Citrus Sinensis ID: 001799

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010-
MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
ccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHcccccccccccccHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHccccccccccccccccccHHHcccccccccccHHHHHHHHHccccccEEEccccccHEEEEEEHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHEccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
maskfglaggiperrvrpiwdaiDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMgkcdeslsvsLQAKDLLYqndstlmddltLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHvashslhepEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGClleddsswcnaassdpihpqksvdckfshltdEVFNSRISEASTSVKKLhadtsvnlircpylaNLEIERRKLLYGKNNNDELMEAVLEYFLSFghlacftsDVEDFLLVLSLDKKTELLERLkssstshsteSIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYckslplskdldpqesihgeELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFlelsneigsksvtfnedwqsrpwwtptpdknyllgpfagisycpkenlMKEREANILGVVERKSLLPRLIYLSIQTASACVkenfevngsicdpkvSSELKYLLDRYAKMLGFSLRDAVEVVSGVssglnsseafGADMVGWLNFAVFLNAwnlsshevvlpdvngcrhSTWQVVNTLLKKCILEVrsmeslvcypqldLSVLVQLVTEPLAWHTLVMQScvrsslpsgkkkkrsgsadhstsplshdirgsvqstSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLeangrgegpgQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
maskfglaggiperrvrpiwDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEAStsvkklhadtsvnlircpyLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLErlkssstshstesikelGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNeigsksvtfnedwqsrpwWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFevngsicdpkVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVrsslpsgkkkkrsgsadhstsplshdirgsvqstSGVVEEVAKWLGhhikksedeKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNdstlmddltlstlQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNggekllllaegllkkHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKssstshstesIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAvevvsgvssglnsseAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
**********IPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAA**********VDCKFSHLTDEVFNSRI*****SVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTEL***************IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSL**************EELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIE*EESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCV************************************VVEEVAKWLGHHIK*********IF************GQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKI*************
*************RRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKS*********IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNY*LGPF******************ILGVVERKSLLPRLIYLSIQTAS******************SSELKYLLDRYAKMLGFSLRDAVEVVSG*********AFGADMVGWLNFAVFLNAWNLSSHEV***********TWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSC*************************HDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEAN***EGPGQVFRLLGTLI**********RISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQM***
MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLE*************IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSC************************************GVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSL**********
*******AGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSS*****************SPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLxxxxxxxxxxxxxxxxxxxxxxxxxxxxKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1011 2.2.26 [Sep-21-2011]
Q14CX7972 N-alpha-acetyltransferase yes no 0.584 0.608 0.256 5e-45
Q9VDQ7948 Phagocyte signaling-impai yes no 0.593 0.632 0.266 6e-45
Q6QI44970 N-alpha-acetyltransferase yes no 0.584 0.609 0.250 6e-45
Q8BWZ3972 N-alpha-acetyltransferase yes no 0.584 0.608 0.251 1e-44
Q294E0962 Phagocyte signaling-impai yes no 0.587 0.617 0.265 2e-43
Q17DK2940 Phagocyte signaling-impai N/A no 0.554 0.596 0.233 6e-31
Q7PYI4990 Phagocyte signaling-impai yes no 0.564 0.576 0.234 2e-28
Q21986958 N-terminal acetyltransfer yes no 0.556 0.587 0.228 2e-20
Q9Y809811 N-terminal acetyltransfer yes no 0.501 0.625 0.234 6e-10
>sp|Q14CX7|NAA25_HUMAN N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Homo sapiens GN=NAA25 PE=1 SV=1 Back     alignment and function desciption
 Score =  183 bits (465), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 164/639 (25%), Positives = 296/639 (46%), Gaps = 48/639 (7%)

Query: 13  ERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQA 72
           +RR+RPI+D +D+   K A++Q+  LL K+ +   A  LKA+ L+R GK +E+ +++ + 
Sbjct: 12  DRRLRPIYDYLDNGNNKMAIQQADKLLKKHKDLHCAKVLKAIGLQRTGKQEEAFTLAQEV 71

Query: 73  KDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVR 132
             L         DD +L  L I+++ + R +L T  YE A  K  N+ ++   LF  Y R
Sbjct: 72  AAL------EPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYAR 125

Query: 133 EYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGN----GGEKLLLLAEGLLKKHV 188
              + K QQ  + +YK   +  +  W+V S+ +Q +            L LAE +++K V
Sbjct: 126 VGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMV 185

Query: 189 ASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEV----DKLRMQGRLLARQ 244
               +     + +Y  ILE+  KY +AL+++ G LG  L  E+    +K     + L+R 
Sbjct: 186 KEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSEIQSRENKCMAMYKKLSRW 245

Query: 245 GDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCKFSHL 304
            +  A +   +++L  + DDW+ +L Y   +          A S P   + S++ +  + 
Sbjct: 246 PECNALS---RRLLLKNSDDWQFYLTYFDSVFR----LIEEAWSPPAEGEHSLEGEVHYS 298

Query: 305 TDEV---FNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELM--- 358
            ++       RI+E S S + L         R P+LA LE+ RR  L  +  NDE     
Sbjct: 299 AEKAVKFIEDRITEESKSSRHL---------RGPHLAKLELIRR--LRSQGCNDEYKLGD 347

Query: 359 --EAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKS-SSTSHSTE-------S 408
             E + +YF  FG   C  +D++ F+ +L   + T+ + +L      S  TE        
Sbjct: 348 PEELMFQYFKKFGDKPCCFTDLKVFVDLLPATQCTKFINQLLGVVPLSTPTEDKLALPAD 407

Query: 409 IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEEL 468
           I+ L   + + ++  L+G  + +  ++      ++   Y   L   K     E    +  
Sbjct: 408 IRALQQHLCVVQLTRLLGLYHTMDKNQKLSVVRELMLRYQHGLEFGKTCLKTELQFSDYY 467

Query: 469 LSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYE 528
             +A + L+ ++  T +     +A+ +LE GLT      Q+K+LLV +Y  LGA     +
Sbjct: 468 CLLAVHALIDVWRETGDETTVWQALTLLEEGLTHSPSNAQFKLLLVRIYCMLGAFEPVVD 527

Query: 529 WYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRH 588
            Y +LD K+I  +T+ + +         +  ++      LRF   + +++++    AY++
Sbjct: 528 LYSSLDAKHIQHDTIGYLLTRYAESLGQYAAASQSCNFALRFFHSNQKDTSEYIIQAYKY 587

Query: 589 RNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNAN 627
             + K+ EF+ F+ RL  S  +   R E  +L L   AN
Sbjct: 588 GAFEKIPEFIAFRNRLNNSLHFAQVRTERMLLDLLLEAN 626
Non-catalytic subunit of the NatB complex which catalyzes acetylation of the N-terminal methionine residues of peptides beginning with Met-Asp-Glu. May play a role in normal cell-cycle progression.
Homo sapiens (taxid: 9606)
>sp|Q9VDQ7|NAA25_DROME Phagocyte signaling-impaired protein OS=Drosophila melanogaster GN=psidin PE=2 SV=1 Back     alignment and function description
>sp|Q6QI44|NAA25_RAT N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Rattus norvegicus GN=Naa25 PE=2 SV=1 Back     alignment and function description
>sp|Q8BWZ3|NAA25_MOUSE N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus GN=Naa25 PE=1 SV=1 Back     alignment and function description
>sp|Q294E0|NAA25_DROPS Phagocyte signaling-impaired protein OS=Drosophila pseudoobscura pseudoobscura GN=psidin PE=3 SV=3 Back     alignment and function description
>sp|Q17DK2|NAA25_AEDAE Phagocyte signaling-impaired protein OS=Aedes aegypti GN=psidin PE=3 SV=2 Back     alignment and function description
>sp|Q7PYI4|NAA25_ANOGA Phagocyte signaling-impaired protein OS=Anopheles gambiae GN=psidin PE=3 SV=5 Back     alignment and function description
>sp|Q21986|NAA25_CAEEL N-terminal acetyltransferase B complex subunit NAA25 homolog OS=Caenorhabditis elegans GN=R13F6.10 PE=3 SV=3 Back     alignment and function description
>sp|Q9Y809|NAA25_SCHPO N-terminal acetyltransferase B complex subunit arm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arm1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1011
2241269071041 predicted protein [Populus trichocarpa] 1.0 0.971 0.721 0.0
2254344431009 PREDICTED: N-alpha-acetyltransferase 25, 0.997 0.999 0.711 0.0
2555505951014 TPR repeat-containing protein R13F6.10, 1.0 0.997 0.716 0.0
297745817 1561 unnamed protein product [Vitis vinifera] 0.973 0.630 0.711 0.0
3565659641017 PREDICTED: phagocyte signaling-impaired 0.999 0.993 0.682 0.0
3565396761016 PREDICTED: phagocyte signaling-impaired 0.999 0.994 0.681 0.0
2977933811018 hypothetical protein ARALYDRAFT_358061 [ 0.986 0.979 0.640 0.0
283929211046 unknown protein [Arabidopsis thaliana] 0.985 0.952 0.649 0.0
425686281065 tetratricopeptide repeat-containing prot 0.985 0.935 0.649 0.0
101770221028 unnamed protein product [Arabidopsis tha 0.985 0.968 0.633 0.0
>gi|224126907|ref|XP_002319956.1| predicted protein [Populus trichocarpa] gi|222858332|gb|EEE95879.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1508 bits (3905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/1041 (72%), Positives = 856/1041 (82%), Gaps = 30/1041 (2%)

Query: 1    MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMG 60
            MASKFGLAGGIPERRVRPIWDAIDSRQFKNALK ST+LLAK PNSPYALALK+L+LERMG
Sbjct: 1    MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKHSTSLLAKCPNSPYALALKSLILERMG 60

Query: 61   KCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNM 120
            K DE+LSV L AK+LLY+NDS LMDDLTLSTLQIVFQRLDRLDLAT CYEYAC K+ +N+
Sbjct: 61   KSDEALSVCLNAKELLYKNDSLLMDDLTLSTLQIVFQRLDRLDLATGCYEYACSKFPSNL 120

Query: 121  DHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLLA 180
            + MMGLFNCYVREYSFVKQQQTAIKMYK  GEERFLLWAVCSIQLQV CGNGGEKL +LA
Sbjct: 121  ELMMGLFNCYVREYSFVKQQQTAIKMYKLVGEERFLLWAVCSIQLQVFCGNGGEKLAMLA 180

Query: 181  EGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRL 240
            EGLLKKHVASHSLHEPEAL+VYISILEQQ KYGDALEILSG LGSLL+IEVDKLR+QGRL
Sbjct: 181  EGLLKKHVASHSLHEPEALMVYISILEQQEKYGDALEILSGQLGSLLMIEVDKLRIQGRL 240

Query: 241  LARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCK 300
            LAR GDY  +A IY+KILEL PDDWECFLHYLGCLLED SSW N A++DPI+P K VDCK
Sbjct: 241  LARSGDYATSANIYQKILELCPDDWECFLHYLGCLLEDGSSWSNGANNDPINPPKPVDCK 300

Query: 301  FSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEA 360
             S L D+VF+SRIS +   VKKL ADTS + IRCPYLA LEIERRK L+GK N+D+++EA
Sbjct: 301  VSQLADDVFHSRISTSLAFVKKLQADTSNDFIRCPYLATLEIERRKRLHGKGNDDDIVEA 360

