Citrus Sinensis ID: 001813

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010
MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYSER
ccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccccHHEEEEcccccccccEEHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHccHHHHHHHHHHHHcccEEEEccEEEEEccccccHHHHHHHHHcHHHHHHHHccccccEEEEcccccccHHHHHHHHHHccccEEEEEEccHHHHHHHcccccEEEEEEEcccccccccEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEccccEEEEcccccEEEEEEEEccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccccccccccEEcccccccccEEEccccEEEEEEccccEEEEEEEcccccEEEEEEEEEEEEcccccccccccccEEEccccccccccccccEEEEEEccccEEEEEEEcccEEEEEEEEEccccEEEEEEEEEEEccccccEEEEEEEEEccccccEEEEcccccccccccccccccccccccccccccEEEcccEEEEEEccEEEEEEEccccccccccccEEEEEEccccccccccccccccccccccccccccEEEEcEEEEEEccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEcccccccccccEEEEcccccccccccEEEEccccccHHHHHHHHccEEEEEcccccccccccccccccccccEEEEcccEEEEEEEEEEEcc
ccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccEEEHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHccHHHHHHHHHHHHcccEEEcccccccEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEccHHHHHHHHHcccccEEEEEEcHHHHHHHHHccccEEEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHcccccccEEEccEcccEcccccEccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHccccccccccEEccccccEEEEEEccccccccEEEEEEccccEEEEEcccccEEEEEEEEcccHHHccccccEEEEccccccccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccEEEEccEEEEEEccccccEEEEEEccccEEEEEEEEEEEEEccccccccccccEEEEccccccccccccccEEEEEEccHHHHHHHHccHHHHHEEEEccccccEEEEEEEccEEcccccccEEEEEEEEEcccccEEEEccccHHHHHHHHcccccccccccccHHHHcEEEccEEEEEcccEEEEEEEcccEEEEcccccEEEEEEEEEEcccccccccccEccccccccccccEEEEcEEEEEEcccccHHHHHHHHHHHHccccEEccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEEHHccccccccccccEEEEHHHccccccEEEEEEEEccccccHHHHHHHcccccccccccccccccccccccccccEEEEcccEEEEEEEEEEccc
MANQVCLVVVLFLCLLCVESKYMMyntsagivpgkinvhlvphshddvgwlktvDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSgqlelinggmcmhdeaaphyidmidqttlGHRYIKEqfnvtprigwqidpfghSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASkslgssaqimtgispknyeppsdnfyfevgdtspivqddmnlfdynvpeRVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQdgrvnalystpsmyidakyaaneswplktddffpyadrenaywtgyftsrpalkgYVRTMSAYYLAARQLEFfkgrnevglsTDSLADALALVQhhdavsgtekqhVADDYAKRLSIGYTEAEKVVAASLACLTefskngcvnpitnfqqcpllnisycppsevdlssgkSLVVVVYnplgwkrediiripvinenvtvkdskgkviesqllpllkdsmslrnsystaylgkstnvtpsywlafsasvpplgfnTYIISSAKQaashsgmrtvyksqirqndtievgpgnlkllYSGKRAKLMRYINSKTSVNKLLEQSYIyyrgddgskdlqpsgayifrpngtypiepegqlsftilrgplldevhqRINPWIYQVTrvykgkdhaeieftvgpipiddgigKEVVTQITSNmisnktfytdssgrDFIERIRDYRKDwnlevnqpiagnyypvnlgiymkdnsseLSILVdrsvggssiadGQLELMLHRRlvaddnrgvseALNETvcvfdkcegltiigkyylridpvgeAAKWRRSfgqeiyspfllafteqdgdhwanshlatysamdttyvlpdnvALITLQELDSGKILLRLAHLYeieedtdlsvmSSVELkkvfpkkkiSKVTEMNLSANQERAVMEKKRLVWRvegsskeqptavrgspvdpaklvvELAPMEIRTFVIEFYSER
MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRaskslgssaqIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHdavsgtekqhVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPlgwkrediiripvinenvtvkdskgkviesqllpllkdsmSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSqirqndtievgpgnlKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFtvgpipiddgiGKEVVTQITsnmisnktfytdssgrdFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEAlnetvcvfdkcegltiiGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIeedtdlsvmssvelkkvfpkkkiskvtemnlsanqeravmeKKRLVWRvegsskeqptavrgspvdpaklvVELAPMEIRTFVIEFYSER
MANQvclvvvlflcllcvESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGlstdsladalalVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELkkvfpkkkiskVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYSER
***QVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRAS***********************NFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSA*********RTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVF**************************LVW********************AKLVVELAPMEIRTFVIEFY***
***QVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPS******GKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSA*********************TIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYY*******************IYSPFLLAFTEQD************SA**TTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVW***********************VVELAPMEIRTFVIEFYSE*
MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISS************VYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWR***************PVDPAKLVVELAPMEIRTFVIEFYSER
MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQ*****************NDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVE****************PAKLVVELAPMEIRTFVIEFYS**
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MANQVCLVVVLFLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYSER
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1010 2.2.26 [Sep-21-2011]
Q8VHC81007 Lysosomal alpha-mannosida yes no 0.912 0.915 0.406 0.0
P340981010 Lysosomal alpha-mannosida yes no 0.947 0.947 0.389 0.0
O007541011 Lysosomal alpha-mannosida yes no 0.922 0.921 0.403 0.0
O091591013 Lysosomal alpha-mannosida yes no 0.948 0.945 0.392 0.0
Q60HE91012 Lysosomal alpha-mannosida N/A no 0.922 0.920 0.402 0.0
O464321007 Lysosomal alpha-mannosida N/A no 0.919 0.922 0.402 0.0
Q29451999 Lysosomal alpha-mannosida yes no 0.926 0.936 0.396 0.0
O547821018 Epididymis-specific alpha no no 0.888 0.881 0.274 5e-83
P270461150 Alpha-mannosidase 2 OS=Mu no no 0.726 0.638 0.283 5e-82
Q28949995 Epididymis-specific alpha no no 0.874 0.887 0.282 1e-81
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/1006 (40%), Positives = 579/1006 (57%), Gaps = 84/1006 (8%)

Query: 25   YNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVAD 84
            Y T   + PG +NVHLV H+HDDVGWLKTVDQYY G +N +Q A VQ +LDS+I AL+A+
Sbjct: 50   YETCPMVQPGMLNVHLVAHTHDDVGWLKTVDQYYWGIHNDLQQAGVQYILDSVISALLAE 109

