Citrus Sinensis ID: 001895
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 999 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SHS7 | 1006 | Serine/threonine-protein | yes | no | 0.987 | 0.981 | 0.901 | 0.0 | |
| Q9SJF0 | 1018 | Serine/threonine-protein | no | no | 0.991 | 0.973 | 0.880 | 0.0 | |
| Q2QM47 | 1009 | Serine/threonine-protein | yes | no | 0.992 | 0.983 | 0.851 | 0.0 | |
| Q60EX6 | 883 | Serine/threonine-protein | no | no | 0.860 | 0.973 | 0.633 | 0.0 | |
| Q8L7U5 | 881 | Serine/threonine-protein | no | no | 0.861 | 0.977 | 0.613 | 0.0 | |
| Q9LR78 | 793 | Serine/threonine-protein | no | no | 0.786 | 0.991 | 0.453 | 0.0 | |
| P48482 | 312 | Serine/threonine-protein | no | no | 0.288 | 0.923 | 0.488 | 6e-74 | |
| P48484 | 321 | Serine/threonine-protein | no | no | 0.293 | 0.912 | 0.472 | 3e-73 | |
| P22198 | 316 | Serine/threonine-protein | N/A | no | 0.287 | 0.908 | 0.481 | 4e-73 | |
| O82734 | 324 | Serine/threonine-protein | no | no | 0.292 | 0.901 | 0.472 | 8e-73 |
| >sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1758 bits (4553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1001 (90%), Positives = 940/1001 (93%), Gaps = 14/1001 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTS-----EESMEREQLADTEQPSGSPASTTSQSQQQPQQ 55
MD+DS+MVPE D DP EN S EE+ E++ +++E S +P+ QQQ
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPMEEKEEASEQQTGSESESASLTPSLPPPSQQQQ--- 57
Query: 56 HQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPR 115
QQQQ Q T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPR
Sbjct: 58 QQQQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPR 117
Query: 116 LILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPR 175
LILFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKWSR+TP+GEPP+PR
Sbjct: 118 LILFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPR 177
Query: 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235
AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL
Sbjct: 178 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 237
Query: 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295
VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL
Sbjct: 238 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 297
Query: 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG 355
LCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGG
Sbjct: 298 LCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGG 357
Query: 356 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVG 415
GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVG
Sbjct: 358 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVG 417
Query: 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDER 474
DLIFIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DER
Sbjct: 418 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDER 477
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
T + +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KGVE LV+ASAAEA
Sbjct: 478 TGE-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEA 535
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHH
Sbjct: 536 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHH 595
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV
Sbjct: 596 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 655
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFG
Sbjct: 656 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFG 715
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGN
Sbjct: 716 DLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGN 775
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 776 HEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 835
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 836 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 895
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 896 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 955
Query: 952 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
HPLPPAI+SPETSPERHIEDTWMQELN NRPPTPTRGRPQN
Sbjct: 956 HPLPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQN 996
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6 |
| >sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana GN=BSL2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1752 bits (4537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1008 (88%), Positives = 929/1008 (92%), Gaps = 17/1008 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--SGS------PASTTS 47
MD DS+MV + D D + + S MERE Q+ D P GS +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q2QM47|BSL2_ORYSJ Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1659 bits (4296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 856/1005 (85%), Positives = 902/1005 (89%), Gaps = 13/1005 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS M E+D D + E + + G+P + + P
Sbjct: 1 MDVDSRMTTESDSDSDAAAQGGGGGGFGSETSSASPSAPGTPTAMGAGGGAAPIAAAAIA 60
Query: 61 TQQTPVVGP--RCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 118
+ V R AP Y+VVNA +EKKEDGPG RCGHTLTAV AVGEEG PGY+GPRLIL
Sbjct: 61 AAASAAVVAGPRPAPGYTVVNAAMEKKEDGPGCRCGHTLTAVPAVGEEGAPGYVGPRLIL 120
Query: 119 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAH 178
FGGATALEGNSA PSSAGSAGIRLAGATADVHCYDV +NKWSR+TP GEPP+PRAAH
Sbjct: 121 FGGATALEGNSATP--PSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEPPSPRAAH 178
Query: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ
Sbjct: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
Query: 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
R+L+ IGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG
Sbjct: 239 RFLLTIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
Query: 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
GRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM
Sbjct: 299 GRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
Query: 359 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
VEDSSSVAVLDTAAGVWCDTKSVVT+PRTGRYSADAAGGDA+VELTRRCRHAAAAVGD+I
Sbjct: 359 VEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDMI 418
Query: 419 FIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQ 477
++YGGLRGGVLLDDLLVAEDLAAAETT AA+ AAA AAAS++Q+ R PGRY + DE+T Q
Sbjct: 419 YVYGGLRGGVLLDDLLVAEDLAAAETTNAANQAAAIAAASDIQAGREPGRYAYNDEQTGQ 478
Query: 478 TIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAI 537
+PDG+VVLG PVA P+NGDMYTDIS ENA++QG RR++KGV+ LV+ASAAEAEAI
Sbjct: 479 PATITSPDGAVVLGTPVAAPVNGDMYTDISPENAVIQGQRRMSKGVDYLVEASAAEAEAI 538
Query: 538 SATLAAVKARQVNGEVE-LPDRDRGAEATPSGKQ---MIKPDSAGSN-SIAPAGVRLHHR 592
SATLAAVKARQVNGE E PDR++ +ATPS KQ +IKPD A SN S P GVRLHHR
Sbjct: 539 SATLAAVKARQVNGEAEHSPDREQSPDATPSVKQNASLIKPDYALSNNSTPPPGVRLHHR 598
Query: 593 AVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVI 652
AVVVAAETGGALGGMVRQLSIDQFENEGRRV YGTPESATAARKLLDRQMSINSVPKKVI
Sbjct: 599 AVVVAAETGGALGGMVRQLSIDQFENEGRRVIYGTPESATAARKLLDRQMSINSVPKKVI 658
Query: 653 AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 712
A LLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD
Sbjct: 659 ASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 718
Query: 713 LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772
LMRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP NVHLIRGNH
Sbjct: 719 LMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNH 778
Query: 773 EAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSIN 832
EAADINALFGFRIECIERMGERDGIW WHR+NRLFNWLPLAALIEKKIICMHGGIGRSIN
Sbjct: 779 EAADINALFGFRIECIERMGERDGIWTWHRMNRLFNWLPLAALIEKKIICMHGGIGRSIN 838
Query: 833 HVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 892
HVEQIENLQRPITMEAGS+VLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN
Sbjct: 839 HVEQIENLQRPITMEAGSVVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 898
Query: 893 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 952
NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH
Sbjct: 899 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 958
Query: 953 PLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ---NDR 994
PLPPAI+SPETSPE H+EDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 959 PLPPAITSPETSPEHHLEDTWMQELNANRPPTPTRGRPQAANNDR 1003
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/922 (63%), Positives = 674/922 (73%), Gaps = 62/922 (6%)
Query: 72 APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAA 131
AP Y V +D PG RCGH+LT VA T G+ GPRLILFGGATA+E A+
Sbjct: 13 APAYREVEGWEGAGDDSPGFRCGHSLTVVAP-----TKGH-GPRLILFGGATAIEAG-AS 65
Query: 132 SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQG 191
SG P GIRLAG T VH YDV T +W+R+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 66 SGMP------GIRLAGVTNSVHSYDVDTRRWTRLHPAGEPPSPRAAHAAAAVGTMVVFQG 119
Query: 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGH M LV QRYL+ + GNDGKR
Sbjct: 120 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGAGPGPRYGHCMDLVAQRYLVTVSGNDGKR 179
Query: 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311
L+D WALDTA KPY W+KL P+G+ P MYATASAR+DG+LLLCGGRDAS +PL+ AY
Sbjct: 180 VLSDAWALDTAQKPYRWQKLNPDGDRPSARMYATASARTDGMLLLCGGRDASGMPLSDAY 239
Query: 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
GL H G+WEW +APGVSPSPRYQHAAVFV ARLHV+GG L GGR +E ++AVLDTA
Sbjct: 240 GLLMHTSGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAIEGEGAIAVLDTA 299
Query: 372 AGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
AGVW D +VTS RT + S D DA+ +L RRCRHAAA+VG I+IYGGLRG +LLD
Sbjct: 300 AGVWLDRNGIVTS-RTLKSSHDH---DASSDLLRRCRHAAASVGTQIYIYGGLRGDILLD 355
Query: 432 DLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTIPEAAPDGSVVLG 491
D LVA++ A S S + R + + R
Sbjct: 356 DFLVADN---------------APIQSEFTSSMYDRVPRAENQNR--------------- 385
Query: 492 NPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISATL-AAVKARQVN 550
N + +D T N K ++ L QASAAEAEA+SA AA +A +
Sbjct: 386 -------NHNFNSDSPTTNNSTD-----KKSIDMLTQASAAEAEAVSAVWRAAQEASHAS 433
Query: 551 GEVELPDRDRGAEATPSGKQMIKPDSAGSNSIAPAGVRLHHRAVVVAAETGGALGGMVRQ 610
E L + G+E+ S + D S+ P V+LH RAVVV+ E G LG +VRQ
Sbjct: 434 SEDSLSE-GIGSESPLSETSPMPEDLDDGGSLEP-DVKLHSRAVVVSKEAVGDLGCLVRQ 491
Query: 611 LSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFF 670
LS+DQFENE RR+ + + + A+K L+RQ S + KKVI+ LLKPR W+ P R FF
Sbjct: 492 LSLDQFENESRRMHPSSNDQSYPAKKALNRQRSPQGLHKKVISFLLKPRNWRAPAERAFF 551
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIA 730
LD E+ +LC +AE+IF EP+VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 552 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDIT 611
Query: 731 YIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIER 790
YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIER
Sbjct: 612 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 671
Query: 791 MGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850
MGE DGIWAW R N+LFN+LPLAA+IEKKIICMHGGIGRSIN +EQIE L+RPITM+ GS
Sbjct: 672 MGESDGIWAWTRFNQLFNYLPLAAMIEKKIICMHGGIGRSINTIEQIEKLERPITMDVGS 731
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
I+LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDGF
Sbjct: 732 IILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKRNRLQLIIRAHECVMDGF 791
Query: 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIE 970
ERFA G LITLFSATNYCGTANNAGAILV+GR LV+VPKLIHPLPP ++SPE+SPER ++
Sbjct: 792 ERFAHGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPVNSPESSPERAMD 851
Query: 971 DTWMQELNANRPPTPTRGRPQN 992
TWMQELN RPPTPTRGRPQ+
Sbjct: 852 ATWMQELNIQRPPTPTRGRPQS 873
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/924 (61%), Positives = 653/924 (70%), Gaps = 63/924 (6%)
Query: 72 APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAA 131
AP Y + + ++D PGPRC HTLTAVAA G PRLILFGGATA+EG S++
Sbjct: 10 APQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHG------PRLILFGGATAIEGGSSS 63
Query: 132 SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQG 191
GIRLAG T VH YD+LT KW+R+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 64 V--------PGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQG 115
Query: 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251
GIGPAG S +DL+VLD+T + +WHRVVVQG GPGPRYGHVM LV QRYL+ + GNDGKR
Sbjct: 116 GIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKR 175
Query: 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311
L+D WALDTA KPY W++L P+G+ P MYA+ SARSDG+ LLCGGRD PL AY
Sbjct: 176 ALSDAWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAY 235
Query: 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
GL HR+G+WEW +APGV+PSPRYQHAAVFV ARLHVSGG L GGR+++ +SVAVLDTA
Sbjct: 236 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTA 295
Query: 372 AGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
AGVW D VTS R + D D + EL RRCRH AA+VG I+++GGLRG VLLD
Sbjct: 296 AGVWLDRNGQVTSARGSKGQIDQ---DPSFELMRRCRHGAASVGIRIYVHGGLRGDVLLD 352
Query: 432 DLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTIPEAAPDGSVVLG 491
D LVAE+ + S++ S L +RT+Q+ + P S
Sbjct: 353 DFLVAEN---------------STFQSDISSPL-----LASDRTQQS---STPRFSYAAR 389
Query: 492 NPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISATLAAVKARQVNG 551
P + M +S + L+ + + + A+ + TL
Sbjct: 390 PPSGSEPSFSMSEGLSLDENSLEKLTEASAAEAEVASSVWRAAQLGAGTL---------- 439
Query: 552 EVELPDRDRGAEATPSGKQMIKP--DSAGSNSIAPAGVRLHHRAVVVAAETGGALGGMVR 609
+ PS P +S + VRLH RAVVVA ET G+LGGMVR
Sbjct: 440 -----------DEEPSTSDASSPIVESTTDGTANEGDVRLHPRAVVVAKETVGSLGGMVR 488
Query: 610 QLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQF 669
QLS+DQF+NE RR+ K RQ S + KKVIA LL+PR WKPP R+F
Sbjct: 489 QLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHKKVIAALLRPRNWKPPGNRKF 548
Query: 670 FLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI 729
FLD E+ +LC +AE+IF E +VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 549 FLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDI 608
Query: 730 AYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIE 789
YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIE
Sbjct: 609 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIE 668
Query: 790 RMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAG 849
RMGE DGIWAW R N+LFN+LPLAALIE KIICMHGGIGRSI+ VEQIE ++RPITM+AG
Sbjct: 669 RMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGRSISTVEQIEKIERPITMDAG 728
Query: 850 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDG 909
S+VLMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDG
Sbjct: 729 SLVLMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDG 788
Query: 910 FERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHI 969
FERFAQG LITLFSATNYCGTANNAGAILV+GR LV+VPKLIHPLPP I SPE SPE
Sbjct: 789 FERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPILSPENSPEHSG 848
Query: 970 EDTWMQELNANRPPTPTRGRPQND 993
+D WMQELN RPPTPTRGRPQ D
Sbjct: 849 DDAWMQELNIQRPPTPTRGRPQPD 872
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/930 (45%), Positives = 539/930 (57%), Gaps = 144/930 (15%)
Query: 60 QTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILF 119
Q+ Q P +P+Y + + ED PGPRCGHTLTAV +LILF
Sbjct: 5 QSYQYP------SPSYESIQTFYDTDEDWPGPRCGHTLTAVFVNNSH--------QLILF 50
Query: 120 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHV 179
GG+T N +S P I L G T VH +DVLT KW+R+ P G+ P+PRA H
Sbjct: 51 GGSTTAVANHNSS-LPE------ISLDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHA 103
Query: 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
A GT+++IQGGIGP+G S D+++LD+T + W + +V G P PRYGHVM + QR
Sbjct: 104 AALYGTLILIQGGIGPSGPSDGDVYMLDMTNNK--WIKFLVGGETPSPRYGHVMDIAAQR 161
Query: 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299
+L+ GN+G L D WALDT P+ W +L P G P MYA+ S+R DG+ LLCGG
Sbjct: 162 WLVIFSGNNGNEILDDTWALDTRG-PFSWDRLNPSGNQPSGRMYASGSSREDGIFLLCGG 220
Query: 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359
D S V L YGL D W P V+PSPRYQH AVF ++LHV GG L R++
Sbjct: 221 IDHSGVTLGDTYGLKMDSDNVW--TPVPAVAPSPRYQHTAVFGGSKLHVIGGILNRARLI 278
Query: 360 EDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419
+ + VAVLDT G W DT P T SA A +L RRC HAAA+ G ++
Sbjct: 279 DGEAVVAVLDTETGEWVDTNQ----PET---SASGANRQNQYQLMRRCHHAAASFGSHLY 331
Query: 420 IYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTI 479
++ GG+ D LL +DL V E ++ +
Sbjct: 332 VH----GGIREDVLL--DDL------------------------------LVAETSQSSS 355
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PE D NP +N ML L + + ++E EA S
Sbjct: 356 PEPEED------NP---------------DNYML-----LDDYLMDEPKPLSSEPEASSF 389
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGKQMIKPDSAGSNSIAPAGVRLHHRAVVVAAE 599
+ + E+ + DR AEA + ++A +S V L H AE
Sbjct: 390 IMRSTS------EIAM---DRLAEA----HNLPTIENAFYDSAIEGYVPLQH-----GAE 431
Query: 600 TGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPR 659
T G GG+VR S+DQ S + KKVI+ LL+P+
Sbjct: 432 TVGNRGGLVRTASLDQ---------------------------STQDLHKKVISTLLRPK 464
Query: 660 GWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDE 719
W PP R FFL E+ LCD E+IF +EP++LQLK PIK+FGD+HGQ+GDLMRLF E
Sbjct: 465 TWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKVFGDIHGQYGDLMRLFHE 524
Query: 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINA 779
YG PS GDI +IDYLFLGDYVDRGQHSLE I LL ALK+EYP N+HLIRGNHE+ +N
Sbjct: 525 YGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYPKNIHLIRGNHESLAMNR 584
Query: 780 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIEN 839
++GF EC ERMGE G AW +IN++F++LPLAAL+EKK++C+HGGIGR++ +E+IEN
Sbjct: 585 IYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLCVHGGIGRAVT-IEEIEN 643
Query: 840 LQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
++RP + GS+VL D+LWSDPT ND+V G+ NARG G+V+FGPD V F N L++I
Sbjct: 644 IERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSFGPDIVKAFLERNGLEMI 703
Query: 900 VRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAIS 959
+RAHECV+DGFERFA G LIT+FSATNYCGTA NAGAILV+GRD+V+ PKLIHP PP IS
Sbjct: 704 LRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGRDMVIYPKLIHPHPPPIS 763
Query: 960 SPETSPERHIEDTWMQELNANRPPTPTRGR 989
S E E + + WMQELN PPTP RG
Sbjct: 764 SSE---EDYTDKAWMQELNIEMPPTPARGE 790
|
Phosphatase that acts as a positive regulator of brassinolide signaling. Dephosphorylates BES1, a transcription factor that regulates the expression of brassinolide-response genes, thereby playing an important role in the regulation of response to brassinosteroids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48482|PP12_ARATH Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 280 bits (715), Expect = 6e-74, Method: Composition-based stats.
Identities = 148/303 (48%), Positives = 198/303 (65%), Gaps = 15/303 (4%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R KP + Q L+ +EI LC + IF +P++L+L+APIKI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKPGTK-QAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P TA +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFSVR----LWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +VEQI+N++RP T S +L DLLWSDP+++ V+G N RG TFGPD+V EF
Sbjct: 186 LTNVEQIKNIKRP-TDVPDSGLLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAEF 241
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
ND+ LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 242 LIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI 301
Query: 951 IHP 953
+ P
Sbjct: 302 LKP 304
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats.
Identities = 146/309 (47%), Positives = 200/309 (64%), Gaps = 16/309 (5%)
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
++V +I L + R +P +Q L EI LC +A IF +P++L+L+APIKI G
Sbjct: 16 SAVLDDIIRRLTEVRLARPG--KQVQLSEAEIKQLCTTARDIFLQQPNLLELEAPIKICG 73
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
D+HGQ+ DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K++YP N
Sbjct: 74 DIHGQYSDLLRLFEYGGFPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPGN 127
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
L+RGNHE A IN ++GF EC R R W FN LP+AALI+ KI+CMH
Sbjct: 128 FFLLRGNHECASINRIYGFYDECKRRFNVR----VWKVFTDCFNCLPVAALIDDKILCMH 183
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GG+ ++H+++I NL RP TM + +L DLLWSDP ++ V+G N RG TFGP
Sbjct: 184 GGLSPDLDHLDEIRNLPRP-TMIPDTGLLCDLLWSDPGKD--VKGWGMNDRGVSY-TFGP 239
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
D+V EF +DL L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + +L
Sbjct: 240 DKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENL 299
Query: 945 VVVPKLIHP 953
+ +++ P
Sbjct: 300 MCSFQILKP 308
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P22198|PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats.
Identities = 146/303 (48%), Positives = 193/303 (63%), Gaps = 16/303 (5%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
VI LL+ + KP Q L +EI LC +A+ IF +P++L+L+APIKI GD+HGQ+
Sbjct: 9 VIRRLLEVKNLKPGKNAQ--LSESEIKQLCAAAKEIFLQQPNLLELEAPIKICGDVHGQY 66
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLFD G P A +YLFLGDYVDRG+ SLETI LLLA KV+YP N L+RG
Sbjct: 67 SDLLRLFDYGGYPPQA------NYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRG 120
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A +N ++GF EC R + W FN LP++ALI++KI+CMHGG+
Sbjct: 121 NHECASVNRIYGFYDECKRRFSVK----LWKTFTDCFNCLPVSALIDEKILCMHGGLSPE 176
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+N +EQI NL RP + + L DLLWSDP+ + G N RG TFGPD+V EF
Sbjct: 177 LNKLEQILNLNRPTDVPDTGL-LCDLLWSDPS--NEATGWAINDRGVSF-TFGPDKVSEF 232
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+DL LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 233 LEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQI 292
Query: 951 IHP 953
+ P
Sbjct: 293 LKP 295
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|O82734|PP18_ARATH Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 8e-73, Method: Composition-based stats.
Identities = 147/311 (47%), Positives = 200/311 (64%), Gaps = 19/311 (6%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ +G K Q L +EI LC +A +IF S+P++L L API+I GD+HGQ+
Sbjct: 17 IIRRLLEGKGGK-----QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQY 71
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K+ YP+ ++L+RG
Sbjct: 72 QDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRG 125
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AALI++KI+CMHGG+
Sbjct: 126 NHEDAKINRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDEKILCMHGGLSPD 181
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
++++ QI +QRPI + S +L DLLWSDP + +EG + RG TFG D+V EF
Sbjct: 182 LDNLNQIREIQRPIEI-PDSGLLCDLLWSDP--DQKIEGWADSDRGIS-CTFGADKVAEF 237
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ NDL LI R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV ++
Sbjct: 238 LDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEI 297
Query: 951 IHPLPPAISSP 961
+ P P + S P
Sbjct: 298 MKPAPASSSHP 308
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 999 | ||||||
| 225462440 | 1006 | PREDICTED: serine/threonine-protein phos | 0.991 | 0.985 | 0.935 | 0.0 | |
| 449444819 | 1002 | PREDICTED: serine/threonine-protein phos | 0.990 | 0.988 | 0.911 | 0.0 | |
| 356544772 | 1001 | PREDICTED: serine/threonine-protein phos | 0.984 | 0.983 | 0.905 | 0.0 | |
| 42569377 | 1006 | serine/threonine-protein phosphatase BSL | 0.987 | 0.981 | 0.901 | 0.0 | |
| 395133376 | 999 | Ser/Thr phosphatase-containing Kelch rep | 0.986 | 0.986 | 0.903 | 0.0 | |
| 356539201 | 1010 | PREDICTED: serine/threonine-protein phos | 0.988 | 0.978 | 0.910 | 0.0 | |
| 297822385 | 1002 | kelch repeat-containing serine/threonine | 0.988 | 0.986 | 0.904 | 0.0 | |
| 15223207 | 1018 | serine/threonine-protein phosphatase BSL | 0.991 | 0.973 | 0.880 | 0.0 | |
| 222423388 | 1018 | AT1G08420 [Arabidopsis thaliana] | 0.991 | 0.973 | 0.880 | 0.0 | |
| 297843622 | 1017 | kelch repeat-containing protein [Arabido | 0.991 | 0.974 | 0.880 | 0.0 |
| >gi|225462440|ref|XP_002264614.1| PREDICTED: serine/threonine-protein phosphatase BSL3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1787 bits (4628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 938/1003 (93%), Positives = 960/1003 (95%), Gaps = 12/1003 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQ 58
MDVDS+MVPE D DP+ + SMEREQ + S A +QQQ QQ QQ
Sbjct: 1 MDVDSSMVPETDQDPSTPNHGAPSISASMEREQQLGAAEQS---APAQPPAQQQQQQQQQ 57
Query: 59 QQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 118
Q QQ+PV GPR APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL
Sbjct: 58 AQVQQSPVAGPRHAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 117
Query: 119 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAH 178
FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV+TNKWSRITPFGEPPTPRAAH
Sbjct: 118 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVITNKWSRITPFGEPPTPRAAH 177
Query: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ
Sbjct: 178 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 237
Query: 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG
Sbjct: 238 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 297
Query: 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
GRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM
Sbjct: 298 GRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 357
Query: 359 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
VEDSSSVAVLDTAAGVWCDTKSVVTSPRTG+YSADAAGGDAAVELTRRCRHAAAAVGDLI
Sbjct: 358 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGKYSADAAGGDAAVELTRRCRHAAAAVGDLI 417
Query: 419 FIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQ 477
FIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAASN+Q+ RLPGRYGF+DERTRQ
Sbjct: 418 FIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAASNLQAGRLPGRYGFIDERTRQ 477
Query: 478 TIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAI 537
TIPEAAPDGSVVLG PVAPP+NGDMYTDISTENAMLQG+RRL+KGVE LV+ASAAEAEAI
Sbjct: 478 TIPEAAPDGSVVLGTPVAPPVNGDMYTDISTENAMLQGSRRLSKGVEYLVEASAAEAEAI 537
Query: 538 SATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIK-PDSAGSNSIAPAGVRLHHRA 593
SATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IK PDSAGSN+IAPAGVRLHHRA
Sbjct: 538 SATLAAAKARQVNGEVELPDRDRGAEATPSGKQISTLIKMPDSAGSNNIAPAGVRLHHRA 597
Query: 594 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA
Sbjct: 598 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 657
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQ+KAP+KIFGDLHGQFGDL
Sbjct: 658 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQIKAPVKIFGDLHGQFGDL 717
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP NVHLIRGNHE
Sbjct: 718 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNHE 777
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 778 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 837
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 838 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 897
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 898 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 957
Query: 954 LPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
LPPAISSPETSPERH+EDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 958 LPPAISSPETSPERHLEDTWMQELNANRPPTPTRGRPQVTNDR 1000
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444819|ref|XP_004140171.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1784 bits (4620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 911/1000 (91%), Positives = 940/1000 (94%), Gaps = 10/1000 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
M+VDS+MVPE DHDPAV+ +T + D EQP T+ QS PQQ Q
Sbjct: 1 MEVDSSMVPEPDHDPAVQNHSTVSSTAAG---VDREQPQAG-GGTSPQSMSLPQQQQTTV 56
Query: 61 TQQTPVV-GPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILF 119
Q V GPR AP YSVVNA+I+KKEDGPGPRCGHTLTAV +VGEEGTPGYIGPRLILF
Sbjct: 57 QMQQTTVVGPRLAPAYSVVNAIIDKKEDGPGPRCGHTLTAVGSVGEEGTPGYIGPRLILF 116
Query: 120 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHV 179
GGATALEGNSAASGTPSSAGSAGIRLAGATADVHC+DVL NKWSRITP GEPPTPRAAHV
Sbjct: 117 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCFDVLANKWSRITPLGEPPTPRAAHV 176
Query: 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR
Sbjct: 177 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 236
Query: 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299
YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG
Sbjct: 237 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 296
Query: 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359
RDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV
Sbjct: 297 RDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 356
Query: 360 EDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419
EDSSSVAVLDTAAGVWCD KSVVT+PRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIF
Sbjct: 357 EDSSSVAVLDTAAGVWCDIKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIF 416
Query: 420 IYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTI 479
IYGGLRGGVLLDDLLVAED+AAAETT+AASHAAAAAAAS RLP RYGF DER RQT+
Sbjct: 417 IYGGLRGGVLLDDLLVAEDMAAAETTSAASHAAAAAAASVQPGRLPPRYGFTDERARQTM 476
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PEAAPDGSVVLGNPVAPP+NGDMYTDISTENAMLQG RR++KGVE LV+ASAAEAEAISA
Sbjct: 477 PEAAPDGSVVLGNPVAPPVNGDMYTDISTENAMLQGQRRMSKGVEYLVEASAAEAEAISA 536
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRAVVV 596
T AA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDS GSNSIAPAGVRLHHRAVVV
Sbjct: 537 TFAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSTGSNSIAPAGVRLHHRAVVV 596
Query: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLL 656
AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSINSVPKKVIAHLL
Sbjct: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLL 656
Query: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
KPRGWKPPVRRQFFLDCNEIADLCDSAE+IFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL
Sbjct: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAEKIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
Query: 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
FDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY NVHLIRGNHEAAD
Sbjct: 717 FDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYQQNVHLIRGNHEAAD 776
Query: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQ 836
INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV+Q
Sbjct: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVQQ 836
Query: 837 IENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
IEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL
Sbjct: 837 IENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
Query: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP
Sbjct: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
Query: 957 AISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
A++SPE SPERH+EDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 957 AMTSPEASPERHLEDTWMQELNANRPPTPTRGRPQVTNDR 996
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544772|ref|XP_003540821.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1758 bits (4554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 910/1005 (90%), Positives = 942/1005 (93%), Gaps = 21/1005 (2%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQP-----SGSPASTTSQSQQQPQQ 55
MDVDS+MVPE DHDP V+ ER+QL ++ P GSPA Q QQP
Sbjct: 1 MDVDSSMVPEPDHDPPVQNH------AERDQLGESPSPPPSEGGGSPA----QPHQQPLP 50
Query: 56 HQQQQTQQ-TPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP 114
Q QQ P+VGPR APTYSVVNA++EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP
Sbjct: 51 PTAAQVQQPNPLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP 110
Query: 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTP 174
RLILFGGATALEGNSA SGTPSSAG+AGIRLAGATAD+HCYDV+TNKWSRITP GEPP+
Sbjct: 111 RLILFGGATALEGNSAVSGTPSSAGNAGIRLAGATADIHCYDVITNKWSRITPIGEPPSS 170
Query: 175 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234
RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV V GPGPGPRYGHVMA
Sbjct: 171 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMA 230
Query: 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294
LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL
Sbjct: 231 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 290
Query: 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 354
LLCGGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG
Sbjct: 291 LLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 350
Query: 355 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414
GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAA+
Sbjct: 351 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAI 410
Query: 415 GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDER 474
GDLIFIYGGLRGGVLLDDLLVAEDLAAAETT A+ AAAAAA++ RLPGRYGF+D+R
Sbjct: 411 GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASHAAAAAAASNVQAGRLPGRYGFIDDR 470
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
TRQT+PE PDGSVVLGNPVAPP+NGDMYTDISTENA+L G+RR +KGVE LV+ASAAEA
Sbjct: 471 TRQTMPETDPDGSVVLGNPVAPPVNGDMYTDISTENALLPGSRRTSKGVEYLVEASAAEA 530
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDSAGSNSI P GVRLHH
Sbjct: 531 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHH 590
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPES TAARKLLDRQMSINSVPKKV
Sbjct: 591 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESTTAARKLLDRQMSINSVPKKV 650
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDLHGQFG
Sbjct: 651 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFG 710
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETI+LLLALKVEYPNNVHLIRGN
Sbjct: 711 DLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGN 770
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 771 HEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 830
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 831 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 890
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 891 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 950
Query: 952 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 951 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDR 995
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42569377|ref|NP_180289.3| serine/threonine-protein phosphatase BSL3 [Arabidopsis thaliana] gi|160359047|sp|Q9SHS7.2|BSL3_ARATH RecName: Full=Serine/threonine-protein phosphatase BSL3; AltName: Full=BSU1-like protein 3 gi|330252859|gb|AEC07953.1| serine/threonine-protein phosphatase BSL3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1758 bits (4553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1001 (90%), Positives = 940/1001 (93%), Gaps = 14/1001 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTS-----EESMEREQLADTEQPSGSPASTTSQSQQQPQQ 55
MD+DS+MVPE D DP EN S EE+ E++ +++E S +P+ QQQ
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPMEEKEEASEQQTGSESESASLTPSLPPPSQQQQ--- 57
Query: 56 HQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPR 115
QQQQ Q T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPR
Sbjct: 58 QQQQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPR 117
Query: 116 LILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPR 175
LILFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKWSR+TP+GEPP+PR
Sbjct: 118 LILFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPR 177
Query: 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235
AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL
Sbjct: 178 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 237
Query: 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295
VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL
Sbjct: 238 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 297
Query: 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG 355
LCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGG
Sbjct: 298 LCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGG 357
Query: 356 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVG 415
GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVG
Sbjct: 358 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVG 417
Query: 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDER 474
DLIFIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DER
Sbjct: 418 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDER 477
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
T + +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KGVE LV+ASAAEA
Sbjct: 478 TGE-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEA 535
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHH
Sbjct: 536 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHH 595
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV
Sbjct: 596 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 655
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFG
Sbjct: 656 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFG 715
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGN
Sbjct: 716 DLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGN 775
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 776 HEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 835
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 836 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 895
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 896 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 955
Query: 952 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
HPLPPAI+SPETSPERHIEDTWMQELN NRPPTPTRGRPQN
Sbjct: 956 HPLPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQN 996
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395133376|gb|AFN44701.1| Ser/Thr phosphatase-containing Kelch repeat domain protein [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1756 bits (4549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 904/1001 (90%), Positives = 929/1001 (92%), Gaps = 15/1001 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS M E+DH EN S EQL GSP T QQ QQQ
Sbjct: 1 MDVDSTMSSESDH-----AENKGASS---EQLNGQSSAGGSPPETPKDEQQPATSQPQQQ 52
Query: 61 TQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFG 120
TPVVGPRCAPTYSVV+AV+EKKEDGPGPRCGHTLTAV AVGEEG+P YIGPRLILFG
Sbjct: 53 QGSTPVVGPRCAPTYSVVHAVMEKKEDGPGPRCGHTLTAVPAVGEEGSPNYIGPRLILFG 112
Query: 121 GATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVA 180
GATALEGNSA SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSR+TP GEPPTPRAAHVA
Sbjct: 113 GATALEGNSAGSGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRMTPIGEPPTPRAAHVA 172
Query: 181 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240
TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY
Sbjct: 173 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 232
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR
Sbjct: 233 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 292
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
DA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVE
Sbjct: 293 DANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVE 352
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DSSS+AVLDTAAGVWCDT SVVTSPRTGR+SADAAGGDAAVELTRRCRHAA AVGDLIFI
Sbjct: 353 DSSSIAVLDTAAGVWCDTTSVVTSPRTGRFSADAAGGDAAVELTRRCRHAAVAVGDLIFI 412
Query: 421 YGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQTI 479
YGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA NVQ+ RL GRYGF DERTRQT
Sbjct: 413 YGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAAVNVQAGRLTGRYGFGDERTRQTD 472
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PEA DGSVVLG PVAPP+NGDMY+DIS+ENA QG RRL KGVE LV+ASAAEAEAI+A
Sbjct: 473 PEAVNDGSVVLGTPVAPPVNGDMYSDISSENATFQGPRRLIKGVEYLVEASAAEAEAITA 532
Query: 540 TLAAVKARQV-NGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRAVV 595
TLAA KARQ NGEVELPDRDRGAEATPSGKQ +IKPD A SN+ APAGVRLHHRAVV
Sbjct: 533 TLAAAKARQQGNGEVELPDRDRGAEATPSGKQASTLIKPDFALSNNSAPAGVRLHHRAVV 592
Query: 596 VAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHL 655
+AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSINSVPKKVI HL
Sbjct: 593 IAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVITHL 652
Query: 656 LKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMR 715
LKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEPSV+QLKAPIKIFGDLHGQFGDLMR
Sbjct: 653 LKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPSVIQLKAPIKIFGDLHGQFGDLMR 712
Query: 716 LFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775
LFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLET+TLLLALKVEYP NVHLIRGNHEAA
Sbjct: 713 LFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETMTLLLALKVEYPLNVHLIRGNHEAA 772
Query: 776 DINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVE 835
DINALFGFRIECIERMGERDGIWAWHR NRLFNWLPLAALIEKKIICMHGGIGRSINHVE
Sbjct: 773 DINALFGFRIECIERMGERDGIWAWHRFNRLFNWLPLAALIEKKIICMHGGIGRSINHVE 832
Query: 836 QIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND 895
QIEN+QRPITM+AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND
Sbjct: 833 QIENIQRPITMDAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND 892
Query: 896 LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955
LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP
Sbjct: 893 LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 952
Query: 956 PAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
PAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 953 PAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVANDR 993
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539201|ref|XP_003538088.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1755 bits (4545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 920/1010 (91%), Positives = 950/1010 (94%), Gaps = 22/1010 (2%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS+MVPE DHDP V+ ER+QL D+ PS S + QQ QQQQ
Sbjct: 1 MDVDSSMVPEPDHDPPVQNH------AERDQLGDSPSPSLSEGGGSLAQSPPQQQQQQQQ 54
Query: 61 T----------QQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPG 110
Q +VGPR APTYSVVNA++EKKEDGPGPRCGHTLTAVAAVGEEGT G
Sbjct: 55 QPPPATAAQVHQPNSLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSG 114
Query: 111 YIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGE 170
YIGPRLILFGGATALEGNSAASGTPSSAG+AGIRLAGATADVHCYDV++NKWSRITP GE
Sbjct: 115 YIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVISNKWSRITPIGE 174
Query: 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230
PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV V GPGPGPRYG
Sbjct: 175 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYG 234
Query: 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290
HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS
Sbjct: 235 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 294
Query: 291 DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350
DGLLLLCGGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG
Sbjct: 295 DGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 354
Query: 351 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA 410
GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA
Sbjct: 355 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA 414
Query: 411 AAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYG 469
AAA+GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ+ RLPGRYG
Sbjct: 415 AAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGRLPGRYG 474
Query: 470 FVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQA 529
F+D+RTRQT+PEAA DGSVVLGNPVAPP+NGDMYTDISTENA+L GTRR +KGVE LV+A
Sbjct: 475 FIDDRTRQTMPEAASDGSVVLGNPVAPPVNGDMYTDISTENALLPGTRRTSKGVEYLVEA 534
Query: 530 SAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAG 586
SAAEAEAISATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDSAGSNSI P G
Sbjct: 535 SAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGG 594
Query: 587 VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS 646
VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS
Sbjct: 595 VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS 654
Query: 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDL 706
VPKKV+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDL
Sbjct: 655 VPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDL 714
Query: 707 HGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVH 766
HGQFGDLMRLF+EYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETI+LLLALKVEYPNNVH
Sbjct: 715 HGQFGDLMRLFEEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVH 774
Query: 767 LIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826
LIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGG
Sbjct: 775 LIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGG 834
Query: 827 IGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886
IGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR
Sbjct: 835 IGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 894
Query: 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV 946
VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV
Sbjct: 895 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV 954
Query: 947 VPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
VPKLIHPLPPAISSP+TSPERHIEDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 955 VPKLIHPLPPAISSPDTSPERHIEDTWMQELNANRPPTPTRGRPQVTNDR 1004
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297822385|ref|XP_002879075.1| kelch repeat-containing serine/threonine phosphoesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324914|gb|EFH55334.1| kelch repeat-containing serine/threonine phosphoesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1754 bits (4542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 901/996 (90%), Positives = 937/996 (94%), Gaps = 8/996 (0%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MD+DS+MVPE D DP EN + ME+E + + +GS + + S + P QQQ
Sbjct: 1 MDLDSSMVPENDQDPVATPEN-HQSPMEKEASEQSTEETGSESESASLTPPSPPSQQQQP 59
Query: 61 TQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFG 120
T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT GYIGPRLILFG
Sbjct: 60 QVTT-VVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSGYIGPRLILFG 118
Query: 121 GATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVA 180
GATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVLTNKWSR+TP+GEPP+PRAAHVA
Sbjct: 119 GATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLTNKWSRLTPYGEPPSPRAAHVA 178
Query: 181 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240
TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY
Sbjct: 179 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 238
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR
Sbjct: 239 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 298
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
DA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVE
Sbjct: 299 DANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGRMVE 358
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIFI
Sbjct: 359 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFI 418
Query: 421 YGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDERTRQTI 479
YGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DERT + +
Sbjct: 419 YGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNSPPGRSPGRYGFSDERTGE-L 477
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PE+APD SVVLG+PVAPP+NGDMYTDISTENAM+ GTRR +KGVE LV+ASAAEAEAISA
Sbjct: 478 PESAPD-SVVLGSPVAPPVNGDMYTDISTENAMVPGTRRTSKGVEYLVEASAAEAEAISA 536
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRAVVV 596
TLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHHRAVVV
Sbjct: 537 TLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRAVVV 596
Query: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLL 656
AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV+AHLL
Sbjct: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLL 656
Query: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFGDLMRL
Sbjct: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRL 716
Query: 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
FDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGNHEAAD
Sbjct: 717 FDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHEAAD 776
Query: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQ 836
INALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIE KIICMHGGIGRSINHVEQ
Sbjct: 777 INALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIENKIICMHGGIGRSINHVEQ 836
Query: 837 IENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
IEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL
Sbjct: 837 IENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
Query: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP
Sbjct: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
Query: 957 AISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
AI+SPETSPERHIEDTWMQELNANRPPTPTRGRPQN
Sbjct: 957 AITSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15223207|ref|NP_172318.1| serine/threonine-protein phosphatase BSL2 [Arabidopsis thaliana] gi|160359046|sp|Q9SJF0.2|BSL2_ARATH RecName: Full=Serine/threonine-protein phosphatase BSL2; AltName: Full=BSU1-like protein 2 gi|332190166|gb|AEE28287.1| serine/threonine-protein phosphatase BSL2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1752 bits (4537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1008 (88%), Positives = 929/1008 (92%), Gaps = 17/1008 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--SGS------PASTTS 47
MD DS+MV + D D + + S MERE Q+ D P GS +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222423388|dbj|BAH19666.1| AT1G08420 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1008 (88%), Positives = 929/1008 (92%), Gaps = 17/1008 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--SGS------PASTTS 47
MD DS+MV + D D + + S MERE Q+ D P GS +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQVNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297843622|ref|XP_002889692.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335534|gb|EFH65951.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 887/1007 (88%), Positives = 926/1007 (91%), Gaps = 16/1007 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQPSGSPASTTSQSQ----- 50
MD DS+MV + D D + + S MERE Q+ D P G T S
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPEGGSVPTPPPSDPNPTS 60
Query: 51 --QQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGT 108
QQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EGT
Sbjct: 61 SPQQAAAVVGQEQQPAQVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGT 120
Query: 109 PGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168
PGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TPF
Sbjct: 121 PGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPF 180
Query: 169 GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228
GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR
Sbjct: 181 GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 240
Query: 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA 288
YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA
Sbjct: 241 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA 300
Query: 289 RSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348
RSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHV
Sbjct: 301 RSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHV 360
Query: 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCR 408
SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCR
Sbjct: 361 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCR 420
Query: 409 HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRY 468
HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGRY
Sbjct: 421 HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRY 480
Query: 469 GFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQ 528
GF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA L GTRR KGVE LV+
Sbjct: 481 GFSDERNRE-LSESATDGAVVLGSPVAPPVNGDMHTDISPENAFLPGTRRTNKGVEYLVE 539
Query: 529 ASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPA 585
ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ PA
Sbjct: 540 ASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPA 599
Query: 586 GVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 645
G+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN
Sbjct: 600 GIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 659
Query: 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 705
SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFGD
Sbjct: 660 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGD 719
Query: 706 LHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765
LHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +NV
Sbjct: 720 LHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNV 779
Query: 766 HLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825
HLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMHG
Sbjct: 780 HLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHG 839
Query: 826 GIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885
GIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD
Sbjct: 840 GIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 899
Query: 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV
Sbjct: 900 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 959
Query: 946 VVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1006
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 999 | ||||||
| TAIR|locus:2059610 | 1006 | BSL3 "BRI1 suppressor 1 (BSU1) | 0.989 | 0.983 | 0.823 | 0.0 | |
| TAIR|locus:2201776 | 1018 | BSL2 "BRI1 suppressor 1 (BSU1) | 0.926 | 0.909 | 0.859 | 0.0 | |
| TAIR|locus:2139399 | 881 | BSL1 "BRI1 suppressor 1 (BSU1) | 0.428 | 0.485 | 0.741 | 1.9e-287 | |
| TAIR|locus:2825042 | 793 | BSU1 "BRI1 SUPPRESSOR 1" [Arab | 0.342 | 0.431 | 0.632 | 1e-201 | |
| GENEDB_PFALCIPARUM|PF14_0630 | 889 | PF14_0630 "protein serine/thre | 0.271 | 0.304 | 0.511 | 2.2e-115 | |
| UNIPROTKB|Q8IKH5 | 889 | PF14_0630 "Serine/threonine-pr | 0.271 | 0.304 | 0.511 | 2.2e-115 | |
| TAIR|locus:2168484 | 312 | TOPP2 "AT5G59160" [Arabidopsis | 0.288 | 0.923 | 0.488 | 4.4e-68 | |
| TAIR|locus:2063942 | 321 | TOPP4 "type one serine/threoni | 0.298 | 0.928 | 0.473 | 1.9e-67 | |
| TAIR|locus:2180330 | 324 | TOPP8 "AT5G27840" [Arabidopsis | 0.292 | 0.901 | 0.469 | 1.7e-66 | |
| UNIPROTKB|P36874 | 323 | ppp1cc-a "Serine/threonine-pro | 0.299 | 0.925 | 0.455 | 2.3e-66 |
| TAIR|locus:2059610 BSL3 "BRI1 suppressor 1 (BSU1)-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4285 (1513.5 bits), Expect = 0., P = 0.
Identities = 823/999 (82%), Positives = 853/999 (85%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEXXXXXXXXXXXXXX---XXXXXXX 57
MD+DS+MVPE D DP EN S E+E+ ++ +
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPME-EKEEASEQQTGSESESASLTPSLPPPSQQQQQQ 59
Query: 58 XXXXXXXXVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLI 117
VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPRLI
Sbjct: 60 QQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLI 119
Query: 118 LFGGATALEXXXXXXXXXXXXXXXXIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAA 177
LFGGATALE IRLAGATADVHCYDVL+NKWSR+TP+GEPP+PRAA
Sbjct: 120 LFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPRAA 179
Query: 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237
HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG
Sbjct: 180 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 239
Query: 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297
QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC
Sbjct: 240 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 299
Query: 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR 357
GGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGR
Sbjct: 300 GGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGR 359
Query: 358 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 417
MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDL
Sbjct: 360 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDL 419
Query: 418 IFIYGGLRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQ-SRLPGRYGFVDERTR 476
IFIYGGLRGG N R PGRYGF DERT
Sbjct: 420 IFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDERTG 479
Query: 477 QTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGXXXXXXXXXXXXXX 536
+ +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KG
Sbjct: 480 E-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEAEA 537
Query: 537 XXXXXXXXKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRX 593
KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHHR
Sbjct: 538 ISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRA 597
Query: 594 XXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
ETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV+A
Sbjct: 598 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVA 657
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFGDL
Sbjct: 658 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDL 717
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGNHE
Sbjct: 718 MRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHE 777
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 778 AADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 837
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 838 VEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 897
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 898 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 957
Query: 954 LPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
LPPAI+SPETSPERHIEDTWMQELN NRPPTPTRGRPQN
Sbjct: 958 LPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQN 996
|
|
| TAIR|locus:2201776 BSL2 "BRI1 suppressor 1 (BSU1)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4220 (1490.6 bits), Expect = 0., P = 0.
Identities = 799/930 (85%), Positives = 829/930 (89%)
Query: 66 VVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATAL 125
VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EGTPGYIGPRL+LFGGATAL
Sbjct: 79 VVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATAL 138
Query: 126 EXXXXXXXXXXXXXXXXIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT 185
E IRLAGATADVHCYDVL+NKW+R+TPFGEPPTPRAAHVATAVGT
Sbjct: 139 EGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGT 198
Query: 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245
MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG
Sbjct: 199 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 258
Query: 246 GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305
GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA+SV
Sbjct: 259 GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSV 318
Query: 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSV 365
PLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVEDSSSV
Sbjct: 319 PLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSV 378
Query: 366 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR 425
AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIFIYGGLR
Sbjct: 379 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLR 438
Query: 426 GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQSRLPGRYGFVDERTRQTIPEAAPD 485
GG + RLPGRYGF DER R+ + E+A D
Sbjct: 439 GGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRYGFSDERNRE-LSESAAD 497
Query: 486 GSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGXXXXXXXXXXXXXXXXXXXXXXK 545
G+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KG K
Sbjct: 498 GAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLVEASAAEAEAISATLAAAK 557
Query: 546 ARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRXXXXXXETGG 602
ARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ PAG+RLHHR ETGG
Sbjct: 558 ARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPAGIRLHHRAVVVAAETGG 617
Query: 603 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK 662
ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK
Sbjct: 618 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK 677
Query: 663 PPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 722
PPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFGDLHGQFGDLMRLFDEYGS
Sbjct: 678 PPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 737
Query: 723 PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFG 782
PSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +NVHLIRGNHEAADINALFG
Sbjct: 738 PSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNVHLIRGNHEAADINALFG 797
Query: 783 FRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR 842
FRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMHGGIGRSINHVEQIEN+QR
Sbjct: 798 FRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHGGIGRSINHVEQIENIQR 857
Query: 843 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 902
PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA
Sbjct: 858 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 917
Query: 903 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPE 962
HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA+SSPE
Sbjct: 918 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPE 977
Query: 963 TSPERHIEDTWMQELNANRPPTPTRGRPQN 992
TSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 978 TSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
|
| TAIR|locus:2139399 BSL1 "BRI1 suppressor 1 (BSU1)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1665 (591.2 bits), Expect = 1.9e-287, Sum P(2) = 1.9e-287
Identities = 319/430 (74%), Positives = 348/430 (80%)
Query: 566 PSGKQMIKP--DSAGSNSIAPAGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRV 623
PS P +S + VRLH R ET G+LGGMVRQLS+DQF+NE RR+
Sbjct: 443 PSTSDASSPIVESTTDGTANEGDVRLHPRAVVVAKETVGSLGGMVRQLSLDQFQNESRRM 502
Query: 624 SYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSA 683
K RQ S + KKVIA LL+PR WKPP R+FFLD E+ +LC +A
Sbjct: 503 VPMNNSDVPQPTKKFTRQKSPQGLHKKVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAA 562
Query: 684 ERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR 743
E+IF E +VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI YIDYLFLGDYVDR
Sbjct: 563 EQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR 622
Query: 744 GQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRI 803
GQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIERMGE DGIWAW R
Sbjct: 623 GQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 682
Query: 804 NRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTE 863
N+LFN+LPLAALIE KIICMHGGIGRSI+ VEQIE ++RPITM+AGS+VLMDLLWSDPTE
Sbjct: 683 NQLFNYLPLAALIENKIICMHGGIGRSISTVEQIEKIERPITMDAGSLVLMDLLWSDPTE 742
Query: 864 NDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFS 923
NDS+EGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDGFERFAQG LITLFS
Sbjct: 743 NDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFS 802
Query: 924 ATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPP 983
ATNYCGTANNAGAILV+GR LV+VPKLIHPLPP I SPE SPE +D WMQELN RPP
Sbjct: 803 ATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPILSPENSPEHSGDDAWMQELNIQRPP 862
Query: 984 TPTRGRPQND 993
TPTRGRPQ D
Sbjct: 863 TPTRGRPQPD 872
|
|
| TAIR|locus:2825042 BSU1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1195 (425.7 bits), Expect = 1.0e-201, Sum P(3) = 1.0e-201
Identities = 219/346 (63%), Positives = 270/346 (78%)
Query: 643 SINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKI 702
S + KKVI+ LL+P+ W PP R FFL E+ LCD E+IF +EP++LQLK PIK+
Sbjct: 448 STQDLHKKVISTLLRPKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKV 507
Query: 703 FGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762
FGD+HGQ+GDLMRLF EYG PS GDI +IDYLFLGDYVDRGQHSLE I LL ALK+EYP
Sbjct: 508 FGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYP 567
Query: 763 NNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIIC 822
N+HLIRGNHE+ +N ++GF EC ERMGE G AW +IN++F++LPLAAL+EKK++C
Sbjct: 568 KNIHLIRGNHESLAMNRIYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLC 627
Query: 823 MHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTF 882
+HGGIGR++ +E+IEN++RP + GS+VL D+LWSDPT ND+V G+ NARG G+V+F
Sbjct: 628 VHGGIGRAVT-IEEIENIERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSF 686
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
GPD V F N L++I+RAHECV+DGFERFA G LIT+FSATNYCGTA NAGAILV+GR
Sbjct: 687 GPDIVKAFLERNGLEMILRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGR 746
Query: 943 DLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRG 988
D+V+ PKLIHP PP ISS E E + + WMQELN PPTP RG
Sbjct: 747 DMVIYPKLIHPHPPPISSSE---EDYTDKAWMQELNIEMPPTPARG 789
|
|
| GENEDB_PFALCIPARUM|PF14_0630 PF14_0630 "protein serine/threonine phosphatase" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 150/293 (51%), Positives = 191/293 (65%)
Query: 718 DEYGSPSTA-GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
++ G A GDI DYLFLGDYVDRG +SLE I LL ALK +YP +HLIRGNHE
Sbjct: 603 EDLGEKLNAIGDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVA 662
Query: 777 INALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV 834
IN+L+GF+ EC R+ E D W++IN++F WLP+ A++E KI+C+HGGIG+SIN +
Sbjct: 663 INSLYGFQEECKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQI 722
Query: 835 EQIENLQRPITMEA-----GSIVLMDLLWSDPTENDSVEGLRPN-ARGPG----LVTFGP 884
I L+RP+ + + DLLWSDPT+NDS+ G PN R P +V +GP
Sbjct: 723 SDISQLKRPLVVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGP 782
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRV +F NDLQLI+RAHECVMDGFERFA G LITLFSATNYC + NAGA+L + RDL
Sbjct: 783 DRVHKFLEENDLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDL 842
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQNDRVAF 997
V+PKLI+P E +TW ++ RPPTP R +P+ + F
Sbjct: 843 TVIPKLIYP---------AKDEVRFFNTWDTKMTELRPPTPPRNQPKMRELNF 886
|
|
| UNIPROTKB|Q8IKH5 PF14_0630 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 150/293 (51%), Positives = 191/293 (65%)
Query: 718 DEYGSPSTA-GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
++ G A GDI DYLFLGDYVDRG +SLE I LL ALK +YP +HLIRGNHE
Sbjct: 603 EDLGEKLNAIGDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVA 662
Query: 777 INALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV 834
IN+L+GF+ EC R+ E D W++IN++F WLP+ A++E KI+C+HGGIG+SIN +
Sbjct: 663 INSLYGFQEECKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQI 722
Query: 835 EQIENLQRPITMEA-----GSIVLMDLLWSDPTENDSVEGLRPN-ARGPG----LVTFGP 884
I L+RP+ + + DLLWSDPT+NDS+ G PN R P +V +GP
Sbjct: 723 SDISQLKRPLVVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGP 782
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRV +F NDLQLI+RAHECVMDGFERFA G LITLFSATNYC + NAGA+L + RDL
Sbjct: 783 DRVHKFLEENDLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDL 842
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQNDRVAF 997
V+PKLI+P E +TW ++ RPPTP R +P+ + F
Sbjct: 843 TVIPKLIYP---------AKDEVRFFNTWDTKMTELRPPTPPRNQPKMRELNF 886
|
|
| TAIR|locus:2168484 TOPP2 "AT5G59160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 148/303 (48%), Positives = 198/303 (65%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R KP + Q L+ +EI LC + IF +P++L+L+APIKI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKPGTK-QAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P TA +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFSVR----LWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +VEQI+N++RP T S +L DLLWSDP+++ V+G N RG TFGPD+V EF
Sbjct: 186 LTNVEQIKNIKRP-TDVPDSGLLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAEF 241
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
ND+ LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 242 LIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI 301
Query: 951 IHP 953
+ P
Sbjct: 302 LKP 304
|
|
| TAIR|locus:2063942 TOPP4 "type one serine/threonine protein phosphatase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 149/315 (47%), Positives = 204/315 (64%)
Query: 640 RQMSINS-VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA 698
+Q +I+S V +I L + R +P +Q L EI LC +A IF +P++L+L+A
Sbjct: 10 QQTAIDSAVLDDIIRRLTEVRLARPG--KQVQLSEAEIKQLCTTARDIFLQQPNLLELEA 67
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
PIKI GD+HGQ+ DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K
Sbjct: 68 PIKICGDIHGQYSDLLRLFEYGGFPPSA------NYLFLGDYVDRGKQSLETICLLLAYK 121
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEK 818
++YP N L+RGNHE A IN ++GF EC R R W FN LP+AALI+
Sbjct: 122 IKYPGNFFLLRGNHECASINRIYGFYDECKRRFNVR----VWKVFTDCFNCLPVAALIDD 177
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
KI+CMHGG+ ++H+++I NL RP TM + +L DLLWSDP ++ V+G N RG
Sbjct: 178 KILCMHGGLSPDLDHLDEIRNLPRP-TMIPDTGLLCDLLWSDPGKD--VKGWGMNDRGVS 234
Query: 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
TFGPD+V EF +DL L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++
Sbjct: 235 Y-TFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMM 293
Query: 939 VLGRDLVVVPKLIHP 953
+ +L+ +++ P
Sbjct: 294 SVDENLMCSFQILKP 308
|
|
| TAIR|locus:2180330 TOPP8 "AT5G27840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 146/311 (46%), Positives = 199/311 (63%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ +G K Q L +EI LC +A +IF S+P++L L API+I GD+HGQ+
Sbjct: 17 IIRRLLEGKGGK-----QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQY 71
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K+ YP+ ++L+RG
Sbjct: 72 QDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRG 125
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AALI++KI+CMHGG+
Sbjct: 126 NHEDAKINRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDEKILCMHGGLSPD 181
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
++++ QI +QRPI + + L DLLWSDP + +EG + RG TFG D+V EF
Sbjct: 182 LDNLNQIREIQRPIEIPDSGL-LCDLLWSDPDQK--IEGWADSDRGISC-TFGADKVAEF 237
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ NDL LI R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV ++
Sbjct: 238 LDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEI 297
Query: 951 IHPLPPAISSP 961
+ P P + S P
Sbjct: 298 MKPAPASSSHP 308
|
|
| UNIPROTKB|P36874 ppp1cc-a "Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 650 (233.9 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 145/318 (45%), Positives = 194/318 (61%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ RG KP Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 12 IIQRLLEVRGSKPGKNVQ--LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 69
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 70 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 123
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 124 NHECASINRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPD 179
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +EQI + RP + + L DLLWSDP ++ V G N RG TFG + V +F
Sbjct: 180 LQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKF 235
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ ++
Sbjct: 236 LHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQI 295
Query: 951 IHPLP---PAISSPETSP 965
+ P P S P T P
Sbjct: 296 LKPAEKKKPNASRPVTPP 313
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SHS7 | BSL3_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.9010 | 0.9879 | 0.9811 | yes | no |
| Q9SJF0 | BSL2_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.8809 | 0.9919 | 0.9734 | no | no |
| Q2QM47 | BSL2_ORYSJ | 3, ., 1, ., 3, ., 1, 6 | 0.8517 | 0.9929 | 0.9831 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00007485001 | RecName- Full=Serine/threonine protein phosphatase; EC=3.1.3.16; (978 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 999 | |||
| cd07419 | 311 | cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho | 0.0 | |
| smart00156 | 271 | smart00156, PP2Ac, Protein phosphatase 2A homologu | 1e-108 | |
| cd07414 | 293 | cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li | 1e-100 | |
| cd07415 | 285 | cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos | 6e-87 | |
| PTZ00480 | 320 | PTZ00480, PTZ00480, serine/threonine-protein phosp | 9e-79 | |
| cd00144 | 225 | cd00144, MPP_PPP_family, phosphoprotein phosphatas | 1e-72 | |
| PTZ00244 | 294 | PTZ00244, PTZ00244, serine/threonine-protein phosp | 3e-69 | |
| cd07416 | 305 | cd07416, MPP_PP2B, PP2B, metallophosphatase domain | 2e-67 | |
| PTZ00239 | 303 | PTZ00239, PTZ00239, serine/threonine protein phosp | 3e-67 | |
| cd07417 | 316 | cd07417, MPP_PP5_C, PP5, C-terminal metallophospha | 2e-66 | |
| cd07420 | 321 | cd07420, MPP_RdgC, Drosophila melanogaster RdgC an | 1e-50 | |
| cd07418 | 377 | cd07418, MPP_PP7, PP7, metallophosphatase domain | 4e-39 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 1e-27 | |
| COG0639 | 155 | COG0639, ApaH, Diadenosine tetraphosphatase and re | 3e-12 | |
| cd07422 | 257 | cd07422, MPP_ApaH, Escherichia coli ApaH and relat | 6e-10 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-09 | |
| cd07424 | 207 | cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophos | 6e-09 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-08 | |
| PRK00166 | 275 | PRK00166, apaH, diadenosine tetraphosphatase; Revi | 5e-07 | |
| PHA02239 | 235 | PHA02239, PHA02239, putative protein phosphatase | 2e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-06 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-06 | |
| cd07425 | 208 | cd07425, MPP_Shelphs, Shewanella-like phosphatases | 7e-06 | |
| cd07421 | 304 | cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo | 2e-05 | |
| pfam07646 | 48 | pfam07646, Kelch_2, Kelch motif | 2e-05 | |
| cd07423 | 234 | cd07423, MPP_PrpE, Bacillus subtilis PrpE and rela | 1e-04 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-04 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 5e-04 | |
| cd07413 | 222 | cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 | 8e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 0.001 | |
| TIGR04075 | 851 | TIGR04075, bacter_Pnkp, polynucleotide kinase-phos | 0.003 | |
| PRK13625 | 245 | PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphospha | 0.004 |
| >gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 630 bits (1626), Expect = 0.0
Identities = 239/311 (76%), Positives = 262/311 (84%), Gaps = 8/311 (2%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I HLLKPR WKPP R+FF + NEI +LCD+AE IF EP VL+L+APIKIFGD+HGQF
Sbjct: 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQF 60
Query: 711 GDLMRLFDEYGSPST--AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLI 768
GDLMRLFDEYGSP T AGDI YIDYLFLGDYVDRG +SLETI LLLALKV+YPN +HLI
Sbjct: 61 GDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLI 120
Query: 769 RGNHEAADINALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826
RGNHE DINALFGFR EC ER+GE DG W RINRLF WLPLAA+IE KI+CMHGG
Sbjct: 121 RGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGG 180
Query: 827 IGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNA---RGPGL-VTF 882
IGRSINHV +IE+L+RP+TME G V+MDLLWSDPTENDSV GLRPNA RGPGL V F
Sbjct: 181 IGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
GPDRV F NDLQ+I+RAHECVMDGFERFAQG LITLFSATNYCGTA NAGAILVLGR
Sbjct: 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGR 300
Query: 943 DLVVVPKLIHP 953
DL ++PKLIHP
Sbjct: 301 DLTIIPKLIHP 311
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 311 |
| >gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Score = 336 bits (863), Expect = e-108
Identities = 127/272 (46%), Positives = 171/272 (62%), Gaps = 14/272 (5%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
EI +L + IF EP+++++ AP+ + GD+HGQF DL+RLFD+ G P +
Sbjct: 4 EEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDKNGQP------PETN 57
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
Y+FLGDYVDRG S+E I LL ALK+ YPN + L+RGNHE+ +N ++GF EC + GE
Sbjct: 58 YVFLGDYVDRGPFSIEVILLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKYGE 117
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
R I+ N F+WLPLAALI KI+CMHGG+ + ++ I L+RP + L
Sbjct: 118 R--IYEK--FNEAFSWLPLAALINGKILCMHGGLSPDLTTLDDIRKLKRPQEPPDDGL-L 172
Query: 854 MDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERF 913
+DLLWSDP V G P+ RG FGPD V EF N+L+LI+RAH+ V DG+E F
Sbjct: 173 IDLLWSDPD--QPVNGFGPSIRGAS-YIFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFF 229
Query: 914 AQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
A G L+T+FSA NYC N A+L + +DL
Sbjct: 230 ADGKLVTIFSAPNYCDRFGNKAAVLKVDKDLK 261
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. Length = 271 |
| >gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-100
Identities = 142/305 (46%), Positives = 192/305 (62%), Gaps = 18/305 (5%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ RG +P + L EI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 5 IIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 62
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 63 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 116
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R I W FN LP+AA+I++KI CMHGG+
Sbjct: 117 NHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPD 172
Query: 831 INHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + G +L DLLWSDP ++ V+G N RG TFG D V +
Sbjct: 173 LQSMEQIRRIMRPTDVPDQG--LLCDLLWSDPDKD--VQGWGENDRGVS-FTFGKDVVAK 227
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F N +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 228 FLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 287
Query: 950 LIHPL 954
++ P
Sbjct: 288 ILKPA 292
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293 |
| >gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 6e-87
Identities = 118/272 (43%), Positives = 164/272 (60%), Gaps = 16/272 (5%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
+E+ LC+ A+ I E +V ++++P+ + GD+HGQF DL+ LF GD +
Sbjct: 18 SEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELF------RVGGDPPDTN 71
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
YLFLGDYVDRG +S+ET LLLALKV YP+ + L+RGNHE+ I ++GF EC+ + G
Sbjct: 72 YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYG- 130
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
W LF++LPLAALI+ +I C+HGG+ SI+ ++QI + R E
Sbjct: 131 --NANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDR--FQEVPHEGP 186
Query: 854 M-DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
M DLLWSDP D +EG + RG G FG D V EF +NN L LI RAH+ VM+G++
Sbjct: 187 MCDLLWSDP---DDIEGWGISPRGAG-YLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQW 242
Query: 913 FAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
L+T++SA NYC N +I+ L L
Sbjct: 243 MFDDKLVTVWSAPNYCYRCGNVASIMELDEHL 274
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285 |
| >gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 9e-79
Identities = 139/315 (44%), Positives = 194/315 (61%), Gaps = 18/315 (5%)
Query: 639 DRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA 698
D++ I+ +I LL RG KP + L E+ LC A IF S+P +L+L+A
Sbjct: 4 DKKGEIDV--DNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEA 59
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
P+KI GD+HGQ+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K
Sbjct: 60 PLKICGDVHGQYFDLLRLFEYGGYPPES------NYLFLGDYVDRGKQSLETICLLLAYK 113
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEK 818
++YP N L+RGNHE A IN ++GF EC R I W FN LP+AALI++
Sbjct: 114 IKYPENFFLLRGNHECASINRIYGFYDECKRRY----TIKLWKTFTDCFNCLPVAALIDE 169
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
KI+CMHGG+ ++++EQI + RP + + L DLLWSDP ++ V+G N RG
Sbjct: 170 KILCMHGGLSPELSNLEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWADNERGVS 226
Query: 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
V F + V F ++L LI RAH+ V DG+E F++ L+TLFSA NYCG +NAG+++
Sbjct: 227 YV-FSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMM 285
Query: 939 VLGRDLVVVPKLIHP 953
+ L+ +++ P
Sbjct: 286 TIDESLMCSFQILKP 300
|
Length = 320 |
| >gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 1e-72
Identities = 103/245 (42%), Positives = 131/245 (53%), Gaps = 27/245 (11%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GD+HG DL+RL ++ G P +FLGDYVDRG S+E I LLLALK+
Sbjct: 2 VIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL- 54
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIE-----RMGERDGIWAWHRINRLFNWLPLAALI 816
P+NV L+RGNHE +N L+GF E R+ ++ G W N +F +LPLAALI
Sbjct: 55 PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALI 114
Query: 817 E-KKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875
E KK++C+HGG+ + EQI+ E DLLWSDP E G
Sbjct: 115 ETKKVLCVHGGLSPGLPLEEQIKEEPEDQLPE-------DLLWSDPLELPGGFGSSRRGG 167
Query: 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935
GP D V F N L+LIVR H V +G+E G+LIT+ S NYCG N
Sbjct: 168 GP-------DAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKL 220
Query: 936 AILVL 940
A LVL
Sbjct: 221 AALVL 225
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225 |
| >gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 3e-69
Identities = 113/293 (38%), Positives = 171/293 (58%), Gaps = 16/293 (5%)
Query: 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 705
S+ + +I +L +G + RQ + +I + IF S+P +L+++ P+++ GD
Sbjct: 2 SLVQTLIEKMLTVKGNRTQ--RQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGD 59
Query: 706 LHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765
HGQ+ DL+R+F++ G P Y +YLFLGDYVDRG+HS+ETITL K+ YP N
Sbjct: 60 THGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENF 113
Query: 766 HLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825
L+RGNHE A IN ++GF + + R I + +FN +P+ +I +KIICMHG
Sbjct: 114 FLLRGNHECASINKMYGF----FDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHG 169
Query: 826 GIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885
G+ + + + ++RP + I L DLLW+DP D V G + RG + FG D
Sbjct: 170 GLSPDLTSLASVNEIERPCDVPDRGI-LCDLLWADP--EDEVRGFLESDRGVSYL-FGED 225
Query: 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
V +F + D+ LIVRAH+ + G+ FA L+T+FSA NYCG +N A++
Sbjct: 226 IVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVM 278
|
Length = 294 |
| >gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 2e-67
Identities = 103/268 (38%), Positives = 144/268 (53%), Gaps = 25/268 (9%)
Query: 683 AERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD 742
I EP++L+++AP+ + GD+HGQF DL++LF+ GSP+ YLFLGDYVD
Sbjct: 28 GAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT------RYLFLGDYVD 81
Query: 743 RGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHR 802
RG S+E + L ALK+ YP + L+RGNHE + F F+ EC + ER +
Sbjct: 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDA 137
Query: 803 INRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM-DLLWSDP 861
F+ LPLAAL+ ++ +C+HGG+ + ++ I L R E + M DLLWSDP
Sbjct: 138 CMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDR--FREPPAFGPMCDLLWSDP 195
Query: 862 TENDSVEGLR----PNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE--RFA 914
E+ E + N RG + V EF N+L I+RAHE G+ R +
Sbjct: 196 LEDFGNEKTQEHFVHNTVRGCSYF-YSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKS 254
Query: 915 QG----HLITLFSATNYCGTANNAGAIL 938
Q LIT+FSA NY NN A+L
Sbjct: 255 QTTGFPSLITIFSAPNYLDVYNNKAAVL 282
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 305 |
| >gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 3e-67
Identities = 112/267 (41%), Positives = 161/267 (60%), Gaps = 15/267 (5%)
Query: 679 LCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
+C+ A+ IF E +V ++AP+ + GD+HGQF DL LF E GDI +Y+F+G
Sbjct: 24 ICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKE------GGDIPNANYIFIG 77
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG +S+ET+ LL LKV+YP N+ L+RGNHE+ ++GF E + + G +
Sbjct: 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSN--- 134
Query: 799 AWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLW 858
W +F+ LPLAALIE +I+C+HGG+ + ++QI + R I + DL+W
Sbjct: 135 PWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMW 193
Query: 859 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-FAQGH 917
SDP E VE N+RG G + FG EFC NDL LI RAH+ VM+G++ F +
Sbjct: 194 SDPEE---VEYWAVNSRGAGYL-FGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQN 249
Query: 918 LITLFSATNYCGTANNAGAILVLGRDL 944
L+T++SA NYC N +IL L +L
Sbjct: 250 LVTVWSAPNYCYRCGNIASILCLDENL 276
|
Length = 303 |
| >gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 2e-66
Identities = 104/275 (37%), Positives = 151/275 (54%), Gaps = 34/275 (12%)
Query: 683 AERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
+ + PS++++ P I + GD HGQF DL+ +F+ G PS YLF G
Sbjct: 41 VKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YLFNG 95
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG S+E I L A K+ YPN+ HL RGNHE ++N ++GF E + E
Sbjct: 96 DFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE----- 150
Query: 799 AWHRINRLF----NWLPLAALIEKKIICMHGGI----GRSINHVEQIENLQRPITMEAGS 850
++ LF NWLPLA LI K++ +HGG+ G +++ + +I+ ++P ++G
Sbjct: 151 ---QMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQP--PDSG- 204
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
++ +LLWSDP G P+ RG G FGPD F N+L+ I+R+HE +G+
Sbjct: 205 -LMCELLWSDPQPQP---GRSPSKRGVGC-QFGPDVTKRFLEENNLEYIIRSHEVKDEGY 259
Query: 911 ERFAQGHLITLFSATNYCGTANNAGA-ILVLGRDL 944
E G IT+FSA NYC N GA I + G DL
Sbjct: 260 EVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDL 294
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 316 |
| >gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 1e-50
Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 44/295 (14%)
Query: 683 AERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
A ++ P++ ++ + I GDLHG+ DL +F + G PS Y+F G
Sbjct: 32 ARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP-----YVFNG 86
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG+ S+E + +L A + YPN VHL RGNHE +N +GF E + + G
Sbjct: 87 DFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYK-LHGKK 145
Query: 799 AWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR---------------- 842
+ +F+WLPLA +I+ KI+ +HGGI S + ++ ++ + R
Sbjct: 146 ILRLLEDVFSWLPLATIIDNKILVVHGGISDSTD-LDLLDKIDRHKYVSVLRPPLRKGME 204
Query: 843 -----------PITMEAGSIVLMDLLWSDPTENDSVEGLRPNA-RGPGLVTFGPDRVMEF 890
P+ +L D+LWSDP +G +PN RG G FGPD +
Sbjct: 205 ELTGEEEDPSEPLDKTEWRQIL-DILWSDPKAQ---KGCKPNTFRGGG-CYFGPDVTSKV 259
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
+ L L++R+HEC +G+E +IT+FSA+NY +N GA + LG DL
Sbjct: 260 LQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 321 |
| >gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 4e-39
Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 66/334 (19%)
Query: 663 PPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL----KAPIKIFGDLHGQFGDLMRLFD 718
PP L N L +A +I EP+ +++ + + GD+HGQ D++ L +
Sbjct: 27 PPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86
Query: 719 EYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778
+ G P Y+F GDYVDRG LET LLL+ KV P+ V+L+RGNHE+
Sbjct: 87 DAGFPD-----QNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCT 141
Query: 779 ALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI------- 831
+++GF E + + G++ G + + F LPLA++I ++ HGG+ RS
Sbjct: 142 SMYGFEQEVLTKYGDK-GKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKK 200
Query: 832 ---NHVEQIENLQRPITMEAGSI--------------------VLMDLLWSDPTENDSVE 868
+ + +++ G++ + D+LWSDP+
Sbjct: 201 QKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTP--- 257
Query: 869 GLRPNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHE------------CVMDGF---ER 912
GL PN RG GL+ +GPD EF N+L+LI+R+HE + G+
Sbjct: 258 GLSPNKQRGIGLL-WGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHD 316
Query: 913 FAQGHLITLFSATNYCG------TANNAGAILVL 940
G LITLFSA +Y NN GA ++L
Sbjct: 317 VESGKLITLFSAPDYPQFQATEERYNNKGAYIIL 350
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 377 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-27
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 72/233 (30%)
Query: 699 PIKIFGDLHGQFGDL---MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLL 755
I + GDLHG DL + L + G P D+ LFLGD VDRG SLE + LL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPK--PDL----VLFLGDLVDRGPPSLEVLALLF 54
Query: 756 ALKVEYPNNVHLIRGNHEAADINALFGFRIECIER---------------------MGER 794
ALK++ P V+L+RGNH+ N+ GF +EC + +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLYGK 114
Query: 795 DGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM 854
G W L + L LAAL++ KI+ +HG + S++ + I
Sbjct: 115 GGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDI----------------- 157
Query: 855 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907
FG + + + +N + L++R H V
Sbjct: 158 -------------------------YLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 3e-12
Identities = 52/157 (33%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 777 INALFGFRIECIERMGERDGIWAWHR-INRLFNWLPLAALIE-KKIICMHGGIGRSINH- 833
+ AL+GF E R + W F+ LPLAA+ E K++C HGG+ ++
Sbjct: 3 LTALYGFYDEK-LRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRL 61
Query: 834 VEQIENLQRPITME-AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 892
++ IE L R E + DLLWSDP D P RG G D F
Sbjct: 62 LDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRR-IWNPGPRGVPR--DGGDVTAVFGI 118
Query: 893 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCG 929
+ +LI RAH G L+T FSA NYC
Sbjct: 119 VHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155
|
Length = 155 |
| >gnl|CDD|163665 cd07422, MPP_ApaH, Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 6e-10
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 702 IFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYL-FLGDYVDRGQHSLETITLLLALKV 759
GD+ G + +L RL ++ P+ D L +GD V+RG SLET+ + +L
Sbjct: 3 AIGDIQGCYDELQRLLEKINFDPAK-------DRLWLVGDLVNRGPDSLETLRFVKSLG- 54
Query: 760 EYPNNVHLIRGNHEAADINAL---FGFRIECIERMGERD---GIWAWHRINRLFNWL--- 810
++ + GNH D++ L G I++ ++D I + L +WL
Sbjct: 55 ---DSAKTVLGNH---DLHLLAVAAG-----IKKPKKKDTLDDILNAPDRDELLDWLRHQ 103
Query: 811 PLAALIEKKIICM-HGGI 827
PL + I M H GI
Sbjct: 104 PLLHRDPELGILMVHAGI 121
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathways in unknown. The PPP (phosphoprotein phosphatase) family, to which ApaH belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and PrpA/PrpB. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 4e-09
Identities = 75/285 (26%), Positives = 105/285 (36%), Gaps = 84/285 (29%)
Query: 82 IEKKEDGPGPRCGHTLTAVA----AVGEEGTPGY-IGPRLILFGGATALEGNSAASGTPS 136
+E+K +GPG RC H + V + G E TP I L +F T S A+G
Sbjct: 156 VEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVP 215
Query: 137 SAGSAGIRLA--GATADV-------------HCYDVLTNKWSRITPFGEPPTPRAAHVAT 181
G+R+ G+T V + +D TN+W +TP E PTPR+ H
Sbjct: 216 HLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMA 275
Query: 182 AVGTMVVIQGGI--------------------------------GPAGLSA--------- 200
A V + GG+ G AGL
Sbjct: 276 ADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVY 335
Query: 201 -------EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPL 253
+D+H D Q +W +V G P R A VG ++++ GG PL
Sbjct: 336 GFNGCEVDDVHYYDPVQD--KWTQVETFGVRPSERSVFASAAVG-KHIVIFGGEIAMDPL 392
Query: 254 ADV---------WALDTAAKPYEWRKLEPEG--EGPPPCMYATAS 287
A V +ALDT + +W +L+ G E P TAS
Sbjct: 393 AHVGPGQLTDGTFALDT--ETLQWERLDKFGEEEETPSSRGWTAS 435
|
Length = 470 |
| >gnl|CDD|163667 cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 6e-09
Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 26/103 (25%)
Query: 704 GDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYLF-LGDYVDRGQHSLETITLLLALKVEY 761
GD+HG + L + D G P D L +GD +DRG SL + LL
Sbjct: 7 GDIHGHYSLLQKALDAVGFDP-------ARDRLISVGDLIDRGPESLACLELL-----LE 54
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRIN 804
P H +RGNHE I+ + N
Sbjct: 55 P-WFHAVRGNHEQM-----------AIDALRAEPLDAVRWLAN 85
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 207 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 4e-08
Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 46/272 (16%)
Query: 169 GEPPTPRAAHVATAVGTMVVIQGG-IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
G+ P PR +H VG + GG + P +DL+V D W + G P
Sbjct: 17 GKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHT--WS--IAPANGDVP 72
Query: 228 R---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR---KLEPEGEGPPPC 281
R G M VG + L GG D KR +D ++ DT EW KL+ EG GP
Sbjct: 73 RISCLGVRMVAVGTK-LYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEG-GPEAR 128
Query: 282 MYATASARSDGLLLLCGGRDASSVPLAS------AYGLAKHRDGRWEWAIAPGVSPSPRY 335
+ + ++ + + + G + AY +A DG+W PG + R
Sbjct: 129 TFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIA---DGKWVQLPDPGENFEKRG 185
Query: 336 QHAAVFVNARLHVSGG----ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYS 391
V ++ V G L GG+ +S++V D A+G W + ++ P
Sbjct: 186 GAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKP------ 239
Query: 392 ADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ R A A VG I I+GG
Sbjct: 240 ------------SARSVFAHAVVGKYIIIFGG 259
|
Length = 341 |
| >gnl|CDD|234673 PRK00166, apaH, diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 5e-07
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 702 IFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYL-FLGDYVDRGQHSLETITLLLALKV 759
GD+ G + +L RL ++ P+ D L +GD V+RG SLE + + +L
Sbjct: 5 AIGDIQGCYDELQRLLEKIDFDPAK-------DTLWLVGDLVNRGPDSLEVLRFVKSLG- 56
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERD---GIWAWHRINRLFNWL---PLA 813
++ + GNH D++ L I+R ++D I + L +WL PL
Sbjct: 57 ---DSAVTVLGNH---DLHLLAVAA--GIKRNKKKDTLDPILEAPDRDELLDWLRHQPLL 108
Query: 814 A-LIEKKIICMHGGI 827
E ++ +H GI
Sbjct: 109 HVDEELGLVMVHAGI 123
|
Length = 275 |
| >gnl|CDD|107154 PHA02239, PHA02239, putative protein phosphatase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + D+HG++ L+ + D+ + + +FLGDYVDRG+ S + + + L
Sbjct: 3 IYVVPDIHGEYQKLLTIMDKINNERKPEETI----VFLGDYVDRGKRSKDVVNYIFDLMS 58
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
N V L+ GNH+ N +E ++R+ D W
Sbjct: 59 NDDNVVTLL-GNHDDEFYNI-----MENVDRLSIYDIEW 91
|
Length = 235 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-06
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ D+HG L + + + + D L LGD V G E + LAL +
Sbjct: 2 VISDIHGNLEALEAVLEAALAAAEKPDF----VLVLGDLVGDGPDPEEVLAAALALLLLL 57
Query: 762 PNNVHLIRGNHE 773
V+++ GNH+
Sbjct: 58 GIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 4e-06
Identities = 68/268 (25%), Positives = 98/268 (36%), Gaps = 33/268 (12%)
Query: 158 LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG-IGPAGLSAEDLHVLDLTQQRPRWH 216
L KW ++ GE P R +H VG + GG P + L+V DL + W
Sbjct: 149 LLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETR--TWS 206
Query: 217 RVVVQGPGPGPR-YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG 275
G P G M +G L GG D R ++ DT EW+ L P
Sbjct: 207 ISPATGDVPHLSCLGVRMVSIGST-LYVFGGRDASRQYNGFYSFDTTTN--EWKLLTPVE 263
Query: 276 EGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY 335
EGP P + + +A + + + G + + +Y + D +W PG S S R
Sbjct: 264 EGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIV---DKKWFHCSTPGDSFSIRG 320
Query: 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAA 395
V ++ V G G V+D V D W ++ P
Sbjct: 321 GAGLEVVQGKVWVVYGF--NGCEVDD---VHYYDPVQDKWTQVETFGVRP---------- 365
Query: 396 GGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ R A+AAVG I I+GG
Sbjct: 366 --------SERSVFASAAVGKHIVIFGG 385
|
Length = 470 |
| >gnl|CDD|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 33/145 (22%), Positives = 45/145 (31%), Gaps = 28/145 (19%)
Query: 703 FGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLF--LGDYVDRGQHSLETITLLLALKVE 760
GDLHG + G + LGD DRG +E + LL L+ E
Sbjct: 3 IGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQE 62
Query: 761 YP---NNVHLIRGNHEA-----------ADINALFGFRIECIERMGERDGIWAWHRINRL 806
VH + GNHE FG + G
Sbjct: 63 AAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELG------- 115
Query: 807 FNWL---PLAALIEKKIICMHGGIG 828
WL P+ + + +HGG+G
Sbjct: 116 -RWLRSKPVIVKVN-DTLFVHGGLG 138
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208 |
| >gnl|CDD|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 704 GDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763
GD+HG L L+ S D A +FLGDY DRG + + I L++L ++P
Sbjct: 8 GDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67
Query: 764 NVHL-IRGNHEAA 775
H+ + GNH+ A
Sbjct: 68 QRHVFLCGNHDFA 80
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 304 |
| >gnl|CDD|116261 pfam07646, Kelch_2, Kelch motif | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 2e-05
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 333 PRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381
PRY HA+V V +L+V GG+ G SS + VLD VW + ++
Sbjct: 1 PRYPHASVVVGGKLYVVGGS--TGLGDLSSSDLWVLDPETNVWTELPAL 47
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Drosophila ring canal kelch protein is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 48 |
| >gnl|CDD|163666 cd07423, MPP_PrpE, Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYID---YLFLGDYVDRGQHSLETITLL 754
P I GD+HG + +L L ++ G G + + + +F+GD VDRG S E + L+
Sbjct: 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLV 61
Query: 755 LALKVEYPNNVHLIRGNHE 773
+++ V + GNH+
Sbjct: 62 MSM-VA-AGAALCVPGNHD 78
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 234 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 4e-04
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 22/138 (15%)
Query: 83 EKKEDGPGPRCGHTLTAVA----AVGEEGTPG-YIGPRLILFGGATALEGNSAASGTPSS 137
+K GPGPRC H + V + G E P +I L +F T + A+G
Sbjct: 14 QKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPR 73
Query: 138 AGSAGIRLAG---------------ATADVHCYDVLTNKWSRITPFGEP--PTPRAAHVA 180
G+R+ +D + YD + N+W+ +T E P R H
Sbjct: 74 ISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSM 133
Query: 181 TAVGTMVVIQGGIGPAGL 198
+ V + GG+ GL
Sbjct: 134 ASDENHVYVFGGVSKGGL 151
|
Length = 341 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 5e-04
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273
PR G + ++G + IGG DG + L+ V D W KL
Sbjct: 1 PRSGAGVVVLGG-KIYVIGGYDGGQSLSSVEVYDPETN--TWSKLPS 44
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID--YLFLGDYVDRGQHSLETITLLLALKV 759
GD+HG L+ L + G +G + + +FLGD +DRG E + ++ ++ V
Sbjct: 3 FIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSM-V 61
Query: 760 EYPNNVHL-IRGNHEAADINAL 780
+ L + GNHE NA+
Sbjct: 62 D--AGHALAVMGNHE---FNAI 78
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 222 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.001
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 227 PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEP 273
PR H +G L GG + L+DVW D + W +L
Sbjct: 1 PRAYHTSTSIGDGRLYLFGGENEDGSVLSDVWVFDLSTN--TWTRLPS 46
|
Length = 49 |
| >gnl|CDD|234457 TIGR04075, bacter_Pnkp, polynucleotide kinase-phosphatase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.003
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDY---------LFLGDYVDRGQHSLE 749
P I GD+HG +L L +E G + +F+GD VDRG S
Sbjct: 181 PFDIIGDVHGCRDELETLLEELGYQIERDEGGRPVDVTHPEGRKAVFVGDLVDRGPDSPG 240
Query: 750 TITLLLALKVEYPNNVHLIRGNHEAADINALFG 782
+ L++ + V + GNH+ + AL G
Sbjct: 241 VLRLVMGM-VA-AGTALCVPGNHDVKLLRALRG 271
|
Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring [Transcription, RNA processing]. Length = 851 |
| >gnl|CDD|184187 PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 24/146 (16%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID---YLFLGDYVDRGQHSLETITLLLA 756
I GD+HG + + L ++ G ++G + D F+GD DRG HSL I ++
Sbjct: 3 YDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWE 62
Query: 757 LKVEYPNNVHLIRGNHEAADINALFGF--------------RIECIERMGERDGIWAWHR 802
L VE + + GNH N L+ F + E + +
Sbjct: 63 L-VEK-KAAYYVPGNH----CNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEK 116
Query: 803 INRLFNWLPL-AALIEKKIICMHGGI 827
L+ PL L E +++ H GI
Sbjct: 117 FITLYEQAPLYHILDEGRLVVAHAGI 142
|
Length = 245 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 999 | |||
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 100.0 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 100.0 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 100.0 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 100.0 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 100.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 100.0 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 100.0 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 100.0 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 100.0 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 100.0 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 100.0 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 100.0 | |
| KOG0375 | 517 | consensus Serine-threonine phosphatase 2B, catalyt | 100.0 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 100.0 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 100.0 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 100.0 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 99.98 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.98 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.97 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.97 | |
| PLN02153 | 341 | epithiospecifier protein | 99.97 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 99.97 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.97 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 99.97 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 99.97 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.96 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.96 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.96 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.95 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.94 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.93 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 99.93 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.93 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.93 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 99.93 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.88 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 99.87 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 99.83 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 99.83 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 99.83 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 99.82 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 99.81 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 99.8 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.79 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.78 | |
| PHA02239 | 235 | putative protein phosphatase | 99.76 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.72 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.7 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.51 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.43 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.24 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 98.97 | |
| COG0639 | 155 | ApaH Diadenosine tetraphosphatase and related seri | 98.81 | |
| PLN02772 | 398 | guanylate kinase | 98.75 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.71 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.71 | |
| PLN02772 | 398 | guanylate kinase | 98.7 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.64 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.61 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.56 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.5 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.45 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.45 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.44 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.42 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.42 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.35 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.33 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 98.33 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.31 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.3 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.26 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.26 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.2 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.18 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 98.04 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 97.95 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.95 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 97.94 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.92 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 97.88 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.8 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.77 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 97.7 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 97.67 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 97.59 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 97.49 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 97.45 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 97.43 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 97.42 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 97.37 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 97.31 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 97.11 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.08 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.04 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.03 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 96.97 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.92 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 96.88 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.81 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 96.78 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 96.77 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 96.74 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 96.7 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.64 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.47 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.45 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 96.44 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 96.4 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 96.36 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 96.3 | |
| KOG0918 | 476 | consensus Selenium-binding protein [Inorganic ion | 96.23 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 96.16 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 96.14 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 96.12 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.1 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 95.99 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 95.98 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 95.93 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 95.9 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 95.81 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 95.57 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 95.57 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 95.39 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 95.38 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 95.09 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 94.99 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 94.97 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 94.93 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 94.75 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 94.59 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 94.49 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.48 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 94.27 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 93.88 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 93.84 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 93.62 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 93.19 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 93.05 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 92.56 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 91.66 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 91.02 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 90.94 | |
| PLN02533 | 427 | probable purple acid phosphatase | 90.79 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 89.41 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 89.25 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 88.94 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 87.46 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 86.72 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 86.01 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 85.94 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 84.89 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 84.83 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 84.36 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 83.53 | |
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 83.39 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 83.32 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 82.68 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 82.61 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 82.39 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 82.1 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 82.04 | |
| cd00094 | 194 | HX Hemopexin-like repeats.; Hemopexin is a heme-bi | 81.07 |
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-78 Score=609.19 Aligned_cols=284 Identities=41% Similarity=0.734 Sum_probs=271.7
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
+++.|+.|.+.. .+.+.++..||.++.+||.+|++|++++.|++|||||||||+||+.+|+..|-++..
T Consensus 3 ldr~ie~L~~~~----------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t- 71 (303)
T KOG0372|consen 3 LDRQIEQLRRCE----------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPET- 71 (303)
T ss_pred HHHHHHHHHhcC----------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCC-
Confidence 578899997753 678999999999999999999999999999999999999999999999999988876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||.+|+|++.||++||++||++|+|||||||++.++..|||++||.+|||. ..+|+.+.++|
T Consensus 72 -----~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~---~~vWr~c~eiF 143 (303)
T KOG0372|consen 72 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS---ANVWRYCTEIF 143 (303)
T ss_pred -----ceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCC---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999995 47999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||++|+|+++|||||||++|.+.++++|+.+.|..+++.++ .++|||||||.+ ..||..++||+| +.||.+++
T Consensus 144 dyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g-~m~DllWSDPee---~~g~~~SPRGaG-ylFG~dvv 218 (303)
T KOG0372|consen 144 DYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDG-AMCDLLWSDPEE---GPGWGLSPRGAG-YLFGEDVV 218 (303)
T ss_pred HhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCC-cchheeccCccc---CCCcccCCCCcc-ccccHHHH
Confidence 9999999999999999999999999999999999999999877 899999999997 369999999999 78999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 955 (999)
++||+.||+++|+|+||.|++||++.++++|+|||||||||++++|.||||.++++..-.|++|...+
T Consensus 219 ~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~ 286 (303)
T KOG0372|consen 219 ESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAP 286 (303)
T ss_pred HHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999997654
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-72 Score=619.50 Aligned_cols=295 Identities=51% Similarity=0.892 Sum_probs=275.8
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhC-CCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYG-SPSTA 726 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g-~~~~~ 726 (999)
++++|..++..............|+.+||.+||..+.++|..+|+++++++||+|||||||||.||+++|+..| +|+..
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~ 88 (331)
T KOG0374|consen 9 LDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQ 88 (331)
T ss_pred HHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcc
Confidence 56677777765443333333455899999999999999999999999999999999999999999999999999 88766
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhh
Q 001895 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (999)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (999)
+|||||||||||++|+|||.||+++|++||++||+||||||++.+|..|||++||.+||++ ..+|+.|+++
T Consensus 89 ------~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~ 159 (331)
T KOG0374|consen 89 ------NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDA 159 (331)
T ss_pred ------cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999975 4799999999
Q ss_pred hcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHH
Q 001895 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (999)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (999)
|++||++|+|+++|+|+||||+|.+.++++|+.|.||.++++.+ +++|||||||+. .+.||.+|.||.+ +.||+++
T Consensus 160 f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~g-ll~DLlWsdp~~--~~~g~~~n~Rg~s-~~fg~~~ 235 (331)
T KOG0374|consen 160 FNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKG-LLCDLLWSDPDD--DVPGWEENDRGVS-FTFGPAV 235 (331)
T ss_pred HhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccc-eeeeeeecCCCC--CCCCcccCCCcee-eEecHHH
Confidence 99999999999999999999999999999999999998888766 999999999986 4789999999999 7999999
Q ss_pred HHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCC
Q 001895 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (999)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 955 (999)
+++||+++++++||||||+|+||||+|+++++|||||||+|||.++|+||+|.|++++.+.+++++|..
T Consensus 236 v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 236 VEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred HHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999954
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=550.36 Aligned_cols=286 Identities=37% Similarity=0.707 Sum_probs=269.6
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
.|+.|+..-+. ..|+++|+..||+.++++|..|.++..++.|+.|+|||||||.||+++|+..|-.+..
T Consensus 6 ~d~wi~~vk~c----------kyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t- 74 (306)
T KOG0373|consen 6 LDQWIETVKKC----------KYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT- 74 (306)
T ss_pred HHHHHHHHHHc----------CCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCc-
Confidence 45566665443 2689999999999999999999999999999999999999999999999998877655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||+|||||||.+|+|++.+|+.||.+||.+|.|||||||.+.+...|||++||..|||.. ..|+.+.++|
T Consensus 75 -----nYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVF 146 (306)
T KOG0373|consen 75 -----NYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVF 146 (306)
T ss_pred -----ceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999975 7999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
+.|+++|+|+++|||||||++|.+.++++|+-|.|-.++|.++ .++||+||||++ ++.|.-++||+| +.||.+++
T Consensus 147 D~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G-~fcDlmWSDPed---ve~W~vSpRGAG-wlFGskVt 221 (306)
T KOG0373|consen 147 DFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEG-PFCDLMWSDPED---VETWAVSPRGAG-WLFGSKVT 221 (306)
T ss_pred hhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCC-CccceeccChhh---hhhheeCCCCcc-eeechhhh
Confidence 9999999999999999999999999999999999999999887 899999999985 788999999999 57999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCe-EEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGH-LITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~-~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (999)
.+|+..|+|++|+|+||.|++||++++++| |+|||||||||++++|.|+||.++++++-++|+|..+|..
T Consensus 222 ~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 222 TEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 999999999999999999999999999888 9999999999999999999999999999999999877654
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=586.88 Aligned_cols=294 Identities=46% Similarity=0.835 Sum_probs=275.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|+.+++.+.+++. ....|++++|.+||++|+++|++||+++++..|++|||||||||.+|+++|+..++++..
T Consensus 11 ~~~~i~~~~~~~~~~~~--~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~- 87 (320)
T PTZ00480 11 VDNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES- 87 (320)
T ss_pred HHHHHHHHHhccccCcc--ccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc-
Confidence 78899999987766542 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++++||+.+|++||+.||.+|++||||||.+.++..|||..||..+|+ ..+|..++++|
T Consensus 88 -----~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~----~~l~~~~~~~F 158 (320)
T PTZ00480 88 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT----IKLWKTFTDCF 158 (320)
T ss_pred -----eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 36999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+||+|+++||||||||+|.+.++++|+.+.||.+.+..+ +++|+|||||.+ ...+|.+|.||.| +.||++++
T Consensus 159 ~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWSDP~~--~~~~~~~s~RG~g-~~FG~~~~ 234 (320)
T PTZ00480 159 NCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTG-LLCDLLWSDPDK--DVQGWADNERGVS-YVFSQEIV 234 (320)
T ss_pred HhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccc-hhhheeecCccc--ccCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887654 899999999986 3578999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (999)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++.+.++.|.|.+..
T Consensus 235 ~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 235 QVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred HHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999876554
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-68 Score=584.32 Aligned_cols=286 Identities=33% Similarity=0.604 Sum_probs=256.6
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecC----CeEEEecCCCCHHHHHHHHHHhC
Q 001895 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYG 721 (999)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~----~i~vvGDiHG~~~~L~~il~~~g 721 (999)
+.++++|+.|++.. .|+++++.+||++|+++|++||+|+++.. |++|||||||||.+|+++|+..|
T Consensus 5 ~~~~~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g 74 (321)
T cd07420 5 DHIDALIEAFKEKQ----------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNG 74 (321)
T ss_pred HHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcC
Confidence 34788999998642 47899999999999999999999999986 89999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhh
Q 001895 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (999)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (999)
+++... +|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||++||..+|+.. ...+|.
T Consensus 75 ~~~~~~-----~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~ 148 (321)
T cd07420 75 LPSPEN-----PYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILR 148 (321)
T ss_pred CCCccc-----eEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHH
Confidence 886432 79999999999999999999999999999999999999999999999999999999999863 567999
Q ss_pred hhhhhhcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCccc-----CC---------------------CCceeee
Q 001895 802 RINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-----EA---------------------GSIVLMD 855 (999)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~-----~~---------------------~~~~~~d 855 (999)
.++++|++||+||+|+++||||||||++ ..++++|+.++|+... +. ...++.|
T Consensus 149 ~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 227 (321)
T cd07420 149 LLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILD 227 (321)
T ss_pred HHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhhe
Confidence 9999999999999999999999999997 5789999999885211 11 0136789
Q ss_pred cccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeE
Q 001895 856 LLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935 (999)
Q Consensus 856 llWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~g 935 (999)
+|||||.+. ...|.++.||.| +.||++++++||++||+++||||||++++||+++++++|||||||+|||+..+|+|
T Consensus 228 lLWSDP~~~--~~~~~~~~RG~g-~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~g 304 (321)
T cd07420 228 ILWSDPKAQ--KGCKPNTFRGGG-CYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRG 304 (321)
T ss_pred eeecCCccC--CCCCccCCCCCc-cccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccE
Confidence 999999853 233666789999 68999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCceEEeEEe
Q 001895 936 AILVLGRDLVVVPKLI 951 (999)
Q Consensus 936 a~l~~~~~~~~~~~~~ 951 (999)
|+|.|++++.+.+..+
T Consensus 305 avl~i~~~~~~~f~~~ 320 (321)
T cd07420 305 AYIKLGPDLTPHFVQY 320 (321)
T ss_pred EEEEECCCCceeEEEe
Confidence 9999999988877655
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=583.67 Aligned_cols=303 Identities=79% Similarity=1.341 Sum_probs=279.2
Q ss_pred HHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCC--CC
Q 001895 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA--GD 728 (999)
Q Consensus 651 ~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~--~~ 728 (999)
+|.+||+|+.|+.+...++.|+++++.+||++|+++|++||+++++..|++|||||||||.+|.++|+.+|+++.. ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4788999999999888888999999999999999999999999999999999999999999999999999988641 12
Q ss_pred ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCc--cchhhhhhhhhh
Q 001895 729 IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGER--DGIWAWHRINRL 806 (999)
Q Consensus 729 ~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~--~~~~~~~~~~~~ 806 (999)
....+|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. ....+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 222379999999999999999999999999999999999999999999999999999999999862 335799999999
Q ss_pred hcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCC---CCCCc-eee
Q 001895 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNA---RGPGL-VTF 882 (999)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~---rg~~~-~~f 882 (999)
|++||+++++++++|||||||+|.+.++++|+.+.||...+....+++|+|||||.+.+...+|.++. ||.|. +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998544444589999999999765567888876 99995 799
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEecc
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 953 (999)
|++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|++++++.+.+++|+|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-67 Score=570.18 Aligned_cols=283 Identities=43% Similarity=0.772 Sum_probs=266.8
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|+++++.. .|+.+++.+||++|+++|++||+++++..|++|||||||||.+|+++|+..++++..
T Consensus 2 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~- 70 (285)
T cd07415 2 LDKWIEQLKKCE----------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDT- 70 (285)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCC-
Confidence 467888887632 478999999999999999999999999999999999999999999999999987765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++++||+.+|++||+.+|.+|++||||||.+.++..|||.+||..+|+. ..+|..++++|
T Consensus 71 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f 142 (285)
T cd07415 71 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLF 142 (285)
T ss_pred -----eEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999975 36999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||++|++++++|||||||+|.+.++++|++++||.+++..+ ++.|+|||||.+. .+|.+|.||.| +.||++++
T Consensus 143 ~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~~---~~~~~~~Rg~g-~~fg~~~~ 217 (285)
T cd07415 143 DYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEG-PMCDLLWSDPDDI---EGWGISPRGAG-YLFGQDVV 217 (285)
T ss_pred HHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCC-CccceEecCCCcc---CCCCcCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887654 7899999999863 68999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (999)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++++.++.|.|.
T Consensus 218 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 284 (285)
T cd07415 218 EEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAA 284 (285)
T ss_pred HHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999988765
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-67 Score=572.81 Aligned_cols=291 Identities=38% Similarity=0.750 Sum_probs=270.1
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCC
Q 001895 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST 725 (999)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~ 725 (999)
++++++|..+++...+.. .....++.++|.+||++|+++|++||+++++..|++|||||||||.+|+++|+.+++++.
T Consensus 2 ~~~~~~i~~~~~~~~~~~--~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~ 79 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRT--QRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPY 79 (294)
T ss_pred chHHHHHHHHHhcccCCC--ccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCc
Confidence 356888888888654432 234468999999999999999999999999999999999999999999999999999876
Q ss_pred CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhh
Q 001895 726 AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR 805 (999)
Q Consensus 726 ~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~ 805 (999)
+ +|||||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+||..+|+ ..+|..+++
T Consensus 80 ~------~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~ 149 (294)
T PTZ00244 80 S------NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN----IKLFKAFTD 149 (294)
T ss_pred c------cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh----HHHHHHHHH
Confidence 5 899999999999999999999999999999999999999999999999999999999996 359999999
Q ss_pred hhcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHH
Q 001895 806 LFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885 (999)
Q Consensus 806 ~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~ 885 (999)
+|++||++|++++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||.+ ...+|.+|.||.| +.||++
T Consensus 150 ~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~ 225 (294)
T PTZ00244 150 VFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRG-ILCDLLWADPED--EVRGFLESDRGVS-YLFGED 225 (294)
T ss_pred HHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccc-hhheeeecCccc--ccCCCCcCCCCCc-cccCHH
Confidence 999999999999999999999999999999999999999887654 899999999985 3578999999999 689999
Q ss_pred HHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEec
Q 001895 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 952 (999)
Q Consensus 886 ~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~ 952 (999)
++++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++.|.
T Consensus 226 ~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~ 292 (294)
T PTZ00244 226 IVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIP 292 (294)
T ss_pred HHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEee
Confidence 9999999999999999999999999999999999999999999999999999999999999988764
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-67 Score=572.78 Aligned_cols=290 Identities=49% Similarity=0.869 Sum_probs=270.4
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|+.+++.+.++. .....|+++++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..++++.+
T Consensus 2 ~~~~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~- 78 (293)
T cd07414 2 IDSIIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 78 (293)
T ss_pred HHHHHHHHHhccccCC--cccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcc-
Confidence 4678888887665543 2344689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++++||+.+|++||+.||.++++||||||.+.++..|||..||..+|+ ..+|..++++|
T Consensus 79 -----~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~~f 149 (293)
T cd07414 79 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 149 (293)
T ss_pred -----eEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999985 46999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||++|++++++|||||||+|.+.++++|+.++||.+++..+ ++.|+|||||.. ...+|.+|.||.| +.||++++
T Consensus 150 ~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~ 225 (293)
T cd07414 150 NCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGKDVV 225 (293)
T ss_pred HHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchh-hHhhhhccCccc--ccCCCccCCCCcc-eecCHHHH
Confidence 9999999999999999999999999999999999999877654 899999999986 3578999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEecc
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 953 (999)
++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++.|.|
T Consensus 226 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~ 291 (293)
T cd07414 226 AKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 291 (293)
T ss_pred HHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999998875
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-66 Score=569.80 Aligned_cols=286 Identities=41% Similarity=0.749 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|+.+++.. .|+++++.+||++|+++|++||+++++..|++|||||||||.+|+++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~- 71 (303)
T PTZ00239 3 IDRHIATLLNGG----------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNA- 71 (303)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 577888887632 478999999999999999999999999999999999999999999999999987655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++++||+.+|++||+.||.+|++||||||.+.++..|||.+||..+|+.. .+|+.++++|
T Consensus 72 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f 143 (303)
T PTZ00239 72 -----NYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVF 143 (303)
T ss_pred -----eEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||++|+|++++|||||||+|.+.++++|+.++||.+++..+ +++|+|||||.+ ..+|.+|.||.| +.||++++
T Consensus 144 ~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~Rg~g-~~fg~~~~ 218 (303)
T PTZ00239 144 DCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMWSDPEE---VEYWAVNSRGAG-YLFGAKVT 218 (303)
T ss_pred HhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCC-CceeeEecCccc---cCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999987655 789999999985 468999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecC-CeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQ-GHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~-~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (999)
++||++||+++||||||++++||+++++ ++|||||||||||+..+|+||+|.+++++.+.++.|.|.+..
T Consensus 219 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 219 KEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred HHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 9999999999999999999999998665 559999999999999999999999999999999999887653
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=565.63 Aligned_cols=291 Identities=35% Similarity=0.639 Sum_probs=268.3
Q ss_pred CChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHH
Q 001895 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDE 719 (999)
Q Consensus 644 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~L~~il~~ 719 (999)
+.++++++|+.+++.+ .|+.+++.+||++|.++|++||+++++..| ++|||||||||.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~ 81 (316)
T cd07417 12 TLEFVKEMIEWFKDQK----------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFEL 81 (316)
T ss_pred CHHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHh
Confidence 4577899999997742 478899999999999999999999999866 99999999999999999999
Q ss_pred hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhh
Q 001895 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWA 799 (999)
Q Consensus 720 ~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~ 799 (999)
.|+++..+ +|||||||||||++|+|||.+|++||+.+|++|++||||||.+.++..|||..||..+|+. .+
T Consensus 82 ~g~~~~~~-----~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~----~l 152 (316)
T cd07417 82 NGLPSETN-----PYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE----QM 152 (316)
T ss_pred cCCCCccC-----eEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccH----HH
Confidence 99876542 7999999999999999999999999999999999999999999999999999999999864 58
Q ss_pred hhhhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCC
Q 001895 800 WHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878 (999)
Q Consensus 800 ~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~ 878 (999)
|..++++|++||+++++++++||||||| ++...++++|++++||.+.+..+ +++|+|||||.+. .+|.+|.||.|
T Consensus 153 ~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~---~~~~~s~Rg~g 228 (316)
T cd07417 153 FDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSG-LMCELLWSDPQPQ---PGRSPSKRGVG 228 (316)
T ss_pred HHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccc-cceeeeecCCCCC---CCCCccCCCCc
Confidence 9999999999999999999999999999 56788999999999998776544 8999999999863 58999999999
Q ss_pred ceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcC-CceEEeEEeccCCCC
Q 001895 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-DLVVVPKLIHPLPPA 957 (999)
Q Consensus 879 ~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~-~~~~~~~~~~~~~~~ 957 (999)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++ ++.+.++.|.+.+..
T Consensus 229 -~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 229 -CQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred -eEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 689999999999999999999999999999999999999999999999999999999999999 899999999877654
Q ss_pred C
Q 001895 958 I 958 (999)
Q Consensus 958 ~ 958 (999)
.
T Consensus 308 ~ 308 (316)
T cd07417 308 N 308 (316)
T ss_pred C
Confidence 4
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=558.94 Aligned_cols=288 Identities=35% Similarity=0.623 Sum_probs=262.0
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++-+++++++.. .|+++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~- 71 (305)
T cd07416 3 IDVLKAHFMREG----------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT- 71 (305)
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 345667776532 478999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+||+.+|++||+.||.+|++||||||.+.++..|||..||..+|+ ..+|..++++|
T Consensus 72 -----~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f 142 (305)
T cd07416 72 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMEAF 142 (305)
T ss_pred -----eEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999985 45899999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCC----CCCccC-CCCCCceee
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSV----EGLRPN-ARGPGLVTF 882 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~----~~~~~n-~rg~~~~~f 882 (999)
++||+++++++++|||||||+|.+.++++|++++||.+.+..+ +++|+|||||.+.+.. .+|.+| .||.| +.|
T Consensus 143 ~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g-~~f 220 (305)
T cd07416 143 DCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFG-PMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCS-YFY 220 (305)
T ss_pred hhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCC-cceeeeecCcccccccccccccccccCCCCCc-eec
Confidence 9999999999999999999999999999999999998877654 8899999999764321 258776 89999 789
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
|++++++||++||+++||||||++++||++++++ +||||||||||||..+|+||+|.++++. +.++.+.+.|.
T Consensus 221 G~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 221 SYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 9999999999999999999999999999998886 9999999999999999999999999985 68888877665
Q ss_pred CC
Q 001895 957 AI 958 (999)
Q Consensus 957 ~~ 958 (999)
.+
T Consensus 300 ~~ 301 (305)
T cd07416 300 PY 301 (305)
T ss_pred CC
Confidence 43
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-64 Score=549.58 Aligned_cols=269 Identities=47% Similarity=0.903 Sum_probs=255.0
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHH
Q 001895 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET 750 (999)
Q Consensus 671 l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev 750 (999)
++++++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..+.++.. +|||||||||||++++||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~------~~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDT------NYVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCc------eEEEeCCccCCCCChHHH
Confidence 35789999999999999999999999999999999999999999999999987665 899999999999999999
Q ss_pred HHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCccCc
Q 001895 751 ITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830 (999)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~ 830 (999)
+.+|++||+.+|.+|++||||||.+.++..|||..||..+|+. .+|+.++++|++||++|++++++|||||||+|.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~ 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCCc
Confidence 9999999999999999999999999999999999999999963 699999999999999999999999999999999
Q ss_pred ccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccce
Q 001895 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910 (999)
Q Consensus 831 ~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~ 910 (999)
+.++++|++++||.+.+... ++.|+|||||.. ...+|.+|.||.| +.||++++++||++||+++||||||++++||
T Consensus 151 ~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 226 (271)
T smart00156 151 LTTLDDIRKLKRPQEPPDEG-LLIDLLWSDPDQ--PVDGFQPSIRGAS-YYFGPDAVDEFLKKNNLKLIIRAHQVVDDGY 226 (271)
T ss_pred cCCHHHHhcccCCCCCCchh-hhhheeecCCCc--ccCCCccCCCCCc-cccCHHHHHHHHHHCCCeEEEecCcccCCcE
Confidence 99999999999998876544 899999999974 3578999999999 6899999999999999999999999999999
Q ss_pred EEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEecc
Q 001895 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (999)
Q Consensus 911 ~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 953 (999)
+++++++|||||||+|||+..+|+||+|.+++++.+.++.+.|
T Consensus 227 ~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~ 269 (271)
T smart00156 227 EFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKP 269 (271)
T ss_pred EEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999988865
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-62 Score=546.34 Aligned_cols=299 Identities=33% Similarity=0.578 Sum_probs=258.4
Q ss_pred CChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCeEEEecCCCCHHHHHHHHHH
Q 001895 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDE 719 (999)
Q Consensus 644 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~----~~i~vvGDiHG~~~~L~~il~~ 719 (999)
+.+.++.||+.+.....--++......|+.++|.+||++|+++|++||+++++. .|++||||||||+.+|+++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 345678888887543211123333456899999999999999999999999998 8999999999999999999999
Q ss_pred hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhh
Q 001895 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWA 799 (999)
Q Consensus 720 ~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~ 799 (999)
.|+++.+. +|||||||||||++|+|||.+|++||+.||.+|++||||||.+.++..|||..||..+|+.. +..+
T Consensus 88 ~g~~~~~~-----~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~~~l 161 (377)
T cd07418 88 AGFPDQNR-----FYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-GKHV 161 (377)
T ss_pred hCCCCCCc-----eEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-HHHH
Confidence 99886542 69999999999999999999999999999999999999999999999999999999999864 4579
Q ss_pred hhhhhhhhcccceeEEEcCcEEEecCCc---------------------------cCcccCHHHhhhccCCc-ccCCCC-
Q 001895 800 WHRINRLFNWLPLAALIEKKIICMHGGI---------------------------GRSINHVEQIENLQRPI-TMEAGS- 850 (999)
Q Consensus 800 ~~~~~~~f~~LPlaa~i~~~il~vHgGi---------------------------~~~~~~~~~i~~i~rp~-~~~~~~- 850 (999)
|+.++++|++||++++|++++||||||| ++.+.++++|+.++||. +++..+
T Consensus 162 ~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~ 241 (377)
T cd07418 162 YRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGS 241 (377)
T ss_pred HHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCc
Confidence 9999999999999999999999999999 34567999999999985 444332
Q ss_pred -ceeeecccCCCCCCCCCCCCccC-CCCCCceeeCHHHHHHHHHHcCCcEEEEeccc------------cccceEEecC-
Q 001895 851 -IVLMDLLWSDPTENDSVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC------------VMDGFERFAQ- 915 (999)
Q Consensus 851 -~~~~dllWsDP~~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~------------~~~G~~~~~~- 915 (999)
.+++|||||||.. ..+|.+| .||.| +.||++++++||++||+++||||||| |++||+++++
T Consensus 242 ~~i~~dlLWSDP~~---~~g~~~~~~RG~g-~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~ 317 (377)
T cd07418 242 NLIPGDVLWSDPSL---TPGLSPNKQRGIG-LLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDV 317 (377)
T ss_pred cccceeeEeeCCcc---CCCCCccCCCCCc-cccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccC
Confidence 2578999999986 3578777 79999 68999999999999999999999996 7899999887
Q ss_pred --CeEEEEecccccC------CCCCCeEEEEEEcCCc--eEEeEEec
Q 001895 916 --GHLITLFSATNYC------GTANNAGAILVLGRDL--VVVPKLIH 952 (999)
Q Consensus 916 --~~~iTvFSa~~y~------~~~~n~ga~l~~~~~~--~~~~~~~~ 952 (999)
++|||||||+||| +..+|+||+++++.+- ...++.|.
T Consensus 318 ~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~ 364 (377)
T cd07418 318 ESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFE 364 (377)
T ss_pred CCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEee
Confidence 9999999999999 5789999999997643 44555554
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-62 Score=515.88 Aligned_cols=274 Identities=37% Similarity=0.652 Sum_probs=250.6
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHH
Q 001895 670 FLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLE 749 (999)
Q Consensus 670 ~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~e 749 (999)
.|+++..+.|+.++..+|++|++++++++||.|||||||||.||+++|+..|.|... +|||||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t------~YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT------RYLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccc------eeEeeccccccceeeee
Confidence 478999999999999999999999999999999999999999999999998887765 99999999999999999
Q ss_pred HHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCccC
Q 001895 750 TITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829 (999)
Q Consensus 750 vl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~ 829 (999)
|+.+|.+||+.||..++|||||||++.+...|.|+.||..||.+ .+|+++++.|+.|||||+.++.+|||||||+|
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse----~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccH----HHHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 99999999999999999999999999999999999999999965 69999999999999999999999999999999
Q ss_pred cccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC----CCCCccC-CCCCCceeeCHHHHHHHHHHcCCcEEEEecc
Q 001895 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHE 904 (999)
Q Consensus 830 ~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~----~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~ 904 (999)
.+.+++||+++.|..++|..+ .+||||||||.++.. .+.|.+| .||++ |.|.-.++.+||+.|||--|||+||
T Consensus 210 Ei~tl~DIr~l~RF~EpPa~G-pmCDLLWsDPlEdfgnek~~e~f~hNsvRGCS-yfysy~A~C~FLq~nnLLSIiRAHE 287 (517)
T KOG0375|consen 210 EIHTLDDIRKLDRFKEPPAFG-PMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCS-YFYSYPAVCEFLQNNNLLSIIRAHE 287 (517)
T ss_pred ccccHHHHHhhhhccCCCccC-cchhhhccChhhhccccccccccccCcccccc-ceechHHHHHHHHhCCchhhhhhhh
Confidence 999999999999999999877 899999999987421 2456666 79999 7899999999999999999999999
Q ss_pred ccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 905 CVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 905 ~~~~G~~~~~~~------~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
.++.||.++-+. .||||||||||.+.++|+||||..+++. +...+|.-.|.
T Consensus 288 AQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncSPH 344 (517)
T KOG0375|consen 288 AQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 344 (517)
T ss_pred hhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCCCC
Confidence 999999987665 5899999999999999999999987763 33445544333
|
|
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-62 Score=495.73 Aligned_cols=286 Identities=40% Similarity=0.706 Sum_probs=268.1
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++.-|..|.+.+ .+++.++..||+.|+++|.+|.+|..++.|++||||+||||+||+++|+..|..+..
T Consensus 20 vd~~ie~L~~ck----------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdt- 88 (319)
T KOG0371|consen 20 VDPWIEQLYKCK----------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDT- 88 (319)
T ss_pred cccchHHHHhcC----------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCc-
Confidence 455666665543 578899999999999999999999999999999999999999999999887776654
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|+|+|||||||++|.|++.+|.++|++||++|.+||||||.+.|...|||++||.+|||.. .+|+.|.+.|
T Consensus 89 -----nylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlf 160 (319)
T KOG0371|consen 89 -----NYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 160 (319)
T ss_pred -----ceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999975 7999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
+++|+.|+|+++|||+|||++|++.+++.++.+.|-.+++.++ .++|||||||++ .-||..++||+| +.||.+..
T Consensus 161 dy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evpheg-pmcDlLwsdpdd---r~gwg~sprgag-~tfg~di~ 235 (319)
T KOG0371|consen 161 DYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEG-PMCDLLWSDPDD---RCGWGISPRGAG-YTFGQDIS 235 (319)
T ss_pred hccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCC-ChhheeccCccc---CCCCCCCCCCCC-cccchhhH
Confidence 9999999999999999999999999999999999988888876 688999999985 579999999999 79999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (999)
++|-.+||+++|-|+||.+++||.+.+...++|||||+|||+.++|.+|++.+++.....+..|.|.+-.
T Consensus 236 ~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 236 EQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred HHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986543
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-53 Score=453.30 Aligned_cols=277 Identities=33% Similarity=0.653 Sum_probs=246.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCeEEEecCCCCHHHHHHHHHHhCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSP 723 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~----~~i~vvGDiHG~~~~L~~il~~~g~~ 723 (999)
++.+|+.+-.. ..|....+..|+.+|+++|++-|++-+++ ..|.||||+||.++||+-||-+.|+|
T Consensus 121 i~~lieaFk~k----------q~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 121 IDLLIEAFKKK----------QRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred HHHHHHHHHHh----------hhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 56677765321 25778889999999999999999999985 46999999999999999999999999
Q ss_pred CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhh
Q 001895 724 STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRI 803 (999)
Q Consensus 724 ~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~ 803 (999)
+..+ -|||.||+||||.+|+|||++|++|.+.||..|||-|||||+..+|..|||..|+..||... +..+...+
T Consensus 191 S~~n-----pYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~-~k~Ilr~l 264 (631)
T KOG0377|consen 191 SSSN-----PYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRH-GKRILRFL 264 (631)
T ss_pred CCCC-----CeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhc-ccHHHHHH
Confidence 9875 79999999999999999999999999999999999999999999999999999999999765 77888999
Q ss_pred hhhhcccceeEEEcCcEEEecCCccCcccCHHHhhhccC---------Cccc--CC----------CCceeeecccCCCC
Q 001895 804 NRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR---------PITM--EA----------GSIVLMDLLWSDPT 862 (999)
Q Consensus 804 ~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~r---------p~~~--~~----------~~~~~~dllWsDP~ 862 (999)
.++|.|||++.+|+.+||+|||||+.. ++++-|.+|+| |.+. +. ++..+.|+|||||.
T Consensus 265 eevy~WLPi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~ 343 (631)
T KOG0377|consen 265 EEVYRWLPIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQ 343 (631)
T ss_pred HHHHHhcchhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcc
Confidence 999999999999999999999999875 67777777766 2211 00 23457899999998
Q ss_pred CCCCCCCCccC-CCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEc
Q 001895 863 ENDSVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG 941 (999)
Q Consensus 863 ~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~ 941 (999)
.+ .|..|| .||.| ++||+|++.+||++++|+++||+|||.++|||+.++++|+|||||+||.....|+||++.+.
T Consensus 344 ~~---~GC~pNt~RGgG-~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~ 419 (631)
T KOG0377|consen 344 AT---MGCVPNTLRGGG-CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLG 419 (631)
T ss_pred cc---cCCCcccccCCc-ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeC
Confidence 63 677788 79999 57999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCce
Q 001895 942 RDLV 945 (999)
Q Consensus 942 ~~~~ 945 (999)
+.++
T Consensus 420 ~~~~ 423 (631)
T KOG0377|consen 420 NQLT 423 (631)
T ss_pred CCCC
Confidence 8764
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=415.68 Aligned_cols=274 Identities=39% Similarity=0.675 Sum_probs=251.0
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC
Q 001895 671 LDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH 746 (999)
Q Consensus 671 l~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~ 746 (999)
|...-...|+..+..+++++|+++++..| +.|+||+||||.||+++|+..|.|+... .|+|.||+||||..
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~-----~ylfngdfv~rgs~ 257 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN-----PYLFNGDFVDRGSW 257 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc-----cccccCceeeeccc
Confidence 45556778999999999999999998754 8999999999999999999999998764 89999999999999
Q ss_pred hHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCC
Q 001895 747 SLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826 (999)
Q Consensus 747 s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgG 826 (999)
|.|++..+++.|+.+|+++|++|||||...++..|||..|+..+|.+ ..+..+.++|.+||++-+|+++++.+|||
T Consensus 258 s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte----~~~~~f~~~f~~LPl~~~i~~~~~~~hgg 333 (476)
T KOG0376|consen 258 SVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE----EMFNLFSEVFIWLPLAHLINNKVLVMHGG 333 (476)
T ss_pred ceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH----HHHHhhhhhhccccchhhhcCceEEEecC
Confidence 99999999999999999999999999999999999999999999965 46777779999999999999999999999
Q ss_pred ccC-cccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccc
Q 001895 827 IGR-SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (999)
Q Consensus 827 i~~-~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (999)
+.. .-.++++|++|.|+...+.. ..++|+|||||.. ..|..++.||.| ..||+++.++||+.|++++|||+||+
T Consensus 334 lf~~~~v~l~d~r~i~r~~~~~~~-~~~~~~lws~pq~---~~g~s~S~r~~g-~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 334 LFSPDGVTLEDFRNIDRFEQPPEE-GLMCELLWSDPQP---ANGRSPSKRGVG-LQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred cCCCCCccHHHHHhhhhccCCccc-ccccccccCCCcc---ccCCCccccCce-eeeCCCchhhHHhhcchHHHhhcccc
Confidence 954 45689999999999555544 4899999999986 478999999999 58999999999999999999999999
Q ss_pred cccceEEecCCeEEEEecccccCCCCCCeEEEEEEc-CCceEEeEEeccCCCCC
Q 001895 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAI 958 (999)
Q Consensus 906 ~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~~ 958 (999)
.+.||++-++|+|+|||||||||...+|.||++.++ ++++..+..|.++|..-
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPD 462 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCC
Confidence 999999999999999999999999999999999998 78888888888877654
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=345.64 Aligned_cols=307 Identities=24% Similarity=0.276 Sum_probs=232.3
Q ss_pred eeeeecccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEEC
Q 001895 78 VNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV 157 (999)
Q Consensus 78 ~~~~~~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~ 157 (999)
|..+....+..|.||.+|+++.+ +++||||||...... ...+++|+||+
T Consensus 9 W~~~~~~~~~~P~pR~~h~~~~~------------~~~iyv~GG~~~~~~-------------------~~~~~~~~yd~ 57 (341)
T PLN02153 9 WIKVEQKGGKGPGPRCSHGIAVV------------GDKLYSFGGELKPNE-------------------HIDKDLYVFDF 57 (341)
T ss_pred EEEecCCCCCCCCCCCcceEEEE------------CCEEEEECCccCCCC-------------------ceeCcEEEEEC
Confidence 44444445668999999999998 789999999854221 15689999999
Q ss_pred CCCcEEEecCCCCCCCC-CcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec--CCCCCCCcccEEE
Q 001895 158 LTNKWSRITPFGEPPTP-RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPGPGPRYGHVMA 234 (999)
Q Consensus 158 ~t~~W~~l~~~g~~P~p-R~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~--g~~P~~R~~h~~~ 234 (999)
.+++|+++.+++..|.. +.+|++++++++||+|||.... ...+++++||+.++ +|+.++.. ...|.+|..|+++
T Consensus 58 ~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~~~ 134 (341)
T PLN02153 58 NTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEK-REFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHSMA 134 (341)
T ss_pred CCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCC-CccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeEEE
Confidence 99999999887644443 4589999999999999998644 34689999999986 59998732 1238899999999
Q ss_pred EECCcEEEEEccCCCC------CCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC-----
Q 001895 235 LVGQRYLMAIGGNDGK------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS----- 303 (999)
Q Consensus 235 v~~~~~Lyv~GG~~g~------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~----- 303 (999)
++++ +||||||.+.. ..++++++||+.++ +|+.++.+...|.+|..|.+ ++.+++||++||.+..
T Consensus 135 ~~~~-~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~l~~~~~~~~~r~~~~~-~~~~~~iyv~GG~~~~~~~gG 210 (341)
T PLN02153 135 SDEN-HVYVFGGVSKGGLMKTPERFRTIEAYNIADG--KWVQLPDPGENFEKRGGAGF-AVVQGKIWVVYGFATSILPGG 210 (341)
T ss_pred EECC-EEEEECCccCCCccCCCcccceEEEEECCCC--eEeeCCCCCCCCCCCCcceE-EEECCeEEEEeccccccccCC
Confidence 9988 89999998643 24689999999999 99999887765555666654 4568999999997531
Q ss_pred --CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCC-----CCcccCCeEEEEECCCCeEE
Q 001895 304 --SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG-----RMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 304 --~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~-----~~~~~~~~v~vyD~~t~~W~ 376 (999)
...+++++.|++.++ +|+.....+..|.+|..|++++++++||||||..... ......+++|+||+++++|+
T Consensus 211 ~~~~~~~~v~~yd~~~~-~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~ 289 (341)
T PLN02153 211 KSDYESNAVQFFDPASG-KWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWE 289 (341)
T ss_pred ccceecCceEEEEcCCC-cEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEE
Confidence 123678999999877 4444433345688999999999999999999974211 01123679999999999999
Q ss_pred EcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE-C-CEEEEEcCCCCC-cCcCcEEEeecc
Q 001895 377 DTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV-G-DLIFIYGGLRGG-VLLDDLLVAEDL 439 (999)
Q Consensus 377 ~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~-~-~~LyV~GG~~~~-~~l~Dv~~ld~~ 439 (999)
.+...... .+|.+|+.++++.+ + ++||||||+.++ ..++|+|.++..
T Consensus 290 ~~~~~~~~----------------~~pr~~~~~~~~~v~~~~~~~~~gG~~~~~~~~~~~~~~~~~ 339 (341)
T PLN02153 290 KLGECGEP----------------AMPRGWTAYTTATVYGKNGLLMHGGKLPTNERTDDLYFYAVN 339 (341)
T ss_pred eccCCCCC----------------CCCCccccccccccCCcceEEEEcCcCCCCccccceEEEecc
Confidence 98754221 12445655555544 3 489999998764 789999998753
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=357.06 Aligned_cols=303 Identities=21% Similarity=0.311 Sum_probs=240.2
Q ss_pred eecccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCC
Q 001895 81 VIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTN 160 (999)
Q Consensus 81 ~~~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~ 160 (999)
.+...+..|.||.+|+++.+ +++||||||....... ..+++|+||+.++
T Consensus 155 ~~~~~~~~P~pR~~h~~~~~------------~~~iyv~GG~~~~~~~-------------------~~~~v~~yD~~~~ 203 (470)
T PLN02193 155 KVEQKGEGPGLRCSHGIAQV------------GNKIYSFGGEFTPNQP-------------------IDKHLYVFDLETR 203 (470)
T ss_pred EcccCCCCCCCccccEEEEE------------CCEEEEECCcCCCCCC-------------------eeCcEEEEECCCC
Confidence 33455668999999999998 7899999997542211 5578999999999
Q ss_pred cEEEecCCCCCCC-CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCc
Q 001895 161 KWSRITPFGEPPT-PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (999)
Q Consensus 161 ~W~~l~~~g~~P~-pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~ 239 (999)
+|..++.++..|. +|.+|++++++++||||||.... ..++++|+||+.++ +|+++.+.+..|.+|+.|+++++++
T Consensus 204 ~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~-~~~ndv~~yD~~t~--~W~~l~~~~~~P~~R~~h~~~~~~~- 279 (470)
T PLN02193 204 TWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS-RQYNGFYSFDTTTN--EWKLLTPVEEGPTPRSFHSMAADEE- 279 (470)
T ss_pred EEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCC-CCCccEEEEECCCC--EEEEcCcCCCCCCCccceEEEEECC-
Confidence 9999888766565 46799999999999999998643 45789999999986 5999986555699999999999987
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 240 ~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
+||||||.++...++++++||+.++ +|+.++.....|.+|..|.++ +.+++||++||.++. .+++++.|++.++
T Consensus 280 ~iYv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~R~~~~~~-~~~gkiyviGG~~g~--~~~dv~~yD~~t~- 353 (470)
T PLN02193 280 NVYVFGGVSATARLKTLDSYNIVDK--KWFHCSTPGDSFSIRGGAGLE-VVQGKVWVVYGFNGC--EVDDVHYYDPVQD- 353 (470)
T ss_pred EEEEECCCCCCCCcceEEEEECCCC--EEEeCCCCCCCCCCCCCcEEE-EECCcEEEEECCCCC--ccCceEEEECCCC-
Confidence 8999999988888999999999999 999998766556666666554 558999999998654 4789999999877
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCC-----CcccCCeEEEEECCCCeEEEcccCcCCCCCCCccccc
Q 001895 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADA 394 (999)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~-----~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~ 394 (999)
+|+.....+..|.+|..|++++++++|||+||...... .....+++|+||+.+++|+.+..+...
T Consensus 354 ~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~~~~~~~~~---------- 423 (470)
T PLN02193 354 KWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGEE---------- 423 (470)
T ss_pred EEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEEEcccCCCC----------
Confidence 55544444556889999999999999999999864210 012367899999999999999876321
Q ss_pred CCCCCccCCCCcceeEEE--EE-C-CEEEEEcCCCC-CcCcCcEEEeecc
Q 001895 395 AGGDAAVELTRRCRHAAA--AV-G-DLIFIYGGLRG-GVLLDDLLVAEDL 439 (999)
Q Consensus 395 ~~~~~~~~p~~R~~hsa~--~~-~-~~LyV~GG~~~-~~~l~Dv~~ld~~ 439 (999)
...|.+|.+|+++ .+ + +.|+||||++. +.+++|+|.++..
T Consensus 424 -----~~~P~~R~~~~~~~~~~~~~~~~~~fGG~~~~~~~~~D~~~~~~~ 468 (470)
T PLN02193 424 -----EETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGID 468 (470)
T ss_pred -----CCCCCCCccccceeeEEcCCceEEEEcCCCCccccccceEEEecC
Confidence 1236788877543 23 3 46999999874 5889999999754
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=310.76 Aligned_cols=301 Identities=25% Similarity=0.401 Sum_probs=248.4
Q ss_pred CCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCC
Q 001895 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168 (999)
Q Consensus 89 P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~ 168 (999)
-+.|.+|+++.+ +.+||-|||.-..+..... ---|+++++..+.+|+++++.
T Consensus 11 GPrRVNHAavaV------------G~riYSFGGYCsGedy~~~----------------~piDVH~lNa~~~RWtk~pp~ 62 (392)
T KOG4693|consen 11 GPRRVNHAAVAV------------GSRIYSFGGYCSGEDYDAK----------------DPIDVHVLNAENYRWTKMPPG 62 (392)
T ss_pred Ccccccceeeee------------cceEEecCCcccccccccC----------------CcceeEEeeccceeEEecCcc
Confidence 357899999999 7999999997655432110 233899999999999999872
Q ss_pred ----------CCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECC
Q 001895 169 ----------GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238 (999)
Q Consensus 169 ----------g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~ 238 (999)
...|.-|++|+++.+.+++||+||.++....-+-+|.||++++ +|.++.+.|-.|.+|.+|++|++++
T Consensus 63 ~~ka~i~~~yp~VPyqRYGHtvV~y~d~~yvWGGRND~egaCN~Ly~fDp~t~--~W~~p~v~G~vPgaRDGHsAcV~gn 140 (392)
T KOG4693|consen 63 ITKATIESPYPAVPYQRYGHTVVEYQDKAYVWGGRNDDEGACNLLYEFDPETN--VWKKPEVEGFVPGARDGHSACVWGN 140 (392)
T ss_pred cccccccCCCCccchhhcCceEEEEcceEEEEcCccCcccccceeeeeccccc--cccccceeeecCCccCCceeeEECc
Confidence 1246779999999999999999999987778899999999996 6999999999999999999999998
Q ss_pred cEEEEEccCC--CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC--------Ccc
Q 001895 239 RYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV--------PLA 308 (999)
Q Consensus 239 ~~Lyv~GG~~--g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~--------~~~ 308 (999)
.+|||||+. .+.+.+|+++||+.+. +|+.+...+.+|.-|.+|+++++ ++++|||||+..... ..+
T Consensus 141 -~MyiFGGye~~a~~FS~d~h~ld~~Tm--tWr~~~Tkg~PprwRDFH~a~~~-~~~MYiFGGR~D~~gpfHs~~e~Yc~ 216 (392)
T KOG4693|consen 141 -QMYIFGGYEEDAQRFSQDTHVLDFATM--TWREMHTKGDPPRWRDFHTASVI-DGMMYIFGGRSDESGPFHSIHEQYCD 216 (392)
T ss_pred -EEEEecChHHHHHhhhccceeEeccce--eeeehhccCCCchhhhhhhhhhc-cceEEEeccccccCCCccchhhhhcc
Confidence 899999994 4667899999999998 99999999998887888877776 699999999854332 233
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCC
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTG 388 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~ 388 (999)
.+..++.. ++.|......++.|.+|.+|++.+++++||+|||+++.-. ...+++|+|||.|..|..+..-+.
T Consensus 217 ~i~~ld~~-T~aW~r~p~~~~~P~GRRSHS~fvYng~~Y~FGGYng~ln--~HfndLy~FdP~t~~W~~I~~~Gk----- 288 (392)
T KOG4693|consen 217 TIMALDLA-TGAWTRTPENTMKPGGRRSHSTFVYNGKMYMFGGYNGTLN--VHFNDLYCFDPKTSMWSVISVRGK----- 288 (392)
T ss_pred eeEEEecc-ccccccCCCCCcCCCcccccceEEEcceEEEecccchhhh--hhhcceeecccccchheeeeccCC-----
Confidence 44445555 4466666566788999999999999999999999987654 458999999999999999987643
Q ss_pred CcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC------------C-------cCcCcEEEeeccccccc
Q 001895 389 RYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG------------G-------VLLDDLLVAEDLAAAET 444 (999)
Q Consensus 389 ~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~------------~-------~~l~Dv~~ld~~~~~~~ 444 (999)
.|.+|.++++++.+++||+|||... + ..++|+.+||..+..++
T Consensus 289 -------------~P~aRRRqC~~v~g~kv~LFGGTsP~~~~~~Spt~~~G~~~~~~LiD~SDLHvLDF~PsLKT 350 (392)
T KOG4693|consen 289 -------------YPSARRRQCSVVSGGKVYLFGGTSPLPCHPLSPTNYNGMISPSGLIDLSDLHVLDFAPSLKT 350 (392)
T ss_pred -------------CCCcccceeEEEECCEEEEecCCCCCCCCCCCccccCCCCCcccccccccceeeecChhHHH
Confidence 2579999999999999999999543 0 34688899988765544
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=337.64 Aligned_cols=263 Identities=24% Similarity=0.396 Sum_probs=240.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
.+.||++||...... ..+.+.+||+.++.|..+..+ |.+|..+++++++++||+.||
T Consensus 284 ~~~l~~vGG~~~~~~--------------------~~~~ve~yd~~~~~w~~~a~m---~~~r~~~~~~~~~~~lYv~GG 340 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQ--------------------SLRSVECYDPKTNEWSSLAPM---PSPRCRVGVAVLNGKLYVVGG 340 (571)
T ss_pred CCeEEEECCCCCCCc--------------------ccceeEEecCCcCcEeecCCC---CcccccccEEEECCEEEEEcc
Confidence 578999999986221 788999999999999999998 799999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
++.+....+++++||+.+++ |+.++ +|+.+|.+|+++++++ .||++||.+|...++.+++||+.++ +|+.++
T Consensus 341 ~~~~~~~l~~ve~YD~~~~~--W~~~a---~M~~~R~~~~v~~l~g-~iYavGG~dg~~~l~svE~YDp~~~--~W~~va 412 (571)
T KOG4441|consen 341 YDSGSDRLSSVERYDPRTNQ--WTPVA---PMNTKRSDFGVAVLDG-KLYAVGGFDGEKSLNSVECYDPVTN--KWTPVA 412 (571)
T ss_pred ccCCCcccceEEEecCCCCc--eeccC---CccCccccceeEEECC-EEEEEeccccccccccEEEecCCCC--cccccC
Confidence 97556677999999999975 99998 9999999999999998 9999999999999999999999999 999999
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCc
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGA 352 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~ 352 (999)
++.. +++.++++..+++||++||.++....++.+..||+.++ +|...++| +.+|.++++++++++||++||+
T Consensus 413 ~m~~----~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~---~W~~~~~M-~~~R~~~g~a~~~~~iYvvGG~ 484 (571)
T KOG4441|consen 413 PMLT----RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN---TWTLIAPM-NTRRSGFGVAVLNGKIYVVGGF 484 (571)
T ss_pred CCCc----ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC---ceeecCCc-ccccccceEEEECCEEEEECCc
Confidence 9877 68888888999999999999988878999999999999 99999988 6999999999999999999999
Q ss_pred CCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcCcCc
Q 001895 353 LGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432 (999)
Q Consensus 353 ~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~D 432 (999)
++... ...+++|||.+++|+.+..+ +.+|..+++++++++||++||+++..+++.
T Consensus 485 ~~~~~----~~~VE~ydp~~~~W~~v~~m---------------------~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ 539 (571)
T KOG4441|consen 485 DGTSA----LSSVERYDPETNQWTMVAPM---------------------TSPRSAVGVVVLGGKLYAVGGFDGNNNLNT 539 (571)
T ss_pred cCCCc----cceEEEEcCCCCceeEcccC---------------------ccccccccEEEECCEEEEEecccCccccce
Confidence 88332 67799999999999999877 569999999999999999999999999999
Q ss_pred EEEeecc
Q 001895 433 LLVAEDL 439 (999)
Q Consensus 433 v~~ld~~ 439 (999)
+..+|-.
T Consensus 540 ve~ydp~ 546 (571)
T KOG4441|consen 540 VECYDPE 546 (571)
T ss_pred eEEcCCC
Confidence 9999643
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=323.29 Aligned_cols=275 Identities=25% Similarity=0.386 Sum_probs=223.3
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCe--EEEEECCC----CcEEEecCCCCCCCCCcCcEEEEeCCE
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATAD--VHCYDVLT----NKWSRITPFGEPPTPRAAHVATAVGTM 186 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d--v~~yD~~t----~~W~~l~~~g~~P~pR~~hsa~~~g~~ 186 (999)
+++|+.|+|.... .++. +|.+++.+ ++|.++.+.+..|.||.+|++++++++
T Consensus 120 ~~~ivgf~G~~~~----------------------~~~~ig~y~~~~~~~~~~~~W~~~~~~~~~P~pR~~h~~~~~~~~ 177 (470)
T PLN02193 120 GGKIVGFHGRSTD----------------------VLHSLGAYISLPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQVGNK 177 (470)
T ss_pred CCeEEEEeccCCC----------------------cEEeeEEEEecCCChhhhceEEEcccCCCCCCCccccEEEEECCE
Confidence 6899999997543 3333 35557655 799999988778999999999999999
Q ss_pred EEEEcccCCC-CCCcCcEEEEecCCCCCceEEEeecCCCCC-CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 187 VVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 187 iyv~GG~~~~-~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~-~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
||||||.... ....+++|+||+.++ +|+.++..+..|. .|.+|+++++++ +||||||.++...++++|+||+.++
T Consensus 178 iyv~GG~~~~~~~~~~~v~~yD~~~~--~W~~~~~~g~~P~~~~~~~~~v~~~~-~lYvfGG~~~~~~~ndv~~yD~~t~ 254 (470)
T PLN02193 178 IYSFGGEFTPNQPIDKHLYVFDLETR--TWSISPATGDVPHLSCLGVRMVSIGS-TLYVFGGRDASRQYNGFYSFDTTTN 254 (470)
T ss_pred EEEECCcCCCCCCeeCcEEEEECCCC--EEEeCCCCCCCCCCcccceEEEEECC-EEEEECCCCCCCCCccEEEEECCCC
Confidence 9999997533 334578999999986 5999887766776 467999999998 8999999988788999999999999
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECC
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNA 344 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~ 344 (999)
+|+++.++...|.+|..|.++ ..+++||||||.+... .+++++.|++.++ +|+....++..|.+|..|+++++++
T Consensus 255 --~W~~l~~~~~~P~~R~~h~~~-~~~~~iYv~GG~~~~~-~~~~~~~yd~~t~-~W~~~~~~~~~~~~R~~~~~~~~~g 329 (470)
T PLN02193 255 --EWKLLTPVEEGPTPRSFHSMA-ADEENVYVFGGVSATA-RLKTLDSYNIVDK-KWFHCSTPGDSFSIRGGAGLEVVQG 329 (470)
T ss_pred --EEEEcCcCCCCCCCccceEEE-EECCEEEEECCCCCCC-CcceEEEEECCCC-EEEeCCCCCCCCCCCCCcEEEEECC
Confidence 999998887667777776654 4689999999997654 5788999999877 4443333334578899999999999
Q ss_pred EEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCC
Q 001895 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGL 424 (999)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~ 424 (999)
+|||+||.++.. .+++++||+.+++|+.+..++. .|.+|..|++++++++||||||.
T Consensus 330 kiyviGG~~g~~-----~~dv~~yD~~t~~W~~~~~~g~------------------~P~~R~~~~~~~~~~~iyv~GG~ 386 (470)
T PLN02193 330 KVWVVYGFNGCE-----VDDVHYYDPVQDKWTQVETFGV------------------RPSERSVFASAAVGKHIVIFGGE 386 (470)
T ss_pred cEEEEECCCCCc-----cCceEEEECCCCEEEEeccCCC------------------CCCCcceeEEEEECCEEEEECCc
Confidence 999999986432 6889999999999999876522 25789999999999999999997
Q ss_pred CC---------CcCcCcEEEeeccc
Q 001895 425 RG---------GVLLDDLLVAEDLA 440 (999)
Q Consensus 425 ~~---------~~~l~Dv~~ld~~~ 440 (999)
.. +.+++|+|.||...
T Consensus 387 ~~~~~~~~~~~~~~~ndv~~~D~~t 411 (470)
T PLN02193 387 IAMDPLAHVGPGQLTDGTFALDTET 411 (470)
T ss_pred cCCccccccCccceeccEEEEEcCc
Confidence 53 24678999999754
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=307.83 Aligned_cols=313 Identities=27% Similarity=0.421 Sum_probs=261.9
Q ss_pred ceeeeeecccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEE
Q 001895 76 SVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCY 155 (999)
Q Consensus 76 ~~~~~~~~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~y 155 (999)
--|..+....|..|.||.||-++++ ...|++|||-+. |+.++++.|
T Consensus 17 ~rWrrV~~~tGPvPrpRHGHRAVai------------kELiviFGGGNE----------------------GiiDELHvY 62 (830)
T KOG4152|consen 17 VRWRRVQQSTGPVPRPRHGHRAVAI------------KELIVIFGGGNE----------------------GIIDELHVY 62 (830)
T ss_pred cceEEEecccCCCCCccccchheee------------eeeEEEecCCcc----------------------cchhhhhhh
Confidence 3466677788999999999999999 678999999653 288999999
Q ss_pred ECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEee----cCCCCCCCccc
Q 001895 156 DVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV----QGPGPGPRYGH 231 (999)
Q Consensus 156 D~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~----~g~~P~~R~~h 231 (999)
+..+++|..-...|+.|.+-+.|..++.|++||+|||+.+.+.+++|+|.+.... |.|.++.+ .|.+|.||.+|
T Consensus 63 NTatnqWf~PavrGDiPpgcAA~GfvcdGtrilvFGGMvEYGkYsNdLYELQasR--WeWkrlkp~~p~nG~pPCPRlGH 140 (830)
T KOG4152|consen 63 NTATNQWFAPAVRGDIPPGCAAFGFVCDGTRILVFGGMVEYGKYSNDLYELQASR--WEWKRLKPKTPKNGPPPCPRLGH 140 (830)
T ss_pred ccccceeecchhcCCCCCchhhcceEecCceEEEEccEeeeccccchHHHhhhhh--hhHhhcCCCCCCCCCCCCCccCc
Confidence 9999999999999999999999999999999999999999999999998777655 67988764 57789999999
Q ss_pred EEEEECCcEEEEEccCCC---------CCCCCeEEEEECC--CCCceEEEcccCCCCCCCccceEEEEEe-----CCEEE
Q 001895 232 VMALVGQRYLMAIGGNDG---------KRPLADVWALDTA--AKPYEWRKLEPEGEGPPPCMYATASARS-----DGLLL 295 (999)
Q Consensus 232 ~~~v~~~~~Lyv~GG~~g---------~~~~ndv~~yDl~--s~~~~W~~v~~~~~~P~~r~~~~a~~~~-----~~~Ly 295 (999)
+..++++ +.|+|||... -.++||+|.+++. +.-.-|......+..|++|-.|+++++. ..+||
T Consensus 141 SFsl~gn-KcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRESHTAViY~eKDs~~skmv 219 (830)
T KOG4152|consen 141 SFSLVGN-KCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVIYTEKDSKKSKMV 219 (830)
T ss_pred eeEEecc-EeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCCCCcccceeEEEEeccCCcceEE
Confidence 9999997 9999999732 2369999999997 3345799999999999999999999883 24899
Q ss_pred EEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCC----------CCCCcccCCeE
Q 001895 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG----------GGRMVEDSSSV 365 (999)
Q Consensus 296 vfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~----------~~~~~~~~~~v 365 (999)
||||+.+. .+.|+|.+|..+- +|......|..|.||..|+++.++++||||||+-. ...-..+.+++
T Consensus 220 vyGGM~G~--RLgDLW~Ldl~Tl-~W~kp~~~G~~PlPRSLHsa~~IGnKMyvfGGWVPl~~~~~~~~~hekEWkCTssl 296 (830)
T KOG4152|consen 220 VYGGMSGC--RLGDLWTLDLDTL-TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTSSL 296 (830)
T ss_pred EEcccccc--cccceeEEeccee-ecccccccCCCCCCcccccceeecceeEEecceeeeeccccccccccceeeeccce
Confidence 99999876 5899999988755 77777777999999999999999999999999721 11113457889
Q ss_pred EEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC-------CcCcCcEEEeec
Q 001895 366 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG-------GVLLDDLLVAED 438 (999)
Q Consensus 366 ~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~-------~~~l~Dv~~ld~ 438 (999)
-++|+.+..|..+-.... ...-.|.+|.+|+++.++.+|||.-|.+| ..-..|+|.||.
T Consensus 297 ~clNldt~~W~tl~~d~~--------------ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCCkDlWyLdT 362 (830)
T KOG4152|consen 297 ACLNLDTMAWETLLMDTL--------------EDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDT 362 (830)
T ss_pred eeeeecchheeeeeeccc--------------cccccccccccceeEEeccEEEEEeccchhhHhhccccchhhhhhhcc
Confidence 999999999998753311 11125889999999999999999999764 456889999997
Q ss_pred cccc
Q 001895 439 LAAA 442 (999)
Q Consensus 439 ~~~~ 442 (999)
...+
T Consensus 363 ekPp 366 (830)
T KOG4152|consen 363 EKPP 366 (830)
T ss_pred cCCC
Confidence 6544
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-31 Score=301.73 Aligned_cols=276 Identities=22% Similarity=0.283 Sum_probs=213.6
Q ss_pred CCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEEC--CCCcEEE
Q 001895 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV--LTNKWSR 164 (999)
Q Consensus 87 ~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~--~t~~W~~ 164 (999)
..|.||..++++++ +++|||+||.. .+++|+||+ .+++|..
T Consensus 3 ~lp~~~~~~~~~~~------------~~~vyv~GG~~-------------------------~~~~~~~d~~~~~~~W~~ 45 (346)
T TIGR03547 3 DLPVGFKNGTGAII------------GDKVYVGLGSA-------------------------GTSWYKLDLKKPSKGWQK 45 (346)
T ss_pred CCCccccCceEEEE------------CCEEEEEcccc-------------------------CCeeEEEECCCCCCCceE
Confidence 46889999988888 78999999962 247899996 5788999
Q ss_pred ecCCCCCC-CCCcCcEEEEeCCEEEEEcccCCCC-----CCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEE-EEC
Q 001895 165 ITPFGEPP-TPRAAHVATAVGTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA-LVG 237 (999)
Q Consensus 165 l~~~g~~P-~pR~~hsa~~~g~~iyv~GG~~~~~-----~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~-v~~ 237 (999)
++++ | .+|..|++++++++|||+||..... ..++++|+||+.++ +|+.++ ..+|.+|.+|+++ +++
T Consensus 46 l~~~---p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~--~W~~~~--~~~p~~~~~~~~~~~~~ 118 (346)
T TIGR03547 46 IADF---PGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKN--SWQKLD--TRSPVGLLGASGFSLHN 118 (346)
T ss_pred CCCC---CCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCC--EEecCC--CCCCCcccceeEEEEeC
Confidence 9876 5 5899999999999999999985322 24689999999986 599986 2467888888887 567
Q ss_pred CcEEEEEccCCCCC----------------------------------CCCeEEEEECCCCCceEEEcccCCCCCCCccc
Q 001895 238 QRYLMAIGGNDGKR----------------------------------PLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (999)
Q Consensus 238 ~~~Lyv~GG~~g~~----------------------------------~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~ 283 (999)
+ +||++||.++.. .++++++||+.++ +|+.+.+++. .++.
T Consensus 119 g-~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~--~W~~~~~~p~---~~r~ 192 (346)
T TIGR03547 119 G-QAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTN--QWRNLGENPF---LGTA 192 (346)
T ss_pred C-EEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCC--ceeECccCCC---CcCC
Confidence 6 999999986421 2478999999999 9999987642 2456
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEec--CCCCeEEEEECCCCCCCCc-------ceeEEEEECCEEEEEcCcCC
Q 001895 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGVSPSPR-------YQHAAVFVNARLHVSGGALG 354 (999)
Q Consensus 284 ~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~--~~~~~W~w~~~~g~~P~~R-------~~hsav~~~~~L~V~GG~~~ 354 (999)
+++++..+++|||+||.........+++.|+. .++ +|...+.+ |.+| ..|++++++++|||+||.+.
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y~~~~~~~---~W~~~~~m-~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~~ 268 (346)
T TIGR03547 193 GSAIVHKGNKLLLINGEIKPGLRTAEVKQYLFTGGKL---EWNKLPPL-PPPKSSSQEGLAGAFAGISNGVLLVAGGANF 268 (346)
T ss_pred CceEEEECCEEEEEeeeeCCCccchheEEEEecCCCc---eeeecCCC-CCCCCCccccccEEeeeEECCEEEEeecCCC
Confidence 66777789999999998755444455666654 333 67777765 3443 46678889999999999863
Q ss_pred CCCC-------------cccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEE
Q 001895 355 GGRM-------------VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIY 421 (999)
Q Consensus 355 ~~~~-------------~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~ 421 (999)
.... ......+++||+++++|+.+..+ |.+|..+++++++++|||+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~l---------------------p~~~~~~~~~~~~~~iyv~ 327 (346)
T TIGR03547 269 PGAQENYKNGKLYAHEGLIKAWSSEVYALDNGKWSKVGKL---------------------PQGLAYGVSVSWNNGVLLI 327 (346)
T ss_pred CCchhhhhcCCccccCCCCceeEeeEEEecCCcccccCCC---------------------CCCceeeEEEEcCCEEEEE
Confidence 2110 00124689999999999999887 6689999988999999999
Q ss_pred cCCCC-CcCcCcEEEee
Q 001895 422 GGLRG-GVLLDDLLVAE 437 (999)
Q Consensus 422 GG~~~-~~~l~Dv~~ld 437 (999)
||.+. +..++|++.+-
T Consensus 328 GG~~~~~~~~~~v~~~~ 344 (346)
T TIGR03547 328 GGENSGGKAVTDVYLLS 344 (346)
T ss_pred eccCCCCCEeeeEEEEE
Confidence 99775 47789997653
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=317.18 Aligned_cols=234 Identities=14% Similarity=0.187 Sum_probs=201.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
..+++||+.+++|..++++ |.+|.+|++++++++||++||........+++++||+.++ +|..++ +||.+|.
T Consensus 272 ~~v~~yd~~~~~W~~l~~m---p~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n--~W~~~~---~m~~~R~ 343 (557)
T PHA02713 272 PCILVYNINTMEYSVISTI---PNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENK--IHVELP---PMIKNRC 343 (557)
T ss_pred CCEEEEeCCCCeEEECCCC---CccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCC--eEeeCC---CCcchhh
Confidence 4789999999999999876 7899999999999999999997544445789999999986 499887 8999999
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC-----
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS----- 304 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~----- 304 (999)
.|+++++++ +||++||.++...++++++||+.++ +|+.+++++. .+.+++++..+++||++||.++..
T Consensus 344 ~~~~~~~~g-~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~mp~----~r~~~~~~~~~g~IYviGG~~~~~~~~~~ 416 (557)
T PHA02713 344 RFSLAVIDD-TIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDMPI----ALSSYGMCVLDQYIYIIGGRTEHIDYTSV 416 (557)
T ss_pred ceeEEEECC-EEEEECCcCCCCCCceEEEEECCCC--eEEECCCCCc----ccccccEEEECCEEEEEeCCCcccccccc
Confidence 999999998 8999999988778899999999999 9999988765 244445556799999999986432
Q ss_pred ------------CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 305 ------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 305 ------------~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
..++.++.|++.++ +|...+++ +.+|..+++++++++|||+||.++... ..+.+++|||++
T Consensus 417 ~~~~~~~~~~~~~~~~~ve~YDP~td---~W~~v~~m-~~~r~~~~~~~~~~~IYv~GG~~~~~~---~~~~ve~Ydp~~ 489 (557)
T PHA02713 417 HHMNSIDMEEDTHSSNKVIRYDTVNN---IWETLPNF-WTGTIRPGVVSHKDDIYVVCDIKDEKN---VKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccccceEEEECCCCC---eEeecCCC-CcccccCcEEEECCEEEEEeCCCCCCc---cceeEEEecCCC
Confidence 12578999999999 78888776 689999999999999999999875332 135689999999
Q ss_pred -CeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC
Q 001895 373 -GVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG 426 (999)
Q Consensus 373 -~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~ 426 (999)
++|+.++.+ |.+|..+++++++++||++||+++
T Consensus 490 ~~~W~~~~~m---------------------~~~r~~~~~~~~~~~iyv~Gg~~~ 523 (557)
T PHA02713 490 YNGWELITTT---------------------ESRLSALHTILHDNTIMMLHCYES 523 (557)
T ss_pred CCCeeEcccc---------------------CcccccceeEEECCEEEEEeeecc
Confidence 899999988 679999999999999999999886
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=274.48 Aligned_cols=228 Identities=24% Similarity=0.374 Sum_probs=205.2
Q ss_pred CCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEec
Q 001895 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (999)
Q Consensus 87 ~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~ 166 (999)
..|..|+||+.+.+ .+++||+||.++.++ .-|.+|+||++++.|.+..
T Consensus 74 ~VPyqRYGHtvV~y------------~d~~yvWGGRND~eg--------------------aCN~Ly~fDp~t~~W~~p~ 121 (392)
T KOG4693|consen 74 AVPYQRYGHTVVEY------------QDKAYVWGGRNDDEG--------------------ACNLLYEFDPETNVWKKPE 121 (392)
T ss_pred ccchhhcCceEEEE------------cceEEEEcCccCccc--------------------ccceeeeeccccccccccc
Confidence 56889999999999 799999999998775 7889999999999999999
Q ss_pred CCCCCCCCCcCcEEEEeCCEEEEEcccCCC-CCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEc
Q 001895 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (999)
Q Consensus 167 ~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~-~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~G 245 (999)
..|..|.+|.+|++|++++.+|||||+..+ ...++|+++||+.+.+ |+.+.+.|..|.=|..|+++++++ .+||||
T Consensus 122 v~G~vPgaRDGHsAcV~gn~MyiFGGye~~a~~FS~d~h~ld~~Tmt--Wr~~~Tkg~PprwRDFH~a~~~~~-~MYiFG 198 (392)
T KOG4693|consen 122 VEGFVPGARDGHSACVWGNQMYIFGGYEEDAQRFSQDTHVLDFATMT--WREMHTKGDPPRWRDFHTASVIDG-MMYIFG 198 (392)
T ss_pred eeeecCCccCCceeeEECcEEEEecChHHHHHhhhccceeEecccee--eeehhccCCCchhhhhhhhhhccc-eEEEec
Confidence 999999999999999999999999998643 4567899999999975 999999999999999999999997 899999
Q ss_pred cCCC---------CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC-CCcccEEEEec
Q 001895 246 GNDG---------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAK 315 (999)
Q Consensus 246 G~~g---------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~-~~~~d~~~~~~ 315 (999)
|... ..+.+.+-.||+.+. .|......+..|..|+.|++.++ +++||+|||.++.- ..++|+|.|++
T Consensus 199 GR~D~~gpfHs~~e~Yc~~i~~ld~~T~--aW~r~p~~~~~P~GRRSHS~fvY-ng~~Y~FGGYng~ln~HfndLy~FdP 275 (392)
T KOG4693|consen 199 GRSDESGPFHSIHEQYCDTIMALDLATG--AWTRTPENTMKPGGRRSHSTFVY-NGKMYMFGGYNGTLNVHFNDLYCFDP 275 (392)
T ss_pred cccccCCCccchhhhhcceeEEEecccc--ccccCCCCCcCCCcccccceEEE-cceEEEecccchhhhhhhcceeeccc
Confidence 9843 224677889999999 99999888888999999988777 99999999997754 46899999999
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcC
Q 001895 316 HRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGAL 353 (999)
Q Consensus 316 ~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~ 353 (999)
.+. .|.-+.+.+..|.+|..+++++.++++|+|||..
T Consensus 276 ~t~-~W~~I~~~Gk~P~aRRRqC~~v~g~kv~LFGGTs 312 (392)
T KOG4693|consen 276 KTS-MWSVISVRGKYPSARRRQCSVVSGGKVYLFGGTS 312 (392)
T ss_pred ccc-hheeeeccCCCCCcccceeEEEECCEEEEecCCC
Confidence 877 8888888899999999999999999999999964
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=294.13 Aligned_cols=284 Identities=16% Similarity=0.196 Sum_probs=210.3
Q ss_pred CCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCC--CcEEEecC
Q 001895 90 GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT--NKWSRITP 167 (999)
Q Consensus 90 ~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t--~~W~~l~~ 167 (999)
..+.||.+.++ ++.|||+||.......- ...|. ...++++|+|+... .+|..+..
T Consensus 2 ~~~~g~~~~~~------------~~~l~v~GG~~~~~~~~---------~~~g~--~~~~~~v~~~~~~~~~~~W~~~~~ 58 (323)
T TIGR03548 2 LGVAGCYAGII------------GDYILVAGGCNFPEDPL---------AEGGK--KKNYKGIYIAKDENSNLKWVKDGQ 58 (323)
T ss_pred CceeeEeeeEE------------CCEEEEeeccCCCCCch---------hhCCc--EEeeeeeEEEecCCCceeEEEccc
Confidence 45678888888 78999999986543100 00111 12778999996333 37999876
Q ss_pred CCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceE-EEeecCCCCCCCcccEEEEECCcEEEEEcc
Q 001895 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGPGPRYGHVMALVGQRYLMAIGG 246 (999)
Q Consensus 168 ~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~-~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG 246 (999)
+ |.+|..|++++++++||++||.... ...+++++||+.+.+ |. .+...+++|.+|..|+++++++ +|||+||
T Consensus 59 l---p~~r~~~~~~~~~~~lyviGG~~~~-~~~~~v~~~d~~~~~--w~~~~~~~~~lp~~~~~~~~~~~~~-~iYv~GG 131 (323)
T TIGR03548 59 L---PYEAAYGASVSVENGIYYIGGSNSS-ERFSSVYRITLDESK--EELICETIGNLPFTFENGSACYKDG-TLYVGGG 131 (323)
T ss_pred C---CccccceEEEEECCEEEEEcCCCCC-CCceeEEEEEEcCCc--eeeeeeEcCCCCcCccCceEEEECC-EEEEEeC
Confidence 5 7899989999999999999998643 356899999998865 52 2233348999999999999998 8999999
Q ss_pred CCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEEC
Q 001895 247 NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIA 326 (999)
Q Consensus 247 ~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~ 326 (999)
......++++|+||+.++ +|+++++++.. ++.+++++..+++||||||.++.. ..+++.|++.++ +|...
T Consensus 132 ~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~---~r~~~~~~~~~~~iYv~GG~~~~~--~~~~~~yd~~~~---~W~~~ 201 (323)
T TIGR03548 132 NRNGKPSNKSYLFNLETQ--EWFELPDFPGE---PRVQPVCVKLQNELYVFGGGSNIA--YTDGYKYSPKKN---QWQKV 201 (323)
T ss_pred cCCCccCceEEEEcCCCC--CeeECCCCCCC---CCCcceEEEECCEEEEEcCCCCcc--ccceEEEecCCC---eeEEC
Confidence 876667899999999999 99999865432 345556667799999999987543 467899999887 66666
Q ss_pred CCC----CCCCcceeEE-EEECCEEEEEcCcCCCCC----------------------------CcccCCeEEEEECCCC
Q 001895 327 PGV----SPSPRYQHAA-VFVNARLHVSGGALGGGR----------------------------MVEDSSSVAVLDTAAG 373 (999)
Q Consensus 327 ~g~----~P~~R~~hsa-v~~~~~L~V~GG~~~~~~----------------------------~~~~~~~v~vyD~~t~ 373 (999)
+.+ .|..+..+++ ++.+++|||+||.+.... .....+++++||+.++
T Consensus 202 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 281 (323)
T TIGR03548 202 ADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTG 281 (323)
T ss_pred CCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhCCCccccCcCceEEEEECCCC
Confidence 543 2344444544 445799999999864210 0011367999999999
Q ss_pred eEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCC-CCcCcCcE
Q 001895 374 VWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR-GGVLLDDL 433 (999)
Q Consensus 374 ~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~-~~~~l~Dv 433 (999)
+|+.++.++ ..+|+.+++++++++||++||.. .+.+...+
T Consensus 282 ~W~~~~~~p--------------------~~~r~~~~~~~~~~~iyv~GG~~~pg~rt~~~ 322 (323)
T TIGR03548 282 KWKSIGNSP--------------------FFARCGAALLLTGNNIFSINGELKPGVRTPDI 322 (323)
T ss_pred eeeEccccc--------------------ccccCchheEEECCEEEEEeccccCCcCCcCc
Confidence 999998661 14899999999999999999954 44555443
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=306.26 Aligned_cols=297 Identities=31% Similarity=0.508 Sum_probs=247.8
Q ss_pred cccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccC-eEEEEECCCCc
Q 001895 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATA-DVHCYDVLTNK 161 (999)
Q Consensus 83 ~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-dv~~yD~~t~~ 161 (999)
...+..|.+|++|+++.+ ++++|||||...... ..+ |+|.||..+..
T Consensus 52 ~~~~~~p~~R~~hs~~~~------------~~~~~vfGG~~~~~~--------------------~~~~dl~~~d~~~~~ 99 (482)
T KOG0379|consen 52 DVLGVGPIPRAGHSAVLI------------GNKLYVFGGYGSGDR--------------------LTDLDLYVLDLESQL 99 (482)
T ss_pred ccCCCCcchhhccceeEE------------CCEEEEECCCCCCCc--------------------cccceeEEeecCCcc
Confidence 356789999999999999 789999999876553 112 79999999999
Q ss_pred EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEE
Q 001895 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (999)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~L 241 (999)
|......+..|.+|++|++++++++||+|||........++++.||+.+.+ |..+.+.+.+|.+|.+|+++++++ +|
T Consensus 100 w~~~~~~g~~p~~r~g~~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~t~~--W~~l~~~~~~P~~r~~Hs~~~~g~-~l 176 (482)
T KOG0379|consen 100 WTKPAATGDEPSPRYGHSLSAVGDKLYLFGGTDKKYRNLNELHSLDLSTRT--WSLLSPTGDPPPPRAGHSATVVGT-KL 176 (482)
T ss_pred cccccccCCCCCcccceeEEEECCeEEEEccccCCCCChhheEeccCCCCc--EEEecCcCCCCCCcccceEEEECC-EE
Confidence 999999999999999999999999999999987656668999999999975 999999999999999999999997 99
Q ss_pred EEEccCCCCC-CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001895 242 MAIGGNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (999)
Q Consensus 242 yv~GG~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~ 320 (999)
|||||.+... .+||+|+||+.+. +|.++...+..|.||..|+++++ ++++++|||.+.....++|+|.||..+
T Consensus 177 ~vfGG~~~~~~~~ndl~i~d~~~~--~W~~~~~~g~~P~pR~gH~~~~~-~~~~~v~gG~~~~~~~l~D~~~ldl~~--- 250 (482)
T KOG0379|consen 177 VVFGGIGGTGDSLNDLHIYDLETS--TWSELDTQGEAPSPRYGHAMVVV-GNKLLVFGGGDDGDVYLNDVHILDLST--- 250 (482)
T ss_pred EEECCccCcccceeeeeeeccccc--cceecccCCCCCCCCCCceEEEE-CCeEEEEeccccCCceecceEeeeccc---
Confidence 9999998766 8999999999999 99999999999998888877766 777777777775566899999999986
Q ss_pred EEEEECC--CCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCC
Q 001895 321 WEWAIAP--GVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (999)
Q Consensus 321 W~w~~~~--g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (999)
|.|.... +..|.+|+.|+.++.+.+++|+||...... ..+.++|.||.++..|..+.....
T Consensus 251 ~~W~~~~~~g~~p~~R~~h~~~~~~~~~~l~gG~~~~~~--~~l~~~~~l~~~~~~w~~~~~~~~--------------- 313 (482)
T KOG0379|consen 251 WEWKLLPTGGDLPSPRSGHSLTVSGDHLLLFGGGTDPKQ--EPLGDLYGLDLETLVWSKVESVGV--------------- 313 (482)
T ss_pred ceeeeccccCCCCCCcceeeeEEECCEEEEEcCCccccc--ccccccccccccccceeeeecccc---------------
Confidence 5666544 778999999999999999999999876521 237899999999999999988741
Q ss_pred CccCCCCcceeEEEEECC----EEEEEcCCC-CCcCcCcEEEeecc
Q 001895 399 AAVELTRRCRHAAAAVGD----LIFIYGGLR-GGVLLDDLLVAEDL 439 (999)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~----~LyV~GG~~-~~~~l~Dv~~ld~~ 439 (999)
..|.+|..|+++.... .+.++||.. .....++++.+...
T Consensus 314 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (482)
T KOG0379|consen 314 --VRPSPRLGHAAELIDELGKDGLGILGGNQILGERLADVFSLQIK 357 (482)
T ss_pred --ccccccccccceeeccCCccceeeecCccccccchhhccccccc
Confidence 2356888898887744 344455522 23556666655443
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=295.53 Aligned_cols=283 Identities=19% Similarity=0.231 Sum_probs=214.2
Q ss_pred cccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECC--CC
Q 001895 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TN 160 (999)
Q Consensus 83 ~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~--t~ 160 (999)
......|.||..++.+.+ +++|||+||.. .+.+|+||+. ++
T Consensus 20 ~~l~~lP~~~~~~~~~~~------------~~~iyv~gG~~-------------------------~~~~~~~d~~~~~~ 62 (376)
T PRK14131 20 EQLPDLPVPFKNGTGAID------------NNTVYVGLGSA-------------------------GTSWYKLDLNAPSK 62 (376)
T ss_pred ccCCCCCcCccCCeEEEE------------CCEEEEEeCCC-------------------------CCeEEEEECCCCCC
Confidence 344578899998888887 78999999962 1257899986 47
Q ss_pred cEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCC-----CCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEE
Q 001895 161 KWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235 (999)
Q Consensus 161 ~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~-----~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v 235 (999)
.|..+.++ +..+|.+|++++++++|||+||.... ....+++|+||+.++ +|+.++. ..|.+|.+|++++
T Consensus 63 ~W~~l~~~--p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n--~W~~~~~--~~p~~~~~~~~~~ 136 (376)
T PRK14131 63 GWTKIAAF--PGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTN--SWQKLDT--RSPVGLAGHVAVS 136 (376)
T ss_pred CeEECCcC--CCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCC--EEEeCCC--CCCCcccceEEEE
Confidence 89999876 12589999999999999999998641 134689999999986 5999872 3577888898877
Q ss_pred -ECCcEEEEEccCCCC----------------------------------CCCCeEEEEECCCCCceEEEcccCCCCCCC
Q 001895 236 -VGQRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (999)
Q Consensus 236 -~~~~~Lyv~GG~~g~----------------------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (999)
.++ +||++||.+.. ...+++++||+.++ +|+.+.+++ .+
T Consensus 137 ~~~~-~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~--~W~~~~~~p---~~ 210 (376)
T PRK14131 137 LHNG-KAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN--QWKNAGESP---FL 210 (376)
T ss_pred eeCC-EEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC--eeeECCcCC---CC
Confidence 565 99999998532 12578999999999 999987653 33
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEE--ecCCCCeEEEEECCCCCCCCcc--------eeEEEEECCEEEEEc
Q 001895 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGL--AKHRDGRWEWAIAPGVSPSPRY--------QHAAVFVNARLHVSG 350 (999)
Q Consensus 281 r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~--~~~~~~~W~w~~~~g~~P~~R~--------~hsav~~~~~L~V~G 350 (999)
++.+++++..+++|||+||.........++|.+ ++.++ +|...+.+ |.+|. .+.+++++++|||+|
T Consensus 211 ~~~~~a~v~~~~~iYv~GG~~~~~~~~~~~~~~~~~~~~~---~W~~~~~~-p~~~~~~~~~~~~~~~a~~~~~~iyv~G 286 (376)
T PRK14131 211 GTAGSAVVIKGNKLWLINGEIKPGLRTDAVKQGKFTGNNL---KWQKLPDL-PPAPGGSSQEGVAGAFAGYSNGVLLVAG 286 (376)
T ss_pred CCCcceEEEECCEEEEEeeeECCCcCChhheEEEecCCCc---ceeecCCC-CCCCcCCcCCccceEeceeECCEEEEee
Confidence 466677778899999999986554445566655 44444 67777765 44442 344678899999999
Q ss_pred CcCCCCCC-------------cccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCE
Q 001895 351 GALGGGRM-------------VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 417 (999)
Q Consensus 351 G~~~~~~~-------------~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~ 417 (999)
|.+..... ......+++||+++++|+.+..+ |.+|..|++++++++
T Consensus 287 G~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~l---------------------p~~r~~~~av~~~~~ 345 (376)
T PRK14131 287 GANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNGKWQKVGEL---------------------PQGLAYGVSVSWNNG 345 (376)
T ss_pred ccCCCCChhhhhcCCcccccCCcceeehheEEecCCcccccCcC---------------------CCCccceEEEEeCCE
Confidence 98642210 01123578999999999998877 678999999999999
Q ss_pred EEEEcCCCC-CcCcCcEEEeecc
Q 001895 418 IFIYGGLRG-GVLLDDLLVAEDL 439 (999)
Q Consensus 418 LyV~GG~~~-~~~l~Dv~~ld~~ 439 (999)
|||+||... +..++|++.++..
T Consensus 346 iyv~GG~~~~~~~~~~v~~~~~~ 368 (376)
T PRK14131 346 VLLIGGETAGGKAVSDVTLLSWD 368 (376)
T ss_pred EEEEcCCCCCCcEeeeEEEEEEc
Confidence 999999764 4689999888743
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=291.14 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=200.2
Q ss_pred CCCcEEEecCCC-CCCCCCcCcEEEEeCCEEEEEcccCCC-CCCcCcEEEEecCCCCCceEEEeecCCCCCC-CcccEEE
Q 001895 158 LTNKWSRITPFG-EPPTPRAAHVATAVGTMVVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP-RYGHVMA 234 (999)
Q Consensus 158 ~t~~W~~l~~~g-~~P~pR~~hsa~~~g~~iyv~GG~~~~-~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~-R~~h~~~ 234 (999)
....|.++...+ ..|.||.+|++++++++|||+||.... ....+++|+||+.++ +|+.+++.+..|.. +.+|+++
T Consensus 5 ~~~~W~~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~p~~~~~~~~~~ 82 (341)
T PLN02153 5 LQGGWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTH--TWSIAPANGDVPRISCLGVRMV 82 (341)
T ss_pred cCCeEEEecCCCCCCCCCCCcceEEEECCEEEEECCccCCCCceeCcEEEEECCCC--EEEEcCccCCCCCCccCceEEE
Confidence 456799998753 468999999999999999999998532 334589999999986 59998865555543 4588999
Q ss_pred EECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCC--CCCCccceEEEEEeCCEEEEEeccCCCC-----CCc
Q 001895 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE--GPPPCMYATASARSDGLLLLCGGRDASS-----VPL 307 (999)
Q Consensus 235 v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~--~P~~r~~~~a~~~~~~~LyvfGG~~~~~-----~~~ 307 (999)
++++ +||||||.++...++++++||+.++ +|+.++.+.. .|.+|..|+ +++.+++||||||.+... ..+
T Consensus 83 ~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~ 158 (341)
T PLN02153 83 AVGT-KLYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHS-MASDENHVYVFGGVSKGGLMKTPERF 158 (341)
T ss_pred EECC-EEEEECCCCCCCccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeE-EEEECCEEEEECCccCCCccCCCccc
Confidence 9998 8999999988778899999999999 9999876532 255565554 456689999999986432 235
Q ss_pred ccEEEEecCCCCeEEEEECCC--CCCCCcceeEEEEECCEEEEEcCcCCC----CCCcccCCeEEEEECCCCeEEEcccC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPG--VSPSPRYQHAAVFVNARLHVSGGALGG----GRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g--~~P~~R~~hsav~~~~~L~V~GG~~~~----~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
++++.|++.++ +|...+. ..|.+|.+|++++++++|||+||.... +......+++++||+.+++|+++...
T Consensus 159 ~~v~~yd~~~~---~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~ 235 (341)
T PLN02153 159 RTIEAYNIADG---KWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETT 235 (341)
T ss_pred ceEEEEECCCC---eEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEecccc
Confidence 78999999877 5555553 346789999999999999999997532 11112267899999999999998765
Q ss_pred cCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCC---------CCcCcCcEEEeeccc
Q 001895 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR---------GGVLLDDLLVAEDLA 440 (999)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~---------~~~~l~Dv~~ld~~~ 440 (999)
+. .|.+|..|++++++++||||||.. .+.+++|+|.+|...
T Consensus 236 g~------------------~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~ 285 (341)
T PLN02153 236 GA------------------KPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTET 285 (341)
T ss_pred CC------------------CCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCc
Confidence 22 367999999999999999999963 245678999999754
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=309.25 Aligned_cols=242 Identities=24% Similarity=0.433 Sum_probs=217.3
Q ss_pred ecccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCcccccccccCeEEEEECCCC
Q 001895 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTN 160 (999)
Q Consensus 82 ~~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~ 160 (999)
+......|.+|..|+++++ +++||++||.+. .. ..+.+++||+.++
T Consensus 313 w~~~a~m~~~r~~~~~~~~------------~~~lYv~GG~~~~~~---------------------~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 313 WSSLAPMPSPRCRVGVAVL------------NGKLYVVGGYDSGSD---------------------RLSSVERYDPRTN 359 (571)
T ss_pred EeecCCCCcccccccEEEE------------CCEEEEEccccCCCc---------------------ccceEEEecCCCC
Confidence 3455678999999999999 789999999984 32 7899999999999
Q ss_pred cEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE
Q 001895 161 KWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (999)
Q Consensus 161 ~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~ 240 (999)
+|+.+++| ..+|..|++++++++||+.||.+ +....+.+++||+.++ +|+.+. +|+.+|++|+++++++ +
T Consensus 360 ~W~~~a~M---~~~R~~~~v~~l~g~iYavGG~d-g~~~l~svE~YDp~~~--~W~~va---~m~~~r~~~gv~~~~g-~ 429 (571)
T KOG4441|consen 360 QWTPVAPM---NTKRSDFGVAVLDGKLYAVGGFD-GEKSLNSVECYDPVTN--KWTPVA---PMLTRRSGHGVAVLGG-K 429 (571)
T ss_pred ceeccCCc---cCccccceeEEECCEEEEEeccc-cccccccEEEecCCCC--cccccC---CCCcceeeeEEEEECC-E
Confidence 99999998 69999999999999999999997 4456789999999996 599997 8999999999999998 9
Q ss_pred EEEEccCCCCC-CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 241 LMAIGGNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 241 Lyv~GG~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
||++||.++.. +++.+++||+.++ +|+.++++.. ++.++++++.+++||++||.++ ...+..++.|++.++
T Consensus 430 iYi~GG~~~~~~~l~sve~YDP~t~--~W~~~~~M~~----~R~~~g~a~~~~~iYvvGG~~~-~~~~~~VE~ydp~~~- 501 (571)
T KOG4441|consen 430 LYIIGGGDGSSNCLNSVECYDPETN--TWTLIAPMNT----RRSGFGVAVLNGKIYVVGGFDG-TSALSSVERYDPETN- 501 (571)
T ss_pred EEEEcCcCCCccccceEEEEcCCCC--ceeecCCccc----ccccceEEEECCEEEEECCccC-CCccceEEEEcCCCC-
Confidence 99999999888 8999999999999 9999999988 5777778888999999999998 446777999999999
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
+|..+..+ +.+|..++++++++++|++||+++... ++.+.+|||++++|+....+
T Consensus 502 --~W~~v~~m-~~~rs~~g~~~~~~~ly~vGG~~~~~~----l~~ve~ydp~~d~W~~~~~~ 556 (571)
T KOG4441|consen 502 --QWTMVAPM-TSPRSAVGVVVLGGKLYAVGGFDGNNN----LNTVECYDPETDTWTEVTEP 556 (571)
T ss_pred --ceeEcccC-ccccccccEEEECCEEEEEecccCccc----cceeEEcCCCCCceeeCCCc
Confidence 88888666 689999999999999999999877654 89999999999999998874
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=278.10 Aligned_cols=266 Identities=27% Similarity=0.480 Sum_probs=219.8
Q ss_pred eeecccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCC
Q 001895 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (999)
Q Consensus 80 ~~~~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t 159 (999)
.+.+....+|.||...++++-+. .+.|+||||...+....- ++||+|.||+.+
T Consensus 55 ~~~e~~~~~PspRsn~sl~~nPe----------keELilfGGEf~ngqkT~-----------------vYndLy~Yn~k~ 107 (521)
T KOG1230|consen 55 HVVETSVPPPSPRSNPSLFANPE----------KEELILFGGEFYNGQKTH-----------------VYNDLYSYNTKK 107 (521)
T ss_pred eeeeccCCCCCCCCCcceeeccC----------cceeEEecceeecceeEE-----------------EeeeeeEEeccc
Confidence 34566778999999999998754 467999999765433221 899999999999
Q ss_pred CcEEEecCCCCCCCCCcCcEEEEeC-CEEEEEcccCCC-----CCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEE
Q 001895 160 NKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVM 233 (999)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~g-~~iyv~GG~~~~-----~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~ 233 (999)
++|+++... ..|.||.+|.++++. |.+|+|||.... -....|+|+||+.++ +|+++...| .|.+|++|-|
T Consensus 108 ~eWkk~~sp-n~P~pRsshq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~tr--kweql~~~g-~PS~RSGHRM 183 (521)
T KOG1230|consen 108 NEWKKVVSP-NAPPPRSSHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTR--KWEQLEFGG-GPSPRSGHRM 183 (521)
T ss_pred cceeEeccC-CCcCCCccceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccc--hheeeccCC-CCCCCcccee
Confidence 999999765 379999999999996 799999996422 234689999999997 599998665 8999999999
Q ss_pred EEECCcEEEEEccCCC----CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC-------
Q 001895 234 ALVGQRYLMAIGGNDG----KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA------- 302 (999)
Q Consensus 234 ~v~~~~~Lyv~GG~~g----~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~------- 302 (999)
+++.. +|++|||+.. ..++||||+||+.+- +|+++.+.+..|.||.++...+..++.|||+||+..
T Consensus 184 vawK~-~lilFGGFhd~nr~y~YyNDvy~FdLdty--kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~ 260 (521)
T KOG1230|consen 184 VAWKR-QLILFGGFHDSNRDYIYYNDVYAFDLDTY--KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDV 260 (521)
T ss_pred EEeee-eEEEEcceecCCCceEEeeeeEEEeccce--eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhh
Confidence 99998 8999999843 346999999999887 999999988889999999888888999999999742
Q ss_pred -CCCCcccEEEEecCC--CCeEEEEECC--CCCCCCcceeEEEEEC-CEEEEEcCcCCCC-----CCcccCCeEEEEECC
Q 001895 303 -SSVPLASAYGLAKHR--DGRWEWAIAP--GVSPSPRYQHAAVFVN-ARLHVSGGALGGG-----RMVEDSSSVAVLDTA 371 (999)
Q Consensus 303 -~~~~~~d~~~~~~~~--~~~W~w~~~~--g~~P~~R~~hsav~~~-~~L~V~GG~~~~~-----~~~~~~~~v~vyD~~ 371 (999)
.+...+|+|.+++.. ...|.|..+. ++.|.||.++++++.. ++-+.|||..+-. -.....|++|.||+.
T Consensus 261 dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt 340 (521)
T KOG1230|consen 261 DKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLT 340 (521)
T ss_pred hcCceeeeeeeecCCcCCCcceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheecc
Confidence 345789999998876 4589998876 6889999999998885 5999999986511 112338999999999
Q ss_pred CCeEEEcc
Q 001895 372 AGVWCDTK 379 (999)
Q Consensus 372 t~~W~~v~ 379 (999)
.++|....
T Consensus 341 ~nrW~~~q 348 (521)
T KOG1230|consen 341 RNRWSEGQ 348 (521)
T ss_pred cchhhHhh
Confidence 99999864
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=277.01 Aligned_cols=218 Identities=47% Similarity=0.755 Sum_probs=174.8
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhh
Q 001895 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780 (999)
Q Consensus 701 ~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~ 780 (999)
+|||||||++.+|.++|+.++....+ .+||||||||||+.+.||+.+|+.++.. |.++++||||||.+.++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d------~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~ 73 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFL 73 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCC------EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhh
Confidence 58999999999999999999886554 8999999999999999999999999888 8899999999999998887
Q ss_pred cCChHHHH-----HHhCCccchhhhhhhhhhhcccceeEEEcC-cEEEecCCccCcccCHHHhhhccCCcccCCCCceee
Q 001895 781 FGFRIECI-----ERMGERDGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM 854 (999)
Q Consensus 781 ~gf~~e~~-----~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~ 854 (999)
+++..+.. ..........++..+.++|..||+++.++. +++|||||+.+.....+++. ..+ ......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~-~~~~~~ 146 (225)
T cd00144 74 YGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEP-EDQLPE 146 (225)
T ss_pred cCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCc-ccccce
Confidence 77654421 001111234577888899999999999987 99999999998866555444 111 123678
Q ss_pred ecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCe
Q 001895 855 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNA 934 (999)
Q Consensus 855 dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ 934 (999)
+++|++|.... .....+.|+. |+++++.|++.++.++|||||+++.+|+.....+++|||+|++.|++..+|.
T Consensus 147 ~~lw~r~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~ 219 (225)
T cd00144 147 DLLWSDPLELP--GGFGSSRRGG-----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNK 219 (225)
T ss_pred eeeecCCCCCC--CCCcCCCCCC-----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCcc
Confidence 99999997532 2222333332 8999999999999999999999999998777789999999999998877777
Q ss_pred EEEEE
Q 001895 935 GAILV 939 (999)
Q Consensus 935 ga~l~ 939 (999)
.+++.
T Consensus 220 l~~~~ 224 (225)
T cd00144 220 LAALV 224 (225)
T ss_pred EEEEe
Confidence 76654
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=303.39 Aligned_cols=239 Identities=11% Similarity=0.119 Sum_probs=200.6
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
.....|.+|.+|+++++ +++||++||...... .++++++||+.+++|.
T Consensus 286 ~l~~mp~~r~~~~~a~l------------~~~IYviGG~~~~~~--------------------~~~~v~~Yd~~~n~W~ 333 (557)
T PHA02713 286 VISTIPNHIINYASAIV------------DNEIIIAGGYNFNNP--------------------SLNKVYKINIENKIHV 333 (557)
T ss_pred ECCCCCccccceEEEEE------------CCEEEEEcCCCCCCC--------------------ccceEEEEECCCCeEe
Confidence 34578899999999988 789999999753221 5789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA 243 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv 243 (999)
.++++ |.+|.+|++++++++||++||.+.. ...+++++||+.++ +|+.++ ++|.+|.+|+++++++ +||+
T Consensus 334 ~~~~m---~~~R~~~~~~~~~g~IYviGG~~~~-~~~~sve~Ydp~~~--~W~~~~---~mp~~r~~~~~~~~~g-~IYv 403 (557)
T PHA02713 334 ELPPM---IKNRCRFSLAVIDDTIYAIGGQNGT-NVERTIECYTMGDD--KWKMLP---DMPIALSSYGMCVLDQ-YIYI 403 (557)
T ss_pred eCCCC---cchhhceeEEEECCEEEEECCcCCC-CCCceEEEEECCCC--eEEECC---CCCcccccccEEEECC-EEEE
Confidence 99887 7899999999999999999998533 35678999999986 499987 8999999999999998 8999
Q ss_pred EccCCCCC------------------CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001895 244 IGGNDGKR------------------PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (999)
Q Consensus 244 ~GG~~g~~------------------~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~ 305 (999)
+||.++.. .++.+++||+.++ +|+.++++.. ++..+++++.+++||++||.++...