Query: 361  VLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKK 420
            ++ YFL FGHLA F+SDVE FL VL+ DKKTE L +L  +  S ++   K LG  IT+ K
Sbjct: 361  LMLYFLKFGHLASFSSDVEAFLQVLTPDKKTEFLAKLIKTLDSSASAPTKVLGQSITIFK 420

Query: 421  IQELIGNTYKLLVD-----------------------------ELERSAVQMSEMYCKSL 451
            IQEL GN YKL V                              ELE  AVQM EMYCKSL
Sbjct: 421  IQELTGNMYKLPVLGACFFCFFCTHTLAHPTHNLLHIQTAQPLELEGCAVQMVEMYCKSL 480

Query: 452  PLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKV 511
            PLSKDLDPQES+HGEELLSM  NVLVQLFWRT + GYF+EAIMVLEFGLT+RR+ WQYK+
Sbjct: 481  PLSKDLDPQESMHGEELLSMVCNVLVQLFWRTRHLGYFIEAIMVLEFGLTIRRYIWQYKI 540

Query: 512  LLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFM 571
            LL+HLYSHLGA+ LAYEWYK+LDVKNILMETVSHHILPQMLVS LW + NNLL+DYLRFM
Sbjct: 541  LLLHLYSHLGAISLAYEWYKSLDVKNILMETVSHHILPQMLVSPLWGDLNNLLKDYLRFM 600

Query: 572  DDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEE 631
            DDH RESADLTFLAYRHRNYSKVIEFVQFKERLQRS+QYLVARVE+ ILQLKQ A+NIEE
Sbjct: 601  DDHFRESADLTFLAYRHRNYSKVIEFVQFKERLQRSNQYLVARVETPILQLKQKADNIEE 660

Query: 632  EESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKE 691
            EE VLENL  GV F+ELSNEIGSK++TFNED+QSRPWWTPT +KNYLLGPF G+SYCPKE
Sbjct: 661  EEGVLENLNGGVHFVELSNEIGSKNLTFNEDFQSRPWWTPTTEKNYLLGPFEGVSYCPKE 720

Query: 692  NLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDR 751
            NL KERE N+ GV+E+KSLLPR+IYLSI  ASA +KE+ E NGS+   K+SSE K+LL+R
Sbjct: 721  NLTKEREENVRGVIEKKSLLPRMIYLSIHNASASLKESVEENGSVSGSKISSEFKFLLER 780

Query: 752  YAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNG 811
            +AKMLGFSL DAVEVV GVSSG+ S EAFG+D + W+NFAVFLNAWNL+SHE + P+ + 
Sbjct: 781  HAKMLGFSLSDAVEVVMGVSSGVKSFEAFGSDEIDWINFAVFLNAWNLNSHEPLQPNGDQ 840

Query: 812  CRHSTWQVVNTLLKKCILE-VRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSS 870
            C    W VV+TLL K I E ++SMESL+C P++DL +LVQLVTEPLAWH LV+QSCVRSS
Sbjct: 841  CGRGIWYVVDTLLVKYISEKIKSMESLICSPRVDLPILVQLVTEPLAWHGLVIQSCVRSS 900

Query: 871  LPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSS 930
            LPSGKKKK+ G  D  +S + +DIR S+QS   +V+EVAKW+   I + EDE ++ I SS
Sbjct: 901  LPSGKKKKKGGPVDQHSSLVFNDIRDSIQSLCDIVKEVAKWIRGQIDRPEDESVEIILSS 960

Query: 931  LEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAF 990
            L    + EGPG+VF +L +LI S+NEAELGDRISQ +K+WSP+DVARK V G    LS F
Sbjct: 961  LRKKEQDEGPGRVFHVLESLIPSINEAELGDRISQELKTWSPLDVARKIVTGDSTLLSQF 1020

Query: 991  LRICESKIKSLQALKQQMAQV 1011
            L ICESKIKS QAL QQ+AQ+
Sbjct: 1021 LNICESKIKSFQALNQQIAQI 1041

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434443|ref|XP_002273069.1| PREDICTED: N-alpha-acetyltransferase 25, NatB auxiliary subunit [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550595|ref|XP_002516347.1| TPR repeat-containing protein R13F6.10, putative [Ricinus communis] gi|223544513|gb|EEF46031.1| TPR repeat-containing protein R13F6.10, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297745817|emb|CBI15873.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356565964|ref|XP_003551205.1| PREDICTED: phagocyte signaling-impaired protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356539676|ref|XP_003538321.1| PREDICTED: phagocyte signaling-impaired protein-like [Glycine max] Back     alignment and taxonomy information
>gi|297793381|ref|XP_002864575.1| hypothetical protein ARALYDRAFT_358061 [Arabidopsis lyrata subsp. lyrata] gi|297310410|gb|EFH40834.1| hypothetical protein ARALYDRAFT_358061 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|28392921|gb|AAO41896.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42568628|ref|NP_200653.2| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332009671|gb|AED97054.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|10177022|dbj|BAB10260.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1011
TAIR|locus:21712281065 AT5G58450 [Arabidopsis thalian 0.985 0.935 0.617 0.0
ZFIN|ZDB-GENE-041111-190975 naa25 "N(alpha)-acetyltransfer 0.630 0.653 0.249 6.2e-42
MGI|MGI:2442563972 Naa25 "N(alpha)-acetyltransfer 0.599 0.623 0.25 4.8e-41
RGD|1305685970 Naa25 "N(alpha)-acetyltransfer 0.630 0.656 0.241 1.7e-40
UNIPROTKB|Q14CX7972 NAA25 "N-alpha-acetyltransfera 0.623 0.648 0.244 2.8e-40
FB|FBgn0243511948 psidin "phagocyte signaling im 0.599 0.639 0.25 1.9e-37
UNIPROTKB|Q294E0962 psidin "Phagocyte signaling-im 0.593 0.623 0.251 2.4e-37
DICTYBASE|DDB_G0293234937 DDB_G0293234 "N-acetyltransfer 0.654 0.706 0.223 2.2e-31
UNIPROTKB|Q17DK2940 psidin "Phagocyte signaling-im 0.570 0.613 0.220 3.2e-24
UNIPROTKB|Q7PYI4990 psidin "Phagocyte signaling-im 0.575 0.587 0.224 3.5e-24
TAIR|locus:2171228 AT5G58450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3181 (1124.8 bits), Expect = 0., P = 0.
 Identities = 628/1017 (61%), Positives = 767/1017 (75%)

Query:     1 MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMG 60
             M+SKFGLAGGIPERRVRPIWDAIDSRQFKNALK  T+LLAKYP SPYALALKAL+ ERMG
Sbjct:    64 MSSKFGLAGGIPERRVRPIWDAIDSRQFKNALKLVTSLLAKYPKSPYALALKALIHERMG 123

Query:    61 KCDESLSVSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNM 120
             K DE+LSV L AK+LLY++             QIV QRLD LDLATSCY +ACGKY NN+
Sbjct:   124 KTDEALSVCLDAKELLYKDDLALMDDLTLSTLQIVLQRLDHLDLATSCYAHACGKYPNNL 183

Query:   121 DHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNXXXXXXXXX 180
             + MMGLFNCYVREYSFVKQQQTAIKMYK AGEERFLLWAVCSIQLQVLC           
Sbjct:   184 ELMMGLFNCYVREYSFVKQQQTAIKMYKLAGEERFLLWAVCSIQLQVLCDKSGEKLLLLA 243

Query:   181 XXXXXXHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRL 240
                   H+ASHS+HEPEAL+VYIS+LEQQSKY DALE+LSG LGSLL+IEVDKLR+QGRL
Sbjct:   244 EGLLKKHIASHSMHEPEALMVYISLLEQQSKYNDALEVLSGDLGSLLMIEVDKLRIQGRL 303

Query:   241 LARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNAASSDPIHPQKSVDCK 300
             LAR  DY+AA  +YKKILELSPDDWECFLHYLGCLLEDDS W    + D IHP K ++CK
Sbjct:   304 LARANDYSAAVDVYKKILELSPDDWECFLHYLGCLLEDDSIWKYFDNIDQIHPTKHIECK 363

Query:   301 FSHLTDEVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEA 360
             FSHLT+E+F+SRIS AS  V+KL  D   + +R PYLA LEIE+RK L+GK N D+L+E+
Sbjct:   364 FSHLTEEMFDSRISSASDLVQKLQRDAENSNLRGPYLAELEIEKRKFLFGKKNEDKLLES 423

Query:   361 VLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKXXXXXXXXXXIKELGWFITLKK 420
             +L+YFL FGHLAC+ SDVE +L VLS +KK   +E L            K LG   T+ K
Sbjct:   424 LLQYFLKFGHLACYASDVEAYLQVLSPNKKAGFVEMLVKNSDSSASAT-KVLGQTTTILK 482

Query:   421 IQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLF 480
             +QEL GN + L  DE+E SAV+++++YC++L LSKDLDPQES+ GEELLS+ SN+LVQLF
Sbjct:   483 VQELTGNIFGLPTDEIEASAVKLAKLYCQNLSLSKDLDPQESMFGEELLSLISNMLVQLF 542

Query:   481 WRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILM 540
             WRT ++GY  EAIMVLE GLT+R H WQYK+LL+H+YS++GALPLA+E YKALDVKNIL 
Sbjct:   543 WRTRDFGYLAEAIMVLELGLTIRGHVWQYKILLLHIYSYVGALPLAFERYKALDVKNILT 602

Query:   541 ETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQF 600
             ETVSHHIL QML S +WV+ +NLL+DYL+FMDDHLRESADLTFLAYRHRNYSKVIEFV F
Sbjct:   603 ETVSHHILRQMLESPMWVDLSNLLKDYLKFMDDHLRESADLTFLAYRHRNYSKVIEFVLF 662

Query:   601 KERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFN 660
             K+RLQ S+QY  ARVE+S+LQLKQNA++ EEEE +LENLK GV  +ELSNEIGS+++ FN
Sbjct:   663 KQRLQHSNQYQAARVEASVLQLKQNADSFEEEERILENLKSGVQLVELSNEIGSRTLKFN 722

Query:   661 EDWQSRPWWTPTPDKNYLLGPFAGISYCP-KENLMKEREANILGVVERKSLLPRLIYLSI 719
             ED Q+RPWWTP P+KNYLLGPF  ISYCP KEN+ +ERE N+   ++RKSLLPR+IYLSI
Sbjct:   723 EDMQTRPWWTPCPEKNYLLGPFEEISYCPPKENVKEEREENMKRAIQRKSLLPRMIYLSI 782

Query:   720 QTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAXXXXXXXXXXXXXXXA 779
             Q     +KE+ E NGS  D  V  ELK LL+ Y KMLG SL DA               +
Sbjct:   783 QCTPTALKESVETNGSGGDIDVCEELKCLLEDYTKMLGCSLSDAVEMITEISQGARTSES 842

Query:   780 FGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILE-VRSMESL- 837
              G+++V WLNFAVF NAW+LSS E          H  W V+N+L ++ IL+ VRSM S  
Sbjct:   843 LGSNLVDWLNFAVFWNAWSLSSQE----------H--WHVLNSLFERLILDRVRSMGSSD 890