Query: 85   KNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQ 144
              R+F+YVE AFF RWW  Q+ E Q VV++LV  G+LE  NGG  M+DEAA HY  ++DQ
Sbjct: 110  PTRRFVYVEMAFFSRWWHQQTNETQEVVRRLVRQGRLEFANGGWVMNDEAATHYGAIVDQ 169

Query: 145  TTLGHRYIKEQF--NVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRI 202
             TLG R++++ F  +  PR+ W IDPFGHS  QA L  A++GFD +FF RIDYQD+  R 
Sbjct: 170  MTLGLRFLEDTFGSDGRPRVAWHIDPFGHSREQASLF-AQMGFDGVFFGRIDYQDKLVRK 228

Query: 203  NEKTLEVVWRASKSLGS-SAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNV 261
              + +E+VWRAS SL + +A + TG+ P NY PP +   ++V    P V DD    +YN 
Sbjct: 229  KRREMELVWRASASLKAPAADLFTGVLPNNYGPP-EGLCWDVLCADPPVVDDPRSPEYNA 287

Query: 262  PERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD----GRV 317
             + V+ F+  A AQ    RTNH + TMG+DF+Y+ A+TWF+ +DK I  VN       RV
Sbjct: 288  KKLVSYFLQLATAQGRYYRTNHTVMTMGSDFQYENANTWFKNLDKLIQLVNMQQANGSRV 347

Query: 318  NALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYY 377
            + LYSTP+ Y+     AN +WP+K DDFFPYAD  + +WTGYF+SRPALK Y R    + 
Sbjct: 348  HVLYSTPACYLWELNKANLTWPVKEDDFFPYADGPHMFWTGYFSSRPALKRYERLSYNFL 407

Query: 378  LAARQLEFFKG-RNEVGL----STDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGY 432
                QLE   G    VG      +  L  A+A++QHHDAVSGT KQHVADDYA++L+ G+
Sbjct: 408  QVCNQLEAQVGPAANVGPYGHGDSSPLNQAMAVLQHHDAVSGTSKQHVADDYARQLAAGW 467

Query: 433  TEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNP 492
               E +++ +LA L+   +         F  C  LNIS CP S+    + +   V+VYNP
Sbjct: 468  GPCEVLLSNALAKLSGSKET--------FLFCRDLNISICPFSQ----TSERFQVLVYNP 515

Query: 493  LGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPS 552
            LG K + ++R+PV      +KD     + S ++ L                  +++  P 
Sbjct: 516  LGRKVDRMVRLPVRKGLFLIKDPGNNTVPSTVVEL------------------TSSGNPE 557

Query: 553  YWLAFSASVPPLGFNTYIISSAK----QAASHSGMRTVYKSQIR--QNDTIEVGPGNLKL 606
              L F A VP LGF+ Y ++       Q  S       Y S +   +N+ +         
Sbjct: 558  --LLFPALVPALGFSVYSVTRVSDQNPQTRSQHSRPQKYSSPVLSIKNEYLRASFHPDTG 615

Query: 607  LYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSK-DLQPSGAYIFRPNGTYPIEPEG 665
            L S     ++  ++ K ++   + Q++ +Y    G K   Q SGAYIFRP+  +P  P  
Sbjct: 616  LLS-----MIEVLDRKLTLP--VNQAFFWYNASVGDKRSSQASGAYIFRPSQQWPF-PVS 667

Query: 666  QLSFT-ILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQI 724
             L+ T +++  L+ EVHQ    W  QV R+Y G+ H E+E+TVGPIP+ D  GKE++++ 
Sbjct: 668  HLARTRLVKTALVQEVHQNFTAWCSQVVRLYSGQRHLELEWTVGPIPVGDKWGKEIISRF 727

Query: 725  TSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSI 784
             + + +   F+TDS+GR+ +ER RDYR  W L   +P+AGNYYPVN  IY+ D   +L++
Sbjct: 728  DTPLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQLTV 787

Query: 785  LVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRID 844
            L DRS GGSS++DG LELM+HRRL+ DD RGV EAL E         G  + G++ L +D
Sbjct: 788  LTDRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQE------PGSGGWVRGRHLLLLD 841

Query: 845  PVGEAAKWRRSFGQ-EIYSPFLLAFTEQDGDHWANSHLAT----YSAMDTTYVLPDNVAL 899
               EAA   R   + E+ +P L+    Q   +  + H A     +S +     LP +V L
Sbjct: 842  TAREAAAEHRLLAEKELLAPQLVLAPGQGPSYHHDHHEAVPRKQFSGLRRQ--LPPSVRL 899

Query: 900  ITLQELDSGKILLRLAHLYEIEEDT--DLSVMSSVELKKVFPKKKISKVTEMNLSANQER 957
            +TL       +LLRL H + + ED+  +LS+  +++L+ +F    I+++ E  L+ANQ R
Sbjct: 900  LTLARWGPDTLLLRLEHQFALGEDSSRNLSLPVTLDLQDLFSTFTITRLQETTLAANQLR 959

Query: 958  AVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFV 1003
            A     RL W  E     +P   R   +DP+   + L PMEIRTFV
Sbjct: 960  A--SASRLKWTTEIDPISRPAVPR---LDPSS--ITLQPMEIRTFV 998
Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.
Cavia porcellus (taxid: 10141)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 Back     alignment and function description
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 Back     alignment and function description
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|O54782|MA2B2_MOUSE Epididymis-specific alpha-mannosidase OS=Mus musculus GN=Man2b2 PE=2 SV=2 Back     alignment and function description
>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 Back     alignment and function description
>sp|Q28949|MA2B2_PIG Epididymis-specific alpha-mannosidase OS=Sus scrofa GN=MAN2B2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1010
2555400591012 lysosomal alpha-mannosidase, putative [R 0.995 0.993 0.775 0.0
2241221761012 predicted protein [Populus trichocarpa] 0.988 0.986 0.775 0.0
3594914641016 PREDICTED: lysosomal alpha-mannosidase [ 0.992 0.986 0.749 0.0
3565088691011 PREDICTED: lysosomal alpha-mannosidase-l 0.985 0.984 0.741 0.0
4405465881024 alpha-mannosidase [Prunus persica] 0.990 0.976 0.734 0.0
2254564811009 PREDICTED: lysosomal alpha-mannosidase [ 0.975 0.976 0.742 0.0
3594885531025 PREDICTED: lysosomal alpha-mannosidase-l 0.995 0.980 0.734 0.0
3565164871012 PREDICTED: lysosomal alpha-mannosidase-l 0.988 0.986 0.727 0.0
3505383591028 alpha-mannosidase precursor [Solanum lyc 0.991 0.973 0.721 0.0
3154408011030 alpha-mannosidase [Capsicum annuum] 0.994 0.974 0.718 0.0
>gi|255540059|ref|XP_002511094.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223550209|gb|EEF51696.1| lysosomal alpha-mannosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1686 bits (4365), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 786/1013 (77%), Positives = 894/1013 (88%), Gaps = 8/1013 (0%)

Query: 1    MANQVCLVVVL--FLCLLCVESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYY 58
            M  Q C ++VL    CL  VESKYM+YNT+A IVPGKINVHLVPH+HDDVGWLKT+DQYY
Sbjct: 1    MVIQACFLIVLSSIFCL-SVESKYMVYNTTASIVPGKINVHLVPHTHDDVGWLKTMDQYY 59

Query: 59   VGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNS 118
            VGSNNSIQ ACVQN+LDSL+PAL+ADKNRKFIYVEQAFFQRWW +QSEEVQ +VK+LV+S
Sbjct: 60   VGSNNSIQGACVQNILDSLVPALLADKNRKFIYVEQAFFQRWWNEQSEEVQKIVKKLVSS 119

Query: 119  GQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYL 178
            GQLELINGGMCMHDEAA HYIDMIDQTTLGH++IK++FN+TPRIGWQIDPFGHSAVQ YL
Sbjct: 120  GQLELINGGMCMHDEAATHYIDMIDQTTLGHKFIKQEFNLTPRIGWQIDPFGHSAVQGYL 179

Query: 179  LSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDN 238
            L AEVGFD +FFARIDYQDR+KR +EK+LEVVWR SKSLGSSAQI  G  PKNYEPPSDN
Sbjct: 180  LGAEVGFDSIFFARIDYQDRSKRKDEKSLEVVWRGSKSLGSSAQIFAGAFPKNYEPPSDN 239

Query: 239  FYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAH 298
            FYFEV D SPIVQDD+NLFDYNVP+RVNDFVSAA++QANITRTNHIMWTMGTDFKYQYAH
Sbjct: 240  FYFEVNDESPIVQDDINLFDYNVPDRVNDFVSAAMSQANITRTNHIMWTMGTDFKYQYAH 299

Query: 299  TWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTG 358
            +WF+QMDKFIHYVNQDGRVNA YSTPS+Y DAKYAANESWPLKTDD+FPYAD  NAYWTG
Sbjct: 300  SWFKQMDKFIHYVNQDGRVNAFYSTPSIYTDAKYAANESWPLKTDDYFPYADDVNAYWTG 359

Query: 359  YFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQ 418
            YFTSRPA+KGYVRT+S YYLAARQLEF KGR++ G +TDSLA+ALA+ QHHDAV+GTEKQ
Sbjct: 360  YFTSRPAIKGYVRTISGYYLAARQLEFLKGRSKAGSNTDSLANALAVAQHHDAVTGTEKQ 419

Query: 419  HVADDYAKRLSIGYTEAEKVVAASLACLTEFS-KNGCVNPITNFQQCPLLNISYCPPSEV 477
            HVADDYAKRLSIGY EAEKVV  SL+C+ E   +  C N    FQQCPLLNISYCP SEV
Sbjct: 420  HVADDYAKRLSIGYKEAEKVVGESLSCIAESKLETDCTNTTNKFQQCPLLNISYCPASEV 479

Query: 478  DLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNS 537
            DLS+GKSLVVVVYN LGWKRE++IR+PVINENV VKDS+G  IESQLLPLL  S+S+RN 
Sbjct: 480  DLSNGKSLVVVVYNSLGWKRENVIRVPVINENVNVKDSEGNEIESQLLPLLDASISVRNY 539

Query: 538  YSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISS----AKQAASHSGMRTVYKSQIRQ 593
            +S AYLG S NVTP YWLAFS SVPPLGF+TYII+S    AK+ A+ S  +TV+K++  Q
Sbjct: 540  HSMAYLGSSPNVTPKYWLAFSVSVPPLGFSTYIIASAPPTAKRTAAFSEAQTVHKTRATQ 599

Query: 594  NDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIF 653
              TIE+GPGNLKL+YSGK  K+ +YIN +TSV K +EQSY YY GDDGSKDLQ SGAYIF
Sbjct: 600  YGTIEIGPGNLKLIYSGKDGKIAQYINRRTSVKKSVEQSYSYYAGDDGSKDLQASGAYIF 659

Query: 654  RPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPID 713
            RPNGTYPI  +GQ++FT+LRGPLLDE+H RIN WIYQ+TRVYKGK+HAE+EFTVGPIPID
Sbjct: 660  RPNGTYPINSKGQVAFTVLRGPLLDEIHHRINSWIYQITRVYKGKEHAEVEFTVGPIPID 719

Query: 714  DGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGI 773
            DGIGKEVVT+IT+ + +NKTFYTDSSGRDF+ERIRDYRKDW+L+VNQP+AGNYYP+NLGI
Sbjct: 720  DGIGKEVVTKITTTLKNNKTFYTDSSGRDFLERIRDYRKDWDLQVNQPVAGNYYPINLGI 779

Query: 774  YMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGL 833
            YMKDNSSELSILVDRSVGGSSI DGQLELMLHRRLV DD+RGV EALNETVCV DKC GL
Sbjct: 780  YMKDNSSELSILVDRSVGGSSIVDGQLELMLHRRLVIDDSRGVGEALNETVCVLDKCTGL 839

Query: 834  TIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVL 893
            TI+GKYYLRIDP+ E AKWRRS+GQEIYSPFLLAF EQD + W  SH+ T+SAM ++YVL
Sbjct: 840  TIVGKYYLRIDPLSEGAKWRRSYGQEIYSPFLLAFAEQDRESWTKSHVTTFSAMGSSYVL 899

Query: 894  PDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSA 953
            PDNVA++TLQELD+GK L+R AHLYEI ED D+S+M+SVELKKVFP KKI+KVTE +L+A
Sbjct: 900  PDNVAILTLQELDNGKTLIRFAHLYEIGEDEDMSIMASVELKKVFPSKKINKVTETSLTA 959

Query: 954  NQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEF 1006
            NQERA M++KRLVW  EG S ++    RG+P+DP KLVVELAPMEIRTF+++F
Sbjct: 960  NQERAEMDRKRLVWNAEGFSGDENKVARGAPIDPVKLVVELAPMEIRTFLVDF 1012

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224122176|ref|XP_002318770.1| predicted protein [Populus trichocarpa] gi|222859443|gb|EEE96990.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359491464|ref|XP_002277164.2| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|356508869|ref|XP_003523176.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] Back     alignment and taxonomy information
>gi|225456481|ref|XP_002280858.1| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] gi|297734505|emb|CBI15752.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356516487|ref|XP_003526925.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|350538359|ref|NP_001234851.1| alpha-mannosidase precursor [Solanum lycopersicum] gi|301176645|gb|ADK66339.1| alpha-mannosidase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|315440801|gb|ADU20406.1| alpha-mannosidase [Capsicum annuum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1010
TAIR|locus:21591431024 AT5G13980 [Arabidopsis thalian 0.972 0.958 0.677 0.0
TAIR|locus:20908171019 AT3G26720 [Arabidopsis thalian 0.970 0.961 0.652 0.0
TAIR|locus:21568571047 AT5G66150 [Arabidopsis thalian 0.630 0.608 0.582 7.39999999766e-315
MGI|MGI:1072861013 Man2b1 "mannosidase 2, alpha B 0.482 0.480 0.442 4.3e-182
UNIPROTKB|G5E9281010 MAN2B1 "Mannosidase, alpha, cl 0.482 0.482 0.449 1e-180
UNIPROTKB|O007541011 MAN2B1 "Lysosomal alpha-mannos 0.482 0.481 0.450 2.1e-180
RGD|30391009 Man2b1 "mannosidase, alpha, cl 0.482 0.482 0.440 3.9e-179
UNIPROTKB|F1PKB21007 MAN2B1 "Uncharacterized protei 0.502 0.504 0.441 5e-179
DICTYBASE|DDB_G02922061010 manA "alpha-mannosidase" [Dict 0.932 0.932 0.401 4.6e-176
UNIPROTKB|F1MMX7999 MAN2B1 "Lysosomal alpha-mannos 0.489 0.494 0.450 3.2e-175
TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3592 (1269.5 bits), Expect = 0., P = 0.
 Identities = 673/993 (67%), Positives = 796/993 (80%)

Query:    19 ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLI 78
             ES+YM+YNTS  IVPGK+NVH+VPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDS++
Sbjct:    20 ESRYMVYNTSHTIVPGKLNVHVVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSIV 79

Query:    79 PALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHY 138
             PAL+ADKNRKFIYVEQAFFQRWW +QSEE++ +VK+L++SGQLELINGGMCMHDEAAPHY
Sbjct:    80 PALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIVKELIHSGQLELINGGMCMHDEAAPHY 139

Query:   139 IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDR 198
             IDMIDQTTLGHR+I  +FNVTPRIGWQIDPFGHSAVQAYLL AEVGFD +FF RIDYQDR
Sbjct:   140 IDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSVFFGRIDYQDR 199

Query:   199 AKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFD 258
              KR  EKTLEV+WR SKSLGSS+QI  G  P NYEPP   FY+E+ D SP+VQDD +LFD
Sbjct:   200 EKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTNYEPPPGGFYYEITDDSPVVQDDPDLFD 259

Query:   259 YNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVN 318
             YNV ERVN FV+AA+ QANITR NHIM+TMGTDF+YQYAHTW+RQMDK IHYVN DGRVN
Sbjct:   260 YNVQERVNAFVAAALDQANITRINHIMFTMGTDFRYQYAHTWYRQMDKLIHYVNLDGRVN 319

Query:   319 ALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYL 378
             A YSTPS+Y DAK+AANE+WPLKT+D+FPYADR NAYWTGYFTSRPALK YVR MSAYYL
Sbjct:   320 AFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGYFTSRPALKRYVRVMSAYYL 379

Query:   379 AARQLEFFKGRNEVGXXXXXXXXXXXXVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKV 438
             AARQLEFFKGR++ G             QHHDAVSGT KQHVA+DYAKRL+IGY EAE V
Sbjct:   380 AARQLEFFKGRSQKGPNTDSLADALAIAQHHDAVSGTSKQHVANDYAKRLAIGYVEAESV 439

Query:   439 VAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKRE 498
             VA SLA LT+      +NP   FQQC LLNISYCP SEV+LS GKSL+V+ YNPLGWKR 
Sbjct:   440 VATSLAHLTKVDPT--LNP--TFQQCLLLNISYCPSSEVNLSDGKSLIVLAYNPLGWKRV 495

Query:   499 DIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFS 558
             DI+R+PV+  +V+V DS+G  +ESQL+P   + ++LR  +  AYLG+S    P YWL FS
Sbjct:   496 DIVRLPVVGGDVSVHDSEGHEVESQLVPFTDEYVALRKYHVEAYLGQSPTQVPKYWLVFS 555

Query:   559 ASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRY 618
              +VPPLGF TY IS+AK+   +S    V      +   I +G G+LKL +S  +   + Y
Sbjct:   556 VTVPPLGFTTYTISTAKKTDGYSSKSYVSNILKGEQSIINIGHGHLKLSFSTDQGTAINY 615

Query:   619 INSKTSVNKLLEQSYIYYRGDDGSKDLQP-----SGAYIFRPNGTYPIEPEGQLSFTILR 673
             +N +TS+ + ++Q++ YY   +GS D +P     SGAY+FRPNGT+PI PEGQ+  T++ 
Sbjct:   616 VNGRTSMTEPVKQTFSYYSAYNGSNDKEPLIPQNSGAYVFRPNGTFPINPEGQVPLTVIH 675

Query:   674 GPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKT 733
             GPL+DEVHQ+INPWI Q+TRVYKGK+H E+EF VG IPIDDGIGKEVVTQI+S++ SNKT
Sbjct:   676 GPLVDEVHQQINPWISQITRVYKGKEHVEVEFIVGNIPIDDGIGKEVVTQISSSLKSNKT 735

Query:   734 FYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGS 793
             FYTDSSGRD+I+RIRDYR DW L+VNQPIAGNYYP+N GIY++D+  E S++VDR+ GGS
Sbjct:   736 FYTDSSGRDYIKRIRDYRSDWKLDVNQPIAGNYYPINHGIYLQDSKKEFSVMVDRAFGGS 795

Query:   794 SIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWR 853
             SI DGQ+ELMLHRRL+ DD+RGV+E LNETVCV DKC GLTI GKYY RIDP GE AKWR
Sbjct:   796 SIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQGKYYYRIDPYGEGAKWR 855

Query:   854 RSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGKILLR 913
             R+FGQEIYSP LLAF +QD     +   A++S +D +Y LPDNVAL+TLQELD G +LLR
Sbjct:   856 RTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNVALLTLQELDDGNVLLR 915

Query:   914 LAHLYEIEEDTDLSVMSSVELXXXXXXXXXXXVTEMNLSANQERAVMEKKRLVWRVEGSS 973
             LAHLYE+EED +LS ++SVEL           +TEM+LSANQER+ MEKKRLVW+VEG  
Sbjct:   916 LAHLYEVEEDKELSGVASVELKKLFPGKKIGKLTEMSLSANQERSTMEKKRLVWKVEGEG 975

Query:   974 K--EQPTAVRGSPVDPAKLVVELAPMEIRTFVI 1004
                E+  A RG  +DP KL +EL PMEIRT +I
Sbjct:   976 SYGEEKKAKRGREIDPRKLEMELYPMEIRTVLI 1008
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0015923 "mannosidase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292206 manA "alpha-mannosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O00754MA2B1_HUMAN3, ., 2, ., 1, ., 2, 40.40320.92270.9218yesno
Q8VHC8MA2B1_CAVPO3, ., 2, ., 1, ., 2, 40.40650.91280.9155yesno
P34098MANA_DICDI3, ., 2, ., 1, ., 2, 40.38940.94750.9475yesno
Q29451MA2B1_BOVIN3, ., 2, ., 1, ., 2, 40.39680.92670.9369yesno
O09159MA2B1_MOUSE3, ., 2, ., 1, ., 2, 40.39270.94850.9457yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1010
cd10810278 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic 1e-175
PLN027011050 PLN02701, PLN02701, alpha-mannosidase 1e-104
cd00451258 cd00451, GH38N_AMII_euk, N-terminal catalytic doma 1e-104
pfam01074269 pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam 1e-94
cd10809340 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal 3e-71
cd11666344 cd11666, GH38N_Man2A1, N-terminal catalytic domain 5e-58
cd10811326 cd10811, GH38N_AMII_Epman_like, N-terminal catalyt 1e-56
cd11667344 cd11667, GH38N_Man2A2, N-terminal catalytic domain 4e-55
cd10786251 cd10786, GH38N_AMII_like, N-terminal catalytic dom 1e-47
pfam07748379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 2e-42
pfam0926182 pfam09261, Alpha-mann_mid, Alpha mannosidase, midd 8e-23
smart0087279 smart00872, Alpha-mann_mid, Alpha mannosidase, mid 2e-22
cd10789252 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal 3e-10
cd10785203 cd10785, GH38-57_N_LamB_YdjC_SF, Catalytic domain 4e-05
cd10812258 cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly 1e-04
cd10791254 cd10791, GH38N_AMII_like_1, N-terminal catalytic d 4e-04
pfam07748379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 0.002
cd10793279 cd10793, GH57N_TLGT_like, N-terminal catalytic dom 0.002
cd10813252 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic d 0.004
>gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information 
 Score =  511 bits (1319), Expect = e-175
 Identities = 169/280 (60%), Positives = 204/280 (72%), Gaps = 4/280 (1%)

Query: 36  INVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQA 95
           +NVHLVPH+HDDVGWLKTVDQYY GSNNSIQ A VQ +LDS+I  L+ + +RKFIYVE A
Sbjct: 1   LNVHLVPHTHDDVGWLKTVDQYYYGSNNSIQHAGVQYILDSVIEELLKNPDRKFIYVEIA 60

Query: 96  FFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQ 155
           FF RWWR+QSE+ +  VK+LV +GQLE INGG CM+DEA  HY D+IDQ TLGH+++K+ 
Sbjct: 61  FFSRWWREQSEDTRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLGHQFLKDT 120

Query: 156 FNV--TPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRA 213
           F     PR+GWQIDPFGHS  QA L +   GFD LFF RIDYQD+A+R+  K +E +WR 
Sbjct: 121 FGECARPRVGWQIDPFGHSRTQASLFAQM-GFDGLFFGRIDYQDKAQRLKNKEMEFIWRG 179

Query: 214 SKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAI 273
           S SLG  A I TG+   +Y PP   F F++      +QDD NL DYNV ERV+DFV  A 
Sbjct: 180 SPSLGPDADIFTGVLYNHYGPP-PGFCFDILCGDEPIQDDPNLEDYNVDERVDDFVQYAK 238

Query: 274 AQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ 313
            QA   RTNHIM TMG+DF+YQ A  WF+ MDK I YVN+
Sbjct: 239 EQAQHYRTNHIMLTMGSDFQYQNAEMWFKNMDKLIKYVNK 278

The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information
>gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain Back     alignment and domain information
>gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information
>gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212097 cd10785, GH38-57_N_LamB_YdjC_SF, Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins Back     alignment and domain information
>gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212103 cd10791, GH38N_AMII_like_1, N-terminal catalytic domain of mainly uncharacterized eukaryotic proteins similar to alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information
>gnl|CDD|212105 cd10793, GH57N_TLGT_like, N-terminal catalytic domain of 4-alpha-glucanotransferase; glycoside hydrolase family 57 (GH57) Back     alignment and domain information
>gnl|CDD|212124 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1010
KOG1959996 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PLN027011050 alpha-mannosidase 100.0
KOG19581129 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PRK09819875 alpha-mannosidase; Provisional 100.0
KOG43421078 consensus Alpha-mannosidase [Carbohydrate transpor 100.0
PF01074275 Glyco_hydro_38: Glycosyl hydrolases family 38 N-te 100.0
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 100.0
PF07748457 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t 100.0
PF0926180 Alpha-mann_mid: Alpha mannosidase, middle domain; 99.83
smart0087279 Alpha-mann_mid Alpha mannosidase, middle domain. M 99.8
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 99.77
PF03065360 Glyco_hydro_57: Glycosyl hydrolase family 57; Inte 98.42
COG1543504 Uncharacterized conserved protein [Function unknow 96.23
PF01522123 Polysacc_deac_1: Polysaccharide deacetylase; Inter 95.4
COG1449615 Alpha-amylase/alpha-mannosidase [Carbohydrate tran 94.78
TIGR03212297 uraD_N-term-dom putative urate catabolism protein. 92.52
TIGR02884224 spore_pdaA delta-lactam-biosynthetic de-N-acetylas 92.46
TIGR02764191 spore_ybaN_pdaB polysaccharide deacetylase family 92.19
TIGR03006265 pepcterm_polyde polysaccharide deactylase family p 90.76
TIGR02873268 spore_ylxY probable sporulation protein, polysacch 89.52
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 83.93
PRK14581672 hmsF outer membrane N-deacetylase; Provisional 80.76
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.5e-229  Score=1915.13  Aligned_cols=961  Identities=51%  Similarity=0.845  Sum_probs=870.4

Q ss_pred             cceeeecCCCCCCCCceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHH
Q 001813           20 SKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQR   99 (1010)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~   99 (1010)
                      ..++.|++|+...+++++||||||||+|+|||||+||||+|++|.||++.|++|||+||++|.+||+|||+++|++||.+
T Consensus        21 ~~~~~y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSVV~eLl~dp~RRFI~VE~aFF~r  100 (996)
T KOG1959|consen   21 ESRAGYNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSVVEELLKDPNRRFIYVETAFFAR  100 (996)
T ss_pred             hHhhccCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHHHHHHhcCCccceehhhHHHHHH
Confidence            45556999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcC--CCCceeeecCCCCCchhhHH
Q 001813          100 WWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFN--VTPRIGWQIDPFGHSAVQAY  177 (1010)
Q Consensus       100 w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG--~~p~v~w~~D~FGhs~~~p~  177 (1010)
                      ||.+|++++|+.||+||++|||||+||||||+|||.+||.++|+||+.||+||.++||  .+|++||||||||||+.+|+
T Consensus       101 WW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAs  180 (996)
T KOG1959|consen  101 WWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQAS  180 (996)
T ss_pred             HHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999  79999999999999999999


Q ss_pred             HHHhhcCCcEEEEeecCHHhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCcccc
Q 001813          178 LLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLF  257 (1010)
Q Consensus       178 ll~~~~G~~~~~~~R~~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~  257 (1010)
                      || ++|||++.+|+||||++|+.|..++.|||+|+|++++|+.++|||++|+.||++| +|||||.+|.+.|++|++.+.
T Consensus       181 lf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P-~gfc~dv~c~d~Pi~D~~~~~  258 (996)
T KOG1959|consen  181 LF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP-PGFCFDVLCGDDPIIDGPRSY  258 (996)
T ss_pred             HH-HHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC-CCceeccccCCCCCCCCCCCC
Confidence            99 9999999999999999999999999999999999999999999999999999999 999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhcC---C-CeeEEEcChhhhHHHHHh
Q 001813          258 DYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD---G-RVNALYSTPSMYIDAKYA  333 (1010)
Q Consensus       258 ~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~~---~-~~~i~~sT~~~Yf~al~~  333 (1010)
                      +|||++|++.|++.++.++..|+|||||+|||+||+|.+|..||+||||||+|+|+.   + .+++.||||+||++++++
T Consensus       259 d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~  338 (996)
T KOG1959|consen  259 DYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHA  338 (996)
T ss_pred             CccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999943   4 799999999999999999


Q ss_pred             cCCCCCCccCCCccccccCCCceeeeecccchhhHHHHHhhHHHHHHHHhhhhccccc--CCCchHHHHHHHHhhhcccc
Q 001813          334 ANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNE--VGLSTDSLADALALVQHHDA  411 (1010)
Q Consensus       334 ~~~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~~--~~~~~~~~w~~l~~~QhHDa  411 (1010)
                      .+..||+++.|||||++++|.||||||||||.+|++.|.++++|++|++|+++|++..  ..+.++.|+++|++.|||||
T Consensus       339 ~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDA  418 (996)
T KOG1959|consen  339 ANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDA  418 (996)
T ss_pred             hcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhccc
Confidence            9999999999999999999999999999999999999999999999999999998654  56789999999999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCcCcccccccccccCCCCccccCCCCceEEEEEc
Q 001813          412 VSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYN  491 (1010)
Q Consensus       412 ItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~l~~~~~~~v~vfN  491 (1010)
                      ||||+|++|.+||.++|..|+..|++++..+|+.|....       ..+|++|.+||+|+||.+++   .++.+.|+|||
T Consensus       419 VTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~-------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YN  488 (996)
T KOG1959|consen  419 VTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP-------NGEFQSCLLLNISECAFTKD---GADNFIVTLYN  488 (996)
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------CccchhhhhhccccCCCCcC---CcCcEEEEEEc
Confidence            999999999999999999999999999999999998743       34799999999999999863   36789999999


Q ss_pred             CCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEE
Q 001813          492 PLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYII  571 (1010)
Q Consensus       492 pl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~~~v  571 (1010)
                      ||+|.++++|+|||+.+++.|+|+.|++|++|++|.......+..          ......++|+|.|.|||+|+++|.|
T Consensus       489 pLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~----------~~~~~~~eLvf~asvpplg~aty~i  558 (996)
T KOG1959|consen  489 PLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALES----------RNNDTKHELVFKASVPPLGIATYFI  558 (996)
T ss_pred             CCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhc----------cccCCCceEEEEEEecCccceEEEE
Confidence            999999999999999999999999999999999998754332211          1234578999999999999999999


Q ss_pred             EeCCcccCccccceeeeccccCCCceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcce
Q 001813          572 SSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAY  651 (1010)
Q Consensus       572 ~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY  651 (1010)
                      ++.......+ .+..............|+|+++++.||..+|.++++....+|.+..+.|.|.+|.+..|+++.+.||||
T Consensus       559 ~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAY  637 (996)
T KOG1959|consen  559 KKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAY  637 (996)
T ss_pred             eecCcccccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcce
Confidence            9655432210 011111111223348999999999999888999999988899999999999999998887567999999


Q ss_pred             eEeCCCCCccCC-CCCceEEEEeCCceEEEEEEEcCeEEEEEEEEcCCCceEEEEEECcccccCCCCcEEEEEEEeeccC
Q 001813          652 IFRPNGTYPIEP-EGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMIS  730 (1010)
Q Consensus       652 ~F~P~~~~~~~~-~~~~~i~v~~Gpl~~~v~~~~~~~i~~~irLy~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~t~i~s  730 (1010)
                      +|+| +...+++ +....++|+.|||+.||++.++.|++|.+|+|+|.+++||||.|+|||++++.|||++.||+|+|.|
T Consensus       638 iFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S  716 (996)
T KOG1959|consen  638 IFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISS  716 (996)
T ss_pred             EecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceEEEEecccccc
Confidence            9999 5443443 3346889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEcCCcccceecccccccCcccccccccccceEeccceeeEEecCcceEEEeeccccccccCCCeEEEEEEeeecc
Q 001813          731 NKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVA  810 (1010)
Q Consensus       731 ~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~i~i~D~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~  810 (1010)
                      ++.|||||||++|+||.+++|++|....++|++||||||++.|||+|++.+|+|||||+|||+|++||+||||||||+++
T Consensus       717 ~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~  796 (996)
T KOG1959|consen  717 NGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLN  796 (996)
T ss_pred             CceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccCccccccccccccccccCeEEeeEEEEEecCccchh-hhcccchhhhccCceeeecccCCCccccccccccccCcc
Q 001813          811 DDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDT  889 (1010)
Q Consensus       811 DD~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~~-~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~  889 (1010)
                      ||+|||||+|||+.++.   .||+++|+|++.|++..+++ ..+|...+++..|.+.+|++.....+........+.+..
T Consensus       797 DD~~Gv~EaLnEt~~~~---~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~  873 (996)
T KOG1959|consen  797 DDGRGVGEALNETVYGH---AGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSG  873 (996)
T ss_pred             ccccccchhcccccccc---cceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCcccccc
Confidence            99999999999999862   79999999999999888765 677888999999999999987654443322222222222


Q ss_pred             ccCCCCcceEEEeeecCCCcEEEEEeccccccccCCCcceeeeeccccCCcCccceEEeccccccchhhHhhhcceeeee
Q 001813          890 TYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRV  969 (1010)
Q Consensus       890 ~~~lp~~vhlltl~~~~~~~illRl~~l~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~etsLt~~~~~~~~~~~~~~w~~  969 (1010)
                      +..||.+||||||++|+++.+||||+|+|+++||+.+|++++|||.+||..+++..|+||||+||+++++|  +|++|..
T Consensus       874 ~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~m--kr~k~~~  951 (996)
T KOG1959|consen  874 SYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDM--KRFKFHW  951 (996)
T ss_pred             ccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhhh--hhhcccc
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999  5555544


Q ss_pred             c--CCC--CCCCcccCCCCCCC-CCceEEecCcceEEEEEEEeec
Q 001813          970 E--GSS--KEQPTAVRGSPVDP-AKLVVELAPMEIRTFVIEFYSE 1009 (1010)
Q Consensus       970 ~--~~~--~~~~~~~~~~~~~~-~~~~v~l~PmeIrTf~i~~~~~ 1009 (1010)
                      .  +..  .....+.+..|+++ +.+.|+|.|||||||+|+.+++
T Consensus       952 ~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~~  996 (996)
T KOG1959|consen  952 DVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQK  996 (996)
T ss_pred             CCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEEecC
Confidence            3  311  11123445556654 6789999999999999998763

>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold Back     alignment and domain information
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1543 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase Back     alignment and domain information
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03212 uraD_N-term-dom putative urate catabolism protein Back     alignment and domain information
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase Back     alignment and domain information
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB Back     alignment and domain information
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily Back     alignment and domain information
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PRK14581 hmsF outer membrane N-deacetylase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1010
1ps3_A1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 2e-78
3dx3_A1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 2e-78
1qwn_A1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 2e-78
1hxk_A1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 3e-78
1qwu_A1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 8e-78
1o7d_A298 The Structure Of The Bovine Lysosomal A-Mannosidase 2e-77
3cv5_A1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 2e-77
1hty_A1015 Golgi Alpha-Mannosidase Ii Length = 1015 1e-74
1o7d_D282 The Structure Of The Bovine Lysosomal A-Mannosidase 5e-51
1o7d_C159 The Structure Of The Bovine Lysosomal A-Mannosidase 3e-19
1o7d_B84 The Structure Of The Bovine Lysosomal A-Mannosidase 5e-14
1o7d_E126 The Structure Of The Bovine Lysosomal A-Mannosidase 1e-06
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure 
Iteration: 1

 Score =  291 bits (744), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 240/845 (28%), Positives = 392/845 (46%), Gaps = 101/845 (11%)
Query: 35  KINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQ 94
           K+ V +VPHSH+D GW++T ++YY      I    ++++ D        +   KFI+ E 
Sbjct: 80  KLKVFVVPHSHNDPGWIQTFEEYYQHDTKHILSNALRHLHD--------NPEMKFIWAEI 131
Query: 95  AFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKE 154
           ++F R++ D  E  +  +K +V +GQLE + GG  M DEA  H+ +++ Q T G  ++K+
Sbjct: 132 SYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQ 191
Query: 155 QFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRAS 214
             NVTP   W IDPFGHS    Y+L  + GF  +   R  Y  + +   ++ LE +WR  
Sbjct: 192 FMNVTPTASWAIDPFGHSPTMPYILQ-KSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQI 250
Query: 215 KSLGSSAQIMTGISP-KNYEPPSD---------NFYFE----VGDTSPIVQDDMNLFDYN 260
                   + T + P  +Y+ P            F F+     G + P       + D N
Sbjct: 251 WDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQN 310
Query: 261 VPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQM---DKFIHYVNQDGRV 317
           V  R +  V     +A + RTN ++  +G DF+++    W  Q    ++   ++N     
Sbjct: 311 VAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHF 370
Query: 318 N--ALYSTPSMYIDAKYAANES----WPLKTDDFFPYADRENAYWTGYFTSRPALKGYVR 371
           N  A + T   Y DA + A  +    +P  + DFF YADR + YW+GY+TSRP  K   R
Sbjct: 371 NVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDR 430
Query: 372 TMSAYYLAARQLEFFK---GRNEVGXXXXXXXXXXXXVQHHDAVSGTEKQHVADDYAKRL 428
            +  Y  AA  L  +    G   +              QHHD ++GT K HV  DY +R+
Sbjct: 431 VLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRM 490
Query: 429 SIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSS-----GK 483
                  + V+  S+  L   +K    +P  +F     L+ S  P S V+ S      G+
Sbjct: 491 QEALKACQMVMQQSVYRL--LTKPSIYSPDFSFSYF-TLDDSRWPGSGVEDSRTTIILGE 547
Query: 484 SLV----VVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYS 539
            ++    VV++N L   RE ++   V +  V+V D     +E+Q+ P+         S+ 
Sbjct: 548 DILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVW--------SWH 599
Query: 540 TAYLGKSTN---VTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQ--IRQN 594
              L K+ +    T  Y + F A VPP+G  TY+++ +     H    T Y S   +R+N
Sbjct: 600 HDTLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEH----TSYASNLLLRKN 655
Query: 595 DT------------------IEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYY 636
            T                  I +  GN   L   ++  L     ++ S +  +   ++ Y
Sbjct: 656 PTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPHVPVHFKFLKY 715
Query: 637 RGDDGSKDLQPSGAYIFRPNG-TYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVY 695
            G     D   SGAY+F PNG   P+E  GQ    + +G L   V   +   ++Q   + 
Sbjct: 716 -GVRSHGDR--SGAYLFLPNGPASPVE-LGQPVVLVTKGKLESSVSVGLPSVVHQT--IM 769
Query: 696 KGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWN 755
           +G    EI   V    +D+    E+V ++ +++ S   FYTD +G  FI+R R  +    
Sbjct: 770 RGGA-PEIRNLVDIGSLDN---TEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDK---- 821
Query: 756 LEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRG 815
                P+  NYYP+  G++++D ++ L++L  + +GGSS+A G+LE+M  RRL +DD RG
Sbjct: 822 ----LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERG 877
Query: 816 VSEAL 820
           + + +
Sbjct: 878 LGQGV 882
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 Back     alignment and structure
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure
>pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 Back     alignment and structure
>pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 Back     alignment and structure
>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 Back     alignment and structure
>pdb|1O7D|E Chain E, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 126 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1010
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 0.0
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-115
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 1e-101
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 5e-97
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 1e-96
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-45
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 3e-35
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 4e-34
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1k1x_A659 4-alpha-glucanotransferase; 2.40A {Thermococcus li 7e-06
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure
 Score =  762 bits (1968), Expect = 0.0
 Identities = 247/1055 (23%), Positives = 429/1055 (40%), Gaps = 138/1055 (13%)

Query: 19   ESKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLI 78
            +   + Y+        K+ V +VPHSH+D GW++T ++YY            +++L + +
Sbjct: 64   QGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQH--------DTKHILSNAL 115

Query: 79   PALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHY 138
              L  +   KFI+ E ++F R++ D  E  +  +K +V +GQLE + GG  M DEA  H+
Sbjct: 116  RHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHW 175

Query: 139  IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDR 198
             +++ Q T G  ++K+  NVTP   W I PFGHS    Y+L  + GF  +   R  Y  +
Sbjct: 176  RNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVK 234

Query: 199  AKRINEKTLEVVWRASKSLGSSAQIMTGISPKN-YEPPS---------DNFYFE----VG 244
             +   ++ LE +WR          + T + P   Y+ P            F F+     G
Sbjct: 235  KELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFG 294

Query: 245  DTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQ- 303
             + P       + D NV  R +  V     +A + RTN ++  +G DF+++    W  Q 
Sbjct: 295  LSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQR 354

Query: 304  --MDKFIHYVNQDGR--VNALYSTPSMYIDA----KYAANESWPLKTDDFFPYADRENAY 355
               ++   ++N      V A + T   Y DA    + A    +P  + DFF YADR + Y
Sbjct: 355  VNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNY 414

Query: 356  WTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADA---LALVQHHDAV 412
            W+GY+TSRP  K   R +  Y  AA  L  +   + +    + L  A   L+L QHHD +
Sbjct: 415  WSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGI 474

Query: 413  SGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYC 472
            +GT K HV  DY +R+       + V+  S+  L   +K    +P  +F     L+ S  
Sbjct: 475  TGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLL--TKPSIYSPDFSFSYF-TLDDSRW 531

Query: 473  PPSEVDLS---------SGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQ 523
            P S V+ S            S  VV++N L   RE ++   V +  V+V D     +E+Q
Sbjct: 532  PGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQ 591

Query: 524  LLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGM 583
            + P+                      T  Y + F A VPP+G  TY+++ +     H+  
Sbjct: 592  VSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSY 646

Query: 584  RTVYKSQIRQN----------------DTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNK 627
             +    +                      I +  GN   L   ++  L     ++ S + 
Sbjct: 647  ASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPHV 706

Query: 628  LLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRINPW 687
             +   ++ Y           SGAY+F PNG       GQ    + +G L   V   +   
Sbjct: 707  PVHFKFLKYGVRSHG---DRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPSV 763

Query: 688  IYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERI 747
            ++Q      G         +G +        E+V ++ +++ S   FYTD +G  FI+R 
Sbjct: 764  VHQTIM-RGGAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYTDLNGLQFIKRR 817

Query: 748  RDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRR 807
            R  +         P+  NYYP+  G++++D ++ L++L  + +GGSS+A G+LE+M  RR
Sbjct: 818  RLDK--------LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRR 869

Query: 808  LVADDNRGVSEALNETV-------CVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEI 860
            L +DD RG+ + + +          V +K        K    + P G          Q +
Sbjct: 870  LASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSK----LHPAGYLTSAAHKASQSL 925

Query: 861  YSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK-------ILLR 913
              P       +  + W  +    +     +    +++ +  ++ L            +L 
Sbjct: 926  LDPLDKFIFAE--NEWIGAQ-GQFGGDHPS--AREDLDVSVMRRLTKSSAKTQRVGYVLH 980

Query: 914  LAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSS 973
              +L +     + +    +++  + P   +++     L+  Q    ++            
Sbjct: 981  RTNLMQCGTPEEHTQK--LDVCHLLP--NVARCERTTLTFLQNLEHLDG----------- 1025

Query: 974  KEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYS 1008
                            +  E+ PME   +V    S
Sbjct: 1026 ---------------MVAPEVCPMETAAYVSSHSS 1045
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 Back     alignment and structure
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Length = 659 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1010
g1o7d.2490 b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma 1e-141
d3bvua2522 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { 1e-124
g1o7d.3330 c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno 1e-113
d3bvua3381 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru 1e-105
d1k1xa3310 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te 1e-43
d3bvua1111 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr 2e-26
g1o7d.195 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann 6e-25
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 Back     information, alignment and structure
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1010
g1o7d.2490 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua2522 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
d3bvua3381 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.3330 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d1k1xa3310 4-alpha-glucanotransferase, N-terminal domain {Arc 100.0
d3bvua1111 Golgi alpha-mannosidase II {Fruit fly (Drosophila 99.94
g1o7d.195 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 99.93
d2b5dx2404 Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 99.0
d1ufaa2412 Hypothetical protein TT1467, N-terminal domain {Th 98.6
d2j13a1235 Putative polysaccharide deacetylase BA0424 {Bacill 94.53
d2c1ia1196 Peptidoglycan GlcNAc deacetylase C-terminal domain 93.62
d1ny1a_235 Probable polysaccharide deacetylase PdaA {Bacillus 93.35
d1z7aa1301 Hypothetical protein PA1517 {Pseudomonas aeruginos 93.03
d2cc0a1192 Acetyl-xylan esterase {Streptomyces lividans [TaxI 89.75
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure