown function (DUF2435)	Back alignment and domain information

>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B	Back alignment and domain information

>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG2011 consensus Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	Back alignment and domain information

>cd00020 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>KOG2259 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]	Back alignment and domain information

>PF12765 Cohesin_HEAT: HEAT repeat associated with sister chromatid cohesion	Back alignment and domain information

>COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]	Back alignment and domain information

>PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3	Back alignment and domain information

>KOG0915 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR02270 conserved hypothetical protein	Back alignment and domain information

>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain	Back alignment and domain information

>TIGR02270 conserved hypothetical protein	Back alignment and domain information

>KOG2259 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1820 consensus Microtubule-associated protein [Cytoskeleton]	Back alignment and domain information

>KOG2956 consensus CLIP-associating protein [General function prediction only]	Back alignment and domain information

>KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription]	Back alignment and domain information

>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]	Back alignment and domain information

>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 []	Back alignment and domain information

>KOG1248 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF12231 Rif1_N: Rap1-interacting factor 1 N terminal; InterPro: IPR022031 This domain family is found in eukaryotes, and is typically between 135 and 146 amino acids in length	Back alignment and domain information

>COG1413 FOG: HEAT repeat [Energy production and conversion]	Back alignment and domain information

>PF14676 FANCI_S2: FANCI solenoid 2; PDB: 3S51_A 3S4Z_A 3S4W_A	Back alignment and domain information

>smart00638 LPD_N Lipoprotein N-terminal Domain	Back alignment and domain information

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []	Back alignment and domain information

>COG1413 FOG: HEAT repeat [Energy production and conversion]	Back alignment and domain information

>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0392 consensus SNF2 family DNA-dependent ATPase domain-containing protein [Transcription]	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1012
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
1b3u_A		588	Protein (protein phosphatase PP2A); scaffold prote	1e-06
2db0_A		253	253AA long hypothetical protein; heat repeats, hel	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 80.7 bits (198), Expect = 2e-15
 Identities = 85/650 (13%), Positives = 195/650 (30%), Gaps = 212/650 (32%)

Query: 352 LDFDENVR----KQVVAV-----ICDVACHALNSIP--VETVKLVAERLRDKSVLVKRYT 400
           +DF+        K +++V     + +  C  +  +P  + + + +   +  K  +     
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL- 65

Query: 401 MERLADIFR---GCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPT 457
             RL           ++ F   + +  ++++   I      +     T   +        
Sbjct: 66  --RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT--EQRQPSMMTRMYI-------- 113

Query: 458 GFSVKDRVRHWVRIFSGFD--RIE-MKALEKILEQ----------------KQ------- 491
               +DR+ +  ++F+ ++  R++    L + L +                K        
Sbjct: 114 --EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171

Query: 492 ---RLQQEMQR---YLSLRQMHQDGDAPEIQKKILFCFRVM-------SRSFAEPAKAEE 538
              ++Q +M     +L+L+  +      E+ +K    +++          S     +   
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK--LLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 539 ------NF----------LILDQLKDANVW-------KILMNLLDSNTSFDQAFTGRDDL 575
                             L+L  +++A  W       KIL+      T+  +  T   D 
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL------TTRFKQVT---DF 280

Query: 576 LKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGIL 635
           L      H        +S+    +    + VK +LL+    +     + + +        
Sbjct: 281 LSAATTTH--------ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT------- 325

Query: 636 ARFSPLLLGGTEEEL-------------------------VNLLK--------------E 656
              +P  L    E +                         +N+L+               
Sbjct: 326 ---NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 657 ENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKD 716
            +  I   +L ++          +      V+ L +   +E   +++  ++ ++    K 
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMV-----VVNKLHKYSLVEKQPKESTISIPSIYLELKV 437

Query: 717 DGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTA-----------MPVFETRESEIE 765
             L++   L++ +VD      ++P    S   I               +   E  E  + 
Sbjct: 438 K-LENEYALHRSIVD----HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE-RMT 491

Query: 766 EFIKSKI---LR-CSNKIRNDTKACWDDRSELCLL---KIYGIKTLVKSYLPVKDAHIRP 818
            F    +    R    KIR+D+ A     S L  L   K Y      K Y+   D     
Sbjct: 492 LF--RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY------KPYICDNDPKYER 543

Query: 819 GIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHK 868
            ++ +L  L            IE + +   +  L      LR++   + +
Sbjct: 544 LVNAILDFLPK----------IEENLICSKYTDL------LRIALMAEDE 577

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588	Back alignment and structure

>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1012
d2vglb_		579	a.118.1.10 (B:) Adaptin beta subunit N-terminal fr	8e-04
d1u6gc_		1207	a.118.1.2 (C:) Cullin-associated NEDD8-dissociated	0.001
d2vgla_		584	a.118.1.10 (A:) Adaptin alpha C subunit N-terminal	0.004

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1012
d2vglb_		579	Adaptin beta subunit N-terminal fragment {Human (H	99.51
d1b3ua_		588	Constant regulatory domain of protein phosphatase	99.47
d1b3ua_		588	Constant regulatory domain of protein phosphatase	99.46
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	99.45
d2vglb_		579	Adaptin beta subunit N-terminal fragment {Human (H	99.22
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	98.88
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	98.7
d2vgla_		584	Adaptin alpha C subunit N-terminal fragment {Mouse	98.62
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	98.55
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	98.5
d2vgla_		584	Adaptin alpha C subunit N-terminal fragment {Mouse	98.27
d1oyza_		276	Hypothetical protein YibA {Escherichia coli [TaxId	97.79
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	97.75
d1te4a_		111	MTH187 {Archaeon Methanobacterium thermoautotrophi	97.72
d1oyza_		276	Hypothetical protein YibA {Escherichia coli [TaxId	97.22
d1q1sc_		434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	97.19
d1te4a_		111	MTH187 {Archaeon Methanobacterium thermoautotrophi	97.04
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	96.94
d1xqra1		264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	96.91
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	96.7
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	96.52
d1wa5b_		503	Karyopherin alpha {Baker's yeast (Saccharomyces ce	96.41
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	96.37
d1q1sc_		434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	96.26
d1jdha_		529	beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	95.37
d1wa5b_		503	Karyopherin alpha {Baker's yeast (Saccharomyces ce	94.69
d1xqra1		264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	93.24
d1lrva_		233	Leucine-rich repeat variant {Azotobacter vinelandi	92.46
d1lrva_		233	Leucine-rich repeat variant {Azotobacter vinelandi	90.62
d1lsha1		336	Lipovitellin-phosvitin complex, superhelical domai	82.5

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}	Back information, alignment and structure

>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}	Back information, alignment and structure

>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}	Back information, alignment and structure