Query:   838 --VCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADH-STSPLSHDI 894
                CY   D+ VLVQ++TEPLAWH+L++Q+C RSSLPSGKKKK++  +D  S+SP+S  I
Sbjct:   891 MSSCYS--DVQVLVQIITEPLAWHSLIIQACTRSSLPSGKKKKKNQHSDQLSSSPISQAI 948

Query:   895 RGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSL 954
             + S+Q     +++V+ WL + +   ED +++   ++L+ +G   GPGQ+  +L + I+S 
Sbjct:   949 KDSIQLLCSTIQDVSNWLLNQLNNPEDGQVEGFLTTLKRDGNAAGPGQILGVLESFIASS 1008

Query:   955 NEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV 1011
              E+E+G+RI QA+KSW+  D ARK V  Q+  L  FL+ICESK K L+ LKQQM+ V
Sbjct:  1009 EESEVGNRIFQALKSWNTADTARKTVMAQQRVLREFLQICESKRKLLETLKQQMSHV 1065
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
ZFIN|ZDB-GENE-041111-190 naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2442563 Naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305685 Naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q14CX7 NAA25 "N-alpha-acetyltransferase 25, NatB auxiliary subunit" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0243511 psidin "phagocyte signaling impaired" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q294E0 psidin "Phagocyte signaling-impaired protein" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0293234 DDB_G0293234 "N-acetyltransferase, non-catalytic subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q17DK2 psidin "Phagocyte signaling-impaired protein" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
UNIPROTKB|Q7PYI4 psidin "Phagocyte signaling-impaired protein" [Anopheles gambiae (taxid:7165)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1011
pfam09797364 pfam09797, NatB_MDM20, N-acetyltransferase B compl 7e-69
pfam1341469 pfam13414, TPR_11, TPR repeat 0.002
pfam12569516 pfam12569, NARP1, NMDA receptor-regulated protein 0.002
TIGR02917899 TIGR02917, PEP_TPR_lipo, putative PEP-CTERM system 0.003
>gnl|CDD|220409 pfam09797, NatB_MDM20, N-acetyltransferase B complex (NatB) non catalytic subunit Back     alignment and domain information 
 Score =  234 bits (598), Expect = 7e-69
 Identities = 106/353 (30%), Positives = 177/353 (50%), Gaps = 6/353 (1%)

Query: 311 SRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGH 370
               E+  ++ +   D S    R PYLA LE+ +R +  G  N  +L++ VL+YF  FG 
Sbjct: 18  KEEVESVLNILESLEDASKPKSRNPYLARLELLKRLVDSGFANGGDLLDLVLQYFDRFGD 77

Query: 371 LACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYK 430
             C   D++ +L  L  +K+  L+E+L S   S  ++   +L   I   K++ L G  + 
Sbjct: 78  KLCCFGDLKKYLEDLDKEKRKALIEKLLSKIGSEKSD-ENDLIRHINALKLERLCGLWHS 136

Query: 431 LLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFM 490
           L  + +     ++  +Y + L L K L   E    ++L  +A N L+ L+  T +  Y +
Sbjct: 137 LPEESVIALVSELYLLYEEGLSLEKKL-ATERQPSDDLALLAVNSLLDLYLSTKDLEYLL 195

Query: 491 EAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQ 550
           EAI +LE GL    H +  K+LL+ LY  LGA  LA E Y+ LD+KNI  +T+ H +  +
Sbjct: 196 EAIALLENGLKKSPHNYDLKLLLIRLYLLLGAASLALEHYEKLDIKNIQHDTLGHLLFTR 255

Query: 551 MLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQY 610
           +        +++     LRF  + LRE+++L   A+ + +YSK+ EF++F+ RL  S   
Sbjct: 256 LSTGGPNKSASSAFEQALRFYLNSLRETSELISKAFENGSYSKIEEFIEFRRRLTNSLSR 315

Query: 611 LVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDW 663
            +  VE+  L    N   +E  ++ LE L        L N I  + ++ N D+
Sbjct: 316 AMLAVENLRLSRLLNGKRVELLKAYLEYLSQI----WLENRIDLEELSDNRDF 364