T Consensus 404 iGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m~~----~r~~~~~~~~~~~IYv~GG~~~~~~ 477 (557)
T PHA02713 404 IGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNFWT----GTIRPGVVSHKDDIYVVCDIKDEKN 477 (557)
T ss_pred EeCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCCCc----ccccCcEEEECCEEEEEeCCCCCCc
Confidence 99986421 3688999999999 9999988765 3455566777999999999875443
Q ss_pred CcccEEEEecCC-CCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 306 PLASAYGLAKHR-DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 306 ~~~d~~~~~~~~-~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
....++.||+.+ + +|..++.+ |.+|..+++++++++|||+||+++. ..+++||+.|++|+.+.+.
T Consensus 478 ~~~~ve~Ydp~~~~---~W~~~~~m-~~~r~~~~~~~~~~~iyv~Gg~~~~-------~~~e~yd~~~~~W~~~~~~ 543 (557)
T PHA02713 478 VKTCIFRYNTNTYN---GWELITTT-ESRLSALHTILHDNTIMMLHCYESY-------MLQDTFNVYTYEWNHICHQ 543 (557)
T ss_pred cceeEEEecCCCCC---CeeEcccc-CcccccceeEEECCEEEEEeeecce-------eehhhcCcccccccchhhh
Confidence 345678999998 6 66777765 7999999999999999999998762 3689999999999988765
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=290.39 Aligned_cols=245 Identities=31% Similarity=0.503 Sum_probs=215.2
Q ss_pred CCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcC-cEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEc
Q 001895 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAE-DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (999)
Q Consensus 167 ~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~-dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~G 245 (999)
..+..|.+|+.|+++.+++++|||||........+ |+|+||+.+. .|.+....|..|.+|++|+++++++ +||+||
T Consensus 53 ~~~~~p~~R~~hs~~~~~~~~~vfGG~~~~~~~~~~dl~~~d~~~~--~w~~~~~~g~~p~~r~g~~~~~~~~-~l~lfG 129 (482)
T KOG0379|consen 53 VLGVGPIPRAGHSAVLIGNKLYVFGGYGSGDRLTDLDLYVLDLESQ--LWTKPAATGDEPSPRYGHSLSAVGD-KLYLFG 129 (482)
T ss_pred cCCCCcchhhccceeEECCEEEEECCCCCCCccccceeEEeecCCc--ccccccccCCCCCcccceeEEEECC-eEEEEc
Confidence 44567999999999999999999999875544433 7999999985 5999999999999999999999998 999999
Q ss_pred cCCC-CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001895 246 GNDG-KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (999)
Q Consensus 246 G~~g-~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~ 324 (999)
|.+. ...+++++.||+.+. +|..+.+.+..|++|.+|+++++ +++||||||.+.....++++|.|+..+. +|...
T Consensus 130 G~~~~~~~~~~l~~~d~~t~--~W~~l~~~~~~P~~r~~Hs~~~~-g~~l~vfGG~~~~~~~~ndl~i~d~~~~-~W~~~ 205 (482)
T KOG0379|consen 130 GTDKKYRNLNELHSLDLSTR--TWSLLSPTGDPPPPRAGHSATVV-GTKLVVFGGIGGTGDSLNDLHIYDLETS-TWSEL 205 (482)
T ss_pred cccCCCCChhheEeccCCCC--cEEEecCcCCCCCCcccceEEEE-CCEEEEECCccCcccceeeeeeeccccc-cceec
Confidence 9984 667899999999999 99999999998888888888777 6999999999888778999999999877 58888
Q ss_pred ECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCC
Q 001895 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELT 404 (999)
Q Consensus 325 ~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~ 404 (999)
.+.+..|.||++|+++++++++||+||.+... .+++|+|+||+.+.+|..+...+ ..|.
T Consensus 206 ~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~---~~l~D~~~ldl~~~~W~~~~~~g------------------~~p~ 264 (482)
T KOG0379|consen 206 DTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGD---VYLNDVHILDLSTWEWKLLPTGG------------------DLPS 264 (482)
T ss_pred ccCCCCCCCCCCceEEEECCeEEEEeccccCC---ceecceEeeecccceeeeccccC------------------CCCC
Confidence 88899999999999999999999999998333 34899999999999999776552 3478
Q ss_pred CcceeEEEEECCEEEEEcCCCCC-c-CcCcEEEeecc
Q 001895 405 RRCRHAAAAVGDLIFIYGGLRGG-V-LLDDLLVAEDL 439 (999)
Q Consensus 405 ~R~~hsa~~~~~~LyV~GG~~~~-~-~l~Dv~~ld~~ 439 (999)
+|++|.++..+++++++||.... . .+.|+|.|+..
T Consensus 265 ~R~~h~~~~~~~~~~l~gG~~~~~~~~l~~~~~l~~~ 301 (482)
T KOG0379|consen 265 PRSGHSLTVSGDHLLLFGGGTDPKQEPLGDLYGLDLE 301 (482)
T ss_pred CcceeeeEEECCEEEEEcCCccccccccccccccccc
Confidence 99999999999999999997764 3 79999999876
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=292.75 Aligned_cols=249 Identities=16% Similarity=0.251 Sum_probs=206.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
..+.+|+..+++|..+... | .+..|+++++++.||++||........+++++||+.++ +|..++ ++|.+|.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~---~~~~~R~ 334 (534)
T PHA03098 264 YNYITNYSPLSEINTIIDI---H-YVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTK--SWNKVP---ELIYPRK 334 (534)
T ss_pred ceeeecchhhhhcccccCc---c-ccccceEEEECCEEEEECCCcCCCCeeccEEEEeCCCC--eeeECC---CCCcccc
Confidence 3456788888999988643 2 35567999999999999998766666789999999986 599887 8899999
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
+|+++++++ +||++||.++...++++++||+.++ +|+.+++++. +|.. ++++..+++||++||.......+++
T Consensus 335 ~~~~~~~~~-~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~lp~---~r~~-~~~~~~~~~iYv~GG~~~~~~~~~~ 407 (534)
T PHA03098 335 NPGVTVFNN-RIYVIGGIYNSISLNTVESWKPGES--KWREEPPLIF---PRYN-PCVVNVNNLIYVIGGISKNDELLKT 407 (534)
T ss_pred cceEEEECC-EEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCcCc---CCcc-ceEEEECCEEEEECCcCCCCcccce
Confidence 999999988 8999999987778899999999999 9999887654 3444 4556679999999998665556789
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCC
Q 001895 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGR 389 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~ 389 (999)
++.|++.++ +|...+.+ |.+|.+|+++.++++|||+||.+..... ...+.+++||+.+++|+.++.+
T Consensus 408 v~~yd~~t~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~-~~~~~v~~yd~~~~~W~~~~~~-------- 474 (534)
T PHA03098 408 VECFSLNTN---KWSKGSPL-PISHYGGCAIYHDGKIYVIGGISYIDNI-KVYNIVESYNPVTNKWTELSSL-------- 474 (534)
T ss_pred EEEEeCCCC---eeeecCCC-CccccCceEEEECCEEEEECCccCCCCC-cccceEEEecCCCCceeeCCCC--------
Confidence 999999887 67777655 7899999999999999999998654321 2256799999999999999876
Q ss_pred cccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 390 YSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 390 ~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
+.+|..|++++++++|||+||.++....++++++|...
T Consensus 475 -------------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 475 -------------NFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred -------------CcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCC
Confidence 56899999999999999999998777789999998553
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-27 Score=283.65 Aligned_cols=234 Identities=18% Similarity=0.274 Sum_probs=193.5
Q ss_pred CCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCC
Q 001895 92 RCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEP 171 (999)
Q Consensus 92 R~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~ 171 (999)
+..|+++++ +++||++||...... ..+++++||+.+++|..++.+
T Consensus 285 ~~~~~~~~~------------~~~lyv~GG~~~~~~--------------------~~~~v~~yd~~~~~W~~~~~~--- 329 (534)
T PHA03098 285 VYCFGSVVL------------NNVIYFIGGMNKNNL--------------------SVNSVVSYDTKTKSWNKVPEL--- 329 (534)
T ss_pred cccceEEEE------------CCEEEEECCCcCCCC--------------------eeccEEEEeCCCCeeeECCCC---
Confidence 445677777 789999999865332 567999999999999998776
Q ss_pred CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCC-CC
Q 001895 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GK 250 (999)
Q Consensus 172 P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~-g~ 250 (999)
|.+|.+|++++++++||++||.. .....+++++||+.++ +|+.++ ++|.+|++|+++++++ +||++||.. +.
T Consensus 330 ~~~R~~~~~~~~~~~lyv~GG~~-~~~~~~~v~~yd~~~~--~W~~~~---~lp~~r~~~~~~~~~~-~iYv~GG~~~~~ 402 (534)
T PHA03098 330 IYPRKNPGVTVFNNRIYVIGGIY-NSISLNTVESWKPGES--KWREEP---PLIFPRYNPCVVNVNN-LIYVIGGISKND 402 (534)
T ss_pred CcccccceEEEECCEEEEEeCCC-CCEecceEEEEcCCCC--ceeeCC---CcCcCCccceEEEECC-EEEEECCcCCCC
Confidence 78999999999999999999986 3445689999999986 599887 8999999999999988 899999974 34
Q ss_pred CCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC--CCcccEEEEecCCCCeEEEEECCC
Q 001895 251 RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS--VPLASAYGLAKHRDGRWEWAIAPG 328 (999)
Q Consensus 251 ~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~--~~~~d~~~~~~~~~~~W~w~~~~g 328 (999)
..++++++||+.++ +|+.+.+++ .++..+ +++..+++||++||.+... ..++.++.|++.++ +|...+.
T Consensus 403 ~~~~~v~~yd~~t~--~W~~~~~~p---~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~W~~~~~ 473 (534)
T PHA03098 403 ELLKTVECFSLNTN--KWSKGSPLP---ISHYGG-CAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN---KWTELSS 473 (534)
T ss_pred cccceEEEEeCCCC--eeeecCCCC---ccccCc-eEEEECCEEEEECCccCCCCCcccceEEEecCCCC---ceeeCCC
Confidence 45799999999999 999987654 334444 4556699999999986543 23567999999988 7777775
Q ss_pred CCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 329 VSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 329 ~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
+ |.+|..++++.++++|||+||.+.... .+++++||+++++|..+..+
T Consensus 474 ~-~~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~ 521 (534)
T PHA03098 474 L-NFPRINASLCIFNNKIYVVGGDKYEYY----INEIEVYDDKTNTWTLFCKF 521 (534)
T ss_pred C-CcccccceEEEECCEEEEEcCCcCCcc----cceeEEEeCCCCEEEecCCC
Confidence 5 688999999999999999999876432 67899999999999998875
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-26 Score=256.15 Aligned_cols=224 Identities=18% Similarity=0.209 Sum_probs=179.7
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcE-
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW- 162 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W- 162 (999)
.....|.||..|+++.+ +++||++||..... .++++|+||+.+++|
T Consensus 55 ~~~~lp~~r~~~~~~~~------------~~~lyviGG~~~~~---------------------~~~~v~~~d~~~~~w~ 101 (323)
T TIGR03548 55 KDGQLPYEAAYGASVSV------------ENGIYYIGGSNSSE---------------------RFSSVYRITLDESKEE 101 (323)
T ss_pred EcccCCccccceEEEEE------------CCEEEEEcCCCCCC---------------------CceeEEEEEEcCCcee
Confidence 34578999988888887 78999999986433 678999999999998
Q ss_pred ---EEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC-CCCcccEEEEECC
Q 001895 163 ---SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVGQ 238 (999)
Q Consensus 163 ---~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P-~~R~~h~~~v~~~ 238 (999)
..+++ .|.+|..|++++++++|||+||... ....+++++||+.++ +|+.++ ++| .+|..|+++++++
T Consensus 102 ~~~~~~~~---lp~~~~~~~~~~~~~~iYv~GG~~~-~~~~~~v~~yd~~~~--~W~~~~---~~p~~~r~~~~~~~~~~ 172 (323)
T TIGR03548 102 LICETIGN---LPFTFENGSACYKDGTLYVGGGNRN-GKPSNKSYLFNLETQ--EWFELP---DFPGEPRVQPVCVKLQN 172 (323)
T ss_pred eeeeEcCC---CCcCccCceEEEECCEEEEEeCcCC-CccCceEEEEcCCCC--CeeECC---CCCCCCCCcceEEEECC
Confidence 44444 4889999999999999999999743 344689999999986 599987 666 4799999988988
Q ss_pred cEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCC--CCCCccceEEEEEeCCEEEEEeccCCCCC-----------
Q 001895 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE--GPPPCMYATASARSDGLLLLCGGRDASSV----------- 305 (999)
Q Consensus 239 ~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~--~P~~r~~~~a~~~~~~~LyvfGG~~~~~~----------- 305 (999)
+|||+||.++.. ..++++||+.++ +|+.++++.. .|..+..++++++.+++||++||.+....
T Consensus 173 -~iYv~GG~~~~~-~~~~~~yd~~~~--~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 248 (323)
T TIGR03548 173 -ELYVFGGGSNIA-YTDGYKYSPKKN--QWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMK 248 (323)
T ss_pred -EEEEEcCCCCcc-ccceEEEecCCC--eeEECCCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhcc
Confidence 899999987643 568999999999 9999987643 23334456666777899999999874310
Q ss_pred --------------------CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCC
Q 001895 306 --------------------PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG 356 (999)
Q Consensus 306 --------------------~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~ 356 (999)
..+.++.||+.++ +|...+.++..+|..++++.++++|||+||....+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~pg 316 (323)
T TIGR03548 249 DESLKGYKKEYFLKPPEWYNWNRKILIYNVRTG---KWKSIGNSPFFARCGAALLLTGNNIFSINGELKPG 316 (323)
T ss_pred chhhhhhHHHHhCCCccccCcCceEEEEECCCC---eeeEcccccccccCchheEEECCEEEEEeccccCC
Confidence 1357999999988 77777755446899999999999999999986654
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=265.60 Aligned_cols=208 Identities=18% Similarity=0.276 Sum_probs=174.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||++||..... ..+.+++||+.+++|..++++ |.+|..|++++++++||++||
T Consensus 271 ~~~lyviGG~~~~~---------------------~~~~v~~Ydp~~~~W~~~~~m---~~~r~~~~~v~~~~~iYviGG 326 (480)
T PHA02790 271 GEVVYLIGGWMNNE---------------------IHNNAIAVNYISNNWIPIPPM---NSPRLYASGVPANNKLYVVGG 326 (480)
T ss_pred CCEEEEEcCCCCCC---------------------cCCeEEEEECCCCEEEECCCC---CchhhcceEEEECCEEEEECC
Confidence 78999999985432 667899999999999999987 789999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
... .+.+++||+.++ +|+.++ ++|.+|.+|+++++++ +||++||.++. .+.+++||+.++ +|+.++
T Consensus 327 ~~~----~~sve~ydp~~n--~W~~~~---~l~~~r~~~~~~~~~g-~IYviGG~~~~--~~~ve~ydp~~~--~W~~~~ 392 (480)
T PHA02790 327 LPN----PTSVERWFHGDA--AWVNMP---SLLKPRCNPAVASINN-VIYVIGGHSET--DTTTEYLLPNHD--QWQFGP 392 (480)
T ss_pred cCC----CCceEEEECCCC--eEEECC---CCCCCCcccEEEEECC-EEEEecCcCCC--CccEEEEeCCCC--EEEeCC
Confidence 742 257899999875 599987 8999999999999998 89999998654 368999999999 999998
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCc
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGA 352 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~ 352 (999)
++.. +|.. ++++..+++||++||. ...|++.++ +|...+++ |.+|..+++++++++|||+||.
T Consensus 393 ~m~~---~r~~-~~~~~~~~~IYv~GG~---------~e~ydp~~~---~W~~~~~m-~~~r~~~~~~v~~~~IYviGG~ 455 (480)
T PHA02790 393 STYY---PHYK-SCALVFGRRLFLVGRN---------AEFYCESSN---TWTLIDDP-IYPRDNPELIIVDNKLLLIGGF 455 (480)
T ss_pred CCCC---cccc-ceEEEECCEEEEECCc---------eEEecCCCC---cEeEcCCC-CCCccccEEEEECCEEEEECCc
Confidence 8755 2444 4556679999999984 456788777 67777766 6899999999999999999998
Q ss_pred CCCCCCcccCCeEEEEECCCCeEEEcc
Q 001895 353 LGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 353 ~~~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
++.. ..+.+++||+++++|+...
T Consensus 456 ~~~~----~~~~ve~Yd~~~~~W~~~~ 478 (480)
T PHA02790 456 YRGS----YIDTIEVYNNRTYSWNIWD 478 (480)
T ss_pred CCCc----ccceEEEEECCCCeEEecC
Confidence 7533 2578999999999998653
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=238.85 Aligned_cols=245 Identities=23% Similarity=0.381 Sum_probs=197.6
Q ss_pred CCCCCCcCcEEEEe--CCEEEEEcccCCCC---CCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEE
Q 001895 170 EPPTPRAAHVATAV--GTMVVIQGGIGPAG---LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (999)
Q Consensus 170 ~~P~pR~~hsa~~~--g~~iyv~GG~~~~~---~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~ 244 (999)
.+|+||.+.++++. .+.|++|||..-.+ ...+|+|.|++.+++ |.++... ..|.||++|.++++..+.||+|
T Consensus 62 ~~PspRsn~sl~~nPekeELilfGGEf~ngqkT~vYndLy~Yn~k~~e--Wkk~~sp-n~P~pRsshq~va~~s~~l~~f 138 (521)
T KOG1230|consen 62 PPPSPRSNPSLFANPEKEELILFGGEFYNGQKTHVYNDLYSYNTKKNE--WKKVVSP-NAPPPRSSHQAVAVPSNILWLF 138 (521)
T ss_pred CCCCCCCCcceeeccCcceeEEecceeecceeEEEeeeeeEEeccccc--eeEeccC-CCcCCCccceeEEeccCeEEEe
Confidence 37999999999987 35999999954333 346999999999975 9998643 6789999999999987799999
Q ss_pred ccCCC----CC--CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC---CCCCcccEEEEec
Q 001895 245 GGNDG----KR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA---SSVPLASAYGLAK 315 (999)
Q Consensus 245 GG~~g----~~--~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~---~~~~~~d~~~~~~ 315 (999)
||--. .. -+.|+|.||+.++ +|+++...+ .|.+|.+|-+++. ...|++|||+.. +..++||+|.|+.
T Consensus 139 GGEfaSPnq~qF~HYkD~W~fd~~tr--kweql~~~g-~PS~RSGHRMvaw-K~~lilFGGFhd~nr~y~YyNDvy~FdL 214 (521)
T KOG1230|consen 139 GGEFASPNQEQFHHYKDLWLFDLKTR--KWEQLEFGG-GPSPRSGHRMVAW-KRQLILFGGFHDSNRDYIYYNDVYAFDL 214 (521)
T ss_pred ccccCCcchhhhhhhhheeeeeeccc--hheeeccCC-CCCCCccceeEEe-eeeEEEEcceecCCCceEEeeeeEEEec
Confidence 99732 11 2789999999999 999998877 4788888877666 889999999743 3457899999998
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCC-----CcccCCeEEEEECCC-----CeEEEcccCcCC
Q 001895 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-----MVEDSSSVAVLDTAA-----GVWCDTKSVVTS 384 (999)
Q Consensus 316 ~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~-----~~~~~~~v~vyD~~t-----~~W~~v~~~~~~ 384 (999)
.+- +|......+..|.||.+|+..+. .+.|||+||++.... .....+|+|.++++. .+|.++.+.+.+
T Consensus 215 dty-kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~k 293 (521)
T KOG1230|consen 215 DTY-KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVK 293 (521)
T ss_pred cce-eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCcceeEeeccCCCCC
Confidence 865 66666666777999999999998 999999999863110 012278999999999 799999988554
Q ss_pred CCCCCcccccCCCCCccCCCCcceeEEEEECC-EEEEEcCCCC---------CcCcCcEEEeeccc
Q 001895 385 PRTGRYSADAAGGDAAVELTRRCRHAAAAVGD-LIFIYGGLRG---------GVLLDDLLVAEDLA 440 (999)
Q Consensus 385 p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~-~LyV~GG~~~---------~~~l~Dv~~ld~~~ 440 (999)
|.+|.++++++..+ +-|.|||... +.++||+|.+|+..
T Consensus 294 ------------------PspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt~ 341 (521)
T KOG1230|consen 294 ------------------PSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLTR 341 (521)
T ss_pred ------------------CCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheeccc
Confidence 57999999999854 9999999543 47899999998754
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=246.45 Aligned_cols=222 Identities=18% Similarity=0.263 Sum_probs=169.5
Q ss_pred CCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC-CCCcccEEEEECCcEEEEEccCCC
Q 001895 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVGQRYLMAIGGNDG 249 (999)
Q Consensus 171 ~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P-~~R~~h~~~v~~~~~Lyv~GG~~g 249 (999)
.|.+|..+++|+++++|||+||.. .+++|+||+...+.+|..++ ++| .+|..|+++++++ +|||+||.+.
T Consensus 4 lp~~~~~~~~~~~~~~vyv~GG~~-----~~~~~~~d~~~~~~~W~~l~---~~p~~~R~~~~~~~~~~-~iYv~GG~~~ 74 (346)
T TIGR03547 4 LPVGFKNGTGAIIGDKVYVGLGSA-----GTSWYKLDLKKPSKGWQKIA---DFPGGPRNQAVAAAIDG-KLYVFGGIGK 74 (346)
T ss_pred CCccccCceEEEECCEEEEEcccc-----CCeeEEEECCCCCCCceECC---CCCCCCcccceEEEECC-EEEEEeCCCC
Confidence 588999999999999999999973 26799999864445799998 888 5899999999998 8999999854
Q ss_pred C------CCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC-------------------
Q 001895 250 K------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS------------------- 304 (999)
Q Consensus 250 ~------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~------------------- 304 (999)
. ..++++|+||+.++ +|+.++.. .|..+..+.++++.+++||++||.+...
T Consensus 75 ~~~~~~~~~~~~v~~Yd~~~~--~W~~~~~~--~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (346)
T TIGR03547 75 ANSEGSPQVFDDVYRYDPKKN--SWQKLDTR--SPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAADKDSEPKD 150 (346)
T ss_pred CCCCCcceecccEEEEECCCC--EEecCCCC--CCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhcCccchhhh
Confidence 2 25789999999999 99999732 2344445555557899999999986421
Q ss_pred --------------CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEE-
Q 001895 305 --------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLD- 369 (999)
Q Consensus 305 --------------~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD- 369 (999)
..+++++.||+.++ +|...+.++..+|..|+++.++++|||+||...... ...++++||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~YDp~t~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~y~~ 224 (346)
T TIGR03547 151 KLIAAYFSQPPEDYFWNKNVLSYDPSTN---QWRNLGENPFLGTAGSAIVHKGNKLLLINGEIKPGL---RTAEVKQYLF 224 (346)
T ss_pred hhHHHHhCCChhHcCccceEEEEECCCC---ceeECccCCCCcCCCceEEEECCEEEEEeeeeCCCc---cchheEEEEe
Confidence 01478999999988 777777664347899999999999999999864331 135566665
Q ss_pred -CCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCC
Q 001895 370 -TAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR 425 (999)
Q Consensus 370 -~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~ 425 (999)
+++++|..+..++.. +. ..+..|..|++++++++|||+||.+
T Consensus 225 ~~~~~~W~~~~~m~~~-r~-------------~~~~~~~~~~a~~~~~~Iyv~GG~~ 267 (346)
T TIGR03547 225 TGGKLEWNKLPPLPPP-KS-------------SSQEGLAGAFAGISNGVLLVAGGAN 267 (346)
T ss_pred cCCCceeeecCCCCCC-CC-------------CccccccEEeeeEECCEEEEeecCC
Confidence 577799999887321 00 0122446777889999999999975
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=249.37 Aligned_cols=247 Identities=22% Similarity=0.299 Sum_probs=181.4
Q ss_pred CCC-CCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEe
Q 001895 87 DGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (999)
Q Consensus 87 ~~P-~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l 165 (999)
..| .+|.+|+++.+ +++||||||........ ....++++|+||+.+++|+++
T Consensus 69 ~~p~~~r~~~~~v~~------------~~~IYV~GG~~~~~~~~---------------~~~~~~~v~~YD~~~n~W~~~ 121 (376)
T PRK14131 69 AFPGGPREQAVAAFI------------DGKLYVFGGIGKTNSEG---------------SPQVFDDVYKYDPKTNSWQKL 121 (376)
T ss_pred cCCCCCcccceEEEE------------CCEEEEEcCCCCCCCCC---------------ceeEcccEEEEeCCCCEEEeC
Confidence 345 48999999988 78999999986411000 001678999999999999999
Q ss_pred cCCCCCCCCCcCcEEEE-eCCEEEEEcccCCCC---------------------------------CCcCcEEEEecCCC
Q 001895 166 TPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAG---------------------------------LSAEDLHVLDLTQQ 211 (999)
Q Consensus 166 ~~~g~~P~pR~~hsa~~-~g~~iyv~GG~~~~~---------------------------------~~~~dv~vyD~~t~ 211 (999)
+.. .|.+|.+|++++ .+++||++||..... ...+++++||+.++
T Consensus 122 ~~~--~p~~~~~~~~~~~~~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~ 199 (376)
T PRK14131 122 DTR--SPVGLAGHVAVSLHNGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN 199 (376)
T ss_pred CCC--CCCcccceEEEEeeCCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC
Confidence 753 377788898887 799999999975310 12478999999996
Q ss_pred CCceEEEeecCCCCC-CCcccEEEEECCcEEEEEccCCCC-CCCCeEEE--EECCCCCceEEEcccCCCCCC---C-ccc
Q 001895 212 RPRWHRVVVQGPGPG-PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWA--LDTAAKPYEWRKLEPEGEGPP---P-CMY 283 (999)
Q Consensus 212 t~kW~~v~~~g~~P~-~R~~h~~~v~~~~~Lyv~GG~~g~-~~~ndv~~--yDl~s~~~~W~~v~~~~~~P~---~-r~~ 283 (999)
+|+.+. ++|. +|.+|+++++++ +|||+||.... ....++|. ||+.++ +|+.+.+++.++. + +..
T Consensus 200 --~W~~~~---~~p~~~~~~~a~v~~~~-~iYv~GG~~~~~~~~~~~~~~~~~~~~~--~W~~~~~~p~~~~~~~~~~~~ 271 (376)
T PRK14131 200 --QWKNAG---ESPFLGTAGSAVVIKGN-KLWLINGEIKPGLRTDAVKQGKFTGNNL--KWQKLPDLPPAPGGSSQEGVA 271 (376)
T ss_pred --eeeECC---cCCCCCCCcceEEEECC-EEEEEeeeECCCcCChhheEEEecCCCc--ceeecCCCCCCCcCCcCCccc
Confidence 499876 7785 788999988887 89999997432 23455654 456677 9999987754321 1 123
Q ss_pred eEEEEEeCCEEEEEeccCCCCC----------------CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEE
Q 001895 284 ATASARSDGLLLLCGGRDASSV----------------PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347 (999)
Q Consensus 284 ~~a~~~~~~~LyvfGG~~~~~~----------------~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~ 347 (999)
++.+++.+++|||+||.+.... ....+..|++.++ +|.....+ |.+|..++++.++++||
T Consensus 272 ~~~a~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~r~~~~av~~~~~iy 347 (376)
T PRK14131 272 GAFAGYSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNG---KWQKVGEL-PQGLAYGVSVSWNNGVL 347 (376)
T ss_pred eEeceeECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCC---cccccCcC-CCCccceEEEEeCCEEE
Confidence 3445667999999999863210 1123567887776 56666554 78999999999999999
Q ss_pred EEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 348 V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
|+||....+ ...++|++|+++.+.|+.
T Consensus 348 v~GG~~~~~---~~~~~v~~~~~~~~~~~~ 374 (376)
T PRK14131 348 LIGGETAGG---KAVSDVTLLSWDGKKLTV 374 (376)
T ss_pred EEcCCCCCC---cEeeeEEEEEEcCCEEEE
Confidence 999986543 237899999999988875
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-24 Score=253.73 Aligned_cols=204 Identities=18% Similarity=0.297 Sum_probs=172.2
Q ss_pred EEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEE
Q 001895 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (999)
Q Consensus 180 a~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~y 259 (999)
++.+++.||++||.+. ....+++++||+.++ +|..++ ++|.+|..++++++++ +||++||.++. +.+++|
T Consensus 267 ~~~~~~~lyviGG~~~-~~~~~~v~~Ydp~~~--~W~~~~---~m~~~r~~~~~v~~~~-~iYviGG~~~~---~sve~y 336 (480)
T PHA02790 267 STHVGEVVYLIGGWMN-NEIHNNAIAVNYISN--NWIPIP---PMNSPRLYASGVPANN-KLYVVGGLPNP---TSVERW 336 (480)
T ss_pred eEEECCEEEEEcCCCC-CCcCCeEEEEECCCC--EEEECC---CCCchhhcceEEEECC-EEEEECCcCCC---CceEEE
Confidence 4558999999999753 345678999999986 599998 8999999999999987 89999998642 679999
Q ss_pred ECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001895 260 DTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (999)
Q Consensus 260 Dl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsa 339 (999)
|+.++ +|+.+++++. .+..++++..+++||++||.++. .+.+..|++.++ +|...+++ |.+|..|++
T Consensus 337 dp~~n--~W~~~~~l~~----~r~~~~~~~~~g~IYviGG~~~~---~~~ve~ydp~~~---~W~~~~~m-~~~r~~~~~ 403 (480)
T PHA02790 337 FHGDA--AWVNMPSLLK----PRCNPAVASINNVIYVIGGHSET---DTTTEYLLPNHD---QWQFGPST-YYPHYKSCA 403 (480)
T ss_pred ECCCC--eEEECCCCCC----CCcccEEEEECCEEEEecCcCCC---CccEEEEeCCCC---EEEeCCCC-CCccccceE
Confidence 99999 9999988765 34455666779999999998643 356788999888 77777766 689999999
Q ss_pred EEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEE
Q 001895 340 VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419 (999)
Q Consensus 340 v~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~Ly 419 (999)
++++++|||+||. +++||+++++|+.++++ +.+|..+++++++++||
T Consensus 404 ~~~~~~IYv~GG~------------~e~ydp~~~~W~~~~~m---------------------~~~r~~~~~~v~~~~IY 450 (480)
T PHA02790 404 LVFGRRLFLVGRN------------AEFYCESSNTWTLIDDP---------------------IYPRDNPELIIVDNKLL 450 (480)
T ss_pred EEECCEEEEECCc------------eEEecCCCCcEeEcCCC---------------------CCCccccEEEEECCEEE
Confidence 9999999999983 57899999999999887 66999999999999999
Q ss_pred EEcCCCCCcCcCcEEEeecc
Q 001895 420 IYGGLRGGVLLDDLLVAEDL 439 (999)
Q Consensus 420 V~GG~~~~~~l~Dv~~ld~~ 439 (999)
|+||+++...++.++++|..
T Consensus 451 viGG~~~~~~~~~ve~Yd~~ 470 (480)
T PHA02790 451 LIGGFYRGSYIDTIEVYNNR 470 (480)
T ss_pred EECCcCCCcccceEEEEECC
Confidence 99998876667888888754
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=241.90 Aligned_cols=255 Identities=25% Similarity=0.372 Sum_probs=201.5
Q ss_pred eeecccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCC
Q 001895 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (999)
Q Consensus 80 ~~~~~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t 159 (999)
......|+.|.+-..|.++.. +.+||+|||...... +.||+|.+....
T Consensus 70 f~PavrGDiPpgcAA~Gfvcd------------GtrilvFGGMvEYGk--------------------YsNdLYELQasR 117 (830)
T KOG4152|consen 70 FAPAVRGDIPPGCAAFGFVCD------------GTRILVFGGMVEYGK--------------------YSNDLYELQASR 117 (830)
T ss_pred ecchhcCCCCCchhhcceEec------------CceEEEEccEeeecc--------------------ccchHHHhhhhh
Confidence 344567899999999999988 799999999987654 889999999888
Q ss_pred CcEEEecCC----CCCCCCCcCcEEEEeCCEEEEEcccCCC--------CCCcCcEEEEecCCC--CCceEEEeecCCCC
Q 001895 160 NKWSRITPF----GEPPTPRAAHVATAVGTMVVIQGGIGPA--------GLSAEDLHVLDLTQQ--RPRWHRVVVQGPGP 225 (999)
Q Consensus 160 ~~W~~l~~~----g~~P~pR~~hsa~~~g~~iyv~GG~~~~--------~~~~~dv~vyD~~t~--t~kW~~v~~~g~~P 225 (999)
-.|+++.+. |.+|.||.+|+..+++++.|+|||...+ ..+++|+|++++.-. ..-|....+.|..|
T Consensus 118 WeWkrlkp~~p~nG~pPCPRlGHSFsl~gnKcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P 197 (830)
T KOG4152|consen 118 WEWKRLKPKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLP 197 (830)
T ss_pred hhHhhcCCCCCCCCCCCCCccCceeEEeccEeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCC
Confidence 899998654 5689999999999999999999996432 246899999998742 23599999999999
Q ss_pred CCCcccEEEEEC-----CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 226 GPRYGHVMALVG-----QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 226 ~~R~~h~~~v~~-----~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
.+|..|+++++. ..++||+||..|. .+.|+|.+|+++. +|.+..-.+..|.||.-|+++.+ +++||||||+
T Consensus 198 ~pRESHTAViY~eKDs~~skmvvyGGM~G~-RLgDLW~Ldl~Tl--~W~kp~~~G~~PlPRSLHsa~~I-GnKMyvfGGW 273 (830)
T KOG4152|consen 198 PPRESHTAVIYTEKDSKKSKMVVYGGMSGC-RLGDLWTLDLDTL--TWNKPSLSGVAPLPRSLHSATTI-GNKMYVFGGW 273 (830)
T ss_pred CCcccceeEEEEeccCCcceEEEEcccccc-cccceeEEeccee--ecccccccCCCCCCcccccceee-cceeEEecce
Confidence 999999999981 2389999999874 5899999999988 99999999999999999988877 8999999996
Q ss_pred CCC-------------CCCcccEEEEecCCCCeEEEEECC----CCCCCCcceeEEEEECCEEEEEcCcCCCCCCc---c
Q 001895 301 DAS-------------SVPLASAYGLAKHRDGRWEWAIAP----GVSPSPRYQHAAVFVNARLHVSGGALGGGRMV---E 360 (999)
Q Consensus 301 ~~~-------------~~~~~d~~~~~~~~~~~W~w~~~~----g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~---~ 360 (999)
-.. -.+.+..-+++..+. .|+-.... ...|.+|.+|+++.++.+||+..|+++..... .
T Consensus 274 VPl~~~~~~~~~hekEWkCTssl~clNldt~-~W~tl~~d~~ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQV 352 (830)
T KOG4152|consen 274 VPLVMDDVKVATHEKEWKCTSSLACLNLDTM-AWETLLMDTLEDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQV 352 (830)
T ss_pred eeeeccccccccccceeeeccceeeeeecch-heeeeeeccccccccccccccceeEEeccEEEEEeccchhhHhhcccc
Confidence 211 123334444444444 44433222 23689999999999999999999998643211 2
Q ss_pred cCCeEEEEECC
Q 001895 361 DSSSVAVLDTA 371 (999)
Q Consensus 361 ~~~~v~vyD~~ 371 (999)
+..|+|.+|.+
T Consensus 353 CCkDlWyLdTe 363 (830)
T KOG4152|consen 353 CCKDLWYLDTE 363 (830)
T ss_pred chhhhhhhccc
Confidence 34667777754
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=210.89 Aligned_cols=185 Identities=21% Similarity=0.354 Sum_probs=131.2
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCcc--ceeEEEeccccCCCCChHHHHHHHHHhhhc---CCCCEEEecCCcccc
Q 001895 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIA--YIDYLFLGDYVDRGQHSLETITLLLALKVE---YPNNVHLIRGNHEAA 775 (999)
Q Consensus 701 ~vvGDiHG~~~~L~~il~~~g~~~~~~~~~--~~~~vfLGDyVDRG~~s~evl~ll~~lk~~---~P~~v~llrGNHE~~ 775 (999)
+||||||||+..|.++|+.+++......|. ...+||+|||||||+++.|||.+|++|+.+ .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 589999999999999999988643221111 227999999999999999999999999854 456899999999999
Q ss_pred chhhhcCChHH-HHHHhCCc--cchhhh---hhhhhhhcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCC
Q 001895 776 DINALFGFRIE-CIERMGER--DGIWAW---HRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAG 849 (999)
Q Consensus 776 ~~~~~~gf~~e-~~~~~g~~--~~~~~~---~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~ 849 (999)
.++..+.+... ....+... ....++ ..+.+++..||+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 98754433211 11111100 001122 34478899999998876 68899999922
Q ss_pred CceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecc
Q 001895 850 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSA 924 (999)
Q Consensus 850 ~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa 924 (999)
+|+...-. +... ..-+.+.+.++|+.++.++||+||+.++.|...+++|++|+|...
T Consensus 140 -------~w~r~y~~-------~~~~----~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 -------LWYRGYSK-------ETSD----KECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred -------HHhhHhhh-------hhhh----ccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 33221100 0000 011236788999999999999999999988877899999999873
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-22 Score=217.10 Aligned_cols=130 Identities=22% Similarity=0.369 Sum_probs=98.0
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCC---ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGD---IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~---~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
++.||||||||++.|.++|+++++....+. ....++||||||||||++|+|||.+|++|. .+.++++||||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 589999999999999999999987421100 001279999999999999999999999885 346899999999998
Q ss_pred chhhhcCC-------hHHHHHHhCCc---cchhhhhhhhhhhcccceeEEEc-CcEEEecCCccCc
Q 001895 776 DINALFGF-------RIECIERMGER---DGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRS 830 (999)
Q Consensus 776 ~~~~~~gf-------~~e~~~~~g~~---~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~ 830 (999)
.++...+- ..+....|... ....+++.+.++|+.||++.+++ ++++|||||+.+.
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 87755331 11222333221 12346678899999999998774 6899999999876
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-21 Score=204.83 Aligned_cols=129 Identities=24% Similarity=0.439 Sum_probs=98.8
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCC----CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAG----DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~----~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
.+|.||||||||+..|.++|+.+++...+. .....++||||||||||++|.|||.+|++|+.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 379999999999999999999998764320 000127999999999999999999999998754 47999999999
Q ss_pred ccchhhhcC--------ChHHHHHHhCCccchhhhhhhhhhhcccceeEEEc-CcEEEecCCccCc
Q 001895 774 AADINALFG--------FRIECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRS 830 (999)
Q Consensus 774 ~~~~~~~~g--------f~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~ 830 (999)
.+.++...+ +. +....|... ...+.+.+.++|+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 988775433 22 222233221 2346678889999999998775 5799999998764
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-21 Score=206.00 Aligned_cols=164 Identities=20% Similarity=0.332 Sum_probs=114.0
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhh
Q 001895 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINA 779 (999)
Q Consensus 700 i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~ 779 (999)
++||||||||+..|.++|+++++.+..+ +++|||||||||++|+|||.+|++|+ .++++|+||||.+.+..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D-----~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~ 71 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKD-----RLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAV 71 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCC-----EEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHH
Confidence 5899999999999999999998764332 89999999999999999999999986 58999999999998887
Q ss_pred hcCChHH----HHHHhCCccchhhhhhhhhhhcccceeEEEcC-cEEEecCCccCcccCHHHhhhccCCcc----cCCCC
Q 001895 780 LFGFRIE----CIERMGERDGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPIT----MEAGS 850 (999)
Q Consensus 780 ~~gf~~e----~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~----~~~~~ 850 (999)
.+|+... ....+- .....+.+.+++..+|+...+++ ++++|||||+|.. ++++...+.+.++ .+...
T Consensus 72 ~~g~~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~~a~eve~~l~~~~~~ 147 (257)
T cd07422 72 AAGIKKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALKLAREVEAALRGPNYR 147 (257)
T ss_pred hcCccccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHH
Confidence 6664311 011110 01123567889999999988765 8999999999974 4444433333222 11111
Q ss_pred ceeeecccCCCCCCCCCCCCccCCCCCCceee
Q 001895 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTF 882 (999)
Q Consensus 851 ~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~f 882 (999)
.++..+.|+.|.. |..+..|.....|
T Consensus 148 ~~~~~my~~~p~~------W~~~l~g~~r~r~ 173 (257)
T cd07422 148 EFLKNMYGNEPDR------WSDDLTGIDRLRY 173 (257)
T ss_pred HHHHHhhCCCCcc------cCcccCccHHHHH
Confidence 2344445545532 6666555543333
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.3e-20 Score=194.64 Aligned_cols=123 Identities=23% Similarity=0.294 Sum_probs=92.2
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCC--ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGD--IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 701 ~vvGDiHG~~~~L~~il~~~g~~~~~~~--~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
+||||||||++.|.++|+.+++....+. ....++||||||||||++|.|||++|++++.. .++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 6999999999999999999987532100 00118999999999999999999999998644 4899999999999876
Q ss_pred hhcCC-h----------------HHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCcc
Q 001895 779 ALFGF-R----------------IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIG 828 (999)
Q Consensus 779 ~~~gf-~----------------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~ 828 (999)
...+. . .+..+.++. ....++.+.++|+.||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43321 0 112222221 123567788999999999766 47999999985
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=198.49 Aligned_cols=121 Identities=21% Similarity=0.363 Sum_probs=95.8
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
.++||||||||+..|.++|+++++.+..+ .++|||||||||++|+|||.+|+++ +.++++|+||||.+.+.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D-----~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~ 72 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKD-----TLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLA 72 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCC-----EEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHH
Confidence 58999999999999999999998754322 7999999999999999999999987 35799999999999888
Q ss_pred hhcCChHH----HHHHhCCccchhhhhhhhhhhcccceeEEE-cCcEEEecCCccCcc
Q 001895 779 ALFGFRIE----CIERMGERDGIWAWHRINRLFNWLPLAALI-EKKIICMHGGIGRSI 831 (999)
Q Consensus 779 ~~~gf~~e----~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~~~~ 831 (999)
..+|+... ....+- .....+.+.++++.||+...+ ++++++|||||+|..
T Consensus 73 ~~~g~~~~~~~~~l~~~l---~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 73 VAAGIKRNKKKDTLDPIL---EAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred hhcCCccccchhHHHHHH---ccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 77765321 111110 112345677889999998776 568999999999874
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-20 Score=197.65 Aligned_cols=127 Identities=24% Similarity=0.347 Sum_probs=100.7
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
.++||||||||++.|.++|+++++.+..+ +++|||||||||++|+|||.+|.+++ .++++|+||||.+.+.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D-----~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~ 72 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQD-----TLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLA 72 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCC-----EEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHH
Confidence 58999999999999999999998765432 79999999999999999999999874 4688999999999998
Q ss_pred hhcCCh-----HHHHHHhCCccchhhhhhhhhhhcccceeEEEc-CcEEEecCCccCcccCHHHhhh
Q 001895 779 ALFGFR-----IECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSINHVEQIEN 839 (999)
Q Consensus 779 ~~~gf~-----~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~~~~~~~i~~ 839 (999)
..+|+. +.....+. ....+.+.+++..+|+....+ .++++|||||.|.. ++++...
T Consensus 73 ~~~g~~~~~~~d~l~~~l~----a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~ 134 (279)
T TIGR00668 73 VFAGISRNKPKDRLDPLLE----APDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKE 134 (279)
T ss_pred HhcCCCccCchHHHHHHHH----ccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHH
Confidence 887762 12222121 124467789999999997654 47999999999985 4555443
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-19 Score=190.21 Aligned_cols=82 Identities=32% Similarity=0.479 Sum_probs=66.3
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC-CEEEecCCccccch
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN-NVHLIRGNHEAADI 777 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~-~v~llrGNHE~~~~ 777 (999)
.+++||||||+++.|.++|+.+.............+||||||||||++|.|||.+|++++..+|. .+++||||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 58999999999999999998764321100011126999999999999999999999999999986 68999999998876
Q ss_pred hhh
Q 001895 778 NAL 780 (999)
Q Consensus 778 ~~~ 780 (999)
...
T Consensus 83 ~fL 85 (304)
T cd07421 83 AFL 85 (304)
T ss_pred hHh
Confidence 543
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-19 Score=189.62 Aligned_cols=120 Identities=26% Similarity=0.336 Sum_probs=90.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
++++||||||||+..|+++|+.+++.+..+ +++|||||||||++|.|||.+|.+ .++++||||||.+.+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D-----~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l 85 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRD-----LLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMAL 85 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccC-----EEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHH
Confidence 489999999999999999999998753322 799999999999999999999976 268899999999988
Q ss_pred hhhcCChHHHHHHhCCc-------cchhhhhhhhhhhcccceeEEE---cCcEEEecCCcc
Q 001895 778 NALFGFRIECIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIG 828 (999)
Q Consensus 778 ~~~~gf~~e~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~ 828 (999)
+...+-....+...|.. .....+..+.++++.||+...+ ++++++||||++
T Consensus 86 ~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 86 DALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 76533211122222211 1122345666889999999765 357999999984
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.3e-19 Score=185.08 Aligned_cols=147 Identities=26% Similarity=0.333 Sum_probs=105.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
++|+|||||||++..|.++++.+++....+ .++|+|||||||+++.||+.+|.. ..+++||||||.+.+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d-----~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~ 69 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARD-----RLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAI 69 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCC-----EEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHH
Confidence 468999999999999999999987643221 799999999999999999999876 368999999999988
Q ss_pred hhhcC--ChHHHHHHhCCccc-----hhhhhhhhhhhcccceeEEEc---CcEEEecCCccCcccCHHHhhhccCCcccC
Q 001895 778 NALFG--FRIECIERMGERDG-----IWAWHRINRLFNWLPLAALIE---KKIICMHGGIGRSINHVEQIENLQRPITME 847 (999)
Q Consensus 778 ~~~~g--f~~e~~~~~g~~~~-----~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (999)
....+ +..+.+.+++.... ..+++.+.++|+.||+...++ .+++|||||+.+... ...+.. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~--~~~~-- 144 (207)
T cd07424 70 DALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA--VTLR-- 144 (207)
T ss_pred hHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc--cccC--
Confidence 87655 33445454443311 114456788999999998764 479999999965421 111110 1111
Q ss_pred CCCceeeecccCCCC
Q 001895 848 AGSIVLMDLLWSDPT 862 (999)
Q Consensus 848 ~~~~~~~dllWsDP~ 862 (999)
.....+++|+++.
T Consensus 145 --~~~~~~~~w~~~~ 157 (207)
T cd07424 145 --PEDIEELLWSRTR 157 (207)
T ss_pred --cccceeeeeccch
Confidence 1246678998765
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-18 Score=182.34 Aligned_cols=124 Identities=25% Similarity=0.371 Sum_probs=91.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccc
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (999)
++++||||||++..|.++++.+... +.+ .+||||||||||++|.||+.+|++++. .+.++++|+||||.+.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d------~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~ 74 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEE------TIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEF 74 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCC------EEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHH
Confidence 5899999999999999999988532 222 799999999999999999999999754 3568999999999987
Q ss_pred hhhhcCC-----h---------HHHHHHhCCccc---------------------------hhhhhhhhhhhcccceeEE
Q 001895 777 INALFGF-----R---------IECIERMGERDG---------------------------IWAWHRINRLFNWLPLAAL 815 (999)
Q Consensus 777 ~~~~~gf-----~---------~e~~~~~g~~~~---------------------------~~~~~~~~~~f~~LPlaa~ 815 (999)
++...+. . .+....||-... ...+..+..+++.||+...
T Consensus 75 l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~ 154 (235)
T PHA02239 75 YNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK 154 (235)
T ss_pred HHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE
Confidence 6543211 1 122344432110 0123455568889999977
Q ss_pred EcCcEEEecCCccCc
Q 001895 816 IEKKIICMHGGIGRS 830 (999)
Q Consensus 816 i~~~il~vHgGi~~~ 830 (999)
.+ +++|||||+.|.
T Consensus 155 ~~-~~ifVHAGi~p~ 168 (235)
T PHA02239 155 ED-KYIFSHSGGVSW 168 (235)
T ss_pred EC-CEEEEeCCCCCC
Confidence 65 799999999875
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.7e-18 Score=178.31 Aligned_cols=120 Identities=23% Similarity=0.244 Sum_probs=87.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
+++.||||||||+..|+++|+.+.+....+ .++|||||||||++|.|||.+|.+ .+++.||||||.+.+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d-----~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~ 83 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETD-----LLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMAL 83 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCC-----EEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHH
Confidence 489999999999999999999987543322 789999999999999999999864 378999999999988
Q ss_pred hhhcCChHHHHHHhCCcc-------chhhhhhhhhhhcccceeEEEc---CcEEEecCCcc
Q 001895 778 NALFGFRIECIERMGERD-------GIWAWHRINRLFNWLPLAALIE---KKIICMHGGIG 828 (999)
Q Consensus 778 ~~~~gf~~e~~~~~g~~~-------~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~ 828 (999)
.....-....+...|... .......+..+++.||+...+. .++++||||++
T Consensus 84 ~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 84 DAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 654321111121111110 0112234456889999997663 47899999984
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=164.59 Aligned_cols=281 Identities=19% Similarity=0.217 Sum_probs=210.5
Q ss_pred cCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCC--CcE
Q 001895 85 KEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT--NKW 162 (999)
Q Consensus 85 ~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t--~~W 162 (999)
..+.|.+--.-+-..+ ++.+||-=|. .-...|.+|+.. ..|
T Consensus 30 lPdlPvg~KnG~Ga~i------------g~~~YVGLGs-------------------------~G~afy~ldL~~~~k~W 72 (381)
T COG3055 30 LPDLPVGFKNGAGALI------------GDTVYVGLGS-------------------------AGTAFYVLDLKKPGKGW 72 (381)
T ss_pred CCCCCcccccccccee------------cceEEEEecc-------------------------CCccceehhhhcCCCCc
Confidence 3455666555555555 6788887774 233677888875 579
Q ss_pred EEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCC----CcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECC
Q 001895 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGL----SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238 (999)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~----~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~ 238 (999)
++++.. +-.+|.+..+++++++||+|||.+.... ..+|+|+||+.+++ |+++.+. .|....+|+++.+++
T Consensus 73 ~~~a~F--pG~~rnqa~~a~~~~kLyvFgG~Gk~~~~~~~~~nd~Y~y~p~~ns--W~kl~t~--sP~gl~G~~~~~~~~ 146 (381)
T COG3055 73 TKIADF--PGGARNQAVAAVIGGKLYVFGGYGKSVSSSPQVFNDAYRYDPSTNS--WHKLDTR--SPTGLVGASTFSLNG 146 (381)
T ss_pred eEcccC--CCcccccchheeeCCeEEEeeccccCCCCCceEeeeeEEecCCCCh--hheeccc--cccccccceeEecCC
Confidence 999987 4578999999999999999999864433 46899999999975 9999854 477789999999998
Q ss_pred cEEEEEccCC----------------------------------CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccce
Q 001895 239 RYLMAIGGND----------------------------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYA 284 (999)
Q Consensus 239 ~~Lyv~GG~~----------------------------------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~ 284 (999)
..+|++||.+ .......++.||+.++ +|+.+...+. -..+.
T Consensus 147 ~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n--~W~~~G~~pf---~~~aG 221 (381)
T COG3055 147 TKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN--QWRNLGENPF---YGNAG 221 (381)
T ss_pred ceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--hhhhcCcCcc---cCccC
Confidence 8999999963 1112557999999999 9998764433 24666
Q ss_pred EEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC------CcceeEEEEECCEEEEEcCcCCCC--
Q 001895 285 TASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS------PRYQHAAVFVNARLHVSGGALGGG-- 356 (999)
Q Consensus 285 ~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~------~R~~hsav~~~~~L~V~GG~~~~~-- 356 (999)
++++..++++.++-|+-..+.+...++.++...+ .-+|......+++ ...++-.-..++.++|.||.+..+
T Consensus 222 sa~~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~-~~~w~~l~~lp~~~~~~~eGvAGaf~G~s~~~~lv~GGAnF~Ga~ 300 (381)
T COG3055 222 SAVVIKGNKLTLINGEIKPGLRTAEVKQADFGGD-NLKWLKLSDLPAPIGSNKEGVAGAFSGKSNGEVLVAGGANFPGAL 300 (381)
T ss_pred cceeecCCeEEEEcceecCCccccceeEEEeccC-ceeeeeccCCCCCCCCCccccceeccceeCCeEEEecCCCChhHH
Confidence 7888889999999999888877888888877644 4566666544322 223333344578999999964321
Q ss_pred -------------CCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcC
Q 001895 357 -------------RMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423 (999)
Q Consensus 357 -------------~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG 423 (999)
..-...++||+|| .+.|..+..+ |.++++..++..++.||++||
T Consensus 301 ~~y~~Gk~~AH~Gl~K~w~~~Vy~~d--~g~Wk~~GeL---------------------p~~l~YG~s~~~nn~vl~IGG 357 (381)
T COG3055 301 KAYKNGKFYAHEGLSKSWNSEVYIFD--NGSWKIVGEL---------------------PQGLAYGVSLSYNNKVLLIGG 357 (381)
T ss_pred HHHHhcccccccchhhhhhceEEEEc--CCceeeeccc---------------------CCCccceEEEecCCcEEEEcc
Confidence 1112367899998 9999999888 678999999999999999999
Q ss_pred C-CCCcCcCcEEEee
Q 001895 424 L-RGGVLLDDLLVAE 437 (999)
Q Consensus 424 ~-~~~~~l~Dv~~ld 437 (999)
- +++..+.+++.+-
T Consensus 358 E~~~Gka~~~v~~l~ 372 (381)
T COG3055 358 ETSGGKATTRVYSLS 372 (381)
T ss_pred ccCCCeeeeeEEEEE
Confidence 4 4668888888764
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-15 Score=164.45 Aligned_cols=317 Identities=17% Similarity=0.260 Sum_probs=208.7
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEe
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l 165 (999)
...|.-|.||.++.... .+.||++||.++.. .+.|+|.|....+.|..+
T Consensus 255 ~~~p~~RgGHQMV~~~~----------~~CiYLYGGWdG~~---------------------~l~DFW~Y~v~e~~W~~i 303 (723)
T KOG2437|consen 255 DNRPGMRGGHQMVIDVQ----------TECVYLYGGWDGTQ---------------------DLADFWAYSVKENQWTCI 303 (723)
T ss_pred ccCccccCcceEEEeCC----------CcEEEEecCcccch---------------------hHHHHHhhcCCcceeEEe
Confidence 46899999999999853 56999999998876 788999999999999999
Q ss_pred cCCCCCCCCCcCcEEEEeCC--EEEEEcccCCCC-----CCcCcEEEEecCCCCCceEEEeec---CCCCCCCcccEEEE
Q 001895 166 TPFGEPPTPRAAHVATAVGT--MVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMAL 235 (999)
Q Consensus 166 ~~~g~~P~pR~~hsa~~~g~--~iyv~GG~~~~~-----~~~~dv~vyD~~t~t~kW~~v~~~---g~~P~~R~~h~~~v 235 (999)
...+..|..|..|-++.... ++|+.|-+-+.. ..-.|+|+||+++++ |+.+.-. ...|..-+.|.|++
T Consensus 304 N~~t~~PG~RsCHRMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~~--W~~ls~dt~~dGGP~~vfDHqM~V 381 (723)
T KOG2437|consen 304 NRDTEGPGARSCHRMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTNT--WMLLSEDTAADGGPKLVFDHQMCV 381 (723)
T ss_pred ecCCCCCcchhhhhhhhhhhHhHHhhhhhccccccccccccccceEEEecCCce--eEEecccccccCCcceeecceeeE
Confidence 98888999999999999876 999999864332 234799999999976 9887632 23688999999999
Q ss_pred ECCc-EEEEEccCCC--C-CCCCeEEEEECCCCCceEEEcccCCCC-------CCCccceEEE-EEeCCEEEEEeccCCC
Q 001895 236 VGQR-YLMAIGGNDG--K-RPLADVWALDTAAKPYEWRKLEPEGEG-------PPPCMYATAS-ARSDGLLLLCGGRDAS 303 (999)
Q Consensus 236 ~~~~-~Lyv~GG~~g--~-~~~ndv~~yDl~s~~~~W~~v~~~~~~-------P~~r~~~~a~-~~~~~~LyvfGG~~~~ 303 (999)
.++. .+|||||..- . ..+.-++.||+... .|..+...... -..|.+|.+- ...+.++|+|||....
T Consensus 382 d~~k~~iyVfGGr~~~~~e~~f~GLYaf~~~~~--~w~~l~e~~~~~~~vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~ 459 (723)
T KOG2437|consen 382 DSEKHMIYVFGGRILTCNEPQFSGLYAFNCQCQ--TWKLLREDSCNAGPVVEDIQSRIGHCMEFHSKNRCLYVFGGQRSK 459 (723)
T ss_pred ecCcceEEEecCeeccCCCccccceEEEecCCc--cHHHHHHHHhhcCcchhHHHHHHHHHHHhcCCCCeEEeccCcccc
Confidence 9872 3999999842 2 34788999999998 89876432210 1113333332 2345789999997554
Q ss_pred CCCcccEEEEecCCCCeEE----EEECCCCCCCCcceeEEEEE---CCEEEEEcCcCCCCCC--cccCCeEEEEECCCCe
Q 001895 304 SVPLASAYGLAKHRDGRWE----WAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRM--VEDSSSVAVLDTAAGV 374 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~----w~~~~g~~P~~R~~hsav~~---~~~L~V~GG~~~~~~~--~~~~~~v~vyD~~t~~ 374 (999)
. .++-.+.|+....+.=. -.....+.|.+-.. .-++. ...|++.-|......- ....+++|+|+..+..
T Consensus 460 ~-El~L~f~y~I~~E~~~~~s~~~k~dsS~~pS~~f~-qRs~~dp~~~~i~~~~G~~~~~~~~e~~~rns~wi~~i~~~~ 537 (723)
T KOG2437|consen 460 T-ELNLFFSYDIDSEHVDIISDGTKKDSSMVPSTGFT-QRATIDPELNEIHVLSGLSKDKEKREENVRNSFWIYDIVRNS 537 (723)
T ss_pred e-EEeehhcceeccccchhhhccCcCccccCCCcchh-hhcccCCCCcchhhhcccchhccCccccccCcEEEEEecccc
Confidence 3 23334444332110000 00011222322111 11222 3578888787532211 1236889999999999
Q ss_pred EEEcccCcCCCCCCCcccccC---CCCCccCCCCcceeEEEEE--CCEEEEEcCCCCC-----cCcCcEEEeecc
Q 001895 375 WCDTKSVVTSPRTGRYSADAA---GGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGG-----VLLDDLLVAEDL 439 (999)
Q Consensus 375 W~~v~~~~~~p~~~~~~~~~~---~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~-----~~l~Dv~~ld~~ 439 (999)
|..+.....-.........+. .-+....+.+|+.|+.++. ..-+|.+||..+. ..++|.|.++.-
T Consensus 538 w~cI~~I~~~~~d~dtvfsvpFp~ks~~~~~~~~rf~h~~~~dL~~~~~yl~Ggn~~~~~~~~m~l~dfW~l~I~ 612 (723)
T KOG2437|consen 538 WSCIYKIDQAAKDNDTVFSVPFPTKSLQEEEPCPRFAHQLVYDLLHKVHYLFGGNPGKSCSPKMRLDDFWSLKIC 612 (723)
T ss_pred hhhHhhhHHhhccCCceeeccCCcccccceeccccchhHHHHHHhhhhhhhhcCCCCCCCCchhhhhhHHHHhhc
Confidence 998765421100000000000 1122345888998887654 5678999997643 457888887654
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.6e-12 Score=135.87 Aligned_cols=236 Identities=21% Similarity=0.327 Sum_probs=165.6
Q ss_pred CCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecC
Q 001895 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (999)
Q Consensus 88 ~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~ 167 (999)
+-.+|-+.+++.+ +++||||||....... ....++|+|+||+.+++|.++..
T Consensus 79 pG~~rnqa~~a~~------------~~kLyvFgG~Gk~~~~----------------~~~~~nd~Y~y~p~~nsW~kl~t 130 (381)
T COG3055 79 PGGARNQAVAAVI------------GGKLYVFGGYGKSVSS----------------SPQVFNDAYRYDPSTNSWHKLDT 130 (381)
T ss_pred CCcccccchheee------------CCeEEEeeccccCCCC----------------CceEeeeeEEecCCCChhheecc
Confidence 3467888888888 7999999998765531 11289999999999999999998
Q ss_pred CCCCCCCCcCcEEEEeCC-EEEEEcccCCC---------------------------------CCCcCcEEEEecCCCCC
Q 001895 168 FGEPPTPRAAHVATAVGT-MVVIQGGIGPA---------------------------------GLSAEDLHVLDLTQQRP 213 (999)
Q Consensus 168 ~g~~P~pR~~hsa~~~g~-~iyv~GG~~~~---------------------------------~~~~~dv~vyD~~t~t~ 213 (999)
. .|....+|+++.+++ +||++||.+.. ......++.||+.++
T Consensus 131 ~--sP~gl~G~~~~~~~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n-- 206 (381)
T COG3055 131 R--SPTGLVGASTFSLNGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN-- 206 (381)
T ss_pred c--cccccccceeEecCCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--
Confidence 7 477789999999988 99999996421 011467888999886
Q ss_pred ceEEEeecCCCC-CCCcccEEEEECCcEEEEEccC-CCCCCCCeEEEEECCCCCceEEEcccCCCCCCCc---cceEEEE
Q 001895 214 RWHRVVVQGPGP-GPRYGHVMALVGQRYLMAIGGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPC---MYATASA 288 (999)
Q Consensus 214 kW~~v~~~g~~P-~~R~~h~~~v~~~~~Lyv~GG~-~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r---~~~~a~~ 288 (999)
+|..+- ..| .++++++. +..++++.++-|. -..-+...+++++...+..+|..+...+.+.... .......
T Consensus 207 ~W~~~G---~~pf~~~aGsa~-~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~~~~w~~l~~lp~~~~~~~eGvAGaf~G 282 (381)
T COG3055 207 QWRNLG---ENPFYGNAGSAV-VIKGNKLTLINGEIKPGLRTAEVKQADFGGDNLKWLKLSDLPAPIGSNKEGVAGAFSG 282 (381)
T ss_pred hhhhcC---cCcccCccCcce-eecCCeEEEEcceecCCccccceeEEEeccCceeeeeccCCCCCCCCCccccceeccc
Confidence 498774 455 57777555 4455577777775 3334567888999987777999996665432222 2222334
Q ss_pred EeCCEEEEEeccCCC------------------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEc
Q 001895 289 RSDGLLLLCGGRDAS------------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350 (999)
Q Consensus 289 ~~~~~LyvfGG~~~~------------------~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~G 350 (999)
..++.+++.||..-. ..-..++|.|+ ++.|+ .+ +..|.++....++..++.||++|
T Consensus 283 ~s~~~~lv~GGAnF~Ga~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d---~g~Wk--~~-GeLp~~l~YG~s~~~nn~vl~IG 356 (381)
T COG3055 283 KSNGEVLVAGGANFPGALKAYKNGKFYAHEGLSKSWNSEVYIFD---NGSWK--IV-GELPQGLAYGVSLSYNNKVLLIG 356 (381)
T ss_pred eeCCeEEEecCCCChhHHHHHHhcccccccchhhhhhceEEEEc---CCcee--ee-cccCCCccceEEEecCCcEEEEc
Confidence 557888998984211 11235677776 34554 33 44577888888888999999999
Q ss_pred CcCCCCCCcccCCeEEEE
Q 001895 351 GALGGGRMVEDSSSVAVL 368 (999)
Q Consensus 351 G~~~~~~~~~~~~~v~vy 368 (999)
|.+..+.. ...|+.+
T Consensus 357 GE~~~Gka---~~~v~~l 371 (381)
T COG3055 357 GETSGGKA---TTRVYSL 371 (381)
T ss_pred cccCCCee---eeeEEEE
Confidence 99877653 3445444
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.4e-12 Score=141.66 Aligned_cols=210 Identities=20% Similarity=0.353 Sum_probs=156.1
Q ss_pred CCceEEEeecC-------CCCCCCcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccc
Q 001895 212 RPRWHRVVVQG-------PGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (999)
Q Consensus 212 t~kW~~v~~~g-------~~P~~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~ 283 (999)
+.+|++++... ..|..|.+|-|+.-. ++++|+.||++|...+.|+|.|+...+ .|+.+......|..|.+
T Consensus 238 ~~~W~~i~~~~~~~~~~~~~p~~RgGHQMV~~~~~~CiYLYGGWdG~~~l~DFW~Y~v~e~--~W~~iN~~t~~PG~RsC 315 (723)
T KOG2437|consen 238 KPRWSQIIPKSTKGDGEDNRPGMRGGHQMVIDVQTECVYLYGGWDGTQDLADFWAYSVKEN--QWTCINRDTEGPGARSC 315 (723)
T ss_pred cccccccCchhhcccccccCccccCcceEEEeCCCcEEEEecCcccchhHHHHHhhcCCcc--eeEEeecCCCCCcchhh
Confidence 46799988654 578999999998764 359999999999999999999999999 99999998888999999
Q ss_pred eEEEEE-eCCEEEEEeccCCCC-----CCcccEEEEecCCCCeEEEEECCC---CCCCCcceeEEEEECCE--EEEEcCc
Q 001895 284 ATASAR-SDGLLLLCGGRDASS-----VPLASAYGLAKHRDGRWEWAIAPG---VSPSPRYQHAAVFVNAR--LHVSGGA 352 (999)
Q Consensus 284 ~~a~~~-~~~~LyvfGG~~~~~-----~~~~d~~~~~~~~~~~W~w~~~~g---~~P~~R~~hsav~~~~~--L~V~GG~ 352 (999)
|-++.- ...+||+.|-.-+.. ..-.|.|.||..++ .|....... --|..-+.|.+++.+.+ +||+||.
T Consensus 316 HRMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~-~W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGGr 394 (723)
T KOG2437|consen 316 HRMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTN-TWMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGGR 394 (723)
T ss_pred hhhhhhhhHhHHhhhhhccccccccccccccceEEEecCCc-eeEEecccccccCCcceeecceeeEecCcceEEEecCe
Confidence 888764 346999998753322 24578999999887 554443321 12677899999999887 9999998
Q ss_pred CCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCCcCc
Q 001895 353 LGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLL 430 (999)
Q Consensus 353 ~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~~~l 430 (999)
..... ......+|.||+....|..+..--+ .-+...+.-..|-+|++-.. +..+|+|||.+....+
T Consensus 395 ~~~~~-e~~f~GLYaf~~~~~~w~~l~e~~~-----------~~~~vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~~El 462 (723)
T KOG2437|consen 395 ILTCN-EPQFSGLYAFNCQCQTWKLLREDSC-----------NAGPVVEDIQSRIGHCMEFHSKNRCLYVFGGQRSKTEL 462 (723)
T ss_pred eccCC-CccccceEEEecCCccHHHHHHHHh-----------hcCcchhHHHHHHHHHHHhcCCCCeEEeccCcccceEE
Confidence 64332 1226789999999999998765411 11112233467888887665 6689999997766544
Q ss_pred CcEEEe
Q 001895 431 DDLLVA 436 (999)
Q Consensus 431 ~Dv~~l 436 (999)
+=...+
T Consensus 463 ~L~f~y 468 (723)
T KOG2437|consen 463 NLFFSY 468 (723)
T ss_pred eehhcc
Confidence 444333
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.6e-09 Score=105.89 Aligned_cols=78 Identities=29% Similarity=0.399 Sum_probs=57.2
Q ss_pred CeEEEecCCCCHHHH---HHHH-HHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHH--HHhhhcCCCCEEEecCCc
Q 001895 699 PIKIFGDLHGQFGDL---MRLF-DEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLL--LALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L---~~il-~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll--~~lk~~~P~~v~llrGNH 772 (999)
+|++|||+|+..... .+.+ ........+ -+|++||++|+|..+.+..... +..+...+..+++++|||
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPD------FIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTS------EEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCC------EEEeeccccccccccccchhhhccchhhhhcccccccccccc
Confidence 589999999999987 3333 332222222 6899999999999988887765 555566677999999999
Q ss_pred cccchhhhcC
Q 001895 773 EAADINALFG 782 (999)
Q Consensus 773 E~~~~~~~~g 782 (999)
|.......+.
T Consensus 76 D~~~~~~~~~ 85 (200)
T PF00149_consen 76 DYYSGNSFYG 85 (200)
T ss_dssp SSHHHHHHHH
T ss_pred ccceeccccc
Confidence 9987665443
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.8e-09 Score=102.27 Aligned_cols=147 Identities=35% Similarity=0.484 Sum_probs=118.7
Q ss_pred chhhhcCChHHHHHHhCCccchhhhhh---hhhhhcccceeEEEcC-cEEEecCCccCcc-cCHHHhhhccCCc--ccCC
Q 001895 776 DINALFGFRIECIERMGERDGIWAWHR---INRLFNWLPLAALIEK-KIICMHGGIGRSI-NHVEQIENLQRPI--TMEA 848 (999)
Q Consensus 776 ~~~~~~gf~~e~~~~~g~~~~~~~~~~---~~~~f~~LPlaa~i~~-~il~vHgGi~~~~-~~~~~i~~i~rp~--~~~~ 848 (999)
.+...+|+.++|...++.. ..|.. +.++|+.||+.+++++ .++|.|+++++.+ ..+++++.+.|.. .+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 78 (155)
T COG0639 2 LLTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPH 78 (155)
T ss_pred hhhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCC
Confidence 4566788888888877653 34655 9999999999999988 9999999999976 6778888877765 3333
Q ss_pred CCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccC
Q 001895 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYC 928 (999)
Q Consensus 849 ~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~ 928 (999)
.+ ...+.+|+++... ....|.+..||.+. .| .+....|+..+....+.|+|+.+..++....++..+|+|++++||
T Consensus 79 ~g-~~~~~~~~~~~~~-~~~~w~~~~~g~~~-~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 79 AG-HTHDLLWSDPDGG-DRRIWNPGPRGVPR-DG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cc-ccccccCCCCCCC-cccccccCCCCCCc-cc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 33 5666699998752 25779999999983 34 688889998898888999999999999988777899999999997
Q ss_pred C
Q 001895 929 G 929 (999)
Q Consensus 929 ~ 929 (999)
.
T Consensus 155 ~ 155 (155)
T COG0639 155 Y 155 (155)
T ss_pred C
Confidence 3
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.1e-08 Score=110.19 Aligned_cols=92 Identities=17% Similarity=0.315 Sum_probs=78.7
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
+.|-.+.||.+||++.+ ++++|||||.+.... ..+++|+||..|.+|.
T Consensus 17 ~~~~~~~~~~~~tav~i------------gdk~yv~GG~~d~~~--------------------~~~~v~i~D~~t~~W~ 64 (398)
T PLN02772 17 TNGFGVKPKNRETSVTI------------GDKTYVIGGNHEGNT--------------------LSIGVQILDKITNNWV 64 (398)
T ss_pred ccCccCCCCCcceeEEE------------CCEEEEEcccCCCcc--------------------ccceEEEEECCCCcEe
Confidence 34456779999999999 799999999876432 6789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeC-CEEEEEcccCCCCCCcCcEEEEecCC
Q 001895 164 RITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQ 210 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g-~~iyv~GG~~~~~~~~~dv~vyD~~t 210 (999)
.....|.+|.||.+|++++++ ++|+|+++..+. .+++|.+.+++
T Consensus 65 ~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~---~~~~w~l~~~t 109 (398)
T PLN02772 65 SPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAP---DDSIWFLEVDT 109 (398)
T ss_pred cccccCCCCCCCCcceEEEECCceEEEEeCCCCC---ccceEEEEcCC
Confidence 999999999999999999996 599999875433 48999999887
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.5e-08 Score=79.47 Aligned_cols=50 Identities=42% Similarity=0.823 Sum_probs=44.0
Q ss_pred CCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCC
Q 001895 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGE 170 (999)
Q Consensus 91 pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~ 170 (999)
||.+|+++++ +++||||||...... .++++++||+.+++|+.++++
T Consensus 1 pR~~~s~v~~------------~~~iyv~GG~~~~~~--------------------~~~~v~~yd~~t~~W~~~~~m-- 46 (50)
T PF13964_consen 1 PRYGHSAVVV------------GGKIYVFGGYDNSGK--------------------YSNDVERYDPETNTWEQLPPM-- 46 (50)
T ss_pred CCccCEEEEE------------CCEEEEECCCCCCCC--------------------ccccEEEEcCCCCcEEECCCC--
Confidence 7999999999 789999999987421 889999999999999999877
Q ss_pred CCCCC
Q 001895 171 PPTPR 175 (999)
Q Consensus 171 ~P~pR 175 (999)
|.||
T Consensus 47 -p~pR 50 (50)
T PF13964_consen 47 -PTPR 50 (50)
T ss_pred -CCCC
Confidence 6776
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.71 E-value=3e-08 Score=79.81 Aligned_cols=50 Identities=32% Similarity=0.615 Sum_probs=45.5
Q ss_pred CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 174 PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 174 pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
||.+|++++++++|||+||........+++++||+.+++ |+.++ +||.+|
T Consensus 1 pR~~~s~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~---~mp~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVVGGKIYVFGGYDNSGKYSNDVERYDPETNT--WEQLP---PMPTPR 50 (50)
T ss_pred CCccCEEEEECCEEEEECCCCCCCCccccEEEEcCCCCc--EEECC---CCCCCC
Confidence 699999999999999999997767788999999999964 99998 899887
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.5e-08 Score=109.35 Aligned_cols=89 Identities=18% Similarity=0.412 Sum_probs=78.8
Q ss_pred CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCC
Q 001895 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251 (999)
Q Consensus 172 P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~ 251 (999)
+.|+..|+++++++++||+||.++.+...+++|+||..+.+ |..+.+.|..|.+|.+|++|++++.+|+|+++..+..
T Consensus 22 ~~~~~~~tav~igdk~yv~GG~~d~~~~~~~v~i~D~~t~~--W~~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~~ 99 (398)
T PLN02772 22 VKPKNRETSVTIGDKTYVIGGNHEGNTLSIGVQILDKITNN--WVSPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAPD 99 (398)
T ss_pred CCCCCcceeEEECCEEEEEcccCCCccccceEEEEECCCCc--EecccccCCCCCCCCcceEEEECCceEEEEeCCCCCc
Confidence 56899999999999999999988766578999999999964 9999999999999999999999888999998765543
Q ss_pred CCCeEEEEECCCC
Q 001895 252 PLADVWALDTAAK 264 (999)
Q Consensus 252 ~~ndv~~yDl~s~ 264 (999)
.++|.+.+.|.
T Consensus 100 --~~~w~l~~~t~ 110 (398)
T PLN02772 100 --DSIWFLEVDTP 110 (398)
T ss_pred --cceEEEEcCCH
Confidence 78999988774
|
|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.8e-08 Score=77.45 Aligned_cols=49 Identities=43% Similarity=0.814 Sum_probs=41.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV 183 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~ 183 (999)
+++||||||....... .++|+|+||+.+++|+++ ++.|.+|.+|+++++
T Consensus 1 g~~~~vfGG~~~~~~~-------------------~~nd~~~~~~~~~~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGT-------------------RLNDVWVFDLDTNTWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCC-------------------EecCEEEEECCCCEEEEC---CCCCCCccceEEEEC
Confidence 4789999999842221 889999999999999999 446999999999974
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=98.01 Aligned_cols=68 Identities=19% Similarity=0.331 Sum_probs=53.2
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC--------hHHHHHHHHHhhhcCCCCEEEecC
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH--------SLETITLLLALKVEYPNNVHLIRG 770 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~--------s~evl~ll~~lk~~~P~~v~llrG 770 (999)
+|.|++|+||++..|.++++.+.....+ .++++||++|+|+. ..|++.+|..+ ...+++++|
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d------~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~G 71 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGAD------WLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRG 71 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCC------EEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEcc
Confidence 6899999999999999999887433333 79999999999873 45677766544 246999999
Q ss_pred Cccccc
Q 001895 771 NHEAAD 776 (999)
Q Consensus 771 NHE~~~ 776 (999)
|||...
T Consensus 72 NhD~~~ 77 (182)
T PRK09453 72 NCDSEV 77 (182)
T ss_pred CCcchh
Confidence 999743
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-06 Score=88.26 Aligned_cols=60 Identities=30% Similarity=0.498 Sum_probs=44.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccc
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (999)
+|.++||+|++...+.++++.+.- .+ .+|++||++|+ .+++.++..+ .+++++||||...
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~~~--~d------~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYINE--PD------FVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHHTT--ES------EEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred EEEEEeCCCCChhHHHHHHHHhcC--CC------EEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 689999999999999999999832 22 68889999993 7777777555 6999999999643
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.3e-07 Score=92.21 Aligned_cols=59 Identities=24% Similarity=0.400 Sum_probs=47.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
+|.+++|+||++..+.++++.+.. .+ .++++||+++++.... ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d------~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD------LIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC------EEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 478999999999999999998754 22 7899999999998755 122 24699999999984
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.3e-07 Score=73.49 Aligned_cols=48 Identities=33% Similarity=0.704 Sum_probs=41.9
Q ss_pred CCEEEEEcccC-CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE
Q 001895 184 GTMVVIQGGIG-PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (999)
Q Consensus 184 g~~iyv~GG~~-~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~ 236 (999)
|++||||||.+ .....++|+|+||+.+. +|+++ +++|.+|++|+++++
T Consensus 1 g~~~~vfGG~~~~~~~~~nd~~~~~~~~~--~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGTRLNDVWVFDLDTN--TWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCCEecCEEEEECCCC--EEEEC---CCCCCCccceEEEEC
Confidence 57999999998 46777899999999886 59988 589999999999864
|
|
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.8e-07 Score=74.97 Aligned_cols=47 Identities=28% Similarity=0.678 Sum_probs=30.6
Q ss_pred CCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCC
Q 001895 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168 (999)
Q Consensus 91 pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~ 168 (999)
||++|+++.+. +++||||||...... .++|+|+||+.+++|+++.++
T Consensus 1 pR~~h~~~~~~-----------~~~i~v~GG~~~~~~--------------------~~~d~~~~d~~~~~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIG-----------DNSIYVFGGRDSSGS--------------------PLNDLWIFDIETNTWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE------------TTEEEEE--EEE-TE--------------------E---EEEEETTTTEEEE--SS
T ss_pred CcceEEEEEEe-----------CCeEEEECCCCCCCc--------------------ccCCEEEEECCCCEEEECCCC
Confidence 79999999984 479999999876532 899999999999999999544
|
|
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.4e-07 Score=72.21 Aligned_cols=47 Identities=34% Similarity=0.620 Sum_probs=39.8
Q ss_pred CcceeEEEEECCEEEEEcCc-CCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 333 PRYQHAAVFVNARLHVSGGA-LGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 333 ~R~~hsav~~~~~L~V~GG~-~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
+|+.|++++++++|||+||+ .... ....+++++||+++.+|+.+..+
T Consensus 1 ~r~~hs~~~~~~kiyv~GG~~~~~~--~~~~~~v~~~d~~t~~W~~~~~~ 48 (49)
T PF07646_consen 1 PRYGHSAVVLDGKIYVFGGYGTDNG--GSSSNDVWVFDTETNQWTELSPM 48 (49)
T ss_pred CccceEEEEECCEEEEECCcccCCC--CcccceeEEEECCCCEEeecCCC
Confidence 68999999999999999999 2111 23489999999999999998876
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.2e-07 Score=74.43 Aligned_cols=46 Identities=35% Similarity=0.850 Sum_probs=30.5
Q ss_pred CCcccEEEEECCcEEEEEccCCCC-CCCCeEEEEECCCCCceEEEcccC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEPE 274 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~-~~~ndv~~yDl~s~~~~W~~v~~~ 274 (999)
||++|+++.+++++||||||.+.. ..++|+|+||+.++ +|+++.++
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~--~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIETN--TWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTTT--EEEE--SS
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCCC--EEEECCCC
Confidence 699999999975699999999876 58999999999999 99999443
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.3e-06 Score=85.83 Aligned_cols=118 Identities=22% Similarity=0.265 Sum_probs=77.5
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcCCCCEEEecCCccccc
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (999)
+|.+++|+||++. .+ .....+ .+|++||++++|.... +.+.++..++ .| .++++.||||...
T Consensus 1 ~i~~isD~H~~~~----~~---~~~~~D------~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~ 64 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SIPDGD------VLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTL 64 (135)
T ss_pred CEEEEeCCCCCCC----cC---cCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcC
Confidence 4789999999987 11 112222 6888999999986532 3444444432 22 3678999999631
Q ss_pred hhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeec
Q 001895 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDL 856 (999)
Q Consensus 777 ~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dl 856 (999)
. .-+.+++++||.+.... +.
T Consensus 65 ~-------------------------------------~~~~~ilv~H~~p~~~~-----------------------~~ 84 (135)
T cd07379 65 D-------------------------------------PEDTDILVTHGPPYGHL-----------------------DL 84 (135)
T ss_pred C-------------------------------------CCCCEEEEECCCCCcCc-----------------------cc
Confidence 1 12347899999642210 00
Q ss_pred ccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceE
Q 001895 857 LWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (999)
Q Consensus 857 lWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (999)
++ . . ..+|.+.+.+++++.+.+++|-||.-.+.|++
T Consensus 85 ~~----------~--------~-~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 85 VS----------S--------G-QRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred cc----------c--------C-cccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 00 0 0 23577889999999999999999999888876
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-06 Score=70.42 Aligned_cols=46 Identities=37% Similarity=0.862 Sum_probs=41.2
Q ss_pred CCcccEEEEECCcEEEEEccC---CCCCCCCeEEEEECCCCCceEEEcccCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGN---DGKRPLADVWALDTAAKPYEWRKLEPEG 275 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~---~g~~~~ndv~~yDl~s~~~~W~~v~~~~ 275 (999)
+|++|+++++++ +||||||. +.....+++++||+++. +|+.+++++
T Consensus 1 ~r~~hs~~~~~~-kiyv~GG~~~~~~~~~~~~v~~~d~~t~--~W~~~~~~g 49 (49)
T PF07646_consen 1 PRYGHSAVVLDG-KIYVFGGYGTDNGGSSSNDVWVFDTETN--QWTELSPMG 49 (49)
T ss_pred CccceEEEEECC-EEEEECCcccCCCCcccceeEEEECCCC--EEeecCCCC
Confidence 699999999998 99999999 55667999999999999 999998763
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-06 Score=92.33 Aligned_cols=113 Identities=23% Similarity=0.238 Sum_probs=73.5
Q ss_pred CeEEEecCCCCHHHHH-HHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 699 PIKIFGDLHGQFGDLM-RLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~-~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
+|.++|||||++.... +.++..+ .+ .+||+||+++. +.+++..|..+ +..+++++||||.+..
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~---pD------~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ---PD------LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC---CC------EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 5899999999987643 3443332 12 68999999864 57777776554 2358999999997543
Q ss_pred hhh---cC-----------------------------------------C-hHHHHHHhCCccchhhhhhhhhhhcccce
Q 001895 778 NAL---FG-----------------------------------------F-RIECIERMGERDGIWAWHRINRLFNWLPL 812 (999)
Q Consensus 778 ~~~---~g-----------------------------------------f-~~e~~~~~g~~~~~~~~~~~~~~f~~LPl 812 (999)
... +. + ..++...|+- ...++.+..+++.++.
T Consensus 66 ~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi---~s~~eA~~~ive~~~~ 142 (238)
T cd07397 66 ATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGV---ISLEESAQRIIAAAKK 142 (238)
T ss_pred ccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCC---CCHHHHHHHHHHHhhh
Confidence 200 00 0 1245555652 2456777777888864
Q ss_pred eEEEcCcEEEecCCccCc
Q 001895 813 AALIEKKIICMHGGIGRS 830 (999)
Q Consensus 813 aa~i~~~il~vHgGi~~~ 830 (999)
+......||+.|+++...
T Consensus 143 ~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 143 APPDLPLILLAHNGPSGL 160 (238)
T ss_pred cCCCCCeEEEeCcCCcCC
Confidence 444445799999998654
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=4e-06 Score=89.37 Aligned_cols=71 Identities=11% Similarity=0.178 Sum_probs=56.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+|.+++||||++..|.++++.+.....+ .+|++||++++|...-++..++..|... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D------~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGAD------AIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 35899999999999999999876322223 6899999999997777777777666433 34699999999975
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.3e-07 Score=70.61 Aligned_cols=45 Identities=38% Similarity=0.753 Sum_probs=41.1
Q ss_pred CCcccEEEEECCcEEEEEccCCC-CCCCCeEEEEECCCCCceEEEcccC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKLEPE 274 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g-~~~~ndv~~yDl~s~~~~W~~v~~~ 274 (999)
+|++|+++++++ +|||+||.++ ...++++++||+.++ +|+.++++
T Consensus 1 pR~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~m 46 (47)
T PF01344_consen 1 PRSGHAAVVVGN-KIYVIGGYDGNNQPTNSVEVYDPETN--TWEELPPM 46 (47)
T ss_dssp -BBSEEEEEETT-EEEEEEEBESTSSBEEEEEEEETTTT--EEEEEEEE
T ss_pred CCccCEEEEECC-EEEEEeeecccCceeeeEEEEeCCCC--EEEEcCCC
Confidence 689999999998 8999999988 778999999999999 99998775
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.3e-06 Score=86.62 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=46.7
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCC-CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~-~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
++.|++|+||++..+..+++..... ..+ .++++||++ +.+++.+|..+. ..++.++||||.
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVD------LVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCC------EEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 5899999999998777766665443 223 688999999 467777776542 259999999998
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1e-06 Score=69.76 Aligned_cols=44 Identities=25% Similarity=0.532 Sum_probs=40.1
Q ss_pred CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe
Q 001895 174 PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (999)
Q Consensus 174 pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~ 219 (999)
||.+|++++++++|||+||.......++++++||+.++ +|+.++
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~ 44 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGNNQPTNSVEVYDPETN--TWEELP 44 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBESTSSBEEEEEEEETTTT--EEEEEE
T ss_pred CCccCEEEEECCEEEEEeeecccCceeeeEEEEeCCCC--EEEEcC
Confidence 69999999999999999999887788999999999996 599998
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.6e-06 Score=67.05 Aligned_cols=40 Identities=40% Similarity=0.578 Sum_probs=36.2
Q ss_pred CCCCCcCcEEEEeCCEEEEEcccC-CCCCCcCcEEEEecCC
Q 001895 171 PPTPRAAHVATAVGTMVVIQGGIG-PAGLSAEDLHVLDLTQ 210 (999)
Q Consensus 171 ~P~pR~~hsa~~~g~~iyv~GG~~-~~~~~~~dv~vyD~~t 210 (999)
.|.+|.+|++++++++||||||.. ......+|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGNNIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECCEEEEEcCccCCCCCEECcEEEEECCC
Confidence 489999999999999999999998 3677889999999876
|
|
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.4e-06 Score=66.09 Aligned_cols=39 Identities=36% Similarity=0.701 Sum_probs=35.2
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCC--CCCCCeEEEEECCC
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDTAA 263 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g--~~~~ndv~~yDl~s 263 (999)
+|.+|++|+++++++ +|||+||.++ ...++|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~-~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGN-NIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECC-EEEEEcCccCCCCCEECcEEEEECCC
Confidence 489999999999997 8999999984 66799999999976
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.5e-05 Score=76.32 Aligned_cols=67 Identities=27% Similarity=0.394 Sum_probs=49.0
Q ss_pred EEEecCCCCHHHHHHHH--HHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 701 KIFGDLHGQFGDLMRLF--DEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 701 ~vvGDiHG~~~~L~~il--~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
+++||+|+......... ........+ .+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~------~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPD------FVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCC------EEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999999988865 222111112 68899999999998877766544444455578999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0011 Score=70.69 Aligned_cols=110 Identities=19% Similarity=0.283 Sum_probs=75.5
Q ss_pred EEEEEcccCCCCCCcCcEEEEecCCCC-Cc-----eEEEeecCCCCCCCcccEEEEE---CCcEEEEEccCCC-------
Q 001895 186 MVVIQGGIGPAGLSAEDLHVLDLTQQR-PR-----WHRVVVQGPGPGPRYGHVMALV---GQRYLMAIGGNDG------- 249 (999)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~vyD~~t~t-~k-----W~~v~~~g~~P~~R~~h~~~v~---~~~~Lyv~GG~~g------- 249 (999)
.-+|.||..+....++.+|++.+.+.. ++ ...-...|+.|.+||+|++.++ +....++|||..-
T Consensus 40 ~YlIHGGrTPNNElS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRT 119 (337)
T PF03089_consen 40 QYLIHGGRTPNNELSSSLYILSVDSRGCNKKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRT 119 (337)
T ss_pred eEEecCCcCCCcccccceEEEEeecCCCCceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccc
Confidence 566789999988889999999888653 22 2333457999999999999887 3347899999731
Q ss_pred -------CCCCCeEEEEECCCCCceEEEc--ccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001895 250 -------KRPLADVWALDTAAKPYEWRKL--EPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (999)
Q Consensus 250 -------~~~~ndv~~yDl~s~~~~W~~v--~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~ 301 (999)
..+...|+.+|++-. .++.- +.... ....+.+...++.+|++||..
T Consensus 120 TenWNsVvDC~P~VfLiDleFG--C~tah~lpEl~d----G~SFHvslar~D~VYilGGHs 174 (337)
T PF03089_consen 120 TENWNSVVDCPPQVFLIDLEFG--CCTAHTLPELQD----GQSFHVSLARNDCVYILGGHS 174 (337)
T ss_pred hhhcceeccCCCeEEEEecccc--ccccccchhhcC----CeEEEEEEecCceEEEEccEE
Confidence 123457888888765 44332 22222 233444455589999999974
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00022 Score=73.62 Aligned_cols=58 Identities=24% Similarity=0.427 Sum_probs=42.2
Q ss_pred CeEEEecCC-CCHH-----HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCc
Q 001895 699 PIKIFGDLH-GQFG-----DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 699 ~i~vvGDiH-G~~~-----~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (999)
.|.||+|.| |.-. .+.++|+.. ..+ .++.+||+++ .+++.+|..++ ..++.++|||
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~---~~d------~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~ 62 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPG---KIQ------HVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDF 62 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccC---CCC------EEEECCCCCC-----HHHHHHHHhhC----CceEEEECCC
Confidence 378999999 6543 356666541 122 6889999987 78888776652 2589999999
Q ss_pred cc
Q 001895 773 EA 774 (999)
Q Consensus 773 E~ 774 (999)
|.
T Consensus 63 D~ 64 (178)
T cd07394 63 DE 64 (178)
T ss_pred Cc
Confidence 97
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.3e-05 Score=62.98 Aligned_cols=47 Identities=30% Similarity=0.599 Sum_probs=39.8
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCC
Q 001895 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT 185 (999)
Q Consensus 115 ~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~ 185 (999)
+||++||..... .++++++||+.+++|+.++++ |.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~~---------------------~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ---------------------RLKSVEVYDPETNKWTPLPSM---PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc---------------------eeeeEEEECCCCCeEccCCCC---CCccccceEEEeCC
Confidence 489999985422 778999999999999999876 79999999998764
|
|
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0013 Score=70.25 Aligned_cols=148 Identities=18% Similarity=0.214 Sum_probs=93.6
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCc--
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK-- 161 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~-- 161 (999)
...-.|+-|+=+.+..-...+++ ...-++.||.+.++. ..+.+|++...+..
T Consensus 15 dSCYLPPLR~PAv~~~~~~~~~~------~~~YlIHGGrTPNNE--------------------lS~~LY~ls~~s~~cN 68 (337)
T PF03089_consen 15 DSCYLPPLRCPAVCHLSDPSDGE------PEQYLIHGGRTPNNE--------------------LSSSLYILSVDSRGCN 68 (337)
T ss_pred CcccCCCCCCccEeeecCCCCCC------eeeEEecCCcCCCcc--------------------cccceEEEEeecCCCC
Confidence 34456777776666553332221 345667788877654 77788888766432
Q ss_pred ------EEEecCCCCCCCCCcCcEEEEe---CC-EEEEEcccCC--CC-----------CCcCcEEEEecCCCCCceEEE
Q 001895 162 ------WSRITPFGEPPTPRAAHVATAV---GT-MVVIQGGIGP--AG-----------LSAEDLHVLDLTQQRPRWHRV 218 (999)
Q Consensus 162 ------W~~l~~~g~~P~pR~~hsa~~~---g~-~iyv~GG~~~--~~-----------~~~~dv~vyD~~t~t~kW~~v 218 (999)
...-.-.|+.|.+|++|++-++ |. ..++|||..- .+ .....+|++|+.-.-..=..+
T Consensus 69 kK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRTTenWNsVvDC~P~VfLiDleFGC~tah~l 148 (337)
T PF03089_consen 69 KKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRTTENWNSVVDCPPQVFLIDLEFGCCTAHTL 148 (337)
T ss_pred ceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccchhhcceeccCCCeEEEEeccccccccccc
Confidence 3334456889999999999887 33 7899999641 11 123467888876431112223
Q ss_pred eecCCCCCCCcccEEEEECCcEEEEEccCC--CCCCCCeEEEEEC
Q 001895 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDT 261 (999)
Q Consensus 219 ~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~--g~~~~ndv~~yDl 261 (999)
+ .+--+...|.+..-++ .+|++||.. .+..-..++++.+
T Consensus 149 p---El~dG~SFHvslar~D-~VYilGGHsl~sd~Rpp~l~rlkV 189 (337)
T PF03089_consen 149 P---ELQDGQSFHVSLARND-CVYILGGHSLESDSRPPRLYRLKV 189 (337)
T ss_pred h---hhcCCeEEEEEEecCc-eEEEEccEEccCCCCCCcEEEEEE
Confidence 2 5667788888877787 999999974 3334445665543
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.5e-05 Score=62.62 Aligned_cols=47 Identities=32% Similarity=0.471 Sum_probs=39.3
Q ss_pred EEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECC
Q 001895 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGD 416 (999)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~ 416 (999)
+|||+||..... ..+++++||+.+++|..++.+ +.+|+.|+++++++
T Consensus 1 ~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ----RLKSVEVYDPETNKWTPLPSM---------------------PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc----eeeeEEEECCCCCeEccCCCC---------------------CCccccceEEEeCC
Confidence 489999986532 378899999999999998877 67999999988764
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00025 Score=73.30 Aligned_cols=65 Identities=25% Similarity=0.323 Sum_probs=44.4
Q ss_pred eEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-HHHHHHHHHhhhcCCCCEEEecCCccccc
Q 001895 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-LETITLLLALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 700 i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (999)
|.+++||||++..|.+ ........+ -+|+.||++++|... .+.+..|.. .+..++.+.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD------AVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC------EEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 222211222 688999999999763 333333332 2446999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0019 Score=69.49 Aligned_cols=149 Identities=14% Similarity=0.170 Sum_probs=95.2
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCC--CCCceEEEeecCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ--QRPRWHRVVVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t--~t~kW~~v~~~g~~P 225 (999)
...-..||+.+++++.+... .--...+.+.+ ++.+++.||...+ ...+..|++.. .+..|.... ..|-
T Consensus 45 ~a~s~~yD~~tn~~rpl~v~----td~FCSgg~~L~dG~ll~tGG~~~G---~~~ir~~~p~~~~~~~~w~e~~--~~m~ 115 (243)
T PF07250_consen 45 PAHSVEYDPNTNTFRPLTVQ----TDTFCSGGAFLPDGRLLQTGGDNDG---NKAIRIFTPCTSDGTCDWTESP--NDMQ 115 (243)
T ss_pred eEEEEEEecCCCcEEeccCC----CCCcccCcCCCCCCCEEEeCCCCcc---ccceEEEecCCCCCCCCceECc--cccc
Confidence 55667899999999998754 22222233333 5699999998652 24677788765 123588775 2488
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECC---CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA---AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~---s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.+|...+++.+.+++++|+||.... ..+.|... .....|..+......-+.-.+-......+|+|++|+..
T Consensus 116 ~~RWYpT~~~L~DG~vlIvGG~~~~----t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~-- 189 (243)
T PF07250_consen 116 SGRWYPTATTLPDGRVLIVGGSNNP----TYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR-- 189 (243)
T ss_pred CCCccccceECCCCCEEEEeCcCCC----cccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC--
Confidence 9999999999999999999998732 22223321 12224444433222122235556667779999999874
Q ss_pred CCCCcccEEEEecCCC
Q 001895 303 SSVPLASAYGLAKHRD 318 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~ 318 (999)
+.+.||..++
T Consensus 190 ------~s~i~d~~~n 199 (243)
T PF07250_consen 190 ------GSIIYDYKTN 199 (243)
T ss_pred ------CcEEEeCCCC
Confidence 3345666655
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0008 Score=72.37 Aligned_cols=152 Identities=14% Similarity=0.235 Sum_probs=97.7
Q ss_pred EEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC----CCceEEEcccCCCCC
Q 001895 203 LHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA----KPYEWRKLEPEGEGP 278 (999)
Q Consensus 203 v~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s----~~~~W~~v~~~~~~P 278 (999)
-.+||+.+++ ++.+.+ ..--...+.+.+.++.+++.||..+. ...+-.|++.. . .|........
T Consensus 48 s~~yD~~tn~--~rpl~v----~td~FCSgg~~L~dG~ll~tGG~~~G--~~~ir~~~p~~~~~~~--~w~e~~~~m~-- 115 (243)
T PF07250_consen 48 SVEYDPNTNT--FRPLTV----QTDTFCSGGAFLPDGRLLQTGGDNDG--NKAIRIFTPCTSDGTC--DWTESPNDMQ-- 115 (243)
T ss_pred EEEEecCCCc--EEeccC----CCCCcccCcCCCCCCCEEEeCCCCcc--ccceEEEecCCCCCCC--CceECccccc--
Confidence 4578998864 777642 33334444455666689999998542 34566777754 4 7988764322
Q ss_pred CCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC---CCeEEEEECC---CCCCCCcceeEEEEECCEEEEEcCc
Q 001895 279 PPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR---DGRWEWAIAP---GVSPSPRYQHAAVFVNARLHVSGGA 352 (999)
Q Consensus 279 ~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~---~~~W~w~~~~---g~~P~~R~~hsav~~~~~L~V~GG~ 352 (999)
.+|.+.++....+|+++|+||... ..+.|.+.. ...+.|.... ...+...|-+..+.-+|+||+++..
T Consensus 116 ~~RWYpT~~~L~DG~vlIvGG~~~------~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~ 189 (243)
T PF07250_consen 116 SGRWYPTATTLPDGRVLIVGGSNN------PTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR 189 (243)
T ss_pred CCCccccceECCCCCEEEEeCcCC------CcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC
Confidence 348999999999999999999873 334444432 1223332221 1223444555666669999999863
Q ss_pred CCCCCCcccCCeEEEEECCCCeE-EEcccCcC
Q 001895 353 LGGGRMVEDSSSVAVLDTAAGVW-CDTKSVVT 383 (999)
Q Consensus 353 ~~~~~~~~~~~~v~vyD~~t~~W-~~v~~~~~ 383 (999)
+-.+||+.++++ +.++.++.
T Consensus 190 -----------~s~i~d~~~n~v~~~lP~lPg 210 (243)
T PF07250_consen 190 -----------GSIIYDYKTNTVVRTLPDLPG 210 (243)
T ss_pred -----------CcEEEeCCCCeEEeeCCCCCC
Confidence 255799999987 77777743
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=6.9e-06 Score=93.46 Aligned_cols=243 Identities=12% Similarity=0.015 Sum_probs=163.1
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCeeeecC----CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC
Q 001895 670 FLDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ 745 (999)
Q Consensus 670 ~l~~~~i~~l~~~~~~~~~~e~~~l~~~~----~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~ 745 (999)
.|...++..+++.+.+++..+|+...+.+ -.+.++|.||.+.|+.++++.- |.-. .-|++-|++|+++.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~-----K~Y~rrg~a~m~l~ 86 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYI-----KAYVRRGTAVMALG 86 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhh-----heeeeccHHHHhHH
Confidence 56778899999999999999998887743 3788999999999999998764 2111 15999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecC
Q 001895 746 HSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825 (999)
Q Consensus 746 ~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHg 825 (999)
...+.+..|...+...|+...+.|++||+..+-..++|..+....+++. ...++..+...+.. |++..+.+.++=-|
T Consensus 87 ~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~- 163 (476)
T KOG0376|consen 87 EFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH- 163 (476)
T ss_pred HHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-
Confidence 9999999999999999999999999999999999999998887777654 22333333332222 14445544333322
Q ss_pred CccCc--------------c-----cC-HHHh----hhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCcee
Q 001895 826 GIGRS--------------I-----NH-VEQI----ENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVT 881 (999)
Q Consensus 826 Gi~~~--------------~-----~~-~~~i----~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~ 881 (999)
-+... + -+ +++. +.+..++++ .+-.|.+|+++... -..+-...++.+ ..
T Consensus 164 kvt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~----~~~~d~~~sv~gd~--hGqfydl~nif~-l~ 236 (476)
T KOG0376|consen 164 KVTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI----SVPGDVKISVCGDT--HGQFYDLLNIFE-LN 236 (476)
T ss_pred hhhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe----ecCCCceEEecCCc--cccccchhhhHh-hc
Confidence 11000 0 00 0111 111122222 14467788888652 223334455555 34
Q ss_pred eCHHHHHHHHHHcCCcEEEEeccccc-----------c-ceEEec---CCeEEEEecccccCC
Q 001895 882 FGPDRVMEFCNNNDLQLIVRAHECVM-----------D-GFERFA---QGHLITLFSATNYCG 929 (999)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~-----------~-G~~~~~---~~~~iTvFSa~~y~~ 929 (999)
.+++....||.+.++.-+++.|.-+. + +|.... .+.++++|+++.+|-
T Consensus 237 g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 237 GLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 56777888898999998888886542 1 111111 235899999998874
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00039 Score=67.85 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=40.1
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 701 ~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
.||+|.||..+.+.+++... ...+ .++++||+. .+++.++..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~~~d------~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--EGVD------LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhhC--CCCC------EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 38999999988887777652 2222 799999984 35566666552 225899999999
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.012 Score=63.14 Aligned_cols=206 Identities=7% Similarity=0.059 Sum_probs=114.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCc-EEEEe----CC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAH-VATAV----GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~h-sa~~~----g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
..++++||.|++|..++.....+.....+ .+..+ +. +|+.+...... .....+++|++.++ .|..+...
T Consensus 14 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~-~~~~~~~Vys~~~~--~Wr~~~~~-- 88 (230)
T TIGR01640 14 KRLVVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGN-RNQSEHQVYTLGSN--SWRTIECS-- 88 (230)
T ss_pred CcEEEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCC-CCCccEEEEEeCCC--CccccccC--
Confidence 37899999999999997532100001111 11112 12 66666543211 13357889999986 49988622
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.+........+.+++ .||-+.-.........+..||+.+. +|.. ++.... .............+|+|.++.....
T Consensus 89 ~~~~~~~~~~v~~~G-~lyw~~~~~~~~~~~~IvsFDl~~E--~f~~~i~~P~~-~~~~~~~~~L~~~~G~L~~v~~~~~ 164 (230)
T TIGR01640 89 PPHHPLKSRGVCING-VLYYLAYTLKTNPDYFIVSFDVSSE--RFKEFIPLPCG-NSDSVDYLSLINYKGKLAVLKQKKD 164 (230)
T ss_pred CCCccccCCeEEECC-EEEEEEEECCCCCcEEEEEEEcccc--eEeeeeecCcc-ccccccceEEEEECCEEEEEEecCC
Confidence 122112222556777 6887764432222236999999999 8884 433211 1111123345556788888765432
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcc----eeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCC
Q 001895 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY----QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~----~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~ 373 (999)
. ...++|.+......+|+..-.-+..+.+.. ....+..+++|++.... .. ..-+..||+.++
T Consensus 165 ~--~~~~IWvl~d~~~~~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~~-~~------~~~~~~y~~~~~ 230 (230)
T TIGR01640 165 T--NNFDLWVLNDAGKQEWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCED-EN------PFYIFYYNVGEN 230 (230)
T ss_pred C--CcEEEEEECCCCCCceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeCC-CC------ceEEEEEeccCC
Confidence 2 236899997665567765433332222221 12345567888887653 10 123888998874
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00032 Score=76.13 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=46.8
Q ss_pred CCeEEEecCCCCH------HHHHHHHHHhCCCCCCCCccceeEEEeccccCC--C-----CChHHHHHHHHHhhhcCCCC
Q 001895 698 APIKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR--G-----QHSLETITLLLALKVEYPNN 764 (999)
Q Consensus 698 ~~i~vvGDiHG~~------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDR--G-----~~s~evl~ll~~lk~~~P~~ 764 (999)
+++++++|+|... ..|+++|+.... ..+ .++++||++|. | +...+++.+|..|+.. +-.
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~-~~d------~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~ 72 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEAR-QAD------ALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVP 72 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhc-cCC------EEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCe
Confidence 3689999999542 235555543211 112 68889999985 2 3346777777777643 246
Q ss_pred EEEecCCcccc
Q 001895 765 VHLIRGNHEAA 775 (999)
Q Consensus 765 v~llrGNHE~~ 775 (999)
|++++||||..
T Consensus 73 v~~v~GNHD~~ 83 (241)
T PRK05340 73 CYFMHGNRDFL 83 (241)
T ss_pred EEEEeCCCchh
Confidence 99999999973
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0073 Score=64.33 Aligned_cols=69 Identities=16% Similarity=0.244 Sum_probs=39.1
Q ss_pred eCHHHHHHHHHHc-CCcEEEEeccccccceEEe-----cCCeEEEEecccccCC--CCCCe-EEEEEEcCC-ceEEeEEe
Q 001895 882 FGPDRVMEFCNNN-DLQLIVRAHECVMDGFERF-----AQGHLITLFSATNYCG--TANNA-GAILVLGRD-LVVVPKLI 951 (999)
Q Consensus 882 fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~-----~~~~~iTvFSa~~y~~--~~~n~-ga~l~~~~~-~~~~~~~~ 951 (999)
.+.+.+.+.++++ ++++++-||.=. .+.... .++.+..+++ +|.. ..+|. =.++.++.+ .+|..+.+
T Consensus 135 ~~~~~~~~ll~~~~~V~~v~~GH~H~-~~~~~~~~~~~~g~~v~~~~~--~~q~~~~~g~~~~r~~~f~~~~~~i~~~ty 211 (214)
T cd07399 135 DGQQIWDKLVKKNDNVFMVLSGHVHG-AGRTTLVSVGDAGRTVHQMLA--DYQGEPNGGNGFLRLLEFDPDNNKIDVRTY 211 (214)
T ss_pred cHHHHHHHHHhCCCCEEEEEccccCC-CceEEEcccCCCCCEeeEEee--cccCCCCCCcceEEEEEEecCCCEEEEEeC
Confidence 4666788899988 899999999533 233322 1334555543 3421 11221 134555555 46777766
Q ss_pred cc
Q 001895 952 HP 953 (999)
Q Consensus 952 ~~ 953 (999)
.|
T Consensus 212 sp 213 (214)
T cd07399 212 SP 213 (214)
T ss_pred CC
Confidence 55
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00011 Score=74.73 Aligned_cols=67 Identities=27% Similarity=0.236 Sum_probs=45.6
Q ss_pred eEEEecCCCCHHHHHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 700 IKIFGDLHGQFGDLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 700 i~vvGDiHG~~~~L~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
+.+++|||+....+...+.. ......+ -++++||+++++....++. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d------~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDAD------ILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCC------EEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 46899999999877665531 1111122 5888999999987765554 2222 23345799999999985
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.002 Score=63.72 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=28.4
Q ss_pred eEEEeccccCCCCCh-H-HHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 733 DYLFLGDYVDRGQHS-L-ETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s-~-evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.+|++||+++.|... . +...++-.++... ..+++++||||.
T Consensus 38 ~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 38 LVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 688899999998742 1 2334444444322 379999999998
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00037 Score=77.02 Aligned_cols=70 Identities=20% Similarity=0.082 Sum_probs=49.9
Q ss_pred CCeEEEecCCCC----HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCC--CChHHHHHHHHHhhhcCCCCEEEecCC
Q 001895 698 APIKIFGDLHGQ----FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG--QHSLETITLLLALKVEYPNNVHLIRGN 771 (999)
Q Consensus 698 ~~i~vvGDiHG~----~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG--~~s~evl~ll~~lk~~~P~~v~llrGN 771 (999)
.+|.+++|||.. ...+.++++.......+ -++++|||+|++ ...-+++.+|..|+... .+|.+.||
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD------lVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GN 121 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPD------LILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGN 121 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC------EEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCC
Confidence 459999999976 45577777665432222 688899999954 33345667777777654 49999999
Q ss_pred cccc
Q 001895 772 HEAA 775 (999)
Q Consensus 772 HE~~ 775 (999)
||..
T Consensus 122 HD~~ 125 (271)
T PRK11340 122 HDRP 125 (271)
T ss_pred CCcc
Confidence 9973
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00039 Score=74.22 Aligned_cols=70 Identities=30% Similarity=0.311 Sum_probs=49.8
Q ss_pred CCeEEEecCCCCHH----HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH-HHHHHHHHhhhcCCCCEEEecCCc
Q 001895 698 APIKIFGDLHGQFG----DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-ETITLLLALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 698 ~~i~vvGDiHG~~~----~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-evl~ll~~lk~~~P~~v~llrGNH 772 (999)
.++.+++|+|.... .+.++++.+.....+ -+|++||++|.+.... ++..++..++. +..++++.|||
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d------~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNH 73 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPD------LVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNH 73 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCC------EEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCc
Confidence 36899999998743 566776665432222 5888999999988765 55555555533 34699999999
Q ss_pred ccc
Q 001895 773 EAA 775 (999)
Q Consensus 773 E~~ 775 (999)
|..
T Consensus 74 D~~ 76 (223)
T cd07385 74 DYY 76 (223)
T ss_pred ccc
Confidence 984
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0015 Score=70.49 Aligned_cols=68 Identities=15% Similarity=0.221 Sum_probs=43.4
Q ss_pred eEEEecCCCCH------HHHHHHHHHhCCCCCCCCccceeEEEeccccCC--CC---C--hHHHHHHHHHhhhcCCCCEE
Q 001895 700 IKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR--GQ---H--SLETITLLLALKVEYPNNVH 766 (999)
Q Consensus 700 i~vvGDiHG~~------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDR--G~---~--s~evl~ll~~lk~~~P~~v~ 766 (999)
+++++|+|... ..|++.|..... ..+ .++++||++|. |. . ..+++.+|..|+.. +..|+
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d------~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KAD------ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCC------EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEE
Confidence 36899999543 234555544321 122 68889999995 21 1 23556666666543 35799
Q ss_pred EecCCcccc
Q 001895 767 LIRGNHEAA 775 (999)
Q Consensus 767 llrGNHE~~ 775 (999)
++.||||..
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999973
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.31 Score=56.94 Aligned_cols=187 Identities=16% Similarity=0.177 Sum_probs=102.4
Q ss_pred eEEEEECCCCc--EEEecCCCCC-----CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEP-----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~-----P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.+++||..+++ |+.-...... ..++..-+.++.++++|+.+. ...++.||..+....|+.-.
T Consensus 80 ~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~---- 148 (394)
T PRK11138 80 LVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSE-------KGQVYALNAEDGEVAWQTKV---- 148 (394)
T ss_pred eEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcC-------CCEEEEEECCCCCCcccccC----
Confidence 68889988764 8754322100 012333345666888887543 24799999988777897643
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~ 303 (999)
+.. ...+-++.++ .+|+..+ + ..++.||..+....|+.-...+. ...+...+-++.++.+|+..+ +
T Consensus 149 -~~~-~~ssP~v~~~-~v~v~~~-~-----g~l~ald~~tG~~~W~~~~~~~~--~~~~~~~sP~v~~~~v~~~~~-~-- 214 (394)
T PRK11138 149 -AGE-ALSRPVVSDG-LVLVHTS-N-----GMLQALNESDGAVKWTVNLDVPS--LTLRGESAPATAFGGAIVGGD-N-- 214 (394)
T ss_pred -CCc-eecCCEEECC-EEEEECC-C-----CEEEEEEccCCCEeeeecCCCCc--ccccCCCCCEEECCEEEEEcC-C--
Confidence 111 1122234454 6776433 2 36999999998888987543211 000111222344666666432 2
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCC----c---ceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSP----R---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV-- 374 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~----R---~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~-- 374 (999)
..++.++.. +|+..|......+... | ...+-++.++.+|+.+. ...++++|+.+++
T Consensus 215 ----g~v~a~d~~-~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~----------~g~l~ald~~tG~~~ 279 (394)
T PRK11138 215 ----GRVSAVLME-QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAY----------NGNLVALDLRSGQIV 279 (394)
T ss_pred ----CEEEEEEcc-CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEc----------CCeEEEEECCCCCEE
Confidence 234455543 4554555332211100 1 12344567889988653 2358999999874
Q ss_pred EEE
Q 001895 375 WCD 377 (999)
Q Consensus 375 W~~ 377 (999)
|+.
T Consensus 280 W~~ 282 (394)
T PRK11138 280 WKR 282 (394)
T ss_pred Eee
Confidence 764
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0018 Score=66.49 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=27.0
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 733 DYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+|++||++|..... .+...+-+.......-.+++++||||..
T Consensus 44 ~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 44 RLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred EEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 799999999865432 2222221111223345799999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.026 Score=57.73 Aligned_cols=65 Identities=17% Similarity=0.252 Sum_probs=44.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (999)
..|.|++|.||...+..+.++.......+ -+|.+||++...... +|......+++.+|||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d------~vih~GD~~~~~~~~--------~l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVD------AVIHAGDSTSPFTLD--------ALEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCC------EEEECCCcCCccchH--------HhhcccccceEEEEccCCCcc
Confidence 46899999999997655555554433333 578899999865431 111112368999999999843
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0016 Score=70.54 Aligned_cols=68 Identities=26% Similarity=0.215 Sum_probs=46.4
Q ss_pred CeEEEecCCCCH-----H-HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCc
Q 001895 699 PIKIFGDLHGQF-----G-DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 699 ~i~vvGDiHG~~-----~-~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (999)
+|.+++|+|..+ . .|.++++.+.-...+ -+|+.||++++.....+++..|..+ .+..|+++.|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d------~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKID------HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCC------EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCC
Confidence 478999999763 1 245555555322222 6889999999876666666555543 334699999999
Q ss_pred ccc
Q 001895 773 EAA 775 (999)
Q Consensus 773 E~~ 775 (999)
|..
T Consensus 72 D~~ 74 (239)
T TIGR03729 72 DML 74 (239)
T ss_pred CCC
Confidence 974
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0029 Score=64.71 Aligned_cols=40 Identities=35% Similarity=0.535 Sum_probs=29.9
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|++||++++|..... +.+|.++ +..+++++||||....
T Consensus 45 ~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 45 TVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred EEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 79999999999987644 4444443 3469999999997543
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.054 Score=59.46 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEE-EEEEcCC
Q 001895 884 PDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGA-ILVLGRD 943 (999)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga-~l~~~~~ 943 (999)
...+.+.|++.++++++-||.=......+ +|--.-+-.++.++...++.|. ++.++++
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 253 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTED 253 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCC
Confidence 35677788999999999999877655432 3321122233333333333443 5556544
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.88 Score=48.47 Aligned_cols=181 Identities=19% Similarity=0.216 Sum_probs=104.9
Q ss_pred CeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEE-EeecCCCCC
Q 001895 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR-VVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~-v~~~g~~P~ 226 (999)
..+++||..+++ |+.-... +.....+..++.+|+..+. +.++.+|..+....|+. .......+
T Consensus 46 ~~l~~~d~~tG~~~W~~~~~~------~~~~~~~~~~~~v~v~~~~-------~~l~~~d~~tG~~~W~~~~~~~~~~~- 111 (238)
T PF13360_consen 46 GNLYALDAKTGKVLWRFDLPG------PISGAPVVDGGRVYVGTSD-------GSLYALDAKTGKVLWSIYLTSSPPAG- 111 (238)
T ss_dssp SEEEEEETTTSEEEEEEECSS------CGGSGEEEETTEEEEEETT-------SEEEEEETTTSCEEEEEEE-SSCTCS-
T ss_pred CEEEEEECCCCCEEEEeeccc------cccceeeecccccccccce-------eeeEecccCCcceeeeeccccccccc-
Confidence 389999998875 7766422 2222257778888887632 37999998887778994 43211111
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCC----ccceEEEEEeCCEEEEEeccCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP----CMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~----r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.+......+.++ .+|+... -..++.+|+.+....|+.....+....+ .......++.++.+|+..+...
T Consensus 112 ~~~~~~~~~~~~-~~~~~~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ 184 (238)
T PF13360_consen 112 VRSSSSPAVDGD-RLYVGTS------SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGR 184 (238)
T ss_dssp TB--SEEEEETT-EEEEEET------CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSS
T ss_pred cccccCceEecC-EEEEEec------cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCe
Confidence 233444444555 5666543 3479999999887789885533221000 0112334455678888765431
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
+..+ ...+++-.|...... ........++.||+.. . ...++++|++|++
T Consensus 185 -------~~~~-d~~tg~~~w~~~~~~-----~~~~~~~~~~~l~~~~-~---------~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 185 -------VVAV-DLATGEKLWSKPISG-----IYSLPSVDGGTLYVTS-S---------DGRLYALDLKTGK 233 (238)
T ss_dssp -------EEEE-ETTTTEEEEEECSS------ECECEECCCTEEEEEE-T---------TTEEEEEETTTTE
T ss_pred -------EEEE-ECCCCCEEEEecCCC-----ccCCceeeCCEEEEEe-C---------CCEEEEEECCCCC
Confidence 5666 444556456333111 1122455577888875 2 3569999999985
|
... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.49 Score=55.21 Aligned_cols=181 Identities=17% Similarity=0.211 Sum_probs=103.0
Q ss_pred cCeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec--CCC
Q 001895 149 TADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPG 224 (999)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~--g~~ 224 (999)
.+.++.||+.+++ |+.-.... ....+...+-++.++.+|+..+. ..++.+|..+....|+.-... +..
T Consensus 169 ~g~l~ald~~tG~~~W~~~~~~~-~~~~~~~~sP~v~~~~v~~~~~~-------g~v~a~d~~~G~~~W~~~~~~~~~~~ 240 (394)
T PRK11138 169 NGMLQALNESDGAVKWTVNLDVP-SLTLRGESAPATAFGGAIVGGDN-------GRVSAVLMEQGQLIWQQRISQPTGAT 240 (394)
T ss_pred CCEEEEEEccCCCEeeeecCCCC-cccccCCCCCEEECCEEEEEcCC-------CEEEEEEccCChhhheeccccCCCcc
Confidence 3468999998876 88753310 01112223344556676664432 468889998876679753211 000
Q ss_pred CCCC---cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001895 225 PGPR---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (999)
Q Consensus 225 P~~R---~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~ 301 (999)
...| ...+-++.++ .+|+.+. + ..++++|+.+....|+.-.. .. ...++.++++|+...
T Consensus 241 ~~~~~~~~~~sP~v~~~-~vy~~~~-~-----g~l~ald~~tG~~~W~~~~~--~~-------~~~~~~~~~vy~~~~-- 302 (394)
T PRK11138 241 EIDRLVDVDTTPVVVGG-VVYALAY-N-----GNLVALDLRSGQIVWKREYG--SV-------NDFAVDGGRIYLVDQ-- 302 (394)
T ss_pred chhcccccCCCcEEECC-EEEEEEc-C-----CeEEEEECCCCCEEEeecCC--Cc-------cCcEEECCEEEEEcC--
Confidence 0001 1123345555 7887553 2 36899999988778986321 10 123456889998742
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 302 ~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
...++.++.. +++-.|.... ...+...+.++.+++||+... ...++++|..+++
T Consensus 303 -----~g~l~ald~~-tG~~~W~~~~---~~~~~~~sp~v~~g~l~v~~~----------~G~l~~ld~~tG~ 356 (394)
T PRK11138 303 -----NDRVYALDTR-GGVELWSQSD---LLHRLLTAPVLYNGYLVVGDS----------EGYLHWINREDGR 356 (394)
T ss_pred -----CCeEEEEECC-CCcEEEcccc---cCCCcccCCEEECCEEEEEeC----------CCEEEEEECCCCC
Confidence 2346777764 4454554322 112333445667899987532 2358899998885
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0033 Score=69.31 Aligned_cols=73 Identities=23% Similarity=0.350 Sum_probs=47.4
Q ss_pred CeEEEecCC-CC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-hHHHHHHHHHhhhcCCCC
Q 001895 699 PIKIFGDLH-GQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-SLETITLLLALKVEYPNN 764 (999)
Q Consensus 699 ~i~vvGDiH-G~------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s~evl~ll~~lk~~~P~~ 764 (999)
++.+++|+| +. ...|.++++.+.....+ -+|++||+++.|.. +.+-+..++++-...+-.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d------~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p 75 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLD------FVVQLGDIIDGDNARAEEALDAVLAILDRLKGP 75 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCC------EEEECCCeecCCCchHHHHHHHHHHHHHhcCCC
Confidence 478999999 22 45666777666432222 58889999998873 233343333333333346
Q ss_pred EEEecCCccccch
Q 001895 765 VHLIRGNHEAADI 777 (999)
Q Consensus 765 v~llrGNHE~~~~ 777 (999)
++++.||||....
T Consensus 76 ~~~v~GNHD~~~~ 88 (267)
T cd07396 76 VHHVLGNHDLYNP 88 (267)
T ss_pred EEEecCccccccc
Confidence 9999999998644
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0026 Score=67.67 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=46.0
Q ss_pred CeEEEecCC-CCH--------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcC--
Q 001895 699 PIKIFGDLH-GQF--------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY-- 761 (999)
Q Consensus 699 ~i~vvGDiH-G~~--------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~-- 761 (999)
+|+.++|+| |.. ..|.++++.+.....+ .+|+.||++|....+.+.+..+..+..++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVD------FVLIAGDLFDSNNPSPEALELLIEALRRLKE 74 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCC------EEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 478999999 422 2355555554332222 58899999998876555443333332222
Q ss_pred -CCCEEEecCCccccch
Q 001895 762 -PNNVHLIRGNHEAADI 777 (999)
Q Consensus 762 -P~~v~llrGNHE~~~~ 777 (999)
.-.++++.||||....
T Consensus 75 ~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 75 AGIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCCEEEecCCCCCccc
Confidence 3469999999998654
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0033 Score=68.91 Aligned_cols=70 Identities=20% Similarity=0.328 Sum_probs=44.5
Q ss_pred eEEEecCCCCHHHHHHHHHHhCC---CCCCCCccceeEEEeccccCCCC-ChHHHHH------HHHHh------hhcCCC
Q 001895 700 IKIFGDLHGQFGDLMRLFDEYGS---PSTAGDIAYIDYLFLGDYVDRGQ-HSLETIT------LLLAL------KVEYPN 763 (999)
Q Consensus 700 i~vvGDiHG~~~~L~~il~~~g~---~~~~~~~~~~~~vfLGDyVDRG~-~s~evl~------ll~~l------k~~~P~ 763 (999)
|+|+||+||+++.+.+.++.... ...+ -+|++||+-..+. ..++.+. -+..+ ..+.|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D------~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVD------LLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPI 74 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCc------EEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCe
Confidence 68999999999998775554321 1222 5888999975443 3343331 11111 333566
Q ss_pred CEEEecCCcccc
Q 001895 764 NVHLIRGNHEAA 775 (999)
Q Consensus 764 ~v~llrGNHE~~ 775 (999)
-+++|-||||..
T Consensus 75 ~t~fi~GNHE~~ 86 (262)
T cd00844 75 LTIFIGGNHEAS 86 (262)
T ss_pred eEEEECCCCCCH
Confidence 689999999974
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0066 Score=72.88 Aligned_cols=78 Identities=19% Similarity=0.254 Sum_probs=44.1
Q ss_pred CCeEEEecCC-CCH----HHHHHHHHHh-CCCCCCC--CccceeEEEeccccCC-CCCh---------------HHHHHH
Q 001895 698 APIKIFGDLH-GQF----GDLMRLFDEY-GSPSTAG--DIAYIDYLFLGDYVDR-GQHS---------------LETITL 753 (999)
Q Consensus 698 ~~i~vvGDiH-G~~----~~L~~il~~~-g~~~~~~--~~~~~~~vfLGDyVDR-G~~s---------------~evl~l 753 (999)
..+++++||| |.- ..+.++++.+ |...... ...-..+|++||+||. |.+. -++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 5689999999 653 2234444433 2221100 0001178999999994 3221 134455
Q ss_pred HHHhhhcCCCCEEEecCCccccch
Q 001895 754 LLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 754 l~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
|..|... -.|++++||||....
T Consensus 324 L~~L~~~--i~V~~ipGNHD~~~~ 345 (504)
T PRK04036 324 LKQIPED--IKIIISPGNHDAVRQ 345 (504)
T ss_pred HHhhhcC--CeEEEecCCCcchhh
Confidence 5555322 369999999997543
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.47 E-value=2.5 Score=48.86 Aligned_cols=180 Identities=19% Similarity=0.210 Sum_probs=96.8
Q ss_pred eEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+++||..+++ |+.-... +..-+.++.++.+|+.+. ...++.||..+....|+.-. +..
T Consensus 76 ~v~a~d~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~-----~~~- 136 (377)
T TIGR03300 76 TVVALDAETGKRLWRVDLDE------RLSGGVGADGGLVFVGTE-------KGEVIALDAEDGKELWRAKL-----SSE- 136 (377)
T ss_pred eEEEEEccCCcEeeeecCCC------CcccceEEcCCEEEEEcC-------CCEEEEEECCCCcEeeeecc-----Cce-
Confidence 68999988765 8754322 122233445667776543 24799999987666787643 111
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
...+.++.++ .+|+..+ + ..++.||+.+....|+.-..... .........++.++.+| +|..+ .
T Consensus 137 ~~~~p~v~~~-~v~v~~~-~-----g~l~a~d~~tG~~~W~~~~~~~~--~~~~~~~sp~~~~~~v~-~~~~~------g 200 (377)
T TIGR03300 137 VLSPPLVANG-LVVVRTN-D-----GRLTALDAATGERLWTYSRVTPA--LTLRGSASPVIADGGVL-VGFAG------G 200 (377)
T ss_pred eecCCEEECC-EEEEECC-C-----CeEEEEEcCCCceeeEEccCCCc--eeecCCCCCEEECCEEE-EECCC------C
Confidence 1122334454 6776432 2 35899999888778986433211 00011122234456554 44322 2
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCC-----c---ceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--EEE
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSP-----R---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~-----R---~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--W~~ 377 (999)
.++.++.. +|+-.|...... |.. | ...+.++.++.+|+... ...+++||+++++ |..
T Consensus 201 ~v~ald~~-tG~~~W~~~~~~-~~g~~~~~~~~~~~~~p~~~~~~vy~~~~----------~g~l~a~d~~tG~~~W~~ 267 (377)
T TIGR03300 201 KLVALDLQ-TGQPLWEQRVAL-PKGRTELERLVDVDGDPVVDGGQVYAVSY----------QGRVAALDLRSGRVLWKR 267 (377)
T ss_pred EEEEEEcc-CCCEeeeecccc-CCCCCchhhhhccCCccEEECCEEEEEEc----------CCEEEEEECCCCcEEEee
Confidence 35566653 444455433211 111 1 12334556788888642 2458999998774 654
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.45 E-value=1.6 Score=46.42 Aligned_cols=182 Identities=20% Similarity=0.284 Sum_probs=105.0
Q ss_pred eEEEEECCCCc--EEEecCCCCCCCCCcCcE--EEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHV--ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hs--a~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.++|+.+++ |+.-.. .+..+.. .+..++.+|+..+ ...+++||..+....|+.-. +
T Consensus 4 ~l~~~d~~tG~~~W~~~~~-----~~~~~~~~~~~~~~~~v~~~~~-------~~~l~~~d~~tG~~~W~~~~-----~- 65 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLG-----PGIGGPVATAVPDGGRVYVASG-------DGNLYALDAKTGKVLWRFDL-----P- 65 (238)
T ss_dssp EEEEEETTTTEEEEEEECS-----SSCSSEEETEEEETTEEEEEET-------TSEEEEEETTTSEEEEEEEC-----S-
T ss_pred EEEEEECCCCCEEEEEECC-----CCCCCccceEEEeCCEEEEEcC-------CCEEEEEECCCCCEEEEeec-----c-
Confidence 67888987765 877321 1122222 3346788888843 26899999988766788764 2
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~ 305 (999)
.+......+.++ .+|+..+. +.+++||..+....|+. ...... ..........+.++.+|+...
T Consensus 66 ~~~~~~~~~~~~-~v~v~~~~------~~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 130 (238)
T PF13360_consen 66 GPISGAPVVDGG-RVYVGTSD------GSLYALDAKTGKVLWSIYLTSSPP--AGVRSSSSPAVDGDRLYVGTS------ 130 (238)
T ss_dssp SCGGSGEEEETT-EEEEEETT------SEEEEEETTTSCEEEEEEE-SSCT--CSTB--SEEEEETTEEEEEET------
T ss_pred ccccceeeeccc-ccccccce------eeeEecccCCcceeeeeccccccc--cccccccCceEecCEEEEEec------
Confidence 222222455565 78776521 27999999998889994 443221 112333344444777777643
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCC-------cceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--EE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSP-------RYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WC 376 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~-------R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--W~ 376 (999)
...++.++.. +|.-.|.......+.. ......++.++.+|+..+.. .+..+|.++++ |.
T Consensus 131 -~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g----------~~~~~d~~tg~~~w~ 198 (238)
T PF13360_consen 131 -SGKLVALDPK-TGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG----------RVVAVDLATGEKLWS 198 (238)
T ss_dssp -CSEEEEEETT-TTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS----------SEEEEETTTTEEEEE
T ss_pred -cCcEEEEecC-CCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC----------eEEEEECCCCCEEEE
Confidence 2346667654 4455666544332211 11234444568888876531 25566999997 74
Q ss_pred E
Q 001895 377 D 377 (999)
Q Consensus 377 ~ 377 (999)
.
T Consensus 199 ~ 199 (238)
T PF13360_consen 199 K 199 (238)
T ss_dssp E
T ss_pred e
Confidence 3
|
... |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0057 Score=69.90 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=45.2
Q ss_pred CCeEEEecCC-C-----------CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCC-CChHHHHHHHHH----hhhc
Q 001895 698 APIKIFGDLH-G-----------QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG-QHSLETITLLLA----LKVE 760 (999)
Q Consensus 698 ~~i~vvGDiH-G-----------~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~----lk~~ 760 (999)
.+++.++|+| | +...|.++++.+.-...+ -+|+.||++|+. +.+.+++.++.. +...
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD------~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~ 74 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGIT------TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKE 74 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCC------EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3688999999 4 223445555544322222 688899999985 455555444433 2122
Q ss_pred CCCCEEEecCCcccc
Q 001895 761 YPNNVHLIRGNHEAA 775 (999)
Q Consensus 761 ~P~~v~llrGNHE~~ 775 (999)
.+-.|++|.||||..
T Consensus 75 ~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 75 AGITLHVLVGNHDMY 89 (340)
T ss_pred CCCeEEEEccCCCcc
Confidence 345799999999984
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0065 Score=64.49 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=20.7
Q ss_pred eCHHHHHHHHHHcCCcEEEEeccccc
Q 001895 882 FGPDRVMEFCNNNDLQLIVRAHECVM 907 (999)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (999)
.....+.+.++..+.+.+|-||.=..
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~ 201 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRP 201 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 34566777888999999999997554
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0099 Score=64.15 Aligned_cols=69 Identities=26% Similarity=0.328 Sum_probs=43.9
Q ss_pred CeEEEecCCCC------------HHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCC
Q 001895 699 PIKIFGDLHGQ------------FGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764 (999)
Q Consensus 699 ~i~vvGDiHG~------------~~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~ 764 (999)
++.+++|||=. ...|.++++.+... ..+ -+|++||+++.|.. +....+.++..+..-.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d------~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPD------LVLVTGDLTDDGSP--ESYERLRELLAALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCC------EEEECccCCCCCCH--HHHHHHHHHHhhcCCC
Confidence 47899999944 34567777765432 222 58899999998753 2222222222222456
Q ss_pred EEEecCCcccc
Q 001895 765 VHLIRGNHEAA 775 (999)
Q Consensus 765 v~llrGNHE~~ 775 (999)
++.++||||..
T Consensus 73 ~~~v~GNHD~~ 83 (240)
T cd07402 73 VYLLPGNHDDR 83 (240)
T ss_pred EEEeCCCCCCH
Confidence 99999999974
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.096 Score=57.98 Aligned_cols=73 Identities=27% Similarity=0.335 Sum_probs=49.8
Q ss_pred CeEEEecCCCC------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHh--hhcCCCCEEEecC
Q 001895 699 PIKIFGDLHGQ------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL--KVEYPNNVHLIRG 770 (999)
Q Consensus 699 ~i~vvGDiHG~------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~l--k~~~P~~v~llrG 770 (999)
.|..|+|+|-- ...+..+++.+.....+ -+|+.||+.++|. .+-+..+..+ +...+..+++++|
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D------~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpG 73 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPD------LLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPG 73 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCC------EEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCC
Confidence 57889999977 34556666776643333 6899999999963 2222222222 2366778999999
Q ss_pred Cccccchhh
Q 001895 771 NHEAADINA 779 (999)
Q Consensus 771 NHE~~~~~~ 779 (999)
|||.+..+.
T Consensus 74 NHD~~~~~~ 82 (301)
T COG1409 74 NHDARVVNG 82 (301)
T ss_pred CCcCCchHH
Confidence 999976654
|
|
| >KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.00047 Score=76.43 Aligned_cols=208 Identities=9% Similarity=-0.119 Sum_probs=138.2
Q ss_pred eeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccc
Q 001895 732 IDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLP 811 (999)
Q Consensus 732 ~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP 811 (999)
...|+|+++++++.+.++.+-+.+..++.|-.+-..++++|+. .++++.++.-.-.......+|+..++.+..++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCccce
Confidence 3789999999999999999999999999988889999999943 45566666555555556778899999999999
Q ss_pred eeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC--CCCCccCCCCCCceeeCHH--HH
Q 001895 812 LAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS--VEGLRPNARGPGLVTFGPD--RV 887 (999)
Q Consensus 812 laa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~--~~~~~~n~rg~~~~~fg~~--~~ 887 (999)
+..+.. +++|.||++.|...+...+.++.-...-+.. ...+. |-++.+.+. ..-|. .++.. ..||-| ..
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~--gn~kg-~f~llD~~~~~k~tw~--~~~~~-p~~gyDfwyq 196 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAE--GNAKG-GFLLLDSDFNEKGTWE--KPGHS-PLFGYDFWYQ 196 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccc--cCCcC-CeEEecCccceecccc--cCCCc-cccccceeec
Confidence 997766 9999999999987766655533211111111 01111 333322110 11121 11211 222222 23
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCC--ceEEeEEecc
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRD--LVVVPKLIHP 953 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~--~~~~~~~~~~ 953 (999)
-.++.....+.+.+.|...-.++..+.++ ++.|+..-|.-...|.+..+-++.+ +.++.+.+|-
T Consensus 197 pr~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~ 262 (476)
T KOG0918|consen 197 PRHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHN 262 (476)
T ss_pred cccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeeccC
Confidence 34566667777888887654444556666 8889999998888899999988875 2334444443
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.01 Score=64.88 Aligned_cols=71 Identities=25% Similarity=0.302 Sum_probs=45.8
Q ss_pred CeEEEecCC-CC-----------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHH----HHHHHhhhcCC
Q 001895 699 PIKIFGDLH-GQ-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI----TLLLALKVEYP 762 (999)
Q Consensus 699 ~i~vvGDiH-G~-----------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl----~ll~~lk~~~P 762 (999)
+++.++|+| |. +..|.++++.+.-...+ .+|+.||++|+..-+.+.. .+|..|+...|
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D------~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~ 75 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQID------ALLVAGDVFDTANPPAEAQELFNAFFRNLSDANP 75 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 588999999 32 23344455443222222 6889999999987665443 34445544433
Q ss_pred CCEEEecCCcccc
Q 001895 763 NNVHLIRGNHEAA 775 (999)
Q Consensus 763 ~~v~llrGNHE~~ 775 (999)
-.|+++.||||..
T Consensus 76 i~v~~i~GNHD~~ 88 (253)
T TIGR00619 76 IPIVVISGNHDSA 88 (253)
T ss_pred ceEEEEccCCCCh
Confidence 5799999999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.028 Score=62.69 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEE
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLI 919 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~i 919 (999)
....+.+.|+++++++++-||.-..+.+....+++++
T Consensus 181 ~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~ 217 (294)
T cd00839 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV 217 (294)
T ss_pred HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec
Confidence 3456778899999999999997654444334455543
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.008 Score=60.72 Aligned_cols=44 Identities=23% Similarity=0.307 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCCh--H---HHHHHHHHhhhcC-CCCEEEecCCccccc
Q 001895 733 DYLFLGDYVDRGQHS--L---ETITLLLALKVEY-PNNVHLIRGNHEAAD 776 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s--~---evl~ll~~lk~~~-P~~v~llrGNHE~~~ 776 (999)
.+||+||++|.+... . +.+..+.++.... ...++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 689999999987642 1 2222233322222 246999999999843
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.016 Score=62.22 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=41.4
Q ss_pred CCeEEEecCC-CCHHH----------------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh---HHHHHHHHHh
Q 001895 698 APIKIFGDLH-GQFGD----------------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS---LETITLLLAL 757 (999)
Q Consensus 698 ~~i~vvGDiH-G~~~~----------------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s---~evl~ll~~l 757 (999)
..+.||.|+| |--.. |.++.+.......+ .+|++||+.+..... -++..+|..+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d------~vIi~GDl~h~~~~~~~~~~~~~~l~~~ 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIE------ALIINGDLKHEFKKGLEWRFIREFIEVT 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCC------EEEEcCccccccCChHHHHHHHHHHHhc
Confidence 5689999999 53222 22233322222222 799999999765543 2223333332
Q ss_pred hhcCCCCEEEecCCccccc
Q 001895 758 KVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 758 k~~~P~~v~llrGNHE~~~ 776 (999)
...+++++||||...
T Consensus 89 ----~~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 89 ----FRDLILIRGNHDALI 103 (225)
T ss_pred ----CCcEEEECCCCCCcc
Confidence 247999999999743
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.017 Score=63.92 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=45.6
Q ss_pred CCeEEEecCC-C-----------CHHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 001895 698 APIKIFGDLH-G-----------QFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (999)
Q Consensus 698 ~~i~vvGDiH-G-----------~~~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~ 763 (999)
.+++.|+|+| . ....|.++++.+... ..+ -+|+.||++|.|. .+-+..+++.-.+.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D------~vvitGDl~~~~~--~~~~~~~~~~l~~l~~ 86 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFD------LIVATGDLAQDHS--SEAYQHFAEGIAPLRK 86 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCC------EEEECCCCCCCCC--HHHHHHHHHHHhhcCC
Confidence 3588999999 1 145677777765321 112 5888999999874 3333333333333455
Q ss_pred CEEEecCCcccc
Q 001895 764 NVHLIRGNHEAA 775 (999)
Q Consensus 764 ~v~llrGNHE~~ 775 (999)
.++++.||||..
T Consensus 87 Pv~~v~GNHD~~ 98 (275)
T PRK11148 87 PCVWLPGNHDFQ 98 (275)
T ss_pred cEEEeCCCCCCh
Confidence 799999999973
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=95.98 E-value=1.5 Score=50.61 Aligned_cols=185 Identities=18% Similarity=0.252 Sum_probs=101.9
Q ss_pred ccCeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
....++.||..+++ |+.-... ....+.++.++.+|+..+ ...++.+|..+....|+.-... +..
T Consensus 113 ~~g~l~ald~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~~-~~~ 178 (377)
T TIGR03300 113 EKGEVIALDAEDGKELWRAKLSS------EVLSPPLVANGLVVVRTN-------DGRLTALDAATGERLWTYSRVT-PAL 178 (377)
T ss_pred CCCEEEEEECCCCcEeeeeccCc------eeecCCEEECCEEEEECC-------CCeEEEEEcCCCceeeEEccCC-Cce
Confidence 34578999998764 8754321 112233445677777543 2469999998866678865311 100
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCC--CCCcc--ceEEEEEeCCEEEEEeccC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG--PPPCM--YATASARSDGLLLLCGGRD 301 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~--P~~r~--~~~a~~~~~~~LyvfGG~~ 301 (999)
..+...+.++.++ .+| +|..++ .++.+|+.+....|+.-...+.. ...+. ......+.++.+|+... +
T Consensus 179 ~~~~~~sp~~~~~-~v~-~~~~~g-----~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~-~ 250 (377)
T TIGR03300 179 TLRGSASPVIADG-GVL-VGFAGG-----KLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY-Q 250 (377)
T ss_pred eecCCCCCEEECC-EEE-EECCCC-----EEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc-C
Confidence 1122233445554 444 444333 68999998887789753221110 00000 11223445778777542 1
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCC--eEEE
Q 001895 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCD 377 (999)
Q Consensus 302 ~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~--~W~~ 377 (999)
..++.++.. +++-.|....+. ..+.++.++++|+... ...++++|..++ .|..
T Consensus 251 ------g~l~a~d~~-tG~~~W~~~~~~------~~~p~~~~~~vyv~~~----------~G~l~~~d~~tG~~~W~~ 305 (377)
T TIGR03300 251 ------GRVAALDLR-SGRVLWKRDASS------YQGPAVDDNRLYVTDA----------DGVVVALDRRSGSELWKN 305 (377)
T ss_pred ------CEEEEEECC-CCcEEEeeccCC------ccCceEeCCEEEEECC----------CCeEEEEECCCCcEEEcc
Confidence 246677664 445556543211 1234566889998742 245999999877 4764
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.014 Score=68.31 Aligned_cols=71 Identities=23% Similarity=0.371 Sum_probs=43.6
Q ss_pred CeEEEecCC-CC-H------HH----HHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHH----HHHHHhhhcCC
Q 001895 699 PIKIFGDLH-GQ-F------GD----LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI----TLLLALKVEYP 762 (999)
Q Consensus 699 ~i~vvGDiH-G~-~------~~----L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl----~ll~~lk~~~P 762 (999)
+++.++|+| |. + .+ |.++++.+.-...+ -+|+.||++|++..+.+.. .++..|+.. .
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D------~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~ 74 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVD------AIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-G 74 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCC------EEEECCccccCCCCcHHHHHHHHHHHHHHHhc-C
Confidence 588999999 42 1 11 23333333222222 6889999999986654433 334445432 3
Q ss_pred CCEEEecCCccccc
Q 001895 763 NNVHLIRGNHEAAD 776 (999)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (999)
-.|+++.||||...
T Consensus 75 ~~v~~I~GNHD~~~ 88 (407)
T PRK10966 75 CQLVVLAGNHDSVA 88 (407)
T ss_pred CcEEEEcCCCCChh
Confidence 46999999999753
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.024 Score=61.66 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=39.0
Q ss_pred EEEecCC--CCH---HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC-----C-------h----HHHHHHHHHhhh
Q 001895 701 KIFGDLH--GQF---GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ-----H-------S----LETITLLLALKV 759 (999)
Q Consensus 701 ~vvGDiH--G~~---~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~-----~-------s----~evl~ll~~lk~ 759 (999)
++|+|+| +.. ..+..+++.+...... ......+|++||++|+.. . . .++..+|-+|..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~-~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDS-ASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCccc-ccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc
Confidence 6899999 432 2223444433211110 000117889999999731 0 1 123334444432
Q ss_pred cCCCCEEEecCCccccc
Q 001895 760 EYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 760 ~~P~~v~llrGNHE~~~ 776 (999)
.-.|+++.||||...
T Consensus 81 --~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 --HIKIIIIPGNHDAVR 95 (243)
T ss_pred --CCeEEEeCCCCCccc
Confidence 246999999999853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.025 Score=59.45 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=30.0
Q ss_pred eEEEeccccCCCCC---hHHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 733 DYLFLGDYVDRGQH---SLETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 733 ~~vfLGDyVDRG~~---s~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
.+|++||+++.+.. +.+.+..++.......-.++++.||||
T Consensus 44 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 44 LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 68999999997765 355665555544433456899999999
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.028 Score=60.64 Aligned_cols=40 Identities=25% Similarity=0.216 Sum_probs=26.2
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
-+|+.||+++++... +....+..|+.. |..++++.||||.
T Consensus 44 ~viiaGDl~~~~~~~-~~~~~l~~l~~l-~~~v~~V~GNHD~ 83 (232)
T cd07393 44 IVLIPGDISWAMKLE-EAKLDLAWIDAL-PGTKVLLKGNHDY 83 (232)
T ss_pred EEEEcCCCccCCChH-HHHHHHHHHHhC-CCCeEEEeCCccc
Confidence 577899999987643 333333333322 3358999999997
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.37 Score=52.84 Aligned_cols=23 Identities=4% Similarity=0.040 Sum_probs=20.9
Q ss_pred eCHHHHHHHHHHcCCcEEEEecc
Q 001895 882 FGPDRVMEFCNNNDLQLIVRAHE 904 (999)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~ 904 (999)
-.++..++.|+..+-.+|.-||+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCC
Confidence 47899999999999999999996
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.93 Score=48.60 Aligned_cols=164 Identities=12% Similarity=0.125 Sum_probs=91.9
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCC---Ccc--cEEEEE---CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGP---RYG--HVMALV---GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~---R~~--h~~~v~---~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
..++++|+.|. +|..++. .+.+ ... .+.... ++=+++.+....+......+++|++.++ .|+.+.
T Consensus 14 ~~~~V~NP~T~--~~~~LP~---~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~~~~~~~~Vys~~~~--~Wr~~~ 86 (230)
T TIGR01640 14 KRLVVWNPSTG--QSRWLPT---PKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGNRNQSEHQVYTLGSN--SWRTIE 86 (230)
T ss_pred CcEEEECCCCC--CEEecCC---CCCcccccccceEEEeecccCCcEEEEEEEeecCCCCCccEEEEEeCCC--Cccccc
Confidence 47999999996 5888862 2221 111 111111 1114555544322223457899999999 999987
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEE-EEECCCCCCCCcceeEEEEECCEEEEEcC
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWE-WAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~-w~~~~g~~P~~R~~hsav~~~~~L~V~GG 351 (999)
.... ....... .+..+|.||-+.-..... ....+..||..+. +|. +...+............+.++|+|.++..
T Consensus 87 ~~~~--~~~~~~~-~v~~~G~lyw~~~~~~~~-~~~~IvsFDl~~E-~f~~~i~~P~~~~~~~~~~~L~~~~G~L~~v~~ 161 (230)
T TIGR01640 87 CSPP--HHPLKSR-GVCINGVLYYLAYTLKTN-PDYFIVSFDVSSE-RFKEFIPLPCGNSDSVDYLSLINYKGKLAVLKQ 161 (230)
T ss_pred cCCC--CccccCC-eEEECCEEEEEEEECCCC-CcEEEEEEEcccc-eEeeeeecCccccccccceEEEEECCEEEEEEe
Confidence 4321 1111222 456688888887543221 1235778888766 555 33332211111223456777899888765
Q ss_pred cCCCCCCcccCCeEEEEE-CCCCeEEEcccC
Q 001895 352 ALGGGRMVEDSSSVAVLD-TAAGVWCDTKSV 381 (999)
Q Consensus 352 ~~~~~~~~~~~~~v~vyD-~~t~~W~~v~~~ 381 (999)
..... .-+||+++ -...+|+++-..
T Consensus 162 ~~~~~-----~~~IWvl~d~~~~~W~k~~~i 187 (230)
T TIGR01640 162 KKDTN-----NFDLWVLNDAGKQEWSKLFTV 187 (230)
T ss_pred cCCCC-----cEEEEEECCCCCCceeEEEEE
Confidence 43211 25799986 446679986655
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.046 Score=59.95 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=21.3
Q ss_pred HHHHHHHcCCcEEEEeccccccceEEe
Q 001895 887 VMEFCNNNDLQLIVRAHECVMDGFERF 913 (999)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~ 913 (999)
+.+.|++.++++++-||.=...+.+..
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceee
Confidence 778899999999999998665554443
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.054 Score=63.06 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=52.8
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 001895 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (999)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (999)
.+|.+++|+|-- +..|.++++.+.-...+ -+|+.||+.|+..-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD------~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~ 77 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVD------MILLGGDLFHENKPSRKSLYQVLRSLRLYCLGD 77 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHhhccC
Confidence 468999999932 45677777776433333 5888999999999998888655444332
Q ss_pred -------------------------------CCCCEEEecCCccccc
Q 001895 761 -------------------------------YPNNVHLIRGNHEAAD 776 (999)
Q Consensus 761 -------------------------------~P~~v~llrGNHE~~~ 776 (999)
..--||+|-||||...
T Consensus 78 ~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 78 KPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred CccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999965
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.99 E-value=3 Score=44.20 Aligned_cols=203 Identities=19% Similarity=0.214 Sum_probs=114.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEecccc--CCCCChHHHHHH--HHHhhhcCCCCEEEecCCcc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYV--DRGQHSLETITL--LLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyV--DRG~~s~evl~l--l~~lk~~~P~~v~llrGNHE 773 (999)
.++..+.||||.+..|.++++.......+ -+++.||+. ++|+.- ++..+ +..++. +-..|+.+.||.|
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D------~lviaGDlt~~~~~~~~-~~~~~~~~e~l~~-~~~~v~avpGNcD 75 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRAD------LLVIAGDLTYFHFGPKE-VAEELNKLEALKE-LGIPVLAVPGNCD 75 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCC------EEEEecceehhhcCchH-HHHhhhHHHHHHh-cCCeEEEEcCCCC
Confidence 56899999999999999999887644333 578899999 887643 22222 344442 2358999999988
Q ss_pred ccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCccCcc-c-----CHHHhhhccCC-ccc
Q 001895 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI-N-----HVEQIENLQRP-ITM 846 (999)
Q Consensus 774 ~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~-~-----~~~~i~~i~rp-~~~ 846 (999)
...+-.. .+..+. .+.. -...+++--||-=||..+.- . +-++|....+- ++.
T Consensus 76 ~~~v~~~-------l~~~~~----~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~ 134 (226)
T COG2129 76 PPEVIDV-------LKNAGV----NVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKK 134 (226)
T ss_pred hHHHHHH-------HHhccc----cccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhc
Confidence 7544221 111211 1111 11234444455557876642 1 23445443221 111
Q ss_pred CCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccc
Q 001895 847 EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATN 926 (999)
Q Consensus 847 ~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~ 926 (999)
..+. .-.=++-.-|.. ...+ ++-| ...-|..++.+++++.+-.+.|.||==-..|++.-- =||+-.|.
T Consensus 135 ~~~~-~~Il~~HaPP~g-t~~d----~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG----~TivVNPG 202 (226)
T COG2129 135 ADNP-VNILLTHAPPYG-TLLD----TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIG----NTIVVNPG 202 (226)
T ss_pred ccCc-ceEEEecCCCCC-cccc----CCCC--ccccchHHHHHHHHHhCCceEEEeeecccccccccC----CeEEECCC
Confidence 1110 001112333332 1111 2333 123589999999999999999999844456665421 26776665
Q ss_pred cCCCCCCeEEEEEEcCC
Q 001895 927 YCGTANNAGAILVLGRD 943 (999)
Q Consensus 927 y~~~~~n~ga~l~~~~~ 943 (999)
-.+ .-..|++.+++.
T Consensus 203 ~~~--~g~yA~i~l~~~ 217 (226)
T COG2129 203 PLG--EGRYALIELEKE 217 (226)
T ss_pred Ccc--CceEEEEEecCc
Confidence 432 235688888777
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.045 Score=57.03 Aligned_cols=42 Identities=19% Similarity=0.369 Sum_probs=32.2
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCC----CCEEEecCCccc
Q 001895 733 DYLFLGDYVDRGQHS--LETITLLLALKVEYP----NNVHLIRGNHEA 774 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P----~~v~llrGNHE~ 774 (999)
-+|||||++|.|+.. .|.+..+..++..|. -.++.|.||||.
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDI 92 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDI 92 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCc
Confidence 588999999999853 346777766664433 368899999997
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.092 Score=55.77 Aligned_cols=195 Identities=19% Similarity=0.237 Sum_probs=99.8
Q ss_pred EEecCCCC------HHHHHHHHHHhCCCCCCCCccceeEEEeccccC--CCCC-----hHHHHHHHHHhhhcCCCCEEEe
Q 001895 702 IFGDLHGQ------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD--RGQH-----SLETITLLLALKVEYPNNVHLI 768 (999)
Q Consensus 702 vvGDiHG~------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVD--RG~~-----s~evl~ll~~lk~~~P~~v~ll 768 (999)
.|+|+|=. -+-|+++|+...- ..+ .+.+|||++| +|.. --+|...|..+. .-..+||.+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad------~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i 73 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA-QAD------ALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYI 73 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc-cCc------EEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEe
Confidence 57888844 2344555554322 222 6889999998 3433 234555555443 335689999
Q ss_pred cCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEE---EcCcEEEecCCccCcccC------------
Q 001895 769 RGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAAL---IEKKIICMHGGIGRSINH------------ 833 (999)
Q Consensus 769 rGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~---i~~~il~vHgGi~~~~~~------------ 833 (999)
.||||. .+...++ ...| .+.-+|-..+ -+++++++||-.--....
T Consensus 74 ~GN~Df-ll~~~f~------~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~ 133 (237)
T COG2908 74 HGNHDF-LLGKRFA------QEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWA 133 (237)
T ss_pred cCchHH-HHHHHHH------hhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccH
Confidence 999995 3322221 1112 1233443333 367999999976332100
Q ss_pred HHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCC--ceeeCHHHHHHHHHHcCCcEEEEeccccccceE
Q 001895 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG--LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (999)
Q Consensus 834 ~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~--~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (999)
..++--+.+|+..- ..+..=+|+.-. |........ ..-..+.++.+-++++|++.+|.||.=.+..-.
T Consensus 134 ~~~~lflnl~l~~R---~ri~~k~r~~s~-------~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~ 203 (237)
T COG2908 134 WLQLLFLNLPLRVR---RRIAYKIRSLSS-------WAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHN 203 (237)
T ss_pred HHHHHHHHhHHHHH---HHHHHHHHHhhH-------HhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhcc
Confidence 01111112222200 001111344331 111100000 122467788888999999999999976654443
Q ss_pred EecCCeEEEEecccccC--CCCCCeEEEEEEcCCc
Q 001895 912 RFAQGHLITLFSATNYC--GTANNAGAILVLGRDL 944 (999)
Q Consensus 912 ~~~~~~~iTvFSa~~y~--~~~~n~ga~l~~~~~~ 944 (999)
.- + ..|| |.--..++++.++.+.
T Consensus 204 i~--~--------~~yi~lGdW~~~~s~~~v~~~~ 228 (237)
T COG2908 204 IP--G--------ITYINLGDWVSEGSILEVDDGG 228 (237)
T ss_pred CC--C--------ceEEecCcchhcceEEEEecCc
Confidence 32 1 1232 2222457888887764
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.076 Score=55.26 Aligned_cols=65 Identities=18% Similarity=0.098 Sum_probs=40.5
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH-HHHHHHHHhhhcC---------------------C
Q 001895 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-ETITLLLALKVEY---------------------P 762 (999)
Q Consensus 705 DiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-evl~ll~~lk~~~---------------------P 762 (999)
|++|+=.=|.++++.+-..-.-+ .++||||++|.|--+- |-.....+++..+ .
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd-----~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPD-----AVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGK 98 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCC-----EEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCC
Confidence 44666666777777653322111 6889999999975332 3334444444333 1
Q ss_pred CCEEEecCCccc
Q 001895 763 NNVHLIRGNHEA 774 (999)
Q Consensus 763 ~~v~llrGNHE~ 774 (999)
-.+++|.||||.
T Consensus 99 i~~i~V~GNHDI 110 (193)
T cd08164 99 TPLINIAGNHDV 110 (193)
T ss_pred ceEEEECCcccC
Confidence 357899999998
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=94.59 E-value=14 Score=44.51 Aligned_cols=204 Identities=18% Similarity=0.205 Sum_probs=100.4
Q ss_pred ccCeEEEEECCCCc--EEEecCCCCC---CC------------CCcCcEEEEe--CCEEEEEcccCC-----------CC
Q 001895 148 ATADVHCYDVLTNK--WSRITPFGEP---PT------------PRAAHVATAV--GTMVVIQGGIGP-----------AG 197 (999)
Q Consensus 148 ~~~dv~~yD~~t~~--W~~l~~~g~~---P~------------pR~~hsa~~~--g~~iyv~GG~~~-----------~~ 197 (999)
....+++||..|++ |+.-.....+ |. +....+.++. ++.+|+-.|... ..
T Consensus 173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~ 252 (488)
T cd00216 173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDN 252 (488)
T ss_pred CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCC
Confidence 34678999998765 8764322111 10 1111223332 356666544220 12
Q ss_pred CCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEE-----ECCc--EEEEEccCCCCCCCCeEEEEECCCCCceEEE
Q 001895 198 LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL-----VGQR--YLMAIGGNDGKRPLADVWALDTAAKPYEWRK 270 (999)
Q Consensus 198 ~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v-----~~~~--~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~ 270 (999)
...+.++.+|..+.+.+|..-....+.-.-+......+ +++. .++++|..++ .++.||..+....|+.
T Consensus 253 ~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G-----~l~ald~~tG~~~W~~ 327 (488)
T cd00216 253 LYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNG-----FFYVLDRTTGKLISAR 327 (488)
T ss_pred CceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCc-----eEEEEECCCCcEeeEe
Confidence 23457999999998778986431111100011111111 1221 2445555444 5999999999888986
Q ss_pred cccCCCCCCCccceEEEEEeCCEEEEEeccCCC-----------CCCcccEEEEecCCCCeEEEEECCCCCC------CC
Q 001895 271 LEPEGEGPPPCMYATASARSDGLLLLCGGRDAS-----------SVPLASAYGLAKHRDGRWEWAIAPGVSP------SP 333 (999)
Q Consensus 271 v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~-----------~~~~~d~~~~~~~~~~~W~w~~~~g~~P------~~ 333 (999)
-..... .....+.+|+-...... ......++.++.. +|+-.|....+... .+
T Consensus 328 ~~~~~~----------~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~-tG~~~W~~~~~~~~~~~~~g~~ 396 (488)
T cd00216 328 PEVEQP----------MAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPK-TGKVVWEKREGTIRDSWNIGFP 396 (488)
T ss_pred Eeeccc----------cccCCceEEEccccccccCcccccCCCCCCCceEEEEEeCC-CCcEeeEeeCCccccccccCCc
Confidence 432100 01112556653211100 0112345566554 45666766544110 12
Q ss_pred cceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--EEE
Q 001895 334 RYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (999)
Q Consensus 334 R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--W~~ 377 (999)
......++.++.||+. .. ...+++||.+|++ |+.
T Consensus 397 ~~~~~~~~~g~~v~~g-~~---------dG~l~ald~~tG~~lW~~ 432 (488)
T cd00216 397 HWGGSLATAGNLVFAG-AA---------DGYFRAFDATTGKELWKF 432 (488)
T ss_pred ccCcceEecCCeEEEE-CC---------CCeEEEEECCCCceeeEE
Confidence 2233445556666654 32 2348999998885 663
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=94.49 E-value=2.1 Score=47.55 Aligned_cols=113 Identities=14% Similarity=0.219 Sum_probs=71.4
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec--CCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~--g~~P 225 (999)
-..+..||..+.+|..+... -.... +++... +++||+.|-+.-.+.....+-.||+.+.+ |+.+... ..+|
T Consensus 15 C~~lC~yd~~~~qW~~~g~~---i~G~V-~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~--w~~~~~~~s~~ip 88 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNG---ISGTV-TDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT--WSSLGGGSSNSIP 88 (281)
T ss_pred CCEEEEEECCCCEeecCCCC---ceEEE-EEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe--eeecCCcccccCC
Confidence 45789999999999998643 11111 223333 66888888655444345678889999875 9888742 2456
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEccc
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~ 273 (999)
.+...-+....+...+|+.|... .-..-+.+||= . +|+.+..
T Consensus 89 gpv~a~~~~~~d~~~~~~aG~~~--~g~~~l~~~dG--s--~W~~i~~ 130 (281)
T PF12768_consen 89 GPVTALTFISNDGSNFWVAGRSA--NGSTFLMKYDG--S--SWSSIGS 130 (281)
T ss_pred CcEEEEEeeccCCceEEEeceec--CCCceEEEEcC--C--ceEeccc
Confidence 66543333333444688877752 22345667754 5 8999876
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.086 Score=52.80 Aligned_cols=68 Identities=18% Similarity=0.336 Sum_probs=49.5
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 701 ~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
.|+||+||+++.+.+-++.+.-. .+.+ --+|++||+..-.... +-+.-++.=+.+.|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k--~gpF--d~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKK--KGPF--DALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcc--cCCe--eEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC
Confidence 48999999999998888775321 2222 2578899999866655 3444444456677888999999998
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.081 Score=54.28 Aligned_cols=44 Identities=27% Similarity=0.314 Sum_probs=28.4
Q ss_pred eEEEeccccCCCCCh--HH---HHHHHHHhhhcC-----CCCEEEecCCccccc
Q 001895 733 DYLFLGDYVDRGQHS--LE---TITLLLALKVEY-----PNNVHLIRGNHEAAD 776 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s--~e---vl~ll~~lk~~~-----P~~v~llrGNHE~~~ 776 (999)
.+||+||++|.+... .+ .+..+..+.... ...++++.||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 689999999988743 22 233332322111 346999999999853
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.19 Score=53.57 Aligned_cols=77 Identities=25% Similarity=0.328 Sum_probs=46.0
Q ss_pred Ceeee-cCCeEEEecCCCCHHH----------------HHHHHHHh-CCCCCCCCccceeEEEeccccCCCCC-----hH
Q 001895 692 SVLQL-KAPIKIFGDLHGQFGD----------------LMRLFDEY-GSPSTAGDIAYIDYLFLGDYVDRGQH-----SL 748 (999)
Q Consensus 692 ~~l~~-~~~i~vvGDiHG~~~~----------------L~~il~~~-g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~ 748 (999)
..+.+ ...+.||.|+|==|+. +.+.+..+ .....+ ++|+|||.-.-... ..
T Consensus 13 ~~~~l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~------~lIilGD~KH~~~~~~~~e~~ 86 (235)
T COG1407 13 GVLYLPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPK------RLIILGDLKHEFGKSLRQEKE 86 (235)
T ss_pred ceeEeccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCC------EEEEcCccccccCccccccHH
Confidence 33443 4689999999954433 23333211 111112 79999999874433 34
Q ss_pred HHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 749 ETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 749 evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
|+..++-.++.. .++++|||||...-
T Consensus 87 ~~~~f~~~~~~~---evi~i~GNHD~~i~ 112 (235)
T COG1407 87 EVREFLELLDER---EVIIIRGNHDNGIE 112 (235)
T ss_pred HHHHHHHHhccC---cEEEEeccCCCccc
Confidence 555555444433 59999999998443
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=93.84 E-value=11 Score=45.42 Aligned_cols=112 Identities=16% Similarity=0.170 Sum_probs=61.5
Q ss_pred eEEEEECCCCc--EEEecCCC-CCCCC-CcCcEEEEeC-CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFG-EPPTP-RAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g-~~P~p-R~~hsa~~~g-~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.++.+|..+.+ |+.-.... ....+ -.....++.+ ++||+... ...++.||..+....|..-......+
T Consensus 72 ~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~-------~g~v~AlD~~TG~~~W~~~~~~~~~~ 144 (488)
T cd00216 72 ALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTF-------DGRLVALDAETGKQVWKFGNNDQVPP 144 (488)
T ss_pred cEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecC-------CCeEEEEECCCCCEeeeecCCCCcCc
Confidence 68889988764 88643321 00111 1122234445 67776432 25799999988767798653110000
Q ss_pred CCCcccEEEEECCcEEEEEccCCCC----CCCCeEEEEECCCCCceEEEc
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGK----RPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~----~~~ndv~~yDl~s~~~~W~~v 271 (999)
.-....+.++.++ .+| +|..++. .....++.||..+....|+.-
T Consensus 145 ~~~i~ssP~v~~~-~v~-vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~ 192 (488)
T cd00216 145 GYTMTGAPTIVKK-LVI-IGSSGAEFFACGVRGALRAYDVETGKLLWRFY 192 (488)
T ss_pred ceEecCCCEEECC-EEE-EeccccccccCCCCcEEEEEECCCCceeeEee
Confidence 1012233445554 555 4433221 234679999999988889764
|
The alignment model contains an 8-bladed beta-propeller. |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.15 Score=56.71 Aligned_cols=71 Identities=24% Similarity=0.232 Sum_probs=46.1
Q ss_pred CCeEEEecCCCCHHH--HHHHHHHhCCCCCCCCccceeEEEeccccCC-CCCh-HHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 698 APIKIFGDLHGQFGD--LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR-GQHS-LETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~--L~~il~~~g~~~~~~~~~~~~~vfLGDyVDR-G~~s-~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
.+|+-+.|+|=.... ..+.+........+ -+++.|||+|+ .+.. -.++..|..|+.. -.+|.+.||||
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~D------livltGD~~~~~~~~~~~~~~~~L~~L~~~--~gv~av~GNHd 116 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPD------LIVLTGDYVDGDRPPGVAALALFLAKLKAP--LGVFAVLGNHD 116 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCC------EEEEEeeeecCCCCCCHHHHHHHHHhhhcc--CCEEEEecccc
Confidence 358999999977665 22222222221112 68899999996 5544 4455666666554 57999999998
Q ss_pred ccc
Q 001895 774 AAD 776 (999)
Q Consensus 774 ~~~ 776 (999)
...
T Consensus 117 ~~~ 119 (284)
T COG1408 117 YGV 119 (284)
T ss_pred ccc
Confidence 743
|
|
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=93.19 E-value=2.3 Score=48.73 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=73.0
Q ss_pred CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC------cccE
Q 001895 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP------LASA 310 (999)
Q Consensus 237 ~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~------~~d~ 310 (999)
.+.+|+..+.. ....+||..+. .=...+. .+.+...- .++..+++||+.......... .-++
T Consensus 75 ~gskIv~~d~~------~~t~vyDt~t~--av~~~P~---l~~pk~~p-isv~VG~~LY~m~~~~~~~~~~~~~~~~FE~ 142 (342)
T PF07893_consen 75 HGSKIVAVDQS------GRTLVYDTDTR--AVATGPR---LHSPKRCP-ISVSVGDKLYAMDRSPFPEPAGRPDFPCFEA 142 (342)
T ss_pred cCCeEEEEcCC------CCeEEEECCCC--eEeccCC---CCCCCcce-EEEEeCCeEEEeeccCccccccCccceeEEE
Confidence 34478887654 34889999887 3333332 23334444 444447789999876443211 1123
Q ss_pred EEEec-----CCCCeEEEEECCCCCCCCcc-------eeEEEEE-CCEEEE-EcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 311 YGLAK-----HRDGRWEWAIAPGVSPSPRY-------QHAAVFV-NARLHV-SGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 311 ~~~~~-----~~~~~W~w~~~~g~~P~~R~-------~hsav~~-~~~L~V-~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+.+.. .....|.|...+.. |..+. -.+-+++ +..||| +-|.. .-.|.||+++.+|+
T Consensus 143 l~~~~~~~~~~~~~~w~W~~LP~P-Pf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~---------~GTysfDt~~~~W~ 212 (342)
T PF07893_consen 143 LVYRPPPDDPSPEESWSWRSLPPP-PFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR---------WGTYSFDTESHEWR 212 (342)
T ss_pred eccccccccccCCCcceEEcCCCC-CccccCCcccceEEEEEEecCCeEEEEecCCc---------eEEEEEEcCCccee
Confidence 33331 34568999998763 43332 2344455 667888 33221 23889999999999
Q ss_pred EcccC
Q 001895 377 DTKSV 381 (999)
Q Consensus 377 ~v~~~ 381 (999)
++...
T Consensus 213 ~~GdW 217 (342)
T PF07893_consen 213 KHGDW 217 (342)
T ss_pred eccce
Confidence 99765
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.16 Score=55.22 Aligned_cols=66 Identities=33% Similarity=0.379 Sum_probs=41.9
Q ss_pred CeEEEecCCCCH---------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH-----HHHHHHHHhhhcCCCC
Q 001895 699 PIKIFGDLHGQF---------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-----ETITLLLALKVEYPNN 764 (999)
Q Consensus 699 ~i~vvGDiHG~~---------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-----evl~ll~~lk~~~P~~ 764 (999)
.|+.++|+||.+ ..|.++++...-...+ .-+|..||+++....+. .++..|-++. -.
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~-----~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d 72 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENEN-----TLLLDAGDNFDGSPPSTATKGEANIELMNALG----YD 72 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCC-----eEEEeCCccCCCccchhccCCcHHHHHHHhcC----CC
Confidence 478899999887 4566666665432111 14567999999887643 4455554432 23
Q ss_pred EEEecCCccc
Q 001895 765 VHLIRGNHEA 774 (999)
Q Consensus 765 v~llrGNHE~ 774 (999)
++..||||.
T Consensus 73 -~~~~GNHe~ 81 (252)
T cd00845 73 -AVTIGNHEF 81 (252)
T ss_pred -EEeeccccc
Confidence 345599996
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=92.56 E-value=30 Score=42.18 Aligned_cols=112 Identities=16% Similarity=0.117 Sum_probs=63.6
Q ss_pred eEEEEECCCCc--EEEecCCCC--CC---CCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGE--PP---TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~--~P---~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..|.+ |+.-..... .+ ......+.++.+++||+... ...++.+|..+....|..-. ..
T Consensus 80 ~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~-------dg~l~ALDa~TGk~~W~~~~--~~ 150 (527)
T TIGR03075 80 RVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTL-------DARLVALDAKTGKVVWSKKN--GD 150 (527)
T ss_pred cEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcC-------CCEEEEEECCCCCEEeeccc--cc
Confidence 68889988764 876432210 00 11122334566778776432 24699999988777787643 11
Q ss_pred CCC-CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 224 GPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 224 ~P~-~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
... .....+-++.++ .+|+.........-..+..||.++....|+.-.
T Consensus 151 ~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 151 YKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred ccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 111 112233445666 666643222122345799999999887887653
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=91.66 E-value=34 Score=40.46 Aligned_cols=148 Identities=15% Similarity=0.122 Sum_probs=70.2
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (999)
..+|++|+.+. +...+. ..+..-. +...- ++.+|++....++ ..++|.+|+.+. ....+.....
T Consensus 226 ~~i~~~dl~~g--~~~~l~---~~~g~~~--~~~~SPDG~~la~~~~~~g---~~~Iy~~d~~~~--~~~~Lt~~~~--- 290 (435)
T PRK05137 226 PRVYLLDLETG--QRELVG---NFPGMTF--APRFSPDGRKVVMSLSQGG---NTDIYTMDLRSG--TTTRLTDSPA--- 290 (435)
T ss_pred CEEEEEECCCC--cEEEee---cCCCccc--CcEECCCCCEEEEEEecCC---CceEEEEECCCC--ceEEccCCCC---
Confidence 58999999875 355554 2222111 11222 3335554443333 368999999887 6666644321
Q ss_pred CccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCc
Q 001895 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359 (999)
Q Consensus 280 ~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~ 359 (999)
.........+++-++|...... ...+|.++.... ..+..... ..+.......-+++.+++......
T Consensus 291 --~~~~~~~spDG~~i~f~s~~~g---~~~Iy~~d~~g~-~~~~lt~~----~~~~~~~~~SpdG~~ia~~~~~~~---- 356 (435)
T PRK05137 291 --IDTSPSYSPDGSQIVFESDRSG---SPQLYVMNADGS-NPRRISFG----GGRYSTPVWSPRGDLIAFTKQGGG---- 356 (435)
T ss_pred --ccCceeEcCCCCEEEEEECCCC---CCeEEEEECCCC-CeEEeecC----CCcccCeEECCCCCEEEEEEcCCC----
Confidence 1112233345554445432111 235677765432 22222111 111211112224444444322211
Q ss_pred ccCCeEEEEECCCCeEEEcc
Q 001895 360 EDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 360 ~~~~~v~vyD~~t~~W~~v~ 379 (999)
...++++|+.+..+..+.
T Consensus 357 --~~~i~~~d~~~~~~~~lt 374 (435)
T PRK05137 357 --QFSIGVMKPDGSGERILT 374 (435)
T ss_pred --ceEEEEEECCCCceEecc
Confidence 246999999877665543
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.89 Score=44.99 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=28.5
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccc
Q 001895 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (999)
.+.+|||+.-.-..--+..+++-+| +.+++|++||||--.
T Consensus 48 ~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 48 VLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred eEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 6889999997555444444444443 689999999999744
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.28 Score=51.66 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=43.8
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH-------------------------HHHH
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-------------------------ETIT 752 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-------------------------evl~ 752 (999)
.+|..+.|.||+++.|.++.+.+.-...+ -+||+||++-....+- |.|.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D------~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPD------AVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-S------EEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCC------EEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 46899999999999999998876433333 6899999997554333 3333
Q ss_pred HHHHhhhcCCCCEEEecCCccccch
Q 001895 753 LLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 753 ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
-+|..--..+--+++|.||||....
T Consensus 80 ~ff~~L~~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 80 KFFRILGELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HHHHHHHCC-SEEEEE--TTS-SHH
T ss_pred HHHHHHHhcCCcEEEecCCCCchHH
Confidence 3444334455679999999998543
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.35 Score=57.07 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=39.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH--H-HHHHHHHhhhcCCCCEEEecCCccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL--E-TITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~--e-vl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
-+++|+||+| +-......++.+.....+ -+|++||+++-+.+.- + ...++-.+.... -++.+.||||.
T Consensus 140 ~~f~v~GDlG-~~~~~~~tl~~i~~~~pD------~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~ 210 (427)
T PLN02533 140 IKFAVSGDLG-TSEWTKSTLEHVSKWDYD------VFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHEL 210 (427)
T ss_pred eEEEEEEeCC-CCcccHHHHHHHHhcCCC------EEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccc
Confidence 4589999995 322222333333221111 4788999998654321 1 223333333333 38899999998
Q ss_pred cc
Q 001895 775 AD 776 (999)
Q Consensus 775 ~~ 776 (999)
..
T Consensus 211 ~~ 212 (427)
T PLN02533 211 EK 212 (427)
T ss_pred cc
Confidence 64
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.41 E-value=0.54 Score=52.07 Aligned_cols=64 Identities=25% Similarity=0.261 Sum_probs=37.5
Q ss_pred CeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEE--eccccCCCCCh-----------HH
Q 001895 699 PIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLF--LGDYVDRGQHS-----------LE 749 (999)
Q Consensus 699 ~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vf--LGDyVDRG~~s-----------~e 749 (999)
.|+.++|+||++. .|..+++...-... ..|+ .||+++..+.+ ..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~-------~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~ 74 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENP-------NTLLIDNGDTIQGSPLADYYAKIEDGDPHP 74 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCC-------CeEEEeCCccCCccHHHHHhhhcccCCCCh
Confidence 4788999999973 35556655532211 2333 69999865422 22
Q ss_pred HHHHHHHhhhcCCCCEEEecCCccc
Q 001895 750 TITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 750 vl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
++..|-.+. --++..||||.
T Consensus 75 ~~~~ln~~g-----~d~~~lGNHe~ 94 (277)
T cd07410 75 MIAAMNALG-----YDAGTLGNHEF 94 (277)
T ss_pred HHHHHHhcC-----CCEEeecccCc
Confidence 444444442 12455699996
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=89.25 E-value=9.3 Score=43.78 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=70.3
Q ss_pred eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCC-----CeEE
Q 001895 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPL-----ADVW 257 (999)
Q Consensus 183 ~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~-----ndv~ 257 (999)
.+++|+..+.. ..+.+||..+.. -...+ .++.+...-.++.+++ +||++......... ..++
T Consensus 75 ~gskIv~~d~~-------~~t~vyDt~t~a--v~~~P---~l~~pk~~pisv~VG~-~LY~m~~~~~~~~~~~~~~~~FE 141 (342)
T PF07893_consen 75 HGSKIVAVDQS-------GRTLVYDTDTRA--VATGP---RLHSPKRCPISVSVGD-KLYAMDRSPFPEPAGRPDFPCFE 141 (342)
T ss_pred cCCeEEEEcCC-------CCeEEEECCCCe--EeccC---CCCCCCcceEEEEeCC-eEEEeeccCccccccCccceeEE
Confidence 48899998765 348899998853 33332 3445555556667787 69999876432221 1444
Q ss_pred EE--E------CCCCCceEEEcccCCCCCCCccc---eEEEEEe-CCEEEE-EeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 258 AL--D------TAAKPYEWRKLEPEGEGPPPCMY---ATASARS-DGLLLL-CGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 258 ~y--D------l~s~~~~W~~v~~~~~~P~~r~~---~~a~~~~-~~~Lyv-fGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
++ + .....|.|+.+++.+.....+.. -++.+++ +..|+| .-|.. ...|.||..+. +|++
T Consensus 142 ~l~~~~~~~~~~~~~~w~W~~LP~PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~------~GTysfDt~~~-~W~~ 213 (342)
T PF07893_consen 142 ALVYRPPPDDPSPEESWSWRSLPPPPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR------WGTYSFDTESH-EWRK 213 (342)
T ss_pred EeccccccccccCCCcceEEcCCCCCccccCCcccceEEEEEEecCCeEEEEecCCc------eEEEEEEcCCc-ceee
Confidence 55 3 24567899998764432111110 3333444 677888 33221 24889988866 4443
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=88.94 E-value=0.74 Score=52.98 Aligned_cols=57 Identities=32% Similarity=0.354 Sum_probs=39.5
Q ss_pred HHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCC----CEEEecCCccc
Q 001895 713 LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPN----NVHLIRGNHEA 774 (999)
Q Consensus 713 L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~----~v~llrGNHE~ 774 (999)
|.+.|...-+.-.-+ -.+||||++|-|... -|--....++|..|+. .++.+.||||-
T Consensus 81 lrr~f~~~~~~lkPd-----vvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPD-----VVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCC-----EEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 455665544332221 578899999988743 5556667777776765 68999999998
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=87.46 E-value=70 Score=38.07 Aligned_cols=148 Identities=16% Similarity=0.181 Sum_probs=74.2
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (999)
..+|++|+.+.. -..+. ..+..-. ....- ++.+|++....++ ..++|.+|+.+. +.+++.....
T Consensus 242 ~~L~~~dl~tg~--~~~lt---~~~g~~~--~~~wSPDG~~La~~~~~~g---~~~Iy~~dl~tg--~~~~lt~~~~--- 306 (448)
T PRK04792 242 AEIFVQDIYTQV--REKVT---SFPGING--APRFSPDGKKLALVLSKDG---QPEIYVVDIATK--ALTRITRHRA--- 306 (448)
T ss_pred cEEEEEECCCCC--eEEec---CCCCCcC--CeeECCCCCEEEEEEeCCC---CeEEEEEECCCC--CeEECccCCC---
Confidence 579999998753 44443 2222111 22222 3335665544333 258999999988 7777754321
Q ss_pred CccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCc
Q 001895 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359 (999)
Q Consensus 280 ~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~ 359 (999)
.........+++.++|...... ...+|.++..+. +++.....+.. .......-+++.+++.+....
T Consensus 307 --~~~~p~wSpDG~~I~f~s~~~g---~~~Iy~~dl~~g-~~~~Lt~~g~~----~~~~~~SpDG~~l~~~~~~~g---- 372 (448)
T PRK04792 307 --IDTEPSWHPDGKSLIFTSERGG---KPQIYRVNLASG-KVSRLTFEGEQ----NLGGSITPDGRSMIMVNRTNG---- 372 (448)
T ss_pred --CccceEECCCCCEEEEEECCCC---CceEEEEECCCC-CEEEEecCCCC----CcCeeECCCCCEEEEEEecCC----
Confidence 1112223345544444332111 246777776543 44433222211 111122224544444333221
Q ss_pred ccCCeEEEEECCCCeEEEcc
Q 001895 360 EDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 360 ~~~~~v~vyD~~t~~W~~v~ 379 (999)
...++++|+.+.++..+.
T Consensus 373 --~~~I~~~dl~~g~~~~lt 390 (448)
T PRK04792 373 --KFNIARQDLETGAMQVLT 390 (448)
T ss_pred --ceEEEEEECCCCCeEEcc
Confidence 346999999999887664
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=86.72 E-value=69 Score=37.23 Aligned_cols=147 Identities=19% Similarity=0.194 Sum_probs=73.3
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (999)
..++++|+.+.. ...+. ..+.... +.+.. ++..|++....++ ..++|.+|+.+. ..+.+......
T Consensus 214 ~~i~v~d~~~g~--~~~~~---~~~~~~~--~~~~spDg~~l~~~~~~~~---~~~i~~~d~~~~--~~~~l~~~~~~-- 279 (417)
T TIGR02800 214 PEIYVQDLATGQ--REKVA---SFPGMNG--APAFSPDGSKLAVSLSKDG---NPDIYVMDLDGK--QLTRLTNGPGI-- 279 (417)
T ss_pred cEEEEEECCCCC--EEEee---cCCCCcc--ceEECCCCCEEEEEECCCC---CccEEEEECCCC--CEEECCCCCCC--
Confidence 579999998753 44443 1222111 12222 3335665543333 257999999887 66666543221
Q ss_pred CccceEEEEEeCCE-EEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcCcCCCCC
Q 001895 280 PCMYATASARSDGL-LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGR 357 (999)
Q Consensus 280 ~r~~~~a~~~~~~~-LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~-~~~~L~V~GG~~~~~~ 357 (999)
... .....+++ |++.....+ ...+|.++.... .+......+ .+....++ -+++.+++......
T Consensus 280 --~~~-~~~s~dg~~l~~~s~~~g----~~~iy~~d~~~~-~~~~l~~~~-----~~~~~~~~spdg~~i~~~~~~~~-- 344 (417)
T TIGR02800 280 --DTE-PSWSPDGKSIAFTSDRGG----SPQIYMMDADGG-EVRRLTFRG-----GYNASPSWSPDGDLIAFVHREGG-- 344 (417)
T ss_pred --CCC-EEECCCCCEEEEEECCCC----CceEEEEECCCC-CEEEeecCC-----CCccCeEECCCCCEEEEEEccCC--
Confidence 111 12223554 444333222 235777765543 333222211 12222223 25666666544321
Q ss_pred CcccCCeEEEEECCCCeEEEccc
Q 001895 358 MVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 358 ~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
...|+++|+.+..+..+..
T Consensus 345 ----~~~i~~~d~~~~~~~~l~~ 363 (417)
T TIGR02800 345 ----GFNIAVMDLDGGGERVLTD 363 (417)
T ss_pred ----ceEEEEEeCCCCCeEEccC
Confidence 3469999999987766543
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=86.01 E-value=81 Score=37.30 Aligned_cols=150 Identities=17% Similarity=0.112 Sum_probs=72.8
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (999)
..+|++|+.+.. -..+. ..+.. .......-++.+|++....++ ..++|.+|+.+. +.+++.....
T Consensus 223 ~~i~i~dl~~G~--~~~l~---~~~~~-~~~~~~SPDG~~La~~~~~~g---~~~I~~~d~~tg--~~~~lt~~~~---- 287 (429)
T PRK03629 223 SALVIQTLANGA--VRQVA---SFPRH-NGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS---- 287 (429)
T ss_pred cEEEEEECCCCC--eEEcc---CCCCC-cCCeEECCCCCEEEEEEcCCC---CcEEEEEECCCC--CEEEccCCCC----
Confidence 579999987743 34433 22221 111111223335655443333 246999999887 6676654321
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcc
Q 001895 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360 (999)
Q Consensus 281 r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~ 360 (999)
.........+++.++|...... ...+|.++.... ........+ .........-+++.+++.+....
T Consensus 288 -~~~~~~wSPDG~~I~f~s~~~g---~~~Iy~~d~~~g-~~~~lt~~~----~~~~~~~~SpDG~~Ia~~~~~~g----- 353 (429)
T PRK03629 288 -NNTEPTWFPDSQNLAYTSDQAG---RPQVYKVNINGG-APQRITWEG----SQNQDADVSSDGKFMVMVSSNGG----- 353 (429)
T ss_pred -CcCceEECCCCCEEEEEeCCCC---CceEEEEECCCC-CeEEeecCC----CCccCEEECCCCCEEEEEEccCC-----
Confidence 1122233445655555443221 235676665433 222222111 11111122224554444333221
Q ss_pred cCCeEEEEECCCCeEEEccc
Q 001895 361 DSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 361 ~~~~v~vyD~~t~~W~~v~~ 380 (999)
...++++|++++++..+..
T Consensus 354 -~~~I~~~dl~~g~~~~Lt~ 372 (429)
T PRK03629 354 -QQHIAKQDLATGGVQVLTD 372 (429)
T ss_pred -CceEEEEECCCCCeEEeCC
Confidence 2469999999999887763
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=85.94 E-value=1.9 Score=50.36 Aligned_cols=73 Identities=22% Similarity=0.197 Sum_probs=47.3
Q ss_pred CeEEEecCCCC-------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC---
Q 001895 699 PIKIFGDLHGQ-------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP--- 762 (999)
Q Consensus 699 ~i~vvGDiHG~-------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P--- 762 (999)
++..+.|+|=- +..|..+++.+.--..+ -+|+-||+.|+..-|.+++.++...-.+.-
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD------~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~ 75 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVD------FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAG 75 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCC------EEEEccccccCCCCCHHHHHHHHHHHHHhccCC
Confidence 56778888833 23334444443222222 588899999999988888766554433322
Q ss_pred CCEEEecCCccccch
Q 001895 763 NNVHLIRGNHEAADI 777 (999)
Q Consensus 763 ~~v~llrGNHE~~~~ 777 (999)
--||+|.||||...-
T Consensus 76 Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 76 IPVVVIAGNHDSPSR 90 (390)
T ss_pred CcEEEecCCCCchhc
Confidence 269999999998653
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=84.89 E-value=1.8 Score=47.70 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=19.4
Q ss_pred HHHHHHHHHHcCCcEEEEecccc
Q 001895 884 PDRVMEFCNNNDLQLIVRAHECV 906 (999)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~ 906 (999)
...+.++++++++++++-||.-.
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~ 212 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHN 212 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCccc
Confidence 35788899999999999999654
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=84.83 E-value=6.1 Score=46.33 Aligned_cols=190 Identities=18% Similarity=0.205 Sum_probs=98.4
Q ss_pred CeEEEecCCC-CH----HHHHHHHHHhCCCCCCCCccceeEEE-eccccCC-C-----------CChHHHHHHHHHhhhc
Q 001895 699 PIKIFGDLHG-QF----GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDR-G-----------QHSLETITLLLALKVE 760 (999)
Q Consensus 699 ~i~vvGDiHG-~~----~~L~~il~~~g~~~~~~~~~~~~~vf-LGDyVDR-G-----------~~s~evl~ll~~lk~~ 760 (999)
.+.+++|+|= .. +.+.++++.++.+.. .-...+|+. -||.||- | .+-.|-+..+-.+.-.
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~--~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~ 304 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGD--LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ 304 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcc--cccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence 4788999995 22 334444444443321 112235665 7799993 2 1223444455555444
Q ss_pred CCC--CEEEecCCccccchhhhc-CChHHHHHHhCCccchhhhhhhhhhhcccceeEEE-cCcEEEecCCccCcccCHHH
Q 001895 761 YPN--NVHLIRGNHEAADINALF-GFRIECIERMGERDGIWAWHRINRLFNWLPLAALI-EKKIICMHGGIGRSINHVEQ 836 (999)
Q Consensus 761 ~P~--~v~llrGNHE~~~~~~~~-gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~~~~~~~~~ 836 (999)
-|. .|++..||||..-...-. .|...... +|...+-.|-.=|...-+ +..+|..|| .+++|
T Consensus 305 vp~~I~v~i~PGnhDa~r~a~PQp~~~~~~ks---------lf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidD 369 (481)
T COG1311 305 VPEHIKVFIMPGNHDAVRQALPQPHFPELIKS---------LFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDD 369 (481)
T ss_pred CCCCceEEEecCCCCccccccCCCCcchhhcc---------cccccceEecCCCcEEEECCEEEEEecC------CCHHH
Confidence 555 689999999986543322 23322222 222222111111333333 346777887 35555
Q ss_pred hhhccCCcccCCCC-------------ceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEec
Q 001895 837 IENLQRPITMEAGS-------------IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAH 903 (999)
Q Consensus 837 i~~i~rp~~~~~~~-------------~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H 903 (999)
|...-.......-. +..-+-+|.-|...| +| +++ ---++++-||
T Consensus 370 ii~~vP~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD---------------~l---VIe-----evPDv~~~Gh 426 (481)
T COG1311 370 IIKLVPGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKD---------------YL---VIE-----EVPDVFHTGH 426 (481)
T ss_pred HHhhCCCCCccchHHHHHHHHHhcccCCCCCCccccccCCcC---------------ce---eec-----cCCcEEEEcc
Confidence 54432222211100 122334555554321 01 011 1145678899
Q ss_pred cccccceEEecCCeEEEEecccccCC
Q 001895 904 ECVMDGFERFAQGHLITLFSATNYCG 929 (999)
Q Consensus 904 ~~~~~G~~~~~~~~~iTvFSa~~y~~ 929 (999)
+-. .|+..+.+.++|-.++-+.+..
T Consensus 427 vh~-~g~~~y~gv~~vns~T~q~qTe 451 (481)
T COG1311 427 VHK-FGTGVYEGVNLVNSGTWQEQTE 451 (481)
T ss_pred ccc-cceeEEeccceEEeeeecchhc
Confidence 876 8899888888888888877654
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=84.36 E-value=85 Score=36.16 Aligned_cols=194 Identities=18% Similarity=0.245 Sum_probs=100.5
Q ss_pred eEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.++.+|+.+.. |+...... .....-....-+++||+-...+ .+|+||..+.+..|..-... . .+
T Consensus 79 ~i~A~d~~~g~~~W~~~~~~~---~~~~~~~~~~~~G~i~~g~~~g-------~~y~ld~~~G~~~W~~~~~~---~-~~ 144 (370)
T COG1520 79 NIFALNPDTGLVKWSYPLLGA---VAQLSGPILGSDGKIYVGSWDG-------KLYALDASTGTLVWSRNVGG---S-PY 144 (370)
T ss_pred cEEEEeCCCCcEEecccCcCc---ceeccCceEEeCCeEEEecccc-------eEEEEECCCCcEEEEEecCC---C-eE
Confidence 78889998876 87654310 0011111122256655554432 79999997666789887522 1 34
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
+.-.+ ++.+..+|+.- .-+.++++|..+....|+.-...+ .+ ........+.++.+|+-... . ..
T Consensus 145 ~~~~~-v~~~~~v~~~s------~~g~~~al~~~tG~~~W~~~~~~~-~~--~~~~~~~~~~~~~vy~~~~~----~-~~ 209 (370)
T COG1520 145 YASPP-VVGDGTVYVGT------DDGHLYALNADTGTLKWTYETPAP-LS--LSIYGSPAIASGTVYVGSDG----Y-DG 209 (370)
T ss_pred EecCc-EEcCcEEEEec------CCCeEEEEEccCCcEEEEEecCCc-cc--cccccCceeecceEEEecCC----C-cc
Confidence 44443 33433555532 235789999998888998544332 11 12222222556777764221 1 12
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcce--eEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCC--eEEEcc
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQ--HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCDTK 379 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~--hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~--~W~~v~ 379 (999)
..+.++.. +|+-.|...... +..+.. -...+.++.+++-||..... ....++++|..+. .|..-.
T Consensus 210 ~~~a~~~~-~G~~~w~~~~~~-~~~~~~~~~~~~~~~~~v~v~~~~~~~~----~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 210 ILYALNAE-DGTLKWSQKVSQ-TIGRTAISTTPAVDGGPVYVDGGVYAGS----YGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred eEEEEEcc-CCcEeeeeeeec-ccCcccccccccccCceEEECCcEEEEe----cCCeEEEEEcCCCceEEEEec
Confidence 56666664 445566642211 111111 11344456666666631111 1344888887766 477644
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=83.53 E-value=22 Score=39.58 Aligned_cols=111 Identities=17% Similarity=0.240 Sum_probs=65.7
Q ss_pred CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCC--
Q 001895 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG-- 328 (999)
Q Consensus 252 ~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g-- 328 (999)
....+..||..+. +|..+...-. ..-.+... .++.||+.|-.+-.......+-.|+.... +|....+
T Consensus 14 ~C~~lC~yd~~~~--qW~~~g~~i~-----G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~---~w~~~~~~~ 83 (281)
T PF12768_consen 14 PCPGLCLYDTDNS--QWSSPGNGIS-----GTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ---TWSSLGGGS 83 (281)
T ss_pred CCCEEEEEECCCC--EeecCCCCce-----EEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC---eeeecCCcc
Confidence 4678999999999 9999865522 22333333 47788888766544433445556666655 4544443
Q ss_pred --CCCCCcceeEEEEEC-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 329 --VSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 329 --~~P~~R~~hsav~~~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..|.+-........+ +.+++.|.. ..+ ..-+..| +-.+|..+..
T Consensus 84 s~~ipgpv~a~~~~~~d~~~~~~aG~~-~~g-----~~~l~~~--dGs~W~~i~~ 130 (281)
T PF12768_consen 84 SNSIPGPVTALTFISNDGSNFWVAGRS-ANG-----STFLMKY--DGSSWSSIGS 130 (281)
T ss_pred cccCCCcEEEEEeeccCCceEEEecee-cCC-----CceEEEE--cCCceEeccc
Confidence 234443222222223 467777775 222 3446667 5779999877
|
|
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=83.39 E-value=1.1 Score=53.74 Aligned_cols=70 Identities=20% Similarity=0.222 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHcCCc----EEEEeccccc--cceE-EecCCeEEEE---ecccccCCCCCCeEEEEEEcCCceEEeEEec
Q 001895 883 GPDRVMEFCNNNDLQ----LIVRAHECVM--DGFE-RFAQGHLITL---FSATNYCGTANNAGAILVLGRDLVVVPKLIH 952 (999)
Q Consensus 883 g~~~~~~fl~~~~l~----~iiR~H~~~~--~G~~-~~~~~~~iTv---FSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~ 952 (999)
.++..++.|+..||+ .||-||.+|. +|=. ..++||++.| ||.. |....+ -|++-.|.+...+....-+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TG-IAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTG-IAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccC-ccceEEEecCCcceeccCC
Confidence 577888899999999 9999999996 5644 4689999999 7765 544433 3444444444444444444
Q ss_pred cC
Q 001895 953 PL 954 (999)
Q Consensus 953 ~~ 954 (999)
|.
T Consensus 585 pF 586 (640)
T PF06874_consen 585 PF 586 (640)
T ss_pred CC
Confidence 43
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.32 E-value=1.7 Score=48.60 Aligned_cols=66 Identities=29% Similarity=0.364 Sum_probs=41.1
Q ss_pred CeEEEecCCCCHHH--------------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-h-----HHHHHHHHHhh
Q 001895 699 PIKIFGDLHGQFGD--------------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-S-----LETITLLLALK 758 (999)
Q Consensus 699 ~i~vvGDiHG~~~~--------------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s-----~evl~ll~~lk 758 (999)
.|+.+.|+||++.. |..+++....... ..-+|..||+++..+. + ..++.+|-++.
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~-----~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g 76 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNP-----NSLFVSAGDLIGASPFESALLQDEPTIEALNAMG 76 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCC-----CeEEEeCCcccccccchhhcccCCcHHHHHHhhC
Confidence 47789999998653 5666666543211 1256779999986654 2 24555655553
Q ss_pred hcCCCCEEEecCCccc
Q 001895 759 VEYPNNVHLIRGNHEA 774 (999)
Q Consensus 759 ~~~P~~v~llrGNHE~ 774 (999)
. . .+..||||.
T Consensus 77 ~----D-a~t~GNHef 87 (288)
T cd07412 77 V----D-ASAVGNHEF 87 (288)
T ss_pred C----e-eeeeccccc
Confidence 2 2 355599996
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.68 E-value=43 Score=39.14 Aligned_cols=67 Identities=19% Similarity=0.294 Sum_probs=40.6
Q ss_pred EeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEEC
Q 001895 182 AVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 182 ~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
..++.++++|+-+ .-+-.+|+.+. .......|..-.-|++..+ -.++ +|++-||+||. +-.||+
T Consensus 120 ~~d~t~l~s~sDd------~v~k~~d~s~a---~v~~~l~~htDYVR~g~~~-~~~~-hivvtGsYDg~-----vrl~Dt 183 (487)
T KOG0310|consen 120 PQDNTMLVSGSDD------KVVKYWDLSTA---YVQAELSGHTDYVRCGDIS-PAND-HIVVTGSYDGK-----VRLWDT 183 (487)
T ss_pred ccCCeEEEecCCC------ceEEEEEcCCc---EEEEEecCCcceeEeeccc-cCCC-eEEEecCCCce-----EEEEEe
Confidence 3478999998742 23445666664 2344444444444544322 2333 79999999984 566777
Q ss_pred CCC
Q 001895 262 AAK 264 (999)
Q Consensus 262 ~s~ 264 (999)
.+.
T Consensus 184 R~~ 186 (487)
T KOG0310|consen 184 RSL 186 (487)
T ss_pred ccC
Confidence 766
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=82.61 E-value=76 Score=34.27 Aligned_cols=93 Identities=16% Similarity=0.197 Sum_probs=47.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.++.||+.+.+....-..+ ..+ ...+.. ++.+|+.++. ...+++||+.+.. ....+ +..
T Consensus 53 ~~v~~~d~~~~~~~~~~~~~--~~~---~~~~~~~~g~~l~~~~~~------~~~l~~~d~~~~~-~~~~~------~~~ 114 (300)
T TIGR03866 53 DTIQVIDLATGEVIGTLPSG--PDP---ELFALHPNGKILYIANED------DNLVTVIDIETRK-VLAEI------PVG 114 (300)
T ss_pred CeEEEEECCCCcEEEeccCC--CCc---cEEEECCCCCEEEEEcCC------CCeEEEEECCCCe-EEeEe------eCC
Confidence 36888999887765432221 111 222332 3466666542 2469999998742 11222 111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
...++++...++.+++++..++ +.++.||..+.
T Consensus 115 ~~~~~~~~~~dg~~l~~~~~~~----~~~~~~d~~~~ 147 (300)
T TIGR03866 115 VEPEGMAVSPDGKIVVNTSETT----NMAHFIDTKTY 147 (300)
T ss_pred CCcceEEECCCCCEEEEEecCC----CeEEEEeCCCC
Confidence 2223444444445666665432 24566788665
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.39 E-value=1e+02 Score=36.13 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=76.6
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
|...++++|.. .=+|.||+.+. +-+++.....++..-...-.+...+ .++++-|..| .++.+...|
T Consensus 269 G~~~i~~s~rr------ky~ysyDle~a--k~~k~~~~~g~e~~~~e~FeVShd~-~fia~~G~~G-----~I~lLhakT 334 (514)
T KOG2055|consen 269 GHSVIFTSGRR------KYLYSYDLETA--KVTKLKPPYGVEEKSMERFEVSHDS-NFIAIAGNNG-----HIHLLHAKT 334 (514)
T ss_pred CceEEEecccc------eEEEEeecccc--ccccccCCCCcccchhheeEecCCC-CeEEEcccCc-----eEEeehhhh
Confidence 44578888753 45889999885 4676654333442222222233444 4667777665 455666666
Q ss_pred CCceEEEc-ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe-EEEEECCCCCCCCcceeE-EE
Q 001895 264 KPYEWRKL-EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR-WEWAIAPGVSPSPRYQHA-AV 340 (999)
Q Consensus 264 ~~~~W~~v-~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~-W~w~~~~g~~P~~R~~hs-av 340 (999)
+ .|..- ...+ .....+....+.+||+.||. ..+|.++...+.. -.|....+. ++.+ +.
T Consensus 335 ~--eli~s~KieG-----~v~~~~fsSdsk~l~~~~~~-------GeV~v~nl~~~~~~~rf~D~G~v-----~gts~~~ 395 (514)
T KOG2055|consen 335 K--ELITSFKIEG-----VVSDFTFSSDSKELLASGGT-------GEVYVWNLRQNSCLHRFVDDGSV-----HGTSLCI 395 (514)
T ss_pred h--hhhheeeecc-----EEeeEEEecCCcEEEEEcCC-------ceEEEEecCCcceEEEEeecCcc-----ceeeeee
Confidence 6 55322 1111 23333333445677887764 3577777665522 233333222 2222 23
Q ss_pred EECCEEEEEcCcCCCCCCcccCCeEEEEECCCC
Q 001895 341 FVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (999)
Q Consensus 341 ~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~ 373 (999)
..++.++.+|-.. .-|-+||..+.
T Consensus 396 S~ng~ylA~GS~~---------GiVNIYd~~s~ 419 (514)
T KOG2055|consen 396 SLNGSYLATGSDS---------GIVNIYDGNSC 419 (514)
T ss_pred cCCCceEEeccCc---------ceEEEeccchh
Confidence 3466666666432 23667775543
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=82.10 E-value=2.4 Score=46.43 Aligned_cols=65 Identities=23% Similarity=0.223 Sum_probs=38.6
Q ss_pred CeEEEecCCCCHH----------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-----HHHHHHHHHhhhcCCC
Q 001895 699 PIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETITLLLALKVEYPN 763 (999)
Q Consensus 699 ~i~vvGDiHG~~~----------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl~ll~~lk~~~P~ 763 (999)
.|+-+.|+||++. .|..+++...-.+ ..-+|..||+++..+.+ ..++.+|-.+. -
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~------~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~ 71 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLD------NDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----Y 71 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcC------CEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----C
Confidence 4678999999854 4556666653221 12566799999875533 23333333331 1
Q ss_pred CEEEecCCccc
Q 001895 764 NVHLIRGNHEA 774 (999)
Q Consensus 764 ~v~llrGNHE~ 774 (999)
.+ +..||||.
T Consensus 72 d~-~~~GNHef 81 (257)
T cd07408 72 DA-VTPGNHEF 81 (257)
T ss_pred cE-Eccccccc
Confidence 34 45699996
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.04 E-value=20 Score=41.60 Aligned_cols=130 Identities=14% Similarity=0.167 Sum_probs=71.6
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
.-.-+|.||+.+.+-.++.++...+.+-...=.+...+.++++-|.+ .-++++...+. .|..-- .++..
T Consensus 278 rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~------G~I~lLhakT~--eli~s~---KieG~ 346 (514)
T KOG2055|consen 278 RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN------GHIHLLHAKTK--ELITSF---KIEGV 346 (514)
T ss_pred cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccC------ceEEeehhhhh--hhhhee---eeccE
Confidence 44578999999999999987654442222222333344566665543 35677776664 364332 23333
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEc-ccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL-EPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v-~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~ 301 (999)
-...+....+ ..||+.||.. .||+||+.++ .-... ...+. -..-+-|...++.++..|...
T Consensus 347 v~~~~fsSds-k~l~~~~~~G------eV~v~nl~~~--~~~~rf~D~G~----v~gts~~~S~ng~ylA~GS~~ 408 (514)
T KOG2055|consen 347 VSDFTFSSDS-KELLASGGTG------EVYVWNLRQN--SCLHRFVDDGS----VHGTSLCISLNGSYLATGSDS 408 (514)
T ss_pred EeeEEEecCC-cEEEEEcCCc------eEEEEecCCc--ceEEEEeecCc----cceeeeeecCCCceEEeccCc
Confidence 3333333333 4788888753 7999999886 32221 12222 122223334567766666543
|
|
| >cd00094 HX Hemopexin-like repeats | Back alignment and domain information |
|---|
Probab=81.07 E-value=74 Score=33.13 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=75.2
Q ss_pred EEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec-CCCCCCCcccEEEEECC-cEEEEEccCCCCCCCCeE
Q 001895 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGPRYGHVMALVGQ-RYLMAIGGNDGKRPLADV 256 (999)
Q Consensus 179 sa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~-g~~P~~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv 256 (999)
+++...+++|+|-| +.+|+++.......-..+... +.+|. ... ++..... +++|+|-| +..
T Consensus 11 A~~~~~g~~y~FkG--------~~~w~~~~~~~~~~p~~I~~~w~~~p~-~ID-Aa~~~~~~~~~yfFkg-------~~y 73 (194)
T cd00094 11 AVTTLRGELYFFKG--------RYFWRLSPGKPPGSPFLISSFWPSLPS-PVD-AAFERPDTGKIYFFKG-------DKY 73 (194)
T ss_pred eEEEeCCEEEEEeC--------CEEEEEeCCCCCCCCeEhhhhCCCCCC-Ccc-EEEEECCCCEEEEECC-------CEE
Confidence 34445689999977 367887764211011111110 01222 222 3333332 58999976 368
Q ss_pred EEEECCCCCceEEE---cccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeE----------E
Q 001895 257 WALDTAAKPYEWRK---LEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRW----------E 322 (999)
Q Consensus 257 ~~yDl~s~~~~W~~---v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W----------~ 322 (999)
|+||..+. .+.- +...+.++.+..-.+|.... ++++|+|.|. ..|.|+.... +. .
T Consensus 74 w~~~~~~~--~~~~Pk~i~~~~~~~~~~~iDAA~~~~~~~~~yfFkg~--------~y~ry~~~~~-~v~~~yP~~i~~~ 142 (194)
T cd00094 74 WVYTGKNL--EPGYPKPISDLGFPPTVKQIDAALRWPDNGKTYFFKGD--------KYWRYDEKTQ-KMDPGYPKLIETD 142 (194)
T ss_pred EEEcCccc--ccCCCcchhhcCCCCCCCCccEEEEEcCCCEEEEEeCC--------EEEEEeCCCc-cccCCCCcchhhc
Confidence 88887642 2211 11112211112233444443 6899999772 3455543222 00 1
Q ss_pred EEECCCCCCCCcceeEEEEEC-CEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 323 WAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 323 w~~~~g~~P~~R~~hsav~~~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
|. +. | ..-.++.... +++|+|-| +..|.||..+.+
T Consensus 143 w~---g~-p--~~idaa~~~~~~~~yfF~g-----------~~y~~~d~~~~~ 178 (194)
T cd00094 143 FP---GV-P--DKVDAAFRWLDGYYYFFKG-----------DQYWRFDPRSKE 178 (194)
T ss_pred CC---Cc-C--CCcceeEEeCCCcEEEEEC-----------CEEEEEeCccce
Confidence 21 11 2 2123333344 88999966 358999988776
|
; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 999 | ||||
| 2o8a_A | 329 | Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng | 2e-70 | ||
| 1jk7_A | 323 | Crystal Structure Of The Tumor-Promoter Okadaic Aci | 2e-70 | ||
| 1fjm_A | 330 | Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor | 1e-68 | ||
| 3v4y_A | 306 | Crystal Structure Of The First Nuclear Pp1 Holoenzy | 1e-68 | ||
| 3n5u_B | 300 | Crystal Structure Of An Rb C-Terminal Peptide Bound | 1e-68 | ||
| 3e7a_A | 299 | Crystal Structure Of Protein Phosphatase-1 Bound To | 1e-68 | ||
| 4g9j_A | 331 | Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P | 2e-68 | ||
| 1s70_A | 330 | Complex Between Protein Ser/thr Phosphatase-1 (delt | 4e-68 | ||
| 1u32_A | 293 | Crystal Structure Of A Protein Phosphatase-1: Calci | 2e-67 | ||
| 3egg_A | 329 | Crystal Structure Of A Complex Between Protein Phos | 3e-67 | ||
| 3c5w_C | 310 | Complex Between Pp2a-Specific Methylesterase Pme-1 | 2e-50 | ||
| 2ie4_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-50 | ||
| 2nyl_C | 293 | Crystal Structure Of Protein Phosphatase 2a (Pp2a) | 2e-50 | ||
| 3p71_C | 304 | Crystal Structure Of The Complex Of Lcmt-1 And Pp2a | 2e-50 | ||
| 2ie3_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-50 | ||
| 2iae_C | 309 | Crystal Structure Of A Protein Phosphatase 2a (Pp2a | 6e-50 | ||
| 3fga_C | 309 | Structural Basis Of Pp2a And Sgo Interaction Length | 6e-50 | ||
| 1aui_A | 521 | Human Calcineurin Heterodimer Length = 521 | 1e-41 | ||
| 2p6b_A | 383 | Crystal Structure Of Human Calcineurin In Complex W | 3e-41 | ||
| 1m63_A | 372 | Crystal Structure Of Calcineurin-Cyclophilin-Cyclos | 4e-41 | ||
| 1tco_A | 375 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 4e-41 | ||
| 1mf8_A | 373 | Crystal Structure Of Human Calcineurin Complexed Wi | 4e-41 | ||
| 3ll8_A | 357 | Crystal Structure Of Calcineurin In Complex With Ak | 5e-41 | ||
| 2jog_A | 327 | Structure Of The Calcineurin-Nfat Complex Length = | 5e-41 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 1e-38 | ||
| 3h60_A | 315 | Catalytic Domain Of Human SerineTHREONINE PHOSPHATA | 2e-38 | ||
| 1s95_A | 333 | Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 | 3e-38 | ||
| 3icf_A | 335 | Structure Of Protein SerineTHREONINE PHOSPHATASE FR | 9e-37 |
| >pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 | Back alignment and structure |
|
| >pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 | Back alignment and structure |
|
| >pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 | Back alignment and structure |
|
| >pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 | Back alignment and structure |
|
| >pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 | Back alignment and structure |
|
| >pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 | Back alignment and structure |
|
| >pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 | Back alignment and structure |
|
| >pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 | Back alignment and structure |
|
| >pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 | Back alignment and structure |
|
| >pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 | Back alignment and structure |
|
| >pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 | Back alignment and structure |
|
| >pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 | Back alignment and structure |
|
| >pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 | Back alignment and structure |
|
| >pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 | Back alignment and structure |
|
| >pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 | Back alignment and structure |
|
| >pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 | Back alignment and structure |
|
| >pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 | Back alignment and structure |
|
| >pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 | Back alignment and structure |
|
| >pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 | Back alignment and structure |
|
| >pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 | Back alignment and structure |
|
| >pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 | Back alignment and structure |
|
| >pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 | Back alignment and structure |
|
| >pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
| >pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 | Back alignment and structure |
|
| >pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 | Back alignment and structure |
|
| >pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 999 | |||
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 1e-145 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 1e-139 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 1e-120 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 1e-110 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 1e-109 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 1e-108 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 1e-105 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 1e-100 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 8e-30 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 9e-29 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 6e-27 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 3e-10 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 1e-25 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 5e-08 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 6e-07 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-24 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-19 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 3e-11 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 1e-23 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 1e-19 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 2e-15 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 6e-13 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 2e-23 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 1e-17 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 6e-16 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 1e-22 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 4e-15 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 3e-10 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 7e-06 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 8e-22 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 5e-16 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 7e-05 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 1e-19 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 5e-17 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 3e-13 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 3e-10 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 4e-05 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 4e-13 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 2e-12 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 5e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 3e-06 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 3e-06 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 3e-04 |
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 | Back alignment and structure |
|---|
Score = 433 bits (1116), Expect = e-145
Identities = 145/346 (41%), Positives = 202/346 (58%), Gaps = 27/346 (7%)
Query: 650 KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQ 709
+I LL+ +G +P Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ
Sbjct: 11 SIIGRLLEVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 68
Query: 710 FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIR 769
+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+R
Sbjct: 69 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 770 GNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829
GNHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 123 GNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 178
Query: 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + L DLLWSDP ++ V+G N RG TFG + V +
Sbjct: 179 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVAK 234
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 950 LIHPLPPAISSPETSPERHIEDTWMQELN-ANRPPTPTRGRPQNDR 994
++ P + + + LN RP TP R + +
Sbjct: 295 ILKP----------ADKNKGKYGQFSGLNPGGRPITPPRNSAKAKK 330
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-139
Identities = 138/305 (45%), Positives = 190/305 (62%), Gaps = 16/305 (5%)
Query: 650 KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQ 709
+I LL+ +G +P Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ
Sbjct: 10 SIIGRLLEVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 67
Query: 710 FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIR 769
+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+R
Sbjct: 68 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
Query: 770 GNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829
GNHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 122 GNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 177
Query: 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + L DLLWSDP ++ V+G N RG TFG + V +
Sbjct: 178 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVAK 233
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 234 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 293
Query: 950 LIHPL 954
++ P
Sbjct: 294 ILKPA 298
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 | Back alignment and structure |
|---|
Score = 368 bits (947), Expect = e-120
Identities = 113/299 (37%), Positives = 163/299 (54%), Gaps = 19/299 (6%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
+++ LC+ A+ I + E +V +++ P+ + GD+HGQF DLM LF G +
Sbjct: 26 SQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT------N 79
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGNHE+ I ++GF EC+ + G
Sbjct: 80 YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYG- 138
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-EAGSIV 852
W LF++LPL AL++ +I C+HGG+ SI+ ++ I L R + G
Sbjct: 139 --NANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG--P 194
Query: 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
+ DLLWSDP D G + RG G TFG D F + N L L+ RAH+ VM+G+
Sbjct: 195 MCDLLWSDP---DDRGGWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGYNW 250
Query: 913 FAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIED 971
+++T+FSA NYC N AI+ L L P P E R D
Sbjct: 251 CHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP---RRGEPHVTRRTPD 306
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-110
Identities = 102/331 (30%), Positives = 160/331 (48%), Gaps = 29/331 (8%)
Query: 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK------ 697
I ++ ++ I+ ++ + +L +A + A+ +F EPS+++L+
Sbjct: 9 IKNMSQEFISKMVNDL-----FLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPD 63
Query: 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL 757
I + GD HGQF D++ LF ++G YLF GD+VDRG S E L L
Sbjct: 64 VKISVCGDTHGQFYDVLNLFRKFGKVG-----PKHTYLFNGDFVDRGSWSCEVALLFYCL 118
Query: 758 KVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIE 817
K+ +PNN L RGNHE+ ++N ++GF EC + +R ++ + F LPLA LI
Sbjct: 119 KILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQR----IFNMFAQSFESLPLATLIN 174
Query: 818 KKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNAR 875
+ MHGG+ + +N+ R G M+LLW+DP G+ P+ R
Sbjct: 175 NDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG--AFMELLWADP---QEANGMGPSQR 229
Query: 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935
G G FGPD F NN L+ I R+HE M G + +G L+T+FSA NYC + N G
Sbjct: 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLG 288
Query: 936 AILVLGRDLVVVPKLIHP-LPPAISSPETSP 965
++ + ++ + I + E
Sbjct: 289 GVIHVVPGHGILQAGRNDDQNLIIETFEAVE 319
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 | Back alignment and structure |
|---|
Score = 339 bits (872), Expect = e-109
Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 636 KLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQ 695
KL D +++I+ + K+++ + Q L + + + S ++++
Sbjct: 5 KLEDGKVTISFM-KELMQWY----------KDQKKLHRKCAYQILVQVKEVLSKLSTLVE 53
Query: 696 LK----APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI 751
I + GD HGQF DL+ +F+ G PS Y+F GD+VDRG S+E I
Sbjct: 54 TTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YIFNGDFVDRGSFSVEVI 108
Query: 752 TLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLP 811
L K+ YP++ HL+RGNHE ++N ++GF E + + + + +F WLP
Sbjct: 109 LTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYELFSEVFEWLP 164
Query: 812 LAALIEKKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEG 869
LA I K++ MHGG+ ++ I ++R ++G + DLLWSDP G
Sbjct: 165 LAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG--PMCDLLWSDP---QPQNG 219
Query: 870 LRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCG 929
+ RG FGPD F N+L I+R+HE +G+E G +T+FSA NYC
Sbjct: 220 RSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCD 278
Query: 930 TANNAGAIL 938
N + +
Sbjct: 279 QMGNKASYI 287
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 | Back alignment and structure |
|---|
Score = 338 bits (869), Expect = e-108
Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 33 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 92
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 93 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 146
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 147 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 202
Query: 841 QRPITMEAGSIVLM-DLLWSDPTEN-----DSVEGLRPNARGPGLVTFGPDRVMEFCNNN 894
R E + M D+LWSDP E+ RG + V EF +N
Sbjct: 203 DRFK--EPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHN 259
Query: 895 DLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL 944
+L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 260 NLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 315
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 335 bits (861), Expect = e-105
Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 32/318 (10%)
Query: 627 TPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERI 686
T E + KL D +++I+ + K+++ + Q L + + +
Sbjct: 149 TIEDEYSGPKLEDGKVTISFM-KELMQWY----------KDQKKLHRKCAYQILVQVKEV 197
Query: 687 FSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD 742
S ++++ I + GD HGQF DL+ +F+ G PS Y+F GD+VD
Sbjct: 198 LSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YIFNGDFVD 252
Query: 743 RGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHR 802
RG S+E I L K+ YP++ HL+RGNHE ++N ++GF E + + +
Sbjct: 253 RGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYEL 308
Query: 803 INRLFNWLPLAALIEKKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSD 860
+ +F WLPLA I K++ MHGG+ ++ I ++R ++G + DLLWSD
Sbjct: 309 FSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG--PMCDLLWSD 366
Query: 861 PTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLIT 920
P G + RG FGPD F N+L I+R+HE +G+E G +T
Sbjct: 367 P---QPQNGRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVT 422
Query: 921 LFSATNYCGTANNAGAIL 938
+FSA NYC N + +
Sbjct: 423 VFSAPNYCDQMGNKASYI 440
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 325 bits (834), Expect = e-100
Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 46 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 105
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 106 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 159
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 160 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 215
Query: 841 QRPITMEAGSIVLM-DLLWSDPTEN-----DSVEGLRPNARGPGLVTFGPDRVMEFCNNN 894
R E + M D+LWSDP E+ RG + V EF +N
Sbjct: 216 DRFK--EPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHN 272
Query: 895 DLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL 944
+L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 273 NLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 328
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 8e-30
Identities = 50/251 (19%), Positives = 82/251 (32%), Gaps = 13/251 (5%)
Query: 684 ERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID--YLFLGDYV 741
I P + D+HGQ+ L+ L + + G+ A+ + + GD
Sbjct: 57 SEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF 116
Query: 742 DRGQHSLETITLLLALKVEYP---NNVHLIRGNHEAADINALFGFRIEC---IERMGERD 795
DRG E + + L + VHL+ GNHE + + + + R
Sbjct: 117 DRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP 176
Query: 796 GIWAWHRINRLFNWLPLAALIEK--KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
+ + WL I K ++ MHGGI E + + A
Sbjct: 177 YNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANAL-YRANVDAS 235
Query: 854 MDLLWSDPTENDSVEGLRP-NARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
L +D N G P RG TF + + ++ IV H +
Sbjct: 236 KKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGH-TSQERVLG 294
Query: 913 FAQGHLITLFS 923
+I + S
Sbjct: 295 LFHNKVIAVDS 305
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 9e-29
Identities = 43/287 (14%), Positives = 81/287 (28%), Gaps = 36/287 (12%)
Query: 153 HCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQR 212
++ ++ ++ E P R G V GG P ++ ++ L + +
Sbjct: 367 SEINLTVDEDYQLLE-CECPINRKFGDVDVAGNDVFYMGGSNPYRVN--EILQLSIHYDK 423
Query: 213 PRWHRVVVQ-GPGPGPRYGHVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269
+ V P R H + + + L+ G + L+D W D + EW
Sbjct: 424 IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWS 481
Query: 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV 329
++ +A + DG +L+ GG L Y + + ++
Sbjct: 482 MIKS---LSHTRFRHSACSLPDGNVLILGGVTEGPAML--LYNVTE---EIFKDVTPKDE 533
Query: 330 SPSPRYQHAAVFVNARLH---VSGGALGGGRMVEDSSSVAVLDTAAGVWC-DTKSVVTSP 385
A + + + GG V D + + D + P
Sbjct: 534 FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP 593
Query: 386 RTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
RY + + I GG L D
Sbjct: 594 LFQRYGS----------------QIKYITPRKLLIVGGTSPSGLFDR 624
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-27
Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 54/285 (18%)
Query: 81 VIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGS 140
+ + P R HT T ++ +L+L GG A
Sbjct: 429 IEVSSSEVPVARMCHTFTTISRNN----------QLLLIGGRKAPHQ------------- 465
Query: 141 AGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS 199
+D +D+ T +WS I R H A ++ V+I GG+
Sbjct: 466 -------GLSDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLILGGVTEGP-- 513
Query: 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH---VMALVGQRYLMAIGGNDGKRPLAD- 255
+ + ++T++ + V + V ++ ++ GG + ++D
Sbjct: 514 --AMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569
Query: 256 --VWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGL 313
++ D ++ + + LL+ GG S + +
Sbjct: 570 AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSI 628
Query: 314 AKHRDGRWEWAIAPGVSPSP------RYQHAAVFV-NARLHVSGG 351
P + V +H+ GG
Sbjct: 629 ISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 3e-10
Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 31/195 (15%)
Query: 277 GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ 336
P + + GG + V + + ++ P R
Sbjct: 383 ECPINRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC 442
Query: 337 HAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADA 394
H + N +L + GG + + D + D W S++ S R+
Sbjct: 443 HTFTTISRNNQLLLIGGRKAPHQGLSD---NWIFDMKTREW----SMIKSLSHTRF---- 491
Query: 395 AGGDAAVELTRRCRHAAAAVGD-LIFIYGGLRGG--VLLDDL--LVAEDLAAAETTTAAS 449
RH+A ++ D + I GG+ G +LL ++ + +D+ + S
Sbjct: 492 -------------RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNS 538
Query: 450 HAAAAAAASNVQSRL 464
+A V +
Sbjct: 539 LVSAGLEFDPVSKQG 553
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 53/288 (18%), Positives = 83/288 (28%), Gaps = 49/288 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
V YD T +WS + R + ++ + + GG + + L
Sbjct: 28 SPIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGGYDGRSRLS-SVECL 83
Query: 207 DL-TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265
D + W+ V P R +G + GG DG R + D
Sbjct: 84 DYTADEDGVWYSVA---PMNVRRGLAGATTLGDM-IYVSGGFDGSRRHTSMERYDPNID- 138
Query: 266 YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEW 323
+W L + G++ GG D + L S Y G W
Sbjct: 139 -QWSMLGD----MQTAREGAGLVVASGVIYCLGGYDGLN-ILNSVEKY---DPHTGHWT- 188
Query: 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383
+ P + R +N ++V GG G + SSV + W S+
Sbjct: 189 NVTP--MATKRSGAGVALLNDHIYVVGGFDGTAHL----SSVEAYNIRTDSWTTVTSM-- 240
Query: 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
T RC A + ++ G G LL
Sbjct: 241 -------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 5e-08
Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHVLDLT 209
V YD T W+ +TP T R+ + + V+ G G A L S E ++
Sbjct: 177 VEKYDPHTGHWTNVTPM---ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVE---AYNIR 230
Query: 210 QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269
W V PR ++ R L AI G DG L+ + D W
Sbjct: 231 TDS--WTTV---TSMTTPRCYVGATVLRGR-LYAIAGYDGNSLLSSIECYDPIID--SWE 282
Query: 270 KLEP 273
+
Sbjct: 283 VVTS 286
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 6e-07
Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 32/152 (21%)
Query: 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVN 343
A ++ +LL+ GG + P+ EW+ P + R A+V ++
Sbjct: 7 TRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQ---EWSFLPSI-TRKRRYVASVSLH 62
Query: 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAA---GVWCDTKSVVTSPRTGRYSADAAGGDAA 400
R++V GG G R SSV LD A GVW +
Sbjct: 63 DRIYVIGGYDGRSR----LSSVECLDYTADEDGVWYSVAPM------------------- 99
Query: 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
RR A +GD+I++ GG G
Sbjct: 100 --NVRRGLAGATTLGDMIYVSGGFDGSRRHTS 129
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 50/290 (17%), Positives = 84/290 (28%), Gaps = 52/290 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL--- 203
+ + + Y+ W R+ PR+ VG ++ GG + D
Sbjct: 36 QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSAL 92
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263
+ +W P PR + ++ + A+GG+ G V +
Sbjct: 93 DCYNP--MTNQWSPCA---PMSVPRNRIGVGVIDGH-IYAVGGSHGCIHHNSVERYEPER 146
Query: 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRW 321
EW + P A + LL GG D ++ L SA Y W
Sbjct: 147 D--EWHLVAP----MLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECY---YPERNEW 196
Query: 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381
I + R ++ ++ +GG G ++ +SV D W +
Sbjct: 197 R-MITA--MNTIRSGAGVCVLHNCIYAAGGYDGQDQL----NSVERYDVETETWTFVAPM 249
Query: 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
RR I++ GG G LD
Sbjct: 250 ---------------------KHRRSALGITVHQGRIYVLGGYDGHTFLD 278
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 49/283 (17%), Positives = 77/283 (27%), Gaps = 64/283 (22%)
Query: 159 TNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV 218
++ + PR +H + GG LS L + + W R+
Sbjct: 3 SHHHHHHSS---GLVPRGSHAPKVGRLIYTA-GGYFRQSLS--YLEAYNPSNG--TWLRL 54
Query: 219 VVQGPGPGPRYGHVMALVGQRYLMAIGG----NDGKRPLADVWALDTAAKPYEWRKLEPE 274
PR G +VG L A+GG DG + + + +W P
Sbjct: 55 ---ADLQVPRSGLAGCVVGGL-LYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCAP- 107
Query: 275 GEGPPPCM----YATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWAIAPG 328
M DG + GG S Y + W +AP
Sbjct: 108 -------MSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERY---EPERDEWH-LVAP- 154
Query: 329 VSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTG 388
+ R +N L+ GG G R+ +S W ++
Sbjct: 155 -MLTRRIGVGVAVLNRLLYAVGGFDGTNRL----NSAECYYPERNEWRMITAM------- 202
Query: 389 RYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
T R + + I+ GG G L+
Sbjct: 203 --------------NTIRSGAGVCVLHNCIYAAGGYDGQDQLN 231
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 23/196 (11%)
Query: 146 AGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-GPAGLSAEDLH 204
V Y+ ++W + P T R + ++ GG G L++
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPM---LTRRIGVGVAVLNRLLYAVGGFDGTNRLNS--AE 187
Query: 205 VLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264
+ W + R G + ++ + A GG DG+ L V D +
Sbjct: 188 CYYPERN--EWRMI---TAMNTIRSGAGVCVLHNC-IYAAGGYDGQDQLNSVERYDVETE 241
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324
W + P + G + + GG D + L S D W+
Sbjct: 242 --TWTFVAPM---KHRRSALGITV-HQGRIYVLGGYDGHTF-LDSVECYDPDTD---TWS 291
Query: 325 IAPGVSPSPRYQHAAV 340
+ S R
Sbjct: 292 EVTRM-TSGRSGVGVA 306
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-23
Identities = 59/288 (20%), Positives = 87/288 (30%), Gaps = 50/288 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
A V CYD +W ++ P+ R + +V GG + +
Sbjct: 27 KAIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGGFNGSLRVR-TVDSY 82
Query: 207 DLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY 266
D + + W V R A++ L A+GG DG L+ V A + +
Sbjct: 83 DPVKDQ--WTSVA---NMRDRRSTLGAAVLNGL-LYAVGGFDGSTGLSSVEAYNIKSN-- 134
Query: 267 EWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASA--YGLAKHRDGRWEW 323
EW + P + GLL GG D +S L++ Y W
Sbjct: 135 EWFHVAP----MNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECY---NATTNEWT- 186
Query: 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383
IA + R +N L+ GG G SV V D W +
Sbjct: 187 YIAE--MSTRRSGAGVGVLNNLLYAVGGHDGPLVR----KSVEVYDPTTNAWRQVADM-- 238
Query: 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
R AV L+++ GG G L
Sbjct: 239 -------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 1e-19
Identities = 51/266 (19%), Positives = 88/266 (33%), Gaps = 55/266 (20%)
Query: 173 TPR-AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH 231
+ R + ++V+ GG P + + D ++R WH+V P R
Sbjct: 3 SVRTRLRTPMNLPKLMVVVGGQAPKAIR--SVECYDFKEER--WHQV---AELPSRRCRA 55
Query: 232 VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM----YATAS 287
M + + A+GG +G + V + D +W + M +
Sbjct: 56 GMVYMAGL-VFAVGGFNGSLRVRTVDSYDPVKD--QWTSVAN--------MRDRRSTLGA 104
Query: 288 ARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345
A +GLL GG D S+ L+S Y + W +AP + R V
Sbjct: 105 AVLNGLLYAVGGFDGST-GLSSVEAY---NIKSNEWF-HVAP--MNTRRSSVGVGVVGGL 157
Query: 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTR 405
L+ GG R + S+V + W + + T R
Sbjct: 158 LYAVGGYDVASR--QCLSTVECYNATTNEW----TYIAEMST-----------------R 194
Query: 406 RCRHAAAAVGDLIFIYGGLRGGVLLD 431
R + +L++ GG G ++
Sbjct: 195 RSGAGVGVLNNLLYAVGGHDGPLVRK 220
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 57/284 (20%), Positives = 89/284 (31%), Gaps = 69/284 (24%)
Query: 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHV 205
V YD + ++W+ + R+ A + G + + G G GL S E
Sbjct: 75 RVRTVDSYDPVKDQWTSVANM---RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVE---A 128
Query: 206 LDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDTAA 263
++ W V P R + +VG L A+GG D ++ L+ V +
Sbjct: 129 YNIKSNE--WFHV---APMNTRRSSVGVGVVG-GLLYAVGGYDVASRQCLSTVECYNATT 182
Query: 264 KPYEWRKLEPEGEGPPPCMYATASARS-------DGLLLLCGGRDASSVPLAS--AYGLA 314
EW + M ++ RS + LL GG D V S Y
Sbjct: 183 N--EWTYIAE--------M---STRRSGAGVGVLNNLLYAVGGHDGPLV-RKSVEVYDP- 227
Query: 315 KHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374
W +A R VN L+V GG G + +SV +
Sbjct: 228 --TTNAWR-QVAD--MNMCRRNAGVCAVNGLLYVVGGDDGSCNL----ASVEYYNPTTDK 278
Query: 375 WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
W +VV+S + T R + +
Sbjct: 279 W----TVVSSCMS----------------TGRSYAGVTVIDKRL 302
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 6e-13
Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 24/204 (11%)
Query: 146 AGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAED-LH 204
+ + V Y++ +N+W + P T R++ VG ++ GG A +
Sbjct: 120 STGLSSVEAYNIKSNEWFHVAPM---NTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176
Query: 205 VLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264
+ T W + R G + ++ L A+GG+DG V D
Sbjct: 177 CYNATTN--EWTYI---AEMSTRRSGAGVGVLNNL-LYAVGGHDGPLVRKSVEVYDPTTN 230
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS--AYGLAKHRDGRWE 322
WR++ A A +GLL + GG D S LAS Y +
Sbjct: 231 --AWRQVADM---NMCRRNAGVCA-VNGLLYVVGGDDGSCN-LASVEYYNPTTD-----K 278
Query: 323 WAIAPGVSPSPRYQHAAVFVNARL 346
W + + R ++ RL
Sbjct: 279 WTVVSSCMSTGRSYAGVTVIDKRL 302
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 57/330 (17%), Positives = 95/330 (28%), Gaps = 59/330 (17%)
Query: 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL---HVLD 207
YD N+ + P+ V + GG+ + ED + L
Sbjct: 14 GAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQ 71
Query: 208 LTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG---NDGKRPLADVWALDTAAK 264
W + P P PR + + +GG DG+R L V D +
Sbjct: 72 FDHLDSEWLGMP---PLPSPRCLFGLGEALNS-IYVVGGREIKDGERCLDSVMCYDRLSF 127
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWE 322
+W + +P P +Y L+ + GG+ + L Y + W+
Sbjct: 128 --KWGESDP----LPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD---PKKFEWK 178
Query: 323 WAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382
+AP + R A + R+ V+ G G SS V W ++
Sbjct: 179 -ELAP--MQTARSLFGATVHDGRIIVAAGVTDTGLT----SSAEVYSITDNKWAPFEAF- 230
Query: 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442
R + ++ ++ GG LV +L
Sbjct: 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDI 270
Query: 443 ET--------TTAASHAAAAAAASNVQSRL 464
A AA A+ + RL
Sbjct: 271 WRYNEEEKKWEGVLREIAYAAGATFLPVRL 300
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 45/277 (16%), Positives = 69/277 (24%), Gaps = 57/277 (20%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
P PRC + + + GG +G
Sbjct: 86 PSPRCLF---GLGEALN---------SIYVVGGREIKDGERC------------------ 115
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
V CYD L+ KW P P H + +V + GG G + V D
Sbjct: 116 LDSVMCYDRLSFKWGESDPL---PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW 268
+ W + P R + R ++ G + +W
Sbjct: 173 KKFE--WKEL---APMQTARSLFGATVHDGR-IIVAAGVTDTGLTSSAEVYSITDN--KW 224
Query: 269 RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH-------RDGRW 321
E P + + G L GG + + +W
Sbjct: 225 APFEAF---PQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280
Query: 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
E GV Y A F+ RL+V +
Sbjct: 281 E-----GVLREIAYAAGATFLPVRLNVLRLTKMAENL 312
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 6e-16
Identities = 50/348 (14%), Positives = 93/348 (26%), Gaps = 80/348 (22%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
P+ ++ ++ + GG E N
Sbjct: 33 QVPKNHV---SLVTKEN---------QVFVAGGLFYNEDNKEDP---------------M 65
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL----SAEDL 203
+A +D L ++W + P P+PR ++ V+ G G S
Sbjct: 66 SAYFLQFDHLDSEWLGMPPL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVM-- 120
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVWALDTA 262
D +W P P YGH + + IGG ++ L + D
Sbjct: 121 -CYDRLSF--KWGES---DPLPYVVYGHTVLSHM-DLVYVIGGKGSDRKCLNKMCVYDPK 173
Query: 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS--AYGLAKHRDGR 320
EW++L P A+ DG +++ G + +S Y + D +
Sbjct: 174 KF--EWKELAP---MQTARSLFGATVH-DGRIIVAAGVTDTG-LTSSAEVYSI---TDNK 223
Query: 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC-DTK 379
W P R + V + L+ GG L+ +W +
Sbjct: 224 WA-PFEA--FPQERSSLSLVSLVGTLYAIGG-FATLETESGELVPTELND---IWRYN-- 274
Query: 380 SVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427
++ A + + + +
Sbjct: 275 -----EEEKKWEGVLR--------EIAYAAGATFLPVRLNVLRLTKMA 309
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 1e-22
Identities = 50/295 (16%), Positives = 83/295 (28%), Gaps = 62/295 (21%)
Query: 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLD 207
++ W+ I P R +V I GG + + +
Sbjct: 22 QPQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQLFPIK--RMDCYN 76
Query: 208 LTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVWALDTAAKPY 266
+ + W+ + P PR + + GG G L DT +
Sbjct: 77 VVKDS--WYSKL---GPPTPRDSLAACAAEGK-IYTSGGSEVGNSALYLFECYDTRTE-- 128
Query: 267 EWRKLEPEGEGPPPCM----YATASARSDGLLLLCGGRDASSV---PLASA--YGLAKHR 317
W M + ++GL+ +CGG ++V L S Y
Sbjct: 129 SWHTKPS--------MLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVY---DPA 177
Query: 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377
W + P R H VFV ++ GG G G + +V D W
Sbjct: 178 TETWT-ELCP--MIEARKNHGLVFVKDKIFAVGGQNGLGGL----DNVEYYDIKLNEWKM 230
Query: 378 TKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
+ + AAVG ++++ G +G L
Sbjct: 231 VSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVGRLGH 264
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 4e-15
Identities = 51/265 (19%), Positives = 82/265 (30%), Gaps = 56/265 (21%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG--IGPAGL-SAEDL 203
+ CY+V+ + W PPTPR + A A + GG +G + L E
Sbjct: 67 FPIKRMDCYNVVKDSWYSKLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFE-- 121
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG----KRPLADVWAL 259
D + WH R H M + GG+ G R L
Sbjct: 122 -CYDTRTE--SWHTK---PSMLTQRCSHGMVEAN-GLIYVCGGSLGNNVSGRVLNSCEVY 174
Query: 260 DTAAKPYEWRKLEPEGEGPPPCMYATASARS-------DGLLLLCGGRDASSVPLAS--A 310
D A + W +L P M AR + GG++ L +
Sbjct: 175 DPATE--TWTELCP--------M---IEARKNHGLVFVKDKIFAVGGQNGLGG-LDNVEY 220
Query: 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370
Y + + W+ ++P P V + ++V G G GR+ + +T
Sbjct: 221 YDI---KLNEWK-MVSP--MPWKGVTVKCAAVGSIVYVLAGFQGVGRL----GHILEYNT 270
Query: 371 AAGVWCDTKSVVTSPRTGRYSADAA 395
W + R ++
Sbjct: 271 ETDKW----VANSKVRAFPVTSCLI 291
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 34/194 (17%), Positives = 54/194 (27%), Gaps = 40/194 (20%)
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
+ GG + W + P A D ++ + GG
Sbjct: 15 IALFGG----SQPQSCRYFNPKDY--SWTDIRC----PFEKRRDAACVFWDNVVYILGGS 64
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
+ Y + W + P+PR AA +++ SGG+ G
Sbjct: 65 QLFPIKRMDCYNV---VKDSWY-SKLG--PPTPRDSLAACAAEGKIYTSGGSEVGN---S 115
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DT W S+ LT+RC H LI++
Sbjct: 116 ALYLFECYDTRTESWHTKPSM---------------------LTQRCSHGMVEANGLIYV 154
Query: 421 YGGLRGGVLLDDLL 434
GG G + +L
Sbjct: 155 CGGSLGNNVSGRVL 168
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 25/142 (17%), Positives = 35/142 (24%), Gaps = 43/142 (30%)
Query: 290 SDGLLLLCGGRDASSV----PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345
D + L GG S P +D W P R A VF +
Sbjct: 11 HDYRIALFGGSQPQSCRYFNP----------KDYSWTDIRCP---FEKRRDAACVFWDNV 57
Query: 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTR 405
+++ GG+ + + W T
Sbjct: 58 VYILGGSQLF-----PIKRMDCYNVVKDSWYSKLGP---------------------PTP 91
Query: 406 RCRHAAAAVGDLIFIYGGLRGG 427
R AA A I+ GG G
Sbjct: 92 RDSLAACAAEGKIYTSGGSEVG 113
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 8e-22
Identities = 49/328 (14%), Positives = 90/328 (27%), Gaps = 58/328 (17%)
Query: 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL---HVLDL 208
YD + N+ PR V + GG+ + + + L
Sbjct: 26 AVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQL 83
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPY 266
W + P P R + V + + + G D + L V D A
Sbjct: 84 DNVSSEWVGLP---PLPSARCLFGLGEVDDK-IYVVAGKDLQTEASLDSVLCYDPVAA-- 137
Query: 267 EWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWA 324
+W +++ P +Y +G++ GG+ Y + G W+
Sbjct: 138 KWSEVKN----LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIY---NPKKGDWK-D 189
Query: 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTS 384
+AP +PR ++ ++GG G +SV D W
Sbjct: 190 LAP--MKTPRSMFGVAIHKGKIVIAGGVTEDGLS----ASVEAFDLKTNKWEVMTEF--- 240
Query: 385 PRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAET 444
R + ++ ++ GG L ++
Sbjct: 241 ------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282
Query: 445 --------TTAASHAAAAAAASNVQSRL 464
A+ AS + +RL
Sbjct: 283 YEDDKKEWAGMLKEIRYASGASCLATRL 310
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 5e-16
Identities = 57/372 (15%), Positives = 105/372 (28%), Gaps = 94/372 (25%)
Query: 66 VVGPRCAPTYSVV-NAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA 124
+V A Y + N PR ++ ++ + GG
Sbjct: 20 LVNDTAAVAYDPMENECYLTALAEQIPRNHS---SIVTQQN---------QVYVVGGLYV 67
Query: 125 LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV- 183
E N + D ++++W + P P+ R V
Sbjct: 68 DEENKDQP---------------LQSYFFQLDNVSSEWVGLPPL---PSARCLFGLGEVD 109
Query: 184 GTMVVIQGGIGPAGL----SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
+ V+ G S D +W V P YGH +
Sbjct: 110 DKIYVV-AGKDLQTEASLDSVL---CYDPVAA--KWSEV---KNLPIKVYGHNVISHN-G 159
Query: 240 YLMAIGG-NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-------D 291
+ +GG D K+ V+ + +W+ L P M + RS
Sbjct: 160 MIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAP--------M---KTPRSMFGVAIHK 206
Query: 292 GLLLLCGGRDASSVPLAS--AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349
G +++ GG + AS A+ L + +WE + P R + V + L+
Sbjct: 207 GKIVIAGGVTEDGL-SASVEAFDL---KTNKWE-VMTE--FPQERSSISLVSLAGSLYAI 259
Query: 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRH 409
GG ++ + V D +W ++ R
Sbjct: 260 GGFAMIQLESKEFAPTEVND----IWK------YEDDKKEWAGMLK--------EIRYAS 301
Query: 410 AAAAVGDLIFIY 421
A+ + + ++
Sbjct: 302 GASCLATRLNLF 313
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-GPAGLSAEDLHV 205
G +A V +D+ TNKW +T F P R++ ++ + GG S E
Sbjct: 219 GLSASVEAFDLKTNKWEVMTEF---PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPT 275
Query: 206 LDLTQQRPRWHRVVVQGPGPGPRYGHVMA-LVGQRYLMAIGG 246
+ + G RY + L + L +
Sbjct: 276 EVNDIWKYEDDKKEWAGMLKEIRYASGASCLATRLNLFKLSK 317
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 1e-19
Identities = 42/294 (14%), Positives = 69/294 (23%), Gaps = 70/294 (23%)
Query: 166 TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225
+ E P P + V I G + LD + +W + P
Sbjct: 1 SVLPETPVPFKSGTGAIDNDTVYIGLGSA-----GTAWYKLDTQAKDKKWTAL---AAFP 52
Query: 226 G-PRYGHVMALVGQRYLMAIGG-----NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279
G PR A + L GG + DV + W KL P
Sbjct: 53 GGPRDQATSAFIDGN-LYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLMSH---AP 106
Query: 280 PCMYATASARSDGLLLLCGGRDASS------------------VPLASAYGLAKHRDGRW 321
M + +G + GG + + + + Y K D +
Sbjct: 107 MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFF 166
Query: 322 ------------EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLD 369
+W+ A A V + + G G + AV +
Sbjct: 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLR-----TDAVFE 221
Query: 370 TAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ + + A D + GG
Sbjct: 222 LDFTGNNLKWNKLAPVSSPD---------------GVAGGFAGISNDSLIFAGG 260
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 5e-17
Identities = 51/337 (15%), Positives = 84/337 (24%), Gaps = 67/337 (19%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
GPR T + L +FGG G L
Sbjct: 53 GGPRDQATSAFI------------DGNLYVFGGI----------------GKNSEGLTQV 84
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
DVH Y+ TN W ++ P A HV + GG + + + DL
Sbjct: 85 FNDVHKYNPKTNSWVKLMSH--APMGMAGHVTFVHNGKAYVTGG---VNQNIFNGYFEDL 139
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW 268
+ + + + + + D + + +W
Sbjct: 140 NEAGKDSTAI---DKINAHYFDK--------------KAEDYFFNKFLLSFDPSTQ--QW 180
Query: 269 RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG 328
GE P A L G + + + L + +AP
Sbjct: 181 SYA---GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237
Query: 329 VSPSPRYQHAAVFVNARLHVSG-GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRT 387
SP A N L +G G R + + + +
Sbjct: 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTD---IHLWHN 294
Query: 388 GRYSADAAGGDAAVEL-TRRCRHAAAAVGDLIFIYGG 423
G++ EL R + + + I GG
Sbjct: 295 GKWDKSG-------ELSQGRAYGVSLPWNNSLLIIGG 324
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 3e-13
Identities = 39/259 (15%), Positives = 66/259 (25%), Gaps = 41/259 (15%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGAT------ALEGNSAASGTPSSAGSAG 142
P GH + + GG E + A ++
Sbjct: 106 PMGMAGH---VTFVHNG---------KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153
Query: 143 IRLAGATA-------DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGP 195
A + +D T +WS P A G + G
Sbjct: 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES--PWYGTAGAAVVNKGDKTWLINGEAK 211
Query: 196 AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA----IGGNDGKR 251
GL + + LD T +W+++ P G + + A G+
Sbjct: 212 PGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENY 270
Query: 252 PLADVWALDTAAKPYEWRKLEPE-------GEGPPPCMYATASARSDGLLLLCGGRDASS 304
+A + K Y GE Y S + LL+ GG A
Sbjct: 271 QNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLPWNNSLLIIGGETAGG 329
Query: 305 VPLASAYGLAKHRDGRWEW 323
+ + + +D +
Sbjct: 330 KAVTDSVLI-TVKDNKVTV 347
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 3e-10
Identities = 31/229 (13%), Positives = 53/229 (23%), Gaps = 48/229 (20%)
Query: 278 PPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337
P P T A + + + G ++ W PR Q
Sbjct: 7 PVPFKSGTG-AIDNDTVYIGLGSAGTAW---YKLDTQAKDKK---WTALAAFPGGPRDQA 59
Query: 338 AAVFVNARLHVSGG-ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAG 396
+ F++ L+V GG + + + V + W S G
Sbjct: 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG-------- 111
Query: 397 GDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAA 456
H ++ GG+ + EDL A
Sbjct: 112 ------------HVTFVHNGKAYVTGGVNQNIFNGYF---EDL----NEAGKDSTAIDKI 152
Query: 457 ASNVQSRLPGRYGFVDE-----------RTRQTIPEAAPDGS--VVLGN 492
++ + Y F P G+ V G+
Sbjct: 153 NAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGD 201
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 25/197 (12%), Positives = 43/197 (21%), Gaps = 46/197 (23%)
Query: 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATA 150
G + G + L G G+R T
Sbjct: 190 GTAGAAVVN------------KGDKTWLINGEA----------------KPGLR----TD 217
Query: 151 DVHCYDVLT--NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
V D KW+++ P P + +++ G
Sbjct: 218 AVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYA 277
Query: 209 TQQRPRWHRV----------VVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVW 257
+ + + G R V L+ IGG G + + D
Sbjct: 278 HEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS-LLIIGGETAGGKAVTDSV 336
Query: 258 ALDTAAKPYEWRKLEPE 274
+ + LE
Sbjct: 337 LITVKDNKVTVQNLEHH 353
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 4e-13
Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 22/152 (14%)
Query: 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG 744
+ +++ ++ + + I GD+HG L L D +GD V++G
Sbjct: 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVS-FKQGSDTLV----AVGDLVNKG 60
Query: 745 QHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRIN 804
S + LL L + + GNH+A + + + E + RD + +
Sbjct: 61 PDSFGVVRLLKRL------GAYSVLGNHDAKLLKLVKKLGKK--ECLKGRDAKSSLAPLA 112
Query: 805 R-----LFNWL---PLAA-LIEKKIICMHGGI 827
+ + +L P + ++ H G+
Sbjct: 113 QSIPTDVETYLSQLPHIIRIPAHNVMVAHAGL 144
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 41/212 (19%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GDLHG + +LM D G + D+ +GD VDRG ++E + L+
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDN-KKDLLI----SVGDLVDRGAENVECLELITFP---- 67
Query: 762 PNNVHLIRGNHEAADINALFGFRIEC--------------IERMGERDGIWAWHRINRLF 807
+RGNHE I+ L ++ + L
Sbjct: 68 --WFRAVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKAD--ELP 123
Query: 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSV 867
+ L +KK + H +P+ + ++W+ ++S
Sbjct: 124 LIIEL-VSKDKKYVICHADY------PFDEYEFGKPVDHQ-------QVIWNRERISNSQ 169
Query: 868 EGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
G+ +G FG ++ + I
Sbjct: 170 NGIVKEIKGADTFIFGHTPAVKPLKFANQMYI 201
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 5e-12
Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 18/199 (9%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GD+HG + +L+ L + + D + GD V RG SL+ + + +L
Sbjct: 5 LIGDVHGCYDELIALLHKVE-FTPGKDTLW----LTGDLVARGPGSLDVLRYVKSLG--- 56
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWL---PLAALIEK 818
++V L+ GNH+ + G + + + L NWL PL + E+
Sbjct: 57 -DSVRLVLGNHDLHLLAVFAGIS--RNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEE 113
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
K + M ++ + R + S L + D P RG G
Sbjct: 114 KKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY--GDMPNNWSPELRGLG 171
Query: 879 LVTFGPDRV--MEFCNNND 895
+ F + M FC N
Sbjct: 172 RLRFITNAFTRMRFCFPNG 190
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 3e-10
Identities = 62/399 (15%), Positives = 110/399 (27%), Gaps = 129/399 (32%)
Query: 649 KKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSE--PSVLQLKAPI----KI 702
K +++ F DC ++ D + I S E ++ K + ++
Sbjct: 19 KDILSVFE------DAFVDNF--DCKDVQD---MPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 703 FGDLHGQ--------FGDLM---------RLFDEYGSPSTAGDIAYIDY---------LF 736
F L + +++ + E PS + YI+ +F
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM-YIEQRDRLYNDNQVF 126
Query: 737 LGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796
V R Q L+ LL L+ NV + G + G
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPA--KNV-------------LIDG--------VL---G 160
Query: 797 IWAWHRINRLFNWLPLAALIEKKIIC-MHGGI-----GRSINHVEQIENLQR-------- 842
W+ L + K+ C M I + +E LQ+
Sbjct: 161 SGKT--------WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 843 -----------PITMEAGSIVLMDLLWSDPTEN-----DSVEGLRP-NARGPG---LVTF 882
+ + + L LL S P EN +V+ + NA L+T
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
+V +F L H + + +L Y
Sbjct: 273 RFKQVTDF-----LSAATTTHISLDHHSMTLTPDEVKSLLL--KYLDCRPQ--------- 316
Query: 943 DLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANR 981
DL +P +I + D W + +N ++
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNW-KHVNCDK 354
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 3e-08
Identities = 88/618 (14%), Positives = 160/618 (25%), Gaps = 225/618 (36%)
Query: 460 VQSRLPGRYGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRL 519
V+ L Y F+ + P + MY I + RL
Sbjct: 83 VEEVLRINYKFLMSPIKT--------------EQRQPSMMTRMY--IEQRD-------RL 119
Query: 520 TKGVESLVQASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQMIKPDSAGS 579
+ + + + + A+ + V + D G SGK
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-DGVLG-----SGKT--------- 164
Query: 580 NSIAPAGVRLHHRAVVVAAETGGALGGMVRQLSI-DQFENEGRRVSYG---TPESATAAR 635
VA + + + + + ++ +PE+
Sbjct: 165 ---------------WVALDV-------CLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 636 KLLDRQMSIN-------SVPKKVIAHLLKPRGWKPPVRRQFF----------LDCNEIAD 678
+ L Q+ N S K+ H ++ +RR L +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKSKPYENCLLVLL-----N 252
Query: 679 LCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYL--- 735
+ ++ + F +L + L+ T D+L
Sbjct: 253 VQNA--KA-------------WNAF-NLSCKI--LL----------TTRFKQVTDFLSAA 284
Query: 736 ----FLGDYVDRGQHSLETITLLL-ALKVEY---PNNVHLIRGNHEAADIN----ALFGF 783
D+ E +LLL L P E N ++
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP---------REVLTTNPRRLSIIA- 334
Query: 784 RIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR- 842
E + RDG+ W + L +IE S+N +E E +
Sbjct: 335 -----ESI--RDGLATWDNWKHVNCD-KLTTIIES-----------SLNVLEPAEYRKMF 375
Query: 843 ----------PITMEAGSIVLMDLLWSDPTENDS---VEGLRPN---ARGPGLVTFG-PD 885
I +L L+W D ++D V L + P T P
Sbjct: 376 DRLSVFPPSAHIPTI----LLS-LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
Query: 886 RVMEFC--NNNDLQLIVRAHECVMDGF---ERFAQGHLITLFSAT---NYCG----TANN 933
+E N+ L H ++D + + F LI + ++ G +
Sbjct: 431 IYLELKVKLENEYAL----HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486
Query: 934 AGAILVLGR---DL-VVVPKLIHPLPPAISSPETSP--------ERHIEDTWMQELNANR 981
+ + D + K+ H +S + +I D
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN--------- 537
Query: 982 PPTPTRGRPQNDRVAFMP 999
P R N + F+P
Sbjct: 538 --DPKYERLVNAILDFLP 553
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} Length = 246 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 21/145 (14%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
I D+H L + + G D LGD V G E + L+ L
Sbjct: 8 IISDVHANLVALEAVLSDAGRVD--------DIWSLGDIVGYGPRPRECVELVRVL---- 55
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR----LFNWLPLAALIE 817
+ GNH+ A + ++ + W ++ LP +I+
Sbjct: 56 -APNISVIGNHDWA---CIGRLSLDEFNPVARFASYWTTMQLQAEHLQYLESLPN-RMID 110
Query: 818 KKIICMHGGIGRSINHVEQIENLQR 842
+HG I +
Sbjct: 111 GDWTVVHGSPRHPIWEYIYNARIAA 135
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Length = 252 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 4/104 (3%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
+ + ++ G L G Y LG+ V + E I ++ L
Sbjct: 4 VAVLANIAGNLPALTAALSRIEEMREEGYEIE-KYYILGNIVGLFPYPKEVIEVIKDLTK 62
Query: 760 EYPNNVHLIRGNHEAADINALF-GFRIECIERMGERDGIWAWHR 802
+ NV +IRG ++ + I+++ + +
Sbjct: 63 K--ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALK 104
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Length = 270 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 21/144 (14%), Positives = 39/144 (27%), Gaps = 20/144 (13%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + D+HG L + + A + +Y LGD + G + LL L
Sbjct: 14 IALLSDIHGNTTALEAVLAD------ARQLGVDEYWLLGDILMPGTGRRRILDLLDQL-- 65
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIEC--IERMGERDGIWAWHRI---NRLFNWLPLAA 814
+ GN E + + + +R R + I
Sbjct: 66 ---PITARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQ 122
Query: 815 LIE----KKIICMHGGIGRSINHV 834
+ + H ++
Sbjct: 123 IHRQFGDLTVGISHHLPDKNWGRE 146
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 999 | |||
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 100.0 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 100.0 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 100.0 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 100.0 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 100.0 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 100.0 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 100.0 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 99.97 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 99.96 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.95 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 99.95 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 99.88 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.87 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.76 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.43 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.38 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.25 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.66 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.6 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 98.58 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.33 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.3 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.27 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 97.95 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 97.95 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 97.93 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 97.88 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 97.27 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 97.22 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.03 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.03 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 96.95 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 96.95 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.9 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.83 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 96.8 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.76 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 96.74 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 96.32 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.26 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.18 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.17 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 95.9 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.86 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 95.77 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 95.75 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 95.59 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 95.54 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 95.39 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 95.17 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 95.12 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 95.03 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 94.95 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.87 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 94.42 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 94.42 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 94.33 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 94.27 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 94.26 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 94.22 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 94.02 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 93.96 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 93.95 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 93.71 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 93.55 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 93.55 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 93.17 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 93.16 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 93.1 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 93.1 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 93.05 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 92.91 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 92.62 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 92.5 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 92.07 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 91.91 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 91.69 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 91.59 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 91.26 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 91.21 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 91.06 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 90.75 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 90.7 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 90.68 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 90.33 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 90.32 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 89.96 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 89.95 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 89.59 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 89.58 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 89.55 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 89.45 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 89.26 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 89.13 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 88.74 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 88.12 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 88.12 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 88.04 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 87.74 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 87.7 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 87.41 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 87.34 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 87.01 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 86.8 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 86.72 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 86.71 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 86.49 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 86.4 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 86.31 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 86.29 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 86.22 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 86.18 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 86.1 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 85.11 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 84.84 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 84.68 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 84.66 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 83.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 83.37 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 82.99 | |
| 1qhu_A | 460 | Protein (hemopexin); beta propeller, HAEM binding | 82.74 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 82.65 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 82.48 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 82.23 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 81.84 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 81.15 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 81.09 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 80.58 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 80.28 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 80.17 |
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-71 Score=608.95 Aligned_cols=291 Identities=47% Similarity=0.851 Sum_probs=276.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|++|++.+.|++.. .+.|+++++..||++|+++|++||+++++.+|++||||||||+.+|+++|+..|+++.+
T Consensus 8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCCc--ccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 789999999988776542 45689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.+ ...+|.+|.||.| +.||++++
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~ 231 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 231 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccc--cccCcccCCCCcc-eeeCHHHH
Confidence 9999999999999999999999999999999999999988765 899999999985 3579999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (999)
++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.+++++.+++++|+|.
T Consensus 232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~ 298 (299)
T 3e7a_A 232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 298 (299)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred HHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999874
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-68 Score=591.21 Aligned_cols=319 Identities=44% Similarity=0.785 Sum_probs=274.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|++|++.+.+++. ....|+++++..||++|+++|++||+++++.+|++||||||||+++|+++|+..|+++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 78899999987665543 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+|||.+|++||+.||.+|++||||||.+.++..|||++||.++|+. .+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+++++++++||||||++|.+.++++|+.+.||.+++..+ +++|+|||||.. ...+|.+|.||.+ +.||++++
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~ 232 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 232 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCcc--ccCCcCcccCCCc-eeeChHHH
Confidence 9999999999999999999999999999999999999887654 889999999986 3578999999999 78999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCCCCCCCCCCcc
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPER 967 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (999)
++||+++++++||||||++++||+++++++|||||||||||+.++|+||||.|++++.+.+++|+|.+...
T Consensus 233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~~--------- 303 (330)
T 1fjm_A 233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNK--------- 303 (330)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred HHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecCCcccc---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999876531
Q ss_pred cchhhHHHH-hhcCCCCCCCCCCCCC
Q 001895 968 HIEDTWMQE-LNANRPPTPTRGRPQN 992 (999)
Q Consensus 968 ~~~~~~~~~-~~~~~~~~p~~~~~~~ 992 (999)
....|+.+ ....||+||||++|+.
T Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (330)
T 1fjm_A 304 -GKYGQFSGLNPGGRPITPPRNSAKA 328 (330)
T ss_dssp --------------------------
T ss_pred -cccccccccccccCCCCCCCCcccc
Confidence 01123332 2257999999998863
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-68 Score=583.23 Aligned_cols=291 Identities=32% Similarity=0.581 Sum_probs=271.2
Q ss_pred CChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHH
Q 001895 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDE 719 (999)
Q Consensus 644 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~L~~il~~ 719 (999)
..++++++|+++.+.+ .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~ 81 (315)
T 3h63_A 12 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL 81 (315)
T ss_dssp CHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHH
Confidence 3467899999997753 578999999999999999999999999887 99999999999999999999
Q ss_pred hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhh
Q 001895 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWA 799 (999)
Q Consensus 720 ~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~ 799 (999)
.|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+ ..+
T Consensus 82 ~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~l 152 (315)
T 3h63_A 82 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQM 152 (315)
T ss_dssp HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHH
T ss_pred hCCCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhh----hHH
Confidence 99987652 599999999999999999999999999999999999999999999999999999999995 469
Q ss_pred hhhhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCC
Q 001895 800 WHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878 (999)
Q Consensus 800 ~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~ 878 (999)
|+.+.++|++||+++++++++||||||| ++.+.++++|+++.|+.+++..+ +++|||||||.+ ..+|.+|.||.|
T Consensus 153 ~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~g 228 (315)
T 3h63_A 153 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS 228 (315)
T ss_dssp HHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS
T ss_pred HHHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCC---CCCcCcCCCCce
Confidence 9999999999999999999999999999 78899999999999999887765 899999999985 468999999999
Q ss_pred ceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEc-CCceEEeEEeccCCCC
Q 001895 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPA 957 (999)
Q Consensus 879 ~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~ 957 (999)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|.++ +++...++.|.+.|..
T Consensus 229 -~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~ 307 (315)
T 3h63_A 229 -CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP 307 (315)
T ss_dssp -EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCC
T ss_pred -EEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999996 6788899999887665
Q ss_pred C
Q 001895 958 I 958 (999)
Q Consensus 958 ~ 958 (999)
.
T Consensus 308 ~ 308 (315)
T 3h63_A 308 N 308 (315)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-68 Score=588.57 Aligned_cols=291 Identities=35% Similarity=0.629 Sum_probs=269.9
Q ss_pred CChhHHHHH-HHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC------eEEEecCCCCHHHHHHH
Q 001895 644 INSVPKKVI-AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP------IKIFGDLHGQFGDLMRL 716 (999)
Q Consensus 644 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~------i~vvGDiHG~~~~L~~i 716 (999)
+.++++++| ++|.+.+ .|+++++..||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 556789999 7775532 578999999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccc
Q 001895 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796 (999)
Q Consensus 717 l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~ 796 (999)
|+.+|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||..||.++|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999986542 699999999999999999999999999999999999999999999999999999999995
Q ss_pred hhhhhhhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCC
Q 001895 797 IWAWHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875 (999)
Q Consensus 797 ~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~r 875 (999)
..+|+.+.++|++||+++++++++||||||| +|.+.++++|+.+.|+.+++..+ +++|||||||.+ ..+|.+|.|
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R 229 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR 229 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCC---cCCcccCCC
Confidence 4699999999999999999999999999999 78999999999999999887765 899999999985 468999999
Q ss_pred CCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcC-----------Cc
Q 001895 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-----------DL 944 (999)
Q Consensus 876 g~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~-----------~~ 944 (999)
|.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||||.|++ ++
T Consensus 230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~ 308 (335)
T 3icf_A 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ 308 (335)
T ss_dssp C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred CCc-eeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccC
Confidence 999 689999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred eEEeEEeccCCCCC
Q 001895 945 VVVPKLIHPLPPAI 958 (999)
Q Consensus 945 ~~~~~~~~~~~~~~ 958 (999)
.+.++.|.+.|...
T Consensus 309 ~~~~~~f~~~~~~~ 322 (335)
T 3icf_A 309 NLIIETFEAVEHPD 322 (335)
T ss_dssp TEEEEEECCCCCCS
T ss_pred ceeEEEEecCCCCC
Confidence 99999999877654
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-67 Score=586.63 Aligned_cols=288 Identities=36% Similarity=0.615 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++.+++++++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 788899998753 578999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc----hhHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC----CCCCcc-CCCCCCceee
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~----~~~~~~-n~rg~~~~~f 882 (999)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.+... ..+|.+ +.||+| +.|
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F 247 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCc-eEE
Confidence 9999999999999999999999999999999999999988766 799999999986422 245764 589999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.+++++ +.+++|.+.|.
T Consensus 248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h 326 (357)
T 3ll8_A 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 326 (357)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred ChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEECCc-ceEEEecCCCC
Confidence 9999999999999999999999999999999887 6999999999999999999999998876 67888987766
Q ss_pred CC
Q 001895 957 AI 958 (999)
Q Consensus 957 ~~ 958 (999)
.+
T Consensus 327 p~ 328 (357)
T 3ll8_A 327 PY 328 (357)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-64 Score=560.21 Aligned_cols=287 Identities=39% Similarity=0.726 Sum_probs=269.6
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCC
Q 001895 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA 726 (999)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~ 726 (999)
.++++|++|++.+ .|+++++.+||++|+++|++||+++++..|++||||||||+++|+++|+..+.++.+
T Consensus 9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 78 (309)
T 2ie4_C 9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT 78 (309)
T ss_dssp HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred HHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 4788999997542 589999999999999999999999999999999999999999999999999987765
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhh
Q 001895 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (999)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (999)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||.+||.++||.. .+|+.+.++
T Consensus 79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~ 149 (309)
T 2ie4_C 79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL 149 (309)
T ss_dssp ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred ------EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999863 599999999
Q ss_pred hcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHH
Q 001895 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (999)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (999)
|++||+++++++++|||||||+|.+.++++|+.++|+.+++..+ .++|+|||||.+ ..+|.++.||.| +.||+++
T Consensus 150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~ 224 (309)
T 2ie4_C 150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI 224 (309)
T ss_dssp TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred HHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCcc---ccccccCCCCcc-cccCHHH
Confidence 99999999999999999999999999999999999999887655 789999999985 478999999999 6899999
Q ss_pred HHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001895 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (999)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (999)
+++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+.+++|.|.+..
T Consensus 225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-64 Score=579.83 Aligned_cols=288 Identities=37% Similarity=0.620 Sum_probs=266.5
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++.+|++|++.+ .|+++++.+||++|+++|++||+++++..|++|||||||||++|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 678899987643 578999999999999999999999999999999999999999999999998887755
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||+.||..+|+ ..+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh----hHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 36999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC----CCCCccC-CCCCCceee
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTF 882 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~----~~~~~~n-~rg~~~~~f 882 (999)
++||+++++++++|||||||+|.+.++++|+++.|+.+++..+ +++|||||||.+... ..+|.+| .||+| +.|
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F 260 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 260 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcc-ccc
Confidence 9999999999999999999999999999999999999887765 899999999986421 2568887 79999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.|+++ .+.+++|.+.+.
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~ 339 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 339 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeCC-cceEEEecCCCC
Confidence 9999999999999999999999999999999987 599999999999999999999999988 578899988765
Q ss_pred CC
Q 001895 957 AI 958 (999)
Q Consensus 957 ~~ 958 (999)
.+
T Consensus 340 p~ 341 (521)
T 1aui_A 340 PY 341 (521)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-58 Score=542.94 Aligned_cols=289 Identities=33% Similarity=0.599 Sum_probs=267.6
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHhC
Q 001895 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (999)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~L~~il~~~g 721 (999)
..++++++.+.+.+ .++++++..||.++.++|.+||++++++.| ++||||||||+.+|+++|+..|
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 45778888886542 478999999999999999999999999877 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhh
Q 001895 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (999)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (999)
+++... .|||||||||||++|+||+.+|++||++||.+|++||||||.+.++..|||..||.++|+. .+|+
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 886542 5999999999999999999999999999999999999999999999999999999999975 5999
Q ss_pred hhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCce
Q 001895 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (999)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~ 880 (999)
.+.++|++||+++++++++||||||| ++...++++|+++.|+.+++..+ +++|+|||||.. ..+|.++.||.| +
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~-~ 382 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 382 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS-E
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCc---cCCcCcCCCCCc-e
Confidence 99999999999999999999999999 77888999999999998887654 899999999985 468999999999 5
Q ss_pred eeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEE-cCCceEEeEEeccCCCCC
Q 001895 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLPPAI 958 (999)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~-~~~~~~~~~~~~~~~~~~ 958 (999)
.||++++++||++||+++||||||++++||+++++|+|||||||||||+.++|+||||.| ++++.+.++.|.+.+...
T Consensus 383 ~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (477)
T 1wao_1 383 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 461 (477)
T ss_dssp EECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred eECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999 688999999999876543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=350.40 Aligned_cols=278 Identities=19% Similarity=0.318 Sum_probs=229.6
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
..+..|.+|.+|+++.+ +++||+|||. ... .++++++||+.+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~------------~~~i~v~GG~-~~~---------------------~~~~~~~~d~~~~~W~ 52 (308)
T 1zgk_A 7 HHHSSGLVPRGSHAPKV------------GRLIYTAGGY-FRQ---------------------SLSYLEAYNPSNGTWL 52 (308)
T ss_dssp --------------CCC------------CCCEEEECCB-SSS---------------------BCCCEEEEETTTTEEE
T ss_pred ccccCCeeeCCccccCC------------CCEEEEEeCc-CCC---------------------CcceEEEEcCCCCeEe
Confidence 44567889999999998 7899999998 211 7789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccC---CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~---~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~ 240 (999)
.+..+ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|.+|..|+++++++ +
T Consensus 53 ~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~ 123 (308)
T 1zgk_A 53 RLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCA---PMSVPRNRIGVGVIDG-H 123 (308)
T ss_dssp ECCCC---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT--EEEECC---CCSSCCBTCEEEEETT-E
T ss_pred ECCCC---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC--eEeECC---CCCcCccccEEEEECC-E
Confidence 99654 88999999999999999999984 33445689999999986 599997 8999999999999987 8
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001895 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (999)
Q Consensus 241 Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~ 320 (999)
|||+||.++...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++||++||.++.. .+++++.|+..++
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 194 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM---LTRRIGVGVAV-LNRLLYAVGGFDGTN-RLNSAECYYPERN-- 194 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT--
T ss_pred EEEEcCCCCCcccccEEEECCCCC--eEeECCCC---CccccceEEEE-ECCEEEEEeCCCCCC-cCceEEEEeCCCC--
Confidence 999999988888999999999999 99999765 34455555554 599999999998765 4899999999888
Q ss_pred EEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCc
Q 001895 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAA 400 (999)
Q Consensus 321 W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~ 400 (999)
+|...+.+ |.+|..|++++++++|||+||.+.... .+++++||+++++|+.+..+
T Consensus 195 -~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~------------------- 249 (308)
T 1zgk_A 195 -EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQDQ----LNSVERYDVETETWTFVAPM------------------- 249 (308)
T ss_dssp -EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSSB----CCCEEEEETTTTEEEECCCC-------------------
T ss_pred -eEeeCCCC-CCccccceEEEECCEEEEEeCCCCCCc----cceEEEEeCCCCcEEECCCC-------------------
Confidence 77777655 789999999999999999999875432 78999999999999999876
Q ss_pred cCCCCcceeEEEEECCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 401 ~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
|.+|..|++++++++|||+||+++...+++++++|...
T Consensus 250 --p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 250 --KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp --SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred --CCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 67999999999999999999998888899999999754
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=332.62 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=224.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
+++||+|||.... .++++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 15 ~~~i~v~GG~~~~----------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 15 PKLMVVVGGQAPK----------------------AIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp CEEEEEECCBSSS----------------------BCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESC
T ss_pred CCEEEEECCCCCC----------------------CCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeC
Confidence 5789999997531 677999999999999999765 889999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
.... ...+++++||+.++ +|+.++ ++|.+|+.|+++++++ +|||+||.++...++++|+||+.++ +|+.+.
T Consensus 70 ~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~ 140 (302)
T 2xn4_A 70 FNGS-LRVRTVDSYDPVKD--QWTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVA 140 (302)
T ss_dssp BCSS-SBCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEEC
T ss_pred cCCC-ccccceEEECCCCC--ceeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecC
Confidence 8643 45689999999986 599997 8999999999999988 8999999988888999999999999 999997
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCC-CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcC
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~-~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG 351 (999)
+++ .+|..|.+ +..+++||++||.+... ..+++++.|+..++ +|.....+ |.+|..|++++++++|||+||
T Consensus 141 ~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 141 PMN---TRRSSVGV-GVVGGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CCS---SCCBSCEE-EEETTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCC---CcccCceE-EEECCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECC
Confidence 654 34555544 55699999999987654 34789999999887 66666554 789999999999999999999
Q ss_pred cCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcCcC
Q 001895 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (999)
Q Consensus 352 ~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~ 431 (999)
.++.. ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||.++...++
T Consensus 213 ~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 213 HDGPL----VRKSVEVYDPTTNAWRQVADM---------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp BSSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCc----ccceEEEEeCCCCCEeeCCCC---------------------CCccccCeEEEECCEEEEECCcCCCcccc
Confidence 87643 268899999999999999876 56899999999999999999998888899
Q ss_pred cEEEeeccc
Q 001895 432 DLLVAEDLA 440 (999)
Q Consensus 432 Dv~~ld~~~ 440 (999)
+++++|...
T Consensus 268 ~v~~yd~~~ 276 (302)
T 2xn4_A 268 SVEYYNPTT 276 (302)
T ss_dssp CEEEEETTT
T ss_pred cEEEEcCCC
Confidence 999998754
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=331.74 Aligned_cols=258 Identities=19% Similarity=0.299 Sum_probs=224.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
.+.||+|||.. ..+++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 11 ~~~l~~~GG~~------------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 63 (306)
T 3ii7_A 11 HDYRIALFGGS------------------------QPQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGG 63 (306)
T ss_dssp CCEEEEEECCS------------------------STTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECC
T ss_pred cceEEEEeCCC------------------------CCceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeC
Confidence 47899999964 256999999999999999765 789999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCC-CCCCCCeEEEEECCCCCceEEEc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
.. ....+++++||+.++ +|+.++ ++|.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+
T Consensus 64 ~~--~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~ 133 (306)
T 3ii7_A 64 SQ--LFPIKRMDCYNVVKD--SWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTK 133 (306)
T ss_dssp BS--SSBCCEEEEEETTTT--EEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEE
T ss_pred CC--CCCcceEEEEeCCCC--eEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeC
Confidence 87 566799999999986 599997 8999999999999987 899999997 6677999999999999 99999
Q ss_pred ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC---cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEE
Q 001895 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP---LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (999)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~---~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V 348 (999)
.+++ .+|..|.+ +..+++||++||.+..... +++++.|+..++ +|...+.+ |.+|..|++++++++|||
T Consensus 134 ~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 134 PSML---TQRCSHGM-VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp CCCS---SCCBSCEE-EEETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEE
T ss_pred CCCc---CCcceeEE-EEECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEE
Confidence 7653 44555555 4569999999998766533 899999999988 66676654 789999999999999999
Q ss_pred EcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCc
Q 001895 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGV 428 (999)
Q Consensus 349 ~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~ 428 (999)
+||.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++..
T Consensus 206 ~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 206 VGGQNGLG----GLDNVEYYDIKLNEWKMVSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp ECCEETTE----EBCCEEEEETTTTEEEECCCC---------------------SCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred EeCCCCCC----CCceEEEeeCCCCcEEECCCC---------------------CCCccceeEEEECCEEEEEeCcCCCe
Confidence 99987653 268899999999999999876 67999999999999999999998888
Q ss_pred CcCcEEEeeccc
Q 001895 429 LLDDLLVAEDLA 440 (999)
Q Consensus 429 ~l~Dv~~ld~~~ 440 (999)
.+++++++|...
T Consensus 261 ~~~~~~~yd~~~ 272 (306)
T 3ii7_A 261 RLGHILEYNTET 272 (306)
T ss_dssp BCCEEEEEETTT
T ss_pred eeeeEEEEcCCC
Confidence 899999999754
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=327.98 Aligned_cols=262 Identities=21% Similarity=0.327 Sum_probs=225.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
+++||+|||...... .++++++||+.+++|..++.+ |.+|.+|++++++++||++||
T Consensus 14 ~~~i~~~GG~~~~~~--------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS--------------------PIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTTE--------------------ECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCCc--------------------ceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcC
Confidence 679999999432221 788999999999999999865 789999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCc---eEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEE
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPR---WHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~k---W~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~ 269 (999)
.. .....+++++||+.++ + |+.++ ++|.+|..|+++++++ +||++||.++...++++|+||+.++ +|+
T Consensus 71 ~~-~~~~~~~~~~~d~~~~--~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~ 141 (301)
T 2vpj_A 71 YD-GRSRLSSVECLDYTAD--EDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWS 141 (301)
T ss_dssp BC-SSCBCCCEEEEETTCC--TTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEE
T ss_pred CC-CCccCceEEEEECCCC--CCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEE
Confidence 86 3456789999999885 6 99996 8999999999999987 8999999998888999999999999 999
Q ss_pred EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEE
Q 001895 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349 (999)
Q Consensus 270 ~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~ 349 (999)
.+.+++ .+|..|.++ ..+++||++||.++.. .+++++.|++.++ +|.....+ |.+|..|+++.++++|||+
T Consensus 142 ~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~ 212 (301)
T 2vpj_A 142 MLGDMQ---TAREGAGLV-VASGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVV 212 (301)
T ss_dssp EEEECS---SCCBSCEEE-EETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEE
T ss_pred ECCCCC---CCcccceEE-EECCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEE
Confidence 997654 345555554 5599999999987765 6899999999887 66666554 7899999999999999999
Q ss_pred cCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcC
Q 001895 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVL 429 (999)
Q Consensus 350 GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~ 429 (999)
||.+.... .+++++||+++++|..+..+ |.+|+.|++++++++|||+||+++...
T Consensus 213 GG~~~~~~----~~~v~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~ 267 (301)
T 2vpj_A 213 GGFDGTAH----LSSVEAYNIRTDSWTTVTSM---------------------TTPRCYVGATVLRGRLYAIAGYDGNSL 267 (301)
T ss_dssp CCBCSSSB----CCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSB
T ss_pred eCCCCCcc----cceEEEEeCCCCcEEECCCC---------------------CCcccceeEEEECCEEEEEcCcCCCcc
Confidence 99876542 78999999999999999876 679999999999999999999988888
Q ss_pred cCcEEEeeccc
Q 001895 430 LDDLLVAEDLA 440 (999)
Q Consensus 430 l~Dv~~ld~~~ 440 (999)
+++++++|...
T Consensus 268 ~~~v~~yd~~~ 278 (301)
T 2vpj_A 268 LSSIECYDPII 278 (301)
T ss_dssp EEEEEEEETTT
T ss_pred cccEEEEcCCC
Confidence 89999999653
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=342.52 Aligned_cols=280 Identities=18% Similarity=0.209 Sum_probs=223.0
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECC--CCcEE
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TNKWS 163 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~--t~~W~ 163 (999)
...|.+|.+|+++.+ +++||||||.. .+++|+||+. +++|+
T Consensus 4 ~~lP~~r~~~~~~~~------------~~~iyv~GG~~-------------------------~~~~~~~d~~~~~~~W~ 46 (357)
T 2uvk_A 4 PETPVPFKSGTGAID------------NDTVYIGLGSA-------------------------GTAWYKLDTQAKDKKWT 46 (357)
T ss_dssp CCCSSCCCSCEEEEE------------TTEEEEECGGG-------------------------TTCEEEEETTSSSCCEE
T ss_pred CCCCccccceEEEEE------------CCEEEEEeCcC-------------------------CCeEEEEccccCCCCee
Confidence 467999999999998 79999999963 2489999998 49999
Q ss_pred EecCCCCCC-CCCcCcEEEEeCCEEEEEcccC----CCCCCcCcEEEEecCCCCCceEEEeecCCCC-CCCcccEEEEEC
Q 001895 164 RITPFGEPP-TPRAAHVATAVGTMVVIQGGIG----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG 237 (999)
Q Consensus 164 ~l~~~g~~P-~pR~~hsa~~~g~~iyv~GG~~----~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P-~~R~~h~~~v~~ 237 (999)
.++.+ | .+|.+|++++++++||||||.+ ......+++|+||+.++ +|+.++ +++ .+|++|++++++
T Consensus 47 ~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~---~~~p~~r~~~~~~~~~ 118 (357)
T 2uvk_A 47 ALAAF---PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLM---SHAPMGMAGHVTFVHN 118 (357)
T ss_dssp ECCCC---TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT--EEEECS---CCCSSCCSSEEEEEET
T ss_pred ECCCC---CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC--cEEECC---CCCCcccccceEEEEC
Confidence 99876 6 7999999999999999999982 23345789999999996 599998 444 999999999988
Q ss_pred CcEEEEEccCCCC----------------------------------CCCCeEEEEECCCCCceEEEcccCCCCCCCccc
Q 001895 238 QRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (999)
Q Consensus 238 ~~~Lyv~GG~~g~----------------------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~ 283 (999)
+ +|||+||.++. ..++++++||+.++ +|+.+.+++ .+++.
T Consensus 119 ~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p---~~~~~ 192 (357)
T 2uvk_A 119 G-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESP---WYGTA 192 (357)
T ss_dssp T-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECS---SCCCB
T ss_pred C-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCC---CCCcc
Confidence 7 89999998754 25789999999999 999997653 34566
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEec--CCCCeEEEEECCCCC-CCCcceeEEEEECCEEEEEcCcCCCCC---
Q 001895 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGVS-PSPRYQHAAVFVNARLHVSGGALGGGR--- 357 (999)
Q Consensus 284 ~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~--~~~~~W~w~~~~g~~-P~~R~~hsav~~~~~L~V~GG~~~~~~--- 357 (999)
++++++.+++||+|||.+......++++.|+. .++ +|.....++ |..|..|++++++++|||+||.+..+.
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 269 (357)
T 2uvk_A 193 GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSREN 269 (357)
T ss_dssp SCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHH
T ss_pred cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccc
Confidence 56666679999999998766556788988875 545 666666542 345678889999999999999754321
Q ss_pred ----------CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC
Q 001895 358 ----------MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427 (999)
Q Consensus 358 ----------~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~ 427 (999)
.....+++++||+++++|+.+..+ |.+|+.|++++++++||||||++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL---------------------SQGRAYGVSLPWNNSLLIIGGETAG 328 (357)
T ss_dssp HHTTCSSTTTTCCCEECCEEEECC---CEEEEEC---------------------SSCCBSSEEEEETTEEEEEEEECGG
T ss_pred ccccceeccccccceeeEEEEecCCCceeeCCCC---------------------CCCcccceeEEeCCEEEEEeeeCCC
Confidence 011246799999999999999877 6799999999999999999998754
Q ss_pred -cCcCcEEEeeccc
Q 001895 428 -VLLDDLLVAEDLA 440 (999)
Q Consensus 428 -~~l~Dv~~ld~~~ 440 (999)
..++|++.++...
T Consensus 329 ~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 329 GKAVTDSVLITVKD 342 (357)
T ss_dssp GCEEEEEEEEEC-C
T ss_pred CCEeeeEEEEEEcC
Confidence 4589999887653
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=321.73 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=216.2
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEe
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l 165 (999)
...|.+|.+|+++.+ +++||||||..... .++++++||+.+++|+.+
T Consensus 46 ~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~---------------------~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 46 AELPSRRCRAGMVYM------------AGLVFAVGGFNGSL---------------------RVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCCSSCCBSCEEEEE------------TTEEEEESCBCSSS---------------------BCCCEEEEETTTTEEEEE
T ss_pred ccCCcccccceEEEE------------CCEEEEEeCcCCCc---------------------cccceEEECCCCCceeeC
Confidence 578999999999988 78999999986432 678999999999999999
Q ss_pred cCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEc
Q 001895 166 TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (999)
Q Consensus 166 ~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~G 245 (999)
..+ |.+|..|++++++++||++||... ....+++++||+.++ +|+.++ ++|.+|+.|+++++++ +||++|
T Consensus 93 ~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 162 (302)
T 2xn4_A 93 ANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSN--EWFHVA---PMNTRRSSVGVGVVGG-LLYAVG 162 (302)
T ss_dssp CCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEEEC
T ss_pred CCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCC--eEeecC---CCCCcccCceEEEECC-EEEEEe
Confidence 875 789999999999999999999864 345689999999986 599997 8899999999999988 899999
Q ss_pred cCCCCC--CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 246 GNDGKR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 246 G~~g~~--~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
|.++.. .++++++||+.++ +|+.+.++ |.+|..| ++++.+++||++||.++.. ..++++.|+..++ +|
T Consensus 163 G~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~-~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 232 (302)
T 2xn4_A 163 GYDVASRQCLSTVECYNATTN--EWTYIAEM---STRRSGA-GVGVLNNLLYAVGGHDGPL-VRKSVEVYDPTTN---AW 232 (302)
T ss_dssp CEETTTTEECCCEEEEETTTT--EEEEECCC---SSCCBSC-EEEEETTEEEEECCBSSSS-BCCCEEEEETTTT---EE
T ss_pred CCCCCCCccccEEEEEeCCCC--cEEECCCC---ccccccc-cEEEECCEEEEECCCCCCc-ccceEEEEeCCCC---CE
Confidence 997654 4899999999999 99999765 3445555 4455699999999987654 5789999999887 66
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc-cCcCCCCCCCcccccCCCCCccC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK-SVVTSPRTGRYSADAAGGDAAVE 402 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~-~~~~~p~~~~~~~~~~~~~~~~~ 402 (999)
.....+ |.+|..|+++.++++|||+||.+... ..+++++||+++++|+.++ .+
T Consensus 233 ~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~--------------------- 286 (302)
T 2xn4_A 233 RQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCM--------------------- 286 (302)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCC---------------------
T ss_pred eeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCccc---------------------
Confidence 666654 68999999999999999999987543 2789999999999999987 44
Q ss_pred CCCcceeEEEEECCEE
Q 001895 403 LTRRCRHAAAAVGDLI 418 (999)
Q Consensus 403 p~~R~~hsa~~~~~~L 418 (999)
|.+|+.|++++++++|
T Consensus 287 ~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 287 STGRSYAGVTVIDKRL 302 (302)
T ss_dssp SSCCBSCEEEEEEC--
T ss_pred CcccccceEEEecccC
Confidence 6799999999998765
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=321.46 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=219.6
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
.....|.+|.+|+++.+ +++||||||.. .. .++++++||+.+++|+
T Consensus 38 ~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~-~~---------------------~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 38 DIRCPFEKRRDAACVFW------------DNVVYILGGSQ-LF---------------------PIKRMDCYNVVKDSWY 83 (306)
T ss_dssp ECCCCSCCCBSCEEEEE------------TTEEEEECCBS-SS---------------------BCCEEEEEETTTTEEE
T ss_pred cCCCCCcccceeEEEEE------------CCEEEEEeCCC-CC---------------------CcceEEEEeCCCCeEE
Confidence 44578999999999998 78999999986 21 7889999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA 243 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv 243 (999)
.+..+ |.+|.+|++++++++|||+||........+++++||+.++ +|+.++ ++|.+|+.|+++++++ +||+
T Consensus 84 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv 154 (306)
T 3ii7_A 84 SKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKP---SMLTQRCSHGMVEANG-LIYV 154 (306)
T ss_dssp EEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEE
T ss_pred ECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCC---CCcCCcceeEEEEECC-EEEE
Confidence 99775 8999999999999999999998756667899999999986 599996 8999999999999988 8999
Q ss_pred EccCCCCCC----CCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 244 IGGNDGKRP----LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 244 ~GG~~g~~~----~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
+||.++... ++++|+||+.++ +|+.+.+++ .+|..|.++ ..+++||++||.+... .+++++.|+..++
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~i~v~GG~~~~~-~~~~~~~yd~~~~- 226 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMI---EARKNHGLV-FVKDKIFAVGGQNGLG-GLDNVEYYDIKLN- 226 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTT--EEEEECCCS---SCCBSCEEE-EETTEEEEECCEETTE-EBCCEEEEETTTT-
T ss_pred ECCCCCCCCcccccceEEEeCCCCC--eEEECCCcc---chhhcceEE-EECCEEEEEeCCCCCC-CCceEEEeeCCCC-
Confidence 999977665 899999999999 999998653 345555554 4599999999987664 5789999999988
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCC
Q 001895 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (999)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (999)
+|..+..+ |.+|..|++++++++|||+||.+... ..+++++||+++++|..+..+
T Consensus 227 --~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~------------------ 281 (306)
T 3ii7_A 227 --EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKV------------------ 281 (306)
T ss_dssp --EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEE------------------
T ss_pred --cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCc------------------
Confidence 77777655 78999999999999999999987654 378999999999999999887
Q ss_pred ccCCCCcceeEEEEECC
Q 001895 400 AVELTRRCRHAAAAVGD 416 (999)
Q Consensus 400 ~~~p~~R~~hsa~~~~~ 416 (999)
|.+|.+|+++++.+
T Consensus 282 ---~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 282 ---RAFPVTSCLICVVD 295 (306)
T ss_dssp ---ECCSCTTCEEEEEE
T ss_pred ---ccccceeEEEEECC
Confidence 56899999888744
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=320.00 Aligned_cols=256 Identities=22% Similarity=0.342 Sum_probs=217.2
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
.....|.+|.+|+++.+ +++||||||....... ...++++++||+.+++|+
T Consensus 53 ~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~~~-----------------~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 53 RLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDG-----------------NTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp ECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTE-----------------EEECCCEEEEETTTTEEE
T ss_pred ECCCCCcccccceEEEE------------CCEEEEECCCcCCCCC-----------------CeecceEEEECCCCCeEe
Confidence 33578999999999988 7899999997311000 017789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA 243 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv 243 (999)
++.++ |.+|..|++++++++|||+||.... ...+++++||+.++ +|+.++ ++|.+|++|+++++++ +||+
T Consensus 104 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv 173 (308)
T 1zgk_A 104 PCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERD--EWHLVA---PMLTRRIGVGVAVLNR-LLYA 173 (308)
T ss_dssp ECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEE
T ss_pred ECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCC--eEeECC---CCCccccceEEEEECC-EEEE
Confidence 99875 7899999999999999999998643 35689999999986 599997 8899999999999987 9999
Q ss_pred EccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 244 IGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 244 ~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
+||.++...++++++||+.++ +|+.+.++ |.+|..|.++ +.+++||++||.++.. .+++++.|+..++ +|
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~---~W 243 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVC-VLHNCIYAAGGYDGQD-QLNSVERYDVETE---TW 243 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT---EE
T ss_pred EeCCCCCCcCceEEEEeCCCC--eEeeCCCC---CCccccceEE-EECCEEEEEeCCCCCC-ccceEEEEeCCCC---cE
Confidence 999998888999999999999 99999765 3446656554 4599999999998654 5899999999988 77
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVEL 403 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p 403 (999)
.....+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+ |
T Consensus 244 ~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p 297 (308)
T 1zgk_A 244 TFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM---------------------T 297 (308)
T ss_dssp EECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC---------------------S
T ss_pred EECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCC---------------------C
Confidence 777755 78999999999999999999987643 378999999999999999877 6
Q ss_pred CCcceeEEEEE
Q 001895 404 TRRCRHAAAAV 414 (999)
Q Consensus 404 ~~R~~hsa~~~ 414 (999)
.+|+.|+++++
T Consensus 298 ~~r~~~~~~~l 308 (308)
T 1zgk_A 298 SGRSGVGVAVT 308 (308)
T ss_dssp SCCBSCEEEEC
T ss_pred CCcccceeEeC
Confidence 79999999874
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=342.17 Aligned_cols=242 Identities=19% Similarity=0.209 Sum_probs=190.4
Q ss_pred HhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 001895 687 FSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKV---EY 761 (999)
Q Consensus 687 ~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~---~~ 761 (999)
|++|+++++...+|+|||||||++.+|.++|+..++++....| ....+||||||||||++++||+.+|++|+. ++
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999999999999999999999886543222 122799999999999999999999999996 79
Q ss_pred CCCEEEecCCccccchhhhcC----ChHHHHHHhCCccchhhhhh---hhhhhcccceeEEEcCcEEEecCCccCccc--
Q 001895 762 PNNVHLIRGNHEAADINALFG----FRIECIERMGERDGIWAWHR---INRLFNWLPLAALIEKKIICMHGGIGRSIN-- 832 (999)
Q Consensus 762 P~~v~llrGNHE~~~~~~~~g----f~~e~~~~~g~~~~~~~~~~---~~~~f~~LPlaa~i~~~il~vHgGi~~~~~-- 832 (999)
|.++++||||||.+.++..++ .+..+.+.++.. ...+|.. ..++|..||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 999999999999998864211 222222223221 2346554 445566669999887 79999999999864
Q ss_pred --CHHHhhhccCCccc-----CCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccc
Q 001895 833 --HVEQIENLQRPITM-----EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (999)
Q Consensus 833 --~~~~i~~i~rp~~~-----~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (999)
++++|+.+.|+... ... ..++++||+||.. .| .||.....||++++++||+.+++++|||||++
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~-~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~ 288 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKA-DDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTS 288 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHH-SHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSC
T ss_pred CCCHHHHHHHhhhhcccccccccc-CHHHHhccCCCCC-----CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCc
Confidence 89999998886321 111 2567999999864 24 46662246999999999999999999999999
Q ss_pred cccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCc
Q 001895 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (999)
Q Consensus 906 ~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~ 944 (999)
+++ +...+++++|||||+++|. |.+++|.|+++.
T Consensus 289 ~~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~ 322 (342)
T 2z72_A 289 QER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR 322 (342)
T ss_dssp CSS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred ccc-hhhhcCCCEEEEECCCCCC----CcEEEEEEECCE
Confidence 976 6677899999999999994 667888887763
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=325.78 Aligned_cols=267 Identities=18% Similarity=0.255 Sum_probs=220.3
Q ss_pred CCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEec
Q 001895 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (999)
Q Consensus 87 ~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~ 166 (999)
..|.+|.+|+++.+ +++||||||........ .....+++++||+.+++|+.++
T Consensus 31 ~~p~~r~~~~~~~~------------~~~iyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 31 SSQVPKNHVSLVTK------------ENQVFVAGGLFYNEDNK---------------EDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp CCCSCSSEEEEECT------------TCCEEEEEEEEECSSCS---------------SSCEEEEEEEEETTTTEEEECC
T ss_pred CCCCCccceEEEEE------------CCEEEEEcCcccCCCCC---------------ccccccceEEecCCCCeEEECC
Confidence 44789999999987 78999999963211100 0015678999999999999997
Q ss_pred CCCCCCCCCcCcEEEEeCCEEEEEcccC--CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEE
Q 001895 167 PFGEPPTPRAAHVATAVGTMVVIQGGIG--PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (999)
Q Consensus 167 ~~g~~P~pR~~hsa~~~g~~iyv~GG~~--~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~ 244 (999)
++ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|.+|++|+++++++ +|||+
T Consensus 84 ~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~ 154 (315)
T 4asc_A 84 PL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESD---PLPYVVYGHTVLSHMD-LVYVI 154 (315)
T ss_dssp CB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEEE
T ss_pred CC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECC---CCCCcccceeEEEECC-EEEEE
Confidence 75 89999999999999999999975 34567899999999986 599987 8999999999999998 89999
Q ss_pred ccC-CCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 245 GGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 245 GG~-~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
||. ++...++++|+||+.++ +|+.++++ |.+|..|.++ ..+++||++||.+... .+++++.|++.++ +|
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 224 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF--EWKELAPM---QTARSLFGAT-VHDGRIIVAAGVTDTG-LTSSAEVYSITDN---KW 224 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEE-EETTEEEEEEEECSSS-EEEEEEEEETTTT---EE
T ss_pred eCCCCCCcccceEEEEeCCCC--eEEECCCC---CCchhceEEE-EECCEEEEEeccCCCC-ccceEEEEECCCC---eE
Confidence 999 56677999999999999 99999865 3445555554 5599999999997765 5789999999887 66
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCC----CC-CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GR-MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~----~~-~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (999)
.....+ |.+|..|+++.++++|||+||.+.. +. .....+++++||+++++|+.+.
T Consensus 225 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------------------- 284 (315)
T 4asc_A 225 APFEAF-PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------------------- 284 (315)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE-------------------
T ss_pred EECCCC-CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc-------------------
Confidence 666654 7999999999999999999998542 11 0123688999999999999983
Q ss_pred CccCCCCcceeEEEEECCEEEEEcC
Q 001895 399 AAVELTRRCRHAAAAVGDLIFIYGG 423 (999)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~LyV~GG 423 (999)
+.+|..|++++++++|||+..
T Consensus 285 ----~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 285 ----REIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ----SCSSCCSSCEEEEEEECGGGS
T ss_pred ----cCCcCccceEEeCCEEEEEEe
Confidence 348999999999999999875
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-34 Score=313.75 Aligned_cols=251 Identities=21% Similarity=0.344 Sum_probs=216.4
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCc---E
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK---W 162 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~---W 162 (999)
...|.+|.+|+++.+ +++||+|||..... .++++++||+.+++ |
T Consensus 47 ~~~p~~r~~~~~~~~------------~~~l~v~GG~~~~~---------------------~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 47 PSITRKRRYVASVSL------------HDRIYVIGGYDGRS---------------------RLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CCCSSCCBSCEEEEE------------TTEEEEECCBCSSC---------------------BCCCEEEEETTCCTTCCC
T ss_pred CCCChhhccccEEEE------------CCEEEEEcCCCCCc---------------------cCceEEEEECCCCCCCee
Confidence 467889999999998 78999999986432 78899999999999 9
Q ss_pred EEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEE
Q 001895 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242 (999)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Ly 242 (999)
+.+..+ |.+|..|++++++++||++||.... ...+++++||+.++ +|+.++ ++|.+|..|+++++++ +||
T Consensus 94 ~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iy 163 (301)
T 2vpj_A 94 YSVAPM---NVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNID--QWSMLG---DMQTAREGAGLVVASG-VIY 163 (301)
T ss_dssp EEECCC---SSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTT--EEEEEE---ECSSCCBSCEEEEETT-EEE
T ss_pred EECCCC---CCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCC--eEEECC---CCCCCcccceEEEECC-EEE
Confidence 999765 7899999999999999999998643 34789999999986 599997 7899999999999987 899
Q ss_pred EEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEE
Q 001895 243 AIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWE 322 (999)
Q Consensus 243 v~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~ 322 (999)
++||.++...++++++||+.++ +|+.+.++ |.+|..|.+ +..+++||++||.+... .+++++.|+..++ +
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~---~ 233 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGV-ALLNDHIYVVGGFDGTA-HLSSVEAYNIRTD---S 233 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEECCBCSSS-BCCCEEEEETTTT---E
T ss_pred EECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceE-EEECCEEEEEeCCCCCc-ccceEEEEeCCCC---c
Confidence 9999998888999999999999 99999755 444555554 45599999999998765 4889999999887 6
Q ss_pred EEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccC
Q 001895 323 WAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVE 402 (999)
Q Consensus 323 w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~ 402 (999)
|.....+ |.+|..|++++++++|||+||.+... ..+++++||+++++|..+..+
T Consensus 234 W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~--------------------- 287 (301)
T 2vpj_A 234 WTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSM--------------------- 287 (301)
T ss_dssp EEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEE---------------------
T ss_pred EEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCC---------------------
Confidence 6666654 78999999999999999999987643 268899999999999999887
Q ss_pred CCCcceeEEEEEC
Q 001895 403 LTRRCRHAAAAVG 415 (999)
Q Consensus 403 p~~R~~hsa~~~~ 415 (999)
|.+|+.|+++++.
T Consensus 288 ~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 GTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEESCEEEEEE
T ss_pred CcccccceEEEeC
Confidence 6799999999874
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=321.39 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=208.4
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccC-----CCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIG-----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~-----~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
++++||+.+++|.. ..+ ..|.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS--EWLGMP---PLP 86 (315)
T ss_dssp EEEEEETTTTEEEE-EEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT--EEEECC---CBS
T ss_pred ceEEECCCCCeEec-CCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC--eEEECC---CCC
Confidence 89999999999997 333 2367999999999999999999962 22334567999999986 599987 899
Q ss_pred CCCcccEEEEECCcEEEEEccCC---CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGND---GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~---g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.+++ .+|..|+++ ..+++||++||.+.
T Consensus 87 ~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLP---YVVYGHTVL-SHMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEEE-EETTEEEEECCBCT
T ss_pred cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCC---CcccceeEE-EECCEEEEEeCCCC
Confidence 9999999999988 899999974 4677999999999999 999998653 445555554 56999999999966
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCc
Q 001895 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~ 382 (999)
....+++++.|++.++ +|...+.+ |.+|..|++++++++|||+||.+.... .+++++||+++++|+.+..+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~~~~yd~~~~~W~~~~~~- 230 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAGVTDTGL----TSSAEVYSITDNKWAPFEAF- 230 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEEECSSSE----EEEEEEEETTTTEEEEECCC-
T ss_pred CCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEeccCCCCc----cceEEEEECCCCeEEECCCC-
Confidence 6667899999999988 77777765 789999999999999999999876542 67999999999999999876
Q ss_pred CCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC---------cCcCcEEEeeccc
Q 001895 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG---------VLLDDLLVAEDLA 440 (999)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~---------~~l~Dv~~ld~~~ 440 (999)
|.+|..|++++++++|||+||.++. ..++|+|++|...
T Consensus 231 --------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp --------------------SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred --------------------CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 6799999999999999999997532 4689999999654
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=318.28 Aligned_cols=247 Identities=17% Similarity=0.280 Sum_probs=206.1
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCC-----CCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~-----~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
++++||+.+++|...... .|.+|.+|++++++++||++||.... ....+++++||+.++ +|+.++ ++|
T Consensus 25 ~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 97 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLP---PLP 97 (318)
T ss_dssp EEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECS---CBS
T ss_pred ceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECC---CCC
Confidence 479999999999985322 46899999999999999999996321 123456999999986 599986 899
Q ss_pred CCCcccEEEEECCcEEEEEccCC--CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~--g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~ 303 (999)
.+|+.|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.++ |.+|..|+++ +.+++||++||.+..
T Consensus 98 ~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 98 SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNL---PIKVYGHNVI-SHNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCC---SSCEESCEEE-EETTEEEEECCEESS
T ss_pred ccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCC---CCcccccEEE-EECCEEEEEcCCCCC
Confidence 9999999999987 899999986 4567899999999999 99999765 3445555554 479999999998766
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~ 383 (999)
...+++++.|+..++ +|...+.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 171 ~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-- 240 (318)
T 2woz_A 171 KKCTNRVFIYNPKKG---DWKDLAPM-KTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEF-- 240 (318)
T ss_dssp SCBCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCC--
T ss_pred CCccceEEEEcCCCC---EEEECCCC-CCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCC--
Confidence 667899999999988 66666654 78999999999999999999987643 267899999999999999876
Q ss_pred CCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC---------cCcCcEEEeeccc
Q 001895 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG---------VLLDDLLVAEDLA 440 (999)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~---------~~l~Dv~~ld~~~ 440 (999)
|.+|..|++++++++|||+||.+.. ..++|+|++|...
T Consensus 241 -------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 241 -------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp -------------------SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred -------------------CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 6789999999999999999997642 4689999999754
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=319.42 Aligned_cols=267 Identities=17% Similarity=0.276 Sum_probs=217.5
Q ss_pred CCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEec
Q 001895 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (999)
Q Consensus 87 ~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~ 166 (999)
..|.||.+|+++.+ +++||||||........ .....+++++||+.+++|+.+.
T Consensus 42 ~~~~~r~~~~~~~~------------~~~lyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 42 AEQIPRNHSSIVTQ------------QNQVYVVGGLYVDEENK---------------DQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp CTTSCSSEEEEECS------------SSCEEEEESSCC----------------------CCCBEEEEEETTTTEEEECS
T ss_pred CccCCccceEEEEE------------CCEEEEECCcccCcccc---------------CCCccccEEEEeCCCCcEEECC
Confidence 45689999999887 78999999964321100 0014567999999999999997
Q ss_pred CCCCCCCCCcCcEEEEeCCEEEEEcccCC-CCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEc
Q 001895 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (999)
Q Consensus 167 ~~g~~P~pR~~hsa~~~g~~iyv~GG~~~-~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~G 245 (999)
.+ |.+|..|++++++++|||+||... .....+++++||+.++ +|+.+. ++|.+|++|+++++++ +|||+|
T Consensus 95 ~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 165 (318)
T 2woz_A 95 PL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVK---NLPIKVYGHNVISHNG-MIYCLG 165 (318)
T ss_dssp CB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEEC---CCSSCEESCEEEEETT-EEEEEC
T ss_pred CC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECC---CCCCcccccEEEEECC-EEEEEc
Confidence 65 889999999999999999999863 4556789999999986 599997 8999999999999988 899999
Q ss_pred cCC-CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001895 246 GND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (999)
Q Consensus 246 G~~-g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~ 324 (999)
|.+ +...++++|+||+.++ +|+.++++ |.+|..|.+ ++.+++||++||.+... .+++++.|+..++ +|.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~ 235 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKG--DWKDLAPM---KTPRSMFGV-AIHKGKIVIAGGVTEDG-LSASVEAFDLKTN---KWE 235 (318)
T ss_dssp CEESSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEEEEEETTE-EEEEEEEEETTTC---CEE
T ss_pred CCCCCCCccceEEEEcCCCC--EEEECCCC---CCCcccceE-EEECCEEEEEcCcCCCC-ccceEEEEECCCC---eEE
Confidence 984 4557899999999999 99999765 344555555 45699999999987654 5789999999877 677
Q ss_pred ECCCCCCCCcceeEEEEECCEEEEEcCcCCCCC-----CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCC
Q 001895 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (999)
Q Consensus 325 ~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~-----~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (999)
....+ |.+|..|++++++++|||+||.+.... .....+++|+||+++++|+.+ +
T Consensus 236 ~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~------------------ 294 (318)
T 2woz_A 236 VMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L------------------ 294 (318)
T ss_dssp ECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E------------------
T ss_pred ECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c------------------
Confidence 77654 789999999999999999999865210 012378999999999999998 3
Q ss_pred ccCCCCcceeEEEEECCEEEEEcC
Q 001895 400 AVELTRRCRHAAAAVGDLIFIYGG 423 (999)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyV~GG 423 (999)
+.+|+.|++++++++|||+..
T Consensus 295 ---~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 295 ---KEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ---SCCGGGTTCEEEEEEEEGGGC
T ss_pred ---ccccccccceeeCCEEEEEEe
Confidence 458999999999999999853
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=348.22 Aligned_cols=293 Identities=14% Similarity=0.169 Sum_probs=234.6
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEe
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l 165 (999)
...|..|++|+++ + +++||||||... . .++++|+||+.+++|+.+
T Consensus 383 ~~~p~rr~g~~~~-~------------~~~iyv~GG~~~-~---------------------~~~~v~~yd~~~~~W~~~ 427 (695)
T 2zwa_A 383 ECPINRKFGDVDV-A------------GNDVFYMGGSNP-Y---------------------RVNEILQLSIHYDKIDMK 427 (695)
T ss_dssp CCTTCCBSCEEEE-C------------SSCEEEECCBSS-S---------------------BCCCEEEEEECSSCEEEE
T ss_pred CCCCCCceeEEEE-E------------CCEEEEECCCCC-C---------------------CcCcEEEEECCCCeEEEe
Confidence 4677788888766 5 688999999865 2 778999999999999999
Q ss_pred c-C--CCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE
Q 001895 166 T-P--FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (999)
Q Consensus 166 ~-~--~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~ 240 (999)
. + .+..|.+|.+|+++++ +++|||+||.+......+++|+||+.++ +|+.+. ++|.+|++|+++++.+++
T Consensus 428 ~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~~---~~p~~R~~h~~~~~~~~~ 502 (695)
T 2zwa_A 428 NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMIK---SLSHTRFRHSACSLPDGN 502 (695)
T ss_dssp ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT--EEEECC---CCSBCCBSCEEEECTTSC
T ss_pred ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC--cEEECC---CCCCCcccceEEEEcCCE
Confidence 8 5 2456899999999999 9999999999776667899999999996 599996 899999999999973348
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-C-CEEEEEeccCCCC-CCcccEEEEecCC
Q 001895 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D-GLLLLCGGRDASS-VPLASAYGLAKHR 317 (999)
Q Consensus 241 Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~-~~LyvfGG~~~~~-~~~~d~~~~~~~~ 317 (999)
|||+||.++.. ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||+|||..... ..++++|.|+..+
T Consensus 503 iyv~GG~~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 503 VLILGGVTEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp EEEECCBCSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred EEEECCCCCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 99999998765 9999999999 999999877677788888766654 2 8999999986554 5689999999987
Q ss_pred CCeE----EEEECCCCCCCCcceeEEEEEC-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCccc
Q 001895 318 DGRW----EWAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSA 392 (999)
Q Consensus 318 ~~~W----~w~~~~g~~P~~R~~hsav~~~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~ 392 (999)
+ +| +|.....+++.+|+.|++++++ ++|||+||.+.... ....+++++||+.+++|+.+...... +
T Consensus 578 ~-~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~-----~-- 648 (695)
T 2zwa_A 578 E-NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRI-----W-- 648 (695)
T ss_dssp T-CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHH-----H--
T ss_pred C-ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeeccccc-----c--
Confidence 7 43 4666655546899999999999 99999999875432 13478999999999999964322000 0
Q ss_pred ccCCCCCccCCCCcceeEEEEECC-EEEEEcC----CCCCcCcCcEEEeecc
Q 001895 393 DAAGGDAAVELTRRCRHAAAAVGD-LIFIYGG----LRGGVLLDDLLVAEDL 439 (999)
Q Consensus 393 ~~~~~~~~~~p~~R~~hsa~~~~~-~LyV~GG----~~~~~~l~Dv~~ld~~ 439 (999)
...+..+.+|+++.+++ +|||+|| ++-+.+++++|.+|+.
T Consensus 649 -------~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 649 -------EDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp -------HHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred -------CCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEE
Confidence 00112677899998877 9999999 3446778899999864
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=286.33 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=190.9
Q ss_pred CCCC-CCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 86 EDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 86 ~~~P-~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
...| .+|.+|+++.+ +++||||||... ..+. ...++++|+||+.+++|+
T Consensus 49 ~~~p~~~R~~~~~~~~------------~~~lyv~GG~~~~~~~~-----------------~~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 49 AAFPGGPRDQATSAFI------------DGNLYVFGGIGKNSEGL-----------------TQVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp CCCTTCCCBSCEEEEE------------TTEEEEECCEEECTTSC-----------------EEECCCEEEEETTTTEEE
T ss_pred CCCCCCcCccceEEEE------------CCEEEEEcCCCCCCCcc-----------------ceeeccEEEEeCCCCcEE
Confidence 4577 79999999999 789999999822 1100 017899999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCC---------------------------------CCcCcEEEEecCC
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG---------------------------------LSAEDLHVLDLTQ 210 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~---------------------------------~~~~dv~vyD~~t 210 (999)
++.++. |.+|.+|++++++++|||+||..... ...+++++||+.+
T Consensus 100 ~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 177 (357)
T 2uvk_A 100 KLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST 177 (357)
T ss_dssp ECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT
T ss_pred ECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC
Confidence 999874 79999999999999999999975321 2458999999998
Q ss_pred CCCceEEEeecCCCCCCCc-ccEEEEECCcEEEEEccCCCC-CCCCeEEEEEC--CCCCceEEEcccCCCCCCCccceEE
Q 001895 211 QRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGK-RPLADVWALDT--AAKPYEWRKLEPEGEGPPPCMYATA 286 (999)
Q Consensus 211 ~t~kW~~v~~~g~~P~~R~-~h~~~v~~~~~Lyv~GG~~g~-~~~ndv~~yDl--~s~~~~W~~v~~~~~~P~~r~~~~a 286 (999)
+ +|+.+. ++|.+|. +|+++++++ +||||||.++. ...+++|+||+ .++ +|+.+..+.. |.. +..++
T Consensus 178 ~--~W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~-~~~-~~~~~ 247 (357)
T 2uvk_A 178 Q--QWSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSS-PDG-VAGGF 247 (357)
T ss_dssp T--EEEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCSST-TTC-CBSCE
T ss_pred C--cEEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCC-Ccc-cccce
Confidence 6 599997 7787655 599999987 89999998653 35789999987 777 9999987732 222 33445
Q ss_pred EEEeCCEEEEEeccCCC----------------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEc
Q 001895 287 SARSDGLLLLCGGRDAS----------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350 (999)
Q Consensus 287 ~~~~~~~LyvfGG~~~~----------------~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~G 350 (999)
++..+++||||||.+.. ...+.+++.|+..++ +|..+.. .|.+|..|+++.++++|||+|
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGE-LSQGRAYGVSLPWNNSLLIIG 323 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEE-CSSCCBSSEEEEETTEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCC-CCCCcccceeEEeCCEEEEEe
Confidence 56669999999997432 123578899998876 4555544 478999999999999999999
Q ss_pred CcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 351 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 351 G~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
|.+..+. .++++++|++++++|.+....
T Consensus 324 G~~~~~~---~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 324 GETAGGK---AVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EECGGGC---EEEEEEEEEC-CCSCEEEC--
T ss_pred eeCCCCC---EeeeEEEEEEcCcEeEeeecc
Confidence 9876543 268999999999999998776
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-31 Score=287.27 Aligned_cols=200 Identities=21% Similarity=0.340 Sum_probs=161.5
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
+|+||||||||+.+|.++|+.+++++..+ .+||||||||||++++||+.+|++| |..+++||||||.+.++
T Consensus 2 ~i~vigDiHG~~~~l~~ll~~~~~~~~~d-----~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~ 72 (280)
T 2dfj_A 2 ATYLIGDVHGCYDELIALLHKVEFTPGKD-----TLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLA 72 (280)
T ss_dssp CEEEECCCCSCHHHHHHHHHHTTCCTTTC-----EEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCC-----EEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHh
Confidence 68999999999999999999999843221 7999999999999999999999997 35899999999999999
Q ss_pred hhcCChHHHHHHhCCc--cchhhhhhhhhhhcccceeEEEcC-cEEEecCCccCcccCHHHhhhccCCccc---CCCCce
Q 001895 779 ALFGFRIECIERMGER--DGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITM---EAGSIV 852 (999)
Q Consensus 779 ~~~gf~~e~~~~~g~~--~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~---~~~~~~ 852 (999)
..+||..+.. +..-. .....+..+.++|+.||+++.+++ +++||||||+|.+ ++++++.+.|+++. ......
T Consensus 73 ~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~ 150 (280)
T 2dfj_A 73 VFAGISRNKP-KDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPF 150 (280)
T ss_dssp HHTTSSCCCG-GGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHH
T ss_pred HhcCCcccch-hhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHH
Confidence 9998864211 00000 001134556778888899988887 9999999999997 79999888887652 112235
Q ss_pred eeecccCCCCCCCCCCCCccCCCCCCceeeCHHH--HHHHHHHcC-CcEEEEec-cccccceEEec
Q 001895 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR--VMEFCNNND-LQLIVRAH-ECVMDGFERFA 914 (999)
Q Consensus 853 ~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~--~~~fl~~~~-l~~iiR~H-~~~~~G~~~~~ 914 (999)
++|+||+||. ..|.++.||.+.+.||.++ ..+||+.+| +++++|+| |.+++||+.++
T Consensus 151 ~~~~l~~d~~-----~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 151 FLDAMYGDMP-----NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp HHHHTTCSCC-----CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred HHHHhcCCCC-----CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 7899999996 3699999999877899998 577999999 99999999 88999998765
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=288.45 Aligned_cols=275 Identities=15% Similarity=0.100 Sum_probs=203.2
Q ss_pred CCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecC
Q 001895 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (999)
Q Consensus 88 ~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~ 167 (999)
.|.||.+|+++++.. +++||+|||....... + .....+++++||+.+++|+.+..
T Consensus 182 ~~~P~~~~~~av~~~----------~g~l~v~GG~~~~~~~----------~-----~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 182 IDLPIVPAAAAIEPT----------SGRVLMWSSYRNDAFG----------G-----SPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp EECSSCCSEEEEETT----------TTEEEEEEECCCTTTC----------S-----CCCSEEEEEEECTTTCCBCCCEE
T ss_pred ccCCCCceeEEEEec----------CCEEEEEecccccccc----------c-----CCCCeEEEEEEeCCCCcEEeCcc
Confidence 356788888887732 5899999998653210 0 00134589999999999999877
Q ss_pred CCCCCCCCcCcE--EEE-eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEE
Q 001895 168 FGEPPTPRAAHV--ATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (999)
Q Consensus 168 ~g~~P~pR~~hs--a~~-~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~ 244 (999)
+ |.+|..|+ +++ .+++||++||... .++++||+.++ +|+.++ ++|.+|+.|+++++.+++|||+
T Consensus 237 ~---~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~--~W~~~~---~~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 237 T---VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSD--SWIPGP---DMQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp E---ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGT--EEEECC---CCSSCCSSCEEEECTTSCEEEE
T ss_pred c---CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCC--ceeECC---CCCccccccceEEecCCeEEEE
Confidence 6 55665553 444 4789999999753 37999999986 599987 8999999999999933489999
Q ss_pred cc-CCCCCCCCeEEEEECCCCCceEEEccc-----CCCC-----------------------------------------
Q 001895 245 GG-NDGKRPLADVWALDTAAKPYEWRKLEP-----EGEG----------------------------------------- 277 (999)
Q Consensus 245 GG-~~g~~~~ndv~~yDl~s~~~~W~~v~~-----~~~~----------------------------------------- 277 (999)
|| .++...++++++||+.++ +|+.+.. +...
T Consensus 304 GG~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred eCcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 99 567778999999999999 9999732 1110
Q ss_pred -------------CCCccceEEEE--EeCCEEEEEeccCCC--CCCcc---cEEEEecCCCCeEEEEECCCCCCCCccee
Q 001895 278 -------------PPPCMYATASA--RSDGLLLLCGGRDAS--SVPLA---SAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337 (999)
Q Consensus 278 -------------P~~r~~~~a~~--~~~~~LyvfGG~~~~--~~~~~---d~~~~~~~~~~~W~w~~~~g~~P~~R~~h 337 (999)
++++..++++. ..+++||+|||.+.. ...++ .++.|++.++ +|..... +.+|.+|..|
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~-~~mp~~R~~~ 459 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFAS-NGLYFARTFH 459 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEECT-TCCSSCCBSC
T ss_pred eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEcc-CCCCCCcccC
Confidence 11123444444 258999999997531 12334 5677777665 4544331 3458999999
Q ss_pred EEEEE-CCEEEEEcCcCCCCC--CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE
Q 001895 338 AAVFV-NARLHVSGGALGGGR--MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (999)
Q Consensus 338 sav~~-~~~L~V~GG~~~~~~--~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (999)
+++++ +++|||+||.+.... .....+++++||+++++|+.+..+ +.+|.+|+++++
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~---------------------~~~R~~hs~a~l 518 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLL 518 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEE
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC---------------------CCccccccHhhc
Confidence 99888 999999999763210 113378899999999999998876 679999999888
Q ss_pred --CCEEEEEcCCC
Q 001895 415 --GDLIFIYGGLR 425 (999)
Q Consensus 415 --~~~LyV~GG~~ 425 (999)
+++|||+||..
T Consensus 519 l~dg~v~v~GG~~ 531 (656)
T 1k3i_A 519 LPDGRVFNGGGGL 531 (656)
T ss_dssp CTTSCEEEEECCC
T ss_pred CCCcEEEecCCCC
Confidence 99999999953
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=286.32 Aligned_cols=230 Identities=17% Similarity=0.235 Sum_probs=189.6
Q ss_pred CCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe-e--cCCCCCCCcccEEEEE--CCcEEEEEc
Q 001895 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV-V--QGPGPGPRYGHVMALV--GQRYLMAIG 245 (999)
Q Consensus 171 ~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~-~--~g~~P~~R~~h~~~v~--~~~~Lyv~G 245 (999)
.|.+|++|++ +++++|||+||.+. ...+++|+||+.++ +|+.++ . .+.+|.+|++|+++++ ++ +|||+|
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~~~~--~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~G 458 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSIHYD--KIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIG 458 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEECSS--CEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEEC
T ss_pred CCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEECCCC--eEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEc
Confidence 4666666554 48999999999866 66799999999986 499998 3 3679999999999999 66 899999
Q ss_pred cCCCCC-CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001895 246 GNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (999)
Q Consensus 246 G~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~ 324 (999)
|.++.. .++++|+||+.++ +|+.+.++ |.+|..|+++++.+++||||||.+... +++.|++.++ +|.
T Consensus 459 G~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~---~W~ 526 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE---IFK 526 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT---EEE
T ss_pred CCCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC---ceE
Confidence 998755 7999999999999 99999765 445777777766699999999997665 8999999887 555
Q ss_pred ECC--CCCCCCcceeEEEEEC---CEEEEEcCcCCCCCCcccCCeEEEEECCCCe------EEEcccCcCCCCCCCcccc
Q 001895 325 IAP--GVSPSPRYQHAAVFVN---ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV------WCDTKSVVTSPRTGRYSAD 393 (999)
Q Consensus 325 ~~~--g~~P~~R~~hsav~~~---~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~------W~~v~~~~~~p~~~~~~~~ 393 (999)
... +..|.+|+.|++++++ ++|||+||....+. ...+++|+||+.+++ |+.+..++
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p----------- 593 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP----------- 593 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG-----------
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC-----------
Confidence 555 3468899999988877 89999999865442 237899999999999 88887641
Q ss_pred cCCCCCccCCCCcceeEEEEEC-CEEEEEcCCCCC---cCcCcEEEeeccc
Q 001895 394 AAGGDAAVELTRRCRHAAAAVG-DLIFIYGGLRGG---VLLDDLLVAEDLA 440 (999)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~~~~-~~LyV~GG~~~~---~~l~Dv~~ld~~~ 440 (999)
+.+|++|++++++ ++|||+||.++. ..+++++++|...
T Consensus 594 ---------~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 594 ---------LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ---------GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ---------CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 3689999999999 999999998755 3689999999764
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-23 Score=227.23 Aligned_cols=187 Identities=19% Similarity=0.307 Sum_probs=128.2
Q ss_pred HHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 001895 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (999)
Q Consensus 685 ~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~ 763 (999)
.+|.++++++++..+|+|||||||++.+|.++|+.++.... + .+||+|||||||++++|++.+|.++
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 46788999999999999999999999999999999987653 3 7999999999999999999999875
Q ss_pred CEEEecCCccccchhhhcCChHH-HHHHhCCccc-----hhhhhhhhhhhcccceeEEEc-CcEEEecCCccCccc----
Q 001895 764 NVHLIRGNHEAADINALFGFRIE-CIERMGERDG-----IWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSIN---- 832 (999)
Q Consensus 764 ~v~llrGNHE~~~~~~~~gf~~e-~~~~~g~~~~-----~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~~~---- 832 (999)
.+++|+||||.+.++..+++..+ +..+++.... ..+.....++|+.||+++.++ ++++|||||+.|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999999888887654 3444443211 223456678889999998886 599999999988653
Q ss_pred CHHHhhhcc---CCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 833 HVEQIENLQ---RPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 833 ~~~~i~~i~---rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
..+++..+. ++...+..+ ..++|+||... ....|..+.||...++||+..+
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~-~~~~w~~~~~g~~~vvfGHt~~ 207 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETND-GGKPWASMWRGPETVVFGHDAR 207 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTT-CCEEGGGGCCCSSEEEECCCGG
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCc-CCCChhhccCCCCEEEECCCcc
Confidence 233333332 221111112 14789999542 3455666666655445555443
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.6e-22 Score=242.10 Aligned_cols=247 Identities=13% Similarity=0.109 Sum_probs=179.5
Q ss_pred EEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCC-----CCcCcEEEEecCCCCCceEEEeecCCC
Q 001895 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (999)
Q Consensus 152 v~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~-----~~~~dv~vyD~~t~t~kW~~v~~~g~~ 224 (999)
+..||+.+++|..+.++ ||..|+++++ +++||++||..... ....++++||+.++ +|+.+. .+
T Consensus 168 ~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~--~w~~~~---~~ 237 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG--IVSDRT---VT 237 (656)
T ss_dssp CCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC--CBCCCE---EE
T ss_pred cccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC--cEEeCc---cc
Confidence 45578889999998654 5567777777 88999999975432 12357999999996 499887 56
Q ss_pred CCCCcccE--EEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 225 PGPRYGHV--MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 225 P~~R~~h~--~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
|.+|..|+ ++++.+++||++||.++. ++++||+.++ +|+.+.++. .+|.+|+++++.+++||++||...
T Consensus 238 ~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~--~W~~~~~~~---~~R~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 238 VTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD--SWIPGPDMQ---VARGYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp ECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT--EEEECCCCS---SCCSSCEEEECTTSCEEEECCCCC
T ss_pred CCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC--ceeECCCCC---ccccccceEEecCCeEEEEeCccc
Confidence 67776554 555555589999998653 7999999999 999997654 446666666666999999999644
Q ss_pred CCCCcccEEEEecCCCCeEEEEEC---CCCC-------------------------------------------------
Q 001895 303 SSVPLASAYGLAKHRDGRWEWAIA---PGVS------------------------------------------------- 330 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~~~W~w~~~---~g~~------------------------------------------------- 330 (999)
....+++++.|++.++ +|+.... .++.
T Consensus 309 ~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~ 387 (656)
T 1k3i_A 309 GGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGK 387 (656)
T ss_dssp SSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEE
T ss_pred CCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCc
Confidence 4446889999999876 5544311 1110
Q ss_pred -------CCCcceeEEEE---ECCEEEEEcCcCCCCCCcccCC---eEEEEECCCCeEEEcc--cCcCCCCCCCcccccC
Q 001895 331 -------PSPRYQHAAVF---VNARLHVSGGALGGGRMVEDSS---SVAVLDTAAGVWCDTK--SVVTSPRTGRYSADAA 395 (999)
Q Consensus 331 -------P~~R~~hsav~---~~~~L~V~GG~~~~~~~~~~~~---~v~vyD~~t~~W~~v~--~~~~~p~~~~~~~~~~ 395 (999)
+.++..+++++ ++++|||+||...... ...++ .+++||+.+++|..+. .+
T Consensus 388 ~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~-~~~~~~~~~v~~yd~~~~~W~~~~~~~m-------------- 452 (656)
T 1k3i_A 388 RQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD-SDATTNAHIITLGEPGTSPNTVFASNGL-------------- 452 (656)
T ss_dssp CEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS-SBCCCCEEEEECCSTTSCCEEEECTTCC--------------
T ss_pred cccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC-CCcCCcceEEEcCCCCCCCeeEEccCCC--------------
Confidence 01123345554 4899999999753211 11234 7999999999999986 44
Q ss_pred CCCCccCCCCcceeEEEEE-CCEEEEEcCCCC------CcCcCcEEEeeccc
Q 001895 396 GGDAAVELTRRCRHAAAAV-GDLIFIYGGLRG------GVLLDDLLVAEDLA 440 (999)
Q Consensus 396 ~~~~~~~p~~R~~hsa~~~-~~~LyV~GG~~~------~~~l~Dv~~ld~~~ 440 (999)
|.+|..|+++++ +++|||+||.+. ...+++++++|...
T Consensus 453 -------p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 453 -------YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp -------SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred -------CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 679999999998 999999999653 35678899998643
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-20 Score=195.58 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=93.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|+|||||||++.+|.++|+.++..+..+ .+||+|||||||+++.|++.+|.. ..+++|+||||.+.+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 579999999999999999999998753221 789999999999999999988754 379999999999887
Q ss_pred hhhcCChHH-HHHHhCCc-------cchhhhhhhhhhhcccceeEEE---cCcEEEecCCccCc
Q 001895 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (999)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~~ 830 (999)
+..+++... .+...+.. ....+++.+.++|+.||+++++ +.+++|||||+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 755433211 12222211 1123557888999999999877 56899999999764
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=5.5e-13 Score=143.37 Aligned_cols=189 Identities=19% Similarity=0.157 Sum_probs=126.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|.+||||||++.+|.++++.+. ..+ .+|++||++|+|+++.|++.+|..++ .+++++||||....
T Consensus 4 mri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~ 70 (246)
T 3rqz_A 4 MRILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACI 70 (246)
T ss_dssp CCEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHT
T ss_pred cEEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHh
Confidence 579999999999999999999987 222 79999999999999999999999884 37999999999876
Q ss_pred hhhcC--Ch---HHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCce
Q 001895 778 NALFG--FR---IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIV 852 (999)
Q Consensus 778 ~~~~g--f~---~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~ 852 (999)
..... +. .+... + ....+.....+++..||.....+ +++|+||++....
T Consensus 71 ~~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~--------------------- 124 (246)
T 3rqz_A 71 GRLSLDEFNPVARFASY-W---TTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI--------------------- 124 (246)
T ss_dssp CCCCCC--CGGGGCHHH-H---HHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT---------------------
T ss_pred ccCCccccCHHHHHHHH-H---HHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc---------------------
Confidence 54322 10 00000 0 01123355667888999886654 8999999864210
Q ss_pred eeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEE--------------------
Q 001895 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-------------------- 912 (999)
Q Consensus 853 ~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~-------------------- 912 (999)
| . +.+....+.+.++..+.+++|-||.=.+.-+..
T Consensus 125 -----~----~----------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l 179 (246)
T 3rqz_A 125 -----W----E----------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV 179 (246)
T ss_dssp -----T----C----------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC
T ss_pred -----c----c----------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec
Confidence 0 0 122345667778888999999999876543331
Q ss_pred ecCCeEEEEecccccCCCCCCeEEEEEEcCC-ceEEeEEe
Q 001895 913 FAQGHLITLFSATNYCGTANNAGAILVLGRD-LVVVPKLI 951 (999)
Q Consensus 913 ~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~-~~~~~~~~ 951 (999)
..+..+|..=|.-.-- .....+++++++.+ ..++++.+
T Consensus 180 ~~g~~ivNpGSVG~Pr-dg~p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 180 SSGRYIINPGAVGQPR-DGDPRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp SSSCEEEEECCSSCCC-SSCCSEEEEEEEGGGTEEEEEEE
T ss_pred CCCeEEEECCccCCCC-CcCCcceEEEEECCCCEEEEEEe
Confidence 1134455555442211 23456888888754 34555444
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.5e-12 Score=135.72 Aligned_cols=199 Identities=12% Similarity=0.048 Sum_probs=121.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhC---CC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYG---SP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g---~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (999)
.+|++||||||++..|.++++.+. .. ..+ .+|++||++|+|+++.|++.+|..|+... .+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecch
Confidence 468999999999999999998775 32 112 68999999999999999999999987543 499999999
Q ss_pred cccchhhhcCCh-----------HHHHHHhCCccchhhhhhhhhhhcccceeEEE--cC-cEEEecCCccCcccCHHHhh
Q 001895 773 EAADINALFGFR-----------IECIERMGERDGIWAWHRINRLFNWLPLAALI--EK-KIICMHGGIGRSINHVEQIE 838 (999)
Q Consensus 773 E~~~~~~~~gf~-----------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~~-~il~vHgGi~~~~~~~~~i~ 838 (999)
|.........+. ......+ ......+-....++++.||....+ ++ +|+++||++....
T Consensus 74 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~------- 145 (252)
T 1nnw_A 74 DQIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF------- 145 (252)
T ss_dssp HHHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT-------
T ss_pred HHHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc-------
Confidence 987654321110 0000000 000112234455778889987654 33 8999999862110
Q ss_pred hccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHc-CCcEEEEeccccccceEEecCCe
Q 001895 839 NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNN-DLQLIVRAHECVMDGFERFAQGH 917 (999)
Q Consensus 839 ~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~~~~~ 917 (999)
. +.+|. .-+.+.+.++++.. +.+++|-||.-....... ++.
T Consensus 146 ----------~-----~~~~~---------------------~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~ 187 (252)
T 1nnw_A 146 ----------D-----GEVLA---------------------EQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYG 187 (252)
T ss_dssp ----------T-----CCCCS---------------------SCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTE
T ss_pred ----------c-----cccCC---------------------CCCHHHHHHHHhcCCCCCEEEECCccccceEec--CCe
Confidence 0 00010 01235677788887 999999999887654432 443
Q ss_pred E-EEEecccccCCCCCCeEEEEEEcCC-ceEEeEEe
Q 001895 918 L-ITLFSATNYCGTANNAGAILVLGRD-LVVVPKLI 951 (999)
Q Consensus 918 ~-iTvFSa~~y~~~~~n~ga~l~~~~~-~~~~~~~~ 951 (999)
+ |..=| ..+.-.....+++++++-+ ..+.++.+
T Consensus 188 ~~in~Gs-~~~~~~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 188 RVVCPGS-VGFPPGKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp EEEEECC-SSSCSSSSCCEEEEEEETTTCCEEEEEE
T ss_pred EEEECCC-ccCCCCCCCcceEEEEECCCCeEEEEEe
Confidence 3 22211 1111111225677777543 55555444
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=4.4e-12 Score=138.23 Aligned_cols=118 Identities=16% Similarity=0.086 Sum_probs=86.8
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
+|.||+||||++..|.++|+.+.....+ .+||+||+|++|+++.||+.+|.+++ .+++++||||...++
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 81 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWH 81 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHH
Confidence 5899999999999999999988644333 79999999999999999999998873 589999999998776
Q ss_pred hhc---CChHHHHHHhC---CccchhhhhhhhhhhcccceeEEE--c-CcEEEecCCc
Q 001895 779 ALF---GFRIECIERMG---ERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGI 827 (999)
Q Consensus 779 ~~~---gf~~e~~~~~g---~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi 827 (999)
... +|.......+. ......+.....+++..||....+ + .+|+++||-.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 82 GVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp HHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred hhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 433 33322111110 001123445677889999998755 3 3899999654
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.66 E-value=3.5e-08 Score=103.07 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCCEEEec
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ--------HSLETITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~--------~s~evl~ll~~lk~~~P~~v~llr 769 (999)
.++.+++|+||++..|.++++.+.....+ .+|++||++|+|+ ...+++.+|.+++ ..+++++
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~ 95 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVR 95 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEE
Confidence 57999999999999999999876422222 7899999999998 4689999988875 3699999
Q ss_pred CCccccc
Q 001895 770 GNHEAAD 776 (999)
Q Consensus 770 GNHE~~~ 776 (999)
||||...
T Consensus 96 GNHD~~~ 102 (208)
T 1su1_A 96 GNCDSEV 102 (208)
T ss_dssp CTTCCHH
T ss_pred CCCchHH
Confidence 9999854
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.60 E-value=7.4e-07 Score=91.58 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.++.+++|+||++..|.++++.+.....+ .+|++||++|. +++..|.++ ...+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 47999999999999999999887432222 68899999984 666666543 2469999999998654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=8.3e-07 Score=92.90 Aligned_cols=73 Identities=11% Similarity=0.127 Sum_probs=54.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|.+++|+|+.+..|.++++.+.....+ -+|++||++|+|....++..++-.|+.. +..+++++||||....
T Consensus 6 mri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~~ 78 (228)
T 1uf3_A 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPIW 78 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSHH
T ss_pred EEEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchhH
Confidence 57999999999999998888765321122 6889999999997666555555555433 3459999999998643
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.9e-07 Score=93.60 Aligned_cols=62 Identities=23% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCeEEEecCCC--CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHG--QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG--~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+|.+++|+|| +...|.++++.+. ...+ .+|++||++|+ |++.+|..+. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 36899999997 7778888887753 2222 68999999984 8888888763 3699999999975
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.30 E-value=4.1e-06 Score=84.73 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=43.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.++.+++|+||++..|.++++.+.. ..+ .++++||+.- +++. .++ ..+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 4689999999999999999998853 222 6889999731 2222 222 2699999999975
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.27 E-value=2.4e-05 Score=81.78 Aligned_cols=120 Identities=22% Similarity=0.342 Sum_probs=79.1
Q ss_pred cCCeEEEecCCCCHH------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecC
Q 001895 697 KAPIKIFGDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrG 770 (999)
..++.+++|+|+++. .|.++++. ...+ .+|++||++| .|++.+|..+. ..+++++|
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~---~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~G 86 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT---DKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSG 86 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC---TTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc---CCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecC
Confidence 357999999999863 33334331 1122 6889999998 58888887763 36999999
Q ss_pred CccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEE--c-CcEEEecCCccCcccCHHHhhhccCCcccC
Q 001895 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITME 847 (999)
Q Consensus 771 NHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (999)
|||....... .+++..||....+ + .+|+++||.... |
T Consensus 87 NHD~~~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~-------------~---- 126 (215)
T 2a22_A 87 DLDSAIFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVL-------------P---- 126 (215)
T ss_dssp TTCCSCCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTSS-------------S----
T ss_pred CCcCcccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCccC-------------C----
Confidence 9998654310 0123456654333 2 379999986411 0
Q ss_pred CCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccc
Q 001895 848 AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (999)
Q Consensus 848 ~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (999)
| .+.+.+.++++..+.++++-||.-..
T Consensus 127 ----------~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 127 ----------W-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp ----------T-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred ----------C-----------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 0 13456777888889999999997654
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=97.95 E-value=5.8e-05 Score=83.55 Aligned_cols=71 Identities=18% Similarity=0.280 Sum_probs=47.0
Q ss_pred CCeEEEecCCC------------CHHHHHHHHHHhCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhcC
Q 001895 698 APIKIFGDLHG------------QFGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVEY 761 (999)
Q Consensus 698 ~~i~vvGDiHG------------~~~~L~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~~ 761 (999)
.+|++++|+|. ....|.++++.+.. ...+ -+|++||++|.|... .+ +..+|-.|....
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 46999999996 26677777776642 2222 588899999998742 22 233333332222
Q ss_pred CCCEEEecCCccc
Q 001895 762 PNNVHLIRGNHEA 774 (999)
Q Consensus 762 P~~v~llrGNHE~ 774 (999)
.-.+++++||||.
T Consensus 100 ~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 100 GAELVWVMGNHDD 112 (330)
T ss_dssp TCEEEECCCTTSC
T ss_pred CCCEEEeCCCCCC
Confidence 3459999999997
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=97.95 E-value=1.1e-05 Score=82.82 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=48.3
Q ss_pred CCeEEEecCCCCHHHH-------------HHHHHHhCC--CCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC
Q 001895 698 APIKIFGDLHGQFGDL-------------MRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L-------------~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P 762 (999)
.++.+++|+|+....+ .++++.+.. ...+ .+|++||++++|+...+++.+|..+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~---- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP---- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----
Confidence 4689999999644332 223333221 1222 68899999999987778888887763
Q ss_pred CCEEEecCCccccc
Q 001895 763 NNVHLIRGNHEAAD 776 (999)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (999)
..+++++||||...
T Consensus 72 ~~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 72 GRKILVMGNHDKDK 85 (195)
T ss_dssp SEEEEECCTTCCCH
T ss_pred CCEEEEeCCCCCch
Confidence 35999999999854
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=97.93 E-value=1.3e-05 Score=82.23 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=43.9
Q ss_pred CCeEEEecCCCCHH--HHHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 698 APIKIFGDLHGQFG--DLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 698 ~~i~vvGDiHG~~~--~L~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.++.+++|+|++.. ++.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~ 75 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 75 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCc
Confidence 56899999999753 23333332 2211122 6888999997 68888877663 369999999997
Q ss_pred cc
Q 001895 775 AD 776 (999)
Q Consensus 775 ~~ 776 (999)
..
T Consensus 76 ~~ 77 (192)
T 1z2w_A 76 NL 77 (192)
T ss_dssp CT
T ss_pred cc
Confidence 54
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=97.88 E-value=6.6e-06 Score=88.14 Aligned_cols=73 Identities=8% Similarity=0.096 Sum_probs=52.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--------------------------HHHH
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------------------------LETI 751 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------------------------~evl 751 (999)
.+|.+++|||+++..|.++++.+.....+ -+|++||++|+|..+ .+..
T Consensus 6 mri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 6 RKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHH
Confidence 57999999999999998888876322222 688999999999652 1233
Q ss_pred HHHHHhhhcCCCCEEEecCCccccch
Q 001895 752 TLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|-.|+. .+..+++++||||....
T Consensus 80 ~~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 80 KFFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHHh-cCCcEEEEcCCCCchhh
Confidence 44444443 23469999999998643
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0051 Score=67.04 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=43.1
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+|++|+|+||+...| ..+..+ -+|++||++|+|... .+++.+|..+. + ..++++.||||..
T Consensus 60 mri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 60 TRFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELT 123 (296)
T ss_dssp EEEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGG
T ss_pred eEEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCcccc
Confidence 4699999999998653 223332 688899999999742 23344444432 1 2489999999985
Q ss_pred c
Q 001895 776 D 776 (999)
Q Consensus 776 ~ 776 (999)
.
T Consensus 124 ~ 124 (296)
T 3rl5_A 124 F 124 (296)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0005 Score=73.72 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=46.3
Q ss_pred CeEEEecCCCCH------------HHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcCC
Q 001895 699 PIKIFGDLHGQF------------GDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEYP 762 (999)
Q Consensus 699 ~i~vvGDiHG~~------------~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~P 762 (999)
+|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|.... ++..+|..| +
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l----~ 71 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL----N 71 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----S
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----C
Confidence 589999999985 6788888776432 122 6889999999987421 222333222 3
Q ss_pred CCEEEecCCcccc
Q 001895 763 NNVHLIRGNHEAA 775 (999)
Q Consensus 763 ~~v~llrGNHE~~ 775 (999)
-.++.++||||..
T Consensus 72 ~p~~~v~GNHD~~ 84 (274)
T 3d03_A 72 YPLYLIPGNHDDK 84 (274)
T ss_dssp SCEEEECCTTSCH
T ss_pred CCEEEECCCCCCH
Confidence 3599999999984
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.096 Score=55.30 Aligned_cols=185 Identities=17% Similarity=0.098 Sum_probs=116.8
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||+-.|..+. +.+..+|+.+++-..-... |..-.+.+.+..+++||+...
T Consensus 30 ~~~LyestG~~g~------------------------S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 30 RGHLYESTGETGR------------------------SSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TTEEEEEECCTTS------------------------CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe
Confidence 6799999997543 3788999999986655443 344566778888999999865
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
. .+.+++||..+. ..+. ..+.+..+.+++.-++ +||+.=| .+.++.+|+.+.. .-..+.
T Consensus 83 ~------~~~v~v~D~~tl----~~~~---ti~~~~~Gwglt~dg~-~L~vSdg------s~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 83 R------NHEGFVYDLATL----TPRA---RFRYPGEGWALTSDDS-HLYMSDG------TAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp S------SSEEEEEETTTT----EEEE---EEECSSCCCEEEECSS-CEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred e------CCEEEEEECCcC----cEEE---EEeCCCCceEEeeCCC-EEEEECC------CCeEEEEeCCCCe-EEEEEE
Confidence 3 368999999884 2222 2233346777775554 7888644 3579999998862 122222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC--------CcceeEEEEE--
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS--------PRYQHAAVFV-- 342 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~--------~R~~hsav~~-- 342 (999)
.. ..+.+...-......+++||+--- ..+++...|+.+...-.|....+..|. .-.-.+.+..
T Consensus 142 V~-~~g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 142 VT-AGGRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CE-ETTEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred Ec-cCCcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 21 111112222334455889886432 245788888887666678877754322 1233445554
Q ss_pred CCEEEEEcCc
Q 001895 343 NARLHVSGGA 352 (999)
Q Consensus 343 ~~~L~V~GG~ 352 (999)
+++|||.|=.
T Consensus 215 ~~~lfVTGK~ 224 (243)
T 3mbr_X 215 HDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4789998754
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.6 Score=51.67 Aligned_cols=186 Identities=16% Similarity=0.194 Sum_probs=102.7
Q ss_pred eEEEEECCCCc--EEEecCCCCC----CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~----P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~ 224 (999)
.+++||..+++ |+.-...... .......+.++.++.||+.... ..++.||..+....|+.-.. +
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~-~-- 133 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVA-G-- 133 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECS-S--
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCC-C--
Confidence 78899998764 7765432100 0122233445567888886432 47999999887667876431 1
Q ss_pred CCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC
Q 001895 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS 304 (999)
Q Consensus 225 P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~ 304 (999)
....+.++.++ .+|+... + ..++.||..+....|+.-...... ........++.++.+|+ |..+
T Consensus 134 ---~~~~~p~~~~~-~v~v~~~-~-----g~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~v~~-g~~~--- 197 (376)
T 3q7m_A 134 ---EALSRPVVSDG-LVLIHTS-N-----GQLQALNEADGAVKWTVNLDMPSL--SLRGESAPTTAFGAAVV-GGDN--- 197 (376)
T ss_dssp ---CCCSCCEEETT-EEEEECT-T-----SEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEE-CCTT---
T ss_pred ---ceEcCCEEECC-EEEEEcC-C-----CeEEEEECCCCcEEEEEeCCCCce--eecCCCCcEEECCEEEE-EcCC---
Confidence 11222334455 6776432 2 379999998887789875432210 01112233444777776 3221
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCCCCc--------ceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCC--e
Q 001895 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPR--------YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--V 374 (999)
Q Consensus 305 ~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R--------~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~--~ 374 (999)
..++.++.. +++-.|...... |... .....++.++.+|+.+. ...+++||++++ .
T Consensus 198 ---g~l~~~d~~-tG~~~w~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~v~~~~~----------~g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 198 ---GRVSAVLME-QGQMIWQQRISQ-ATGSTEIDRLSDVDTTPVVVNGVVFALAY----------NGNLTALDLRSGQIM 262 (376)
T ss_dssp ---TEEEEEETT-TCCEEEEEECCC------------CCCCCCEEETTEEEEECT----------TSCEEEEETTTCCEE
T ss_pred ---CEEEEEECC-CCcEEEEEeccc-CCCCcccccccccCCCcEEECCEEEEEec----------CcEEEEEECCCCcEE
Confidence 246666654 455566554322 1111 22334566888888642 234899999877 4
Q ss_pred EEE
Q 001895 375 WCD 377 (999)
Q Consensus 375 W~~ 377 (999)
|..
T Consensus 263 w~~ 265 (376)
T 3q7m_A 263 WKR 265 (376)
T ss_dssp EEE
T ss_pred eec
Confidence 664
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00038 Score=76.21 Aligned_cols=71 Identities=20% Similarity=0.185 Sum_probs=47.7
Q ss_pred CeEEEecCCCCH-------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC----ChHHHHHHHH
Q 001895 699 PIKIFGDLHGQF-------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ----HSLETITLLL 755 (999)
Q Consensus 699 ~i~vvGDiHG~~-------------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~----~s~evl~ll~ 755 (999)
++++++|+|... ..|.++++.+.....+ -+|++||++|.|. ...+.+..++
T Consensus 7 ~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~~ 80 (322)
T 2nxf_A 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 80 (322)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHHH
Confidence 589999999876 5566666655322222 5889999999875 1234444444
Q ss_pred HhhhcCCCCEEEecCCcccc
Q 001895 756 ALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 756 ~lk~~~P~~v~llrGNHE~~ 775 (999)
.+-...+..++++.||||..
T Consensus 81 ~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 81 AELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHTTCSEEEECCCHHHHH
T ss_pred HHHHhcCCcEEEecCCCCcc
Confidence 33333445799999999985
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00064 Score=75.88 Aligned_cols=71 Identities=23% Similarity=0.263 Sum_probs=44.2
Q ss_pred CCeEEEecCC-C----C-----------HHHHHHHHHHhCCCCCCCCccceeEEEecc-ccCCCCChHHH----HHHHHH
Q 001895 698 APIKIFGDLH-G----Q-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGD-YVDRGQHSLET----ITLLLA 756 (999)
Q Consensus 698 ~~i~vvGDiH-G----~-----------~~~L~~il~~~g~~~~~~~~~~~~~vfLGD-yVDRG~~s~ev----l~ll~~ 756 (999)
.+|+.++|+| | . ...|.++++.+.-...+ -+|+.|| ++|++..+.+. ..+|..
T Consensus 19 mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~~~~~l~~ 92 (336)
T 2q8u_A 19 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKR 92 (336)
T ss_dssp EEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHHHHHHHHH
T ss_pred eEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHHHHHHHHH
Confidence 4799999999 8 3 34455555544321222 5888999 99999887764 455555
Q ss_pred hhhcCCCCEEEecCCccccc
Q 001895 757 LKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 757 lk~~~P~~v~llrGNHE~~~ 776 (999)
|+.. -.|+++.||||...
T Consensus 93 L~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 93 MMRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHHH--SCEEECCC------
T ss_pred HHhc--CCEEEECCCCCccc
Confidence 5533 35999999999865
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.19 Score=55.05 Aligned_cols=183 Identities=11% Similarity=0.005 Sum_probs=100.9
Q ss_pred CeEEEEECCCCcEE-EecCCCCCCCCCcCcEEEE-eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceE-EEeecCCCC-
Q 001895 150 ADVHCYDVLTNKWS-RITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGP- 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~-~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~-~v~~~g~~P- 225 (999)
+.+.++|+.+.+-. .+... ..-+.++. -++++|+.... .+.++++|+.+.+ -. .++ .+...
T Consensus 64 ~~v~viD~~t~~~~~~i~~~------~~p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~--~~~~i~-~g~~~~ 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF------TSPRYIHFLSDEKAYVTQIW------DYRIFIINPKTYE--ITGYIE-CPDMDM 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC------SSEEEEEEEETTEEEEEEBS------CSEEEEEETTTTE--EEEEEE-CTTCCT
T ss_pred CEEEEEECcccEEEEEcCCC------CCCcEEEEeCCCeEEEEECC------CCeEEEEECCCCe--EEEEEE-cCCccc
Confidence 47899999988763 34221 22234444 56799988742 3689999998853 22 222 22200
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~ 305 (999)
....-+.+++.++ +||+..- ..-+.+.++|+.+. +....-..+..| +......++++|+.........
T Consensus 129 ~~~~p~~i~~~~~-~lyv~~~----~~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 129 ESGSTEQMVQYGK-YVYVNCW----SYQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTCBCCCEEEETT-EEEEEEC----TTCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTC
T ss_pred cCCCcceEEEECC-EEEEEcC----CCCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCC
Confidence 0002334545444 8999842 12357999999988 544332222222 1223344688888753221111
Q ss_pred C----cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 306 P----LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 306 ~----~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
. ...++.++..+. +....... |....-..+++. ++.||+..+ .+++||+.+.+.
T Consensus 197 ~~~~~~~~v~~id~~t~-~v~~~~~~---~~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETF-TVEKQFKF---KLGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SSCBCCCEEEEEETTTT-EEEEEEEC---CTTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred ccccCCceEEEEECCCC-eEEEEEec---CCCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 1 256888887654 33322111 122223455555 567888643 489999998875
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.32 Score=53.28 Aligned_cols=228 Identities=8% Similarity=-0.036 Sum_probs=126.2
Q ss_pred cCeEEEEECCCCcEEEecCC--CCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPF--GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~--g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+..||+.++++..-... ...+.....+.++..++++|+.... .+.+.++|+.+.... ..++ .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~-~~i~---~--- 82 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEV-GRIT---G--- 82 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEE-EEEE---C---
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEE-EEcC---C---
Confidence 35789999999987653210 0113334456677789999998753 257999999885311 2232 1
Q ss_pred CCcccEEEE-ECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCC--CCccceEEEEEeCCEEEEEeccCCC
Q 001895 227 PRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP--PPCMYATASARSDGLLLLCGGRDAS 303 (999)
Q Consensus 227 ~R~~h~~~v-~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P--~~r~~~~a~~~~~~~LyvfGG~~~~ 303 (999)
...-+.+++ -++ ++|+.... -+.+.++|+.+....++. . .+... ...-.+ +++.++++|+..-.
T Consensus 83 ~~~p~~i~~~~~g-~lyv~~~~-----~~~v~~iD~~t~~~~~~i-~-~g~~~~~~~~p~~--i~~~~~~lyv~~~~--- 149 (328)
T 3dsm_A 83 FTSPRYIHFLSDE-KAYVTQIW-----DYRIFIINPKTYEITGYI-E-CPDMDMESGSTEQ--MVQYGKYVYVNCWS--- 149 (328)
T ss_dssp CSSEEEEEEEETT-EEEEEEBS-----CSEEEEEETTTTEEEEEE-E-CTTCCTTTCBCCC--EEEETTEEEEEECT---
T ss_pred CCCCcEEEEeCCC-eEEEEECC-----CCeEEEEECCCCeEEEEE-E-cCCccccCCCcce--EEEECCEEEEEcCC---
Confidence 222334444 455 89998743 357999999988333322 1 11100 001112 22268999998421
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCC-CcccCCeEEEEECCCCeEEEcccC
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-MVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~-~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..+.+..++..+. +..+....+..| +.+++- ++++|+......... .....+.|+++|+++.+....-..
T Consensus 150 --~~~~v~viD~~t~-~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 150 --YQNRILKIDTETD-KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp --TCCEEEEEETTTT-EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred --CCCEEEEEECCCC-eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 1245777777654 444433322222 223332 588888754321110 001136799999999986643222
Q ss_pred cCCCCCCCcccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCCcCcCcEEEeecc
Q 001895 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLLDDLLVAEDL 439 (999)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~~~l~Dv~~ld~~ 439 (999)
+....-.++++. +++||+..+ .++++|..
T Consensus 222 ---------------------~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~ 252 (328)
T 3dsm_A 222 ---------------------KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVE 252 (328)
T ss_dssp ---------------------CTTCCCEEEEECTTSCEEEEESS--------SEEEEETT
T ss_pred ---------------------CCCCCceeEEEecCCCEEEEEcc--------EEEEEECC
Confidence 111122344554 568888754 67888764
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0013 Score=74.92 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=48.8
Q ss_pred CCeEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHH----HHHHHHhhhc
Q 001895 698 APIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET----ITLLLALKVE 760 (999)
Q Consensus 698 ~~i~vvGDiHG~~-------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev----l~ll~~lk~~ 760 (999)
.+|++++|+|+.. ..|.++++.+.....+ -+|+.||++|++.-+.+. +.+|..|+..
T Consensus 21 mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~ 94 (386)
T 3av0_A 21 MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHEN 94 (386)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 4699999999762 3466777665432222 688899999999555443 3444445331
Q ss_pred CCCCEEEecCCccccc
Q 001895 761 YPNNVHLIRGNHEAAD 776 (999)
Q Consensus 761 ~P~~v~llrGNHE~~~ 776 (999)
+-.|+++.||||...
T Consensus 95 -~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 95 -NIKVYIVAGNHEMPR 109 (386)
T ss_dssp -TCEEEECCCGGGSCS
T ss_pred -CCcEEEEcCCCCCCc
Confidence 236999999999854
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.54 Score=52.07 Aligned_cols=178 Identities=13% Similarity=0.187 Sum_probs=104.2
Q ss_pred cCeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 149 TADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
...++.||+.+++ |+.-.... ....+...+.++.++.+|+ |.. ...++.||..+....|..-. ..|.
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~-g~~------~g~l~~~d~~tG~~~w~~~~---~~~~ 220 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVV-GGD------NGRVSAVLMEQGQMIWQQRI---SQAT 220 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEE-CCT------TTEEEEEETTTCCEEEEEEC---CC--
T ss_pred CCeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEE-EcC------CCEEEEEECCCCcEEEEEec---ccCC
Confidence 4469999998875 88654321 1111222344555777666 321 24699999988766788654 2221
Q ss_pred CC--------cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001895 227 PR--------YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (999)
Q Consensus 227 ~R--------~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfG 298 (999)
.. .....++.++ .+|+.+ .+ ..+++||+.+....|+.-.. ........++.+|+..
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~-~v~~~~-~~-----g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~ 284 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNG-VVFALA-YN-----GNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVD 284 (376)
T ss_dssp ---------CCCCCCEEETT-EEEEEC-TT-----SCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEE
T ss_pred CCcccccccccCCCcEEECC-EEEEEe-cC-----cEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEc
Confidence 11 1223334454 677754 22 36899999888778986421 1233455688898875
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 299 G~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
. ...++.++.. +++-.|..... ..+...+.++.++.||+... ...+++||+.+++
T Consensus 285 ~-------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 285 Q-------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGR 339 (376)
T ss_dssp T-------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCC
T ss_pred C-------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCc
Confidence 3 1246777765 44656765421 12233345567888888632 2359999999886
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0014 Score=73.03 Aligned_cols=70 Identities=21% Similarity=0.235 Sum_probs=45.8
Q ss_pred CeEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHH----HHHHhhhcC
Q 001895 699 PIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIT----LLLALKVEY 761 (999)
Q Consensus 699 ~i~vvGDiHG~~-------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~----ll~~lk~~~ 761 (999)
++++++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+. .
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~ 74 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE-H 74 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-C
Confidence 588999999874 3455555544322222 68889999999855544443 3444432 1
Q ss_pred CCCEEEecCCcccc
Q 001895 762 PNNVHLIRGNHEAA 775 (999)
Q Consensus 762 P~~v~llrGNHE~~ 775 (999)
.-.|+++.||||..
T Consensus 75 ~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCcCCCc
Confidence 23599999999985
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0031 Score=73.02 Aligned_cols=61 Identities=8% Similarity=-0.003 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEe-cCCeEEEEecccccCCCCCCeEEEEEEcCCc
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERF-AQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~-~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~ 944 (999)
+.+.+.+.+++.++++++-||.=........ .+|+-+.++.+.-.+. ..+.=+++.++++.
T Consensus 261 ~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~-~p~~y~il~i~~~~ 322 (443)
T 2xmo_A 261 YNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV-FPHKYGNITYSAKN 322 (443)
T ss_dssp THHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-TTCEEEEEEEETTT
T ss_pred cHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-CCCCeEEEEEeCCC
Confidence 5678889999999999999997654332221 2444344443333332 23344667776654
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.26 E-value=1.4 Score=46.29 Aligned_cols=208 Identities=16% Similarity=0.062 Sum_probs=123.5
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~ 257 (999)
+.....++.+|+..|..+ .+.+.++|+.+.. -..-. ++|..-++.+++..++ +||+....+ +.++
T Consensus 24 qGL~~~~~~LyestG~~g----~S~v~~vD~~tgk--v~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~~-----~~v~ 88 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG----RSSVRKVDLETGR--ILQRA---EVPPPYFGAGIVAWRD-RLIQLTWRN-----HEGF 88 (243)
T ss_dssp EEEEEETTEEEEEECCTT----SCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESSS-----SEEE
T ss_pred ccEEEECCEEEEECCCCC----CceEEEEECCCCC--EEEEE---eCCCCcceeEEEEeCC-EEEEEEeeC-----CEEE
Confidence 466777889999988643 2579999999863 33322 4566667788888887 899986543 5899
Q ss_pred EEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-cce
Q 001895 258 ALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-RYQ 336 (999)
Q Consensus 258 ~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~-R~~ 336 (999)
+||+.+. +-..--+.+ ...-+++..+++||+.-| .+.++.+|+.+...-.-..+... +.+ +.-
T Consensus 89 v~D~~tl--~~~~ti~~~------~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~-g~~~~~l 152 (243)
T 3mbr_X 89 VYDLATL--TPRARFRYP------GEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG-GRPLDNL 152 (243)
T ss_dssp EEETTTT--EEEEEEECS------SCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCCE
T ss_pred EEECCcC--cEEEEEeCC------CCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC-Ccccccc
Confidence 9999886 332221111 122345555778888744 23577888876644444444321 222 222
Q ss_pred eEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC-CCCCCCcccccCCCCCccCCCCcceeEEEEE-
Q 001895 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV- 414 (999)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~- 414 (999)
.-+...+++||+--- ..++|.+.|+++++-...-.+.. .+.... ...+..-.--+.+..
T Consensus 153 NeLe~~~G~lyanvw---------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~----------~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 153 NELEWVNGELLANVW---------LTSRIARIDPASGKVVAWIDLQALVPDADA----------LTDSTNDVLNGIAFDA 213 (243)
T ss_dssp EEEEEETTEEEEEET---------TTTEEEEECTTTCBEEEEEECGGGSTTTTS----------CCCTTSSCEEEEEEET
T ss_pred eeeEEeCCEEEEEEC---------CCCeEEEEECCCCCEEEEEECCcCcccccc----------ccCCcCCceEEEEEcC
Confidence 335566899886421 25789999999986443332211 110000 000112233455555
Q ss_pred -CCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 415 -GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 415 -~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
+++|||.|= +...+|.+.+.+
T Consensus 214 ~~~~lfVTGK-----~wp~~~~v~~~~ 235 (243)
T 3mbr_X 214 EHDRLFVTGK-----RWPMLYEIRLTP 235 (243)
T ss_dssp TTTEEEEEET-----TCSEEEEEEECC
T ss_pred CCCEEEEECC-----CCCcEEEEEEec
Confidence 679999985 467777777654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.23 Score=52.97 Aligned_cols=185 Identities=11% Similarity=-0.010 Sum_probs=113.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||+-.|..+. +.+..+|+.+++-..-... +..-.+.+.+..+++||+...
T Consensus 52 ~~~LyestG~~g~------------------------S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 52 NGYFYESTGLNGR------------------------SSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp TTEEEEEEEETTE------------------------EEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe
Confidence 5789999886432 3788999999876554443 333455667888999999965
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 105 ~------~~~v~v~D~~t~~-~~~ti~------~~~eG~glt~dg~-~L~~SdG------s~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 105 K------NGLGFVWNIRNLR-QVRSFN------YDGEGWGLTHNDQ-YLIMSDG------TPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp S------SSEEEEEETTTCC-EEEEEE------CSSCCCCEEECSS-CEEECCS------SSEEEEECTTTCS-EEEEEE
T ss_pred e------CCEEEEEECccCc-EEEEEE------CCCCceEEecCCC-EEEEECC------CCeEEEEcCCCCe-EEEEEE
Confidence 3 3689999999853 223332 2336666765554 7888643 3579999998862 223332
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC-------CcceeEEEEE--C
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS-------PRYQHAAVFV--N 343 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~-------~R~~hsav~~--~ 343 (999)
.... ..+...-......+++||+--- ..+.+...|+.+...-.|....+..|. .-.-.+.++. .
T Consensus 164 V~~~-g~~~~~lNELe~~~G~lyan~w------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 164 VTAH-GEELPELNELEWVDGEIFANVW------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred eccC-CccccccceeEEECCEEEEEEc------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 2111 0011111123344889886421 245788888877656677777654321 1233555555 4
Q ss_pred CEEEEEcCc
Q 001895 344 ARLHVSGGA 352 (999)
Q Consensus 344 ~~L~V~GG~ 352 (999)
++|||.|-.
T Consensus 237 ~~lfVTGK~ 245 (262)
T 3nol_A 237 HRLFVTGKL 245 (262)
T ss_dssp TEEEEEETT
T ss_pred CEEEEECCC
Confidence 789998754
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=1.2 Score=47.69 Aligned_cols=185 Identities=10% Similarity=0.033 Sum_probs=107.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
+.+..+|+.+++-..-... +....+.+.+..++.+|+..-. .+.+++||..+.. .-..++ .+ .| .
T Consensus 44 s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~-v~~~i~-~g-~~---~ 108 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS-NIKNFT-HQ-MK---D 108 (266)
T ss_dssp CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE-EEEEEE-CC-SS---S
T ss_pred CEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc-EEEEEE-CC-CC---C
Confidence 4799999999886554333 2333456777888999998643 3689999998752 112222 12 22 3
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
+.+++. ++.++|+.-| .+.++.+|+.+.. .-..+... ..+.+...-....+.++++|+--. ..+.
T Consensus 109 g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~-v~~~I~Vg-~~~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 109 GWGLAT-DGKILYGSDG------TSILYEIDPHTFK-LIKKHNVK-YNGHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp CCEEEE-CSSSEEEECS------SSEEEEECTTTCC-EEEEEECE-ETTEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred eEEEEE-CCCEEEEECC------CCeEEEEECCCCc-EEEEEEEC-CCCcccccceeEEEECCEEEEecC------CCCe
Confidence 444544 4447888643 3689999998862 12222221 111111112223334888887532 2457
Q ss_pred EEEEecCCCCeEEEEECCCCC--------CCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCC
Q 001895 310 AYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~--------P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~ 373 (999)
+..+|+.+...-.|....+.. +..-.-++.++. ++++||.|+. .+.|++.++.+.
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---------~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---------WPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---------CSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---------CCeEEEEEEecc
Confidence 888888876556677664321 111233455555 4689999875 355777776543
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.76 Score=51.45 Aligned_cols=188 Identities=14% Similarity=0.063 Sum_probs=94.1
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+++||+.+++.......+........-..+.+ ++.+|+.|+. ...+++||+.+....+ .+. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~-~~~-----~~~~ 212 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKA-TVD-----LTGK 212 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEE-EEE-----CSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEE-EEc-----CCCC
Confidence 589999998887765332110011111122233 5688887764 2579999998753122 222 1112
Q ss_pred cccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC--
Q 001895 229 YGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV-- 305 (999)
Q Consensus 229 ~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~-- 305 (999)
.-.+++.. ++..+|+.++.++ .+.+||+.+. +....-.... .....+...++..+++++......
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDKIG-----LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCCCS-----EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecCCC-----CceEEEEcCCCCEEEEEECCCCcccc
Confidence 22333343 3346777765544 7999999887 5443322211 122222333554555555433221
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
....++.++..+. +..+.... +..-..+++. +..+|+.++. .+.+.+||+.+.+-..
T Consensus 281 ~dg~i~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 281 GGGRLGIYSMDKE-KLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQK 339 (433)
T ss_dssp CCEEEEEEETTTT-EEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCC-cEEeeccC-----CCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEEE
Confidence 1235666665543 22222110 0111223332 3368887654 3469999999876443
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.3 Score=52.14 Aligned_cols=182 Identities=7% Similarity=-0.069 Sum_probs=109.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||+-.|.. ..+..+|+.+++-..-. . +..-.+.+.+..+++||+...
T Consensus 64 ~~~Ly~stG~~--------------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 64 QGHFFESTGHQ--------------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp TTEEEEEETTT--------------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEES
T ss_pred CCEEEEEcCCC--------------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEc
Confidence 68999999953 24888999988643332 2 233345668888999999865
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ +||+.-| .+.++.+|+.+.. .-..+.
T Consensus 114 ~------~~~v~V~D~~Tl~-~~~ti~------~~~eGwGLt~Dg~-~L~vSdG------s~~l~~iDp~T~~-v~~~I~ 172 (268)
T 3nok_A 114 T------EGLLFTWSGMPPQ-RERTTR------YSGEGWGLCYWNG-KLVRSDG------GTMLTFHEPDGFA-LVGAVQ 172 (268)
T ss_dssp S------SCEEEEEETTTTE-EEEEEE------CSSCCCCEEEETT-EEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred c------CCEEEEEECCcCc-EEEEEe------CCCceeEEecCCC-EEEEECC------CCEEEEEcCCCCe-EEEEEE
Confidence 3 3689999998852 122232 2334677776665 8998754 3589999998862 222222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCC--------CCCcceeEEEEE--
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV-- 342 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~--------P~~R~~hsav~~-- 342 (999)
... .+.+...-......+++||+-- + ..+.+..+|+.+...-.|....+.. +..-.-.+.+..
T Consensus 173 V~~-~g~~v~~lNeLe~~dG~lyanv-w-----~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 173 VKL-RGQPVELINELECANGVIYANI-W-----HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp CEE-TTEECCCEEEEEEETTEEEEEE-T-----TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred eCC-CCcccccccccEEeCCEEEEEE-C-----CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 211 1111112223344588888632 1 2457888888776556677765321 111233444444
Q ss_pred CCEEEEEcCc
Q 001895 343 NARLHVSGGA 352 (999)
Q Consensus 343 ~~~L~V~GG~ 352 (999)
+++|||.|=.
T Consensus 246 ~~rlfVTGK~ 255 (268)
T 3nok_A 246 SGRIFMTGKL 255 (268)
T ss_dssp TCCEEEEETT
T ss_pred CCEEEEeCCC
Confidence 4689988754
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.53 Score=57.36 Aligned_cols=114 Identities=15% Similarity=0.159 Sum_probs=66.7
Q ss_pred eEEEEECCCCc--EEEecCCCCCCC-----CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..+++ |+.-........ .....+.++.+++||+... ...++.+|..+....|+.-.....
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~ 160 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQ 160 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCc
Confidence 68999998875 887543210000 0122345667888888643 257999999887777987531000
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 161 ~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 161 KGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 111112223345565 676654322222346799999999887898754
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=95.75 E-value=0.004 Score=70.70 Aligned_cols=68 Identities=21% Similarity=0.235 Sum_probs=45.4
Q ss_pred CeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEecccc-CCCCChHHHH----HHHHHh
Q 001895 699 PIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQHSLETI----TLLLAL 757 (999)
Q Consensus 699 ~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyV-DRG~~s~evl----~ll~~l 757 (999)
+|+.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..|
T Consensus 2 rilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~l 75 (379)
T 3tho_B 2 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKRM 75 (379)
T ss_dssp EEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHHH
T ss_pred eEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHHH
Confidence 5889999997554 455555443211122 588899999 9987776544 344444
Q ss_pred hhcCCCCEEEecCCccc
Q 001895 758 KVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 758 k~~~P~~v~llrGNHE~ 774 (999)
+.. -.|+++.||||.
T Consensus 76 ~~~--~~v~~i~GNHD~ 90 (379)
T 3tho_B 76 MRT--APVVVLPGNQDW 90 (379)
T ss_dssp HHH--SCEEECCCTTSC
T ss_pred HhC--CCEEEEcCCCcc
Confidence 433 469999999994
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.0099 Score=68.59 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=37.2
Q ss_pred CeEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001895 699 PIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (999)
Q Consensus 699 ~i~vvGDiHG~------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (999)
+|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 78 rilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 78 RILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp EEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHHH
T ss_pred EEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 58999999964 33566666665332222 688999999999999888765443
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.011 Score=67.84 Aligned_cols=73 Identities=23% Similarity=0.223 Sum_probs=50.4
Q ss_pred CCeEEEecCCCCH------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 001895 698 APIKIFGDLHGQF------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (999)
Q Consensus 698 ~~i~vvGDiHG~~------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (999)
.+|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+-.+
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~ 106 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLELLRKYCMGD 106 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCS
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHHHHHHhccC
Confidence 4589999999532 3556666554322222 6889999999999888877665554321
Q ss_pred -------------------------------CCCCEEEecCCccccc
Q 001895 761 -------------------------------YPNNVHLIRGNHEAAD 776 (999)
Q Consensus 761 -------------------------------~P~~v~llrGNHE~~~ 776 (999)
..-.||++.||||...
T Consensus 107 ~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 107 RPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp SCCCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred CcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 1236999999999864
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=95.39 E-value=0.014 Score=66.55 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=37.9
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001895 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (999)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (999)
.+++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 358999999975 34566666665332222 688999999999999887765443
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=1.5 Score=52.28 Aligned_cols=112 Identities=12% Similarity=0.101 Sum_probs=65.4
Q ss_pred eEEEEEC-CCCc--EEEecCCCCCCC--C---CcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC
Q 001895 151 DVHCYDV-LTNK--WSRITPFGEPPT--P---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 151 dv~~yD~-~t~~--W~~l~~~g~~P~--p---R~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
.+++||. .+.+ |+.-........ . ....+.++.+++||+... ...++.+|..+....|+.-..
T Consensus 74 ~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~-- 144 (571)
T 2ad6_A 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVC-- 144 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC--
T ss_pred EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCC--
Confidence 7899999 7764 887533210000 0 112345667888888743 247999999887677986531
Q ss_pred CCCCC-CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 223 PGPGP-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 223 ~~P~~-R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
..+.. ....+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 145 ~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 145 DPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 11111 11223345565 777654321111235799999998887897643
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=95.12 E-value=2.5 Score=44.95 Aligned_cols=207 Identities=8% Similarity=0.032 Sum_probs=118.8
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~ 257 (999)
.+....++.+|+..|..+ .+.+.++|+.+.. -..-. +++..-++.+++..++ +||+....+ +.++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgk--v~~~~---~l~~~~FgeGit~~g~-~ly~ltw~~-----~~v~ 110 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGK--TLQQI---ELGKRYFGEGISDWKD-KIVGLTWKN-----GLGF 110 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESSS-----SEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCc--EEEEE---ecCCccceeEEEEeCC-EEEEEEeeC-----CEEE
Confidence 445556889999988632 2478999999863 32222 3444455677778877 899986543 5899
Q ss_pred EEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-cce
Q 001895 258 ALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-RYQ 336 (999)
Q Consensus 258 ~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~-R~~ 336 (999)
+||+.+.. .=..++..+ ...+++..+++||+.-| .+.++.+|+.+.....-+.+... +.+ +.-
T Consensus 111 v~D~~t~~-~~~ti~~~~-------eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~-g~~~~~l 174 (262)
T 3nol_A 111 VWNIRNLR-QVRSFNYDG-------EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH-GEELPEL 174 (262)
T ss_dssp EEETTTCC-EEEEEECSS-------CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET-TEECCCE
T ss_pred EEECccCc-EEEEEECCC-------CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC-Ccccccc
Confidence 99998862 112222211 22344455677888643 24578888876644444444321 111 111
Q ss_pred eEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC-CCCCCCcccccCCCCCccCCCCcceeEEEEE-
Q 001895 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV- 414 (999)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~- 414 (999)
.-+...+++||+-- ...++|.+.|+++++-...-.+.. .+... ...+..-.-.+.+..
T Consensus 175 NELe~~~G~lyan~---------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-----------~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 175 NELEWVDGEIFANV---------WQTNKIVRIDPETGKVTGIIDLNGILAEAG-----------PLPSPIDVLNGIAWDK 234 (262)
T ss_dssp EEEEEETTEEEEEE---------TTSSEEEEECTTTCBEEEEEECTTGGGGSC-----------SCCSSCCCEEEEEEET
T ss_pred ceeEEECCEEEEEE---------ccCCeEEEEECCCCcEEEEEECCcCccccc-----------cccCcCCceEEEEEcC
Confidence 12445589988632 125789999999997544333210 00000 000112233556655
Q ss_pred -CCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 415 -GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 415 -~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
+++|||.|-+ ...+|.+.+.+
T Consensus 235 ~~~~lfVTGK~-----Wp~~~ev~~~~ 256 (262)
T 3nol_A 235 EHHRLFVTGKL-----WPKVFEITLTQ 256 (262)
T ss_dssp TTTEEEEEETT-----CSEEEEEEEEE
T ss_pred CCCEEEEECCC-----CCceEEEEEec
Confidence 5799999853 56677766644
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=95.03 E-value=1.8 Score=47.61 Aligned_cols=178 Identities=16% Similarity=0.156 Sum_probs=92.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.++++|+.+++-....... ..-++++.. +..+|+.|+.+ ..+++||+.+.. ....-.. +
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~--~~~~~~~-----~ 73 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAHS------NDVSIIDTATNN--VIATVPA-----G 73 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTE--EEEEEEC-----S
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCCC------CeEEEEECCCCe--EEEEEEC-----C
Confidence 47899999988655443221 112333333 33677777542 579999998753 3222211 1
Q ss_pred CcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCC
Q 001895 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSV 305 (999)
Q Consensus 228 R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~LyvfGG~~~~~~ 305 (999)
..-.+++... +.+||+.|..+ ..+.+||+.+. +......... .....+...+ ..+|+.++.+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGD---- 137 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECSS-----SEEEEEECTTSSEEEEEETTT----
T ss_pred CCccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCCC-----CcceEEECCCCCEEEEEeCCC----
Confidence 1223343433 33566665443 46999999887 4433322221 1122222234 4566776543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
..++.++..+. +..+....+. .-..+++. +..||+.++. .+.|.+||+.+.+....
T Consensus 138 --~~v~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 138 --KTVSVINTVTK-AVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred --CEEEEEECCCC-cEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEEE
Confidence 24556665443 4333332221 11334443 3467777653 24599999998875543
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=94.95 E-value=2 Score=48.51 Aligned_cols=191 Identities=13% Similarity=0.025 Sum_probs=96.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..++.+|+....-..+.... .. -.+.+.. +++.+++++.... ...++++|+.+.. ...+. ..+ .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~-v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~--~~~l~---~~~--~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QP-LMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGA--VRQVA---SFP--R 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SC-EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC--EEEEE---CCS--S
T ss_pred ceEEEEcCCCCCCEEEeCCC----Cc-ceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCc--EEEee---cCC--C
Confidence 58899998876555553221 11 1122222 3455555553221 2589999998753 55443 111 1
Q ss_pred cccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
...+.+.-. +.+|++.+..++ ...+|.+|+.+. +...+..... .........+++.+++++.... .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~l~~~s~~~g---~ 290 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS-----NNTEPTWFPDSQNLAFTSDQAG---R 290 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCCSS-----CEEEEEECTTSSEEEEEECTTS---S
T ss_pred cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCCCC-----cccceEECCCCCEEEEEECCCC---C
Confidence 222333333 334555554443 247999999887 6666543321 1222233346665566553221 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..+|.++..+. . ...... ......+.++. +++.+++++.... ...|+++|+.+.+...+..
T Consensus 291 ~~i~~~d~~~~-~--~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 291 PQVYKVNINGG-A--PQRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp CEEEEEETTSS-C--CEECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECCC
T ss_pred cEEEEEECCCC-C--EEEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEecC
Confidence 35677766543 1 112211 12222233332 5665555554321 3469999999998876543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=3.9 Score=43.58 Aligned_cols=209 Identities=10% Similarity=-0.014 Sum_probs=115.7
Q ss_pred cEEEEeC-CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeE
Q 001895 178 HVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (999)
Q Consensus 178 hsa~~~g-~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv 256 (999)
|..+..+ +.+|+..|... .+.+.++|+.+.. -...- +++....+.+++..++ +||+..-. -+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~--v~~~i---~l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v 88 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGK--VENIH---KMDDSYFGEGLTLLNE-KLYQVVWL-----KNIG 88 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEETT-----CSEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCC--EEEEE---ecCCCcceEEEEEeCC-EEEEEEec-----CCEE
Confidence 6677666 69999877421 2679999999864 22222 2344445567777776 89998643 3579
Q ss_pred EEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-c
Q 001895 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (999)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R-~ 335 (999)
++||+.+....-+ ++. + .| ...+....++++|+.-| .+.++.+|+.+...-.-..+... +.+. .
T Consensus 89 ~viD~~t~~v~~~-i~~-g-~~----~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~-~~p~~~ 153 (266)
T 2iwa_A 89 FIYDRRTLSNIKN-FTH-Q-MK----DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYN-GHRVIR 153 (266)
T ss_dssp EEEETTTTEEEEE-EEC-C-SS----SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEEECCCCcEEEE-EEC-C-CC----CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCC-Cccccc
Confidence 9999987622221 221 1 11 12334455678888643 34678888876533333333321 1111 1
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC-CCCCCCcccccCCCCCccCCCCcceeEEEEE
Q 001895 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (999)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (999)
-..+.+.++++|+--. ..++|.+.|+++++-...-.+.. .+.. . ....+..-.-.+++..
T Consensus 154 ~nele~~dg~lyvn~~---------~~~~V~vID~~tg~V~~~I~~~g~~~~~------~----~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 154 LNELEYINGEVWANIW---------QTDCIARISAKDGTLLGWILLPNLRKKL------I----DEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEEEEETTEEEEEET---------TSSEEEEEETTTCCEEEEEECHHHHHHH------H----HTTCTTCCCEEEEEEE
T ss_pred ceeEEEECCEEEEecC---------CCCeEEEEECCCCcEEEEEECCCccccc------c----cccccccCceEEEEEc
Confidence 2234455888887532 15789999999986433222200 0000 0 0000011122555555
Q ss_pred --CCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 415 --GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 415 --~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
++++||-|+.. +.++++++..
T Consensus 215 ~~~~~lfVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTC-----SEEEEEEEEE
T ss_pred CCCCEEEEECCCC-----CeEEEEEEec
Confidence 56999999864 5566666554
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=6.3 Score=42.08 Aligned_cols=187 Identities=16% Similarity=0.096 Sum_probs=92.4
Q ss_pred CeEEEEECCCCcEEEecCCCCCCC-----CCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPT-----PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~-----pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
+.++.||+.+.+-......+.... +..-+.++.. ++.+|+.+... ...+++||+.+... -..++.
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~-~~~~~~-- 182 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKL-KTAIQN-- 182 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEE-EEEECC--
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCce-EEEecC--
Confidence 478999998877433322211111 1112334443 45777776321 24699999987531 111210
Q ss_pred CCCCCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEE-EEe-CCEEEEEec
Q 001895 223 PGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS-ARS-DGLLLLCGG 299 (999)
Q Consensus 223 ~~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~-~~~-~~~LyvfGG 299 (999)
....-+.++.. ++++||+... + +.+++||+.+....|..... ...+ ......+ ... ++.+|+...
T Consensus 183 ---~~~~~~~~~~s~dg~~l~~~~~-~-----~~i~~~d~~~~~~~~~~~~~-~~~~--~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 183 ---TGKMSTGLALDSEGKRLYTTNA-D-----GELITIDTADNKILSRKKLL-DDGK--EHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp ---CCTTCCCCEEETTTTEEEEECT-T-----SEEEEEETTTTEEEEEEECC-CSSS--CCCEEEEEEETTTTEEEEEES
T ss_pred ---CCCccceEEECCCCCEEEEEcC-C-----CeEEEEECCCCeEEEEEEcC-CCCC--CcccceEEECCCCCEEEEEeC
Confidence 12222333343 3446776543 2 47889999887433433221 1111 1122222 222 455666542
Q ss_pred cCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 300 ~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
. ...++.++..+. +..+....+ .+ ..+++. ++.+|+.+.. .+.|.+||+.+.+...
T Consensus 251 ~------~~~v~~~d~~~~-~~~~~~~~~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 251 K------AAEVLVVDTRNG-NILAKVAAP---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp S------SSEEEEEETTTC-CEEEEEECS---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred C------CCEEEEEECCCC-cEEEEEEcC---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEE
Confidence 2 245677776544 333222222 12 223333 3468887542 3569999999987665
Q ss_pred c
Q 001895 378 T 378 (999)
Q Consensus 378 v 378 (999)
.
T Consensus 309 ~ 309 (353)
T 3vgz_A 309 T 309 (353)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=94.42 E-value=1.8 Score=44.72 Aligned_cols=190 Identities=11% Similarity=0.047 Sum_probs=94.9
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCC-CCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ-QRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t-~t~kW~~v~~~g~~P 225 (999)
....++++|+.+++...+.... ..-.+++.. +++.+++++. ..+++||+.+ .. ...+. ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~--~~~~~---~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPS--PEKVD---TGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCS--CEECC---CTT
T ss_pred cceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCC--ceEec---ccc
Confidence 5568999999998877664321 112223322 3455555542 4799999987 53 44432 112
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASS 304 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-LyvfGG~~~~~ 304 (999)
....-..++...++..+++++.+.. ....+|.+|+.+. ....+.... . ........+++ |++.++.++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~-----~-~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKNL-----P-SYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSSS-----S-EEEEEECTTSSEEEEEEEETT--
T ss_pred ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecCC-----C-ccceEECCCCCEEEEEECCCC--
Confidence 1122223334334345555553322 3468999998776 444443321 1 12222333444 444454432
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCE-EEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 305 ~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~-L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
...+|.++.... . ....... ......+++. +++ |++.+..++ ...+|.+++.+.....+..
T Consensus 152 --~~~l~~~~~~~~-~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 152 --VFDIYSMDIDSG-V--ETRLTHG---EGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp --EEEEEEEETTTC-C--EEECCCS---SSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECCC
T ss_pred --ceEEEEEECCCC-c--ceEcccC---CCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEec
Confidence 235666665433 2 2222211 1112233332 454 444443322 3568999988877766543
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=94.33 E-value=0.019 Score=62.25 Aligned_cols=21 Identities=5% Similarity=0.267 Sum_probs=18.0
Q ss_pred HHHHHHHHHcCCcEEEEeccc
Q 001895 885 DRVMEFCNNNDLQLIVRAHEC 905 (999)
Q Consensus 885 ~~~~~fl~~~~l~~iiR~H~~ 905 (999)
+.+.+.++++++++++-||.=
T Consensus 203 ~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 203 KQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp HHTHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHHHcCCcEEEECChh
Confidence 567778999999999999974
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=94.27 E-value=3.5 Score=43.57 Aligned_cols=179 Identities=13% Similarity=0.085 Sum_probs=89.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcC-cEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAA-HVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~-hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+.+||+.+.++....... ..... .+++.. ++..++.|+.+ ..+.+||+.+.. ....- ... .
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~--~~~~~---~~~-~ 183 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT---SSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQT--LVRQF---QGH-T 183 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE---CSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE--EEEEE---CCC-S
T ss_pred CcEEEEECCCCCcceeeecc---cCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCc--eeeee---ecc-c
Confidence 47889999888754433221 11111 122222 34566666642 469999998742 22221 111 1
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
..-.+++...++.+++.|+.++ .+..||+.+. +-........ .........++.++++|+.++
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~----- 246 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESS----- 246 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTS-----
T ss_pred CceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecCCC-----ceEEEEECCCCCEEEEEcCCC-----
Confidence 1222333333445677777654 6889999877 3322211111 122223334677777777543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
.+..++........ ... ....-.++++. ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 247 -~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 247 -NVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGASI 300 (337)
T ss_dssp -CEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred -cEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecCC---------CcEEEEECCCCeEE
Confidence 24455554442221 111 11122333333 46677777642 35889999887655
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=94.26 E-value=3 Score=45.74 Aligned_cols=178 Identities=16% Similarity=0.096 Sum_probs=90.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.++++|+.+++.......+ . .-.+++.. +..||+.|.. ...+++||+.+.. ...... ..
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~--~~~~~~-----~~ 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNT--VAGTVK-----TG 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEE-----CS
T ss_pred CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCe--EEEEEe-----CC
Confidence 47899999988765543332 1 22233333 3466666543 2579999998853 322221 11
Q ss_pred CcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCC
Q 001895 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSV 305 (999)
Q Consensus 228 R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~LyvfGG~~~~~~ 305 (999)
..-.+++... +..||+.++.++ .+++||+.+. +....-..... . ...+...+ +.||+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~-----~v~~~d~~~~--~~~~~~~~~~~----~-~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDK-----TVSVINTVTK--AVINTVSVGRS----P-KGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTT-----EEEEEETTTT--EEEEEEECCSS----E-EEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCCC-----EEEEEECCCC--cEEEEEecCCC----c-ceEEECCCCCEEEEEeCCC----
Confidence 2223444433 336777776543 7999999887 54443332221 1 22222233 4666766543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
..++.++..+. ........ ...-.++++. ++ .||+.+. .. ....|.+||+.+.+-.
T Consensus 180 --~~v~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~-~~------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 180 --MSISVIDTVTN-SVIDTVKV-----EAAPSGIAVNPEGTKAYVTNV-DK------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEEC-----SSEEEEEEECTTSSEEEEEEE-CS------SCCEEEEEETTTTEEE
T ss_pred --CEEEEEECCCC-eEEEEEec-----CCCccceEECCCCCEEEEEec-Cc------CCCcEEEEECCCCeEE
Confidence 23566665543 22222111 1112233333 34 4555442 11 1456999999988644
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=94.22 E-value=2.5 Score=45.02 Aligned_cols=181 Identities=10% Similarity=0.101 Sum_probs=96.1
Q ss_pred CeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
+.++.+|..+++ |+.-... ....|.+.+. ++.+|+.+ .+.++.||. +....|+.-. +.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~~ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----PA 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----CT
T ss_pred CEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----CC
Confidence 478899997775 7654321 1123444444 55777732 246999999 4444677543 22
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCC-CCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYATASARSDGLLLLCGGRDASSV 305 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~-~P~~r~~~~a~~~~~~~LyvfGG~~~~~~ 305 (999)
...-+++....++.+++....+ ...++.||... ...|+.-..... .+. ...+.+....++.+++....
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~G-k~l~~~~~~~~~~~~~-~~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH----PSTILEVNMKG-EVLSKTEFETGIERPH-AQFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST----TEEEEEECTTS-CEEEEEEECCSCSSGG-GSCSCCEECTTSCEEEEETT-----
T ss_pred CccccccEECCCCCEEEEecCC----CCEEEEEeCCC-CEEEEEeccCCCCccc-ccccCceECCCCCEEEEecC-----
Confidence 2234455555555566554321 23678888743 345654322111 110 01112233445666655432
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--EEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--W~~ 377 (999)
...+..|+.. |+..|....+..| +++... ++.++|.+.. ...|..||+++++ |+.
T Consensus 145 -~~~v~~~d~~--G~~~w~~~~~~~~-----~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 145 -TSEVREIAPN--GQLLNSVKLSGTP-----FSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp -TTEEEEECTT--SCEEEEEECSSCC-----CEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEE
T ss_pred -CCEEEEECCC--CCEEEEEECCCCc-----cceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEe
Confidence 2346777765 5555655443211 334444 6788887653 2348999999664 554
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.057 Score=61.93 Aligned_cols=69 Identities=19% Similarity=0.155 Sum_probs=42.2
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCC------hH-HHHHHHHHhhhcCCCCEEEec
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQH------SL-ETITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~------s~-evl~ll~~lk~~~P~~v~llr 769 (999)
+++++||+|....... +++.+... ..+ -+|++||+++.+.. .. +...+|-.+.... -++.+.
T Consensus 121 ~f~~igD~~~~~~~~~-~l~~~~~~~~~~D------~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~ 191 (424)
T 2qfp_A 121 TFGLIGDLGQSFDSNT-TLSHYELSPKKGQ------TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTA 191 (424)
T ss_dssp EEEEECSCTTBHHHHH-HHHHHHTCSSCCC------EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECC
T ss_pred EEEEEEeCCCCCChHH-HHHHHHhCCCCCC------EEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeec
Confidence 4899999998875442 34433211 111 57889999986432 11 2233444444333 499999
Q ss_pred CCccccc
Q 001895 770 GNHEAAD 776 (999)
Q Consensus 770 GNHE~~~ 776 (999)
||||...
T Consensus 192 GNHD~~~ 198 (424)
T 2qfp_A 192 GNHEIEF 198 (424)
T ss_dssp CHHHHCC
T ss_pred CCccccc
Confidence 9999863
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.96 E-value=11 Score=45.58 Aligned_cols=113 Identities=12% Similarity=0.048 Sum_probs=65.3
Q ss_pred eEEEEECCCCc--EEEecCCCCCCC-----CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..+++ |+.-........ .....+.++.+++||+... ...++.||..+....|+.-.....
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~~ 153 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRADH 153 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSCT
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCCC
Confidence 68999998765 886433210000 0112234566788887653 257999999887777987642011
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
........+.++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 154 ~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 154 KRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 111122223345666 67664322111234579999999987789864
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=93.95 E-value=3 Score=49.91 Aligned_cols=113 Identities=8% Similarity=0.040 Sum_probs=63.0
Q ss_pred eEEEEEC-CCCc--EEEecCCCCC--CCC---CcCcEEEE--eCCE----EEEEcccCCCCCCcCcEEEEecCCCCCceE
Q 001895 151 DVHCYDV-LTNK--WSRITPFGEP--PTP---RAAHVATA--VGTM----VVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (999)
Q Consensus 151 dv~~yD~-~t~~--W~~l~~~g~~--P~p---R~~hsa~~--~g~~----iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~ 216 (999)
.+++||. .+.+ |+.-...... +.. ....+.++ .+++ ||+... ...++.+|..+....|+
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAALNAETGETVWK 146 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEEECCCCCEEEe
Confidence 6899999 7764 8875432100 000 11223444 5666 776533 24799999988777798
Q ss_pred EEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 217 ~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
.-... ..+......+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 147 ~~~~~-~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 147 VENSD-IKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EECCC-GGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCC-CCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 64311 0000111223345565 676643221111245799999999877898753
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=93.71 E-value=11 Score=45.41 Aligned_cols=113 Identities=16% Similarity=0.139 Sum_probs=65.8
Q ss_pred eEEEEECCCCc--EEEecCCCCC-----CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEP-----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~-----P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..+++ |+.-...... .......+.++.+++||+... ...++.||..+....|+.-... .
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~-~ 148 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD-P 148 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-T
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-C
Confidence 68899988765 8864332100 000112334566788887643 2579999999877789875411 1
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 149 ~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 149 AKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 111122233345565 676643321112345799999999888898753
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=93.55 E-value=7.1 Score=43.77 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=86.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
+.+.+||..+.+-...-.. ....-.+...++.+++.|+.+ ..+.+||+.+.. -...- .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSD------STVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETT------SCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCc--EEEEE-----cCCCC
Confidence 3788899887764433221 111223344466777777643 579999998753 22211 11122
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
.-..+.+.+ .+++.|+.++ .+..||+.+...........+. .....++.. ++..++.|+.++ .
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~-~~~~l~s~~~dg------~ 277 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRRVLVGH----RAAVNVVDF-DDKYIVSASGDR------T 277 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEEEECCC----SSCEEEEEE-ETTEEEEEETTS------E
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeeeEecCC----CCcEEEEEe-CCCEEEEEeCCC------e
Confidence 223334455 4777777765 5788888765211111111111 112223333 555666666543 2
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
+..++..+. .-..... + ... ...++..++.+++.|+.+ +.|.+||+.+++-
T Consensus 278 i~vwd~~~~-~~~~~~~-~---~~~-~v~~~~~~~~~l~~g~~d---------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 278 IKVWNTSTC-EFVRTLN-G---HKR-GIACLQYRDRLVVSGSSD---------NTIRLWDIECGAC 328 (435)
T ss_dssp EEEEETTTC-CEEEEEE-C---CSS-CEEEEEEETTEEEEEETT---------SCEEEEETTTCCE
T ss_pred EEEEECCcC-cEEEEEc-C---CCC-cEEEEEeCCCEEEEEeCC---------CeEEEEECCCCCE
Confidence 344444332 1111111 1 111 122333456677777753 3488999988753
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.55 E-value=8.4 Score=42.59 Aligned_cols=190 Identities=14% Similarity=0.096 Sum_probs=90.3
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
....+.+||+.+.+....-.. ....-.....++.+++.|+.+ ..+.+||+......-..+. + ..
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--~---~~ 217 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAG-----HQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQ--G---HS 217 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECC-----CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--C---CS
T ss_pred CCCeEEEEECcCCeEEEEecC-----CCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEc--C---CC
Confidence 345788899887764433221 111222333355566666642 5789999985321122221 1 11
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
..-.+++...++.+++.|+.++ .+..||+.+....+...... . .....+..-.+..+++.||...+
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~-~----~v~~~~~~p~~~~ll~~~~gs~d---- 283 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTNHN-A----AVKAVAWCPWQSNLLATGGGTMD---- 283 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECCCS-S----CCCEEEECTTSTTEEEEECCTTT----
T ss_pred CCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecCCc-c----eEEEEEECCCCCCEEEEecCCCC----
Confidence 1122333333446777888765 68889998763333322111 1 11122222224567777652211
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..+..++..+. ........ ...-.++++. ++ .|++.+|.. .+.|.+||..+.....+..+
T Consensus 284 ~~i~i~d~~~~-~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 284 KQIHFWNAATG-ARVNTVDA-----GSQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp CEEEEEETTTC-CEEEEEEC-----SSCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEECCCC-CEEEEEeC-----CCcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEe
Confidence 23445554433 22222111 1112233332 33 455544432 24588999988877765443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=93.17 E-value=6.5 Score=41.77 Aligned_cols=187 Identities=10% Similarity=0.054 Sum_probs=91.5
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
..+.+..||+.+++.......+ .....++.. ++.+|+.+.. .+.+++||+.+....-..+. .+..|
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~~ 85 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLG-----YDFVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQ-EGQSS 85 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECC-----CCEEEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEE-ECSSC
T ss_pred CCCeEEEEeCcccceeeeEEcc-----CCcceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecc-cCCCC
Confidence 3458999999999887665432 111133332 3357776652 24899999988642122222 22222
Q ss_pred CCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCC
Q 001895 226 GPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDAS 303 (999)
Q Consensus 226 ~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~LyvfGG~~~~ 303 (999)
.++++.. ++.+|| .+..++ ....+++||+.+. +....-.... ..+..+...++ .+|+.+..+..
T Consensus 86 ----~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 86 ----MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIPY-----DAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp ----CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECCT-----TEEEEEECTTSSCEEEEEETTTT
T ss_pred ----ccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECCC-----CccceEECCCCCEEEEEecCCCc
Confidence 2323333 333566 332221 1237999999887 5544333322 12333334455 47766543221
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.++.|+...++...... ....+....-..+++. ++ .+|+.+.. .+.|.+||+.+.+.
T Consensus 152 -----~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 152 -----TVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp -----EEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred -----eEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 03333333333222111 0000112222334443 34 57776532 35699999988775
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=93.16 E-value=4.5 Score=44.97 Aligned_cols=194 Identities=10% Similarity=-0.021 Sum_probs=94.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+|.+|+.+..+..+.... ....-++++.. ++.+++.++.+ ..+++||+.+.. .......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~--~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFK---TGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQ--TVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEEE---CSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCC--EEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEEc---CCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCe--EeeecCcccccccCC
Confidence 7888888777665554321 11112233333 56788777642 469999998753 433221101111111
Q ss_pred c-cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 230 G-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 230 ~-h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
. .+++.-.++.+|+.|+.++ .+.+||+.+....++.. .... .....+..-.+..+|+.++.++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~-----~v~~~d~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~l~~~~~~~~------ 234 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQAN-----AVHVFDLKTLAYKATVD-LTGK----WSKILLYDPIRDLVYCSNWISE------ 234 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT-----EEEEEETTTCCEEEEEE-CSSS----SEEEEEEETTTTEEEEEETTTT------
T ss_pred ceeEEEEcCCCEEEEEECCCC-----EEEEEECCCceEEEEEc-CCCC----CeeEEEEcCCCCEEEEEecCCC------
Confidence 1 2233333447888877554 68999998763333332 1111 1112222222456666665432
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
.++.++..+. +..+... ....-.++++. +++.+++++...... ......|++||+.+.+-...
T Consensus 235 ~i~~~d~~~~-~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 235 DISVIDRKTK-LEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp EEEEEETTTT-EEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEEE
T ss_pred cEEEEECCCC-cEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEee
Confidence 4566665543 3332211 11122334443 454444544322211 00135799999998865443
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=93.10 E-value=13 Score=41.45 Aligned_cols=180 Identities=11% Similarity=0.043 Sum_probs=88.2
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
....+..||+.+.+-...-.. ....-.+...++..++.|+.+ ..+.+||+.+.. .+.. +...
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~----~~~~---~~~~ 278 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETET----CLHT---LQGH 278 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTE----EEEE---ECCC
T ss_pred CCCEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcCC------CEEEEEECCCCc----EeEE---ecCC
Confidence 345677788776653322111 111222333455566666642 568999987742 2221 1111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
...-..+.+++ ..++.|+.++ .+..||+.+....++.... .....+... ++.+++.|+.++
T Consensus 279 ~~~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~-~~~~l~~~~~dg----- 339 (445)
T 2ovr_B 279 TNRVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLTGH-------QSLTSGMEL-KDNILVSGNADS----- 339 (445)
T ss_dssp SSCEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEECCC-------CSCEEEEEE-ETTEEEEEETTS-----
T ss_pred CCceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEEcCC-------cccEEEEEE-eCCEEEEEeCCC-----
Confidence 12222333455 5667777665 5888999877323322111 111222333 445666676543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.+..++..+. +-........ .....-.++..++.+++.|+.+ ..|.+||+.+++...
T Consensus 340 -~i~vwd~~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 340 -TVKIWDIKTG-QCLQTLQGPN--KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp -CEEEEETTTC-CEEEEECSTT--SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred -eEEEEECCCC-cEEEEEccCC--CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 2344444332 2222221111 1112223344467777777753 358899999887654
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=93.10 E-value=0.094 Score=60.18 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=40.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHhC-CC-CCCCCccceeEEEeccccCCCCC-----h-HH-HHHHHHHhhhcCCCCEEEec
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYG-SP-STAGDIAYIDYLFLGDYVDRGQH-----S-LE-TITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g-~~-~~~~~~~~~~~vfLGDyVDRG~~-----s-~e-vl~ll~~lk~~~P~~v~llr 769 (999)
+++++||+|..... .+.++.+. .+ ..+ -+|++||+++.+.. . .+ ...+|-.+.... -++.+.
T Consensus 128 ~f~~~gD~~~~~~~-~~~l~~i~~~~~~~D------~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~ 198 (426)
T 1xzw_A 128 VFGLIGDIGQTHDS-NTTLTHYEQNSAKGQ------AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTA 198 (426)
T ss_dssp EEEEECSCTTBHHH-HHHHHHHHHCTTCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCC
T ss_pred EEEEEEeCCCCCch-HHHHHHHHhCCCCCC------EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEec
Confidence 48899999987532 22233221 11 111 58889999975322 1 11 233444444333 499999
Q ss_pred CCccccc
Q 001895 770 GNHEAAD 776 (999)
Q Consensus 770 GNHE~~~ 776 (999)
||||...
T Consensus 199 GNHD~~~ 205 (426)
T 1xzw_A 199 GNHEIDY 205 (426)
T ss_dssp CGGGCCC
T ss_pred ccccccc
Confidence 9999864
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=93.05 E-value=5.8 Score=42.19 Aligned_cols=156 Identities=14% Similarity=0.049 Sum_probs=95.6
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~ 257 (999)
++....++.||+..|.. ..+.++|+.+....-+. ++..-++.+++..++ +||+....+ +.++
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~------l~~~~FgeGit~~g~-~Ly~ltw~~-----~~v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME------RLGNIFAEGLASDGE-RLYQLTWTE-----GLLF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE------ECTTCCEEEEEECSS-CEEEEESSS-----CEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE------CCCCcceeEEEEeCC-EEEEEEccC-----CEEE
Confidence 45666688999999863 23899999986422222 233445666777776 899986543 5899
Q ss_pred EEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-c
Q 001895 258 ALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (999)
Q Consensus 258 ~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R-~ 335 (999)
+||+.+. +-.. ++..+ ...+++..+++||+.-| .+.++.+|+.+...-.-+.+... +.+. .
T Consensus 120 V~D~~Tl--~~~~ti~~~~-------eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~-g~~v~~ 182 (268)
T 3nok_A 120 TWSGMPP--QRERTTRYSG-------EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR-GQPVEL 182 (268)
T ss_dssp EEETTTT--EEEEEEECSS-------CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEECCcC--cEEEEEeCCC-------ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC-Cccccc
Confidence 9999887 3322 22211 12344456788999754 23577788776644444444321 1221 1
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
-.-+...+++||+-- ...++|.+.|+++++-..
T Consensus 183 lNeLe~~dG~lyanv---------w~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 183 INELECANGVIYANI---------WHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEEEEEETTEEEEEE---------TTCSEEEEECTTTCBEEE
T ss_pred ccccEEeCCEEEEEE---------CCCCeEEEEeCCCCcEEE
Confidence 123455688988631 125789999999996443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=92.91 E-value=11 Score=40.05 Aligned_cols=193 Identities=10% Similarity=0.023 Sum_probs=96.4
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.++.+|+.+.+.......+. ..++.+.. ++.+|+.++. .+.+++||+.+....+. +.. +....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~-~~~-~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL-----KPFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGR-LVL-DDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-----CCCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEE-EES-CCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCC-----CcceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEE-Eec-CCCcc
Confidence 4579999999887544433221 12333433 3467777653 24799999988642222 221 11111
Q ss_pred -----CCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 227 -----PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 227 -----~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
+..-+.+++. +++++|+.+..+ -..+++||+.+....+.. ...+.. ....+..-.++.+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~----~~~~~~s~dg~~l~~~~~- 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM----STGLALDSEGKRLYTTNA- 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT----CCCCEEETTTTEEEEECT-
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc----cceEEECCCCCEEEEEcC-
Confidence 1112334443 334677776322 246999999887333332 212211 122222223455666532
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
...++.++..+. +-.+....+.........++++. ++.+|+.... .+.|++||+.+.+....
T Consensus 205 ------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 205 ------DGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILAK 268 (353)
T ss_dssp ------TSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEEE
T ss_pred ------CCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEEE
Confidence 134566666543 33333322211112222334444 4567776532 35699999998876544
Q ss_pred cc
Q 001895 379 KS 380 (999)
Q Consensus 379 ~~ 380 (999)
-.
T Consensus 269 ~~ 270 (353)
T 3vgz_A 269 VA 270 (353)
T ss_dssp EE
T ss_pred EE
Confidence 33
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=92.62 E-value=4 Score=46.01 Aligned_cols=191 Identities=10% Similarity=0.105 Sum_probs=99.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..++++|+.+++...+.... ....+.+.. ++ .|++.+... ....+|++|+.+.. ...+. .. .
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-----~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~--~~~l~---~~--~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-----RHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQ--IRQVT---DG--R 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-----SCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCC--EEECC---CC--S
T ss_pred cEEEEEECCCCcEEEeecCC-----CcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCC--EEeCc---CC--C
Confidence 48999999998887765431 111222222 33 555554432 12479999998753 44443 11 1
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
......+...+++.+++++..+ ....+|.+|+.+. +-..+.... ..........+++.+++++.+.. .
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g---~ 334 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGG--APQRITWEG-----SQNQDADVSSDGKFMVMVSSNGG---Q 334 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSS--CCEECCCSS-----SEEEEEEECTTSSEEEEEEECSS---C
T ss_pred CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCC--CEEEEecCC-----CcccCeEECCCCCEEEEEECcCC---c
Confidence 1112223333334444444322 1347999999887 444443221 12222333446666666665432 3
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..++.++..+. .. ...... . ...+.++. +++++++++.... ...|+++|+.......+...
T Consensus 335 ~~i~~~d~~~~-~~--~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 335 QHIAKQDLATG-GV--QVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EEEEEEETTTC-CE--EECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCCS
T ss_pred eEEEEEECCCC-CE--EEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeCC
Confidence 45666766544 33 233221 1 22233333 5677777664332 23699999998887776543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=92.50 E-value=4.3 Score=43.06 Aligned_cols=151 Identities=13% Similarity=0.132 Sum_probs=83.0
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+++++.|.. ...++++|..+.+..|+.-. ......|.+.+..++.+|+.+ -+.++.||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 567777653 26899999977655687653 111234555566555777732 245999999 66
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC-CCCCcceeEEEEEC
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRYQHAAVFVN 343 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~-~P~~R~~hsav~~~ 343 (999)
...|+.-.... ...+.+....++.+++....+ ...++.++....-.|++...... .+...........+
T Consensus 66 ~~~W~~~~~~~-----~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPAG-----CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCTT-----CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCCC-----ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 66888654211 123344455677777764431 23466676543334555433221 01111122233446
Q ss_pred CEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
+.++|.... ...|.+||++ ++
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~-G~ 156 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPN-GQ 156 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTT-SC
T ss_pred CCEEEEecC---------CCEEEEECCC-CC
Confidence 666665432 3458999997 53
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=92.07 E-value=16 Score=40.00 Aligned_cols=94 Identities=11% Similarity=0.077 Sum_probs=49.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||+.+..-...... ....-.+++.. ++.+++.|+.+ ..+.+||+.+... -..+. + ...
T Consensus 119 g~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~-~~~~~--~---h~~ 182 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSN-PRTLI--G---HRA 182 (420)
T ss_dssp SCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCC-CEEEE--C---CSS
T ss_pred CCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcC-ceEEc--C---CCC
Confidence 3678888887765444211 11111222222 34566666642 4799999987531 12221 0 111
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred cEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 122334444445677777765 5788898876
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.91 E-value=5 Score=43.22 Aligned_cols=196 Identities=10% Similarity=0.117 Sum_probs=97.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+||+.+.+|..+.... .....-..+.+ . +.+++.|+.+ ..+.+||+.+.. ........+ .
T Consensus 80 ~v~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~-~~~~~~~~~---~ 146 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENG-TTSPIIIDA---H 146 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTS-CCCEEEEEC---C
T ss_pred EEEEEEcCCCceeEeeeec---CCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCC-ceeeEEecC---C
Confidence 6888999999887765542 11112222222 2 4566666642 578899988752 122211111 1
Q ss_pred CCcccEEEEEC-------------CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC--
Q 001895 227 PRYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-- 291 (999)
Q Consensus 227 ~R~~h~~~v~~-------------~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-- 291 (999)
...-.+++... ++.+++.|+.++ .+..||+.+....|..+....... ......+...+
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVL 219 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCS
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEeccc--CcEeEEEECCCCC
Confidence 11112222222 236778888776 577788765543565553322110 11122223334
Q ss_pred -CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 292 -GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 292 -~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
+.+++.|+.++. ..+|.+..... .+........ .....-.++++. ++.++++|+.++ .|.+||
T Consensus 220 ~~~~l~s~~~dg~----i~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg---------~i~iw~ 284 (379)
T 3jrp_A 220 LRSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWK 284 (379)
T ss_dssp SSEEEEEEETTSC----EEEEEESSTTS-CCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS---------SEEEEE
T ss_pred CCCeEEEEeCCCE----EEEEeCCCCCc-cceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC---------cEEEEe
Confidence 788888887653 23444433221 2222222211 122222333333 567777776532 377777
Q ss_pred CC-CCeEEEcccC
Q 001895 370 TA-AGVWCDTKSV 381 (999)
Q Consensus 370 ~~-t~~W~~v~~~ 381 (999)
+. ...|..+...
T Consensus 285 ~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 285 ENLEGKWEPAGEV 297 (379)
T ss_dssp EEETTEEEEEEEE
T ss_pred CCCCCccccccce
Confidence 76 5688887665
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=91.69 E-value=4.9 Score=44.56 Aligned_cols=183 Identities=14% Similarity=0.131 Sum_probs=91.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+++||..+++........ ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. ....- ....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~--~~~~~-----~~~~ 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQT--KLRTM-----AGHQ 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCC--EEEEE-----CCCS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCe--EEEEe-----cCCC
Confidence 37899999988876664431 11111222222 44566666642 478999998753 22221 1112
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
..-..+.+++ .+++.|+.++ .+..||+......-..+..... .........++.+++.|+.++.
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~----- 240 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGHSS-----EVCGLAWRSDGLQLASGGNDNV----- 240 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSC-----
T ss_pred CceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCCCC-----CeeEEEEcCCCCEEEEEeCCCe-----
Confidence 2223333444 4777777665 6888998743112222221111 1122223336777888876542
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+..++..+. .-...... ....-.++++. +..+++.||-.. ...|.+||+.+.+-..
T Consensus 241 -v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 241 -VQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARVN 298 (401)
T ss_dssp -EEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEEE
T ss_pred -EEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEEE
Confidence 344444332 21222211 11112333443 456777775211 3458999998876543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.59 E-value=16 Score=38.97 Aligned_cols=95 Identities=9% Similarity=0.162 Sum_probs=51.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+||+....+..+.... .....-..+.+ . +.+++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~--~~~~~~~~---~~ 99 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 99 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCC--ceeEeeee---cC
Confidence 5777888766666654331 11111222233 2 4666666642 46899999885 46665532 21
Q ss_pred CCcc-cEEEEECC--cEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 227 PRYG-HVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 227 ~R~~-h~~~v~~~--~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.... .+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 2222 22333332 35777777665 6778888665
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=91.26 E-value=13 Score=39.97 Aligned_cols=96 Identities=5% Similarity=-0.044 Sum_probs=49.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+|.+|..+++++.+........ -..++.. ++++|+.+..+ ....+++||+.+. ++..+.... .....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~---p~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g--~~~~~~~~~--~~~~~ 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQN---PTYLALSAKDCLYSVDKED----DEGGIAAWQIDGQ--TAHKLNTVV--APGTP 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSC---CCCEEECTTCEEEEEEEET----TEEEEEEEEEETT--EEEEEEEEE--EESCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCC---cceEEEccCCeEEEEEecC----CCceEEEEEecCC--cEEEeeeee--cCCCC
Confidence 57888888888877543211111 1223333 45776665321 1357999999764 355544210 01111
Q ss_pred ccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECC
Q 001895 230 GHVMALVG-QRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 230 ~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
-..+++-. +.+||+.+..+ ..+..||+.
T Consensus 88 p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~ 116 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK-----GTAEVMKIA 116 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT-----TEEEEEEEC
T ss_pred CEEEEECCCCCEEEEEeCCC-----CEEEEEEeC
Confidence 22334443 33566665322 357777774
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=91.21 E-value=7.8 Score=40.81 Aligned_cols=151 Identities=15% Similarity=0.057 Sum_probs=74.4
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc-ccEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~-~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
++..++.|+.+ ..+.+||+.+.. +...... ..... -.+++...++.+++.|+.++ .+..||+.
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~--~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~ 171 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPT--PRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLH 171 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC----EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCC--cceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCC
Confidence 34556666542 579999998753 3222211 11111 12333343445777777665 58899998
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE
Q 001895 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~ 342 (999)
+. +....-.... ..........++.+++.|+.++ .+..++.... +-..... ....-.++++.
T Consensus 172 ~~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~-~~~~~~~-----~~~~v~~~~~s 233 (337)
T 1gxr_A 172 NQ--TLVRQFQGHT----DGASCIDISNDGTKLWTGGLDN------TVRSWDLREG-RQLQQHD-----FTSQIFSLGYC 233 (337)
T ss_dssp TT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEEC
T ss_pred CC--ceeeeeeccc----CceEEEEECCCCCEEEEEecCC------cEEEEECCCC-ceEeeec-----CCCceEEEEEC
Confidence 87 4333221111 1122222333666777777543 3445555433 2121111 11112233332
Q ss_pred -CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
++.++++|+.+ ..+.+||+.+.+-..
T Consensus 234 ~~~~~l~~~~~~---------~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 234 PTGEWLAVGMES---------SNVEVLHVNKPDKYQ 260 (337)
T ss_dssp TTSSEEEEEETT---------SCEEEEETTSSCEEE
T ss_pred CCCCEEEEEcCC---------CcEEEEECCCCCeEE
Confidence 56677777642 348899998876433
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=91.06 E-value=10 Score=45.03 Aligned_cols=111 Identities=16% Similarity=0.261 Sum_probs=61.9
Q ss_pred eEEEEECCCCc--EEEecCCCCCCCC---CcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPTP---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~p---R~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.+++||..+.+ |+.-........+ ....+.++.+++||+... ...++.+|..+....|+.-.. .+
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~~---~~ 148 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKFA---DH 148 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEECS---CG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecCC---CC
Confidence 48899998765 8875433110001 112344567888887532 257999999987778986531 11
Q ss_pred CCCc--ccEEEEECC----cEEEEEccCCC-CCCCCeEEEEECCCCCceEEEc
Q 001895 226 GPRY--GHVMALVGQ----RYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 226 ~~R~--~h~~~v~~~----~~Lyv~GG~~g-~~~~ndv~~yDl~s~~~~W~~v 271 (999)
...+ ..+-++.++ ..++++|...+ ...-..++.||..+....|+.-
T Consensus 149 ~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 1111 112223332 11344443211 1124579999999988889763
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=90.75 E-value=19 Score=38.07 Aligned_cols=187 Identities=13% Similarity=0.053 Sum_probs=90.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC-CCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~-~P~~ 227 (999)
+.+++||+.+.....+... .+ -.+.+.. ++.+|+..+ +.+++||+.+. +++.+..... .+..
T Consensus 35 ~~i~~~d~~~~~~~~~~~~-----~~-~~~i~~~~dG~l~v~~~--------~~l~~~d~~~g--~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMD-----AP-VSSVALRQSGGYVATIG--------TKFCALNWKEQ--SAVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEECS-----SC-EEEEEEBTTSSEEEEET--------TEEEEEETTTT--EEEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEeCC-----Cc-eEEEEECCCCCEEEEEC--------CeEEEEECCCC--cEEEEEecCCCCCCC
Confidence 4789999998876554321 11 1223333 345555431 47999999875 4666543211 1222
Q ss_pred CcccEEEEECCcEEEEEccCCC------CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eC-CEEEEEec
Q 001895 228 RYGHVMALVGQRYLMAIGGNDG------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SD-GLLLLCGG 299 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~-~~LyvfGG 299 (999)
|.. .+++-.++.||+..-... ......+|++|.... ...+..... .....++ .+ +.||+...
T Consensus 99 ~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~------~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 99 RFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD------ISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp EEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES------BEEEEEECTTSCEEEEEEG
T ss_pred CCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc------cccceEEcCCCCEEEEecC
Confidence 222 233344446776421111 112457899988532 333221111 1112222 23 46777654
Q ss_pred cCCCCCCcccEEEEecC-CCCeEE----EEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCC
Q 001895 300 RDASSVPLASAYGLAKH-RDGRWE----WAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (999)
Q Consensus 300 ~~~~~~~~~d~~~~~~~-~~~~W~----w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~ 373 (999)
. ...++.|+.. .++... +..... ....-.++++- +++|||..-. ...|.+||++++
T Consensus 169 ~------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG 230 (297)
T 3g4e_A 169 L------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTG 230 (297)
T ss_dssp G------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTC
T ss_pred C------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCc
Confidence 2 2345666542 333332 111111 11111233332 5788887421 235999999988
Q ss_pred eEEEccc
Q 001895 374 VWCDTKS 380 (999)
Q Consensus 374 ~W~~v~~ 380 (999)
+....-.
T Consensus 231 ~~~~~i~ 237 (297)
T 3g4e_A 231 KRLQTVK 237 (297)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 7654433
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.70 E-value=20 Score=38.35 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=90.5
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
...+.++|+.+.+-...-... +. .-.+++.. ++..++.|+. ...+.+||+.+....+. +. ...
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~-~~-----~~~ 164 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAG--PV--DAWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYS-LD-----TRG 164 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECC--TT--CCCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEE-EE-----CSS
T ss_pred CCcEEEEECCCCCEEEEEeCC--Cc--cEEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEE-ec-----CCC
Confidence 347888999887644332211 11 11223332 4466666664 25688999987542222 21 111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
..-.+++...++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 165 ~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h~----~~v~~l~~spd~~~l~s~s~dg~---- 229 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGHA----MPIRSLTFSPDSQLLVTASDDGY---- 229 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCCCEEEECTTSCEEEEECTTSC----
T ss_pred ceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEcccC----CceeEEEEcCCCCEEEEEcCCCe----
Confidence 2223344444456777888775 5888999877 3322111111 01122233346778888876543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+..++.... ..... ..+ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-.
T Consensus 230 --i~iwd~~~~-~~~~~-~~~---h~~~v~~~~~sp~~~~l~s~s~D~---------~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 230 --IKIYDVQHA-NLAGT-LSG---HASWVLNVAFCPDDTHFVSSSSDK---------SVKVWDVGTRTCV 283 (321)
T ss_dssp --EEEEETTTC-CEEEE-ECC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEEE
T ss_pred --EEEEECCCc-ceeEE-EcC---CCCceEEEEECCCCCEEEEEeCCC---------cEEEEeCCCCEEE
Confidence 333443322 11111 111 11112233333 567777777533 4888999887543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=90.68 E-value=18 Score=38.95 Aligned_cols=98 Identities=7% Similarity=0.064 Sum_probs=49.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+|.+|..+.+++.+... ....| ..++.. +..||+.+..+. ....+.+|++...+.+...+..... ...
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p---~~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~--~~~ 100 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANP---SYLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKT--MGA 100 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCC---CSEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEEC--SSS
T ss_pred EEEEEeCCCCCEEEeecc-cCCCC---ceEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEecc--CCC
Confidence 466778888888776543 11111 122322 335666654311 1246766666554334655542210 112
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
.-+.++. +++.||+.+..+ ..+.+|++.+
T Consensus 101 ~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 101 DPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp CEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred CcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 2223333 665677765433 3678888764
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=90.33 E-value=6.1 Score=42.04 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=52.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC-
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG- 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~- 226 (999)
+.++++|+.+++.......+ .....+..+.. ++.+|+.+.. ...+++||+.+.. ....-..+..+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~--~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK--NTFHANLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc--EEEEEEccccccc
Confidence 48999999998765443332 10012344443 3367777642 2579999998753 322221111111
Q ss_pred -CCcccEEEEEC-CcEEEEEccC---CCCC---CCCeEEEEECCCC
Q 001895 227 -PRYGHVMALVG-QRYLMAIGGN---DGKR---PLADVWALDTAAK 264 (999)
Q Consensus 227 -~R~~h~~~v~~-~~~Lyv~GG~---~g~~---~~ndv~~yDl~s~ 264 (999)
...-+.++.-. +.+||+.+.. .... ..+.+++||+.+.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 11223444443 3355554421 0000 1257999998763
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=90.32 E-value=34 Score=40.35 Aligned_cols=81 Identities=11% Similarity=0.034 Sum_probs=45.9
Q ss_pred CEEEEEcccC---------CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE----CCc--EEEEEccCCC
Q 001895 185 TMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIGGNDG 249 (999)
Q Consensus 185 ~~iyv~GG~~---------~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~----~~~--~Lyv~GG~~g 249 (999)
+.||+..|.. .+..+...++.+|..+...+|+.-....+...-......+++ ++. ++++++..++
T Consensus 247 g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G 326 (571)
T 2ad6_A 247 NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG 326 (571)
T ss_dssp TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS
T ss_pred CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc
Confidence 5777765531 122234579999999877789875422111111111111222 332 3666665544
Q ss_pred CCCCCeEEEEECCCCCceEEE
Q 001895 250 KRPLADVWALDTAAKPYEWRK 270 (999)
Q Consensus 250 ~~~~ndv~~yDl~s~~~~W~~ 270 (999)
.++++|..+....|..
T Consensus 327 -----~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 327 -----ILYTLNRENGNLIVAE 342 (571)
T ss_dssp -----EEEEEETTTCCEEEEE
T ss_pred -----EEEEEECCCCCEEeee
Confidence 6899999888777875
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=89.96 E-value=17 Score=39.03 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=83.9
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEee-cCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV-QGPGPGP 227 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~-~g~~P~~ 227 (999)
.+.++|..+..-...... ....-..+.+ ++.+++.||.+ ..+.+||+.+.......... .+. ..
T Consensus 78 ~v~iWd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h--~~ 144 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGH--TG 144 (340)
T ss_dssp EEEEEETTTCCEEEEEEC-----SSSCEEEEEECTTSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECC--SS
T ss_pred cEEEEECCCCCcceEeec-----CCccEEEEEECCCCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCC--Cc
Confidence 678888877653322111 1111122222 34666677642 56888998764322222211 110 11
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
.-.++....++. ++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 145 -~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~d~~---- 207 (340)
T 1got_B 145 -YLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTGHT----GDVMSLSLAPDTRLFVSGACDAS---- 207 (340)
T ss_dssp -CEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC----
T ss_pred -cEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcCCC----CceEEEEECCCCCEEEEEeCCCc----
Confidence 111222333434 55566554 5788999877 4332211111 11122223346778888886643
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
+..++..+. .-.... .+ ....-.++++. ++.+++.|+.+ ..|.+||+.+.+-
T Consensus 208 --v~~wd~~~~-~~~~~~-~~---h~~~v~~v~~~p~~~~l~s~s~d---------~~v~iwd~~~~~~ 260 (340)
T 1got_B 208 --AKLWDVREG-MCRQTF-TG---HESDINAICFFPNGNAFATGSDD---------ATCRLFDLRADQE 260 (340)
T ss_dssp --EEEEETTTC-SEEEEE-CC---CSSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTEE
T ss_pred --EEEEECCCC-eeEEEE-cC---CcCCEEEEEEcCCCCEEEEEcCC---------CcEEEEECCCCcE
Confidence 233333322 111111 11 11112233333 56778888753 3488899988754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=89.95 E-value=28 Score=38.80 Aligned_cols=173 Identities=13% Similarity=0.100 Sum_probs=85.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~ 230 (999)
.+.+||+.+.+-...-.. ....-.+....+.+++.|+.+ ..+.+||+.+.. -...- ......
T Consensus 140 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~--~~~~~-----~~h~~~ 201 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVG-----HTGGVWSSQMRDNIIISGSTD------RTLKVWNAETGE--CIHTL-----YGHTST 201 (445)
T ss_dssp CEEEEETTTCCEEEECCC-----CSSCEEEEEEETTEEEEEETT------SCEEEEETTTTE--EEEEE-----CCCSSC
T ss_pred cEEEEECCCCcEEEEEcC-----CCCCEEEEEecCCEEEEEeCC------CeEEEEECCcCc--EEEEE-----CCCCCc
Confidence 688899887754332211 111112223334456666642 579999998752 21111 111112
Q ss_pred cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001895 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (999)
Q Consensus 231 h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~ 310 (999)
-.+..+.+ ..++.|+.++ .+..||+.+....+...... ....++.. ++..++.|+.++. +
T Consensus 202 v~~~~~~~-~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~-------~~v~~~~~-~~~~l~~~~~dg~------i 261 (445)
T 2ovr_B 202 VRCMHLHE-KRVVSGSRDA-----TLRVWDIETGQCLHVLMGHV-------AAVRCVQY-DGRRVVSGAYDFM------V 261 (445)
T ss_dssp EEEEEEET-TEEEEEETTS-----EEEEEESSSCCEEEEEECCS-------SCEEEEEE-CSSCEEEEETTSC------E
T ss_pred EEEEEecC-CEEEEEeCCC-----EEEEEECCCCcEEEEEcCCc-------ccEEEEEE-CCCEEEEEcCCCE------E
Confidence 22333344 3567777664 68889998763233322111 11222333 6777777776542 3
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
..++..+. .-..... + .... -.++..++..++.|+.+ ..|.+||+.+.+-.
T Consensus 262 ~iwd~~~~-~~~~~~~-~---~~~~-v~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 262 KVWDPETE-TCLHTLQ-G---HTNR-VYSLQFDGIHVVSGSLD---------TSIRVWDVETGNCI 312 (445)
T ss_dssp EEEEGGGT-EEEEEEC-C---CSSC-EEEEEECSSEEEEEETT---------SCEEEEETTTCCEE
T ss_pred EEEECCCC-cEeEEec-C---CCCc-eEEEEECCCEEEEEeCC---------CeEEEEECCCCCEE
Confidence 34444332 2222211 1 1111 22333377777777753 34889999887643
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=89.59 E-value=12 Score=40.15 Aligned_cols=134 Identities=16% Similarity=0.217 Sum_probs=64.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+.+||+.+.+|..+..... ....-.+++.. ++.+++.|+.+ ..+.+||+.+. ++...... .....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~--~~~~~~~~--~~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGR--TWKPTLVI--LRINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETT--EEEEEEEC--CCCSS
T ss_pred CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCC--eeeeeEEe--ecCCC
Confidence 378899999987666544310 11111222223 34566666542 46899999774 35444311 11122
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.-.+++...++.+++.|+.++ .+..||+.+.. .|........ +............++.+++.|+.++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQEN-DWWVCKHIKK-PIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTT-TEEEEEEECT-TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCC-cceeeeeeec-ccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 223333334445777777654 35566665542 2322211111 0011122222333667777777654
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=89.58 E-value=22 Score=37.13 Aligned_cols=104 Identities=10% Similarity=0.021 Sum_probs=54.5
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-C-CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEE-eecCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV-VVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g-~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v-~~~g~~P 225 (999)
.+.+++||+.++++..+...........-++++.. + +.+|+.... +.+++||.. .+ ...+ .......
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~--~~~~~~~~~~~~ 114 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GT--FEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SC--EEECCSBCTTSC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CC--EEEEEeccCCCc
Confidence 34789999988888776431000011112334433 3 678887542 368999987 43 5444 2111111
Q ss_pred CCCcccEEEEECCcEEEEEccCCC----------CCCCCeEEEEECC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDG----------KRPLADVWALDTA 262 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g----------~~~~ndv~~yDl~ 262 (999)
....-+.++...++.+|+....++ ......+++||+.
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 112234455555557887654321 1123579999986
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.55 E-value=5.5 Score=48.74 Aligned_cols=95 Identities=9% Similarity=0.162 Sum_probs=53.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+||+.+..+..+.... .....-..+.+ . +.+++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 32 ~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~--~~~~~~~~---~~ 97 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 97 (753)
T ss_dssp EEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCC--cccccccc---cC
Confidence 6788888877777665431 11122222332 2 5666677642 56999999885 46665532 22
Q ss_pred CCcc-cEEEEECC--cEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 227 PRYG-HVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 227 ~R~~-h~~~v~~~--~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.... .+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 98 h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 98 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 2222 22333332 35778887765 5778887654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=89.45 E-value=5 Score=48.54 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=54.1
Q ss_pred cCeEEEEECCCCcEEEecCCCCCC-C------------CCc-------CcEEEEe-CCEEEEEcccCCCCCCcCcEEEEe
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPP-T------------PRA-------AHVATAV-GTMVVIQGGIGPAGLSAEDLHVLD 207 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P-~------------pR~-------~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD 207 (999)
...++.+|+.+.+...+....... . .|. -.+.+.- +++.++++.. ..++++|
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-------~~i~~~d 135 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-------GELYLYD 135 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-------TEEEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-------CcEEEEE
Confidence 458999999999887775431111 0 000 1122222 4444444442 6899999
Q ss_pred cCCCC-CceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccC
Q 001895 208 LTQQR-PRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (999)
Q Consensus 208 ~~t~t-~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~ 274 (999)
+.+.. .+-..+. .....-...+.-.+++.++++.. ++++.+|+.+. +...+...
T Consensus 136 ~~~~~~~~~~~l~-----~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g--~~~~~~~~ 190 (741)
T 2ecf_A 136 LKQEGKAAVRQLT-----HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASG--RQMQLTAD 190 (741)
T ss_dssp SSSCSTTSCCBCC-----CSSSCEEEEEECTTSSEEEEEET------TEEEEEETTTT--EEEECCCC
T ss_pred CCCCCcceEEEcc-----cCCcccccccCCCCCCEEEEEeC------CcEEEEecCCC--CEEEeccC
Confidence 98740 0122221 11111222333333344444432 37999999888 77766543
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=89.26 E-value=24 Score=37.04 Aligned_cols=180 Identities=12% Similarity=0.129 Sum_probs=86.4
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+.++|..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. .-..+. + ....
T Consensus 46 ~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~-~~~~~~--~---~~~~ 109 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGK-CLKTLK--G---HSNY 109 (312)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred eEEEEeCCCcccchhhcc----CCCceEEEEEcCCCCEEEEECCC------CEEEEEECCCCc-EEEEEc--C---CCCC
Confidence 577788877766554321 11111122222 34666677642 578999998753 111121 1 0111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
-.++....++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 110 v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~------ 172 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTG--KCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGL------ 172 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--EEEEEecCCC----CcEEEEEEcCCCCEEEEEeCCCc------
Confidence 12233333345777787765 5888999876 3222111111 01111222335677777776542
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+..++..+. .......... ... -..+++. ++..++.|+. ...|.+||+.+.+-.
T Consensus 173 i~~wd~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASG-QCLKTLIDDD--NPP-VSFVKFSPNGKYILAATL---------DNTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTC-CEEEEECCSS--CCC-EEEEEECTTSSEEEEEET---------TTEEEEEETTTTEEE
T ss_pred EEEEECCCC-ceeeEEeccC--CCc-eEEEEECCCCCEEEEEcC---------CCeEEEEECCCCcEE
Confidence 334444332 2221211111 111 1122222 5666777764 245889999887643
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=89.13 E-value=28 Score=41.55 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=56.8
Q ss_pred CCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC
Q 001895 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS 332 (999)
Q Consensus 253 ~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~ 332 (999)
...++++|+.+. +-..+..... ............+++.++++..+... ....++.++..+...+........ ..
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTGEP--KEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCCSC--TTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred eeEEEEEECCCC--ceEeeccCCC--CceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CC
Confidence 357999999887 5555432211 11112223333466655555544322 345666676654313332221111 00
Q ss_pred Cc-ceeEEEEE---CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc
Q 001895 333 PR-YQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 333 ~R-~~hsav~~---~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
.. ....+++. ++++++.+..++ ...+|.+|........+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecC
Confidence 00 01122332 677666665432 356999998777777664
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=88.74 E-value=26 Score=36.76 Aligned_cols=180 Identities=13% Similarity=0.123 Sum_probs=85.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+.+||+.+.+-...-.. ....-..+.+ ++.+++.|+.+ ..+.+||+.+.. -...- +..
T Consensus 87 ~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~--~~~~~-----~~~ 148 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGK--CLKTL-----PAH 148 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCC--EEEEE-----CCC
T ss_pred CEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCE--EEEEe-----cCC
Confidence 4788899887653322111 0111112222 34566666642 469999998753 21111 111
Q ss_pred Ccc-cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001895 228 RYG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (999)
Q Consensus 228 R~~-h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~ 306 (999)
... .+++...++.+++.|+.++ .+..||+.+. +....-..... ..........++..++.|+.++
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~---- 214 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDN---- 214 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCSSC---CCEEEEEECTTSSEEEEEETTT----
T ss_pred CCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEeccCC---CceEEEEECCCCCEEEEEcCCC----
Confidence 111 2223333445777787765 5888999876 33221111110 1112222334566677776543
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCccee--EEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQH--AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 307 ~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~h--sav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.+..++..+. .-..... +.. ...... .....++.+++.|+.+ ..|.+||+.+.+=
T Consensus 215 --~i~iwd~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~sg~~d---------g~i~vwd~~~~~~ 271 (312)
T 4ery_A 215 --TLKLWDYSKG-KCLKTYT-GHK-NEKYCIFANFSVTGGKWIVSGSED---------NLVYIWNLQTKEI 271 (312)
T ss_dssp --EEEEEETTTT-EEEEEEC-SSC-CSSSCCCEEEECSSSCEEEECCTT---------SCEEEEETTTCCE
T ss_pred --eEEEEECCCC-cEEEEEE-ecC-CceEEEEEEEEeCCCcEEEEECCC---------CEEEEEECCCchh
Confidence 2344444332 2221111 111 111111 1222357778888753 3488999988753
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=88.12 E-value=21 Score=38.79 Aligned_cols=183 Identities=11% Similarity=-0.020 Sum_probs=86.0
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCC-----------CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceE
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPT-----------PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~-----------pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~ 216 (999)
....+..||+.+.+....-.....+. ...-.+++...+..++.|+.. ..+++||+.+......
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------GAIFVYQITEKTPTGK 242 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------GCEEEEETTCSSCSEE
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------CeEEEEEcCCCceeee
Confidence 44578889998776544332211110 000222333333345555542 5799999987532222
Q ss_pred EEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEE
Q 001895 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (999)
Q Consensus 217 ~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Lyv 296 (999)
+. .....-.+++...++.+++.|+.++ .+..||+.+........... ..........++ +++
T Consensus 243 -~~-----~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 243 -LI-----GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFYGHS------QSIVSASWVGDD-KVI 304 (425)
T ss_dssp -EC-----CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEECCCS------SCEEEEEEETTT-EEE
T ss_pred -ec-----cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEecCCC------ccEEEEEECCCC-EEE
Confidence 21 1111223344444445777777655 57888887653223221111 112222333356 666
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 297 fGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
.|+.++ .+..++..+. +-...... ....-.++++. ++.++++|+.+ ..|.+||+.+..
T Consensus 305 ~~~~d~------~i~i~d~~~~-~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 305 SCSMDG------SVRLWSLKQN-TLLALSIV----DGVPIFAGRISQDGQKYAVAFMD---------GQVNVYDLKKLN 363 (425)
T ss_dssp EEETTS------EEEEEETTTT-EEEEEEEC----TTCCEEEEEECTTSSEEEEEETT---------SCEEEEECHHHH
T ss_pred EEeCCC------cEEEEECCCC-cEeEeccc----CCccEEEEEEcCCCCEEEEEECC---------CeEEEEECCCCc
Confidence 666543 3444554433 22222111 11112233333 46677777643 348888887654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=88.12 E-value=15 Score=39.37 Aligned_cols=201 Identities=12% Similarity=0.095 Sum_probs=91.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe---ecCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---VQGPG 224 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~---~~g~~ 224 (999)
..++.||+.+.+++.+.... .....-..++.. +..||+.+.. ...+.+||+... .+...+. ..+..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~-g~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAAD-GALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTT-SCEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCC-CCeeecceeecCCCC
Confidence 47899999888877665421 011112233333 3366666532 246888888632 1233332 22223
Q ss_pred CCCC----cccEEEEECCcEEEEEccCCCCCCCCeEEEEECC-CCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEe
Q 001895 225 PGPR----YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA-AKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCG 298 (999)
Q Consensus 225 P~~R----~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~-s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-LyvfG 298 (999)
|..| .-+.+++-.++++|+.+..+ +.+++||+. +. +...+......+...- ...+...+++ +|+.+
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g--~~~~~~~~~~~~g~~p-~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAG--QLSEQSVLTMEAGFGP-RHLVFSPDGQYAFLAG 205 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTS--CEEEEEEEECCTTCCE-EEEEECTTSSEEEEEE
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCC--cEEEeeeEEcCCCCCC-ceEEECCCCCEEEEEe
Confidence 3222 23445555444677665433 378889987 44 4443321111111011 1223334554 77665
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC----cceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECC-
Q 001895 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP----RYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTA- 371 (999)
Q Consensus 299 G~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~----R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~- 371 (999)
..++ ...+|.++.. ++++.........|.. .....+++. ++ .|||.+.. .+.|.+||+.
T Consensus 206 ~~~~----~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---------~~~v~v~~~~~ 271 (347)
T 3hfq_A 206 ELSS----QIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---------YNTLAVFAVTA 271 (347)
T ss_dssp TTTT----EEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---------TTEEEEEEECG
T ss_pred CCCC----EEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---------CCEEEEEEECC
Confidence 4321 2234444432 3344332221111211 122233333 44 57776532 3458888876
Q ss_pred CCeEEEcccC
Q 001895 372 AGVWCDTKSV 381 (999)
Q Consensus 372 t~~W~~v~~~ 381 (999)
++++..+...
T Consensus 272 ~g~~~~~~~~ 281 (347)
T 3hfq_A 272 DGHLTLIQQI 281 (347)
T ss_dssp GGCEEEEEEE
T ss_pred CCcEEEeEEE
Confidence 3355555443
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=88.04 E-value=0.15 Score=56.71 Aligned_cols=68 Identities=9% Similarity=0.048 Sum_probs=39.6
Q ss_pred CeEEEecCCCCHHH-------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH------HHHHHHHHhh-hcCCCC
Q 001895 699 PIKIFGDLHGQFGD-------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------ETITLLLALK-VEYPNN 764 (999)
Q Consensus 699 ~i~vvGDiHG~~~~-------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------evl~ll~~lk-~~~P~~ 764 (999)
++++|||.|.-... |.++.+.. ..+ -+|++||+++.|..+. +.+..++... ....--
T Consensus 5 ~f~~igD~g~g~~~q~~va~~m~~~~~~~---~pd------~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P 75 (342)
T 3tgh_A 5 RFASLGDWGKDTKGQILNAKYFKQFIKNE---RVT------FIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMP 75 (342)
T ss_dssp EEEECCSCBSCCHHHHHHHHHHHHHHHHT---TCC------EEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSE
T ss_pred EEEEEecCCCCCchHHHHHHHHHHHHhhc---CCC------EEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCC
Confidence 58999999975432 22223221 112 5888999998887432 2222222211 122234
Q ss_pred EEEecCCcccc
Q 001895 765 VHLIRGNHEAA 775 (999)
Q Consensus 765 v~llrGNHE~~ 775 (999)
++.+.||||..
T Consensus 76 ~~~vlGNHD~~ 86 (342)
T 3tgh_A 76 FFTVLGTRDWT 86 (342)
T ss_dssp EEECCCHHHHT
T ss_pred EEEeCCCCccC
Confidence 79999999986
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.74 E-value=31 Score=36.51 Aligned_cols=191 Identities=8% Similarity=0.011 Sum_probs=88.0
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+.+||+.+.+-...-.. ....-..+.+ ++..++.|+.+ ..+.+||+.+.. ...... ...
T Consensus 55 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~--~~~~~~-----~~~ 116 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDG-----HTGTIWSIDVDCFTKYCVTGSAD------YSIKLWDVSNGQ--CVATWK-----SPV 116 (369)
T ss_dssp CEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETT------TEEEEEETTTCC--EEEEEE-----CSS
T ss_pred EEEEEeCCCchhhhhhhh-----cCCcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCc--EEEEee-----cCC
Confidence 678889887654433211 1111222222 34566666642 579999998753 222221 111
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCC--ceEEEcccCCC-----CCCCccceEEEEEeCCEEEEEeccC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP--YEWRKLEPEGE-----GPPPCMYATASARSDGLLLLCGGRD 301 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~--~~W~~v~~~~~-----~P~~r~~~~a~~~~~~~LyvfGG~~ 301 (999)
.-.+++...++..++.++.+.......+..||+.+.. ..+........ ..............++.+++.|+.+
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 196 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD 196 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC
Confidence 2233334444456666655422233467777765431 12222211100 0000011222233356677777654
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 302 ~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+ .+..++....+........ ....-.++++. ++.+++.|+. ...|.+||+.+.+....
T Consensus 197 g------~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 197 G------KISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSR---------DTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp S------EEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEE
T ss_pred C------EEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecC---------CceEEEEECCCCceeee
Confidence 3 3455555542222222111 11112233333 5666777764 24589999988765443
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=87.70 E-value=19 Score=39.92 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=52.3
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.-+.|+++|..+++...+-... .....-.++.+ ++.+++.|+.+ ..+.+||+.+.. -.... .
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~--~~~~~-----~ 186 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQK--RLRNM-----T 186 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE--EEEEE-----C
T ss_pred eCCEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCc--EEEEE-----e
Confidence 3458999999998876654321 11111222333 44666777642 578999998752 22111 1
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.......+...++ .+++.|+.++ .++.+|....
T Consensus 187 ~h~~~v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 187 SHSARVGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp CCSSCEEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred CCCCceEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 1122223334444 5777777664 5677777654
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=87.41 E-value=35 Score=36.83 Aligned_cols=199 Identities=9% Similarity=0.054 Sum_probs=91.3
Q ss_pred eEEEEECCCCc------EEEecCCCCCCC-CCcCcEEEEe-----CCEE-EEEcccCCCCCCcCcEEEEecCC------C
Q 001895 151 DVHCYDVLTNK------WSRITPFGEPPT-PRAAHVATAV-----GTMV-VIQGGIGPAGLSAEDLHVLDLTQ------Q 211 (999)
Q Consensus 151 dv~~yD~~t~~------W~~l~~~g~~P~-pR~~hsa~~~-----g~~i-yv~GG~~~~~~~~~dv~vyD~~t------~ 211 (999)
.+.+||+.+.. +..+..... .. ...-.+++.. ++.. ++.|+.+ ..+.+||+.+ .
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDS-DMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYIWKFHPFADESNS 164 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCT-TGGGSCEEEEEEECCC----CEEEEEEETT------SCEEEEEEESSSSHHHH
T ss_pred CEEEEEccCCcccccccceeeccccc-ccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEEEeCCcccccccc
Confidence 67788887766 776654310 00 0112233333 2344 6666642 5688888876 2
Q ss_pred C-CceE---EEee--cCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCC--CCCCCccc
Q 001895 212 R-PRWH---RVVV--QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG--EGPPPCMY 283 (999)
Q Consensus 212 t-~kW~---~v~~--~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~--~~P~~r~~ 283 (999)
. .+|. .+.. .........-.+++...++ +++.|+.++ .+..||+.+. +....-... ..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL--RPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT--EEEEEEECCC---CCCCCE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC--ceeEEEeccccccccCCcc
Confidence 1 1222 1110 0001122233455555666 777777665 6889999876 332221110 00000112
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC---------CCcceeEEEEE-CCEEEEEcCcC
Q 001895 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP---------SPRYQHAAVFV-NARLHVSGGAL 353 (999)
Q Consensus 284 ~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P---------~~R~~hsav~~-~~~L~V~GG~~ 353 (999)
.......++.+++.|+.++. ...+..++..+. .-.........+ ....-.++++. ++.+++.|+.
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~---~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 311 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNS---FGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW- 311 (397)
T ss_dssp EEEEECSSTTEEEEEEEETT---EEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-
T ss_pred ceEEECCCCCEEEEEecCCC---CceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-
Confidence 22223335677777765411 123455554433 211111110000 11112233333 4667777764
Q ss_pred CCCCCcccCCeEEEEECCCCeEEE
Q 001895 354 GGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 354 ~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
...|.+||+.+.+-..
T Consensus 312 --------dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 312 --------DGKLRFWDVKTKERIT 327 (397)
T ss_dssp --------TSEEEEEETTTTEEEE
T ss_pred --------CCeEEEEEcCCCceeE
Confidence 2458899998876443
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=87.34 E-value=26 Score=41.76 Aligned_cols=160 Identities=12% Similarity=0.029 Sum_probs=74.8
Q ss_pred cCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC
Q 001895 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (999)
Q Consensus 200 ~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (999)
...++++|+.+.. ...+.. + .....+-..++...+++.++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQT-G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTE--EEECCC-C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCCc--eEeecc-C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 3579999998742 333321 0 111122223333334444455544444445689999997751 3333321111000
Q ss_pred CccceEEEEEe--CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeE-EEEE-C-CEEEEEcCcCC
Q 001895 280 PCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA-AVFV-N-ARLHVSGGALG 354 (999)
Q Consensus 280 ~r~~~~a~~~~--~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs-av~~-~-~~L~V~GG~~~ 354 (999)
........... ++++++.+..++ ...+|.++.... . ....... ...... .++. + ..||+.+..++
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~-~--~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR-L--IRQVTKG---EWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC-E--EEECCCS---SSCEEEEEEECTTSSEEEEEESSSC
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC-E--EEecCCC---CeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00011223334 777666665543 356777764332 2 2223211 111112 2222 3 35666554422
Q ss_pred CCCCcccCCeEEEEECCCCeEEEcc
Q 001895 355 GGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 355 ~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
.. ...||.+|+.+.+...+.
T Consensus 379 ~~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 379 PL-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TT-----CBEEEEEETTCCCCEESC
T ss_pred Cc-----eEEEEEEEcCCCCceecc
Confidence 11 346999999888766554
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.01 E-value=11 Score=41.16 Aligned_cols=191 Identities=13% Similarity=0.050 Sum_probs=88.0
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE--CCcEEEEEccCCCCCCCCeEEEEEC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~--~~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
+++.++.|+.+ ..+.+||+.+.. .+.. +......-..+.+ .+..+++.|+.|+ .+..||+
T Consensus 138 dg~~l~sgs~d------~~i~iwd~~~~~----~~~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 138 SGTQAVSGSKD------ICIKVWDLAQQV----VLSS---YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTE----EEEE---ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc----EEEE---EcCcCCceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 45666777642 468999998742 2221 1111111112222 2325777787775 5788899
Q ss_pred CCCCceEEEcccCCCCCCCccceEEEEE--eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001895 262 AAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (999)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsa 339 (999)
.+.. .-..+..... .....++.. .++.+++.|+.++. +..++..+.....-.. + ....-.++
T Consensus 200 ~~~~-~~~~~~~~~~----~~~~~~~~~~p~~~~~l~sg~~dg~------v~~wd~~~~~~~~~~~--~---h~~~v~~v 263 (344)
T 4gqb_B 200 RCPK-PASQIGCSAP----GYLPTSLAWHPQQSEVFVFGDENGT------VSLVDTKSTSCVLSSA--V---HSQCVTGL 263 (344)
T ss_dssp TSSS-CEEECC--------CCCEEEEEECSSCTTEEEEEETTSE------EEEEESCC--CCEEEE--C---CSSCEEEE
T ss_pred cccc-eeeeeeccee----eccceeeeecCCCCcceEEeccCCc------EEEEECCCCcEEEEEc--C---CCCCEEEE
Confidence 7762 1122211111 111222222 25677888876542 3333333221001011 1 11112233
Q ss_pred EEE-C-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE--C
Q 001895 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--G 415 (999)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~ 415 (999)
++. + .++++.|+.++ .|.+||..+.+-..+... ...-.+++.- +
T Consensus 264 ~fsp~g~~~lasgs~D~---------~i~vwd~~~~~~~~~~~H-----------------------~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDC---------SLAVLDSSLSELFRSQAH-----------------------RDFVRDATWSPLN 311 (344)
T ss_dssp EECSSSSCCEEEEETTS---------CEEEECTTCCEEEEECCC-----------------------SSCEEEEEECSSS
T ss_pred EEccCCCeEEEEEeCCC---------eEEEEECCCCcEEEEcCC-----------------------CCCEEEEEEeCCC
Confidence 443 3 35777777533 388899988864433211 1111223222 4
Q ss_pred CEEEEEcCCCCCcCcCcEEEeecccccc
Q 001895 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAE 443 (999)
Q Consensus 416 ~~LyV~GG~~~~~~l~Dv~~ld~~~~~~ 443 (999)
..|++-||.++... +|.++..+++.
T Consensus 312 ~~llas~s~D~~v~---~w~v~~~~~~~ 336 (344)
T 4gqb_B 312 HSLLTTVGWDHQVV---HHVVPTEPLPA 336 (344)
T ss_dssp TTEEEEEETTSCEE---EEECCC-----
T ss_pred CeEEEEEcCCCeEE---EEECCCCCCCC
Confidence 56888888876543 56666555443
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=86.80 E-value=0.37 Score=56.93 Aligned_cols=67 Identities=13% Similarity=0.107 Sum_probs=42.5
Q ss_pred CCeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh----------HHHH
Q 001895 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS----------LETI 751 (999)
Q Consensus 698 ~~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s----------~evl 751 (999)
-.|+.++|+||++. .|..+++...-... ..-+|..||.++..+.+ ..++
T Consensus 20 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 20 IAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp EEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred EEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 45889999999863 56666666532211 11345579999987543 3555
Q ss_pred HHHHHhhhcCCCCEEEecCCccc
Q 001895 752 TLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.+|-.+.. -++..||||.
T Consensus 95 ~~ln~lg~-----D~~t~GNHef 112 (527)
T 3qfk_A 95 DFYNRMAF-----DFGTLGNHEF 112 (527)
T ss_dssp HHHHHTCC-----CEECCCGGGG
T ss_pred HHHHhcCC-----cEEecccccc
Confidence 66655532 2456899995
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=86.72 E-value=17 Score=40.62 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=72.2
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++..++.|+.+ ..+.+||+.+.. -...- ......-.+..+++ .+++.|+.++ .+..||+.+
T Consensus 142 d~~~l~~g~~d------g~i~iwd~~~~~--~~~~~-----~~h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~~ 202 (435)
T 1p22_A 142 DDQKIVSGLRD------NTIKIWDKNTLE--CKRIL-----TGHTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVNT 202 (435)
T ss_dssp CSSEEEEEESS------SCEEEEESSSCC--EEEEE-----CCCSSCEEEEECCS-SEEEEEETTS-----CEEEEESSS
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCe--EEEEE-----cCCCCcEEEEEECC-CEEEEEcCCC-----eEEEEECCC
Confidence 55566666642 579999988753 22211 11122223334455 5778888776 588899987
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE-EECCCCCCCCcceeEEEEE
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w-~~~~g~~P~~R~~hsav~~ 342 (999)
.....+. .. . .....++.. ++.+++.|+.++. +..++......... ....+. .....++..
T Consensus 203 ~~~~~~~-~~-h-----~~~v~~l~~-~~~~l~s~s~dg~------i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~ 264 (435)
T 1p22_A 203 GEMLNTL-IH-H-----CEAVLHLRF-NNGMMVTCSKDRS------IAVWDMASPTDITLRRVLVGH----RAAVNVVDF 264 (435)
T ss_dssp CCEEEEE-CC-C-----CSCEEEEEC-CTTEEEEEETTSC------EEEEECSSSSCCEEEEEECCC----SSCEEEEEE
T ss_pred CcEEEEE-cC-C-----CCcEEEEEE-cCCEEEEeeCCCc------EEEEeCCCCCCceeeeEecCC----CCcEEEEEe
Confidence 7322221 11 1 112223333 4446666775542 33333332211111 111111 111222333
Q ss_pred CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
++..++.|+.+ ..|.+||+.+.+-.
T Consensus 265 ~~~~l~s~~~d---------g~i~vwd~~~~~~~ 289 (435)
T 1p22_A 265 DDKYIVSASGD---------RTIKVWNTSTCEFV 289 (435)
T ss_dssp ETTEEEEEETT---------SEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC---------CeEEEEECCcCcEE
Confidence 66666776642 35889999887543
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.71 E-value=36 Score=36.25 Aligned_cols=149 Identities=14% Similarity=0.182 Sum_probs=75.9
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+++.|+. ...+.+||+.+.. .-..+. ..+ ..-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~-~~~~~~---~~~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~ 154 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGK-QIKSID---AGP--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESG 154 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTE-EEEEEE---CCT--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTC
T ss_pred CCEEEEEeC------CCcEEEEECCCCC-EEEEEe---CCC--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCC
Confidence 356666664 2578999998752 112222 111 1122344444446777777654 5788888876
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-C
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~ 343 (999)
...+...... ......+...++++++.|+.++. +..++..+. +-.... .+. ...-.++++. +
T Consensus 155 ~~~~~~~~~~------~~v~~~~~spdg~~lasg~~dg~------i~iwd~~~~-~~~~~~-~~h---~~~v~~l~~spd 217 (321)
T 3ow8_A 155 KKEYSLDTRG------KFILSIAYSPDGKYLASGAIDGI------INIFDIATG-KLLHTL-EGH---AMPIRSLTFSPD 217 (321)
T ss_dssp SEEEEEECSS------SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEEE-CCC---SSCCCEEEECTT
T ss_pred ceeEEecCCC------ceEEEEEECCCCCEEEEEcCCCe------EEEEECCCC-cEEEEE-ccc---CCceeEEEEcCC
Confidence 3333322111 11222233346778888876543 344444433 221111 111 1111233333 5
Q ss_pred CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+.+++.|+.++ .|.+||+.+.+..
T Consensus 218 ~~~l~s~s~dg---------~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 218 SQLLVTASDDG---------YIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEECTTS---------CEEEEETTTCCEE
T ss_pred CCEEEEEcCCC---------eEEEEECCCccee
Confidence 77888887533 3888999877644
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.49 E-value=36 Score=35.97 Aligned_cols=196 Identities=9% Similarity=0.021 Sum_probs=84.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC--
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-- 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~-- 226 (999)
..+.+||+.+.+........ . .-.+++.. ++..++.++.. .......+.+||+.+........... ..+.
T Consensus 96 g~i~iwd~~~~~~~~~~~~~---~--~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~-~~~~~~ 168 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP---V--PVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVS-EEPIHK 168 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS---S--CEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEEC-SSCSEE
T ss_pred CeEEEEECCCCcEEEEeecC---C--CeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccc-cceeee
Confidence 47889999887654443221 1 11222222 33445554432 11223578888887542111111111 1110
Q ss_pred -----C-CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 227 -----P-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 227 -----~-R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
. ..-.+++...++.+++.|+.++ .+..||+.+..-....+..... .........++.+++.|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEET
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecC
Confidence 0 0222233333345667777664 6889999872112222222111 1222223336667777765
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCc-----ccCCeEEEEECCCCe
Q 001895 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV-----EDSSSVAVLDTAAGV 374 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~-----~~~~~v~vyD~~t~~ 374 (999)
++ .+..++..+. ........ ......+++. ++..+++|+..+..... .....+.+||..+.+
T Consensus 239 d~------~i~v~d~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 239 DT------NSFLVDVSTL-QVLKKYET-----DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp TS------EEEEEETTTC-CEEEEEEC-----SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred Cc------eEEEEECCCC-ceeeeecC-----CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 43 3444554433 22222111 1111222222 45566666543321100 012268888887775
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=86.40 E-value=35 Score=35.75 Aligned_cols=99 Identities=14% Similarity=0.076 Sum_probs=49.1
Q ss_pred eEEEEECC--CCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVL--TNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~--t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+|++. +.++..+.... ....-..++.. +..+|+.+.. ...+++||+... .....+... +.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~-~~~~~~~~~---~~ 127 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESA---LPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDG-LPVGVVDVV---EG 127 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEE---CSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETT-EEEEEEEEE---CC
T ss_pred eEEEEEecCCCCceeeccccc---cCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCC-ccccccccc---cC
Confidence 56666665 77777664331 11122333333 3356665532 246889988521 112333221 12
Q ss_pred CCcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCC-CCceEE
Q 001895 227 PRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA-KPYEWR 269 (999)
Q Consensus 227 ~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s-~~~~W~ 269 (999)
...-+.++... +..||+.+..+ ..+.+||+.+ . ++.
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~--~~~ 165 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDG--HLV 165 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTS--CEE
T ss_pred CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCC--cee
Confidence 22233344443 33677665333 3688999977 5 454
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=86.31 E-value=16 Score=37.22 Aligned_cols=198 Identities=8% Similarity=-0.098 Sum_probs=95.4
Q ss_pred eEEEEECCC-CcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLT-NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t-~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.++++|+.+ .+...+.... ........+..-+++.+++++.... ....+|.+|..+.. ...+. .. . .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~--~~~~~---~~-~-~- 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT--PRLMT---KN-L-P- 130 (297)
T ss_dssp EEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC--CEECC---SS-S-S-
T ss_pred eEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc--eEEee---cC-C-C-
Confidence 789999998 7777664321 1112122222224455555543221 23578888887643 33332 11 1 1
Q ss_pred ccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc-CCCCCCc
Q 001895 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR-DASSVPL 307 (999)
Q Consensus 230 ~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~-~~~~~~~ 307 (999)
...++.. ++..|++.++.++. ..+|.+|+.+. ....+..... .........++..+++++. ++ .
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~----~ 196 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHGEG-----RNDGPDYSPDGRWIYFNSSRTG----Q 196 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCSSS-----CEEEEEECTTSSEEEEEECTTS----S
T ss_pred ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccCCC-----ccccceECCCCCEEEEEecCCC----C
Confidence 2223333 33356655655442 47888888776 5655543322 1222233345554444443 32 3
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCc--ccCCeEEEEECCCCeEEEccc
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV--EDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~--~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..+|.++.... ....... ........++. +++.+++++........ .....|+++|+.+.+...+..
T Consensus 197 ~~i~~~~~~~~---~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS---SVERITD---SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS---CEEECCC---CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC---CcEEEec---CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 45777764433 2222221 11112222332 55555555543321100 012569999999988766554
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=86.29 E-value=26 Score=36.77 Aligned_cols=96 Identities=6% Similarity=0.007 Sum_probs=45.9
Q ss_pred CeEEEEECC-CCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
+.+++||+. +.++..+.... ....-+.++.. +..+|+.+.. ...+.+|++...+.++..+... +.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~---~~ 82 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD---VPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAES---AL 82 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE---CSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEE---EC
T ss_pred CeEEEEEECCCCcEEEeeeEe---cCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeecccc---cc
Confidence 467888874 45555443321 11122233333 3356655442 1578888887322346655422 11
Q ss_pred CCcccEEEEECC-cEEEEEccCCCCCCCCeEEEEECC
Q 001895 227 PRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 227 ~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
...-..++...+ ..||+.+..+ ..+..||+.
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 112233444433 3566655332 357788873
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=86.22 E-value=62 Score=39.02 Aligned_cols=179 Identities=11% Similarity=0.060 Sum_probs=85.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+.+||..++.....-.. .... -.+++.. ++..++.|+. ...+.+||+.+.. ....-. + ....
T Consensus 36 ~v~iwd~~~~~~~~~~~~---~~~~-v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~--~~~~~~-~---~~~~ 99 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQV---TETP-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE--KVVDFE-A---HPDY 99 (814)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSC-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC--EEEEEE-C---CSSC
T ss_pred EEEEEECCCCceEEEEec---CCCc-EEEEEEeCCCCEEEEEeC------CCeEEEEECCCCc--EEEEEe-c---CCCC
Confidence 788899888765443221 0111 1122222 3455666654 2579999998753 322211 1 1111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCCCc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSVPL 307 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~LyvfGG~~~~~~~~ 307 (999)
-.+++...++..++.|+.++ .+..||+.+.. .....-.... ....++... ++.+++.|+.++
T Consensus 100 v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~~~dg----- 163 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDR----- 163 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEECCS-----SCEEEEEEETTEEEEEEEEETTS-----
T ss_pred EEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcCCC-----CcEEEEEEEcCCCCEEEEEeCCC-----
Confidence 22333333444666776654 57888886641 2222211111 112223332 567777777654
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE---CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~---~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.+..++.... ...+..... ....-..+++. ++.++++|+.+ ..|.+||+.+.+-
T Consensus 164 -~v~vwd~~~~-~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 164 -TVKVWSLGQS-TPNFTLTTG---QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEEETTCS-SCSEEEECC---CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTEE
T ss_pred -eEEEEECCCC-cceeEEecC---CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCcE
Confidence 2344443222 111111111 11112233333 56777777753 3588999988764
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=86.18 E-value=0.3 Score=57.44 Aligned_cols=71 Identities=20% Similarity=0.110 Sum_probs=41.5
Q ss_pred CCeEEEecCCCCHH----------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHHHHhhhcCC
Q 001895 698 APIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLLLALKVEYP 762 (999)
Q Consensus 698 ~~i~vvGDiHG~~~----------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~lk~~~P 762 (999)
..|+.++|+||.+. .+..+++.+.-.... .....-+|..||+++..+. ...++.+|-.+.
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~-~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---- 83 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAA-EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---- 83 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHH-HTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT----
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhc-cCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC----
Confidence 45889999999853 455555544210000 0000146779999976542 234556665553
Q ss_pred CCEEEecCCccc
Q 001895 763 NNVHLIRGNHEA 774 (999)
Q Consensus 763 ~~v~llrGNHE~ 774 (999)
-.++..||||.
T Consensus 84 -~d~~~~GNHEf 94 (516)
T 1hp1_A 84 -YDAMAIGNHEF 94 (516)
T ss_dssp -CCEEECCGGGG
T ss_pred -CCEEeeccccc
Confidence 23677899997
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=86.10 E-value=31 Score=42.13 Aligned_cols=188 Identities=12% Similarity=0.012 Sum_probs=98.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC--CCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g--~~P~ 226 (999)
.-+++||+.+++++.+...+ .+. ..-.+.+.. ++.|++... ..+++||..+. +|....... ..+.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~-~~~-~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK-NEL-LDVRVFYEDKNKKIWIGTH--------AGVFVIDLASK--KVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT-TCC-CCEEEEEECTTSEEEEEET--------TEEEEEESSSS--SCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC-CCC-CeEEEEEECCCCCEEEEEC--------CceEEEeCCCC--eEEecccCccccccc
Confidence 57889999999888875321 111 112223333 347666432 35899998875 366654221 1111
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSV 305 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~ 305 (999)
..-.+++.-.++.||+..-. .-+++||+.+. +|+........|. ....++.. .++.||+...
T Consensus 495 -~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~--~~i~~i~~d~~g~lWi~T~------ 557 (781)
T 3v9f_A 495 -NFVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCS--NTINQIYRSSKGQMWLATG------ 557 (781)
T ss_dssp -SCEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSC--SCEEEEEECTTSCEEEEET------
T ss_pred -ceeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCC--CeeEEEEECCCCCEEEEEC------
Confidence 11223333344467764321 23889999888 8877654222111 11122222 3578888532
Q ss_pred CcccE-EEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 306 PLASA-YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 306 ~~~d~-~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..+ +.|+..+. ++.......-.|.... .+++.- ++.||+.+. +.+.+||+++.++......
T Consensus 558 --~Glv~~~d~~~~-~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 558 --EGLVCFPSARNF-DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp --TEEEEESCTTTC-CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECGG
T ss_pred --CCceEEECCCCC-cEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEeccc
Confidence 123 45555433 3333322211222222 333333 577887642 2388999999998877543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.11 E-value=35 Score=36.93 Aligned_cols=181 Identities=9% Similarity=0.016 Sum_probs=82.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC----
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP---- 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P---- 225 (999)
.+.+||........+... ...-.+++.. ++..++.|+. ...+.+||+.+.. ....-.....+
T Consensus 131 ~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~--~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 131 ELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDV------ENVTILWNVISGT--VMQHFELKETGGSSI 197 (425)
T ss_dssp CEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEET------TCCEEEEETTTTE--EEEEECCC-------
T ss_pred eEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEec------CCeEEEEECCCCc--EEEEeeccccCccce
Confidence 577788554444444321 1111222222 3455555553 2468899997742 22211110111
Q ss_pred -------CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001895 226 -------GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (999)
Q Consensus 226 -------~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfG 298 (999)
....-.+++...++ .++.|+.++ .+..||+.+........... ..........++.+++.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g-----~i~~~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPKG-----AIFVYQITEKTPTGKLIGHH------GPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGGG-----CEEEEETTCSSCSEEECCCS------SCEEEEEEETTTTEEEEE
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCCC-----eEEEEEcCCCceeeeeccCC------CceEEEEECCCCCEEEEE
Confidence 00012333344443 466666654 68899998763222221111 112222333466677777
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 299 G~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+.++. +..++.... ....... .....-.++++. ++ +++.|+. ...|.+||+.+.+-..
T Consensus 266 ~~d~~------i~i~d~~~~-~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~---------d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 266 SDDGT------LRIWHGGNG-NSQNCFY----GHSQSIVSASWVGDD-KVISCSM---------DGSVRLWSLKQNTLLA 324 (425)
T ss_dssp ETTSC------EEEECSSSB-SCSEEEC----CCSSCEEEEEEETTT-EEEEEET---------TSEEEEEETTTTEEEE
T ss_pred cCCCE------EEEEECCCC-ccceEec----CCCccEEEEEECCCC-EEEEEeC---------CCcEEEEECCCCcEeE
Confidence 75442 333433321 1111111 111222344444 45 6666664 2458999998876443
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=84.84 E-value=41 Score=37.47 Aligned_cols=173 Identities=12% Similarity=0.053 Sum_probs=85.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||+.+.+-...-.. ....-.+++.. ++..++.|+.+ ..+.+||+.+.. .+.. +....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~----~~~~---~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG----HTDRIYSTIYDHERKRCISASMD------TTIRIWDLENGE----LMYT---LQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC----CSSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTE----EEEE---ECCCS
T ss_pred CeEEEEECCCCcEEEEecC----CCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCc----EEEE---EeCCC
Confidence 3688899987754333211 11111222222 34556666642 469999998742 2221 11122
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
..-....+.+ ..++.|+.++ .+..||+.+....+... .. ......+...++.+++.|+ ++
T Consensus 353 ~~v~~~~~~~-~~l~s~s~dg-----~v~vwd~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~l~~~~-dg------ 412 (464)
T 3v7d_B 353 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDYSRKFSYH--HT-----NLSAITTFYVSDNILVSGS-EN------ 412 (464)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEE--CT-----TCCCEEEEEECSSEEEEEE-TT------
T ss_pred CcEEEEEEcC-CEEEEEeCCC-----cEEEEECCCCceeeeec--CC-----CCccEEEEEeCCCEEEEec-CC------
Confidence 2223344555 5677777665 58889998763233321 11 1223334455677777776 32
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEEC
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~ 370 (999)
.+..++..+. +.....- .+....-.++++.++.+++.++.++ ..-++++|.
T Consensus 413 ~i~iwd~~~g---~~~~~~~-~~~~~~v~~v~~~~~~l~~~~~~~g-------~~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSG---KLVHANI-LKDADQIWSVNFKGKTLVAAVEKDG-------QSFLEILDF 463 (464)
T ss_dssp EEEEEETTTC---CEEESCT-TTTCSEEEEEEEETTEEEEEEEETT-------EEEEEEEEC
T ss_pred eEEEEECCCC---cEEehhh-ccCCCcEEEEEecCCEEEEEEEeCC-------eEEEEEeec
Confidence 2445554433 2222211 1122233445555666766666433 223666764
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=84.68 E-value=19 Score=39.01 Aligned_cols=201 Identities=12% Similarity=0.008 Sum_probs=94.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+|.+|+.+.+...+.... .......+..-++ .|++... + ..++++|+.+.. -..+. ..|....
T Consensus 61 ~l~~~d~~~g~~~~lt~~~---~~~~~~~~~spdg~~l~~~~~-~------~~l~~~d~~~g~--~~~~~---~~~~~~~ 125 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGR---GDNTFGGFLSPDDDALFYVKD-G------RNLMRVDLATLE--ENVVY---QVPAEWV 125 (388)
T ss_dssp EEEEEETTTCEEEECCCSS---CBCSSSCEECTTSSEEEEEET-T------TEEEEEETTTCC--EEEEE---ECCTTEE
T ss_pred eEEEEeCCCCceEEeeeCC---CCCccceEEcCCCCEEEEEeC-C------CeEEEEECCCCc--ceeee---echhhcc
Confidence 7999999999888776431 1111111222234 4444432 1 479999998853 33333 2233322
Q ss_pred ccEEEE-ECCcEEEEE-c--cCC--------------CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-
Q 001895 230 GHVMAL-VGQRYLMAI-G--GND--------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS- 290 (999)
Q Consensus 230 ~h~~~v-~~~~~Lyv~-G--G~~--------------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~- 290 (999)
...... -.++.+++. - +.+ .......++++|+.+. +-..+..... .........
T Consensus 126 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~~~~~~~sp~ 198 (388)
T 3pe7_A 126 GYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQENQ-----WLGHPIYRPY 198 (388)
T ss_dssp EEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEESS-----CEEEEEEETT
T ss_pred cccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecCCc-----cccccEECCC
Confidence 222222 122222221 1 000 0112368999999887 5444432211 222333444
Q ss_pred CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 291 DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 291 ~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
+++.++|............+|.++.... ........ .........++. +++.+++........ ...|+++|
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d 270 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTH-AEGESCTHEFWVPDGSALVYVSYLKGSP----DRFIYSAD 270 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCC-CTTEEEEEEEECTTSSCEEEEEEETTCC----CEEEEEEC
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeC-CCCcccccceECCCCCEEEEEecCCCCC----cceEEEEe
Confidence 5666655544322223457777776543 11222211 111111122232 454333322211110 12599999
Q ss_pred CCCCeEEEcccC
Q 001895 370 TAAGVWCDTKSV 381 (999)
Q Consensus 370 ~~t~~W~~v~~~ 381 (999)
+++++-..+...
T Consensus 271 ~~~g~~~~l~~~ 282 (388)
T 3pe7_A 271 PETLENRQLTSM 282 (388)
T ss_dssp TTTCCEEEEEEE
T ss_pred cCCCceEEEEcC
Confidence 999987766544
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=84.66 E-value=47 Score=35.70 Aligned_cols=114 Identities=5% Similarity=-0.034 Sum_probs=52.9
Q ss_pred CCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC
Q 001895 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP 331 (999)
Q Consensus 253 ~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P 331 (999)
...++.+|+.+. +...+.... .......... ++..+++............+|.++.... . +.......
T Consensus 167 ~~~l~~~d~~~g--~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~--~~~l~~~~- 235 (396)
T 3c5m_A 167 TCRLIKVDIETG--ELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-N--VRKIKEHA- 235 (396)
T ss_dssp CEEEEEEETTTC--CEEEEEEES-----SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-C--CEESSCCC-
T ss_pred cceEEEEECCCC--cEEeeccCC-----cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-c--eeEeeccC-
Confidence 457999999887 665554221 1222222333 3543333332221112246777776433 2 22222210
Q ss_pred CCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 332 SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 332 ~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
........++. +++.+++........ ...|+++|+.+++...+...
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~ 282 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMVM 282 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEEC
T ss_pred CCccccceEECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeeeC
Confidence 11112222333 455444433222111 23499999999887776543
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=83.97 E-value=59 Score=36.26 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=35.5
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+++.|+.+ ..+.+||+.+.. .......+ ..... .+++..++ .+++.|+.++ .+..||+.+.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~--~~~~~~~~--h~~~v-~~~~~sd~-~~l~s~~~d~-----~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCF--IVDKWLFG--HKHFV-SSICCGKD-YLLLSAGGDD-----KIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTT--CEEEECCC--CSSCE-EEEEECST-TEEEEEESSS-----EEEEEETTTC
T ss_pred CcEEEEEcCC------CcEEEEECCCCc--eeeeeecC--CCCce-EEEEECCC-CEEEEEeCCC-----eEEEEECCCC
Confidence 6777777753 579999998753 22211111 11111 22222244 5667777654 6888999876
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=83.37 E-value=44 Score=40.32 Aligned_cols=183 Identities=10% Similarity=0.029 Sum_probs=89.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||..+++....-.. ....-.+++.. ++..++.|+. ...+.+||+.+. |........ ...
T Consensus 77 g~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~---~~~~~~~~~--~~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTFEG--HEH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT---SEEEEEEEC--CSS
T ss_pred CeEEEEECCCCcEEEEEec----CCCCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC---ceEEEEEcC--CCC
Confidence 3788999988776543221 11111122222 3445555653 246889998874 333321111 111
Q ss_pred cccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCC
Q 001895 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (999)
Q Consensus 229 ~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~LyvfGG~~~~~~ 305 (999)
.-.+++... ++.+++.|+.++ .+..||+.+....+........ ......... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEEEeCCC---
Confidence 122333333 446788887765 6889998765334443322211 111222222 667777777543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.+..++..+. .-..... + ....-.++++. ++.+++.|+.+ ..|.+||+.+.+-..
T Consensus 209 ---~i~~~d~~~~-~~~~~~~-~---~~~~v~~~~~~~~~~~l~~~~~d---------g~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVATLE-G---HMSNVSFAVFHPTLPIIISGSED---------GTLKIWNSSTYKVEK 264 (814)
T ss_dssp ---EEEEEETTTT-EEEEEEE-C---CSSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTCSEEE
T ss_pred ---EEEEEECCCC-cEEEEEc-C---CCCCEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCcEEE
Confidence 2444444333 2111111 1 11111223333 45677777753 348889988765443
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=82.99 E-value=53 Score=39.45 Aligned_cols=200 Identities=11% Similarity=0.026 Sum_probs=100.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCC----------CCCcCcEEEEecCCCCCceEEE
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPA----------GLSAEDLHVLDLTQQRPRWHRV 218 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~----------~~~~~dv~vyD~~t~t~kW~~v 218 (999)
..++++|+.+++....... ... ..+.+.. +++.++++..... ......+|++++.+...+-..+
T Consensus 151 ~~i~v~d~~tg~~~~~~~~----~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v 225 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLE----RVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC 225 (710)
T ss_dssp EEEEEEETTTTEEEEEEEE----EEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE
T ss_pred EEEEEEECCCCCCCccccc----Ccc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE
Confidence 3799999999988765322 111 1223332 4444444332211 0223569999998753111222
Q ss_pred eecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC------CCceEEEcccCCCCCCCccceEEEEEeCC
Q 001895 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA------KPYEWRKLEPEGEGPPPCMYATASARSDG 292 (999)
Q Consensus 219 ~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s------~~~~W~~v~~~~~~P~~r~~~~a~~~~~~ 292 (999)
. . ....+........-.+++.++++...+....+++|.+|+.+ ....|..+..... .........++
T Consensus 226 ~-~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~s~dg~ 298 (710)
T 2xdw_A 226 A-E-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYDYVTNEGT 298 (710)
T ss_dssp E-C-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEEEEEEETT
T ss_pred e-c-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-----cEEEEEeccCC
Confidence 2 1 11122333333343333444444333322357899999975 3224666654322 11223334567
Q ss_pred EEEEEeccCCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 293 LLLLCGGRDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 293 ~LyvfGG~~~~~~~~~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
.||+.+..+. ....++.++..+.. .|+-..... ....-..+++. ++++++....++ ...|+++|
T Consensus 299 ~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~lv~~~~~~g-------~~~l~~~~ 365 (710)
T 2xdw_A 299 VFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH---EKDVLEWVACVRSNFLVLCYLHDV-------KNTLQLHD 365 (710)
T ss_dssp EEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC---SSCEEEEEEEETTTEEEEEEEETT-------EEEEEEEE
T ss_pred EEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC---CCCeEEEEEEEcCCEEEEEEEECC-------EEEEEEEE
Confidence 7888765432 23457777665432 354333221 11223345555 678887765433 34599999
Q ss_pred CCCCe
Q 001895 370 TAAGV 374 (999)
Q Consensus 370 ~~t~~ 374 (999)
+.+++
T Consensus 366 ~~~g~ 370 (710)
T 2xdw_A 366 LATGA 370 (710)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 86654
|
| >1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A* | Back alignment and structure |
|---|
Probab=82.74 E-value=38 Score=38.80 Aligned_cols=48 Identities=8% Similarity=-0.101 Sum_probs=31.5
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 210 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t 210 (999)
..|.||..+++...-.-.+ .| . --+|....+++|+|-| +..|+||..+
T Consensus 168 ~yw~yd~~~~~~~~~~w~g-i~--~-iDAA~~~~g~~YfFkG--------~~y~rfd~~~ 215 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPA-VG--N-CTSALRWLGRYYCFQG--------NQFLRFNPVS 215 (460)
T ss_dssp EEEEEETTTTEEEEECCTT-SC--C-CSEEEEETTEEEEEET--------TEEEEECTTT
T ss_pred cEEEEecccceeecccCCC-CC--c-cchheeeCCceEEEEC--------CEEEEEcCcc
Confidence 6799999887665432222 22 2 3455555789999988 4678888754
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=82.65 E-value=15 Score=39.91 Aligned_cols=207 Identities=13% Similarity=0.012 Sum_probs=92.5
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCE-EEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTM-VVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~-iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
....++.+|+.+.+...+... .....+....- ++. |++... .........+|++|+.+. ++..+.. ..+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~--~~~~l~~--~~~ 236 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGS--NVRKIKE--HAE 236 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSC--CCEESSC--CCT
T ss_pred CcceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCC--ceeEeec--cCC
Confidence 445899999999888777532 11222222222 233 444432 222222357999998764 3555531 001
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCC-
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDAS- 303 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~- 303 (999)
...-...+.-.++..+++...........++++|+.+. +...+..... . . ..... +++++++++.+..
T Consensus 237 -~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~-~-~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 237 -GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVMPP-----C-S-HLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp -TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEECCS-----E-E-EEEECSSSSEEEEEECCC--
T ss_pred -CccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeCCC-----C-C-CCccCCCCceEEEecCCcce
Confidence 11111222332333333333322222244999999887 6655543221 1 1 33344 6777776553210
Q ss_pred ---------CCCcccEEEEecCCCCeEEEEECCCCCC------CCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEE
Q 001895 304 ---------SVPLASAYGLAKHRDGRWEWAIAPGVSP------SPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAV 367 (999)
Q Consensus 304 ---------~~~~~d~~~~~~~~~~~W~w~~~~g~~P------~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~v 367 (999)
......++.++.... ............ ........++ -+++.+++..... + ...+|.
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~-----~~~l~~ 379 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAK-SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-G-----VPAIYI 379 (396)
T ss_dssp --------CCCCCCEEEEEETTTT-BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-S-----SCEEEE
T ss_pred eeccccccccCCCCcEEEEecccC-ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-C-----CceEEE
Confidence 012345677765433 222222111100 0000111122 2444333433221 1 346999
Q ss_pred EECCCCeEEEccc
Q 001895 368 LDTAAGVWCDTKS 380 (999)
Q Consensus 368 yD~~t~~W~~v~~ 380 (999)
+|+.+..++.+..
T Consensus 380 ~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 380 ADVPESYKHLEHH 392 (396)
T ss_dssp EECCTTCC-----
T ss_pred EEEcccccccccc
Confidence 9999988776543
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.48 E-value=20 Score=38.67 Aligned_cols=162 Identities=12% Similarity=0.097 Sum_probs=78.5
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++.+++.||.+ ..+.+||+.+. +|........ .....-.+++...++.+++.|+.++ .+..||+.+
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~--~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGD--SWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETT--EEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECC
T ss_pred CCCEEEEEcCC------CeEEEEEcCCC--cceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccC
Confidence 34666677642 46888888775 3543321100 0111112233333446777888776 456677766
Q ss_pred CCceEEEcccCCCCCCCccceEEE-EEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATAS-ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~-~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~ 342 (999)
. .+..+...... ...-.++ ...++.+++.|+.++. ..+|.+ .....+........ ....-.++++.
T Consensus 93 ~--~~~~~~~~~~h---~~~v~~v~~sp~~~~l~s~s~D~~----v~iwd~--~~~~~~~~~~~~~~--h~~~v~~~~~~ 159 (345)
T 3fm0_A 93 D--DFECVTTLEGH---ENEVKSVAWAPSGNLLATCSRDKS----VWVWEV--DEEDEYECVSVLNS--HTQDVKHVVWH 159 (345)
T ss_dssp C---EEEEEEECCC---SSCEEEEEECTTSSEEEEEETTSC----EEEEEE--CTTSCEEEEEEECC--CCSCEEEEEEC
T ss_pred C--CeEEEEEccCC---CCCceEEEEeCCCCEEEEEECCCe----EEEEEC--CCCCCeEEEEEecC--cCCCeEEEEEC
Confidence 6 45433222110 1112222 2346778888886643 223333 22222222211110 11111223332
Q ss_pred -CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
++.+++.|+.++ .|.+||..+..|..+..+
T Consensus 160 p~~~~l~s~s~d~---------~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 160 PSQELLASASYDD---------TVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SSSSCEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEeCCC---------cEEEEEecCCCEEEEEEe
Confidence 566777777533 478899989888765544
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=82.23 E-value=57 Score=39.78 Aligned_cols=189 Identities=6% Similarity=0.013 Sum_probs=96.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC---CCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGP 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g---~~P 225 (999)
.-+++||+.+++++.+...........-.+.+.. ++.|++... +.+++||..+. +|+...... .++
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQR--SFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTT--EEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCC--eEEEccccccccccC
Confidence 5789999999988887542110001111222222 346666432 35899998875 577664220 111
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCC-CCccceEEEEE-eCCEEEEEeccCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP-PPCMYATASAR-SDGLLLLCGGRDAS 303 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P-~~r~~~~a~~~-~~~~LyvfGG~~~~ 303 (999)
... -.+++...++.||+... . -+++||+.+. ++ ......... .+.....+... .++.||+...
T Consensus 497 ~~~-i~~i~~d~~g~lWigt~-~------Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 497 SKQ-ITTLFRDSHKRLWIGGE-E------GLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp CCC-EEEEEECTTCCEEEEES-S------CEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES----
T ss_pred Cce-EEEEEECCCCCEEEEeC-C------ceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC----
Confidence 111 12233334446777543 2 4899999888 77 433210101 11112222222 3578887532
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..++.|+..+. ++.......-.|... -.+++.- ++.||+.+. +.+.+||+++.++.....
T Consensus 562 ----~Gl~~~d~~~~-~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 562 ----EGFYCFNEKDK-QIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp ----SCEEEEETTTT-EEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECG
T ss_pred ----CCceeECCCCC-cEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCC
Confidence 13667776554 444332221122222 2233332 467887652 348899999999887654
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=81.84 E-value=51 Score=34.54 Aligned_cols=193 Identities=9% Similarity=-0.016 Sum_probs=87.3
Q ss_pred CeEEEEEC-CCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEE--EeecCCCCC
Q 001895 150 ADVHCYDV-LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR--VVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~-~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~--v~~~g~~P~ 226 (999)
..+.+||+ .+.....+... +....-.+++...+.+++.|+.+ ..+.+||+.+....-.. .........
T Consensus 79 g~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SCEEEECSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred CeEEEEEeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEee
Confidence 37888999 88877665431 01111122222224455555532 56888887651000000 000011222
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC-CCceEEEcccCCCCCCCccceEEEEE-e-CCEEEEEeccCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASAR-S-DGLLLLCGGRDAS 303 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~-~-~~~LyvfGG~~~~ 303 (999)
...-.+++...+ . ++.|+.++ .+..||+.+ ............. ..-.++.. . ++.+++.|+.++.
T Consensus 150 ~~~v~~~~~~~~-~-l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 150 KNKIFTMDTNSS-R-LIVGMNNS-----QVQWFRLPLCEDDNGTIEESGLK-----YQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp CCCEEEEEECSS-E-EEEEESTT-----EEEEEESSCCTTCCCEEEECSCS-----SCEEEEEECSGGGCEEEEEETTSE
T ss_pred CCceEEEEecCC-c-EEEEeCCC-----eEEEEECCccccccceeeecCCC-----CceeEEEECCCCCCEEEEEecCCc
Confidence 222233434444 4 55665554 688999977 3212222211111 11223333 3 5677777776432
Q ss_pred CCCcccEEEEecC-----CCCeEEEEECCCCCC---CCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 304 SVPLASAYGLAKH-----RDGRWEWAIAPGVSP---SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 304 ~~~~~d~~~~~~~-----~~~~W~w~~~~g~~P---~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
..+|.++.. ......+........ ....-.++++. ++++++.|+.+ ..|.+||+.+.+
T Consensus 218 ----i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------g~i~vwd~~~~~ 284 (342)
T 1yfq_A 218 ----VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD---------GIISCWNLQTRK 284 (342)
T ss_dssp ----EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT---------SCEEEEETTTTE
T ss_pred ----EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC---------ceEEEEcCccHh
Confidence 334445443 121222222111000 00012233333 56777777753 348899999886
Q ss_pred EE
Q 001895 375 WC 376 (999)
Q Consensus 375 W~ 376 (999)
-.
T Consensus 285 ~~ 286 (342)
T 1yfq_A 285 KI 286 (342)
T ss_dssp EE
T ss_pred Hh
Confidence 54
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=81.15 E-value=38 Score=40.57 Aligned_cols=110 Identities=7% Similarity=-0.015 Sum_probs=50.5
Q ss_pred eEEEEECCC-CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC
Q 001895 255 DVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP 333 (999)
Q Consensus 255 dv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~ 333 (999)
.++.+|+.+ . +-..+.... ........... .+++.++++..+... ....++.++..+. ............--
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~~--~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLGK--EQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCCS--CSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCCC--CcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 789999987 7 333332210 01112223334 566555554432221 3456777766543 33222111000000
Q ss_pred cceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc
Q 001895 334 RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 334 R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
......++. ++++++.++.++ ...||.+|+... +..+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 000122222 567666665432 356999997766 55554
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=81.09 E-value=8.3 Score=42.18 Aligned_cols=151 Identities=15% Similarity=0.097 Sum_probs=70.4
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc-cEEEEE-CCcEEEEEccCCCCCCCCeEEEEEC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG-HVMALV-GQRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~-h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
++..++.|+.. ..+.+||+.+.. -...- ...... .+++.. .+..+++.||.++ .+..||+
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~--~~~~~-----~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~ 211 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKA--VLKSY-----NAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDT 211 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTE--EEEEE-----CCCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc--EEEEE-----cCCCCCEEEEEEccCCCceeeeeccCC-----ceEEEEC
Confidence 44666667642 468999998752 22111 111111 122222 2324777777765 4777888
Q ss_pred CCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001895 262 AAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (999)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsa 339 (999)
.+. +-........ ......++... ++.+++.|+.++. +..++..+. +-.... .+ ....-.++
T Consensus 212 ~~~--~~~~~~~~~~---~~~~v~~v~~sp~~~~~la~g~~d~~------i~~wd~~~~-~~~~~~-~~---~~~~v~~l 275 (357)
T 4g56_B 212 RKP--KPATRIDFCA---SDTIPTSVTWHPEKDDTFACGDETGN------VSLVNIKNP-DSAQTS-AV---HSQNITGL 275 (357)
T ss_dssp TSS--SCBCBCCCTT---CCSCEEEEEECTTSTTEEEEEESSSC------EEEEESSCG-GGCEEE-CC---CSSCEEEE
T ss_pred CCC--ceeeeeeecc---ccccccchhhhhcccceEEEeecccc------eeEEECCCC-cEeEEE-ec---cceeEEEE
Confidence 765 2111111111 01122233332 4667777776542 333333322 101111 11 11112233
Q ss_pred EEE-C-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
++. + .++++.|+.+ ..|.+||..+.+-..
T Consensus 276 ~~sp~~~~~lasgs~D---------~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 276 AYSYHSSPFLASISED---------CTVAVLDADFSEVFR 306 (357)
T ss_dssp EECSSSSCCEEEEETT---------SCEEEECTTSCEEEE
T ss_pred EEcCCCCCEEEEEeCC---------CEEEEEECCCCcEeE
Confidence 332 3 4677777653 248889999887554
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=80.58 E-value=1e+02 Score=36.59 Aligned_cols=83 Identities=8% Similarity=-0.003 Sum_probs=46.5
Q ss_pred CCEEEEEcccC---------CCCCCcCcEEEEecCCCCCceEEEeecCCCCC--CCcccEEEEE---CCc--EEEEEccC
Q 001895 184 GTMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG--PRYGHVMALV---GQR--YLMAIGGN 247 (999)
Q Consensus 184 g~~iyv~GG~~---------~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~--~R~~h~~~v~---~~~--~Lyv~GG~ 247 (999)
.+.||+--|.. .+..+...++.+|..+...+|+.-....+.-- .-....++-. ++. .+++.+..
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECT
T ss_pred CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECC
Confidence 45777765532 12234568999999998778987542211100 0011122221 221 45665655
Q ss_pred CCCCCCCeEEEEECCCCCceEEEc
Q 001895 248 DGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 248 ~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
++ .++++|..+....|..-
T Consensus 332 ~G-----~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 332 NG-----IVYTLDRTDGALVSANK 350 (599)
T ss_dssp TS-----EEEEEETTTCCEEEEEE
T ss_pred Cc-----EEEEEECCCCCEeeccc
Confidence 44 68999998887788753
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=80.28 E-value=60 Score=33.96 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=47.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+..+|+.+..-...-... ... -.++... ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 36 ~v~lWd~~~~~~~~~~~~~---~~~-v~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVT---ETP-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp EEEEEETTTTEEEEEEECC---SSC-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred cEEEEECCCCceeEEeecc---CCc-EEEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 6788898877543321110 101 1122222 3455666664 2578999998753 122222 1 1111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333444445777787775 5777887654
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=80.17 E-value=1.1 Score=53.16 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=43.1
Q ss_pred cCCeEEEecCCCCH--------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-----HHHH
Q 001895 697 KAPIKIFGDLHGQF--------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETI 751 (999)
Q Consensus 697 ~~~i~vvGDiHG~~--------------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl 751 (999)
+-.|+.+.|+||++ ..|..+++.+.-.... .-+|+.||+++..+.+ ..++
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHH
Confidence 34589999999874 4455566554321111 1467799999987543 4456
Q ss_pred HHHHHhhhcCCCCEEEecCCccc
Q 001895 752 TLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.+|-++.. -++..||||.
T Consensus 100 ~~ln~lg~-----d~~~~GNHEf 117 (546)
T 4h2g_A 100 HFMNALRY-----DAMALGNHEF 117 (546)
T ss_dssp HHHHHHTC-----SEEECCGGGG
T ss_pred HHHHhcCC-----cEEeccCccc
Confidence 66655532 2567899996
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 999 | ||||
| d1jk7a_ | 294 | d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human | 1e-105 | |
| d3c5wc1 | 288 | d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt | 3e-98 | |
| d1auia_ | 473 | d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc | 2e-94 | |
| d1s95a_ | 324 | d.159.1.3 (A:) Serine/threonine protein phosphatas | 7e-89 | |
| d1g5ba_ | 219 | d.159.1.3 (A:) lambda ser/thr protein phosphatase | 5e-14 | |
| d1nnwa_ | 251 | d.159.1.5 (A:) Hypothetical protein PF1291 {Archae | 5e-13 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 6e-11 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 2e-05 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 1e-04 | |
| d1su1a_ | 184 | d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia | 3e-08 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 3e-04 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Score = 326 bits (838), Expect = e-105
Identities = 140/313 (44%), Positives = 194/313 (61%), Gaps = 20/313 (6%)
Query: 641 QMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPI 700
+++I+S+ I LL+ RG KP + L NEI LC + IF S+P +L+L+AP+
Sbjct: 1 KLNIDSI----IQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPL 54
Query: 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE 760
KI GD+HGQ+ DL+RLF+ G P +YLFLGDYVDRG+ SLETI LLLA K++
Sbjct: 55 KICGDIHGQYYDLLRLFEYGGFPPE------SNYLFLGDYVDRGKQSLETICLLLAYKIK 108
Query: 761 YPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKI 820
YP N L+RGNHE A IN ++GF EC R + W FN LP+AA++++KI
Sbjct: 109 YPENFFLLRGNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKI 164
Query: 821 ICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880
C HGG+ + +EQI + RP + + L DLLWSDP ++ V G N RG
Sbjct: 165 FCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVS-F 220
Query: 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL 940
TFG + V +F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ +
Sbjct: 221 TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSV 280
Query: 941 GRDLVVVPKLIHP 953
L+ +++ P
Sbjct: 281 DETLMCSFQILKP 293
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 308 bits (791), Expect = 3e-98
Identities = 109/285 (38%), Positives = 161/285 (56%), Gaps = 14/285 (4%)
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIA 730
L +++ LC+ A+ I + E +V +++ P+ + GD+HGQF DLM LF G
Sbjct: 18 LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT---- 73
Query: 731 YIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIER 790
+YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGNHE+ I ++GF EC+ +
Sbjct: 74 --NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRK 131
Query: 791 MGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850
G + W LF++LPL AL++ +I C+HGG+ SI+ ++ I L R +
Sbjct: 132 YGNAN---VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPH-E 187
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
+ DLLWSDP + G + RG G TFG D F + N L L+ RAH+ VM+G+
Sbjct: 188 GPMCDLLWSDPDDRG---GWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGY 243
Query: 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955
+++T+FSA NYC N AI+ L L P P
Sbjct: 244 NWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Score = 305 bits (783), Expect = 2e-94
Identities = 103/318 (32%), Positives = 153/318 (48%), Gaps = 31/318 (9%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 33 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 92
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 93 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 146
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 147 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 202
Query: 841 QRPITMEAGSIVLMDLLWSDPTENDSVEGLR-----PNARGPGLVTFGPDRVMEFCNNND 895
R A + D+LWSDP E+ E + RG + V EF +N+
Sbjct: 203 DRFKEPPAYGP-MCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHNN 260
Query: 896 LQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL----- 944
L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 261 LLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQ 320
Query: 945 ---VVVPKLIHPLPPAIS 959
P + +
Sbjct: 321 FNCSPHPYWLPNFMDVFT 338
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 285 bits (730), Expect = 7e-89
Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 20/291 (6%)
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSPSTA 726
L + + + S ++++ I + GD HGQF DL+ +F+ G PS
Sbjct: 29 LHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSET 88
Query: 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIE 786
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E
Sbjct: 89 NP-----YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGE 143
Query: 787 CIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG-IGRSINHVEQIENLQRPIT 845
+ + + +F WLPLA I K++ MHGG ++ I ++R
Sbjct: 144 VKAKYTA----QMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQ 199
Query: 846 MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905
S + DLLWSDP + G + RG FGPD F N+L I+R+HE
Sbjct: 200 PPD-SGPMCDLLWSDPQPQN---GRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEV 254
Query: 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLP 955
+G+E G +T+FSA NYC N + + L G DL +P
Sbjct: 255 KAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVP 305
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Score = 70.3 bits (171), Expect = 5e-14
Identities = 41/213 (19%), Positives = 71/213 (33%), Gaps = 39/213 (18%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + GDLHG + +LM D G + + +GD VDRG ++E + L
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLEL------ 63
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH----------RINRLFNW 809
+RGNHE I+ L + G W ++ + +
Sbjct: 64 ITFPWFRAVRGNHEQMMIDGLSERG--NVNHWLLNGGGWFFNLDYDKEILAKALAHKADE 121
Query: 810 LPLA---ALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS 866
LPL +KK + H + + Q+ +W+ ++S
Sbjct: 122 LPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQV-------------IWNRERISNS 168
Query: 867 VEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
G+ +G FG ++ + I
Sbjct: 169 QNGIVKEIKGADTFIFGHTPAVKPLKFANQMYI 201
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 67.8 bits (164), Expect = 5e-13
Identities = 18/139 (12%), Positives = 35/139 (25%), Gaps = 7/139 (5%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
+ + ++ G L Y LG+ V + E I ++ L
Sbjct: 2 YVAVLANIAGNLPALTAALSRIEE-MREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT 60
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG----IWAWHRINRLFNWLPLAA 814
NV +IRG ++ + E G +
Sbjct: 61 --KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLR 118
Query: 815 LIEKKIICMHGGIGRSINH 833
+ ++ GG +
Sbjct: 119 DLPIYLVDKIGGNEVFGVY 137
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (149), Expect = 6e-11
Identities = 44/293 (15%), Positives = 60/293 (20%), Gaps = 66/293 (22%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
+ + + Y+ W R+ PR+ VG ++ GG + D L
Sbjct: 16 QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSAL 72
Query: 207 DLTQQRPRWHRVV--------------------------------------------VQG 222
D
Sbjct: 73 DCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV 132
Query: 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282
R V V R L A+GG DG L +
Sbjct: 133 APMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT------AMNTIR 186
Query: 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342
+ GG D + D E R
Sbjct: 187 SGAGVCVLHNCIYAAGGYDGQDQ-----LNSVERYDVETETWTFVAPMKHRRSALGITVH 241
Query: 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAA 395
R++V LGG SV D W S VT +GR A
Sbjct: 242 QGRIYV----LGGYDGHTFLDSVECYDPDTDTW----SEVTRMTSGRSGVGVA 286
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (104), Expect = 2e-05
Identities = 40/275 (14%), Positives = 63/275 (22%), Gaps = 37/275 (13%)
Query: 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242
VG ++ GG LS L + + W R+ PR G +VG L
Sbjct: 3 VGRLIYTAGGYFRQSLS--YLEAYNPSNGT--WLRL---ADLQVPRSGLAGCVVGGL-LY 54
Query: 243 AIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302
A+GG + + P + P +
Sbjct: 55 AVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC- 113
Query: 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG--RMVE 360
+ + + + + R +N L+ GG G E
Sbjct: 114 ------IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAE 167
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVEL----------------- 403
+S A G D +L
Sbjct: 168 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 227
Query: 404 ---TRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLV 435
RR I++ GG G LD +
Sbjct: 228 PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVEC 262
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 12/132 (9%)
Query: 142 GIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAE 201
G CY N+W IT + + V+ I AG
Sbjct: 156 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAG---------VCVLHNCIYAAGGYDG 206
Query: 202 DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261
+ + + P R + + R + +GG DG L V D
Sbjct: 207 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGR-IYVLGGYDGHTFLDSVECYDP 265
Query: 262 AAKPYEWRKLEP 273
W ++
Sbjct: 266 DTD--TWSEVTR 275
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Score = 52.3 bits (124), Expect = 3e-08
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 16/156 (10%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITL----LL 755
+ D+HG R+ + + + LGD ++ G + ++
Sbjct: 4 LMFASDIHGSLPATERVLELFAQSG------AQWLVILGDVLNHGPRNALPEGYAPAKVV 57
Query: 756 ALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAAL 815
E + V +RGN ++ L F I + + + LF L AL
Sbjct: 58 ERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPAL 117
Query: 816 IEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSI 851
+ ++ H+ E GS+
Sbjct: 118 NQNDVLVYGHT------HLPVAEQRGEIFHFNPGSV 147
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 42.1 bits (97), Expect = 3e-04
Identities = 43/318 (13%), Positives = 73/318 (22%), Gaps = 33/318 (10%)
Query: 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTP 174
R++++ N A G+P G +D T S T
Sbjct: 32 RVLMWSS----YRNDAFGGSP-----------GGITLTSSWDPSTGIVSDRTVTVTKHDM 76
Query: 175 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234
++ +V+ GG S D Q
Sbjct: 77 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTI 136
Query: 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294
+ + P + W AK + +G +A G +
Sbjct: 137 GGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY-RSDNHAWLFGWKKGSV 195
Query: 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 354
G A + S G + + G S R V A+
Sbjct: 196 FQAGPSTAMNWYYTS---------GSGDV-KSAGKRQSNRGVAPDAMCGN--AVMYDAVK 243
Query: 355 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414
G + T + + + S + + R +
Sbjct: 244 GKILT-----FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP 298
Query: 415 GDLIFIYGGLRGGVLLDD 432
FI GG R G+ +D
Sbjct: 299 DGSTFITGGQRRGIPFED 316
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 999 | |||
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 100.0 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 100.0 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 100.0 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.95 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.81 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 99.78 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.53 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.1 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.61 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.55 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 98.25 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.21 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.12 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.05 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 96.93 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 96.8 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 96.43 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 95.58 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 94.75 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 94.34 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 91.83 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 91.37 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 90.79 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.79 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 90.65 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 85.84 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 85.58 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 84.56 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 83.82 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 83.23 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 82.76 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=100.00 E-value=1e-75 Score=636.10 Aligned_cols=291 Identities=47% Similarity=0.842 Sum_probs=275.4
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
+|++|++|+..+.+++.. ...|+++||.+||++|+++|++||+++++++|++|||||||||.||+++|+..|+|+..
T Consensus 4 id~~i~~l~~~~~~~~~~--~~~l~~~~i~~l~~~a~~i~~~e~~ll~i~~pv~VvGDiHG~~~DL~~if~~~g~p~~~- 80 (294)
T d1jk7a_ 4 IDSIIQRLLEVRGSKPGK--NVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 80 (294)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTSS-
T ss_pred HHHHHHHHHhccCCCCCc--ccCCCHHHHHHHHHHHHHHHHhCCCEEEecCCeEEEEECCCChHhHHHHHhhcCCCccc-
Confidence 688999999876555432 44689999999999999999999999999999999999999999999999999999876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+. .+|+.++++|
T Consensus 81 -----~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~y~~----~i~~~~~~~F 151 (294)
T d1jk7a_ 81 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 151 (294)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHTTSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccccccccccchhHHHhhcCH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999964 5999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+||+|++++|||||||+|.+.++++|+.+.||.+.+..+ ++.|+|||||.+ ...+|.+|.||.| +.||++++
T Consensus 152 ~~LPlaalI~~~i~cvHGGi~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~RG~g-~~fg~~~~ 227 (294)
T d1jk7a_ 152 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVLGWGENDRGVS-FTFGAEVV 227 (294)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCHHHHHTCCSSCCCCSSS-HHHHHHHCEECS--SCSSEEECTTSSS-EEECHHHH
T ss_pred hhCceeeEEcCeEEEecCcccCCccchhhhhhccCCCCCCCcc-hhhhhhhcCCcc--ccCCCCCCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887654 899999999986 4578999999999 78999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (999)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.+++++.+.++.|+|.
T Consensus 228 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~viTiFSa~nY~~~~~N~gail~i~~~~~~~~~~~~p~ 294 (294)
T d1jk7a_ 228 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (294)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTGGGTCCCCEEEEEECTTSCEEEEEECCC
T ss_pred HHHHHHCCCCEEEEcCccccCCcEEecCCcEEEEecCCCcCCCCCccEEEEEECCCCcEeEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999884
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-73 Score=617.51 Aligned_cols=284 Identities=39% Similarity=0.738 Sum_probs=270.9
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
+|++|+.+.+.+ .|++++|.+||++|+++|++||+++++++|++|||||||||+||+++|+..|.|+..
T Consensus 5 ~d~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~e~~l~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~- 73 (288)
T d3c5wc1 5 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 73 (288)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEEeCCCeEEEeeCCCCHHHHHHHHHhcCCCccc-
Confidence 788999997653 478999999999999999999999999999999999999999999999999998876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||+.||.++||.. .+|..++++|
T Consensus 74 -----~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~~~~~~gF~~E~~~ky~~~---~i~~~~~~~F 145 (288)
T d3c5wc1 74 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 145 (288)
T ss_dssp -----CEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHHSSS---HHHHHHHHHH
T ss_pred -----eEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCcccccccccCcchhhhhhcCcH---HHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999863 6999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+||+|+++||||||||++.+.++++|+.+.||.+.+... ++.|+|||||.. ..+|.+|.||.| +.||++++
T Consensus 146 ~~LPlaaiI~~~i~cvHGGi~~~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~rg~g-~~fg~~~~ 220 (288)
T d3c5wc1 146 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDIS 220 (288)
T ss_dssp TTSCSEEEETTTEEEESSCCCTTCSSHHHHHHSCCSSSCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHHH
T ss_pred hhccceEEecCeEEEecccccCCccchhhHhhcccccCCCccc-cccccccCCccc---CCCCccCCCCCe-eecCHHHH
Confidence 9999999999999999999999999999999999999887654 899999999975 468999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 955 (999)
++||++||+++||||||++++||++.+++||||||||||||+..+|.||+|.|++++++++..++|.|
T Consensus 221 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~kviTiFSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~p~p 288 (288)
T d3c5wc1 221 ETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288 (288)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEEGGGTEEEEBCCTTGGGTSCCCEEEEEECTTCCEEEEEECCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCCCCeecCCCcEEEEecCCCccCCCCcceEEEEECCCCcEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999976
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-71 Score=608.94 Aligned_cols=291 Identities=32% Similarity=0.579 Sum_probs=269.3
Q ss_pred ChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCeEEEecCCCCHHHHHHHHHHh
Q 001895 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEY 720 (999)
Q Consensus 645 ~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~----~~i~vvGDiHG~~~~L~~il~~~ 720 (999)
.++++.+|+.+...+ .|+.+++.+||++|+++|++||+++++. +||+|||||||||.||+++|+..
T Consensus 13 ~~~~~~li~~~~~~~----------~l~~~~~~~ll~~~~~il~~e~~l~~i~~~~~~pv~VvGDiHGq~~DL~~if~~~ 82 (324)
T d1s95a_ 13 ISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELN 82 (324)
T ss_dssp HHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeecCCCCCEEEEEECCCCHHHHHHHHHHC
Confidence 467889999886542 5789999999999999999999999984 69999999999999999999999
Q ss_pred CCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhh
Q 001895 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAW 800 (999)
Q Consensus 721 g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~ 800 (999)
|+|+... +|||||||||||++|+||+.+|++||++||++|++||||||+..++..|||++||..+|+. .+|
T Consensus 83 g~p~~~~-----~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~~~n~~ygF~~e~~~k~~~----~l~ 153 (324)
T d1s95a_ 83 GLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMY 153 (324)
T ss_dssp CCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCH----HHH
T ss_pred CCCCCCC-----eEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCccccccccccccchHhhhhcCH----HHH
Confidence 9998652 6999999999999999999999999999999999999999999999999999999999965 599
Q ss_pred hhhhhhhcccceeEEEcCcEEEecCCcc-CcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCc
Q 001895 801 HRINRLFNWLPLAALIEKKIICMHGGIG-RSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGL 879 (999)
Q Consensus 801 ~~~~~~f~~LPlaa~i~~~il~vHgGi~-~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~ 879 (999)
+.++++|++||+||+|++++|||||||+ +.+.++++|++++||.+.+... +++|+|||||.+. .+|.++.||.|
T Consensus 154 ~~~~~~F~~LPlaa~I~~~ilcvHGGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dlLWSDP~~~---~~~~~~~Rg~g- 228 (324)
T d1s95a_ 154 ELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQ---NGRSISKRGVS- 228 (324)
T ss_dssp HHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSSCCSSS-HHHHHHHCEECSS---SSEEECTTSSS-
T ss_pred HHHHHHHhhcchhhhccCcEEEecCCcCccccCCHHHHHhccCCCCCcchh-hhhhhhccCcccc---CCcCcCCCCCc-
Confidence 9999999999999999999999999996 4688999999999999887654 8999999999863 67899999999
Q ss_pred eeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEc-CCceEEeEEeccCCCCC
Q 001895 880 VTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAI 958 (999)
Q Consensus 880 ~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~~ 958 (999)
+.||++++++||++||+++||||||++++||+++++++|||||||+|||+..+|.||+|.|+ +++.+.++.|.|+|...
T Consensus 229 ~~FG~~~~~~Fl~~n~l~lIIR~He~v~~G~~~~~~~kviTvFSa~nY~~~~~N~~a~l~i~~~~~~~~~~~f~~~p~p~ 308 (324)
T d1s95a_ 229 CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 308 (324)
T ss_dssp EEECHHHHHHHHHHHTCCEEEECCSCCTTSEEEEGGGTEEEECCCSSGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred CCcCHHHHHHHHHHcCCcEEEEcCccccCceEEecCCcEEEEeCCCccCCCCCcceEEEEEECCCceeEEEEecCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999996 55889999999987665
Q ss_pred C
Q 001895 959 S 959 (999)
Q Consensus 959 ~ 959 (999)
.
T Consensus 309 ~ 309 (324)
T d1s95a_ 309 V 309 (324)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-70 Score=616.17 Aligned_cols=292 Identities=37% Similarity=0.621 Sum_probs=267.1
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++.+.+++++.+ .|+++++++||++|+++|++||+|++|.+|++|||||||||.||++||+..|.|+..
T Consensus 30 ~~~l~~hf~~eg----------rl~~~~~l~li~~a~~il~~Epnll~i~~Pv~VvGDIHGq~~DLl~If~~~G~P~~~- 98 (473)
T d1auia_ 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (473)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCCCCHHHHHHHHHHcCCCCcc-
Confidence 466777777643 578999999999999999999999999999999999999999999999999999876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+|||.+|++||+.||++|++||||||++.++..|||+.||..+|++ .+|+.++++|
T Consensus 99 -----~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~~~n~~ygF~~E~~~ky~~----~iy~~~~~~F 169 (473)
T d1auia_ 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 169 (473)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccHhhhcccccHHHHHHhhcH----HHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999999975 5999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC----CCCCc-cCCCCCCceee
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLR-PNARGPGLVTF 882 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~----~~~~~-~n~rg~~~~~f 882 (999)
++||+||+|+++||||||||+|.+.++++|+.+.||.+++..+ +++|+|||||.+... ..+|. .+.||+| +.|
T Consensus 170 ~~LPLAAiI~~kifcVHGGIsp~l~~l~dI~~I~R~~e~p~~~-~~~DLLWSDP~~~~~~~~~~~~~~~ns~RG~g-~~F 247 (473)
T d1auia_ 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (473)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred ccchhhhhhcCcEEEeeccCCCccCchhhhhhcccccCCCCcC-ceeeeeccCCcccccccccccccccCCCCCCE-EEE
Confidence 9999999999999999999999999999999999999988765 899999999986421 12333 3579999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCCe------EEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~------~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
|++++++||++||+++||||||++++||+++++++ |||||||||||+.++|+||||+++++ .+.++.|.+.|.
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~Gy~~~~~~~~~~~~~viTVFSApnYc~~~nN~aavl~~~~~-~~~i~qf~~~~h 326 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 326 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchhhhhhhhcCCccCCCCCEEEEcCCCCcCCCcCCeeEEEeecCC-CcceEEecCCCC
Confidence 99999999999999999999999999999999987 99999999999999999999999876 588899988776
Q ss_pred CCCCCC
Q 001895 957 AISSPE 962 (999)
Q Consensus 957 ~~~~~~ 962 (999)
.+..|.
T Consensus 327 p~~~p~ 332 (473)
T d1auia_ 327 PYWLPN 332 (473)
T ss_dssp CCCCGG
T ss_pred cccccc
Confidence 664443
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-33 Score=299.89 Aligned_cols=261 Identities=20% Similarity=0.335 Sum_probs=224.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||||||.... .++++++||+.+++|+++..+ |.+|.+|++++++++|||+||
T Consensus 4 g~~iyv~GG~~~~----------------------~~~~~~~yd~~t~~W~~~~~~---p~~R~~~~~~~~~~~iyv~GG 58 (288)
T d1zgka1 4 GRLIYTAGGYFRQ----------------------SLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGG 58 (288)
T ss_dssp CCCEEEECCBSSS----------------------BCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEECCcCCC----------------------CCceEEEEECCCCeEEECCCC---CCccceeEEEEECCEEEEEeC
Confidence 6789999997531 678999999999999999765 899999999999999999999
Q ss_pred cCCC---CCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEE
Q 001895 193 IGPA---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269 (999)
Q Consensus 193 ~~~~---~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~ 269 (999)
.+.. ....+++|+||+.++ +|+.++ ++|.+|++|+++++++ ++|++||.++...++++++||+.+. +|.
T Consensus 59 ~~~~~~~~~~~~~~~~yd~~~~--~w~~~~---~~p~~r~~~~~~~~~~-~i~~~gg~~~~~~~~~~~~~~~~~~--~~~ 130 (288)
T d1zgka1 59 RNNSPDGNTDSSALDCYNPMTN--QWSPCA---PMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERD--EWH 130 (288)
T ss_dssp EEEETTEEEECCCEEEEETTTT--EEEECC---CCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTT--EEE
T ss_pred cccCCCCccccchhhhcccccc--cccccc---cccceecceeccccce-eeEEecceecccccceeeeeccccC--ccc
Confidence 7532 345689999999986 599987 8999999999999998 8999999998889999999999999 999
Q ss_pred EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEE
Q 001895 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349 (999)
Q Consensus 270 ~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~ 349 (999)
....... +| ..++++..++++|++||.+... ...+++.|+..++ +|...... +.++..|+++.++++|+++
T Consensus 131 ~~~~~~~---~r-~~~~~~~~~~~~~~~GG~~~~~-~~~~~~~~d~~~~---~~~~~~~~-~~~~~~~~~~~~~~~i~i~ 201 (288)
T d1zgka1 131 LVAPMLT---RR-IGVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERN---EWRMITAM-NTIRSGAGVCVLHNCIYAA 201 (288)
T ss_dssp ECCCCSS---CC-BSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEE
T ss_pred ccccccc---cc-ccceeeeeeecceEecCccccc-ccceEEEeecccc---cccccccc-ccccccccccceeeeEEEe
Confidence 8766543 34 4445556699999999987654 5778999999876 67766654 6788999999999999999
Q ss_pred cCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcC
Q 001895 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVL 429 (999)
Q Consensus 350 GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~ 429 (999)
||.+.... .++++.||+.+.+|..+... |.+|..|++++++++||||||.++...
T Consensus 202 GG~~~~~~----~~~~~~~~~~~~~~~~~~~~---------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~ 256 (288)
T d1zgka1 202 GGYDGQDQ----LNSVERYDVETETWTFVAPM---------------------KHRRSALGITVHQGRIYVLGGYDGHTF 256 (288)
T ss_dssp CCBCSSSB----CCCEEEEETTTTEEEECCCC---------------------SSCCBSCEEEEETTEEEEECCBCSSCB
T ss_pred cCcccccc----ccceeeeeecceeeecccCc---------------------cCcccceEEEEECCEEEEEecCCCCee
Confidence 99876543 78999999999999998766 679999999999999999999999999
Q ss_pred cCcEEEeeccc
Q 001895 430 LDDLLVAEDLA 440 (999)
Q Consensus 430 l~Dv~~ld~~~ 440 (999)
++++|++|...
T Consensus 257 ~~~v~~yd~~~ 267 (288)
T d1zgka1 257 LDSVECYDPDT 267 (288)
T ss_dssp CCEEEEEETTT
T ss_pred cceEEEEECCC
Confidence 99999998664
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-31 Score=286.90 Aligned_cols=255 Identities=22% Similarity=0.350 Sum_probs=216.1
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
...+.|.||++|+++.+ +++||||||........ ..++++|+||+.+++|+
T Consensus 33 ~~~~~p~~R~~~~~~~~------------~~~iyv~GG~~~~~~~~-----------------~~~~~~~~yd~~~~~w~ 83 (288)
T d1zgka1 33 RLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDGN-----------------TDSSALDCYNPMTNQWS 83 (288)
T ss_dssp ECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTEE-----------------EECCCEEEEETTTTEEE
T ss_pred ECCCCCCccceeEEEEE------------CCEEEEEeCcccCCCCc-----------------cccchhhhccccccccc
Confidence 34578999999999998 78999999975322100 16789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA 243 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv 243 (999)
.+.++ |.+|.+|+++++++++|++||... ....++.++||+.+. +|...+ .++.+|++|+++++.+ .+|+
T Consensus 84 ~~~~~---p~~r~~~~~~~~~~~i~~~gg~~~-~~~~~~~~~~~~~~~--~~~~~~---~~~~~r~~~~~~~~~~-~~~~ 153 (288)
T d1zgka1 84 PCAPM---SVPRNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEPERD--EWHLVA---PMLTRRIGVGVAVLNR-LLYA 153 (288)
T ss_dssp ECCCC---SSCCBTCEEEEETTEEEEECCEET-TEECCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEE
T ss_pred ccccc---cceecceeccccceeeEEecceec-ccccceeeeeccccC--cccccc---ccccccccceeeeeee-cceE
Confidence 99876 799999999999999999999853 345688999999885 598876 7889999999999987 8999
Q ss_pred EccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 244 IGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 244 ~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
+||.+.....+++++||+.++ +|........ .+.++++...+++++++||.+... .+++.+.|+..++ +|
T Consensus 154 ~GG~~~~~~~~~~~~~d~~~~--~~~~~~~~~~----~~~~~~~~~~~~~i~i~GG~~~~~-~~~~~~~~~~~~~---~~ 223 (288)
T d1zgka1 154 VGGFDGTNRLNSAECYYPERN--EWRMITAMNT----IRSGAGVCVLHNCIYAAGGYDGQD-QLNSVERYDVETE---TW 223 (288)
T ss_dssp ECCBCSSCBCCCEEEEETTTT--EEEECCCCSS----CCBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTT---EE
T ss_pred ecCcccccccceEEEeecccc--cccccccccc----ccccccccceeeeEEEecCccccc-cccceeeeeecce---ee
Confidence 999998888999999999999 9998876544 345556667799999999988765 6789999998877 77
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVEL 403 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p 403 (999)
...... |.+|..|++++++++|||+||.+... ..+++|+||+++++|+.+..+ |
T Consensus 224 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p 277 (288)
T d1zgka1 224 TFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM---------------------T 277 (288)
T ss_dssp EECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC---------------------S
T ss_pred ecccCc-cCcccceEEEEECCEEEEEecCCCCe----ecceEEEEECCCCEEEECCCC---------------------C
Confidence 777654 78999999999999999999987654 378999999999999999988 7
Q ss_pred CCcceeEEEE
Q 001895 404 TRRCRHAAAA 413 (999)
Q Consensus 404 ~~R~~hsa~~ 413 (999)
.+|++|++++
T Consensus 278 ~~R~~~~~~~ 287 (288)
T d1zgka1 278 SGRSGVGVAV 287 (288)
T ss_dssp SCCBSCEEEE
T ss_pred CCcEeEEEEE
Confidence 7999999876
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.95 E-value=1.6e-26 Score=260.90 Aligned_cols=275 Identities=16% Similarity=0.137 Sum_probs=196.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQG 191 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~G 191 (999)
+++||||||......... .+.+..+++||+.+++|+.+..+. .|..+..++++++ +++||++|
T Consensus 30 ~gkv~v~GG~~~~~~~~~---------------~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~~g~i~v~G 93 (387)
T d1k3ia3 30 SGRVLMWSSYRNDAFGGS---------------PGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDGNGQIVVTG 93 (387)
T ss_dssp TTEEEEEEECCCTTTCSC---------------CCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECTTSCEEEEC
T ss_pred CCEEEEEEeecCcccCCC---------------CCceeEEEEEECCCCcEeecCCCC-CCcccceeEEEEecCCcEEEee
Confidence 789999999865432110 014556889999999999876652 3444555665555 55999999
Q ss_pred ccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCC-CCCCCCeEEEEECCCCCceEEE
Q 001895 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRK 270 (999)
Q Consensus 192 G~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~-g~~~~ndv~~yDl~s~~~~W~~ 270 (999)
|.+ .+++++||+.+. +|+..+ .+|.+|+.|+++++.++++|++||.. +...++++++||+.++ +|+.
T Consensus 94 g~~-----~~~~~~yd~~~~--~w~~~~---~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~ 161 (387)
T d1k3ia3 94 GND-----AKKTSLYDSSSD--SWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK--TWTS 161 (387)
T ss_dssp SSS-----TTCEEEEEGGGT--EEEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT--EEEE
T ss_pred cCC-----CcceeEecCccC--cccccc---cccccccccceeeecCCceeeeccccccccccceeeeecCCCC--ceee
Confidence 864 267999999996 599876 89999999999999877999999975 4556899999999999 9998
Q ss_pred cccCCCCC-----------------------------------------------------------CCccceEEEEE--
Q 001895 271 LEPEGEGP-----------------------------------------------------------PPCMYATASAR-- 289 (999)
Q Consensus 271 v~~~~~~P-----------------------------------------------------------~~r~~~~a~~~-- 289 (999)
+......+ +..+.+.++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (387)
T d1k3ia3 162 LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA 241 (387)
T ss_dssp ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET
T ss_pred cCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeec
Confidence 75432110 00111222222
Q ss_pred eCCEEEEEeccCCCCCC----cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCC--CcccC
Q 001895 290 SDGLLLLCGGRDASSVP----LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR--MVEDS 362 (999)
Q Consensus 290 ~~~~LyvfGG~~~~~~~----~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~--~~~~~ 362 (999)
.++++|+|||....... ......+.......|.|.....+ |.+|..|+++++ +++|||+||...... .....
T Consensus 242 ~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 242 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred cCCceEEEEeccCCCCCcccceeecccccccccCCCceeecccc-ccccccceeeeccCCeEEEECCcccCccCCCCcEe
Confidence 36899999997543321 12223333333446678777665 789999988887 679999999864321 11336
Q ss_pred CeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCC-CC--cCcCcEEEee
Q 001895 363 SSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLR-GG--VLLDDLLVAE 437 (999)
Q Consensus 363 ~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~-~~--~~l~Dv~~ld 437 (999)
+.+++||+++++|+.+..+ +.+|++|+++++ +++|||+||.. ++ ....++++++
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~---------------------~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~ 379 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFT 379 (387)
T ss_dssp CCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEE
T ss_pred ceEEEEECCCCeEEECCCC---------------------CCcccceEEEEECCCCEEEEEeCCCcCCCCcccceEEEEc
Confidence 6899999999999999877 679999998877 78999999942 22 3566778776
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.81 E-value=9.4e-19 Score=196.46 Aligned_cols=235 Identities=14% Similarity=0.216 Sum_probs=163.5
Q ss_pred CCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecC
Q 001895 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (999)
Q Consensus 88 ~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~ 167 (999)
.|..++.|+.+.+. +++||++||.. .+++++||+.+++|+.+..
T Consensus 72 ~~~~~~~~~~~~~~-----------~g~i~v~Gg~~-------------------------~~~~~~yd~~~~~w~~~~~ 115 (387)
T d1k3ia3 72 TKHDMFCPGISMDG-----------NGQIVVTGGND-------------------------AKKTSLYDSSSDSWIPGPD 115 (387)
T ss_dssp CSCCCSSCEEEECT-----------TSCEEEECSSS-------------------------TTCEEEEEGGGTEEEECCC
T ss_pred CCcccceeEEEEec-----------CCcEEEeecCC-------------------------CcceeEecCccCccccccc
Confidence 44455566666653 67899999863 2468899999999999877
Q ss_pred CCCCCCCCcCcEEEEeC-CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC-----------------------
Q 001895 168 FGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP----------------------- 223 (999)
Q Consensus 168 ~g~~P~pR~~hsa~~~g-~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~----------------------- 223 (999)
+ |.+|.+|+++++. +++|++||........+++++||+.++ +|+.++....
T Consensus 116 ~---~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (387)
T d1k3ia3 116 M---QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW 190 (387)
T ss_dssp C---SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC
T ss_pred c---cccccccceeeecCCceeeeccccccccccceeeeecCCCC--ceeecCCCcccccccccccceeeccceeEEEEe
Confidence 6 7899999999985 599999998777778899999999986 4987652110
Q ss_pred -------------------------------------CCCCCcccEEEEE-CCcEEEEEccCCCCCC---CCeEEEEECC
Q 001895 224 -------------------------------------GPGPRYGHVMALV-GQRYLMAIGGNDGKRP---LADVWALDTA 262 (999)
Q Consensus 224 -------------------------------------~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~---~ndv~~yDl~ 262 (999)
.+..++++++... .++++|++||...... ......++..
T Consensus 191 ~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~ 270 (387)
T d1k3ia3 191 KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLG 270 (387)
T ss_dssp GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECC
T ss_pred CCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeeccccc
Confidence 1112222222221 2347999999754322 2223333332
Q ss_pred ---CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC-----CCCcccEEEEecCCCCeEEEEECCCCCCCCc
Q 001895 263 ---AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS-----SVPLASAYGLAKHRDGRWEWAIAPGVSPSPR 334 (999)
Q Consensus 263 ---s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~-----~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R 334 (999)
.....|+.+..+ |.+|..|++++..+++||++||.... ...+..++.||+.++ +|...+.+ |.+|
T Consensus 271 ~~~~~~~~~~~~~~~---p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~---~W~~~~~~-~~~R 343 (387)
T d1k3ia3 271 EPGTSPNTVFASNGL---YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPN-SIVR 343 (387)
T ss_dssp STTSCCEEEECTTCC---SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCC-SSCC
T ss_pred ccccCCCceeecccc---ccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCC---eEEECCCC-CCcc
Confidence 222266665554 55688888888889999999997532 234567889999888 77777665 7899
Q ss_pred ceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECC
Q 001895 335 YQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (999)
Q Consensus 335 ~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~ 371 (999)
..|+++++ +++|||+||....... ....++++|||-
T Consensus 344 ~~Hs~a~l~~dG~v~v~GG~~~~~~~-~~~~~~e~y~Pp 381 (387)
T d1k3ia3 344 VYHSISLLLPDGRVFNGGGGLCGDCT-TNHFDAQIFTPN 381 (387)
T ss_dssp CTTEEEEECTTSCEEEEECCCCTTCS-CCCCEEEEEECG
T ss_pred cceEEEEECCCCEEEEEeCCCcCCCC-cccceEEEEcch
Confidence 99998877 8899999996433321 236789999973
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=99.78 E-value=5.9e-21 Score=199.39 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=92.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|+||||||||+++|.++|+.+++++..+ ++||||||||||++|.||+.+|.. .++++|+||||.+++
T Consensus 13 ~rI~vIgDIHG~~~~L~~lL~~i~~~~~~d-----~lv~lGD~vDrGp~s~~vl~~l~~------~~~~~i~GNHE~~ll 81 (219)
T d1g5ba_ 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (219)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred CeEEEEEecccCHHHHHHHHHHcCCCCCCC-----EEEEeCCccccCccHHHHHHHhhc------cccccccCcHHHHHH
Confidence 479999999999999999999999865443 899999999999999999998744 589999999999998
Q ss_pred hhhcCChHH-HHHHhCCc-------cchhhhhhhhhhhcccceeEEE---cCcEEEecCCccCc
Q 001895 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (999)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~~ 830 (999)
+..++.... .....+.. ....+.+.+.+++..+|+...+ +.+++++|||+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~h~~~~~~ 145 (219)
T d1g5ba_ 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (219)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred HHHhccccccHHHHcCchHHhhcccchhHHHHHHHHHHHhCccccccccCCCcEEEEECCCchh
Confidence 877654321 11111111 0112234667788888887654 46899999998654
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.53 E-value=5.2e-14 Score=147.86 Aligned_cols=127 Identities=16% Similarity=0.101 Sum_probs=84.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
.|.|||||||++..|.++|+.+....... .....+||+||+||||+++.||+++|..|+.. .++++|+||||.+.+.
T Consensus 2 ~I~visDiHg~~~~l~~~l~~i~~~~~~~-~~~D~ii~~GDlvd~G~~~~evi~~l~~l~~~--~~v~~v~GNHD~~~~~ 78 (251)
T d1nnwa_ 2 YVAVLANIAGNLPALTAALSRIEEMREEG-YEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIAM 78 (251)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHHH
T ss_pred EEEEEEccccCHHHHHHHHHHHHHhhccC-CCCcEEEEecCcCCCCCCcHHHHHHHHHHhhc--CCEEEEeccHHHHHHh
Confidence 58999999999999999998763211000 00017999999999999999999999998765 4799999999998765
Q ss_pred hhcCChHHHHHHhCCc----------cchhhhhhhhhhhcccceeEEE---cCcEEEecCCcc
Q 001895 779 ALFGFRIECIERMGER----------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIG 828 (999)
Q Consensus 779 ~~~gf~~e~~~~~g~~----------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~ 828 (999)
...++........... ....+-....+++..+|..... +.+++|+||++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~ 141 (251)
T d1nnwa_ 79 SDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPI 141 (251)
T ss_dssp SCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSS
T ss_pred ccccccccchhhhhccchhHHHhhHHHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCcc
Confidence 5443221110000000 0011223445567777766433 458999999764
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.10 E-value=2.7e-10 Score=116.77 Aligned_cols=74 Identities=11% Similarity=0.125 Sum_probs=61.5
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
..|.++|||||+++.|.++++.+.....+ -+||+||++|||+.+.|+..++..|+..- -.++.|+||||....
T Consensus 6 ~~i~~~sd~hg~~eale~~~~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~~~L~~~~-~pv~~i~GNHD~~~~ 78 (228)
T d1uf3a_ 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEAH-LPTAYVPGPQDAPIW 78 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGGC-SCEEEECCTTSCSHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCccchHHHHhhhhhcccc-ceEEEEecCCCchhh
Confidence 45889999999999999999876433333 68999999999999999999998888653 369999999998654
Q ss_pred h
Q 001895 778 N 778 (999)
Q Consensus 778 ~ 778 (999)
.
T Consensus 79 ~ 79 (228)
T d1uf3a_ 79 E 79 (228)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.61 E-value=5e-09 Score=104.41 Aligned_cols=70 Identities=19% Similarity=0.363 Sum_probs=54.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--------HHHHHHHHHhhhcCCCCEEEec
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------LETITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------~evl~ll~~lk~~~P~~v~llr 769 (999)
++|.|||||||++.+|.++|+.+.....+ .+||+||+||+|+.+ .+++..+..+ ...++.++
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D------~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~ 71 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEV----AHKVIAVR 71 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT----GGGEEECC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCC------EEEEcCcccccCccchhhhccCcHHHHHHHHhc----CCcEEEec
Confidence 57899999999999999999887543333 799999999998754 3455555444 35799999
Q ss_pred CCccccch
Q 001895 770 GNHEAADI 777 (999)
Q Consensus 770 GNHE~~~~ 777 (999)
||||....
T Consensus 72 GNhD~~~~ 79 (184)
T d1su1a_ 72 GNCDSEVD 79 (184)
T ss_dssp CTTCCHHH
T ss_pred CCCCchhh
Confidence 99998543
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.55 E-value=4.8e-07 Score=88.27 Aligned_cols=63 Identities=19% Similarity=0.349 Sum_probs=48.1
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
++|.|++||||++..|.++++.+.....+ .++++||+++. +++..+..+. ..++.++||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENLN----ANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGCS----SEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCC------EEEECCCccCH-----HHHHHHhhcC----ccEEEEccccccc
Confidence 46899999999999999999876433333 79999999974 4555554442 3689999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.25 E-value=3.5e-06 Score=86.61 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=52.9
Q ss_pred cCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHH---------------------
Q 001895 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLL--------------------- 755 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~--------------------- 755 (999)
..+|++|+|||++++.|.++++.+.-...+ -+|+.||++|.+..+.+...++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D------~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~ 75 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 75 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhH
Confidence 357999999999999999998776533323 58999999998876654333222
Q ss_pred ----HhhhcCCCCEEEecCCccccc
Q 001895 756 ----ALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 756 ----~lk~~~P~~v~llrGNHE~~~ 776 (999)
.......-.++++.||||...
T Consensus 76 ~~~~~~L~~~~~pv~~i~GNHD~~~ 100 (257)
T d2yvta1 76 DKFFREIGELGVKTFVVPGKNDAPL 100 (257)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCCH
T ss_pred HHHHHHHHhcCCcEEEEeCCCcchh
Confidence 211233457999999999753
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.21 E-value=1.6e-06 Score=86.82 Aligned_cols=117 Identities=21% Similarity=0.273 Sum_probs=77.3
Q ss_pred eEEEecCCCCHHH------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcc
Q 001895 700 IKIFGDLHGQFGD------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (999)
Q Consensus 700 i~vvGDiHG~~~~------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (999)
|.||+|+||+... |.++|+.-+. + .+|++||++++ ||+.+|..+. ..+++++||||
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~v---D------~ii~~GDi~~~-----~~l~~l~~l~----~~v~~V~GN~D 67 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKI---N------YVLCTGNVCSQ-----EYVEMLKNIT----KNVYIVSGDLD 67 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTC---C------EEEECSCCCCH-----HHHHHHHHHC----SCEEECCCTTC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCC---C------EEEECCCCCCH-----HHHHHHHhhC----CCEEEEcCCCC
Confidence 7899999986433 4455543221 2 68999999974 8999888764 36899999999
Q ss_pred ccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEE--c-CcEEEecCCccCcccCHHHhhhccCCcccCCCC
Q 001895 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850 (999)
Q Consensus 774 ~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~ 850 (999)
...... ..++...||....+ + .+++++||-...
T Consensus 68 ~~~~~~-----------------------~~~~~~~lp~~~~~~~~~~~i~l~H~~~~~--------------------- 103 (193)
T d2a22a1 68 SAIFNP-----------------------DPESNGVFPEYVVVQIGEFKIGLMHGNQVL--------------------- 103 (193)
T ss_dssp CSCCBC-----------------------CGGGTBCCCSEEEEEETTEEEEEECSTTSS---------------------
T ss_pred cchhhh-----------------------hHHHHhhCCccEEEEECCEEEEEEeccCCC---------------------
Confidence 743321 11233456654433 3 367888863210
Q ss_pred ceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccc
Q 001895 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (999)
Q Consensus 851 ~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (999)
....++.+.++++..+.+++|-||.=++
T Consensus 104 -----------------------------~~~~~~~l~~~~~~~~~dvvi~GHTH~~ 131 (193)
T d2a22a1 104 -----------------------------PWDDPGSLEQWQRRLDCDILVTGHTHKL 131 (193)
T ss_dssp -----------------------------STTCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred -----------------------------CCCCHHHHHHHHhhcCCCEEEEcCccCc
Confidence 0123466778888999999999998875
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.12 E-value=5e-06 Score=82.27 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=43.1
Q ss_pred CCeEEEecCCCCHHH--HHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 698 APIKIFGDLHGQFGD--LMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~--L~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
++|.||+|+||+... |.+.+.. +.....+ .++++||+++ .|++.+|..+. ..++.++||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D------~Ii~~GDi~~-----~e~l~~l~~~~----~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCC------EEEEccCccc-----hhhHHHHHhhC----CceEEEeCCcCc
Confidence 468999999997644 2233322 2211122 6888999996 69999887764 258999999995
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.05 E-value=3.3e-05 Score=75.55 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=44.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.+|.||+|+||++..|.++++.+.- ..+ .++++||++..+...+ . ..++.++||||.
T Consensus 4 ~kI~viSD~Hgn~~al~~vl~~~~~-~~D------~iih~GD~~~~~~~~~-----------~--~~~~~V~GN~D~ 60 (173)
T d3ck2a1 4 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSELRPDSPL-----------W--EGIRVVKGNMDF 60 (173)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCSCTTCGG-----------G--TTEEECCCTTCC
T ss_pred CEEEEEeccCCCHHHHHHHHHHhhc-CCC------EEEECCcccCcccchh-----------h--cCCeEEecCccc
Confidence 4699999999999999999987632 222 6899999998765431 1 468999999995
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.93 E-value=0.00049 Score=72.93 Aligned_cols=72 Identities=22% Similarity=0.240 Sum_probs=47.4
Q ss_pred CCeEEEecCC-C------------CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhh---hcC
Q 001895 698 APIKIFGDLH-G------------QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK---VEY 761 (999)
Q Consensus 698 ~~i~vvGDiH-G------------~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk---~~~ 761 (999)
++++.++|+| | ++..|.++++.+.-...+ -+|+.||++|++.-+.+++..+..+. ...
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D------~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~ 74 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKEH 74 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHhhHHhc
Confidence 3689999999 3 234455555544322222 58889999999877777765543332 223
Q ss_pred CCCEEEecCCcccc
Q 001895 762 PNNVHLIRGNHEAA 775 (999)
Q Consensus 762 P~~v~llrGNHE~~ 775 (999)
.-.|+++.||||..
T Consensus 75 ~i~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCCCccc
Confidence 34699999999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=96.80 E-value=0.00082 Score=66.14 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=29.7
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+++|||+..+-...-+.+.+|-+| +.+.++|+||||..
T Consensus 46 ~v~~LGD~~~~~~~~~~~~~~l~~L----~g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 46 TLYHLGDFTWHFNDKNEYLRIWKAL----PGRKILVMGNHDKD 84 (188)
T ss_dssp EEEECSCCBSCSCCTTSHHHHHHHS----SSEEEEECCTTCCC
T ss_pred EEEEeCCccccCCCHHHHHHHHHHC----CCceEEEecCCCch
Confidence 6889999987644445667777666 46789999999963
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=96.43 E-value=0.0024 Score=66.22 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=46.9
Q ss_pred CCeEEEecCC---------CC---HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCE
Q 001895 698 APIKIFGDLH---------GQ---FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765 (999)
Q Consensus 698 ~~i~vvGDiH---------G~---~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v 765 (999)
+.|..|+|+| |. ...|.++++.+......-| -+|+.||++|+|. .+.+..+.++..+.+-.+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D----~vv~~GDl~~~~~--~~~y~~~~~~l~~l~~p~ 74 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD----AVVVSGDIVNCGR--PEEYQVARQILGSLNYPL 74 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS----EEEEESCCBSSCC--HHHHHHHHHHHTTCSSCE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCC----EEEECcccCcCCc--chhHHHHHHHHhccCCCE
Confidence 3588999999 22 2446666666532111100 5888999999885 345555555444556679
Q ss_pred EEecCCcccc
Q 001895 766 HLIRGNHEAA 775 (999)
Q Consensus 766 ~llrGNHE~~ 775 (999)
++++||||..
T Consensus 75 ~~i~GNHD~~ 84 (271)
T d3d03a1 75 YLIPGNHDDK 84 (271)
T ss_dssp EEECCTTSCH
T ss_pred EEEecCccch
Confidence 9999999964
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.58 E-value=0.006 Score=62.24 Aligned_cols=70 Identities=19% Similarity=0.288 Sum_probs=43.4
Q ss_pred CeEEEecCCC------C------HHHHHHHHHHhCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhcCC
Q 001895 699 PIKIFGDLHG------Q------FGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVEYP 762 (999)
Q Consensus 699 ~i~vvGDiHG------~------~~~L~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~~P 762 (999)
+|+.|.|||= . ...|.++++.+.. +..+ -+|..||+++.|... .+ ...+|..+....+
T Consensus 6 ~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD------~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~ 79 (256)
T d2hy1a1 6 VLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQLG 79 (256)
T ss_dssp EEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCS------EEEECSCCBSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCChhHHHHHHHHhhhhhhhcC
Confidence 5889999992 1 2346666665421 1112 577799999998643 12 2233433433444
Q ss_pred CCEEEecCCccc
Q 001895 763 NNVHLIRGNHEA 774 (999)
Q Consensus 763 ~~v~llrGNHE~ 774 (999)
-.+++++||||.
T Consensus 80 ~p~~~v~GNHD~ 91 (256)
T d2hy1a1 80 AELVWVMGNHDD 91 (256)
T ss_dssp CEEEECCCTTSC
T ss_pred CCEEEEcccccc
Confidence 579999999995
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=94.75 E-value=0.011 Score=60.85 Aligned_cols=72 Identities=19% Similarity=0.204 Sum_probs=47.0
Q ss_pred CeEEEecCCCC-------------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCC----CChHHHHHHHH
Q 001895 699 PIKIFGDLHGQ-------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG----QHSLETITLLL 755 (999)
Q Consensus 699 ~i~vvGDiHG~-------------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG----~~s~evl~ll~ 755 (999)
++.||+|+|=. +..|.++++.+.....+ -+|++||++|.+ ....+.+..++
T Consensus 5 ~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~D------fVv~~GDl~~~~~~~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 5 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 78 (320)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCC------EEEECCCCCCCCCcchhHHHHHHHHHH
Confidence 47899999921 33455555544322222 578899999976 33445555555
Q ss_pred HhhhcCCCCEEEecCCccccc
Q 001895 756 ALKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 756 ~lk~~~P~~v~llrGNHE~~~ 776 (999)
..-...+..++.+.||||...
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~ 99 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYN 99 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHH
T ss_pred HHHHHcCCCEEEecccCcccc
Confidence 544455678999999999754
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=94.34 E-value=0.22 Score=52.04 Aligned_cols=70 Identities=23% Similarity=0.212 Sum_probs=41.6
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccC-CCC---ChH---HHHHHHHHhhhcCCCCEEEecCC
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD-RGQ---HSL---ETITLLLALKVEYPNNVHLIRGN 771 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVD-RG~---~s~---evl~ll~~lk~~~P~~v~llrGN 771 (999)
++.|+||++-.......+.........- + -+|++||++- .|. ... +-+.++-.+....| ++.++||
T Consensus 9 ~F~v~GD~g~~~~~~~~~~~~~~~~~~p-d----fvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P--~~~~~GN 81 (312)
T d2qfra2 9 TFGLIGDLGQSFDSNTTLSHYELSPKKG-Q----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAGN 81 (312)
T ss_dssp EEEEECSCCSBHHHHHHHHHHHHCSSCC-S----EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCCG
T ss_pred EEEEEeeCCCCCchHHHHHHHHHcCCCC-C----EEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcce--EEEeccc
Confidence 4889999987777666554432211111 0 4778999972 232 111 33444444444444 8899999
Q ss_pred cccc
Q 001895 772 HEAA 775 (999)
Q Consensus 772 HE~~ 775 (999)
||..
T Consensus 82 HD~~ 85 (312)
T d2qfra2 82 HEIE 85 (312)
T ss_dssp GGTC
T ss_pred cccc
Confidence 9964
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.83 E-value=0.021 Score=58.86 Aligned_cols=23 Identities=4% Similarity=0.186 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEecccc
Q 001895 884 PDRVMEFCNNNDLQLIVRAHECV 906 (999)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~ 906 (999)
...+.+.|+++++++++-||.=.
T Consensus 200 ~~~~~~ll~~~~v~~~~~GH~H~ 222 (302)
T d1utea_ 200 VKQLLPLLTTHKVTAYLCGHDHN 222 (302)
T ss_dssp HHHTHHHHHHTTCSEEEECSSSS
T ss_pred hhhhhHHHHhcCceEEEeCCCcc
Confidence 46788899999999999999855
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=91.37 E-value=8 Score=42.81 Aligned_cols=113 Identities=16% Similarity=0.149 Sum_probs=67.6
Q ss_pred CeEEEEECCCCc--EEEecCCCC-----CCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC
Q 001895 150 ADVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
+.++.+|..|.+ |+.-..... ..........+..+++||+...- ..++.+|..+....|..-. .+
T Consensus 76 ~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------g~l~Alda~tG~~~w~~~~-~~ 147 (560)
T d1kv9a2 76 SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD-------GRLIALDAKTGKAIWSQQT-TD 147 (560)
T ss_dssp GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-------SEEEEEETTTCCEEEEEEC-SC
T ss_pred CeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEEeCC-------CEEEEEECCCCcEEeccCc-cC
Confidence 478999999875 885322110 11122334556667787776432 4689999988766787653 11
Q ss_pred CCCCCCcccEEEEECCcEEEEEccC-CCCCCCCeEEEEECCCCCceEEEcc
Q 001895 223 PGPGPRYGHVMALVGQRYLMAIGGN-DGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 223 ~~P~~R~~h~~~v~~~~~Lyv~GG~-~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
.........+-.++++ .+|+ |+. .....-..+..||..+....|+.-.
T Consensus 148 ~~~~~~~~~~p~v~~~-~viv-g~~~~~~~~~G~v~a~D~~TG~~~W~~~t 196 (560)
T d1kv9a2 148 PAKPYSITGAPRVVKG-KVII-GNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (560)
T ss_dssp TTSSCBCCSCCEEETT-EEEE-CCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred cccceeeeeeeeeecC-cccc-cccceeccccceEEEEECCCceEEeeeee
Confidence 2222233334456666 4554 443 2223345799999999988888753
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=90.79 E-value=8.9 Score=38.29 Aligned_cols=110 Identities=11% Similarity=0.071 Sum_probs=53.0
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 240 ~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++. +..++....
T Consensus 160 ~~l~sgs~d~-----~i~i~d~~~~--~~~~~~~~~~----~~i~~v~~~p~~~~l~~~~~d~~------v~~~d~~~~- 221 (311)
T d1nr0a1 160 FRIISGSDDN-----TVAIFEGPPF--KFKSTFGEHT----KFVHSVRYNPDGSLFASTGGDGT------IVLYNGVDG- 221 (311)
T ss_dssp CEEEEEETTS-----CEEEEETTTB--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------EEEEETTTC-
T ss_pred eeeccccccc-----cccccccccc--cccccccccc----ccccccccCcccccccccccccc------ccccccccc-
Confidence 5677777665 5788999876 3322221111 11122223336677777775542 333443322
Q ss_pred eEEEEECCC-CCCCC--cceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 320 RWEWAIAPG-VSPSP--RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 320 ~W~w~~~~g-~~P~~--R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+-....... ..... ..-.++++. ++++++.||.+ ..|.+||.++++-.
T Consensus 222 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~D---------g~v~iwd~~t~~~~ 273 (311)
T d1nr0a1 222 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---------KTIKIWNVATLKVE 273 (311)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTTEEE
T ss_pred cccccccccccccccccccccccccCCCCCEEEEEeCC---------CeEEEEECCCCcEE
Confidence 112211111 10010 011223332 56777777753 34889999988644
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=90.79 E-value=15 Score=40.68 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=67.8
Q ss_pred cCeEEEEECCCCc--EEEecCCCC-----CCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec
Q 001895 149 TADVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (999)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~ 221 (999)
.+.|+++|..|++ |+.-..... ........+.++.++++|+... ...++.+|..+....|..-...
T Consensus 86 ~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~-------~g~l~alda~tG~~~W~~~~~~ 158 (573)
T d1kb0a2 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFE 158 (573)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTT
T ss_pred CCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEec-------ccceeeeccccccceecccCcc
Confidence 3478999999875 875432210 0112233456667888777642 2468999998876678765422
Q ss_pred CCCCCCCcccEEEEECCcEEEEEccCCC-CCCCCeEEEEECCCCCceEEEcc
Q 001895 222 GPGPGPRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 222 g~~P~~R~~h~~~v~~~~~Lyv~GG~~g-~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
+....-....+.+++++ .+| +|+... ...-..+..||..+....|+.-.
T Consensus 159 ~~~~~~~~~~~p~v~~~-~vi-vg~~~~~~~~~G~v~a~D~~TG~~~W~~~t 208 (573)
T d1kb0a2 159 GQKGSLTITGAPRVFKG-KVI-IGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (573)
T ss_dssp TCCSSCBCCSCCEEETT-EEE-ECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCcceEEeecceEEEec-cEE-EeeccccccccceEEEEecCCccceeeeee
Confidence 22111122333456676 454 455432 22346899999999887887643
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=90.65 E-value=8.5 Score=38.95 Aligned_cols=193 Identities=12% Similarity=0.081 Sum_probs=95.1
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC-CCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG-PGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g-~~P 225 (999)
.+.+++||+.++.+..+.........-..+.++.. ++.+|+..+. +.+.++|+... ...+.... ...
T Consensus 45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~-------~~i~~~~~~g~---~~~~~~~~~~g~ 114 (314)
T d1pjxa_ 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTDGT---FEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETTSC---EEECCSBCTTSC
T ss_pred CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC-------CeEEEEeCCCc---EEEEEecccccc
Confidence 45799999999988776532101111112344444 3478877543 35888998764 33332111 111
Q ss_pred CCCcccEEEEECCcEEEEEc--cCC--------CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC---
Q 001895 226 GPRYGHVMALVGQRYLMAIG--GND--------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG--- 292 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~G--G~~--------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~--- 292 (999)
.-+.-..+++-.++.||+-- +.. .......+|++++.. ++..+...... -...+....++
T Consensus 115 ~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---~~~~~~~~~~~----pNGi~~~~d~d~~~ 187 (314)
T d1pjxa_ 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---QMIQVDTAFQF----PNGIAVRHMNDGRP 187 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---CEEEEEEEESS----EEEEEEEECTTSCE
T ss_pred ccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC---ceeEeeCCcce----eeeeEECCCCCcce
Confidence 11222345555555788852 211 112245789998854 34443321111 11122222222
Q ss_pred -EEEEEeccCCCCCCcccEEEEecCCCCeEEEE----ECCCCCCCCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEE
Q 001895 293 -LLLLCGGRDASSVPLASAYGLAKHRDGRWEWA----IAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVA 366 (999)
Q Consensus 293 -~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~----~~~g~~P~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~ 366 (999)
.||+..- ....+|.|+...++.-.+. ...+.. ...--++++ -++.|||..-. .+.|+
T Consensus 188 ~~lyv~d~------~~~~i~~~d~~~~g~~~~~~~~~~~~~~~--~~~pdGiavD~~GnlyVa~~~---------~g~I~ 250 (314)
T d1pjxa_ 188 YQLIVAET------PTKKLWSYDIKGPAKIENKKVWGHIPGTH--EGGADGMDFDEDNNLLVANWG---------SSHIE 250 (314)
T ss_dssp EEEEEEET------TTTEEEEEEEEETTEEEEEEEEEECCCCS--SCEEEEEEEBTTCCEEEEEET---------TTEEE
T ss_pred eEEEEEee------cccceEEeeccCccccceeeEEEEccccc--cccceeeEEecCCcEEEEEcC---------CCEEE
Confidence 5666532 2356777765545443322 222211 111123333 35789986321 35699
Q ss_pred EEECCCCeE
Q 001895 367 VLDTAAGVW 375 (999)
Q Consensus 367 vyD~~t~~W 375 (999)
+||+++.+.
T Consensus 251 ~~dp~~g~~ 259 (314)
T d1pjxa_ 251 VFGPDGGQP 259 (314)
T ss_dssp EECTTCBSC
T ss_pred EEeCCCCEE
Confidence 999987653
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.84 E-value=11 Score=36.65 Aligned_cols=142 Identities=9% Similarity=0.096 Sum_probs=68.5
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
...+.+||+.+.+-....... ...-.+....+.+++.|+. ...+.+||+.... ....+. ......
T Consensus 196 dg~i~~~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~l~s~s~------d~~i~iwd~~~~~-~~~~~~---~~~~~~ 260 (342)
T d2ovrb2 196 DTSIRVWDVETGNCIHTLTGH-----QSLTSGMELKDNILVSGNA------DSTVKIWDIKTGQ-CLQTLQ---GPNKHQ 260 (342)
T ss_dssp TSCEEEEETTTCCEEEEECCC-----CSCEEEEEEETTEEEEEET------TSCEEEEETTTCC-EEEEEC---STTSCS
T ss_pred CCeEEEeecccceeeeEeccc-----ccceeEEecCCCEEEEEcC------CCEEEEEeccccc-cccccc---ccceee
Confidence 346788888876644332211 1111222333345555553 2578999998753 122221 112222
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEEEeccCCCCCCc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~LyvfGG~~~~~~~~ 307 (999)
....+....+ .+++.|+.++ .+..||+.+.....+... .... .....-.++. ..++.+++.|+.++.....
T Consensus 261 ~~~~~~~~~~-~~~~s~s~Dg-----~i~iwd~~tg~~i~~~~~-~~~~-~~~~~v~~v~~s~~~~~la~g~~dGt~~~~ 332 (342)
T d2ovrb2 261 SAVTCLQFNK-NFVITSSDDG-----TVKLWDLKTGEFIRNLVT-LESG-GSGGVVWRIRASNTKLVCAVGSRNGTEETK 332 (342)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEEE-CTTG-GGTCEEEEEEECSSEEEEEEECSSSSSCCE
T ss_pred eceeecccCC-CeeEEEcCCC-----EEEEEECCCCCEEEEEec-ccCC-CCCCCEEEEEECCCCCEEEEEeCCCCCeeE
Confidence 2333334455 4777787765 588999988732222211 1110 0011122222 2456777888877654333
Q ss_pred ccEEEE
Q 001895 308 ASAYGL 313 (999)
Q Consensus 308 ~d~~~~ 313 (999)
..+|.|
T Consensus 333 l~~~Df 338 (342)
T d2ovrb2 333 LLVLDF 338 (342)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 334443
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.58 E-value=19 Score=35.71 Aligned_cols=178 Identities=13% Similarity=0.084 Sum_probs=80.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+.+||+............ .....-...+.. ++.+++.|+.. ..+.++|+.+.. .+.... .. ..
T Consensus 119 g~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d------~~i~~~~~~~~~-~~~~~~----~~-~~ 184 (337)
T d1gxra_ 119 STLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQT-LVRQFQ----GH-TD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE-EEEEEC----CC-SS
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccccc------cccccccccccc-cccccc----cc-cc
Confidence 36788898776654433221 000111122222 34555555532 468889988753 122211 11 11
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
.-.+++...++..++.|+.++ .+..||+.+. +-........ .........++.+++.|+.++.
T Consensus 185 ~v~~l~~s~~~~~~~~~~~d~-----~v~i~d~~~~--~~~~~~~~~~-----~i~~l~~~~~~~~l~~~~~d~~----- 247 (337)
T d1gxra_ 185 GASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESSN----- 247 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTSC-----
T ss_pred ccccccccccccccccccccc-----cccccccccc--eeeccccccc-----ceEEEEEcccccccceeccccc-----
Confidence 112233333335667777654 5788898776 3211111111 1111222235666667765432
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
+..++........ .... .. .-.++++. ++++++.||.+ +.|.+||..+++
T Consensus 248 -i~i~d~~~~~~~~---~~~~--~~-~i~~v~~s~~g~~l~s~s~D---------g~i~iwd~~~~~ 298 (337)
T d1gxra_ 248 -VEVLHVNKPDKYQ---LHLH--ES-CVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGA 298 (337)
T ss_dssp -EEEEETTSSCEEE---ECCC--SS-CEEEEEECTTSSEEEEEETT---------SEEEEEETTTCC
T ss_pred -ccccccccccccc---cccc--cc-ccceEEECCCCCEEEEEeCC---------CeEEEEECCCCC
Confidence 3444444332221 1111 11 11223332 56777777653 348889987764
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.56 E-value=18 Score=34.72 Aligned_cols=176 Identities=11% Similarity=0.040 Sum_probs=84.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~ 230 (999)
.+..+|..+......... ..............++.|+. ...+.++|+.... .+.. .......
T Consensus 118 ~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------d~~i~~~d~~~~~----~~~~---~~~~~~~ 179 (342)
T d2ovrb2 118 TLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET----CLHT---LQGHTNR 179 (342)
T ss_dssp EEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE----EEEE---ECCCSSC
T ss_pred eEEEeecccccceeeeec-----ccccceeeccccceeeeecC------CCeEEEeecccce----eeEE---EcCcccc
Confidence 456666666554443322 11222233334444455543 2467788887642 1211 1111222
Q ss_pred cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001895 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (999)
Q Consensus 231 h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~ 310 (999)
......++ ..++.|+.++ .+..||+.+........ ... ....++.. ++.+++.|+.++ .+
T Consensus 180 ~~~~~~~~-~~l~s~~~dg-----~i~~~d~~~~~~~~~~~--~~~-----~~v~~~~~-~~~~l~s~s~d~------~i 239 (342)
T d2ovrb2 180 VYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLT--GHQ-----SLTSGMEL-KDNILVSGNADS------TV 239 (342)
T ss_dssp EEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEEC--CCC-----SCEEEEEE-ETTEEEEEETTS------CE
T ss_pred cccccCCC-CEEEEEeCCC-----eEEEeecccceeeeEec--ccc-----cceeEEec-CCCEEEEEcCCC------EE
Confidence 33334455 4677777775 57888987762222211 111 12223333 344566676543 24
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
..++............ . ........++..++.+++.||.+ ..|.+||+++++..
T Consensus 240 ~iwd~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~s~s~D---------g~i~iwd~~tg~~i 293 (342)
T d2ovrb2 240 KIWDIKTGQCLQTLQG--P-NKHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFI 293 (342)
T ss_dssp EEEETTTCCEEEEECS--T-TSCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred EEEecccccccccccc--c-ceeeeceeecccCCCeeEEEcCC---------CEEEEEECCCCCEE
Confidence 4455443322222211 1 11222333445567777888753 34889999998754
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=83.82 E-value=11 Score=36.59 Aligned_cols=107 Identities=14% Similarity=0.023 Sum_probs=52.5
Q ss_pred cCeEEEEECCCCcEEE-ecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 149 TADVHCYDVLTNKWSR-ITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~-l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.+.+.++|+.+.+-.. +.... ....-++.+.- |..+|+.|+. .+.+++||+.+....+.... .....
T Consensus 10 d~~v~v~D~~s~~~~~~i~~~~---~~~~~~~i~~spDg~~l~v~~~~------~~~v~v~D~~t~~~~~~~~~-~~~~~ 79 (337)
T d1pbyb_ 10 PDKLVVIDTEKMAVDKVITIAD---AGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDL-STPEE 79 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTT---CTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEEC-CBTTE
T ss_pred CCEEEEEECCCCeEEEEEECCC---CCCCccEEEECCCCCEEEEEECC------CCeEEEEECCCCcEEEEEec-CCCcc
Confidence 3588999999886333 33211 11222233333 3477887653 25799999998542222211 11111
Q ss_pred CCCcccEEEEEC-CcEEEEEccCCC------CCCCCeEEEEECCCCC
Q 001895 226 GPRYGHVMALVG-QRYLMAIGGNDG------KRPLADVWALDTAAKP 265 (999)
Q Consensus 226 ~~R~~h~~~v~~-~~~Lyv~GG~~g------~~~~ndv~~yDl~s~~ 265 (999)
.....+.+++.. +.++|+.+.... ......+..+|..+..
T Consensus 80 ~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 126 (337)
T d1pbyb_ 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred cccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe
Confidence 112223333333 335555433211 1123467788888773
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=83.23 E-value=20 Score=34.11 Aligned_cols=92 Identities=17% Similarity=0.246 Sum_probs=53.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.+.++|+.+++..+.-..+. .-++++.- +.+||+.++.+ +.+.+||+.+.. .+. ..+..
T Consensus 12 ~~v~v~D~~t~~~~~~i~~g~-----~p~~va~spdG~~l~v~~~~~------~~i~v~d~~t~~----~~~---~~~~~ 73 (301)
T d1l0qa2 12 DNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAHS------NDVSIIDTATNN----VIA---TVPAG 73 (301)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTE----EEE---EEECS
T ss_pred CEEEEEECCCCeEEEEEECCC-----CceEEEEeCCCCEEEEEECCC------CEEEEEECCCCc----eee---eeecc
Confidence 368899999998776544431 22444444 34788776542 579999998852 222 11222
Q ss_pred CcccEEEEECCc-EEEEEccCCCCCCCCeEEEEECCCC
Q 001895 228 RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 228 R~~h~~~v~~~~-~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
..-+.++...++ .+++.+. ++ ..+..+|..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 106 (301)
T d1l0qa2 74 SSPQGVAVSPDGKQVYVTNM-AS----STLSVIDTTSN 106 (301)
T ss_dssp SSEEEEEECTTSSEEEEEET-TT----TEEEEEETTTT
T ss_pred cccccccccccccccccccc-cc----ceeeecccccc
Confidence 333455554443 4554443 22 35677888777
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=82.76 E-value=2.3 Score=41.92 Aligned_cols=114 Identities=13% Similarity=0.099 Sum_probs=57.2
Q ss_pred EEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEEEeccCCCCCCcccEE
Q 001895 233 MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGRDASSVPLASAY 311 (999)
Q Consensus 233 ~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~LyvfGG~~~~~~~~~d~~ 311 (999)
++...++.+++.|+.++ .+..||+.+. +...+..... ...-.++. ..++.+++.|+.++ .++
T Consensus 142 ~~~s~~~~~l~~g~~dg-----~i~~~d~~~~--~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d~------~i~ 204 (299)
T d1nr0a2 142 VALSNDKQFVAVGGQDS-----KVHVYKLSGA--SVSEVKTIVH----PAEITSVAFSNNGAFLVATDQSR------KVI 204 (299)
T ss_dssp EEECTTSCEEEEEETTS-----EEEEEEEETT--EEEEEEEEEC----SSCEEEEEECTTSSEEEEEETTS------CEE
T ss_pred ccccccccccccccccc-----cccccccccc--cccccccccc----ccccccccccccccccccccccc------ccc
Confidence 33444446777887765 6788888776 5444322211 01112222 33566667776544 245
Q ss_pred EEecCCCCeEEEEECC-CCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 312 GLAKHRDGRWEWAIAP-GVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 312 ~~~~~~~~~W~w~~~~-g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.++..+. ...... ........-.++++. ++.+++.||.+ +.|.+||+++...
T Consensus 205 ~~~~~~~---~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~d---------g~i~iwd~~~~~~ 258 (299)
T d1nr0a2 205 PYSVANN---FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD---------NSVIVWNMNKPSD 258 (299)
T ss_dssp EEEGGGT---TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT---------SCEEEEETTCTTS
T ss_pred ccccccc---ccccccccccccccccccccccccccceEEEcCC---------CEEEEEECCCCCc
Confidence 5554433 111111 111011112233333 67788888753 3388899887654
|