This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB). The NatB complex catalyzes the acetylation of the amino-terminal methionine residue of all proteins beginning with Met-Asp or Met-Glu and of some proteins beginning with Met-Asn or Met-Met. In Saccharomyces cerevisiae this subunit is called MDM20 and in Schizosaccharomyces pombe it is called Arm1. NatB acetylates the Tpm1 protein and regulates and tropomyocin-actin interactions. This subunit is required by the NatB complex for the N-terminal acetylation of Tpm1. Length = 364
>gnl|CDD|222112 pfam13414, TPR_11, TPR repeat Back     alignment and domain information
>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1 Back     alignment and domain information
>gnl|CDD|234059 TIGR02917, PEP_TPR_lipo, putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1011
KOG2053932 consensus Mitochondrial inheritance and actin cyto 100.0
PF09797365 NatB_MDM20: N-acetyltransferase B complex (NatB) n 100.0
KOG1156700 consensus N-terminal acetyltransferase [Chromatin 99.97
TIGR02917899 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat 99.85
TIGR02917899 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat 99.84
PF12569517 NARP1: NMDA receptor-regulated protein 1 ; InterPr 99.8
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 99.77
PRK114471157 cellulose synthase subunit BcsC; Provisional 99.77
PRK15174656 Vi polysaccharide export protein VexE; Provisional 99.73
KOG4626966 consensus O-linked N-acetylglucosamine transferase 99.72
PRK15174656 Vi polysaccharide export protein VexE; Provisional 99.71
PRK114471157 cellulose synthase subunit BcsC; Provisional 99.7
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 99.69
KOG4626966 consensus O-linked N-acetylglucosamine transferase 99.67
PRK11788389 tetratricopeptide repeat protein; Provisional 99.65
KOG20021018 consensus TPR-containing nuclear phosphoprotein th 99.59
PRK10049765 pgaA outer membrane protein PgaA; Provisional 99.59
KOG1126638 consensus DNA-binding cell division cycle control 99.57
PRK10049765 pgaA outer membrane protein PgaA; Provisional 99.54
PRK12370553 invasion protein regulator; Provisional 99.54
PRK11788389 tetratricopeptide repeat protein; Provisional 99.52
PRK11189296 lipoprotein NlpI; Provisional 99.51
KOG2076895 consensus RNA polymerase III transcription factor 99.51
PF13429280 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 99.51
KOG20021018 consensus TPR-containing nuclear phosphoprotein th 99.5
PRK14574822 hmsH outer membrane protein; Provisional 99.49
PRK09782987 bacteriophage N4 receptor, outer membrane subunit; 99.49
TIGR02521234 type_IV_pilW type IV pilus biogenesis/stability pr 99.47
KOG1126638 consensus DNA-binding cell division cycle control 99.46
PRK11189296 lipoprotein NlpI; Provisional 99.45
TIGR00540409 hemY_coli hemY protein. This is an uncharacterized 99.45
PRK09782987 bacteriophage N4 receptor, outer membrane subunit; 99.45
PRK10747398 putative protoheme IX biogenesis protein; Provisio 99.43
PRK12370553 invasion protein regulator; Provisional 99.43
KOG1173611 consensus Anaphase-promoting complex (APC), Cdc16 99.35
TIGR02521234 type_IV_pilW type IV pilus biogenesis/stability pr 99.31
COG3063250 PilF Tfp pilus assembly protein PilF [Cell motilit 99.31
KOG1174564 consensus Anaphase-promoting complex (APC), subuni 99.31
PRK10747398 putative protoheme IX biogenesis protein; Provisio 99.3
KOG1173611 consensus Anaphase-promoting complex (APC), Cdc16 99.29
TIGR00540409 hemY_coli hemY protein. This is an uncharacterized 99.29
PRK14574822 hmsH outer membrane protein; Provisional 99.28
PLN02789320 farnesyltranstransferase 99.28
KOG2376652 consensus Signal recognition particle, subunit Srp 99.25
PF13429280 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 99.25
TIGR03302235 OM_YfiO outer membrane assembly lipoprotein YfiO. 99.18
PLN03077857 Protein ECB2; Provisional 99.18
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 99.15
KOG1155559 consensus Anaphase-promoting complex (APC), Cdc23 99.15
KOG1125579 consensus TPR repeat-containing protein [General f 99.15
TIGR03302235 OM_YfiO outer membrane assembly lipoprotein YfiO. 99.14
PLN03081697 pentatricopeptide (PPR) repeat-containing protein; 99.14
PLN032181060 maturation of RBCL 1; Provisional 99.14
COG2956389 Predicted N-acetylglucosaminyl transferase [Carboh 99.14
PRK15359144 type III secretion system chaperone protein SscB; 99.14
KOG1155559 consensus Anaphase-promoting complex (APC), Cdc23 99.13
KOG0547606 consensus Translocase of outer mitochondrial membr 99.11
KOG0547606 consensus Translocase of outer mitochondrial membr 99.1
PF12569517 NARP1: NMDA receptor-regulated protein 1 ; InterPr 99.09
KOG2003840 consensus TPR repeat-containing protein [General f 99.06
PLN032181060 maturation of RBCL 1; Provisional 99.05
PLN03077857 Protein ECB2; Provisional 99.04
PRK14720906 transcript cleavage factor/unknown domain fusion p 99.04
PRK15359144 type III secretion system chaperone protein SscB; 99.04
PRK10370198 formate-dependent nitrite reductase complex subuni 99.02
cd05804355 StaR_like StaR_like; a well-conserved protein foun 99.02
KOG1129478 consensus TPR repeat-containing protein [General f 99.0
cd05804355 StaR_like StaR_like; a well-conserved protein foun 98.98
KOG1125579 consensus TPR repeat-containing protein [General f 98.97
KOG0553304 consensus TPR repeat-containing protein [General f 98.97
KOG0548539 consensus Molecular co-chaperone STI1 [Posttransla 98.95
PLN02789320 farnesyltranstransferase 98.93
KOG2076895 consensus RNA polymerase III transcription factor 98.92
KOG0495913 consensus HAT repeat protein [RNA processing and m 98.91
TIGR02552135 LcrH_SycD type III secretion low calcium response 98.9
KOG0495913 consensus HAT repeat protein [RNA processing and m 98.87
KOG2003840 consensus TPR repeat-containing protein [General f 98.86
PLN03081697 pentatricopeptide (PPR) repeat-containing protein; 98.85
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 98.85
PLN03088356 SGT1, suppressor of G2 allele of SKP1; Provisional 98.82
KOG1156700 consensus N-terminal acetyltransferase [Chromatin 98.8
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 98.79
COG5010257 TadD Flp pilus assembly protein TadD, contains TPR 98.77
COG3071400 HemY Uncharacterized enzyme of heme biosynthesis [ 98.76
COG3063250 PilF Tfp pilus assembly protein PilF [Cell motilit 98.75
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 98.73
TIGR02552135 LcrH_SycD type III secretion low calcium response 98.71
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 98.71
KOG4162799 consensus Predicted calmodulin-binding protein [Si 98.68
KOG1129478 consensus TPR repeat-containing protein [General f 98.68
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 98.67
PRK10370198 formate-dependent nitrite reductase complex subuni 98.63
COG4783484 Putative Zn-dependent protease, contains TPR repea 98.63
COG4783484 Putative Zn-dependent protease, contains TPR repea 98.62
KOG3060289 consensus Uncharacterized conserved protein [Funct 98.6
TIGR02795119 tol_pal_ybgF tol-pal system protein YbgF. Members 98.57
COG2956389 Predicted N-acetylglucosaminyl transferase [Carboh 98.57
KOG2376652 consensus Signal recognition particle, subunit Srp 98.57
KOG1174564 consensus Anaphase-promoting complex (APC), subuni 98.54
KOG4162799 consensus Predicted calmodulin-binding protein [Si 98.53
PRK10866243 outer membrane biogenesis protein BamD; Provisiona 98.51
PF1289584 Apc3: Anaphase-promoting complex, cyclosome, subun 98.5
KOG0548539 consensus Molecular co-chaperone STI1 [Posttransla 98.49
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 98.49
PRK10803263 tol-pal system protein YbgF; Provisional 98.48
COG5010257 TadD Flp pilus assembly protein TadD, contains TPR 98.48
KOG3060289 consensus Uncharacterized conserved protein [Funct 98.47
COG1729262 Uncharacterized protein conserved in bacteria [Fun 98.42
PLN03088356 SGT1, suppressor of G2 allele of SKP1; Provisional 98.41
PRK15363157 pathogenicity island 2 chaperone protein SscA; Pro 98.41
TIGR02795119 tol_pal_ybgF tol-pal system protein YbgF. Members 98.41
cd00189100 TPR Tetratricopeptide repeat domain; typically con 98.38
PRK10866243 outer membrane biogenesis protein BamD; Provisiona 98.37
cd00189100 TPR Tetratricopeptide repeat domain; typically con 98.37
PF09976145 TPR_21: Tetratricopeptide repeat; InterPro: IPR018 98.33
PF13525203 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M 98.31
PRK15363157 pathogenicity island 2 chaperone protein SscA; Pro 98.31
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 98.29
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 98.28
CHL00033168 ycf3 photosystem I assembly protein Ycf3 98.25
PF04733290 Coatomer_E: Coatomer epsilon subunit; InterPro: IP 98.24
PRK10153517 DNA-binding transcriptional activator CadC; Provis 98.24
PF13525203 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M 98.23
PRK02603172 photosystem I assembly protein Ycf3; Provisional 98.17
PF09295395 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter 98.15
KOG0543397 consensus FKBP-type peptidyl-prolyl cis-trans isom 98.15
COG4235287 Cytochrome c biogenesis factor [Posttranslational 98.14
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 98.13
KOG0553304 consensus TPR repeat-containing protein [General f 98.1
COG4235287 Cytochrome c biogenesis factor [Posttranslational 98.08
KOG1128777 consensus Uncharacterized conserved protein, conta 98.07
PRK02603172 photosystem I assembly protein Ycf3; Provisional 98.06
PF09976145 TPR_21: Tetratricopeptide repeat; InterPro: IPR018 98.05
PF1455968 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN 98.04
PRK14720906 transcript cleavage factor/unknown domain fusion p 98.04
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 98.01
KOG11271238 consensus TPR repeat-containing protein [RNA proce 97.99
KOG2053932 consensus Mitochondrial inheritance and actin cyto 97.97
PRK10803263 tol-pal system protein YbgF; Provisional 97.96
CHL00033168 ycf3 photosystem I assembly protein Ycf3 97.94
KOG1915677 consensus Cell cycle control protein (crooked neck 97.92
COG4105254 ComL DNA uptake lipoprotein [General function pred 97.89
KOG10701710 consensus rRNA processing protein Rrp5 [RNA proces 97.88
PF1455968 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN 97.88
KOG3081299 consensus Vesicle coat complex COPI, epsilon subun 97.87
COG3071400 HemY Uncharacterized enzyme of heme biosynthesis [ 97.87
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 97.82
KOG1915677 consensus Cell cycle control protein (crooked neck 97.82
PRK04841903 transcriptional regulator MalT; Provisional 97.81
KOG3785557 consensus Uncharacterized conserved protein [Funct 97.8
COG0457291 NrfG FOG: TPR repeat [General function prediction 97.77
PF1337173 TPR_9: Tetratricopeptide repeat 97.76
PRK11906458 transcriptional regulator; Provisional 97.76
KOG3785557 consensus Uncharacterized conserved protein [Funct 97.75
PRK15331165 chaperone protein SicA; Provisional 97.74
PF04733290 Coatomer_E: Coatomer epsilon subunit; InterPro: IP 97.74
PF13512142 TPR_18: Tetratricopeptide repeat 97.74
KOG1128777 consensus Uncharacterized conserved protein, conta 97.73
PF12688120 TPR_5: Tetratrico peptide repeat 97.73
PF1289584 Apc3: Anaphase-promoting complex, cyclosome, subun 97.68
COG4700251 Uncharacterized protein conserved in bacteria cont 97.67
KOG4340459 consensus Uncharacterized conserved protein [Funct 97.67
PF1337173 TPR_9: Tetratricopeptide repeat 97.65
PRK04841903 transcriptional regulator MalT; Provisional 97.65
KOG11271238 consensus TPR repeat-containing protein [RNA proce 97.57
KOG0543397 consensus FKBP-type peptidyl-prolyl cis-trans isom 97.53
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 97.52
PLN03098453 LPA1 LOW PSII ACCUMULATION1; Provisional 97.52
PRK15331165 chaperone protein SicA; Provisional 97.52
PF13512142 TPR_18: Tetratricopeptide repeat 97.52
KOG4648536 consensus Uncharacterized conserved protein, conta 97.49
KOG10701710 consensus rRNA processing protein Rrp5 [RNA proces 97.48
PF04184539 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for 97.46
KOG4234271 consensus TPR repeat-containing protein [General f 97.46
COG1729262 Uncharacterized protein conserved in bacteria [Fun 97.45
COG0457291 NrfG FOG: TPR repeat [General function prediction 97.45
PRK10153517 DNA-binding transcriptional activator CadC; Provis 97.4
PF06552186 TOM20_plant: Plant specific mitochondrial import r 97.37
PF14938282 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 97.37
COG4785297 NlpI Lipoprotein NlpI, contains TPR repeats [Gener 97.35
KOG4340459 consensus Uncharacterized conserved protein [Funct 97.32
PF1342844 TPR_14: Tetratricopeptide repeat 97.27
KOG2047835 consensus mRNA splicing factor [RNA processing and 97.23
COG4785297 NlpI Lipoprotein NlpI, contains TPR repeats [Gener 97.2
PF09295395 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); Inter 97.15
PLN03098453 LPA1 LOW PSII ACCUMULATION1; Provisional 97.11
COG4700251 Uncharacterized protein conserved in bacteria cont 97.09
KOG0376476 consensus Serine-threonine phosphatase 2A, catalyt 97.01
PRK11906458 transcriptional regulator; Provisional 97.01
PF14938282 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 96.96
COG3118304 Thioredoxin domain-containing protein [Posttransla 96.92
COG3898531 Uncharacterized membrane-bound protein [Function u 96.84
KOG3081299 consensus Vesicle coat complex COPI, epsilon subun 96.73
PF12688120 TPR_5: Tetratrico peptide repeat 96.67
PF1342844 TPR_14: Tetratricopeptide repeat 96.65
COG4105254 ComL DNA uptake lipoprotein [General function pred 96.56
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 96.41
PF0051534 TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 96.37
PF08631278 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: 96.3
PF05843280 Suf: Suppressor of forked protein (Suf); InterPro: 96.28
COG2976207 Uncharacterized protein conserved in bacteria [Fun 96.24
KOG4642284 consensus Chaperone-dependent E3 ubiquitin protein 96.24
PF13281374 DUF4071: Domain of unknown function (DUF4071) 96.23
PF06552186 TOM20_plant: Plant specific mitochondrial import r 96.18
PF03704146 BTAD: Bacterial transcriptional activator domain; 96.13
KOG2610491 consensus Uncharacterized conserved protein [Funct 96.07
KOG4555175 consensus TPR repeat-containing protein [Function 96.06
COG2909894 MalT ATP-dependent transcriptional regulator [Tran 96.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 95.99
PF1343134 TPR_17: Tetratricopeptide repeat 95.98
KOG1130639 consensus Predicted G-alpha GTPase interaction pro 95.97
PF08424321 NRDE-2: NRDE-2, necessary for RNA interference; In 95.85
PF13281374 DUF4071: Domain of unknown function (DUF4071) 95.82
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 95.8
COG2976207 Uncharacterized protein conserved in bacteria [Fun 95.6
PF0051534 TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 95.54
KOG0545329 consensus Aryl-hydrocarbon receptor-interacting pr 95.49
PF1343134 TPR_17: Tetratricopeptide repeat 95.48
COG3118304 Thioredoxin domain-containing protein [Posttransla 95.42
PF05843280 Suf: Suppressor of forked protein (Suf); InterPro: 95.41
KOG1941518 consensus Acetylcholine receptor-associated protei 95.4
PF10300468 DUF3808: Protein of unknown function (DUF3808); In 95.28
KOG4648536 consensus Uncharacterized conserved protein, conta 95.26
KOG2300629 consensus Uncharacterized conserved protein [Funct 95.15
KOG1308377 consensus Hsp70-interacting protein Hip/Transient 95.05
KOG2471696 consensus TPR repeat-containing protein [General f 95.02
PF1318134 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ 94.95
PF10300468 DUF3808: Protein of unknown function (DUF3808); In 94.94
KOG2610491 consensus Uncharacterized conserved protein [Funct 94.94
KOG1586288 consensus Protein required for fusion of vesicles 94.88
KOG1585308 consensus Protein required for fusion of vesicles 94.87
KOG4555175 consensus TPR repeat-containing protein [Function 94.67
KOG2796366 consensus Uncharacterized conserved protein [Funct 94.63
PF1317433 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_ 94.55
KOG4234271 consensus TPR repeat-containing protein [General f 94.52
KOG2047835 consensus mRNA splicing factor [RNA processing and 94.46
KOG1130639 consensus Predicted G-alpha GTPase interaction pro 94.29
PF1318134 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ 94.01
KOG2796366 consensus Uncharacterized conserved protein [Funct 94.01
PF1317636 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ 93.77
KOG36171416 consensus WD40 and TPR repeat-containing protein [ 93.53
PF02259352 FAT: FAT domain; InterPro: IPR003151 The FAT domai 93.43
KOG0530318 consensus Protein farnesyltransferase, alpha subun 93.26
KOG2471696 consensus TPR repeat-containing protein [General f 93.16
KOG36171416 consensus WD40 and TPR repeat-containing protein [ 93.05
PF03704146 BTAD: Bacterial transcriptional activator domain; 92.95
COG3898531 Uncharacterized membrane-bound protein [Function u 92.59
PF1456190 TPR_20: Tetratricopeptide repeat; PDB: 3QOU_A 2R5S 92.54
KOG1586288 consensus Protein required for fusion of vesicles 91.93
PF1317433 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_ 91.75
smart0002834 TPR Tetratricopeptide repeats. Repeats present in 91.71
KOG1464440 consensus COP9 signalosome, subunit CSN2 [Posttran 91.62
KOG4507886 consensus Uncharacterized conserved protein, conta 91.6
PRK10941269 hypothetical protein; Provisional 91.38
PF12968144 DUF3856: Domain of Unknown Function (DUF3856); Int 91.14
KOG1914656 consensus mRNA cleavage and polyadenylation factor 91.11
KOG3824472 consensus Huntingtin interacting protein HYPE [Gen 90.71
KOG1941518 consensus Acetylcholine receptor-associated protei 90.44
PRK15180831 Vi polysaccharide biosynthesis protein TviD; Provi 90.43
PF1485353 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repe 90.31
PF1485353 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repe 89.89
COG2909894 MalT ATP-dependent transcriptional regulator [Tran 89.59
PF04184539 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for 89.48
PF08424321 NRDE-2: NRDE-2, necessary for RNA interference; In 88.68
PF04781111 DUF627: Protein of unknown function (DUF627); Inte 88.66
PF1317636 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ 88.42
PF02259352 FAT: FAT domain; InterPro: IPR003151 The FAT domai 88.14
KOG0551390 consensus Hsp90 co-chaperone CNS1 (contains TPR re 88.03
PRK10941269 hypothetical protein; Provisional 87.77
KOG36161636 consensus Selective LIM binding factor [Transcript 87.69
KOG09851666 consensus Vesicle coat protein clathrin, heavy cha 87.5
PF04910360 Tcf25: Transcriptional repressor TCF25; InterPro: 87.43
KOG1585308 consensus Protein required for fusion of vesicles 87.3
PF09613160 HrpB1_HrpK: Bacterial type III secretion protein ( 87.18
KOG0545329 consensus Aryl-hydrocarbon receptor-interacting pr 86.86
KOG0376476 consensus Serine-threonine phosphatase 2A, catalyt 86.45
KOG1310758 consensus WD40 repeat protein [General function pr 86.42
PF1337442 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT 85.24
KOG4642284 consensus Chaperone-dependent E3 ubiquitin protein 85.19
smart0002834 TPR Tetratricopeptide repeats. Repeats present in 84.3
PF14863141 Alkyl_sulf_dimr: Alkyl sulfatase dimerisation; PDB 84.28
KOG09851666 consensus Vesicle coat protein clathrin, heavy cha 83.75
KOG2396568 consensus HAT (Half-A-TPR) repeat-containing prote 83.51
KOG0529421 consensus Protein geranylgeranyltransferase type I 82.86
KOG2396568 consensus HAT (Half-A-TPR) repeat-containing prote 82.85
PF1456190 TPR_20: Tetratricopeptide repeat; PDB: 3QOU_A 2R5S 81.84
PF04053443 Coatomer_WDAD: Coatomer WD associated region ; Int 81.56
KOG3824472 consensus Huntingtin interacting protein HYPE [Gen 81.1
COG4976287 Predicted methyltransferase (contains TPR repeat) 80.74
COG4976287 Predicted methyltransferase (contains TPR repeat) 80.23
KOG36161636 consensus Selective LIM binding factor [Transcript 80.1
COG1747711 Uncharacterized N-terminal domain of the transcrip 80.05
>KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-134  Score=1178.81  Aligned_cols=923  Identities=30%  Similarity=0.380  Sum_probs=830.8

Q ss_pred             ccCCCCCchHhhHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCChHHHHHHHHHHHHhhhhCCCCC
Q 001799            4 KFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTL   83 (1011)
Q Consensus         4 ~~~~~~~v~eRrl~~I~dald~gn~KqAL~l~dklLKk~P~~~~a~aLKA~aL~rlgk~dEAl~l~~~alelL~~d~~~P   83 (1011)
                      ++|++++++|||+|||||+++.+|||+|++.++++++++||.++|+++||+++.|+|+.+||..+++ +++.     ..+
T Consensus         1 ~~g~~~a~~err~rpi~d~ld~~qfkkal~~~~kllkk~Pn~~~a~vLkaLsl~r~gk~~ea~~~Le-~~~~-----~~~   74 (932)
T KOG2053|consen    1 MSGAELAMSERRLRPIYDLLDSSQFKKALAKLGKLLKKHPNALYAKVLKALSLFRLGKGDEALKLLE-ALYG-----LKG   74 (932)
T ss_pred             CcchhhccHHHHHhHHHHHhhhHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHhcCchhHHHHHh-hhcc-----CCC
Confidence            4788999999999999999999999999999999999999999999999999999999999996654 4343     357


Q ss_pred             CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 001799           84 MDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSI  163 (1011)
Q Consensus        84 ~D~~al~~Lg~~~~~lg~~~eA~~~YekAlk~~P~n~el~~~Lf~ayvr~~d~~~Aqq~a~kL~K~~P~~ry~~Wai~sl  163 (1011)
                      +|+.++..+..||++++++++|..+|+++++++|+ ++..++||++|+|.++|+++|+++++|+|.+|+++||||+++++
T Consensus        75 ~D~~tLq~l~~~y~d~~~~d~~~~~Ye~~~~~~P~-eell~~lFmayvR~~~yk~qQkaa~~LyK~~pk~~yyfWsV~Sl  153 (932)
T KOG2053|consen   75 TDDLTLQFLQNVYRDLGKLDEAVHLYERANQKYPS-EELLYHLFMAYVREKSYKKQQKAALQLYKNFPKRAYYFWSVISL  153 (932)
T ss_pred             CchHHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchHHHHHHH
Confidence            89999999999999999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCc---HHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHcCChHHHHHHHHhhhcccCCChHH-HHHHHH
Q 001799          164 QLQVLCGNG---GEKLLLLAEGLLKKHVASH-SLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVD-KLRMQG  238 (1011)
Q Consensus       164 ~Lq~~~~~~---a~klL~LAek~Lekai~~~-p~~~~eel~l~~~IL~~qgk~eEAL~~L~~~l~~~~~~~~~-~l~l~a  238 (1011)
                      ++|+..+++   ....+++|++|+++.+... ++++.+|+.+|..|+..+|+|+||++++...++...++... ......
T Consensus       154 ilqs~~~~~~~~~~i~l~LA~~m~~~~l~~~gk~~s~aE~~Lyl~iL~~~~k~~eal~~l~~~la~~l~~~~~~l~~~~~  233 (932)
T KOG2053|consen  154 ILQSIFSENELLDPILLALAEKMVQKLLEKKGKIESEAEIILYLLILELQGKYQEALEFLAITLAEKLTSANLYLENKKL  233 (932)
T ss_pred             HHHhccCCcccccchhHHHHHHHHHHHhccCCccchHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhccccchHHHHHHH
Confidence            999876543   2367889999999999988 89999999999999999999999999998887665665443 334456


Q ss_pred             HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc-cCccccccCCCCCCCCCCcccccccCcchHhhhhcHHHHH
Q 001799          239 RLLARQGDYTAAAQIYKKILELSPDDWECFLHYLGCLLE-DDSSWCNAASSDPIHPQKSVDCKFSHLTDEVFNSRISEAS  317 (1011)
Q Consensus       239 ~ll~klg~~eeA~~~~~kaL~~nPDdw~~~~~yl~all~-~~~~w~~~~~~~~~~p~~~~~~~~~~l~~e~~~~~i~ea~  317 (1011)
                      .++.++++|.+.++++.++++.++|||..   |.++.++ ....|+.++++..         .        +...++.+.
T Consensus       234 dllk~l~~w~~l~~l~~~Ll~k~~Ddy~~---~~~sv~klLe~~~~~~a~~~~---------s--------~~~~l~~~~  293 (932)
T KOG2053|consen  234 DLLKLLNRWQELFELSSRLLEKGNDDYKI---YTDSVFKLLELLNKEPAEAAH---------S--------LSKSLDECI  293 (932)
T ss_pred             HHHHHhcChHHHHHHHHHHHHhCCcchHH---HHHHHHHHHHhcccccchhhh---------h--------hhhhHHHHH
Confidence            89999999999999999999999999555   4444433 1223444332211         1        112355666


Q ss_pred             HHHHHHHhccCCCCchhhHhhchhHHHHHhhhCCCCchHHHHHHHHHHHHcCCccccHHhHHHHHhcCCHHHHHHHHHHH
Q 001799          318 TSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERL  397 (1011)
Q Consensus       318 ~fi~~l~~~~~~~~~Rgp~LA~LEL~~r~~~~G~~d~~~l~~~l~~Y~~kfg~K~cCf~DLk~Yl~~L~~e~~~~~l~~l  397 (1011)
                      +++++.+..    ++||||||+||+.+|....|+     ..+.+..||++||+|||||.|+++|+..++++++..|+..+
T Consensus       294 ek~~~~i~~----~~Rgp~LA~lel~kr~~~~gd-----~ee~~~~y~~kfg~kpcc~~Dl~~yl~~l~~~q~~~l~~~l  364 (932)
T KOG2053|consen  294 EKAQKNIGS----KSRGPYLARLELDKRYKLIGD-----SEEMLSYYFKKFGDKPCCAIDLNHYLGHLNIDQLKSLMSKL  364 (932)
T ss_pred             HHHHHhhcc----cccCcHHHHHHHHHHhcccCC-----hHHHHHHHHHHhCCCcHhHhhHHHhhccCCHHHHHHHHHHh
Confidence            666665533    799999999999998755564     56899999999999999999999999999999999999998


Q ss_pred             HhccCCCCchhHHHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHhhCCCCCCCCcccccccccHHHHHHHHHH
Q 001799          398 KSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLV  477 (1011)
Q Consensus       398 ~~~~~~~~~~~~k~l~~~I~~~Kl~r~lg~~~~~~~~~~~~~~~~l~~~Y~~~l~l~~dl~~tE~qp~Del~LLAa~~Ll  477 (1011)
                      ....+. ++.+.+.+++|+|+.+++|++|.+.++|.++..+.+++|...|++++++++++.|||.++||+|+++|+|.|+
T Consensus       365 ~~~~~~-~s~~~k~l~~h~c~l~~~rl~G~~~~l~ad~i~a~~~kl~~~ye~gls~~K~ll~TE~~~g~~~llLav~~Li  443 (932)
T KOG2053|consen  365 VLADDD-SSGDEKVLQQHLCVLLLLRLLGLYEKLPADSILAYVRKLKLTYEKGLSLSKDLLPTEYSFGDELLLLAVNHLI  443 (932)
T ss_pred             hccCCc-chhhHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHhccccccccccccccccHHHHHHHHHHHHH
Confidence            765444 3467899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCChHHHHHHHHHHHhHhhcCCCchhHHHHHHHHHHHcCChHHHHHHHHhcchhhhhhhhhhhhhhhhhhccCCc
Q 001799          478 QLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLW  557 (1011)
Q Consensus       478 ~l~~~~~~~~~L~~Ai~LLE~~L~~SP~n~~lkLlLvrLY~~LGa~s~A~~~y~~LdvK~IQ~DTLghll~~rl~~s~~~  557 (1011)
                      ++|+++++..++++||++||+++++||||||+|+||+|||+++|+++.|.++|..|||||||+|||||++|+|+.++|.+
T Consensus       444 d~~rktnd~~~l~eaI~LLE~glt~s~hnf~~KLlLiriY~~lGa~p~a~~~y~tLdIK~IQ~DTlgh~~~~~~~t~g~~  523 (932)
T KOG2053|consen  444 DLWRKTNDLTDLFEAITLLENGLTKSPHNFQTKLLLIRIYSYLGAFPDAYELYKTLDIKNIQTDTLGHLIFRRAETSGRS  523 (932)
T ss_pred             HHHHhcCcHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHhcCChhHHHHHHhcchHHhhhccchHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhhHhHHHHHHHHHhccCcccHHhHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCCChhHHHHHHh
Q 001799          558 VESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLE  637 (1011)
Q Consensus       558 ~~~~~l~~~~L~fy~~~~~e~~d~i~~Af~~GsYsKI~efi~F~~RL~~S~~~~~~~vE~~rl~l~~~~~~~~~~~~~l~  637 (1011)
                      ..+.+.++++++||+++.+|+||+|+.||++|+||||+||+.|++||++|.|++.++||+++++++...++.++....++
T Consensus       524 ~~~s~~~~~~lkfy~~~~kE~~eyI~~AYr~g~ySkI~em~~fr~rL~~S~q~~a~~VE~~~l~ll~~~~~~~q~~~~~~  603 (932)
T KOG2053|consen  524 SFASNTFNEHLKFYDSSLKETPEYIALAYRRGAYSKIPEMLAFRDRLMHSLQKWACRVENLQLSLLCNADRGTQLLKLLE  603 (932)
T ss_pred             hhHHHHHHHHHHHHhhhhhhhHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHh
Confidence            88889999999999999999999999999999999999999999999999999999999999999999999998777777


Q ss_pred             hhccCccccccccccCCCcccccccccCCCcCCCCCCCCCcCCCCCCCCCC-chhhhhHHHhhhHHHHHHhhhhhhHHHH
Q 001799          638 NLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYC-PKENLMKEREANILGVVERKSLLPRLIY  716 (1011)
Q Consensus       638 ~l~~~~~~~~l~~e~~~~~L~DNrD~~~~p~w~p~~~~~~~l~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  716 (1011)
                      ++.    .++..++|+|.+|+|||||++||+|+|.+.+         ...| |+|+.+.+++-+..+.+.+| |++++|+
T Consensus       604 ~~~----l~~~e~~I~w~~L~DNRDl~~~~~w~p~~e~---------~~~e~~k~s~kEe~~~l~~rSi~lr-Ll~~~i~  669 (932)
T KOG2053|consen  604 SMK----LPPSEDRIQWVSLSDNRDLNAIPYWDPEDEN---------FAEELKKESFKEETEWLNLRSIFLR-LLRELII  669 (932)
T ss_pred             ccc----cCcchhhcccccccccccccccccCCCcchh---------hHHhhhhcChHHHHHHHHHHHHHHH-HHHHHHH
Confidence            544    5666788999999999999999999999887         2334 56888888887777777777 8999999


Q ss_pred             HHhhccccchhhhhhccCCcCCcchhhhHHHHHHHHHHHhCcchhhhhHHHhhcccCccchhhhchhhhhHHHHHHHHHh
Q 001799          717 LSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNA  796 (1011)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  796 (1011)
                      ++.++....+.+.+|.++   +..+..|++.++++|.+++|+|..++|++.+-.+.|++...-+++        ++||+|
T Consensus       670 l~h~~~~k~~~~salt~~---~mevl~el~~ll~~~t~~~~~~~~~liq~~~~~~~~~r~g~l~~s--------~~f~~~  738 (932)
T KOG2053|consen  670 LAHPNGEKDLEKSALTAK---VMEVLRELELLLEQYTSVLIPSASFLIQFPLLESQGVRLGDLLNS--------LEFLMA  738 (932)
T ss_pred             hcCCCCCcchHHHHHhcc---chHHHHHHHHHHHHHHHhhhhhhHHhhhhhhhccccccccchhhh--------HHHHHH
Confidence            999999999999999888   889999999999999999999999999999999999987765555        999999


Q ss_pred             hccCCccccccCCCCCCcchHHHHHHHHHHHHHhhhcCCcc-ccccCccHHHHHHHhccchhHHHHHHHHHHhhcCCCCc
Q 001799          797 WNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESL-VCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGK  875 (1011)
Q Consensus       797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  875 (1011)
                      |++..++.            |++-.++++.|.  ++++..- +.++-.++++.||-.++|+.||-..+++|.+.++|+++
T Consensus       739 ~~~lv~~~------------~~~s~~l~e~~~--v~t~i~t~l~s~~~~~~~~~q~~~~~~~w~~~~~~~k~~~sl~~~~  804 (932)
T KOG2053|consen  739 VPLLVKDL------------WSVSHPLLELTK--VRTEIITDLISLLRIKDKEVQKEKLPLLWIVDGKLIKALQSLLSLY  804 (932)
T ss_pred             HHHHHHHH------------HhccchHHHHHH--HHHHHHHHHHHHHHHHHHHhhhccCCchhhhhHHHHhhHHHHHHHH
Confidence            99998876            999999999998  3333333 44566789999999999999999999999999999999


Q ss_pred             ccccCCCCC-CCCCcchhhHHHhHHhhhhHHHHHHHHHHhhhCCChhHHHHHHHHHHhhcCCCCCCchhHHhhhhhhhcc
Q 001799          876 KKKRSGSAD-HSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSL  954 (1011)
Q Consensus       876 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  954 (1011)
                      +++|...++ +..|++++|+.++|+-.|  .+.+..|.-.++++||..++..-+....+.+...+||+|..+++.+|+..
T Consensus       805 ~~l~~i~s~~L~~s~~~~av~~pvk~~~--~kk~~~~~~t~~~~~e~~~~~~el~~~~~~~~~n~~~~i~g~~~~~lal~  882 (932)
T KOG2053|consen  805 VFLKNIFSDKLKVSSVPTAVKEPVKLKG--DKKASVQAYTKLKKPECGQVLQELDRKLAENLSNIKNSILGYLKSFLALE  882 (932)
T ss_pred             HHHHHHHhhhhccccccccccchhhhhh--hhHHHHHHHHhhcchHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHhhh
Confidence            999999999 778899999999999999  89999999999999999999999988888888889999999999999999


Q ss_pred             chhhhhhhhhhhccCCChHHHHHHHhhhhhhHHHHHHHHhHHHHHHHHHHH
Q 001799          955 NEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALK 1005 (1011)
Q Consensus       955 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1011)
                      .+++.|.+|++++++ .++||.++.+.....+++||+++|++|++..+.++
T Consensus       883 ~E~~ids~i~~~l~~-~~~d~~~k~~~~~~~~~~e~~~l~e~k~~~~~~lk  932 (932)
T KOG2053|consen  883 LESMIDSSIGPELEG-AKADVEGKHNPSASRLLREFLNLCEDKHTTIKKLK  932 (932)
T ss_pred             hhhccccccchhhhh-hhHhHhhhcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999 99999999999999999999999999999988653

>PF09797 NatB_MDM20: N-acetyltransferase B complex (NatB) non catalytic subunit; InterPro: IPR019183 This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB) Back     alignment and domain information
>KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] Back     alignment and domain information
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PRK11447 cellulose synthase subunit BcsC; Provisional Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>PRK11447 cellulose synthase subunit BcsC; Provisional Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>PRK11788 tetratricopeptide repeat protein; Provisional Back     alignment and domain information
>KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10049 pgaA outer membrane protein PgaA; Provisional Back     alignment and domain information
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK10049 pgaA outer membrane protein PgaA; Provisional Back     alignment and domain information
>PRK12370 invasion protein regulator; Provisional Back     alignment and domain information
>PRK11788 tetratricopeptide repeat protein; Provisional Back     alignment and domain information
>PRK11189 lipoprotein NlpI; Provisional Back     alignment and domain information
>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] Back     alignment and domain information
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B Back     alignment and domain information
>KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14574 hmsH outer membrane protein; Provisional Back     alignment and domain information
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional Back     alignment and domain information
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW Back     alignment and domain information
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK11189 lipoprotein NlpI; Provisional Back     alignment and domain information
>TIGR00540 hemY_coli hemY protein Back     alignment and domain information
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional Back     alignment and domain information
>PRK10747 putative protoheme IX biogenesis protein; Provisional Back     alignment and domain information
>PRK12370 invasion protein regulator; Provisional Back     alignment and domain information
>KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW Back     alignment and domain information
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10747 putative protoheme IX biogenesis protein; Provisional Back     alignment and domain information
>KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00540 hemY_coli hemY protein Back     alignment and domain information
>PRK14574 hmsH outer membrane protein; Provisional Back     alignment and domain information
>PLN02789 farnesyltranstransferase Back     alignment and domain information
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B Back     alignment and domain information
>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO Back     alignment and domain information
>PLN03077 Protein ECB2; Provisional Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1125 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO Back     alignment and domain information
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional Back     alignment and domain information
>PLN03218 maturation of RBCL 1; Provisional Back     alignment and domain information
>COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15359 type III secretion system chaperone protein SscB; Provisional Back     alignment and domain information
>KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala Back     alignment and domain information
>KOG2003 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PLN03218 maturation of RBCL 1; Provisional Back     alignment and domain information
>PLN03077 Protein ECB2; Provisional Back     alignment and domain information
>PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional Back     alignment and domain information
>PRK15359 type III secretion system chaperone protein SscB; Provisional Back     alignment and domain information
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional Back     alignment and domain information
>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals Back     alignment and domain information
>KOG1129 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals Back     alignment and domain information
>KOG1125 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG0553 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02789 farnesyltranstransferase Back     alignment and domain information
>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription] Back     alignment and domain information
>KOG0495 consensus HAT repeat protein [RNA processing and modification] Back     alignment and domain information
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD Back     alignment and domain information
>KOG0495 consensus HAT repeat protein [RNA processing and modification] Back     alignment and domain information
>KOG2003 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional Back     alignment and domain information
>KOG1156 consensus N-terminal acetyltransferase [Chromatin structure and dynamics] Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] Back     alignment and domain information
>COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] Back     alignment and domain information
>KOG1129 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>KOG3060 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF Back     alignment and domain information
>COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1174 consensus Anaphase-promoting complex (APC), subunit 7 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4162 consensus Predicted calmodulin-binding protein [Signal transduction mechanisms] Back     alignment and domain information
>PRK10866 outer membrane biogenesis protein BamD; Provisional Back     alignment and domain information
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A Back     alignment and domain information
>KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10803 tol-pal system protein YbgF; Provisional Back     alignment and domain information
>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG3060 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG1729 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional Back     alignment and domain information
>PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional Back     alignment and domain information
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF Back     alignment and domain information
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C Back     alignment and domain information
>PRK10866 outer membrane biogenesis protein BamD; Provisional Back     alignment and domain information
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C Back     alignment and domain information
>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function Back     alignment and domain information
>PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A Back     alignment and domain information
>PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>CHL00033 ycf3 photosystem I assembly protein Ycf3 Back     alignment and domain information
>PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PRK10153 DNA-binding transcriptional activator CadC; Provisional Back     alignment and domain information
>PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A Back     alignment and domain information
>PRK02603 photosystem I assembly protein Ycf3; Provisional Back     alignment and domain information
>PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi Back     alignment and domain information
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>KOG0553 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1128 consensus Uncharacterized conserved protein, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PRK02603 photosystem I assembly protein Ycf3; Provisional Back     alignment and domain information
>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function Back     alignment and domain information
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A Back     alignment and domain information
>PRK14720 transcript cleavage factor/unknown domain fusion protein; Provisional Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] Back     alignment and domain information
>KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] Back     alignment and domain information
>PRK10803 tol-pal system protein YbgF; Provisional Back     alignment and domain information
>CHL00033 ycf3 photosystem I assembly protein Ycf3 Back     alignment and domain information
>KOG1915 consensus Cell cycle control protein (crooked neck) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG4105 ComL DNA uptake lipoprotein [General function prediction only] Back     alignment and domain information
>KOG1070 consensus rRNA processing protein Rrp5 [RNA processing and modification] Back     alignment and domain information
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A Back     alignment and domain information
>KOG3081 consensus Vesicle coat complex COPI, epsilon subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1915 consensus Cell cycle control protein (crooked neck) [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK04841 transcriptional regulator MalT; Provisional Back     alignment and domain information
>KOG3785 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG0457 NrfG FOG: TPR repeat [General function prediction only] Back     alignment and domain information
>PF13371 TPR_9: Tetratricopeptide repeat Back     alignment and domain information
>PRK11906 transcriptional regulator; Provisional Back     alignment and domain information
>KOG3785 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK15331 chaperone protein SicA; Provisional Back     alignment and domain information
>PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF13512 TPR_18: Tetratricopeptide repeat Back     alignment and domain information
>KOG1128 consensus Uncharacterized conserved protein, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PF12688 TPR_5: Tetratrico peptide repeat Back     alignment and domain information
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A Back     alignment and domain information
>COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] Back     alignment and domain information
>KOG4340 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13371 TPR_9: Tetratricopeptide repeat Back     alignment and domain information
>PRK04841 transcriptional regulator MalT; Provisional Back     alignment and domain information
>KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] Back     alignment and domain information
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional Back     alignment and domain information
>PRK15331 chaperone protein SicA; Provisional Back     alignment and domain information
>PF13512 TPR_18: Tetratricopeptide repeat Back     alignment and domain information
>KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] Back     alignment and domain information
>KOG1070 consensus rRNA processing protein Rrp5 [RNA processing and modification] Back     alignment and domain information
>PF04184 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for suppression of tumorigenicity 7) protein is thought to be a tumour suppressor gene Back     alignment and domain information
>KOG4234 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>COG1729 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG0457 NrfG FOG: TPR repeat [General function prediction only] Back     alignment and domain information
>PRK10153 DNA-binding transcriptional activator CadC; Provisional Back     alignment and domain information
>PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins Back     alignment and domain information
>PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A Back     alignment and domain information
>COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] Back     alignment and domain information
>KOG4340 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13428 TPR_14: Tetratricopeptide repeat Back     alignment and domain information
>KOG2047 consensus mRNA splicing factor [RNA processing and modification] Back     alignment and domain information
>COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PF09295 ChAPs: ChAPs (Chs5p-Arf1p-binding proteins); InterPro: IPR015374 ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialised cargo from the Golgi Back     alignment and domain information
>PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional Back     alignment and domain information
>COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown] Back     alignment and domain information
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] Back     alignment and domain information
>PRK11906 transcriptional regulator; Provisional Back     alignment and domain information
>PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A Back     alignment and domain information
>COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3898 Uncharacterized membrane-bound protein [Function unknown] Back     alignment and domain information
>KOG3081 consensus Vesicle coat complex COPI, epsilon subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12688 TPR_5: Tetratrico peptide repeat Back     alignment and domain information
>PF13428 TPR_14: Tetratricopeptide repeat Back     alignment and domain information
>COG4105 ComL DNA uptake lipoprotein [General function prediction only] Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis [] Back     alignment and domain information
>PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins Back     alignment and domain information
>COG2976 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13281 DUF4071: Domain of unknown function (DUF4071) Back     alignment and domain information
>PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins Back     alignment and domain information
>PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production Back     alignment and domain information
>KOG2610 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG4555 consensus TPR repeat-containing protein [Function unknown] Back     alignment and domain information
>COG2909 MalT ATP-dependent transcriptional regulator [Transcription] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>PF13431 TPR_17: Tetratricopeptide repeat Back     alignment and domain information
>KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] Back     alignment and domain information
>PF08424 NRDE-2: NRDE-2, necessary for RNA interference; InterPro: IPR013633 This is domain is found in eukaryotic proteins of unknown function Back     alignment and domain information
>PF13281 DUF4071: Domain of unknown function (DUF4071) Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>COG2976 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13431 TPR_17: Tetratricopeptide repeat Back     alignment and domain information
>COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins Back     alignment and domain information
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] Back     alignment and domain information
>PF10300 DUF3808: Protein of unknown function (DUF3808); InterPro: IPR019412 This entry represents a family of proteins conserved from fungi to humans Back     alignment and domain information
>KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] Back     alignment and domain information
>KOG2300 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG2471 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A Back     alignment and domain information
>PF10300 DUF3808: Protein of unknown function (DUF3808); InterPro: IPR019412 This entry represents a family of proteins conserved from fungi to humans Back     alignment and domain information
>KOG2610 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1585 consensus Protein required for fusion of vesicles in vesicular transport, gamma-SNAP [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG4555 consensus TPR repeat-containing protein [Function unknown] Back     alignment and domain information
>KOG2796 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A Back     alignment and domain information
>KOG4234 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG2047 consensus mRNA splicing factor [RNA processing and modification] Back     alignment and domain information
>KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] Back     alignment and domain information
>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A Back     alignment and domain information
>KOG2796 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A Back     alignment and domain information
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases Back     alignment and domain information
>KOG0530 consensus Protein farnesyltransferase, alpha subunit/protein geranylgeranyltransferase type I, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2471 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production Back     alignment and domain information
>COG3898 Uncharacterized membrane-bound protein [Function unknown] Back     alignment and domain information
>PF14561 TPR_20: Tetratricopeptide repeat; PDB: 3QOU_A 2R5S_A 3QDN_B Back     alignment and domain information
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A Back     alignment and domain information
>smart00028 TPR Tetratricopeptide repeats Back     alignment and domain information
>KOG1464 consensus COP9 signalosome, subunit CSN2 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG4507 consensus Uncharacterized conserved protein, contains TPR repeats [Function unknown] Back     alignment and domain information
>PRK10941 hypothetical protein; Provisional Back     alignment and domain information
>PF12968 DUF3856: Domain of Unknown Function (DUF3856); InterPro: IPR024552 This domain of unknown function is found in a small group of tetratricopeptide-like proteins, which includes the uncharacterised protein Q8KAL8 from SWISSPROT Back     alignment and domain information
>KOG1914 consensus mRNA cleavage and polyadenylation factor I complex, subunit RNA14 [RNA processing and modification] Back     alignment and domain information
>KOG3824 consensus Huntingtin interacting protein HYPE [General function prediction only] Back     alignment and domain information
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] Back     alignment and domain information
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional Back     alignment and domain information
>PF14853 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repeat; PDB: 1IYG_A 1PC2_A 1NZN_A 3UUX_C 1Y8M_A 2PQR_A 2PQN_A 3O48_A Back     alignment and domain information
>PF14853 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repeat; PDB: 1IYG_A 1PC2_A 1NZN_A 3UUX_C 1Y8M_A 2PQR_A 2PQN_A 3O48_A Back     alignment and domain information
>COG2909 MalT ATP-dependent transcriptional regulator [Transcription] Back     alignment and domain information
>PF04184 ST7: ST7 protein; InterPro: IPR007311 The ST7 (for suppression of tumorigenicity 7) protein is thought to be a tumour suppressor gene Back     alignment and domain information
>PF08424 NRDE-2: NRDE-2, necessary for RNA interference; InterPro: IPR013633 This is domain is found in eukaryotic proteins of unknown function Back     alignment and domain information
>PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function Back     alignment and domain information
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A Back     alignment and domain information
>PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases Back     alignment and domain information
>KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10941 hypothetical protein; Provisional Back     alignment and domain information
>KOG3616 consensus Selective LIM binding factor [Transcription] Back     alignment and domain information
>KOG0985 consensus Vesicle coat protein clathrin, heavy chain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04910 Tcf25: Transcriptional repressor TCF25; InterPro: IPR006994 This entry appears to represent a novel family of basic helix-loop-helix (bHLH) proteins that control differentiation and development of a variety of organs [, ] Back     alignment and domain information
>KOG1585 consensus Protein required for fusion of vesicles in vesicular transport, gamma-SNAP [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09613 HrpB1_HrpK: Bacterial type III secretion protein (HrpB1_HrpK); InterPro: IPR013394 This family of proteins is encoded by genes found within type III secretion operons in a limited range of species including Xanthomonas, Ralstonia and Burkholderia Back     alignment and domain information
>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] Back     alignment and domain information
>KOG1310 consensus WD40 repeat protein [General function prediction only] Back     alignment and domain information
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A Back     alignment and domain information
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00028 TPR Tetratricopeptide repeats Back     alignment and domain information
>PF14863 Alkyl_sulf_dimr: Alkyl sulfatase dimerisation; PDB: 2YHE_C 2CG2_A 2CG3_A 2CFU_A 2CFZ_A Back     alignment and domain information
>KOG0985 consensus Vesicle coat protein clathrin, heavy chain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2396 consensus HAT (Half-A-TPR) repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG0529 consensus Protein geranylgeranyltransferase type II, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2396 consensus HAT (Half-A-TPR) repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF14561 TPR_20: Tetratricopeptide repeat; PDB: 3QOU_A 2R5S_A 3QDN_B Back     alignment and domain information
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG3824 consensus Huntingtin interacting protein HYPE [General function prediction only] Back     alignment and domain information
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] Back     alignment and domain information
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] Back     alignment and domain information
>KOG3616 consensus Selective LIM binding factor [Transcription] Back     alignment and domain information
>COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1011
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-12
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 1e-08
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 3e-05
1w3b_A388 UDP-N-acetylglucosamine--peptide N-acetylglucosami 4e-07
1w3b_A388 UDP-N-acetylglucosamine--peptide N-acetylglucosami 3e-05
1w3b_A388 UDP-N-acetylglucosamine--peptide N-acetylglucosami 4e-04
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 7e-07
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 5e-06
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-06
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 2e-06
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 5e-06
4g1t_A472 Interferon-induced protein with tetratricopeptide 2e-06
4g1t_A472 Interferon-induced protein with tetratricopeptide 1e-05
4g1t_A472 Interferon-induced protein with tetratricopeptide 4e-04
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 5e-06
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 4e-05
2r5s_A176 Uncharacterized protein VP0806; APC090868.1, vibri 5e-05
3urz_A208 Uncharacterized protein; tetratricopeptide repeats 7e-05
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 2e-04
1hz4_A373 MALT regulatory protein; two-helix bundles, helix 2e-04
3cv0_A327 Peroxisome targeting signal 1 receptor PEX5; TPR m 2e-04
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 3e-04
4eqf_A365 PEX5-related protein; accessory protein, tetratric 5e-04
2gw1_A514 Mitochondrial precursor proteins import receptor; 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 77.6 bits (190), Expect = 2e-14
 Identities = 98/648 (15%), Positives = 202/648 (31%), Gaps = 195/648 (30%)

Query: 102 LDLATSCYEYACGK-YHNNMDHMMGLFNCY-VREYS---FVKQQQTAIKMYKHAGEE-RF 155
           +D  T  ++Y          D  +  F+C  V++       K++   I M K A      
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 156 LLWAVCSIQLQVLCGNGGEKLLLLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDA 215
           L W         L     E +    E +L+ +              Y  ++         
Sbjct: 67  LFW--------TLLSKQEEMVQKFVEEVLRIN--------------YKFLMSPIKT---- 100

Query: 216 LEILSGTLGSLLVIE-VDKLRMQGRLLA-----RQGDYTAAAQIYKKILELSPDDWECFL 269
            E    ++ + + IE  D+L    ++ A     R   Y    ++ + +LEL P      +
Sbjct: 101 -EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL---KLRQALLELRPAKN-VLI 155

Query: 270 H-YLGC--------LLEDDS---------SW-----CNAASSDPIHPQKSVDCKFSHLTD 306
              LG         +               W     CN+  +     QK       +  D
Sbjct: 156 DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK-----LLYQID 210

Query: 307 EVFNSRISEASTSVKKLHADTSVNLIRCPYLANLEIERRKLLYGKNNNDELMEAVLEYFL 366
             + SR   +S    ++H              +++ E R+LL  K   + L+  VL    
Sbjct: 211 PNWTSRSDHSSNIKLRIH--------------SIQAELRRLLKSKPYENCLL--VLL--- 251

Query: 367 SFGHLACFTSDVED------F-----LLVLSLDKKTELLERLKSSSTSHSTESIKELGWF 415
                     +V++      F     +L+ +  K  ++ + L +++T+H   S+      
Sbjct: 252 ----------NVQNAKAWNAFNLSCKILLTTRFK--QVTDFLSAATTTH--ISLDHHSMT 297

Query: 416 ITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLS--------------------- 454
           +T  +++ L+         +L R  +  +      +  S                     
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 455 ------KDLDPQESIHGEELLSM-------ASNVLVQLFWRTSNYGYFMEAIMV-LEFGL 500
                   L+P E     + LS+        + +L  L W        +  ++  L    
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL-SLIWFDVIK-SDVMVVVNKLHKYS 415

Query: 501 TVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVES 560
            V +   +  + +  +Y               L++K  L    + H   + +V     + 
Sbjct: 416 LVEKQPKESTISIPSIY---------------LELKVKLENEYALH---RSIV-----DH 452

Query: 561 NNLLRDYLRFMDDHLRESAD---LTFLAYRH----RNYSKVIE---------FVQFKERL 604
            N+ + +    DD +    D    + + + H     +  ++           F++ K R 
Sbjct: 453 YNIPKTF--DSDDLIPPYLDQYFYSHIGH-HLKNIEHPERMTLFRMVFLDFRFLEQKIRH 509

Query: 605 QRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGV-DFLELSNE 651
             ++      + +++ QLK     I + +   E L   + DFL    E
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEE 557
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Length = 597 Back     alignment and structure
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 Back     alignment and structure
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 Back     alignment and structure
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 Length = 388 Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Length = 472 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} Length = 176 Back     alignment and structure
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} Length = 208 Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Length = 330 Back     alignment and structure
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 Length = 373 Back     alignment and structure
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A Length = 327 Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Length = 368 Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Length = 365 Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1011
d1w3ba_388 a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, 8e-10
d1w3ba_388 a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, 9e-08
d1fcha_323 a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting 1e-04
d1dcea1334 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltr 5e-04
d2c2la1201 a.118.8.1 (A:24-224) STIP1 homology and U box-cont 0.003
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (143), Expect = 8e-10
 Identities = 37/280 (13%), Positives = 72/280 (25%), Gaps = 24/280 (8%)

Query: 27  QFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDL----------- 75
            F+ A +    L  + P++   L L + +  +  + D S   S  A              
Sbjct: 14  DFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNL 73

Query: 76  -----LYQNDSTLMDDLTLSTLQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCY 130
                        ++    +           ++LA +       +           +N  
Sbjct: 74  GNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPD 133

Query: 131 VREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLLLL-----AEGLLK 185
           +                    +  +L          V   N G           A    +
Sbjct: 134 LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFE 193

Query: 186 KHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQG 245
           K V        +A I   ++L++   +  A+        SL             +   QG
Sbjct: 194 KAVTLDPNF-LDAYINLGNVLKEARIFDRAVAAYL-RALSLSPNHAVVHGNLACVYYEQG 251

Query: 246 DYTAAAQIYKKILELSPDDWECFLHYLGCLLEDDSSWCNA 285
               A   Y++ +EL P   +     L   L++  S   A
Sbjct: 252 LIDLAIDTYRRAIELQPHFPDA-YCNLANALKEKGSVAEA 290
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 334 Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1011
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 99.94
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 99.9
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 99.89
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 99.84
d2h6fa1315 Protein farnesyltransferase alpha-subunit {Human ( 99.79
d1xnfa_259 Lipoprotein NlpI {Escherichia coli [TaxId: 562]} 99.75
d1dcea1334 Rab geranylgeranyltransferase alpha-subunit, N-ter 99.73
d2h6fa1315 Protein farnesyltransferase alpha-subunit {Human ( 99.68
d1xnfa_259 Lipoprotein NlpI {Escherichia coli [TaxId: 562]} 99.66
d1hz4a_366 Transcription factor MalT domain III {Escherichia 99.51
d2onda1308 Cleavage stimulation factor 77 kDa subunit CSTF3 { 99.46
d1dcea1334 Rab geranylgeranyltransferase alpha-subunit, N-ter 99.43
d1elwa_117 Hop {Human (Homo sapiens) [TaxId: 9606]} 99.4
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 99.37
d1hz4a_366 Transcription factor MalT domain III {Escherichia 99.27
d2c2la1201 STIP1 homology and U box-containing protein 1, STU 99.25
d1hh8a_192 Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H 99.24
d2onda1308 Cleavage stimulation factor 77 kDa subunit CSTF3 { 99.21
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 99.18
d1elwa_117 Hop {Human (Homo sapiens) [TaxId: 9606]} 99.13
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 99.12
d2c2la1201 STIP1 homology and U box-containing protein 1, STU 99.12
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 99.1
d1ihga1169 Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} 99.08
d2fbna1153 Putative 70 kda peptidylprolyl isomerase PFL2275c 99.06
d1qqea_290 Vesicular transport protein sec17 {Baker's yeast ( 99.04
d1ya0a1497 SMG-7 {Human (Homo sapiens) [TaxId: 9606]} 99.0
d1hh8a_192 Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H 98.99
d1qqea_290 Vesicular transport protein sec17 {Baker's yeast ( 98.97
d1nzna_122 Mitochondria fission protein Fis1 {Human (Homo sap 98.96
d1zu2a1145 Mitochondrial import receptor subunit tom20-3 {Tha 98.93
d1hxia_112 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 98.93
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 98.89
d1hxia_112 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 98.88
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 98.85
d2fbna1153 Putative 70 kda peptidylprolyl isomerase PFL2275c 98.83
d1zbpa1264 Hypothetical protein VPA1032 {Vibrio parahaemolyti 98.77
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 98.76
d1ya0a1497 SMG-7 {Human (Homo sapiens) [TaxId: 9606]} 98.67
d1ihga1169 Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} 98.65
d1zu2a1145 Mitochondrial import receptor subunit tom20-3 {Tha 98.61
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 98.56
d2hr2a1156 Hypothetical protein CT2138 {Chlorobium tepidum [T 98.55
d1ouva_265 Cysteine rich protein C (HcpC) {Helicobacter pylor 98.52
d1nzna_122 Mitochondria fission protein Fis1 {Human (Homo sap 98.49
d1zbpa1264 Hypothetical protein VPA1032 {Vibrio parahaemolyti 98.42
d2ff4a2179 Probable regulatory protein EmbR, middle domain {M 98.35
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 98.28
d2ff4a2179 Probable regulatory protein EmbR, middle domain {M 98.18
d2hr2a1156 Hypothetical protein CT2138 {Chlorobium tepidum [T 98.17
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 97.84
d1ouva_265 Cysteine rich protein C (HcpC) {Helicobacter pylor 97.66
d2pqrb1124 Mitochondria fission protein Fis1 {Baker's yeast ( 96.89
d2pqrb1124 Mitochondria fission protein Fis1 {Baker's yeast ( 96.58
d1klxa_133 Cysteine rich protein B (HcpB) {Helicobacter pylor 95.7
d1klxa_133 Cysteine rich protein B (HcpB) {Helicobacter pylor 91.4
d2cfua2505 Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI 85.54
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.9e-20  Score=148.05  Aligned_cols=246  Identities=15%  Similarity=0.060  Sum_probs=195.3

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             99999983998999999999997399999999999999998799489999999999864107899991999999999999
Q 001799           18 PIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNDSTLMDDLTLSTLQIVFQ   97 (1011)
Q Consensus        18 ~I~dald~gn~KqAL~l~eklLKk~P~~~~a~aLKA~iL~rlgk~eEAl~ll~~alelL~~d~~~P~D~~al~~Lg~il~   97 (1011)
                      -...++..|+|++|++.++++++.+|+++.++..+|.++.++|++++|+..++++++.      .|.+..++..+|.+|.
T Consensus         5 la~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~a~~~l~~~~~   78 (388)
T d1w3ba_           5 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ------NPLLAEAYSNLGNVYK   78 (388)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHH
T ss_conf             9999998699999999999999868998999999999999869999999999999985------9998999999999964


Q ss_pred             HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf             86998999999999998479998889999999999269999999999999980992999999999999984289688999
Q 001799           98 RLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCGNGGEKLL  177 (1011)
Q Consensus        98 ~lg~~deAi~~yekAik~~P~n~el~~~Lf~ay~r~~d~~~Aqq~a~kL~K~~P~~ry~~Wai~sl~Lq~~~~~~a~kll  177 (1011)
                      ..|++++|+..|+.+.+..|.+................+..+...........+.... .+.......  ......    
T Consensus        79 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~----  151 (388)
T d1w3ba_          79 ERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYC-VRSDLGNLL--KALGRL----  151 (388)
T ss_dssp             HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTH-HHHHHHHHH--HTTSCH----
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC--CCCCHH----
T ss_conf             2000222222222121122222222222222222222222222221112222222222-222222222--110001----


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             99999999888329999799999999999986996899999995230658874999999999999869999999999999
Q 001799          178 LLAEGLLKKHVASHSLHEPEALIVYISILEQQSKYGDALEILSGTLGSLLVIEVDKLRMQGRLLARQGDYTAAAQIYKKI  257 (1011)
Q Consensus       178 ~LAek~Lekai~~~p~~~~eel~ll~~IL~~qgk~eEAL~~L~~~l~~~~~~~~~~l~l~A~ll~klg~~eeA~~~~~kl  257 (1011)
                      ..+.....+.....| ........++.++...+++++|...++..+.. .|..+..+..+|.++...|++++|...+++.
T Consensus       152 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~  229 (388)
T d1w3ba_         152 EEAKACYLKAIETQP-NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL-DPNFLDAYINLGNVLKEARIFDRAVAAYLRA  229 (388)
T ss_dssp             HHHHHHHHHHHHHCT-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCC-CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             356788887402586-10689986363010247199999999999984-9464999999715522005299999999985


Q ss_pred             HHHCCCCHHHHHHHHHHHHCC
Q ss_conf             996999999999999997315
Q 001799          258 LELSPDDWECFLHYLGCLLED  278 (1011)
Q Consensus       258 L~~nPDdw~~~~~ll~all~~  278 (1011)
                      +..+|++...+..+..+....
T Consensus       230 ~~~~~~~~~~~~~l~~~~~~~  250 (388)
T d1w3ba_         230 LSLSPNHAVVHGNLACVYYEQ  250 (388)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHC
T ss_conf             777554799999999999987
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} Back     information, alignment and structure
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure