Citrus Sinensis ID: 001901
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 998 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SHS7 | 1006 | Serine/threonine-protein | yes | no | 0.988 | 0.981 | 0.901 | 0.0 | |
| Q9SJF0 | 1018 | Serine/threonine-protein | no | no | 0.992 | 0.973 | 0.880 | 0.0 | |
| Q2QM47 | 1009 | Serine/threonine-protein | yes | no | 0.993 | 0.983 | 0.851 | 0.0 | |
| Q60EX6 | 883 | Serine/threonine-protein | no | no | 0.861 | 0.973 | 0.633 | 0.0 | |
| Q8L7U5 | 881 | Serine/threonine-protein | no | no | 0.862 | 0.977 | 0.613 | 0.0 | |
| Q9LR78 | 793 | Serine/threonine-protein | no | no | 0.787 | 0.991 | 0.453 | 0.0 | |
| P48482 | 312 | Serine/threonine-protein | no | no | 0.288 | 0.923 | 0.488 | 6e-74 | |
| P48484 | 321 | Serine/threonine-protein | no | no | 0.293 | 0.912 | 0.472 | 3e-73 | |
| P22198 | 316 | Serine/threonine-protein | N/A | no | 0.287 | 0.908 | 0.481 | 4e-73 | |
| O82734 | 324 | Serine/threonine-protein | no | no | 0.292 | 0.901 | 0.472 | 8e-73 |
| >sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1758 bits (4553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1001 (90%), Positives = 940/1001 (93%), Gaps = 14/1001 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTS-----EESMEREQLADTEQPSGSPASTTSQSQQQPQQ 55
MD+DS+MVPE D DP EN S EE+ E++ +++E S +P+ QQQ
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPMEEKEEASEQQTGSESESASLTPSLPPPSQQQQ--- 57
Query: 56 HQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPR 115
QQQQ Q T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPR
Sbjct: 58 QQQQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPR 117
Query: 116 LILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPR 175
LILFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKWSR+TP+GEPP+PR
Sbjct: 118 LILFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPR 177
Query: 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235
AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL
Sbjct: 178 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 237
Query: 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295
VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL
Sbjct: 238 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 297
Query: 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG 355
LCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGG
Sbjct: 298 LCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGG 357
Query: 356 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVG 415
GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVG
Sbjct: 358 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVG 417
Query: 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDER 474
DLIFIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DER
Sbjct: 418 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDER 477
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
T + +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KGVE LV+ASAAEA
Sbjct: 478 TGE-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEA 535
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHH
Sbjct: 536 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHH 595
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV
Sbjct: 596 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 655
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFG
Sbjct: 656 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFG 715
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGN
Sbjct: 716 DLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGN 775
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 776 HEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 835
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 836 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 895
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 896 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 955
Query: 952 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
HPLPPAI+SPETSPERHIEDTWMQELN NRPPTPTRGRPQN
Sbjct: 956 HPLPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQN 996
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6 |
| >sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana GN=BSL2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1753 bits (4540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1008 (88%), Positives = 929/1008 (92%), Gaps = 17/1008 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--SGS------PASTTS 47
MD DS+MV + D D + + S MERE Q+ D P GS +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q2QM47|BSL2_ORYSJ Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1660 bits (4298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 856/1005 (85%), Positives = 902/1005 (89%), Gaps = 13/1005 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS M E+D D + E + + G+P + + P
Sbjct: 1 MDVDSRMTTESDSDSDAAAQGGGGGGFGSETSSASPSAPGTPTAMGAGGGAAPIAAAAIA 60
Query: 61 TQQTPVVGP--RCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 118
+ V R AP Y+VVNA +EKKEDGPG RCGHTLTAV AVGEEG PGY+GPRLIL
Sbjct: 61 AAASAAVVAGPRPAPGYTVVNAAMEKKEDGPGCRCGHTLTAVPAVGEEGAPGYVGPRLIL 120
Query: 119 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAH 178
FGGATALEGNSA PSSAGSAGIRLAGATADVHCYDV +NKWSR+TP GEPP+PRAAH
Sbjct: 121 FGGATALEGNSATP--PSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEPPSPRAAH 178
Query: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ
Sbjct: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
Query: 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
R+L+ IGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG
Sbjct: 239 RFLLTIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
Query: 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
GRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM
Sbjct: 299 GRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
Query: 359 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
VEDSSSVAVLDTAAGVWCDTKSVVT+PRTGRYSADAAGGDA+VELTRRCRHAAAAVGD+I
Sbjct: 359 VEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDMI 418
Query: 419 FIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQ 477
++YGGLRGGVLLDDLLVAEDLAAAETT AA+ AAA AAAS++Q+ R PGRY + DE+T Q
Sbjct: 419 YVYGGLRGGVLLDDLLVAEDLAAAETTNAANQAAAIAAASDIQAGREPGRYAYNDEQTGQ 478
Query: 478 TIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAI 537
+PDG+VVLG PVA P+NGDMYTDIS ENA++QG RR++KGV+ LV+ASAAEAEAI
Sbjct: 479 PATITSPDGAVVLGTPVAAPVNGDMYTDISPENAVIQGQRRMSKGVDYLVEASAAEAEAI 538
Query: 538 SATLAAVKARQVNGEVE-LPDRDRGAEATPSGKQ---MIKPDSAGSN-SIAPAGVRLHHR 592
SATLAAVKARQVNGE E PDR++ +ATPS KQ +IKPD A SN S P GVRLHHR
Sbjct: 539 SATLAAVKARQVNGEAEHSPDREQSPDATPSVKQNASLIKPDYALSNNSTPPPGVRLHHR 598
Query: 593 AVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVI 652
AVVVAAETGGALGGMVRQLSIDQFENEGRRV YGTPESATAARKLLDRQMSINSVPKKVI
Sbjct: 599 AVVVAAETGGALGGMVRQLSIDQFENEGRRVIYGTPESATAARKLLDRQMSINSVPKKVI 658
Query: 653 AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 712
A LLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD
Sbjct: 659 ASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 718
Query: 713 LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772
LMRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP NVHLIRGNH
Sbjct: 719 LMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNH 778
Query: 773 EAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSIN 832
EAADINALFGFRIECIERMGERDGIW WHR+NRLFNWLPLAALIEKKIICMHGGIGRSIN
Sbjct: 779 EAADINALFGFRIECIERMGERDGIWTWHRMNRLFNWLPLAALIEKKIICMHGGIGRSIN 838
Query: 833 HVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 892
HVEQIENLQRPITMEAGS+VLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN
Sbjct: 839 HVEQIENLQRPITMEAGSVVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 898
Query: 893 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 952
NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH
Sbjct: 899 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 958
Query: 953 PLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ---NDR 994
PLPPAI+SPETSPE H+EDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 959 PLPPAITSPETSPEHHLEDTWMQELNANRPPTPTRGRPQAANNDR 1003
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/922 (63%), Positives = 674/922 (73%), Gaps = 62/922 (6%)
Query: 72 APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAA 131
AP Y V +D PG RCGH+LT VA T G+ GPRLILFGGATA+E A+
Sbjct: 13 APAYREVEGWEGAGDDSPGFRCGHSLTVVAP-----TKGH-GPRLILFGGATAIEAG-AS 65
Query: 132 SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQG 191
SG P GIRLAG T VH YDV T +W+R+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 66 SGMP------GIRLAGVTNSVHSYDVDTRRWTRLHPAGEPPSPRAAHAAAAVGTMVVFQG 119
Query: 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGH M LV QRYL+ + GNDGKR
Sbjct: 120 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGAGPGPRYGHCMDLVAQRYLVTVSGNDGKR 179
Query: 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311
L+D WALDTA KPY W+KL P+G+ P MYATASAR+DG+LLLCGGRDAS +PL+ AY
Sbjct: 180 VLSDAWALDTAQKPYRWQKLNPDGDRPSARMYATASARTDGMLLLCGGRDASGMPLSDAY 239
Query: 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
GL H G+WEW +APGVSPSPRYQHAAVFV ARLHV+GG L GGR +E ++AVLDTA
Sbjct: 240 GLLMHTSGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAIEGEGAIAVLDTA 299
Query: 372 AGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
AGVW D +VTS RT + S D DA+ +L RRCRHAAA+VG I+IYGGLRG +LLD
Sbjct: 300 AGVWLDRNGIVTS-RTLKSSHDH---DASSDLLRRCRHAAASVGTQIYIYGGLRGDILLD 355
Query: 432 DLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTIPEAAPDGSVVLG 491
D LVA++ A S S + R + + R
Sbjct: 356 DFLVADN---------------APIQSEFTSSMYDRVPRAENQNR--------------- 385
Query: 492 NPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISATL-AAVKARQVN 550
N + +D T N K ++ L QASAAEAEA+SA AA +A +
Sbjct: 386 -------NHNFNSDSPTTNNSTD-----KKSIDMLTQASAAEAEAVSAVWRAAQEASHAS 433
Query: 551 GEVELPDRDRGAEATPSGKQMIKPDSAGSNSIAPAGVRLHHRAVVVAAETGGALGGMVRQ 610
E L + G+E+ S + D S+ P V+LH RAVVV+ E G LG +VRQ
Sbjct: 434 SEDSLSE-GIGSESPLSETSPMPEDLDDGGSLEP-DVKLHSRAVVVSKEAVGDLGCLVRQ 491
Query: 611 LSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFF 670
LS+DQFENE RR+ + + + A+K L+RQ S + KKVI+ LLKPR W+ P R FF
Sbjct: 492 LSLDQFENESRRMHPSSNDQSYPAKKALNRQRSPQGLHKKVISFLLKPRNWRAPAERAFF 551
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIA 730
LD E+ +LC +AE+IF EP+VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 552 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDIT 611
Query: 731 YIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIER 790
YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIER
Sbjct: 612 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 671
Query: 791 MGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850
MGE DGIWAW R N+LFN+LPLAA+IEKKIICMHGGIGRSIN +EQIE L+RPITM+ GS
Sbjct: 672 MGESDGIWAWTRFNQLFNYLPLAAMIEKKIICMHGGIGRSINTIEQIEKLERPITMDVGS 731
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
I+LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDGF
Sbjct: 732 IILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKRNRLQLIIRAHECVMDGF 791
Query: 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIE 970
ERFA G LITLFSATNYCGTANNAGAILV+GR LV+VPKLIHPLPP ++SPE+SPER ++
Sbjct: 792 ERFAHGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPVNSPESSPERAMD 851
Query: 971 DTWMQELNANRPPTPTRGRPQN 992
TWMQELN RPPTPTRGRPQ+
Sbjct: 852 ATWMQELNIQRPPTPTRGRPQS 873
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/924 (61%), Positives = 653/924 (70%), Gaps = 63/924 (6%)
Query: 72 APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAA 131
AP Y + + ++D PGPRC HTLTAVAA G PRLILFGGATA+EG S++
Sbjct: 10 APQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHG------PRLILFGGATAIEGGSSS 63
Query: 132 SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQG 191
GIRLAG T VH YD+LT KW+R+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 64 V--------PGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQG 115
Query: 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251
GIGPAG S +DL+VLD+T + +WHRVVVQG GPGPRYGHVM LV QRYL+ + GNDGKR
Sbjct: 116 GIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKR 175
Query: 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311
L+D WALDTA KPY W++L P+G+ P MYA+ SARSDG+ LLCGGRD PL AY
Sbjct: 176 ALSDAWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAY 235
Query: 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
GL HR+G+WEW +APGV+PSPRYQHAAVFV ARLHVSGG L GGR+++ +SVAVLDTA
Sbjct: 236 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTA 295
Query: 372 AGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
AGVW D VTS R + D D + EL RRCRH AA+VG I+++GGLRG VLLD
Sbjct: 296 AGVWLDRNGQVTSARGSKGQIDQ---DPSFELMRRCRHGAASVGIRIYVHGGLRGDVLLD 352
Query: 432 DLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTIPEAAPDGSVVLG 491
D LVAE+ + S++ S L +RT+Q+ + P S
Sbjct: 353 DFLVAEN---------------STFQSDISSPL-----LASDRTQQS---STPRFSYAAR 389
Query: 492 NPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISATLAAVKARQVNG 551
P + M +S + L+ + + + A+ + TL
Sbjct: 390 PPSGSEPSFSMSEGLSLDENSLEKLTEASAAEAEVASSVWRAAQLGAGTL---------- 439
Query: 552 EVELPDRDRGAEATPSGKQMIKP--DSAGSNSIAPAGVRLHHRAVVVAAETGGALGGMVR 609
+ PS P +S + VRLH RAVVVA ET G+LGGMVR
Sbjct: 440 -----------DEEPSTSDASSPIVESTTDGTANEGDVRLHPRAVVVAKETVGSLGGMVR 488
Query: 610 QLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQF 669
QLS+DQF+NE RR+ K RQ S + KKVIA LL+PR WKPP R+F
Sbjct: 489 QLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHKKVIAALLRPRNWKPPGNRKF 548
Query: 670 FLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI 729
FLD E+ +LC +AE+IF E +VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 549 FLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDI 608
Query: 730 AYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIE 789
YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIE
Sbjct: 609 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIE 668
Query: 790 RMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAG 849
RMGE DGIWAW R N+LFN+LPLAALIE KIICMHGGIGRSI+ VEQIE ++RPITM+AG
Sbjct: 669 RMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGRSISTVEQIEKIERPITMDAG 728
Query: 850 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDG 909
S+VLMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDG
Sbjct: 729 SLVLMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDG 788
Query: 910 FERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHI 969
FERFAQG LITLFSATNYCGTANNAGAILV+GR LV+VPKLIHPLPP I SPE SPE
Sbjct: 789 FERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPILSPENSPEHSG 848
Query: 970 EDTWMQELNANRPPTPTRGRPQND 993
+D WMQELN RPPTPTRGRPQ D
Sbjct: 849 DDAWMQELNIQRPPTPTRGRPQPD 872
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/930 (45%), Positives = 539/930 (57%), Gaps = 144/930 (15%)
Query: 60 QTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILF 119
Q+ Q P +P+Y + + ED PGPRCGHTLTAV +LILF
Sbjct: 5 QSYQYP------SPSYESIQTFYDTDEDWPGPRCGHTLTAVFVNNSH--------QLILF 50
Query: 120 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHV 179
GG+T N +S P I L G T VH +DVLT KW+R+ P G+ P+PRA H
Sbjct: 51 GGSTTAVANHNSS-LPE------ISLDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHA 103
Query: 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
A GT+++IQGGIGP+G S D+++LD+T + W + +V G P PRYGHVM + QR
Sbjct: 104 AALYGTLILIQGGIGPSGPSDGDVYMLDMTNNK--WIKFLVGGETPSPRYGHVMDIAAQR 161
Query: 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299
+L+ GN+G L D WALDT P+ W +L P G P MYA+ S+R DG+ LLCGG
Sbjct: 162 WLVIFSGNNGNEILDDTWALDTRG-PFSWDRLNPSGNQPSGRMYASGSSREDGIFLLCGG 220
Query: 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359
D S V L YGL D W P V+PSPRYQH AVF ++LHV GG L R++
Sbjct: 221 IDHSGVTLGDTYGLKMDSDNVW--TPVPAVAPSPRYQHTAVFGGSKLHVIGGILNRARLI 278
Query: 360 EDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419
+ + VAVLDT G W DT P T SA A +L RRC HAAA+ G ++
Sbjct: 279 DGEAVVAVLDTETGEWVDTNQ----PET---SASGANRQNQYQLMRRCHHAAASFGSHLY 331
Query: 420 IYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTI 479
++ GG+ D LL +DL V E ++ +
Sbjct: 332 VH----GGIREDVLL--DDL------------------------------LVAETSQSSS 355
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PE D NP +N ML L + + ++E EA S
Sbjct: 356 PEPEED------NP---------------DNYML-----LDDYLMDEPKPLSSEPEASSF 389
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGKQMIKPDSAGSNSIAPAGVRLHHRAVVVAAE 599
+ + E+ + DR AEA + ++A +S V L H AE
Sbjct: 390 IMRSTS------EIAM---DRLAEA----HNLPTIENAFYDSAIEGYVPLQH-----GAE 431
Query: 600 TGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPR 659
T G GG+VR S+DQ S + KKVI+ LL+P+
Sbjct: 432 TVGNRGGLVRTASLDQ---------------------------STQDLHKKVISTLLRPK 464
Query: 660 GWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDE 719
W PP R FFL E+ LCD E+IF +EP++LQLK PIK+FGD+HGQ+GDLMRLF E
Sbjct: 465 TWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKVFGDIHGQYGDLMRLFHE 524
Query: 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINA 779
YG PS GDI +IDYLFLGDYVDRGQHSLE I LL ALK+EYP N+HLIRGNHE+ +N
Sbjct: 525 YGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYPKNIHLIRGNHESLAMNR 584
Query: 780 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIEN 839
++GF EC ERMGE G AW +IN++F++LPLAAL+EKK++C+HGGIGR++ +E+IEN
Sbjct: 585 IYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLCVHGGIGRAVT-IEEIEN 643
Query: 840 LQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
++RP + GS+VL D+LWSDPT ND+V G+ NARG G+V+FGPD V F N L++I
Sbjct: 644 IERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSFGPDIVKAFLERNGLEMI 703
Query: 900 VRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAIS 959
+RAHECV+DGFERFA G LIT+FSATNYCGTA NAGAILV+GRD+V+ PKLIHP PP IS
Sbjct: 704 LRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGRDMVIYPKLIHPHPPPIS 763
Query: 960 SPETSPERHIEDTWMQELNANRPPTPTRGR 989
S E E + + WMQELN PPTP RG
Sbjct: 764 SSE---EDYTDKAWMQELNIEMPPTPARGE 790
|
Phosphatase that acts as a positive regulator of brassinolide signaling. Dephosphorylates BES1, a transcription factor that regulates the expression of brassinolide-response genes, thereby playing an important role in the regulation of response to brassinosteroids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48482|PP12_ARATH Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 280 bits (715), Expect = 6e-74, Method: Composition-based stats.
Identities = 148/303 (48%), Positives = 198/303 (65%), Gaps = 15/303 (4%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R KP + Q L+ +EI LC + IF +P++L+L+APIKI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKPGTK-QAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P TA +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFSVR----LWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +VEQI+N++RP T S +L DLLWSDP+++ V+G N RG TFGPD+V EF
Sbjct: 186 LTNVEQIKNIKRP-TDVPDSGLLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAEF 241
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
ND+ LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 242 LIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI 301
Query: 951 IHP 953
+ P
Sbjct: 302 LKP 304
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats.
Identities = 146/309 (47%), Positives = 200/309 (64%), Gaps = 16/309 (5%)
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
++V +I L + R +P +Q L EI LC +A IF +P++L+L+APIKI G
Sbjct: 16 SAVLDDIIRRLTEVRLARPG--KQVQLSEAEIKQLCTTARDIFLQQPNLLELEAPIKICG 73
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
D+HGQ+ DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K++YP N
Sbjct: 74 DIHGQYSDLLRLFEYGGFPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPGN 127
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
L+RGNHE A IN ++GF EC R R W FN LP+AALI+ KI+CMH
Sbjct: 128 FFLLRGNHECASINRIYGFYDECKRRFNVR----VWKVFTDCFNCLPVAALIDDKILCMH 183
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GG+ ++H+++I NL RP TM + +L DLLWSDP ++ V+G N RG TFGP
Sbjct: 184 GGLSPDLDHLDEIRNLPRP-TMIPDTGLLCDLLWSDPGKD--VKGWGMNDRGVSY-TFGP 239
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
D+V EF +DL L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + +L
Sbjct: 240 DKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENL 299
Query: 945 VVVPKLIHP 953
+ +++ P
Sbjct: 300 MCSFQILKP 308
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P22198|PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats.
Identities = 146/303 (48%), Positives = 193/303 (63%), Gaps = 16/303 (5%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
VI LL+ + KP Q L +EI LC +A+ IF +P++L+L+APIKI GD+HGQ+
Sbjct: 9 VIRRLLEVKNLKPGKNAQ--LSESEIKQLCAAAKEIFLQQPNLLELEAPIKICGDVHGQY 66
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLFD G P A +YLFLGDYVDRG+ SLETI LLLA KV+YP N L+RG
Sbjct: 67 SDLLRLFDYGGYPPQA------NYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRG 120
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A +N ++GF EC R + W FN LP++ALI++KI+CMHGG+
Sbjct: 121 NHECASVNRIYGFYDECKRRFSVK----LWKTFTDCFNCLPVSALIDEKILCMHGGLSPE 176
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+N +EQI NL RP + + L DLLWSDP+ + G N RG TFGPD+V EF
Sbjct: 177 LNKLEQILNLNRPTDVPDTGL-LCDLLWSDPS--NEATGWAINDRGVSF-TFGPDKVSEF 232
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+DL LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 233 LEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQI 292
Query: 951 IHP 953
+ P
Sbjct: 293 LKP 295
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|O82734|PP18_ARATH Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 8e-73, Method: Composition-based stats.
Identities = 147/311 (47%), Positives = 200/311 (64%), Gaps = 19/311 (6%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ +G K Q L +EI LC +A +IF S+P++L L API+I GD+HGQ+
Sbjct: 17 IIRRLLEGKGGK-----QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQY 71
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K+ YP+ ++L+RG
Sbjct: 72 QDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRG 125
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AALI++KI+CMHGG+
Sbjct: 126 NHEDAKINRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDEKILCMHGGLSPD 181
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
++++ QI +QRPI + S +L DLLWSDP + +EG + RG TFG D+V EF
Sbjct: 182 LDNLNQIREIQRPIEI-PDSGLLCDLLWSDP--DQKIEGWADSDRGIS-CTFGADKVAEF 237
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ NDL LI R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV ++
Sbjct: 238 LDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEI 297
Query: 951 IHPLPPAISSP 961
+ P P + S P
Sbjct: 298 MKPAPASSSHP 308
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 998 | ||||||
| 225462440 | 1006 | PREDICTED: serine/threonine-protein phos | 0.992 | 0.985 | 0.935 | 0.0 | |
| 449444819 | 1002 | PREDICTED: serine/threonine-protein phos | 0.991 | 0.988 | 0.911 | 0.0 | |
| 356544772 | 1001 | PREDICTED: serine/threonine-protein phos | 0.985 | 0.983 | 0.905 | 0.0 | |
| 42569377 | 1006 | serine/threonine-protein phosphatase BSL | 0.988 | 0.981 | 0.901 | 0.0 | |
| 395133376 | 999 | Ser/Thr phosphatase-containing Kelch rep | 0.987 | 0.986 | 0.903 | 0.0 | |
| 356539201 | 1010 | PREDICTED: serine/threonine-protein phos | 0.989 | 0.978 | 0.910 | 0.0 | |
| 297822385 | 1002 | kelch repeat-containing serine/threonine | 0.989 | 0.986 | 0.904 | 0.0 | |
| 15223207 | 1018 | serine/threonine-protein phosphatase BSL | 0.992 | 0.973 | 0.880 | 0.0 | |
| 222423388 | 1018 | AT1G08420 [Arabidopsis thaliana] | 0.992 | 0.973 | 0.880 | 0.0 | |
| 297843622 | 1017 | kelch repeat-containing protein [Arabido | 0.992 | 0.974 | 0.880 | 0.0 |
| >gi|225462440|ref|XP_002264614.1| PREDICTED: serine/threonine-protein phosphatase BSL3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1787 bits (4628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 938/1003 (93%), Positives = 960/1003 (95%), Gaps = 12/1003 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQ 58
MDVDS+MVPE D DP+ + SMEREQ + S A +QQQ QQ QQ
Sbjct: 1 MDVDSSMVPETDQDPSTPNHGAPSISASMEREQQLGAAEQS---APAQPPAQQQQQQQQQ 57
Query: 59 QQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 118
Q QQ+PV GPR APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL
Sbjct: 58 AQVQQSPVAGPRHAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 117
Query: 119 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAH 178
FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV+TNKWSRITPFGEPPTPRAAH
Sbjct: 118 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVITNKWSRITPFGEPPTPRAAH 177
Query: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ
Sbjct: 178 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 237
Query: 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG
Sbjct: 238 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 297
Query: 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
GRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM
Sbjct: 298 GRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 357
Query: 359 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
VEDSSSVAVLDTAAGVWCDTKSVVTSPRTG+YSADAAGGDAAVELTRRCRHAAAAVGDLI
Sbjct: 358 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGKYSADAAGGDAAVELTRRCRHAAAAVGDLI 417
Query: 419 FIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQ 477
FIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAASN+Q+ RLPGRYGF+DERTRQ
Sbjct: 418 FIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAASNLQAGRLPGRYGFIDERTRQ 477
Query: 478 TIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAI 537
TIPEAAPDGSVVLG PVAPP+NGDMYTDISTENAMLQG+RRL+KGVE LV+ASAAEAEAI
Sbjct: 478 TIPEAAPDGSVVLGTPVAPPVNGDMYTDISTENAMLQGSRRLSKGVEYLVEASAAEAEAI 537
Query: 538 SATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIK-PDSAGSNSIAPAGVRLHHRA 593
SATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IK PDSAGSN+IAPAGVRLHHRA
Sbjct: 538 SATLAAAKARQVNGEVELPDRDRGAEATPSGKQISTLIKMPDSAGSNNIAPAGVRLHHRA 597
Query: 594 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA
Sbjct: 598 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 657
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQ+KAP+KIFGDLHGQFGDL
Sbjct: 658 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQIKAPVKIFGDLHGQFGDL 717
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP NVHLIRGNHE
Sbjct: 718 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNHE 777
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 778 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 837
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 838 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 897
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 898 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 957
Query: 954 LPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
LPPAISSPETSPERH+EDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 958 LPPAISSPETSPERHLEDTWMQELNANRPPTPTRGRPQVTNDR 1000
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444819|ref|XP_004140171.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1784 bits (4620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 911/1000 (91%), Positives = 940/1000 (94%), Gaps = 10/1000 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
M+VDS+MVPE DHDPAV+ +T + D EQP T+ QS PQQ Q
Sbjct: 1 MEVDSSMVPEPDHDPAVQNHSTVSSTAAG---VDREQPQAG-GGTSPQSMSLPQQQQTTV 56
Query: 61 TQQTPVV-GPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILF 119
Q V GPR AP YSVVNA+I+KKEDGPGPRCGHTLTAV +VGEEGTPGYIGPRLILF
Sbjct: 57 QMQQTTVVGPRLAPAYSVVNAIIDKKEDGPGPRCGHTLTAVGSVGEEGTPGYIGPRLILF 116
Query: 120 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHV 179
GGATALEGNSAASGTPSSAGSAGIRLAGATADVHC+DVL NKWSRITP GEPPTPRAAHV
Sbjct: 117 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCFDVLANKWSRITPLGEPPTPRAAHV 176
Query: 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR
Sbjct: 177 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 236
Query: 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299
YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG
Sbjct: 237 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 296
Query: 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359
RDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV
Sbjct: 297 RDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 356
Query: 360 EDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419
EDSSSVAVLDTAAGVWCD KSVVT+PRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIF
Sbjct: 357 EDSSSVAVLDTAAGVWCDIKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIF 416
Query: 420 IYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTI 479
IYGGLRGGVLLDDLLVAED+AAAETT+AASHAAAAAAAS RLP RYGF DER RQT+
Sbjct: 417 IYGGLRGGVLLDDLLVAEDMAAAETTSAASHAAAAAAASVQPGRLPPRYGFTDERARQTM 476
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PEAAPDGSVVLGNPVAPP+NGDMYTDISTENAMLQG RR++KGVE LV+ASAAEAEAISA
Sbjct: 477 PEAAPDGSVVLGNPVAPPVNGDMYTDISTENAMLQGQRRMSKGVEYLVEASAAEAEAISA 536
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRAVVV 596
T AA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDS GSNSIAPAGVRLHHRAVVV
Sbjct: 537 TFAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSTGSNSIAPAGVRLHHRAVVV 596
Query: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLL 656
AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSINSVPKKVIAHLL
Sbjct: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLL 656
Query: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
KPRGWKPPVRRQFFLDCNEIADLCDSAE+IFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL
Sbjct: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAEKIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
Query: 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
FDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY NVHLIRGNHEAAD
Sbjct: 717 FDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYQQNVHLIRGNHEAAD 776
Query: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQ 836
INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV+Q
Sbjct: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVQQ 836
Query: 837 IENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
IEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL
Sbjct: 837 IENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
Query: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP
Sbjct: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
Query: 957 AISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
A++SPE SPERH+EDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 957 AMTSPEASPERHLEDTWMQELNANRPPTPTRGRPQVTNDR 996
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544772|ref|XP_003540821.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1759 bits (4557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 910/1005 (90%), Positives = 942/1005 (93%), Gaps = 21/1005 (2%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQP-----SGSPASTTSQSQQQPQQ 55
MDVDS+MVPE DHDP V+ ER+QL ++ P GSPA Q QQP
Sbjct: 1 MDVDSSMVPEPDHDPPVQNH------AERDQLGESPSPPPSEGGGSPA----QPHQQPLP 50
Query: 56 HQQQQTQQ-TPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP 114
Q QQ P+VGPR APTYSVVNA++EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP
Sbjct: 51 PTAAQVQQPNPLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP 110
Query: 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTP 174
RLILFGGATALEGNSA SGTPSSAG+AGIRLAGATAD+HCYDV+TNKWSRITP GEPP+
Sbjct: 111 RLILFGGATALEGNSAVSGTPSSAGNAGIRLAGATADIHCYDVITNKWSRITPIGEPPSS 170
Query: 175 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234
RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV V GPGPGPRYGHVMA
Sbjct: 171 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMA 230
Query: 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294
LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL
Sbjct: 231 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 290
Query: 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 354
LLCGGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG
Sbjct: 291 LLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 350
Query: 355 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414
GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAA+
Sbjct: 351 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAI 410
Query: 415 GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDER 474
GDLIFIYGGLRGGVLLDDLLVAEDLAAAETT A+ AAAAAA++ RLPGRYGF+D+R
Sbjct: 411 GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASHAAAAAAASNVQAGRLPGRYGFIDDR 470
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
TRQT+PE PDGSVVLGNPVAPP+NGDMYTDISTENA+L G+RR +KGVE LV+ASAAEA
Sbjct: 471 TRQTMPETDPDGSVVLGNPVAPPVNGDMYTDISTENALLPGSRRTSKGVEYLVEASAAEA 530
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDSAGSNSI P GVRLHH
Sbjct: 531 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHH 590
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPES TAARKLLDRQMSINSVPKKV
Sbjct: 591 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESTTAARKLLDRQMSINSVPKKV 650
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDLHGQFG
Sbjct: 651 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFG 710
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETI+LLLALKVEYPNNVHLIRGN
Sbjct: 711 DLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGN 770
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 771 HEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 830
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 831 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 890
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 891 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 950
Query: 952 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 951 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDR 995
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42569377|ref|NP_180289.3| serine/threonine-protein phosphatase BSL3 [Arabidopsis thaliana] gi|160359047|sp|Q9SHS7.2|BSL3_ARATH RecName: Full=Serine/threonine-protein phosphatase BSL3; AltName: Full=BSU1-like protein 3 gi|330252859|gb|AEC07953.1| serine/threonine-protein phosphatase BSL3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1758 bits (4553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1001 (90%), Positives = 940/1001 (93%), Gaps = 14/1001 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTS-----EESMEREQLADTEQPSGSPASTTSQSQQQPQQ 55
MD+DS+MVPE D DP EN S EE+ E++ +++E S +P+ QQQ
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPMEEKEEASEQQTGSESESASLTPSLPPPSQQQQ--- 57
Query: 56 HQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPR 115
QQQQ Q T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPR
Sbjct: 58 QQQQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPR 117
Query: 116 LILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPR 175
LILFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKWSR+TP+GEPP+PR
Sbjct: 118 LILFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPR 177
Query: 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235
AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL
Sbjct: 178 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 237
Query: 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295
VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL
Sbjct: 238 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 297
Query: 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG 355
LCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGG
Sbjct: 298 LCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGG 357
Query: 356 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVG 415
GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVG
Sbjct: 358 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVG 417
Query: 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDER 474
DLIFIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DER
Sbjct: 418 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDER 477
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
T + +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KGVE LV+ASAAEA
Sbjct: 478 TGE-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEA 535
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHH
Sbjct: 536 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHH 595
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV
Sbjct: 596 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 655
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFG
Sbjct: 656 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFG 715
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGN
Sbjct: 716 DLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGN 775
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 776 HEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 835
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 836 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 895
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 896 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 955
Query: 952 HPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
HPLPPAI+SPETSPERHIEDTWMQELN NRPPTPTRGRPQN
Sbjct: 956 HPLPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQN 996
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395133376|gb|AFN44701.1| Ser/Thr phosphatase-containing Kelch repeat domain protein [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1757 bits (4551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 904/1001 (90%), Positives = 929/1001 (92%), Gaps = 15/1001 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS M E+DH EN S EQL GSP T QQ QQQ
Sbjct: 1 MDVDSTMSSESDH-----AENKGASS---EQLNGQSSAGGSPPETPKDEQQPATSQPQQQ 52
Query: 61 TQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFG 120
TPVVGPRCAPTYSVV+AV+EKKEDGPGPRCGHTLTAV AVGEEG+P YIGPRLILFG
Sbjct: 53 QGSTPVVGPRCAPTYSVVHAVMEKKEDGPGPRCGHTLTAVPAVGEEGSPNYIGPRLILFG 112
Query: 121 GATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVA 180
GATALEGNSA SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSR+TP GEPPTPRAAHVA
Sbjct: 113 GATALEGNSAGSGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRMTPIGEPPTPRAAHVA 172
Query: 181 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240
TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY
Sbjct: 173 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 232
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR
Sbjct: 233 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 292
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
DA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVE
Sbjct: 293 DANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVE 352
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DSSS+AVLDTAAGVWCDT SVVTSPRTGR+SADAAGGDAAVELTRRCRHAA AVGDLIFI
Sbjct: 353 DSSSIAVLDTAAGVWCDTTSVVTSPRTGRFSADAAGGDAAVELTRRCRHAAVAVGDLIFI 412
Query: 421 YGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQTI 479
YGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA NVQ+ RL GRYGF DERTRQT
Sbjct: 413 YGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAAVNVQAGRLTGRYGFGDERTRQTD 472
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PEA DGSVVLG PVAPP+NGDMY+DIS+ENA QG RRL KGVE LV+ASAAEAEAI+A
Sbjct: 473 PEAVNDGSVVLGTPVAPPVNGDMYSDISSENATFQGPRRLIKGVEYLVEASAAEAEAITA 532
Query: 540 TLAAVKARQV-NGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRAVV 595
TLAA KARQ NGEVELPDRDRGAEATPSGKQ +IKPD A SN+ APAGVRLHHRAVV
Sbjct: 533 TLAAAKARQQGNGEVELPDRDRGAEATPSGKQASTLIKPDFALSNNSAPAGVRLHHRAVV 592
Query: 596 VAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHL 655
+AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSINSVPKKVI HL
Sbjct: 593 IAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVITHL 652
Query: 656 LKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMR 715
LKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEPSV+QLKAPIKIFGDLHGQFGDLMR
Sbjct: 653 LKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPSVIQLKAPIKIFGDLHGQFGDLMR 712
Query: 716 LFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775
LFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLET+TLLLALKVEYP NVHLIRGNHEAA
Sbjct: 713 LFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETMTLLLALKVEYPLNVHLIRGNHEAA 772
Query: 776 DINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVE 835
DINALFGFRIECIERMGERDGIWAWHR NRLFNWLPLAALIEKKIICMHGGIGRSINHVE
Sbjct: 773 DINALFGFRIECIERMGERDGIWAWHRFNRLFNWLPLAALIEKKIICMHGGIGRSINHVE 832
Query: 836 QIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND 895
QIEN+QRPITM+AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND
Sbjct: 833 QIENIQRPITMDAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND 892
Query: 896 LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955
LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP
Sbjct: 893 LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 952
Query: 956 PAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
PAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 953 PAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVANDR 993
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539201|ref|XP_003538088.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1755 bits (4545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 920/1010 (91%), Positives = 950/1010 (94%), Gaps = 22/1010 (2%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS+MVPE DHDP V+ ER+QL D+ PS S + QQ QQQQ
Sbjct: 1 MDVDSSMVPEPDHDPPVQNH------AERDQLGDSPSPSLSEGGGSLAQSPPQQQQQQQQ 54
Query: 61 T----------QQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPG 110
Q +VGPR APTYSVVNA++EKKEDGPGPRCGHTLTAVAAVGEEGT G
Sbjct: 55 QPPPATAAQVHQPNSLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSG 114
Query: 111 YIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGE 170
YIGPRLILFGGATALEGNSAASGTPSSAG+AGIRLAGATADVHCYDV++NKWSRITP GE
Sbjct: 115 YIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVISNKWSRITPIGE 174
Query: 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230
PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV V GPGPGPRYG
Sbjct: 175 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYG 234
Query: 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290
HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS
Sbjct: 235 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 294
Query: 291 DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350
DGLLLLCGGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG
Sbjct: 295 DGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 354
Query: 351 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA 410
GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA
Sbjct: 355 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA 414
Query: 411 AAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYG 469
AAA+GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ+ RLPGRYG
Sbjct: 415 AAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGRLPGRYG 474
Query: 470 FVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQA 529
F+D+RTRQT+PEAA DGSVVLGNPVAPP+NGDMYTDISTENA+L GTRR +KGVE LV+A
Sbjct: 475 FIDDRTRQTMPEAASDGSVVLGNPVAPPVNGDMYTDISTENALLPGTRRTSKGVEYLVEA 534
Query: 530 SAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAG 586
SAAEAEAISATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDSAGSNSI P G
Sbjct: 535 SAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGG 594
Query: 587 VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS 646
VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS
Sbjct: 595 VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS 654
Query: 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDL 706
VPKKV+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDL
Sbjct: 655 VPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDL 714
Query: 707 HGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVH 766
HGQFGDLMRLF+EYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETI+LLLALKVEYPNNVH
Sbjct: 715 HGQFGDLMRLFEEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVH 774
Query: 767 LIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826
LIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGG
Sbjct: 775 LIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGG 834
Query: 827 IGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886
IGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR
Sbjct: 835 IGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 894
Query: 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV 946
VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV
Sbjct: 895 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV 954
Query: 947 VPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQ--NDR 994
VPKLIHPLPPAISSP+TSPERHIEDTWMQELNANRPPTPTRGRPQ NDR
Sbjct: 955 VPKLIHPLPPAISSPDTSPERHIEDTWMQELNANRPPTPTRGRPQVTNDR 1004
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297822385|ref|XP_002879075.1| kelch repeat-containing serine/threonine phosphoesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324914|gb|EFH55334.1| kelch repeat-containing serine/threonine phosphoesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 901/996 (90%), Positives = 937/996 (94%), Gaps = 8/996 (0%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MD+DS+MVPE D DP EN + ME+E + + +GS + + S + P QQQ
Sbjct: 1 MDLDSSMVPENDQDPVATPEN-HQSPMEKEASEQSTEETGSESESASLTPPSPPSQQQQP 59
Query: 61 TQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFG 120
T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT GYIGPRLILFG
Sbjct: 60 QVTT-VVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSGYIGPRLILFG 118
Query: 121 GATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVA 180
GATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVLTNKWSR+TP+GEPP+PRAAHVA
Sbjct: 119 GATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLTNKWSRLTPYGEPPSPRAAHVA 178
Query: 181 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240
TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY
Sbjct: 179 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 238
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR
Sbjct: 239 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 298
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
DA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVE
Sbjct: 299 DANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGRMVE 358
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIFI
Sbjct: 359 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFI 418
Query: 421 YGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDERTRQTI 479
YGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DERT + +
Sbjct: 419 YGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNSPPGRSPGRYGFSDERTGE-L 477
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PE+APD SVVLG+PVAPP+NGDMYTDISTENAM+ GTRR +KGVE LV+ASAAEAEAISA
Sbjct: 478 PESAPD-SVVLGSPVAPPVNGDMYTDISTENAMVPGTRRTSKGVEYLVEASAAEAEAISA 536
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRAVVV 596
TLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHHRAVVV
Sbjct: 537 TLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRAVVV 596
Query: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLL 656
AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV+AHLL
Sbjct: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLL 656
Query: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFGDLMRL
Sbjct: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRL 716
Query: 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
FDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGNHEAAD
Sbjct: 717 FDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHEAAD 776
Query: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQ 836
INALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIE KIICMHGGIGRSINHVEQ
Sbjct: 777 INALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIENKIICMHGGIGRSINHVEQ 836
Query: 837 IENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
IEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL
Sbjct: 837 IENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
Query: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP
Sbjct: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
Query: 957 AISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
AI+SPETSPERHIEDTWMQELNANRPPTPTRGRPQN
Sbjct: 957 AITSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15223207|ref|NP_172318.1| serine/threonine-protein phosphatase BSL2 [Arabidopsis thaliana] gi|160359046|sp|Q9SJF0.2|BSL2_ARATH RecName: Full=Serine/threonine-protein phosphatase BSL2; AltName: Full=BSU1-like protein 2 gi|332190166|gb|AEE28287.1| serine/threonine-protein phosphatase BSL2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1753 bits (4540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1008 (88%), Positives = 929/1008 (92%), Gaps = 17/1008 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--SGS------PASTTS 47
MD DS+MV + D D + + S MERE Q+ D P GS +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222423388|dbj|BAH19666.1| AT1G08420 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1008 (88%), Positives = 929/1008 (92%), Gaps = 17/1008 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--SGS------PASTTS 47
MD DS+MV + D D + + S MERE Q+ D P GS +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQVNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297843622|ref|XP_002889692.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335534|gb|EFH65951.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 887/1007 (88%), Positives = 926/1007 (91%), Gaps = 16/1007 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQPSGSPASTTSQSQ----- 50
MD DS+MV + D D + + S MERE Q+ D P G T S
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPEGGSVPTPPPSDPNPTS 60
Query: 51 --QQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGT 108
QQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EGT
Sbjct: 61 SPQQAAAVVGQEQQPAQVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGT 120
Query: 109 PGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168
PGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TPF
Sbjct: 121 PGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPF 180
Query: 169 GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228
GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR
Sbjct: 181 GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 240
Query: 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA 288
YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA
Sbjct: 241 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA 300
Query: 289 RSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348
RSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHV
Sbjct: 301 RSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHV 360
Query: 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCR 408
SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCR
Sbjct: 361 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCR 420
Query: 409 HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRY 468
HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGRY
Sbjct: 421 HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRY 480
Query: 469 GFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQ 528
GF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA L GTRR KGVE LV+
Sbjct: 481 GFSDERNRE-LSESATDGAVVLGSPVAPPVNGDMHTDISPENAFLPGTRRTNKGVEYLVE 539
Query: 529 ASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPA 585
ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ PA
Sbjct: 540 ASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPA 599
Query: 586 GVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 645
G+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN
Sbjct: 600 GIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 659
Query: 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 705
SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFGD
Sbjct: 660 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGD 719
Query: 706 LHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765
LHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +NV
Sbjct: 720 LHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNV 779
Query: 766 HLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825
HLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMHG
Sbjct: 780 HLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHG 839
Query: 826 GIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885
GIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD
Sbjct: 840 GIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 899
Query: 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV
Sbjct: 900 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 959
Query: 946 VVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
VVPKLIHPLPPA+SSPETSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 960 VVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPATPTRGRPQN 1006
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 998 | ||||||
| TAIR|locus:2059610 | 1006 | BSL3 "BRI1 suppressor 1 (BSU1) | 0.990 | 0.983 | 0.823 | 0.0 | |
| TAIR|locus:2201776 | 1018 | BSL2 "BRI1 suppressor 1 (BSU1) | 0.927 | 0.909 | 0.859 | 0.0 | |
| TAIR|locus:2139399 | 881 | BSL1 "BRI1 suppressor 1 (BSU1) | 0.428 | 0.485 | 0.741 | 1.9e-287 | |
| TAIR|locus:2825042 | 793 | BSU1 "BRI1 SUPPRESSOR 1" [Arab | 0.342 | 0.431 | 0.632 | 1e-201 | |
| GENEDB_PFALCIPARUM|PF14_0630 | 889 | PF14_0630 "protein serine/thre | 0.271 | 0.304 | 0.511 | 2.2e-115 | |
| UNIPROTKB|Q8IKH5 | 889 | PF14_0630 "Serine/threonine-pr | 0.271 | 0.304 | 0.511 | 2.2e-115 | |
| TAIR|locus:2168484 | 312 | TOPP2 "AT5G59160" [Arabidopsis | 0.288 | 0.923 | 0.488 | 4.4e-68 | |
| TAIR|locus:2063942 | 321 | TOPP4 "type one serine/threoni | 0.298 | 0.928 | 0.473 | 1.9e-67 | |
| TAIR|locus:2180330 | 324 | TOPP8 "AT5G27840" [Arabidopsis | 0.292 | 0.901 | 0.469 | 1.7e-66 | |
| UNIPROTKB|P36874 | 323 | ppp1cc-a "Serine/threonine-pro | 0.299 | 0.925 | 0.455 | 2.3e-66 |
| TAIR|locus:2059610 BSL3 "BRI1 suppressor 1 (BSU1)-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4285 (1513.5 bits), Expect = 0., P = 0.
Identities = 823/999 (82%), Positives = 853/999 (85%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEXXXXXXXXXXXXXX---XXXXXXX 57
MD+DS+MVPE D DP EN S E+E+ ++ +
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPME-EKEEASEQQTGSESESASLTPSLPPPSQQQQQQ 59
Query: 58 XXXXXXXXVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLI 117
VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPRLI
Sbjct: 60 QQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLI 119
Query: 118 LFGGATALEXXXXXXXXXXXXXXXXIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAA 177
LFGGATALE IRLAGATADVHCYDVL+NKWSR+TP+GEPP+PRAA
Sbjct: 120 LFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPRAA 179
Query: 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237
HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG
Sbjct: 180 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 239
Query: 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297
QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC
Sbjct: 240 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 299
Query: 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR 357
GGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGR
Sbjct: 300 GGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGR 359
Query: 358 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 417
MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDL
Sbjct: 360 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDL 419
Query: 418 IFIYGGLRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQ-SRLPGRYGFVDERTR 476
IFIYGGLRGG N R PGRYGF DERT
Sbjct: 420 IFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDERTG 479
Query: 477 QTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGXXXXXXXXXXXXXX 536
+ +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KG
Sbjct: 480 E-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEAEA 537
Query: 537 XXXXXXXXKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRX 593
KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHHR
Sbjct: 538 ISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRA 597
Query: 594 XXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
ETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV+A
Sbjct: 598 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVA 657
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFGDL
Sbjct: 658 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDL 717
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGNHE
Sbjct: 718 MRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHE 777
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 778 AADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 837
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 838 VEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 897
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 898 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 957
Query: 954 LPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQN 992
LPPAI+SPETSPERHIEDTWMQELN NRPPTPTRGRPQN
Sbjct: 958 LPPAITSPETSPERHIEDTWMQELNVNRPPTPTRGRPQN 996
|
|
| TAIR|locus:2201776 BSL2 "BRI1 suppressor 1 (BSU1)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4220 (1490.6 bits), Expect = 0., P = 0.
Identities = 799/930 (85%), Positives = 829/930 (89%)
Query: 66 VVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATAL 125
VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EGTPGYIGPRL+LFGGATAL
Sbjct: 79 VVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATAL 138
Query: 126 EXXXXXXXXXXXXXXXXIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT 185
E IRLAGATADVHCYDVL+NKW+R+TPFGEPPTPRAAHVATAVGT
Sbjct: 139 EGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGT 198
Query: 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245
MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG
Sbjct: 199 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 258
Query: 246 GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305
GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA+SV
Sbjct: 259 GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSV 318
Query: 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSV 365
PLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVEDSSSV
Sbjct: 319 PLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSV 378
Query: 366 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR 425
AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIFIYGGLR
Sbjct: 379 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLR 438
Query: 426 GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQSRLPGRYGFVDERTRQTIPEAAPD 485
GG + RLPGRYGF DER R+ + E+A D
Sbjct: 439 GGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRYGFSDERNRE-LSESAAD 497
Query: 486 GSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGXXXXXXXXXXXXXXXXXXXXXXK 545
G+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KG K
Sbjct: 498 GAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLVEASAAEAEAISATLAAAK 557
Query: 546 ARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRXXXXXXETGG 602
ARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ PAG+RLHHR ETGG
Sbjct: 558 ARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPAGIRLHHRAVVVAAETGG 617
Query: 603 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK 662
ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK
Sbjct: 618 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK 677
Query: 663 PPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 722
PPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFGDLHGQFGDLMRLFDEYGS
Sbjct: 678 PPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 737
Query: 723 PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFG 782
PSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +NVHLIRGNHEAADINALFG
Sbjct: 738 PSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNVHLIRGNHEAADINALFG 797
Query: 783 FRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR 842
FRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMHGGIGRSINHVEQIEN+QR
Sbjct: 798 FRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHGGIGRSINHVEQIENIQR 857
Query: 843 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 902
PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA
Sbjct: 858 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 917
Query: 903 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPE 962
HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA+SSPE
Sbjct: 918 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPE 977
Query: 963 TSPERHIEDTWMQELNANRPPTPTRGRPQN 992
TSPERHIEDTWMQELNANRP TPTRGRPQN
Sbjct: 978 TSPERHIEDTWMQELNANRPATPTRGRPQN 1007
|
|
| TAIR|locus:2139399 BSL1 "BRI1 suppressor 1 (BSU1)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1665 (591.2 bits), Expect = 1.9e-287, Sum P(2) = 1.9e-287
Identities = 319/430 (74%), Positives = 348/430 (80%)
Query: 566 PSGKQMIKP--DSAGSNSIAPAGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRV 623
PS P +S + VRLH R ET G+LGGMVRQLS+DQF+NE RR+
Sbjct: 443 PSTSDASSPIVESTTDGTANEGDVRLHPRAVVVAKETVGSLGGMVRQLSLDQFQNESRRM 502
Query: 624 SYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSA 683
K RQ S + KKVIA LL+PR WKPP R+FFLD E+ +LC +A
Sbjct: 503 VPMNNSDVPQPTKKFTRQKSPQGLHKKVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAA 562
Query: 684 ERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR 743
E+IF E +VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI YIDYLFLGDYVDR
Sbjct: 563 EQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR 622
Query: 744 GQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRI 803
GQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIERMGE DGIWAW R
Sbjct: 623 GQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 682
Query: 804 NRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTE 863
N+LFN+LPLAALIE KIICMHGGIGRSI+ VEQIE ++RPITM+AGS+VLMDLLWSDPTE
Sbjct: 683 NQLFNYLPLAALIENKIICMHGGIGRSISTVEQIEKIERPITMDAGSLVLMDLLWSDPTE 742
Query: 864 NDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFS 923
NDS+EGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDGFERFAQG LITLFS
Sbjct: 743 NDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFS 802
Query: 924 ATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPP 983
ATNYCGTANNAGAILV+GR LV+VPKLIHPLPP I SPE SPE +D WMQELN RPP
Sbjct: 803 ATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPILSPENSPEHSGDDAWMQELNIQRPP 862
Query: 984 TPTRGRPQND 993
TPTRGRPQ D
Sbjct: 863 TPTRGRPQPD 872
|
|
| TAIR|locus:2825042 BSU1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1195 (425.7 bits), Expect = 1.0e-201, Sum P(3) = 1.0e-201
Identities = 219/346 (63%), Positives = 270/346 (78%)
Query: 643 SINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKI 702
S + KKVI+ LL+P+ W PP R FFL E+ LCD E+IF +EP++LQLK PIK+
Sbjct: 448 STQDLHKKVISTLLRPKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKV 507
Query: 703 FGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762
FGD+HGQ+GDLMRLF EYG PS GDI +IDYLFLGDYVDRGQHSLE I LL ALK+EYP
Sbjct: 508 FGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYP 567
Query: 763 NNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIIC 822
N+HLIRGNHE+ +N ++GF EC ERMGE G AW +IN++F++LPLAAL+EKK++C
Sbjct: 568 KNIHLIRGNHESLAMNRIYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLC 627
Query: 823 MHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTF 882
+HGGIGR++ +E+IEN++RP + GS+VL D+LWSDPT ND+V G+ NARG G+V+F
Sbjct: 628 VHGGIGRAVT-IEEIENIERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSF 686
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
GPD V F N L++I+RAHECV+DGFERFA G LIT+FSATNYCGTA NAGAILV+GR
Sbjct: 687 GPDIVKAFLERNGLEMILRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGR 746
Query: 943 DLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRG 988
D+V+ PKLIHP PP ISS E E + + WMQELN PPTP RG
Sbjct: 747 DMVIYPKLIHPHPPPISSSE---EDYTDKAWMQELNIEMPPTPARG 789
|
|
| GENEDB_PFALCIPARUM|PF14_0630 PF14_0630 "protein serine/threonine phosphatase" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 150/293 (51%), Positives = 191/293 (65%)
Query: 718 DEYGSPSTA-GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
++ G A GDI DYLFLGDYVDRG +SLE I LL ALK +YP +HLIRGNHE
Sbjct: 603 EDLGEKLNAIGDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVA 662
Query: 777 INALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV 834
IN+L+GF+ EC R+ E D W++IN++F WLP+ A++E KI+C+HGGIG+SIN +
Sbjct: 663 INSLYGFQEECKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQI 722
Query: 835 EQIENLQRPITMEA-----GSIVLMDLLWSDPTENDSVEGLRPN-ARGPG----LVTFGP 884
I L+RP+ + + DLLWSDPT+NDS+ G PN R P +V +GP
Sbjct: 723 SDISQLKRPLVVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGP 782
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRV +F NDLQLI+RAHECVMDGFERFA G LITLFSATNYC + NAGA+L + RDL
Sbjct: 783 DRVHKFLEENDLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDL 842
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQNDRVAF 997
V+PKLI+P E +TW ++ RPPTP R +P+ + F
Sbjct: 843 TVIPKLIYP---------AKDEVRFFNTWDTKMTELRPPTPPRNQPKMRELNF 886
|
|
| UNIPROTKB|Q8IKH5 PF14_0630 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 150/293 (51%), Positives = 191/293 (65%)
Query: 718 DEYGSPSTA-GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
++ G A GDI DYLFLGDYVDRG +SLE I LL ALK +YP +HLIRGNHE
Sbjct: 603 EDLGEKLNAIGDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVA 662
Query: 777 INALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV 834
IN+L+GF+ EC R+ E D W++IN++F WLP+ A++E KI+C+HGGIG+SIN +
Sbjct: 663 INSLYGFQEECKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQI 722
Query: 835 EQIENLQRPITMEA-----GSIVLMDLLWSDPTENDSVEGLRPN-ARGPG----LVTFGP 884
I L+RP+ + + DLLWSDPT+NDS+ G PN R P +V +GP
Sbjct: 723 SDISQLKRPLVVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGP 782
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRV +F NDLQLI+RAHECVMDGFERFA G LITLFSATNYC + NAGA+L + RDL
Sbjct: 783 DRVHKFLEENDLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDL 842
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQNDRVAF 997
V+PKLI+P E +TW ++ RPPTP R +P+ + F
Sbjct: 843 TVIPKLIYP---------AKDEVRFFNTWDTKMTELRPPTPPRNQPKMRELNF 886
|
|
| TAIR|locus:2168484 TOPP2 "AT5G59160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 148/303 (48%), Positives = 198/303 (65%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R KP + Q L+ +EI LC + IF +P++L+L+APIKI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKPGTK-QAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P TA +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFSVR----LWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +VEQI+N++RP T S +L DLLWSDP+++ V+G N RG TFGPD+V EF
Sbjct: 186 LTNVEQIKNIKRP-TDVPDSGLLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAEF 241
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
ND+ LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 242 LIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI 301
Query: 951 IHP 953
+ P
Sbjct: 302 LKP 304
|
|
| TAIR|locus:2063942 TOPP4 "type one serine/threonine protein phosphatase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 149/315 (47%), Positives = 204/315 (64%)
Query: 640 RQMSINS-VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA 698
+Q +I+S V +I L + R +P +Q L EI LC +A IF +P++L+L+A
Sbjct: 10 QQTAIDSAVLDDIIRRLTEVRLARPG--KQVQLSEAEIKQLCTTARDIFLQQPNLLELEA 67
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
PIKI GD+HGQ+ DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K
Sbjct: 68 PIKICGDIHGQYSDLLRLFEYGGFPPSA------NYLFLGDYVDRGKQSLETICLLLAYK 121
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEK 818
++YP N L+RGNHE A IN ++GF EC R R W FN LP+AALI+
Sbjct: 122 IKYPGNFFLLRGNHECASINRIYGFYDECKRRFNVR----VWKVFTDCFNCLPVAALIDD 177
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
KI+CMHGG+ ++H+++I NL RP TM + +L DLLWSDP ++ V+G N RG
Sbjct: 178 KILCMHGGLSPDLDHLDEIRNLPRP-TMIPDTGLLCDLLWSDPGKD--VKGWGMNDRGVS 234
Query: 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
TFGPD+V EF +DL L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++
Sbjct: 235 Y-TFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMM 293
Query: 939 VLGRDLVVVPKLIHP 953
+ +L+ +++ P
Sbjct: 294 SVDENLMCSFQILKP 308
|
|
| TAIR|locus:2180330 TOPP8 "AT5G27840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 146/311 (46%), Positives = 199/311 (63%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ +G K Q L +EI LC +A +IF S+P++L L API+I GD+HGQ+
Sbjct: 17 IIRRLLEGKGGK-----QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQY 71
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K+ YP+ ++L+RG
Sbjct: 72 QDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRG 125
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AALI++KI+CMHGG+
Sbjct: 126 NHEDAKINRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDEKILCMHGGLSPD 181
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
++++ QI +QRPI + + L DLLWSDP + +EG + RG TFG D+V EF
Sbjct: 182 LDNLNQIREIQRPIEIPDSGL-LCDLLWSDPDQK--IEGWADSDRGISC-TFGADKVAEF 237
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ NDL LI R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV ++
Sbjct: 238 LDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEI 297
Query: 951 IHPLPPAISSP 961
+ P P + S P
Sbjct: 298 MKPAPASSSHP 308
|
|
| UNIPROTKB|P36874 ppp1cc-a "Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 650 (233.9 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 145/318 (45%), Positives = 194/318 (61%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ RG KP Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 12 IIQRLLEVRGSKPGKNVQ--LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 69
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 70 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 123
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 124 NHECASINRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPD 179
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +EQI + RP + + L DLLWSDP ++ V G N RG TFG + V +F
Sbjct: 180 LQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKF 235
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ ++
Sbjct: 236 LHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQI 295
Query: 951 IHPLP---PAISSPETSP 965
+ P P S P T P
Sbjct: 296 LKPAEKKKPNASRPVTPP 313
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SHS7 | BSL3_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.9010 | 0.9889 | 0.9811 | yes | no |
| Q9SJF0 | BSL2_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.8809 | 0.9929 | 0.9734 | no | no |
| Q2QM47 | BSL2_ORYSJ | 3, ., 1, ., 3, ., 1, 6 | 0.8517 | 0.9939 | 0.9831 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00007485001 | RecName- Full=Serine/threonine protein phosphatase; EC=3.1.3.16; (978 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 998 | |||
| cd07419 | 311 | cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho | 0.0 | |
| smart00156 | 271 | smart00156, PP2Ac, Protein phosphatase 2A homologu | 1e-108 | |
| cd07414 | 293 | cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li | 1e-100 | |
| cd07415 | 285 | cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos | 6e-87 | |
| PTZ00480 | 320 | PTZ00480, PTZ00480, serine/threonine-protein phosp | 9e-79 | |
| cd00144 | 225 | cd00144, MPP_PPP_family, phosphoprotein phosphatas | 1e-72 | |
| PTZ00244 | 294 | PTZ00244, PTZ00244, serine/threonine-protein phosp | 3e-69 | |
| cd07416 | 305 | cd07416, MPP_PP2B, PP2B, metallophosphatase domain | 2e-67 | |
| PTZ00239 | 303 | PTZ00239, PTZ00239, serine/threonine protein phosp | 3e-67 | |
| cd07417 | 316 | cd07417, MPP_PP5_C, PP5, C-terminal metallophospha | 2e-66 | |
| cd07420 | 321 | cd07420, MPP_RdgC, Drosophila melanogaster RdgC an | 1e-50 | |
| cd07418 | 377 | cd07418, MPP_PP7, PP7, metallophosphatase domain | 3e-39 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 1e-27 | |
| COG0639 | 155 | COG0639, ApaH, Diadenosine tetraphosphatase and re | 3e-12 | |
| cd07422 | 257 | cd07422, MPP_ApaH, Escherichia coli ApaH and relat | 6e-10 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-09 | |
| cd07424 | 207 | cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophos | 6e-09 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-08 | |
| PRK00166 | 275 | PRK00166, apaH, diadenosine tetraphosphatase; Revi | 5e-07 | |
| PHA02239 | 235 | PHA02239, PHA02239, putative protein phosphatase | 2e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-06 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-06 | |
| cd07425 | 208 | cd07425, MPP_Shelphs, Shewanella-like phosphatases | 7e-06 | |
| cd07421 | 304 | cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo | 2e-05 | |
| pfam07646 | 48 | pfam07646, Kelch_2, Kelch motif | 2e-05 | |
| cd07423 | 234 | cd07423, MPP_PrpE, Bacillus subtilis PrpE and rela | 1e-04 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-04 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 5e-04 | |
| cd07413 | 222 | cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 | 8e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 0.001 | |
| TIGR04075 | 851 | TIGR04075, bacter_Pnkp, polynucleotide kinase-phos | 0.003 | |
| PRK13625 | 245 | PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphospha | 0.004 |
| >gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 630 bits (1626), Expect = 0.0
Identities = 239/311 (76%), Positives = 262/311 (84%), Gaps = 8/311 (2%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I HLLKPR WKPP R+FF + NEI +LCD+AE IF EP VL+L+APIKIFGD+HGQF
Sbjct: 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQF 60
Query: 711 GDLMRLFDEYGSPST--AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLI 768
GDLMRLFDEYGSP T AGDI YIDYLFLGDYVDRG +SLETI LLLALKV+YPN +HLI
Sbjct: 61 GDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLI 120
Query: 769 RGNHEAADINALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826
RGNHE DINALFGFR EC ER+GE DG W RINRLF WLPLAA+IE KI+CMHGG
Sbjct: 121 RGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGG 180
Query: 827 IGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNA---RGPGL-VTF 882
IGRSINHV +IE+L+RP+TME G V+MDLLWSDPTENDSV GLRPNA RGPGL V F
Sbjct: 181 IGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
GPDRV F NDLQ+I+RAHECVMDGFERFAQG LITLFSATNYCGTA NAGAILVLGR
Sbjct: 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGR 300
Query: 943 DLVVVPKLIHP 953
DL ++PKLIHP
Sbjct: 301 DLTIIPKLIHP 311
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 311 |
| >gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Score = 336 bits (863), Expect = e-108
Identities = 127/272 (46%), Positives = 171/272 (62%), Gaps = 14/272 (5%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
EI +L + IF EP+++++ AP+ + GD+HGQF DL+RLFD+ G P +
Sbjct: 4 EEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDKNGQP------PETN 57
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
Y+FLGDYVDRG S+E I LL ALK+ YPN + L+RGNHE+ +N ++GF EC + GE
Sbjct: 58 YVFLGDYVDRGPFSIEVILLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKYGE 117
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
R I+ N F+WLPLAALI KI+CMHGG+ + ++ I L+RP + L
Sbjct: 118 R--IYEK--FNEAFSWLPLAALINGKILCMHGGLSPDLTTLDDIRKLKRPQEPPDDGL-L 172
Query: 854 MDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERF 913
+DLLWSDP V G P+ RG FGPD V EF N+L+LI+RAH+ V DG+E F
Sbjct: 173 IDLLWSDPD--QPVNGFGPSIRGAS-YIFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFF 229
Query: 914 AQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
A G L+T+FSA NYC N A+L + +DL
Sbjct: 230 ADGKLVTIFSAPNYCDRFGNKAAVLKVDKDLK 261
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. Length = 271 |
| >gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-100
Identities = 142/305 (46%), Positives = 192/305 (62%), Gaps = 18/305 (5%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ RG +P + L EI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 5 IIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 62
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 63 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 116
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R I W FN LP+AA+I++KI CMHGG+
Sbjct: 117 NHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPD 172
Query: 831 INHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + G +L DLLWSDP ++ V+G N RG TFG D V +
Sbjct: 173 LQSMEQIRRIMRPTDVPDQG--LLCDLLWSDPDKD--VQGWGENDRGVS-FTFGKDVVAK 227
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F N +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 228 FLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 287
Query: 950 LIHPL 954
++ P
Sbjct: 288 ILKPA 292
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293 |
| >gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 6e-87
Identities = 118/272 (43%), Positives = 164/272 (60%), Gaps = 16/272 (5%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
+E+ LC+ A+ I E +V ++++P+ + GD+HGQF DL+ LF GD +
Sbjct: 18 SEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELF------RVGGDPPDTN 71
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
YLFLGDYVDRG +S+ET LLLALKV YP+ + L+RGNHE+ I ++GF EC+ + G
Sbjct: 72 YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYG- 130
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
W LF++LPLAALI+ +I C+HGG+ SI+ ++QI + R E
Sbjct: 131 --NANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDR--FQEVPHEGP 186
Query: 854 M-DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
M DLLWSDP D +EG + RG G FG D V EF +NN L LI RAH+ VM+G++
Sbjct: 187 MCDLLWSDP---DDIEGWGISPRGAG-YLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQW 242
Query: 913 FAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
L+T++SA NYC N +I+ L L
Sbjct: 243 MFDDKLVTVWSAPNYCYRCGNVASIMELDEHL 274
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285 |
| >gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 9e-79
Identities = 139/315 (44%), Positives = 194/315 (61%), Gaps = 18/315 (5%)
Query: 639 DRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA 698
D++ I+ +I LL RG KP + L E+ LC A IF S+P +L+L+A
Sbjct: 4 DKKGEIDV--DNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEA 59
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
P+KI GD+HGQ+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K
Sbjct: 60 PLKICGDVHGQYFDLLRLFEYGGYPPES------NYLFLGDYVDRGKQSLETICLLLAYK 113
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEK 818
++YP N L+RGNHE A IN ++GF EC R I W FN LP+AALI++
Sbjct: 114 IKYPENFFLLRGNHECASINRIYGFYDECKRRY----TIKLWKTFTDCFNCLPVAALIDE 169
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
KI+CMHGG+ ++++EQI + RP + + L DLLWSDP ++ V+G N RG
Sbjct: 170 KILCMHGGLSPELSNLEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWADNERGVS 226
Query: 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
V F + V F ++L LI RAH+ V DG+E F++ L+TLFSA NYCG +NAG+++
Sbjct: 227 YV-FSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMM 285
Query: 939 VLGRDLVVVPKLIHP 953
+ L+ +++ P
Sbjct: 286 TIDESLMCSFQILKP 300
|
Length = 320 |
| >gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 1e-72
Identities = 103/245 (42%), Positives = 131/245 (53%), Gaps = 27/245 (11%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GD+HG DL+RL ++ G P +FLGDYVDRG S+E I LLLALK+
Sbjct: 2 VIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL- 54
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIE-----RMGERDGIWAWHRINRLFNWLPLAALI 816
P+NV L+RGNHE +N L+GF E R+ ++ G W N +F +LPLAALI
Sbjct: 55 PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALI 114
Query: 817 E-KKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875
E KK++C+HGG+ + EQI+ E DLLWSDP E G
Sbjct: 115 ETKKVLCVHGGLSPGLPLEEQIKEEPEDQLPE-------DLLWSDPLELPGGFGSSRRGG 167
Query: 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935
GP D V F N L+LIVR H V +G+E G+LIT+ S NYCG N
Sbjct: 168 GP-------DAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKL 220
Query: 936 AILVL 940
A LVL
Sbjct: 221 AALVL 225
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225 |
| >gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 3e-69
Identities = 113/293 (38%), Positives = 171/293 (58%), Gaps = 16/293 (5%)
Query: 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 705
S+ + +I +L +G + RQ + +I + IF S+P +L+++ P+++ GD
Sbjct: 2 SLVQTLIEKMLTVKGNRTQ--RQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGD 59
Query: 706 LHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765
HGQ+ DL+R+F++ G P Y +YLFLGDYVDRG+HS+ETITL K+ YP N
Sbjct: 60 THGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENF 113
Query: 766 HLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825
L+RGNHE A IN ++GF + + R I + +FN +P+ +I +KIICMHG
Sbjct: 114 FLLRGNHECASINKMYGF----FDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHG 169
Query: 826 GIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885
G+ + + + ++RP + I L DLLW+DP D V G + RG + FG D
Sbjct: 170 GLSPDLTSLASVNEIERPCDVPDRGI-LCDLLWADP--EDEVRGFLESDRGVSYL-FGED 225
Query: 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
V +F + D+ LIVRAH+ + G+ FA L+T+FSA NYCG +N A++
Sbjct: 226 IVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVM 278
|
Length = 294 |
| >gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 2e-67
Identities = 103/268 (38%), Positives = 144/268 (53%), Gaps = 25/268 (9%)
Query: 683 AERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD 742
I EP++L+++AP+ + GD+HGQF DL++LF+ GSP+ YLFLGDYVD
Sbjct: 28 GAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT------RYLFLGDYVD 81
Query: 743 RGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHR 802
RG S+E + L ALK+ YP + L+RGNHE + F F+ EC + ER +
Sbjct: 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDA 137
Query: 803 INRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM-DLLWSDP 861
F+ LPLAAL+ ++ +C+HGG+ + ++ I L R E + M DLLWSDP
Sbjct: 138 CMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDR--FREPPAFGPMCDLLWSDP 195
Query: 862 TENDSVEGLR----PNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE--RFA 914
E+ E + N RG + V EF N+L I+RAHE G+ R +
Sbjct: 196 LEDFGNEKTQEHFVHNTVRGCSYF-YSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKS 254
Query: 915 QG----HLITLFSATNYCGTANNAGAIL 938
Q LIT+FSA NY NN A+L
Sbjct: 255 QTTGFPSLITIFSAPNYLDVYNNKAAVL 282
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 305 |
| >gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 3e-67
Identities = 112/267 (41%), Positives = 161/267 (60%), Gaps = 15/267 (5%)
Query: 679 LCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
+C+ A+ IF E +V ++AP+ + GD+HGQF DL LF E GDI +Y+F+G
Sbjct: 24 ICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKE------GGDIPNANYIFIG 77
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG +S+ET+ LL LKV+YP N+ L+RGNHE+ ++GF E + + G +
Sbjct: 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSN--- 134
Query: 799 AWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLW 858
W +F+ LPLAALIE +I+C+HGG+ + ++QI + R I + DL+W
Sbjct: 135 PWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMW 193
Query: 859 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-FAQGH 917
SDP E VE N+RG G + FG EFC NDL LI RAH+ VM+G++ F +
Sbjct: 194 SDPEE---VEYWAVNSRGAGYL-FGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQN 249
Query: 918 LITLFSATNYCGTANNAGAILVLGRDL 944
L+T++SA NYC N +IL L +L
Sbjct: 250 LVTVWSAPNYCYRCGNIASILCLDENL 276
|
Length = 303 |
| >gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 2e-66
Identities = 104/275 (37%), Positives = 151/275 (54%), Gaps = 34/275 (12%)
Query: 683 AERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
+ + PS++++ P I + GD HGQF DL+ +F+ G PS YLF G
Sbjct: 41 VKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YLFNG 95
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG S+E I L A K+ YPN+ HL RGNHE ++N ++GF E + E
Sbjct: 96 DFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE----- 150
Query: 799 AWHRINRLF----NWLPLAALIEKKIICMHGGI----GRSINHVEQIENLQRPITMEAGS 850
++ LF NWLPLA LI K++ +HGG+ G +++ + +I+ ++P ++G
Sbjct: 151 ---QMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQP--PDSG- 204
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
++ +LLWSDP G P+ RG G FGPD F N+L+ I+R+HE +G+
Sbjct: 205 -LMCELLWSDPQPQP---GRSPSKRGVGC-QFGPDVTKRFLEENNLEYIIRSHEVKDEGY 259
Query: 911 ERFAQGHLITLFSATNYCGTANNAGA-ILVLGRDL 944
E G IT+FSA NYC N GA I + G DL
Sbjct: 260 EVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDL 294
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 316 |
| >gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 1e-50
Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 44/295 (14%)
Query: 683 AERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
A ++ P++ ++ + I GDLHG+ DL +F + G PS Y+F G
Sbjct: 32 ARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP-----YVFNG 86
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG+ S+E + +L A + YPN VHL RGNHE +N +GF E + + G
Sbjct: 87 DFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYK-LHGKK 145
Query: 799 AWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR---------------- 842
+ +F+WLPLA +I+ KI+ +HGGI S + ++ ++ + R
Sbjct: 146 ILRLLEDVFSWLPLATIIDNKILVVHGGISDSTD-LDLLDKIDRHKYVSVLRPPLRKGME 204
Query: 843 -----------PITMEAGSIVLMDLLWSDPTENDSVEGLRPNA-RGPGLVTFGPDRVMEF 890
P+ +L D+LWSDP +G +PN RG G FGPD +
Sbjct: 205 ELTGEEEDPSEPLDKTEWRQIL-DILWSDPKAQ---KGCKPNTFRGGG-CYFGPDVTSKV 259
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
+ L L++R+HEC +G+E +IT+FSA+NY +N GA + LG DL
Sbjct: 260 LQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 321 |
| >gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-39
Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 66/334 (19%)
Query: 663 PPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL----KAPIKIFGDLHGQFGDLMRLFD 718
PP L N L +A +I EP+ +++ + + GD+HGQ D++ L +
Sbjct: 27 PPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86
Query: 719 EYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778
+ G P Y+F GDYVDRG LET LLL+ KV P+ V+L+RGNHE+
Sbjct: 87 DAGFPD-----QNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCT 141
Query: 779 ALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI------- 831
+++GF E + + G++ G + + F LPLA++I ++ HGG+ RS
Sbjct: 142 SMYGFEQEVLTKYGDK-GKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKK 200
Query: 832 ---NHVEQIENLQRPITMEAGSI--------------------VLMDLLWSDPTENDSVE 868
+ + +++ G++ + D+LWSDP+
Sbjct: 201 QKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTP--- 257
Query: 869 GLRPNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHE------------CVMDGF---ER 912
GL PN RG GL+ +GPD EF N+L+LI+R+HE + G+
Sbjct: 258 GLSPNKQRGIGLL-WGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHD 316
Query: 913 FAQGHLITLFSATNYCG------TANNAGAILVL 940
G LITLFSA +Y NN GA ++L
Sbjct: 317 VESGKLITLFSAPDYPQFQATEERYNNKGAYIIL 350
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 377 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-27
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 72/233 (30%)
Query: 699 PIKIFGDLHGQFGDL---MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLL 755
I + GDLHG DL + L + G P D+ LFLGD VDRG SLE + LL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPK--PDL----VLFLGDLVDRGPPSLEVLALLF 54
Query: 756 ALKVEYPNNVHLIRGNHEAADINALFGFRIECIER---------------------MGER 794
ALK++ P V+L+RGNH+ N+ GF +EC + +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLYGK 114
Query: 795 DGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM 854
G W L + L LAAL++ KI+ +HG + S++ + I
Sbjct: 115 GGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDI----------------- 157
Query: 855 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907
FG + + + +N + L++R H V
Sbjct: 158 -------------------------YLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 3e-12
Identities = 52/157 (33%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 777 INALFGFRIECIERMGERDGIWAWHR-INRLFNWLPLAALIE-KKIICMHGGIGRSINH- 833
+ AL+GF E R + W F+ LPLAA+ E K++C HGG+ ++
Sbjct: 3 LTALYGFYDEK-LRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRL 61
Query: 834 VEQIENLQRPITME-AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 892
++ IE L R E + DLLWSDP D P RG G D F
Sbjct: 62 LDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRR-IWNPGPRGVPR--DGGDVTAVFGI 118
Query: 893 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCG 929
+ +LI RAH G L+T FSA NYC
Sbjct: 119 VHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155
|
Length = 155 |
| >gnl|CDD|163665 cd07422, MPP_ApaH, Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 6e-10
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 702 IFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYL-FLGDYVDRGQHSLETITLLLALKV 759
GD+ G + +L RL ++ P+ D L +GD V+RG SLET+ + +L
Sbjct: 3 AIGDIQGCYDELQRLLEKINFDPAK-------DRLWLVGDLVNRGPDSLETLRFVKSLG- 54
Query: 760 EYPNNVHLIRGNHEAADINAL---FGFRIECIERMGERD---GIWAWHRINRLFNWL--- 810
++ + GNH D++ L G I++ ++D I + L +WL
Sbjct: 55 ---DSAKTVLGNH---DLHLLAVAAG-----IKKPKKKDTLDDILNAPDRDELLDWLRHQ 103
Query: 811 PLAALIEKKIICM-HGGI 827
PL + I M H GI
Sbjct: 104 PLLHRDPELGILMVHAGI 121
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathways in unknown. The PPP (phosphoprotein phosphatase) family, to which ApaH belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and PrpA/PrpB. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 4e-09
Identities = 75/285 (26%), Positives = 105/285 (36%), Gaps = 84/285 (29%)
Query: 82 IEKKEDGPGPRCGHTLTAVA----AVGEEGTPGY-IGPRLILFGGATALEGNSAASGTPS 136
+E+K +GPG RC H + V + G E TP I L +F T S A+G
Sbjct: 156 VEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVP 215
Query: 137 SAGSAGIRLA--GATADV-------------HCYDVLTNKWSRITPFGEPPTPRAAHVAT 181
G+R+ G+T V + +D TN+W +TP E PTPR+ H
Sbjct: 216 HLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMA 275
Query: 182 AVGTMVVIQGGI--------------------------------GPAGLSA--------- 200
A V + GG+ G AGL
Sbjct: 276 ADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVY 335
Query: 201 -------EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPL 253
+D+H D Q +W +V G P R A VG ++++ GG PL
Sbjct: 336 GFNGCEVDDVHYYDPVQD--KWTQVETFGVRPSERSVFASAAVG-KHIVIFGGEIAMDPL 392
Query: 254 ADV---------WALDTAAKPYEWRKLEPEG--EGPPPCMYATAS 287
A V +ALDT + +W +L+ G E P TAS
Sbjct: 393 AHVGPGQLTDGTFALDT--ETLQWERLDKFGEEEETPSSRGWTAS 435
|
Length = 470 |
| >gnl|CDD|163667 cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 6e-09
Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 26/103 (25%)
Query: 704 GDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYLF-LGDYVDRGQHSLETITLLLALKVEY 761
GD+HG + L + D G P D L +GD +DRG SL + LL
Sbjct: 7 GDIHGHYSLLQKALDAVGFDP-------ARDRLISVGDLIDRGPESLACLELL-----LE 54
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRIN 804
P H +RGNHE I+ + N
Sbjct: 55 P-WFHAVRGNHEQM-----------AIDALRAEPLDAVRWLAN 85
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 207 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 4e-08
Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 46/272 (16%)
Query: 169 GEPPTPRAAHVATAVGTMVVIQGG-IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
G+ P PR +H VG + GG + P +DL+V D W + G P
Sbjct: 17 GKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHT--WS--IAPANGDVP 72
Query: 228 R---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR---KLEPEGEGPPPC 281
R G M VG + L GG D KR +D ++ DT EW KL+ EG GP
Sbjct: 73 RISCLGVRMVAVGTK-LYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEG-GPEAR 128
Query: 282 MYATASARSDGLLLLCGGRDASSVPLAS------AYGLAKHRDGRWEWAIAPGVSPSPRY 335
+ + ++ + + + G + AY +A DG+W PG + R
Sbjct: 129 TFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIA---DGKWVQLPDPGENFEKRG 185
Query: 336 QHAAVFVNARLHVSGG----ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYS 391
V ++ V G L GG+ +S++V D A+G W + ++ P
Sbjct: 186 GAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKP------ 239
Query: 392 ADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ R A A VG I I+GG
Sbjct: 240 ------------SARSVFAHAVVGKYIIIFGG 259
|
Length = 341 |
| >gnl|CDD|234673 PRK00166, apaH, diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 5e-07
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 702 IFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYL-FLGDYVDRGQHSLETITLLLALKV 759
GD+ G + +L RL ++ P+ D L +GD V+RG SLE + + +L
Sbjct: 5 AIGDIQGCYDELQRLLEKIDFDPAK-------DTLWLVGDLVNRGPDSLEVLRFVKSLG- 56
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERD---GIWAWHRINRLFNWL---PLA 813
++ + GNH D++ L I+R ++D I + L +WL PL
Sbjct: 57 ---DSAVTVLGNH---DLHLLAVAA--GIKRNKKKDTLDPILEAPDRDELLDWLRHQPLL 108
Query: 814 A-LIEKKIICMHGGI 827
E ++ +H GI
Sbjct: 109 HVDEELGLVMVHAGI 123
|
Length = 275 |
| >gnl|CDD|107154 PHA02239, PHA02239, putative protein phosphatase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + D+HG++ L+ + D+ + + +FLGDYVDRG+ S + + + L
Sbjct: 3 IYVVPDIHGEYQKLLTIMDKINNERKPEETI----VFLGDYVDRGKRSKDVVNYIFDLMS 58
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
N V L+ GNH+ N +E ++R+ D W
Sbjct: 59 NDDNVVTLL-GNHDDEFYNI-----MENVDRLSIYDIEW 91
|
Length = 235 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-06
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ D+HG L + + + + D L LGD V G E + LAL +
Sbjct: 2 VISDIHGNLEALEAVLEAALAAAEKPDF----VLVLGDLVGDGPDPEEVLAAALALLLLL 57
Query: 762 PNNVHLIRGNHE 773
V+++ GNH+
Sbjct: 58 GIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 4e-06
Identities = 68/268 (25%), Positives = 98/268 (36%), Gaps = 33/268 (12%)
Query: 158 LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG-IGPAGLSAEDLHVLDLTQQRPRWH 216
L KW ++ GE P R +H VG + GG P + L+V DL + W
Sbjct: 149 LLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETR--TWS 206
Query: 217 RVVVQGPGPGPR-YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG 275
G P G M +G L GG D R ++ DT EW+ L P
Sbjct: 207 ISPATGDVPHLSCLGVRMVSIGST-LYVFGGRDASRQYNGFYSFDTTTN--EWKLLTPVE 263
Query: 276 EGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY 335
EGP P + + +A + + + G + + +Y + D +W PG S S R
Sbjct: 264 EGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIV---DKKWFHCSTPGDSFSIRG 320
Query: 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAA 395
V ++ V G G V+D V D W ++ P
Sbjct: 321 GAGLEVVQGKVWVVYGF--NGCEVDD---VHYYDPVQDKWTQVETFGVRP---------- 365
Query: 396 GGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ R A+AAVG I I+GG
Sbjct: 366 --------SERSVFASAAVGKHIVIFGG 385
|
Length = 470 |
| >gnl|CDD|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 33/145 (22%), Positives = 45/145 (31%), Gaps = 28/145 (19%)
Query: 703 FGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLF--LGDYVDRGQHSLETITLLLALKVE 760
GDLHG + G + LGD DRG +E + LL L+ E
Sbjct: 3 IGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQE 62
Query: 761 YP---NNVHLIRGNHEA-----------ADINALFGFRIECIERMGERDGIWAWHRINRL 806
VH + GNHE FG + G
Sbjct: 63 AAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELG------- 115
Query: 807 FNWL---PLAALIEKKIICMHGGIG 828
WL P+ + + +HGG+G
Sbjct: 116 -RWLRSKPVIVKVN-DTLFVHGGLG 138
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208 |
| >gnl|CDD|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 704 GDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763
GD+HG L L+ S D A +FLGDY DRG + + I L++L ++P
Sbjct: 8 GDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67
Query: 764 NVHL-IRGNHEAA 775
H+ + GNH+ A
Sbjct: 68 QRHVFLCGNHDFA 80
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 304 |
| >gnl|CDD|116261 pfam07646, Kelch_2, Kelch motif | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 2e-05
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 333 PRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381
PRY HA+V V +L+V GG+ G SS + VLD VW + ++
Sbjct: 1 PRYPHASVVVGGKLYVVGGS--TGLGDLSSSDLWVLDPETNVWTELPAL 47
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Drosophila ring canal kelch protein is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 48 |
| >gnl|CDD|163666 cd07423, MPP_PrpE, Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYID---YLFLGDYVDRGQHSLETITLL 754
P I GD+HG + +L L ++ G G + + + +F+GD VDRG S E + L+
Sbjct: 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLV 61
Query: 755 LALKVEYPNNVHLIRGNHE 773
+++ V + GNH+
Sbjct: 62 MSM-VA-AGAALCVPGNHD 78
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 234 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 4e-04
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 22/138 (15%)
Query: 83 EKKEDGPGPRCGHTLTAVA----AVGEEGTPG-YIGPRLILFGGATALEGNSAASGTPSS 137
+K GPGPRC H + V + G E P +I L +F T + A+G
Sbjct: 14 QKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPR 73
Query: 138 AGSAGIRLAG---------------ATADVHCYDVLTNKWSRITPFGEP--PTPRAAHVA 180
G+R+ +D + YD + N+W+ +T E P R H
Sbjct: 74 ISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSM 133
Query: 181 TAVGTMVVIQGGIGPAGL 198
+ V + GG+ GL
Sbjct: 134 ASDENHVYVFGGVSKGGL 151
|
Length = 341 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 5e-04
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273
PR G + ++G + IGG DG + L+ V D W KL
Sbjct: 1 PRSGAGVVVLGG-KIYVIGGYDGGQSLSSVEVYDPETN--TWSKLPS 44
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID--YLFLGDYVDRGQHSLETITLLLALKV 759
GD+HG L+ L + G +G + + +FLGD +DRG E + ++ ++ V
Sbjct: 3 FIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSM-V 61
Query: 760 EYPNNVHL-IRGNHEAADINAL 780
+ L + GNHE NA+
Sbjct: 62 D--AGHALAVMGNHE---FNAI 78
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 222 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.001
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 227 PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEP 273
PR H +G L GG + L+DVW D + W +L
Sbjct: 1 PRAYHTSTSIGDGRLYLFGGENEDGSVLSDVWVFDLSTN--TWTRLPS 46
|
Length = 49 |
| >gnl|CDD|234457 TIGR04075, bacter_Pnkp, polynucleotide kinase-phosphatase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.003
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDY---------LFLGDYVDRGQHSLE 749
P I GD+HG +L L +E G + +F+GD VDRG S
Sbjct: 181 PFDIIGDVHGCRDELETLLEELGYQIERDEGGRPVDVTHPEGRKAVFVGDLVDRGPDSPG 240
Query: 750 TITLLLALKVEYPNNVHLIRGNHEAADINALFG 782
+ L++ + V + GNH+ + AL G
Sbjct: 241 VLRLVMGM-VA-AGTALCVPGNHDVKLLRALRG 271
|
Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring [Transcription, RNA processing]. Length = 851 |
| >gnl|CDD|184187 PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 24/146 (16%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID---YLFLGDYVDRGQHSLETITLLLA 756
I GD+HG + + L ++ G ++G + D F+GD DRG HSL I ++
Sbjct: 3 YDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWE 62
Query: 757 LKVEYPNNVHLIRGNHEAADINALFGF--------------RIECIERMGERDGIWAWHR 802
L VE + + GNH N L+ F + E + +
Sbjct: 63 L-VEK-KAAYYVPGNH----CNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEK 116
Query: 803 INRLFNWLPL-AALIEKKIICMHGGI 827
L+ PL L E +++ H GI
Sbjct: 117 FITLYEQAPLYHILDEGRLVVAHAGI 142
|
Length = 245 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 998 | |||
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 100.0 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 100.0 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 100.0 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 100.0 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 100.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 100.0 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 100.0 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 100.0 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 100.0 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 100.0 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 100.0 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 100.0 | |
| KOG0375 | 517 | consensus Serine-threonine phosphatase 2B, catalyt | 100.0 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 100.0 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 100.0 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 100.0 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.98 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.98 | |
| PLN02153 | 341 | epithiospecifier protein | 99.98 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 99.98 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 99.98 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.98 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 99.97 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 99.97 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.97 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 99.97 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.97 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.96 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.96 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.95 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.94 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.93 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.93 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 99.93 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 99.93 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.92 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.88 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 99.87 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 99.83 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 99.82 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 99.82 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 99.82 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 99.81 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 99.8 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.78 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.77 | |
| PHA02239 | 235 | putative protein phosphatase | 99.75 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.71 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.67 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.52 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.4 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.2 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 98.97 | |
| COG0639 | 155 | ApaH Diadenosine tetraphosphatase and related seri | 98.81 | |
| PLN02772 | 398 | guanylate kinase | 98.74 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.73 | |
| PLN02772 | 398 | guanylate kinase | 98.71 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.71 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.66 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.61 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.55 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.51 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.47 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.45 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.45 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.44 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.42 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.4 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.34 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.32 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 98.3 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.29 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.27 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.25 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.23 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.17 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 98.07 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.97 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.96 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 97.89 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.88 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 97.87 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 97.87 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.85 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 97.7 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 97.62 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 97.59 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 97.52 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 97.4 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 97.39 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 97.37 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 97.32 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 97.28 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.16 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 97.09 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.02 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.94 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 96.94 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 96.83 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 96.8 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 96.75 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 96.73 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 96.64 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 96.59 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.5 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 96.41 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 96.34 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 96.29 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 96.26 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 96.21 | |
| KOG0918 | 476 | consensus Selenium-binding protein [Inorganic ion | 96.17 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.1 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 96.01 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 95.97 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 95.95 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 95.91 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 95.88 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 95.78 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 95.74 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 95.68 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 95.43 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 95.41 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 95.38 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 95.32 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 95.25 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 95.16 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 95.11 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 95.02 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 94.96 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 94.84 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 94.7 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 94.65 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 94.25 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.22 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 94.1 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 93.42 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 93.33 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 92.74 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 92.65 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 91.79 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 91.31 | |
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 91.29 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 90.32 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 89.98 | |
| PLN02533 | 427 | probable purple acid phosphatase | 89.69 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 89.39 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 88.84 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 88.59 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 88.29 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 87.18 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 86.6 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 86.48 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 85.08 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 84.16 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 83.82 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 82.92 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 82.73 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 82.45 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 80.8 |
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-78 Score=610.12 Aligned_cols=286 Identities=41% Similarity=0.729 Sum_probs=273.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
+++.|+.|++.. .+.+.++..||.++.+||.+|++|++++.|++|||||||||+||+.+|+..|.++..
T Consensus 3 ldr~ie~L~~~~----------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t- 71 (303)
T KOG0372|consen 3 LDRQIEQLRRCE----------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPET- 71 (303)
T ss_pred HHHHHHHHHhcC----------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCC-
Confidence 578899988752 688999999999999999999999999999999999999999999999999988877
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|+|||||||||.+|+|+++||++||++||++|+|||||||++.++..|||++||.+|||. ..+|+.++++|
T Consensus 72 -----~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~---~~vWr~c~eiF 143 (303)
T KOG0372|consen 72 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS---ANVWRYCTEIF 143 (303)
T ss_pred -----ceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCC---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999995 47999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||++|+|+++|||||||++|.+.++++|+.+.|..+++.++ .++|||||||.+ ..||.-++||+| +.||.+++
T Consensus 144 dyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g-~m~DllWSDPee---~~g~~~SPRGaG-ylFG~dvv 218 (303)
T KOG0372|consen 144 DYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDG-AMCDLLWSDPEE---GPGWGLSPRGAG-YLFGEDVV 218 (303)
T ss_pred HhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCC-cchheeccCccc---CCCcccCCCCcc-ccccHHHH
Confidence 9999999999999999999999999999999999999999877 899999999987 369999999999 78999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
++||+.||+++|+|+||.|++||++.++++|+|||||||||++++|.||||.++++....|++|...+..
T Consensus 219 ~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~ 288 (303)
T KOG0372|consen 219 ESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQE 288 (303)
T ss_pred HHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999866543
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-72 Score=619.55 Aligned_cols=321 Identities=47% Similarity=0.801 Sum_probs=287.4
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcC-CCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYG-SPSTA 726 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g-~~~~~ 726 (998)
++++|..++..............|+.+||.+||.++.++|..+|+++++++||+|||||||||.||+++|+..| +|+..
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~ 88 (331)
T KOG0374|consen 9 LDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQ 88 (331)
T ss_pred HHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcc
Confidence 56677777765443333333455999999999999999999999999999999999999999999999999999 88766
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhh
Q 001901 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (998)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (998)
+|||||||||||++|+|||.||+++|++||++||+||||||++.+|..|||++||.+||++ ..+|+.|+++
T Consensus 89 ------~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~ 159 (331)
T KOG0374|consen 89 ------NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDA 159 (331)
T ss_pred ------cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999975 4799999999
Q ss_pred hcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHH
Q 001901 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (998)
Q Consensus 807 f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (998)
|++||++|+|+++|+|+||||+|.+.++++|+.|.||.++++.+ +++|||||||.. .+.||.+|.||.+ +.||+++
T Consensus 160 f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~g-ll~DLlWsdp~~--~~~g~~~n~Rg~s-~~fg~~~ 235 (331)
T KOG0374|consen 160 FNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKG-LLCDLLWSDPDD--DVPGWEENDRGVS-FTFGPAV 235 (331)
T ss_pred HhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccc-eeeeeeecCCCC--CCCCcccCCCcee-eEecHHH
Confidence 99999999999999999999999999999999999998887766 999999999986 4789999999999 8999999
Q ss_pred HHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCCCCCCCCCCc
Q 001901 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPE 966 (998)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 966 (998)
+++||+++++++||||||+|+||||+|++++++||||||+|||.++|+||+|.+++++.+.+++++|..... + +
T Consensus 236 v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~~~~----~--~ 309 (331)
T KOG0374|consen 236 VEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEGGID----K--D 309 (331)
T ss_pred HHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccccccc----c--c
Confidence 999999999999999999999999999999999999999999999999999999999999999999954111 0 1
Q ss_pred ccchhhHHHHhhcCCCCCCCC
Q 001901 967 RHIEDTWMQELNANRPPTPTR 987 (998)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~ 987 (998)
......|..+.+..++.++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~ 330 (331)
T KOG0374|consen 310 KIEALGVGSDKKAILSTSKLS 330 (331)
T ss_pred cccccccccccccccccccCC
Confidence 112234555566667666654
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-71 Score=550.37 Aligned_cols=286 Identities=37% Similarity=0.707 Sum_probs=270.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
.++.|+...+. ..|+++|+..||+.++++|..|.++..++.|+.|+|||||||.||+.+|+..|-.+..
T Consensus 6 ~d~wi~~vk~c----------kyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t- 74 (306)
T KOG0373|consen 6 LDQWIETVKKC----------KYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT- 74 (306)
T ss_pred HHHHHHHHHHc----------CCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCc-
Confidence 45566665443 2689999999999999999999999999999999999999999999999999877655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||+|||||||.+|+|++.+|++||.+||.+|.|||||||.+.+..+|||++||..|||.. .+|+.+.++|
T Consensus 75 -----nYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVF 146 (306)
T KOG0373|consen 75 -----NYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVF 146 (306)
T ss_pred -----ceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999975 7999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
+.|+++|+|+++|||||||++|.+.++++|+-|.|-.+++.++ .+|||+||||.+ ++.|.-++||+| +.||.+++
T Consensus 147 D~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G-~fcDlmWSDPed---ve~W~vSpRGAG-wlFGskVt 221 (306)
T KOG0373|consen 147 DFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEG-PFCDLMWSDPED---VETWAVSPRGAG-WLFGSKVT 221 (306)
T ss_pred hhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCC-CccceeccChhh---hhhheeCCCCcc-eeechhhh
Confidence 9999999999999999999999999999999999999999887 899999999985 788999999999 57999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCe-EEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGH-LITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~-~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
++|+..|+|++|+|+||.|++||++.+++| |+|||||||||++++|.|+||.++++++-++|+|..+|..
T Consensus 222 ~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 222 TEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 999999999999999999999999988888 9999999999999999999999999999999999988765
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-69 Score=588.46 Aligned_cols=294 Identities=46% Similarity=0.835 Sum_probs=275.4
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|+.+++.+.+++. ....|++++|.+||++|+++|++||+++++..|++|||||||||.+|.++|+..++++..
T Consensus 11 ~~~~i~~~~~~~~~~~~--~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~- 87 (320)
T PTZ00480 11 VDNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES- 87 (320)
T ss_pred HHHHHHHHHhccccCcc--ccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc-
Confidence 78899999987666542 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++++||+.+|++||+.||.+|++||||||.+.++..|||+.||..+|+ ..+|..++++|
T Consensus 88 -----~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~----~~l~~~~~~~F 158 (320)
T PTZ00480 88 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT----IKLWKTFTDCF 158 (320)
T ss_pred -----eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 36999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+||+|+++||||||||+|.+.++++|+.+.||.+.+..+ +++|+|||||.+ ...+|.+|+||.| +.||++++
T Consensus 159 ~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWSDP~~--~~~~~~~s~RG~g-~~FG~~~~ 234 (320)
T PTZ00480 159 NCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTG-LLCDLLWSDPDK--DVQGWADNERGVS-YVFSQEIV 234 (320)
T ss_pred HhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccc-hhhheeecCccc--ccCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887654 899999999986 3578999999999 68999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++.|.|.+..
T Consensus 235 ~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 235 QVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred HHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999877654
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-68 Score=584.82 Aligned_cols=286 Identities=33% Similarity=0.604 Sum_probs=256.6
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecC----CeEEEecCCCCHHHHHHHHHHcC
Q 001901 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYG 721 (998)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~----~i~vvGDiHG~~~dL~~il~~~g 721 (998)
+.++++|+.|++.. .|+++++.+||++|+++|++||+|+++.. |++|||||||||.+|+++|+..|
T Consensus 5 ~~~~~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g 74 (321)
T cd07420 5 DHIDALIEAFKEKQ----------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNG 74 (321)
T ss_pred HHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcC
Confidence 34788999998742 47899999999999999999999999986 89999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhh
Q 001901 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (998)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (998)
+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||..+|+.. ...+|.
T Consensus 75 ~~~~~~-----~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~ 148 (321)
T cd07420 75 LPSPEN-----PYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILR 148 (321)
T ss_pred CCCccc-----eEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHH
Confidence 886432 79999999999999999999999999999999999999999999999999999999999863 467999
Q ss_pred hhhhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCccc-----CC---------------------CCcceec
Q 001901 802 RINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-----EA---------------------GSIVLMD 855 (998)
Q Consensus 802 ~~~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~-----~~---------------------~~~~~~d 855 (998)
.++++|++||+||+|+++||||||||++ ..++++|+.|+|+... +. +..++.|
T Consensus 149 ~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 227 (321)
T cd07420 149 LLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILD 227 (321)
T ss_pred HHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhhe
Confidence 9999999999999999999999999997 5789999999885211 11 0136789
Q ss_pred cccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeE
Q 001901 856 LLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935 (998)
Q Consensus 856 lLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~g 935 (998)
+|||||.+. ...|.++.||.| +.||++++++||++||+++||||||++++||+++++++|||||||+||||..+|+|
T Consensus 228 lLWSDP~~~--~~~~~~~~RG~g-~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~g 304 (321)
T cd07420 228 ILWSDPKAQ--KGCKPNTFRGGG-CYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRG 304 (321)
T ss_pred eeecCCccC--CCCCccCCCCCc-cccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccE
Confidence 999999853 233666789999 68999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCceEEeEEe
Q 001901 936 AILVLGRDLVVVPKLI 951 (998)
Q Consensus 936 a~l~~~~~~~~~~~~~ 951 (998)
|+|++++++.+.+..|
T Consensus 305 avl~i~~~~~~~f~~~ 320 (321)
T cd07420 305 AYIKLGPDLTPHFVQY 320 (321)
T ss_pred EEEEECCCCceeEEEe
Confidence 9999999988877655
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-67 Score=584.54 Aligned_cols=303 Identities=79% Similarity=1.341 Sum_probs=279.2
Q ss_pred HHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCC--CC
Q 001901 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA--GD 728 (998)
Q Consensus 651 ~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~--~~ 728 (998)
+|++||+|+.|+++...++.|+++++.+||++|+++|++||+++++..|++|||||||||.+|.++|+.+|+++.. ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4788999999999888888999999999999999999999999999999999999999999999999999988641 22
Q ss_pred ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCC--cchhhhhhhhhh
Q 001901 729 IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGER--DGIWAWHRINRL 806 (998)
Q Consensus 729 ~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~--~~~~~~~~~~~~ 806 (998)
....+|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. ....+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 222379999999999999999999999999999999999999999999999999999999999862 235699999999
Q ss_pred hcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCC---CCCCc-eee
Q 001901 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNA---RGPGL-VTF 882 (998)
Q Consensus 807 f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~---rg~~~-~~f 882 (998)
|++||+++++++++|||||||+|.+.++++|+.+.||...+....+++|+|||||.+.+...+|.++. ||.|. +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998544444589999999999765567888886 99995 799
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEecc
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 953 (998)
|++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|++++++.+.|++|+|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-67 Score=571.14 Aligned_cols=284 Identities=43% Similarity=0.778 Sum_probs=267.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|+++++.. .|+.+++.+||++|+++|++||+++++..|++|||||||||.+|+++|+..++++..
T Consensus 2 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~- 70 (285)
T cd07415 2 LDKWIEQLKKCE----------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDT- 70 (285)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCC-
Confidence 467888887642 478999999999999999999999999999999999999999999999999987765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||.+||..+|+. ..+|+.++++|
T Consensus 71 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f 142 (285)
T cd07415 71 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLF 142 (285)
T ss_pred -----eEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999975 36999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||++|++++++|||||||+|.+.++++|+.++||.+++..+ ++.|+|||||.+. .+|.+|.||.| +.||++++
T Consensus 143 ~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~~---~~~~~~~Rg~g-~~fg~~~~ 217 (285)
T cd07415 143 DYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEG-PMCDLLWSDPDDI---EGWGISPRGAG-YLFGQDVV 217 (285)
T ss_pred HHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCC-CccceEecCCCcc---CCCCcCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887655 8899999999863 68999999999 68999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 955 (998)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.+++++++.++.|.|.+
T Consensus 218 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 218 EEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred HHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988753
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-67 Score=573.72 Aligned_cols=291 Identities=38% Similarity=0.750 Sum_probs=270.2
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCC
Q 001901 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST 725 (998)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~ 725 (998)
++++++|..+++...+.. .....++.++|.+||++|+++|++||+++++..|++|||||||||.+|+++|+..++++.
T Consensus 2 ~~~~~~i~~~~~~~~~~~--~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~ 79 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRT--QRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPY 79 (294)
T ss_pred chHHHHHHHHHhcccCCC--ccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCc
Confidence 356888888888654432 234478999999999999999999999999999999999999999999999999999876
Q ss_pred CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhh
Q 001901 726 AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR 805 (998)
Q Consensus 726 ~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~ 805 (998)
+ +|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+||..+|+ ..+|..+++
T Consensus 80 ~------~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~ 149 (294)
T PTZ00244 80 S------NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN----IKLFKAFTD 149 (294)
T ss_pred c------cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh----HHHHHHHHH
Confidence 5 899999999999999999999999999999999999999999999999999999999996 359999999
Q ss_pred hhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHH
Q 001901 806 LFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885 (998)
Q Consensus 806 ~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~ 885 (998)
+|++||++|++++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||.+ ...+|.+|+||.| +.||++
T Consensus 150 ~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~ 225 (294)
T PTZ00244 150 VFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRG-ILCDLLWADPED--EVRGFLESDRGVS-YLFGED 225 (294)
T ss_pred HHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccc-hhheeeecCccc--ccCCCCcCCCCCc-cccCHH
Confidence 999999999999999999999999999999999999999887654 899999999985 3578999999999 689999
Q ss_pred HHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEec
Q 001901 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 952 (998)
Q Consensus 886 ~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~ 952 (998)
++++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++.|.
T Consensus 226 ~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~ 292 (294)
T PTZ00244 226 IVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIP 292 (294)
T ss_pred HHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEee
Confidence 9999999999999999999999999999999999999999999999999999999999999988764
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-67 Score=574.00 Aligned_cols=291 Identities=48% Similarity=0.865 Sum_probs=270.9
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|+.+++.+.++. .....|+++++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..|+++.+
T Consensus 2 ~~~~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~- 78 (293)
T cd07414 2 IDSIIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 78 (293)
T ss_pred HHHHHHHHHhccccCC--cccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcc-
Confidence 4678888887665543 2344689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++++||+.+|++||+.||.++++||||||.+.++..|||.+||..+|+ ..+|..++++|
T Consensus 79 -----~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~~f 149 (293)
T cd07414 79 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 149 (293)
T ss_pred -----eEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999986 45999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||++|++++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||.. ...+|.+|+||.| +.||++++
T Consensus 150 ~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~ 225 (293)
T cd07414 150 NCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGKDVV 225 (293)
T ss_pred HHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchh-hHhhhhccCccc--ccCCCccCCCCcc-eecCHHHH
Confidence 9999999999999999999999999999999999999877654 899999999986 3578999999999 68999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (998)
++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++.|.|.
T Consensus 226 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 226 AKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred HHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988753
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=571.47 Aligned_cols=286 Identities=41% Similarity=0.749 Sum_probs=266.7
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|+.+++.. .|+++++.+||++|+++|++||+++++..|++|||||||||.+|.++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~- 71 (303)
T PTZ00239 3 IDRHIATLLNGG----------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNA- 71 (303)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 577888887642 478999999999999999999999999999999999999999999999999987655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++++||+.+|++||+.||.+|++||||||.+.++..|||.+||.++|+.. .+|+.++++|
T Consensus 72 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f 143 (303)
T PTZ00239 72 -----NYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVF 143 (303)
T ss_pred -----eEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||++|+|++++|||||||+|.+.++++|+.+.||.+++..+ +++|+|||||.+ ..+|.+|.||.| +.||++++
T Consensus 144 ~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~Rg~g-~~fg~~~~ 218 (303)
T PTZ00239 144 DCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMWSDPEE---VEYWAVNSRGAG-YLFGAKVT 218 (303)
T ss_pred HhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCC-CceeeEecCccc---cCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887655 789999999985 468999999999 68999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecC-CeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQ-GHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~-~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
++||++||+++||||||++++||+++++ ++|||||||||||+..+|+||+|.+++++.+.++.|.|.+..
T Consensus 219 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 219 KEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred HHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 9999999999999999999999998765 559999999999999999999999999999999999987654
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=566.79 Aligned_cols=294 Identities=35% Similarity=0.640 Sum_probs=269.9
Q ss_pred CChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHH
Q 001901 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDE 719 (998)
Q Consensus 644 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~----i~vvGDiHG~~~dL~~il~~ 719 (998)
+.++++++|+.+++.+ .|+.+++.+||++|+++|++||+++++..| ++|||||||||.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~ 81 (316)
T cd07417 12 TLEFVKEMIEWFKDQK----------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFEL 81 (316)
T ss_pred CHHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHh
Confidence 4567899999988742 478999999999999999999999999866 99999999999999999999
Q ss_pred cCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhh
Q 001901 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWA 799 (998)
Q Consensus 720 ~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~ 799 (998)
.|+++... +|||||||||||++|+|||.+|++||+.+|++|++||||||.+.++..|||..||..+|+. .+
T Consensus 82 ~g~~~~~~-----~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~----~l 152 (316)
T cd07417 82 NGLPSETN-----PYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE----QM 152 (316)
T ss_pred cCCCCccC-----eEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccH----HH
Confidence 99876542 7999999999999999999999999999999999999999999999999999999999864 59
Q ss_pred hhhhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCC
Q 001901 800 WHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878 (998)
Q Consensus 800 ~~~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~ 878 (998)
|..++++|++||+++++++++||||||| ++.+.++++|++++||.+.+..+ +++|+|||||.+. .+|.+|.||.|
T Consensus 153 ~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~---~~~~~s~Rg~g 228 (316)
T cd07417 153 FDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSG-LMCELLWSDPQPQ---PGRSPSKRGVG 228 (316)
T ss_pred HHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccc-cceeeeecCCCCC---CCCCccCCCCc
Confidence 9999999999999999999999999999 56788999999999998776544 8999999999863 57999999999
Q ss_pred ceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcC-CceEEeEEeccCCCC
Q 001901 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-DLVVVPKLIHPLPPA 957 (998)
Q Consensus 879 ~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~-~~~~~~~~~~~~~~~ 957 (998)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|+|++ ++.+.++.|.+.+..
T Consensus 229 -~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 229 -CQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred -eEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 689999999999999999999999999999999999999999999999999999999999999 899999999887666
Q ss_pred CCCC
Q 001901 958 ISSP 961 (998)
Q Consensus 958 ~~~~ 961 (998)
...|
T Consensus 308 ~~~~ 311 (316)
T cd07417 308 NVKP 311 (316)
T ss_pred CCCc
Confidence 5433
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-65 Score=560.38 Aligned_cols=288 Identities=35% Similarity=0.623 Sum_probs=262.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++-+++++++.. .|+++++.+||++|+++|++||++++++.|++||||||||+.||.++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~- 71 (305)
T cd07416 3 IDVLKAHFMREG----------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT- 71 (305)
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 345666776542 478999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||+.||.+|++||||||.+.++..|||..||..+|+ ..+|..++++|
T Consensus 72 -----~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f 142 (305)
T cd07416 72 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMEAF 142 (305)
T ss_pred -----eEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999885 46899999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCC----CCcccC-CCCCCceee
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSV----EGLRPN-ARGPGLVTF 882 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~----~~~~~n-~rg~~~~~f 882 (998)
++||+++++++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||...+.. .+|.+| .||.| +.|
T Consensus 143 ~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g-~~f 220 (305)
T cd07416 143 DCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFG-PMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCS-YFY 220 (305)
T ss_pred hhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCC-cceeeeecCcccccccccccccccccCCCCCc-eec
Confidence 9999999999999999999999999999999999998877654 8999999999764321 257776 89999 789
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCC------eEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (998)
|++++++||++||+++||||||++++||++++++ +||||||||||||..+|+||+|.++++. +.++.|.+.+.
T Consensus 221 G~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 221 SYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 9999999999999999999999999999998886 9999999999999999999999999985 68888887765
Q ss_pred CC
Q 001901 957 AI 958 (998)
Q Consensus 957 ~~ 958 (998)
.+
T Consensus 300 ~~ 301 (305)
T cd07416 300 PY 301 (305)
T ss_pred CC
Confidence 43
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=550.67 Aligned_cols=269 Identities=47% Similarity=0.903 Sum_probs=255.2
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHH
Q 001901 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET 750 (998)
Q Consensus 671 ~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev 750 (998)
++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.. +|||||||||||++++||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~------~~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDT------NYVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCc------eEEEeCCccCCCCChHHH
Confidence 35789999999999999999999999999999999999999999999999987665 899999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccCc
Q 001901 751 ITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830 (998)
Q Consensus 751 l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~~ 830 (998)
+.+|++||+.+|.+|++||||||.+.++..|||.+||..+|+. .+|+.++++|++||++|++++++|||||||+|.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~ 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCCc
Confidence 9999999999999999999999999999999999999999963 699999999999999999999999999999999
Q ss_pred ccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccce
Q 001901 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910 (998)
Q Consensus 831 ~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~ 910 (998)
+.++++|+.+.||.+.+... ++.|+|||||.. ...+|.+|.||.| +.||++++++||++||+++||||||++++||
T Consensus 151 ~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 226 (271)
T smart00156 151 LTTLDDIRKLKRPQEPPDEG-LLIDLLWSDPDQ--PVDGFQPSIRGAS-YYFGPDAVDEFLKKNNLKLIIRAHQVVDDGY 226 (271)
T ss_pred cCCHHHHhcccCCCCCCchh-hhhheeecCCCc--ccCCCccCCCCCc-cccCHHHHHHHHHHCCCeEEEecCcccCCcE
Confidence 99999999999998876554 899999999974 3578999999999 6899999999999999999999999999999
Q ss_pred EEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEecc
Q 001901 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (998)
Q Consensus 911 ~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~ 953 (998)
+++++++|||||||+|||+..+|+||+|.+++++.+.++.+.|
T Consensus 227 ~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~ 269 (271)
T smart00156 227 EFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKP 269 (271)
T ss_pred EEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999988875
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-62 Score=546.76 Aligned_cols=300 Identities=33% Similarity=0.577 Sum_probs=258.8
Q ss_pred CChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCeEEEecCCCCHHHHHHHHHH
Q 001901 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDE 719 (998)
Q Consensus 644 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~----~~i~vvGDiHG~~~dL~~il~~ 719 (998)
+.+.++.+|+.+.....--++......|+.++|.+||++|+++|++||++++++ .|++||||||||+.+|+++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 345678888887543221123334456899999999999999999999999998 8999999999999999999999
Q ss_pred cCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhh
Q 001901 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWA 799 (998)
Q Consensus 720 ~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~ 799 (998)
.|+++.+. +|||||||||||++|+|||.+|++||+.||.+|++||||||.+.++..|||.+||..+|+.. +..+
T Consensus 88 ~g~~~~~~-----~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~~~l 161 (377)
T cd07418 88 AGFPDQNR-----FYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-GKHV 161 (377)
T ss_pred hCCCCCCc-----eEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-HHHH
Confidence 99886542 69999999999999999999999999999999999999999999999999999999999864 4579
Q ss_pred hhhhhhhhcccceeEEEcCeEEEecCCc---------------------------cCcccCHHhhhhccCCc-ccCCCC-
Q 001901 800 WHRINRLFNWLPLAALIEKKIICMHGGI---------------------------GRSINHVEQIENLQRPI-TMEAGS- 850 (998)
Q Consensus 800 ~~~~~~~f~~LP~aa~i~~~il~vHgGi---------------------------~~~~~~~~~i~~i~rp~-~~~~~~- 850 (998)
|+.++++|++||++++|++++||||||| ++.+.++++|+.++||. +++..+
T Consensus 162 ~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~ 241 (377)
T cd07418 162 YRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGS 241 (377)
T ss_pred HHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCc
Confidence 9999999999999999999999999999 34567999999999985 444332
Q ss_pred -cceeccccCCCCCCCCCCCcccC-CCCCCceeeCHHHHHHHHHHcCCcEEEEcccc------------cccceEEecC-
Q 001901 851 -IVLMDLLWSDPTENDSVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC------------VMDGFERFAQ- 915 (998)
Q Consensus 851 -~~~~dlLWsDP~~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~------------~~~G~~~~~~- 915 (998)
.+++|||||||.. ..+|.+| .||.| +.||++++++||++|++++||||||| |++||+++++
T Consensus 242 ~~i~~dlLWSDP~~---~~g~~~~~~RG~g-~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~ 317 (377)
T cd07418 242 NLIPGDVLWSDPSL---TPGLSPNKQRGIG-LLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDV 317 (377)
T ss_pred cccceeeEeeCCcc---CCCCCccCCCCCc-cccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccC
Confidence 2478999999986 3578777 79999 68999999999999999999999996 7899999887
Q ss_pred --CeEEEEecccccc------CCCCCeEEEEEEcCCc--eEEeEEecc
Q 001901 916 --GHLITLFSATNYC------GTANNAGAILVLGRDL--VVVPKLIHP 953 (998)
Q Consensus 916 --~~~iTvfSa~~y~------~~~~n~ga~l~~~~~~--~~~~~~~~~ 953 (998)
++||||||||||| +..+|+||+++++.+- ...++.|..
T Consensus 318 ~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~ 365 (377)
T cd07418 318 ESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEA 365 (377)
T ss_pred CCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeec
Confidence 9999999999999 5789999999996643 455555543
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-63 Score=518.44 Aligned_cols=273 Identities=37% Similarity=0.657 Sum_probs=250.9
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHH
Q 001901 670 FLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLE 749 (998)
Q Consensus 670 ~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~e 749 (998)
.|+++..+.|+.++..+|++|++++++.+||.|||||||||.||+++|+..|.|... +|+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t------~YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT------RYLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccc------eeEeeccccccceeeee
Confidence 578999999999999999999999999999999999999999999999999988776 89999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccC
Q 001901 750 TITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829 (998)
Q Consensus 750 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~ 829 (998)
|+.+|.+||+.||..++|||||||++.+..+|.|..||..||.+ .+|+.+.+.|+.||+||+.++.+|||||||+|
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse----~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccH----HHHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 99999999999999999999999999999999999999999965 59999999999999999999999999999999
Q ss_pred cccCHHhhhhccCCcccCCCCcceeccccCCCCCCC----CCCCcccC-CCCCCceeeCHHHHHHHHHHcCCcEEEEccc
Q 001901 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTEND----SVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHE 904 (998)
Q Consensus 830 ~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~----~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~ 904 (998)
.+.+++||++|.|..+++..+ .+||||||||.++. ..+.|.+| .||++ |.|.-.++.+||+.|||--|||+||
T Consensus 210 Ei~tl~DIr~l~RF~EpPa~G-pmCDLLWsDPlEdfgnek~~e~f~hNsvRGCS-yfysy~A~C~FLq~nnLLSIiRAHE 287 (517)
T KOG0375|consen 210 EIHTLDDIRKLDRFKEPPAFG-PMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCS-YFYSYPAVCEFLQNNNLLSIIRAHE 287 (517)
T ss_pred ccccHHHHHhhhhccCCCccC-cchhhhccChhhhccccccccccccCcccccc-ceechHHHHHHHHhCCchhhhhhhh
Confidence 999999999999999999877 89999999998742 13456666 79998 7899999999999999999999999
Q ss_pred ccccceEEecCC------eEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCC
Q 001901 905 CVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (998)
Q Consensus 905 ~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 955 (998)
.+..||+.+-.. .||||||||||.+.++|+||||..+++. +....|.-.|
T Consensus 288 AQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncSP 343 (517)
T KOG0375|consen 288 AQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSP 343 (517)
T ss_pred hhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCCC
Confidence 999999987654 4899999999999999999999998764 3444554333
|
|
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=497.52 Aligned_cols=286 Identities=40% Similarity=0.706 Sum_probs=268.6
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++.-|..|.+.+ .+++.++..||+.|+++|.+|.+|..++.|++||||+||||+||+++|+..|..+..
T Consensus 20 vd~~ie~L~~ck----------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdt- 88 (319)
T KOG0371|consen 20 VDPWIEQLYKCK----------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDT- 88 (319)
T ss_pred cccchHHHHhcC----------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCc-
Confidence 455666666542 578899999999999999999999999999999999999999999999888877765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|+|+|||||||++|+|++.+|.++|++||++|.+||||||.+.+..+|||++||.+|||.. .+|+.|.++|
T Consensus 89 -----nylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlf 160 (319)
T KOG0371|consen 89 -----NYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 160 (319)
T ss_pred -----ceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999975 7999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
+++|+.|+|+++|||+|||++|++.+++.++.+.|-.+++.++ .+||||||||.+ .-||..++||+| +.||.+..
T Consensus 161 dy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evpheg-pmcDlLwsdpdd---r~gwg~sprgag-~tfg~di~ 235 (319)
T KOG0371|consen 161 DYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEG-PMCDLLWSDPDD---RCGWGISPRGAG-YTFGQDIS 235 (319)
T ss_pred hccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCC-ChhheeccCccc---CCCCCCCCCCCC-cccchhhH
Confidence 9999999999999999999999999999999999988888876 788999999985 689999999999 79999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
++|-.+||+++|-|+||.+++||.+.+...++|||||+|||+.++|.+|+|.+++.....+..|.|.+-.
T Consensus 236 ~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 236 EQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred HHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999985543
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-53 Score=453.02 Aligned_cols=280 Identities=33% Similarity=0.637 Sum_probs=247.7
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCeEEEecCCCCHHHHHHHHHHcCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSP 723 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~----~~i~vvGDiHG~~~dL~~il~~~g~~ 723 (998)
++.+|+.+... ..|....+..|+.+|+++|++-|++-+++ ..|.|||||||.++||+-||.+.|+|
T Consensus 121 i~~lieaFk~k----------q~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 121 IDLLIEAFKKK----------QRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred HHHHHHHHHHh----------hhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 56677765432 25678889999999999999999999985 47999999999999999999999999
Q ss_pred CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhh
Q 001901 724 STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRI 803 (998)
Q Consensus 724 ~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~ 803 (998)
+..+ -|||.||+||||.+|+|||++|++|-+.||..+||-|||||+..+|..|||..|+..||... +..+...+
T Consensus 191 S~~n-----pYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~-~k~Ilr~l 264 (631)
T KOG0377|consen 191 SSSN-----PYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRH-GKRILRFL 264 (631)
T ss_pred CCCC-----CeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhc-ccHHHHHH
Confidence 9874 69999999999999999999999999999999999999999999999999999999999765 77888999
Q ss_pred hhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccC---------Cccc--CC----------CCcceeccccCCCC
Q 001901 804 NRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR---------PITM--EA----------GSIVLMDLLWSDPT 862 (998)
Q Consensus 804 ~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~r---------p~~~--~~----------~~~~~~dlLWsDP~ 862 (998)
.++|.|||++.+|+.+||+|||||+.. +.++-|.+|+| |++. +. +.+.+.|+|||||.
T Consensus 265 eevy~WLPi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~ 343 (631)
T KOG0377|consen 265 EEVYRWLPIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQ 343 (631)
T ss_pred HHHHHhcchhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcc
Confidence 999999999999999999999999875 67777777766 2211 00 23457899999998
Q ss_pred CCCCCCCcccC-CCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEc
Q 001901 863 ENDSVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG 941 (998)
Q Consensus 863 ~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~ 941 (998)
.+ .|..|| .||.| ++||+|++.+||++++|+++||+|||.++|||+.++++|+|||||+||.....|+||++.+.
T Consensus 344 ~~---~GC~pNt~RGgG-~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~ 419 (631)
T KOG0377|consen 344 AT---MGCVPNTLRGGG-CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLG 419 (631)
T ss_pred cc---cCCCcccccCCc-ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeC
Confidence 63 677787 69999 57999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEe
Q 001901 942 RDLVVVP 948 (998)
Q Consensus 942 ~~~~~~~ 948 (998)
+.+.-.+
T Consensus 420 ~~~~Phf 426 (631)
T KOG0377|consen 420 NQLTPHF 426 (631)
T ss_pred CCCCchH
Confidence 8775433
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=417.14 Aligned_cols=279 Identities=38% Similarity=0.660 Sum_probs=253.7
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCeeeecC----CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC
Q 001901 671 LDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH 746 (998)
Q Consensus 671 ~~~~~i~~l~~~~~~~~~~ep~~l~~~~----~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~ 746 (998)
|...-...|+..+..+++++|+++++.. .+.|+||+||||.||+++|+..|.|+... .|+|.||+||||..
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~-----~ylfngdfv~rgs~ 257 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN-----PYLFNGDFVDRGSW 257 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc-----cccccCceeeeccc
Confidence 4555677899999999999999999864 48999999999999999999999998764 79999999999999
Q ss_pred hHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCC
Q 001901 747 SLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826 (998)
Q Consensus 747 s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgG 826 (998)
|.|++..+++.|+.+|+++|++|||||...++..|||.+|+..+|.+ ..+..+.++|.+||++-+|+++++.+|||
T Consensus 258 s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte----~~~~~f~~~f~~LPl~~~i~~~~~~~hgg 333 (476)
T KOG0376|consen 258 SVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE----EMFNLFSEVFIWLPLAHLINNKVLVMHGG 333 (476)
T ss_pred ceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH----HHHHhhhhhhccccchhhhcCceEEEecC
Confidence 99999999999999999999999999999999999999999999975 47777789999999999999999999999
Q ss_pred ccC-cccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccc
Q 001901 827 IGR-SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (998)
Q Consensus 827 i~~-~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (998)
+.. .-.++++|++|.|+...+.. ..++|+|||||.. ..|..++.||.| ..||++++++||+.|++++|||+||+
T Consensus 334 lf~~~~v~l~d~r~i~r~~~~~~~-~~~~~~lws~pq~---~~g~s~S~r~~g-~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 334 LFSPDGVTLEDFRNIDRFEQPPEE-GLMCELLWSDPQP---ANGRSPSKRGVG-LQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred cCCCCCccHHHHHhhhhccCCccc-ccccccccCCCcc---ccCCCccccCce-eeeCCCchhhHHhhcchHHHhhcccc
Confidence 954 45689999999999555544 4899999999986 478999999999 58999999999999999999999999
Q ss_pred cccceEEecCCeEEEEeccccccCCCCCeEEEEEEc-CCceEEeEEeccCCCCCCCCCC
Q 001901 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAISSPET 963 (998)
Q Consensus 906 ~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 963 (998)
.+.||++.++|+|+|||||||||...+|.||++.++ ++++.++..|.++|..-.-++.
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ma 467 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPMA 467 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCcc
Confidence 999999999999999999999999999999999998 7888999999888766543333
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=346.70 Aligned_cols=306 Identities=24% Similarity=0.269 Sum_probs=233.4
Q ss_pred eeeeecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEEC
Q 001901 78 VNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV 157 (998)
Q Consensus 78 ~~~~~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~ 157 (998)
|..+....+..|.||.+|+++++ +++||||||...... ...+++|+||+
T Consensus 9 W~~~~~~~~~~P~pR~~h~~~~~------------~~~iyv~GG~~~~~~-------------------~~~~~~~~yd~ 57 (341)
T PLN02153 9 WIKVEQKGGKGPGPRCSHGIAVV------------GDKLYSFGGELKPNE-------------------HIDKDLYVFDF 57 (341)
T ss_pred EEEecCCCCCCCCCCCcceEEEE------------CCEEEEECCccCCCC-------------------ceeCcEEEEEC
Confidence 44443445568999999999998 789999999854221 15689999999
Q ss_pred CCCcEEEecCCCCCCCC-ccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec--CCCCCCCcccEEE
Q 001901 158 LTNKWSRITPFGEPPTP-RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPGPGPRYGHVMA 234 (998)
Q Consensus 158 ~t~~W~~l~~~g~~P~p-R~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~--g~~P~~R~~hs~~ 234 (998)
.+++|+++++++..|.. +.+|++++++++||||||.... ..++++++||+.++ +|+.++.. ...|.+|..|+++
T Consensus 58 ~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~~~ 134 (341)
T PLN02153 58 NTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEK-REFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHSMA 134 (341)
T ss_pred CCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCC-CccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeEEE
Confidence 99999999887644443 4589999999999999998644 34689999999987 59988732 1238899999999
Q ss_pred EECCcEEEEEcCCCCCC------CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC-----
Q 001901 235 LVGQRYLMAIGGNDGKR------PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS----- 303 (998)
Q Consensus 235 ~~~~~~Lyv~GG~~g~~------~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~----- 303 (998)
++++ +||||||.+... .++++++||+.++ +|+.+...+..|.+|..|.++ +.+++|||+||.+..
T Consensus 135 ~~~~-~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~l~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~gG 210 (341)
T PLN02153 135 SDEN-HVYVFGGVSKGGLMKTPERFRTIEAYNIADG--KWVQLPDPGENFEKRGGAGFA-VVQGKIWVVYGFATSILPGG 210 (341)
T ss_pred EECC-EEEEECCccCCCccCCCcccceEEEEECCCC--eEeeCCCCCCCCCCCCcceEE-EECCeEEEEeccccccccCC
Confidence 9987 899999986432 4689999999999 999998877666666666555 468999999997521
Q ss_pred --CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCC-----CccccCCeEEEEECCCCeEE
Q 001901 304 --SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG-----RMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 304 --~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~-----~~~~~~~dv~vyD~~t~~W~ 376 (998)
...+++++.|++.++ +|+.....+..|.+|..|++++++++||||||..... ......+++|+||+.+++|+
T Consensus 211 ~~~~~~~~v~~yd~~~~-~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~ 289 (341)
T PLN02153 211 KSDYESNAVQFFDPASG-KWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWE 289 (341)
T ss_pred ccceecCceEEEEcCCC-cEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEE
Confidence 123678999998876 5555444455688999999999999999999974211 01123679999999999999
Q ss_pred EcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCC-CCcccEEEecc
Q 001901 377 DTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGG-VLLDDLLVAED 438 (998)
Q Consensus 377 ~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyVfGG~~~~-~~l~Dv~~ld~ 438 (998)
.+.....+| +|..|++|+++.+ +++||||||+++. ..++|+|.++.
T Consensus 290 ~~~~~~~~~----------------~pr~~~~~~~~~v~~~~~~~~~gG~~~~~~~~~~~~~~~~ 338 (341)
T PLN02153 290 KLGECGEPA----------------MPRGWTAYTTATVYGKNGLLMHGGKLPTNERTDDLYFYAV 338 (341)
T ss_pred eccCCCCCC----------------CCCccccccccccCCcceEEEEcCcCCCCccccceEEEec
Confidence 987543221 2445665555554 3489999998764 78899999864
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=358.77 Aligned_cols=302 Identities=21% Similarity=0.316 Sum_probs=240.7
Q ss_pred eecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCC
Q 001901 81 VIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTN 160 (998)
Q Consensus 81 ~~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~ 160 (998)
.+...+..|.||++|+++.+ +++||||||....... ..+++|+||+.++
T Consensus 155 ~~~~~~~~P~pR~~h~~~~~------------~~~iyv~GG~~~~~~~-------------------~~~~v~~yD~~~~ 203 (470)
T PLN02193 155 KVEQKGEGPGLRCSHGIAQV------------GNKIYSFGGEFTPNQP-------------------IDKHLYVFDLETR 203 (470)
T ss_pred EcccCCCCCCCccccEEEEE------------CCEEEEECCcCCCCCC-------------------eeCcEEEEECCCC
Confidence 33455668999999999998 7899999997543211 5578999999999
Q ss_pred cEEEecCCCCCCC-CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCc
Q 001901 161 KWSRITPFGEPPT-PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (998)
Q Consensus 161 ~W~~l~~~g~~P~-pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~ 239 (998)
+|+.++.+++.|. +|.+|++++++++||||||.... ..++++|+||+.++ +|+.+.+.+..|.+|+.|+++++++
T Consensus 204 ~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~-~~~ndv~~yD~~t~--~W~~l~~~~~~P~~R~~h~~~~~~~- 279 (470)
T PLN02193 204 TWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS-RQYNGFYSFDTTTN--EWKLLTPVEEGPTPRSFHSMAADEE- 279 (470)
T ss_pred EEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCC-CCCccEEEEECCCC--EEEEcCcCCCCCCCccceEEEEECC-
Confidence 9999988776665 46799999999999999998643 45799999999987 5999986555699999999999987
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~ 319 (998)
+||||||.++...++++++||+.++ +|+.+......|.+|..|.++ +.+++||++||.++. .+++++.|++.++
T Consensus 280 ~iYv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~R~~~~~~-~~~gkiyviGG~~g~--~~~dv~~yD~~t~- 353 (470)
T PLN02193 280 NVYVFGGVSATARLKTLDSYNIVDK--KWFHCSTPGDSFSIRGGAGLE-VVQGKVWVVYGFNGC--EVDDVHYYDPVQD- 353 (470)
T ss_pred EEEEECCCCCCCCcceEEEEECCCC--EEEeCCCCCCCCCCCCCcEEE-EECCcEEEEECCCCC--ccCceEEEECCCC-
Confidence 8999999988888999999999999 999998766666667666555 458999999998654 3789999999876
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCC-----ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCcccc
Q 001901 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADA 394 (998)
Q Consensus 320 ~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~-----~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~ 394 (998)
+|+.....+..|.+|..|+++.++++|||+||...... .....+++|+||+.+++|+.+..+...
T Consensus 354 ~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~~~~~~~~~---------- 423 (470)
T PLN02193 354 KWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGEE---------- 423 (470)
T ss_pred EEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEEEcccCCCC----------
Confidence 66655544556889999999999999999999864211 012357899999999999999876321
Q ss_pred CCCCCccCCCCcceeEEE--EE-C-CEEEEEcCCCC-CCCcccEEEecc
Q 001901 395 AGGDAAVELTRRCRHAAA--AV-G-DLIFIYGGLRG-GVLLDDLLVAED 438 (998)
Q Consensus 395 ~~~~~~~~p~~R~~hsa~--~~-~-~~LyVfGG~~~-~~~l~Dv~~ld~ 438 (998)
...|.+|..|+++ .+ + +.|+||||+++ +.+++|+|.|+.
T Consensus 424 -----~~~P~~R~~~~~~~~~~~~~~~~~~fGG~~~~~~~~~D~~~~~~ 467 (470)
T PLN02193 424 -----EETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGI 467 (470)
T ss_pred -----CCCCCCCccccceeeEEcCCceEEEEcCCCCccccccceEEEec
Confidence 1236688777543 23 3 46999999875 588999999975
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=316.74 Aligned_cols=301 Identities=24% Similarity=0.384 Sum_probs=248.7
Q ss_pred CCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCC-
Q 001901 90 GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF- 168 (998)
Q Consensus 90 ~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~- 168 (998)
+.|.+|+++++ |.+||-|||+-..+..... ---|+++++..+.+|+++++.
T Consensus 12 PrRVNHAavaV------------G~riYSFGGYCsGedy~~~----------------~piDVH~lNa~~~RWtk~pp~~ 63 (392)
T KOG4693|consen 12 PRRVNHAAVAV------------GSRIYSFGGYCSGEDYDAK----------------DPIDVHVLNAENYRWTKMPPGI 63 (392)
T ss_pred cccccceeeee------------cceEEecCCcccccccccC----------------CcceeEEeeccceeEEecCccc
Confidence 46999999999 7999999998765532110 334999999999999999872
Q ss_pred ---------CCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCc
Q 001901 169 ---------GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (998)
Q Consensus 169 ---------g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~ 239 (998)
.-.|--|++|+.+.+.+++||+||.++....-|-+|.||++++ +|.++.+.|-.|..|.+|++|++++
T Consensus 64 ~ka~i~~~yp~VPyqRYGHtvV~y~d~~yvWGGRND~egaCN~Ly~fDp~t~--~W~~p~v~G~vPgaRDGHsAcV~gn- 140 (392)
T KOG4693|consen 64 TKATIESPYPAVPYQRYGHTVVEYQDKAYVWGGRNDDEGACNLLYEFDPETN--VWKKPEVEGFVPGARDGHSACVWGN- 140 (392)
T ss_pred ccccccCCCCccchhhcCceEEEEcceEEEEcCccCcccccceeeeeccccc--cccccceeeecCCccCCceeeEECc-
Confidence 1247779999999999999999999886666689999999997 5999999999999999999999998
Q ss_pred EEEEEcCCCC--CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC-------CcccE
Q 001901 240 YLMAIGGNDG--KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV-------PLASA 310 (998)
Q Consensus 240 ~Lyv~GG~~g--~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~-------~~~dv 310 (998)
.+|||||+.. +.+.+|++.||+.+. +|+.+...+.+|.-|-+|+++++ ++++|||||+..... .+.+.
T Consensus 141 ~MyiFGGye~~a~~FS~d~h~ld~~Tm--tWr~~~Tkg~PprwRDFH~a~~~-~~~MYiFGGR~D~~gpfHs~~e~Yc~~ 217 (392)
T KOG4693|consen 141 QMYIFGGYEEDAQRFSQDTHVLDFATM--TWREMHTKGDPPRWRDFHTASVI-DGMMYIFGGRSDESGPFHSIHEQYCDT 217 (392)
T ss_pred EEEEecChHHHHHhhhccceeEeccce--eeeehhccCCCchhhhhhhhhhc-cceEEEeccccccCCCccchhhhhcce
Confidence 8999999944 667899999999998 99999999998877777877766 799999999854331 22333
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCC
Q 001901 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRY 390 (998)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~ 390 (998)
..+.+..++.|......++.|..|..|++.+++++||+|||+++.-. ...+++|.||+.|..|..+...+.
T Consensus 218 i~~ld~~T~aW~r~p~~~~~P~GRRSHS~fvYng~~Y~FGGYng~ln--~HfndLy~FdP~t~~W~~I~~~Gk------- 288 (392)
T KOG4693|consen 218 IMALDLATGAWTRTPENTMKPGGRRSHSTFVYNGKMYMFGGYNGTLN--VHFNDLYCFDPKTSMWSVISVRGK------- 288 (392)
T ss_pred eEEEeccccccccCCCCCcCCCcccccceEEEcceEEEecccchhhh--hhhcceeecccccchheeeeccCC-------
Confidence 44444556678777677888999999999999999999999987654 458999999999999999887633
Q ss_pred ccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC-------------------CCCcccEEEecccccccc
Q 001901 391 SADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG-------------------GVLLDDLLVAEDLAAAET 444 (998)
Q Consensus 391 ~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~-------------------~~~l~Dv~~ld~~~~~~~ 444 (998)
.|.+|.++++++.+++||+|||... -..++|+.+||..+..++
T Consensus 289 -----------~P~aRRRqC~~v~g~kv~LFGGTsP~~~~~~Spt~~~G~~~~~~LiD~SDLHvLDF~PsLKT 350 (392)
T KOG4693|consen 289 -----------YPSARRRQCSVVSGGKVYLFGGTSPLPCHPLSPTNYNGMISPSGLIDLSDLHVLDFAPSLKT 350 (392)
T ss_pred -----------CCCcccceeEEEECCEEEEecCCCCCCCCCCCccccCCCCCcccccccccceeeecChhHHH
Confidence 3679999999999999999999542 035688888887664443
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=325.78 Aligned_cols=278 Identities=26% Similarity=0.379 Sum_probs=226.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCc--EEEEECCC----CcEEEecCCCCCCCCccceEEEEeCCE
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATAD--VHCYDVLT----NKWSRITPFGEPPTPRAAHVATAVGTM 186 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--v~~yD~~t----~~W~~l~~~g~~P~pR~~hsa~~~~~~ 186 (998)
+++|+.|+|.... .++. +|.+++.+ ++|.++.+.++.|.||.+|++++++++
T Consensus 120 ~~~ivgf~G~~~~----------------------~~~~ig~y~~~~~~~~~~~~W~~~~~~~~~P~pR~~h~~~~~~~~ 177 (470)
T PLN02193 120 GGKIVGFHGRSTD----------------------VLHSLGAYISLPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQVGNK 177 (470)
T ss_pred CCeEEEEeccCCC----------------------cEEeeEEEEecCCChhhhceEEEcccCCCCCCCccccEEEEECCE
Confidence 7899999997643 2333 34557655 799999988888999999999999999
Q ss_pred EEEEeCCCC-CCCCcccEEEEEcCCCCCceEEeeecCCCCCC-CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 187 VVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 187 lyVfGG~~~-~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~-R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
||||||... .....+++|+||+.++ +|+.++..+.+|.. |.+|+++++++ +||||||.++...++++|+||+.++
T Consensus 178 iyv~GG~~~~~~~~~~~v~~yD~~~~--~W~~~~~~g~~P~~~~~~~~~v~~~~-~lYvfGG~~~~~~~ndv~~yD~~t~ 254 (470)
T PLN02193 178 IYSFGGEFTPNQPIDKHLYVFDLETR--TWSISPATGDVPHLSCLGVRMVSIGS-TLYVFGGRDASRQYNGFYSFDTTTN 254 (470)
T ss_pred EEEECCcCCCCCCeeCcEEEEECCCC--EEEeCCCCCCCCCCcccceEEEEECC-EEEEECCCCCCCCCccEEEEECCCC
Confidence 999999753 3334578999999987 59998877767764 67899999988 8999999988778999999999999
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECC
Q 001901 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNA 344 (998)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~ 344 (998)
+|+++.++...|.+|..|++++ .+++||||||.+... .+++++.|++.++ +|+....++.+|.+|.+|+++++++
T Consensus 255 --~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~-~~~~~~~yd~~t~-~W~~~~~~~~~~~~R~~~~~~~~~g 329 (470)
T PLN02193 255 --EWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATA-RLKTLDSYNIVDK-KWFHCSTPGDSFSIRGGAGLEVVQG 329 (470)
T ss_pred --EEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCC-CcceEEEEECCCC-EEEeCCCCCCCCCCCCCcEEEEECC
Confidence 9999988876677888776654 589999999987655 5789999998876 5554444444578899999999999
Q ss_pred EEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCC
Q 001901 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGL 424 (998)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~ 424 (998)
+|||+||.++. ..+++++||+.+++|+++..++. .|.+|..|++++++++||||||.
T Consensus 330 kiyviGG~~g~-----~~~dv~~yD~~t~~W~~~~~~g~------------------~P~~R~~~~~~~~~~~iyv~GG~ 386 (470)
T PLN02193 330 KVWVVYGFNGC-----EVDDVHYYDPVQDKWTQVETFGV------------------RPSERSVFASAAVGKHIVIFGGE 386 (470)
T ss_pred cEEEEECCCCC-----ccCceEEEECCCCEEEEeccCCC------------------CCCCcceeEEEEECCEEEEECCc
Confidence 99999998643 26889999999999999886632 25689999999999999999997
Q ss_pred CC---------CCCcccEEEeccccccc
Q 001901 425 RG---------GVLLDDLLVAEDLAAAE 443 (998)
Q Consensus 425 ~~---------~~~l~Dv~~ld~~~~~~ 443 (998)
.. ..+++|+|.||......
T Consensus 387 ~~~~~~~~~~~~~~~ndv~~~D~~t~~W 414 (470)
T PLN02193 387 IAMDPLAHVGPGQLTDGTFALDTETLQW 414 (470)
T ss_pred cCCccccccCccceeccEEEEEcCcCEE
Confidence 53 24678999999865443
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=312.64 Aligned_cols=310 Identities=27% Similarity=0.415 Sum_probs=260.1
Q ss_pred eeeeeecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEE
Q 001901 77 VVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYD 156 (998)
Q Consensus 77 ~~~~~~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD 156 (998)
-|..+....|..|.||.||-++++ ..-|++|||-+.. ..++++.|+
T Consensus 18 rWrrV~~~tGPvPrpRHGHRAVai------------kELiviFGGGNEG----------------------iiDELHvYN 63 (830)
T KOG4152|consen 18 RWRRVQQSTGPVPRPRHGHRAVAI------------KELIVIFGGGNEG----------------------IIDELHVYN 63 (830)
T ss_pred ceEEEecccCCCCCccccchheee------------eeeEEEecCCccc----------------------chhhhhhhc
Confidence 355566778999999999999999 6789999996542 889999999
Q ss_pred CCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeee----cCCCCCCCcccE
Q 001901 157 VLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV----QGPGPGPRYGHV 232 (998)
Q Consensus 157 ~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~----~g~~P~~R~~hs 232 (998)
..+++|......|+.|.+.+.|+.++.+++||+|||+.+-+.+.||+|.+.... |+|.++.+ .|.+|-||.+|+
T Consensus 64 TatnqWf~PavrGDiPpgcAA~GfvcdGtrilvFGGMvEYGkYsNdLYELQasR--WeWkrlkp~~p~nG~pPCPRlGHS 141 (830)
T KOG4152|consen 64 TATNQWFAPAVRGDIPPGCAAFGFVCDGTRILVFGGMVEYGKYSNDLYELQASR--WEWKRLKPKTPKNGPPPCPRLGHS 141 (830)
T ss_pred cccceeecchhcCCCCCchhhcceEecCceEEEEccEeeeccccchHHHhhhhh--hhHhhcCCCCCCCCCCCCCccCce
Confidence 999999999999999999999999999999999999999999999998776544 68988764 578999999999
Q ss_pred EEEECCcEEEEEcCCCC---------CCCcccEEEEECCCCC--ceEEEcccCCCCCCCccceEEEEEe-----CCEEEE
Q 001901 233 MALVGQRYLMAIGGNDG---------KRPLADVWALDTAAKP--YEWRKLEPEGEGPPPCMYATASARS-----DGLLLL 296 (998)
Q Consensus 233 ~~~~~~~~Lyv~GG~~g---------~~~lndv~~yD~~s~~--~~W~~v~~~~~~P~~r~~~~a~~~~-----~~~lyv 296 (998)
..++++ +.|+|||... -.|+||+|.+++.-.. .-|......+..|++|..|+++++. ..+|||
T Consensus 142 Fsl~gn-KcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRESHTAViY~eKDs~~skmvv 220 (830)
T KOG4152|consen 142 FSLVGN-KCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVIYTEKDSKKSKMVV 220 (830)
T ss_pred eEEecc-EeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCCCCcccceeEEEEeccCCcceEEE
Confidence 999998 8999999732 3469999999997443 5799999999999999999999873 238999
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCC----------CCCccccCCeEE
Q 001901 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG----------GGRMVEDSSSVA 366 (998)
Q Consensus 297 fGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~----------~~~~~~~~~dv~ 366 (998)
|||+.+.. +.|+|.+|..+- +|...+..+..|.||..|+++.++++||||||+-. ...-....+++-
T Consensus 221 yGGM~G~R--LgDLW~Ldl~Tl-~W~kp~~~G~~PlPRSLHsa~~IGnKMyvfGGWVPl~~~~~~~~~hekEWkCTssl~ 297 (830)
T KOG4152|consen 221 YGGMSGCR--LGDLWTLDLDTL-TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTSSLA 297 (830)
T ss_pred Eccccccc--ccceeEEeccee-ecccccccCCCCCCcccccceeecceeEEecceeeeeccccccccccceeeecccee
Confidence 99998765 899999987754 88888888999999999999999999999999721 011113367788
Q ss_pred EEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC-------CCCcccEEEeccc
Q 001901 367 VLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG-------GVLLDDLLVAEDL 439 (998)
Q Consensus 367 vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~-------~~~l~Dv~~ld~~ 439 (998)
++|+.+..|..+-.... .....|.+|.+|+++.++.+|||.-|.+| .....|+|.||+.
T Consensus 298 clNldt~~W~tl~~d~~--------------ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCCkDlWyLdTe 363 (830)
T KOG4152|consen 298 CLNLDTMAWETLLMDTL--------------EDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTE 363 (830)
T ss_pred eeeecchheeeeeeccc--------------cccccccccccceeEEeccEEEEEeccchhhHhhccccchhhhhhhccc
Confidence 99999999998754311 11125889999999999999999999765 4678999999975
Q ss_pred c
Q 001901 440 A 440 (998)
Q Consensus 440 ~ 440 (998)
.
T Consensus 364 k 364 (830)
T KOG4152|consen 364 K 364 (830)
T ss_pred C
Confidence 4
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=333.36 Aligned_cols=266 Identities=23% Similarity=0.393 Sum_probs=241.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
.+.||++||...... ..+.+..||+.++.|..++.+ |.+|..+++++++++||+.||
T Consensus 284 ~~~l~~vGG~~~~~~--------------------~~~~ve~yd~~~~~w~~~a~m---~~~r~~~~~~~~~~~lYv~GG 340 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQ--------------------SLRSVECYDPKTNEWSSLAPM---PSPRCRVGVAVLNGKLYVVGG 340 (571)
T ss_pred CCeEEEECCCCCCCc--------------------ccceeEEecCCcCcEeecCCC---CcccccccEEEECCEEEEEcc
Confidence 578999999986221 778999999999999999998 899999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.+.+...++.+|+||+.+++ |+.++ +|+.+|.+|+++++++ .||++||.+|...++.+++||+.++ +|+.++
T Consensus 341 ~~~~~~~l~~ve~YD~~~~~--W~~~a---~M~~~R~~~~v~~l~g-~iYavGG~dg~~~l~svE~YDp~~~--~W~~va 412 (571)
T KOG4441|consen 341 YDSGSDRLSSVERYDPRTNQ--WTPVA---PMNTKRSDFGVAVLDG-KLYAVGGFDGEKSLNSVECYDPVTN--KWTPVA 412 (571)
T ss_pred ccCCCcccceEEEecCCCCc--eeccC---CccCccccceeEEECC-EEEEEeccccccccccEEEecCCCC--cccccC
Confidence 97555678999999999985 99988 9999999999999998 8999999999999999999999999 999999
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEccc
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGA 352 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~ 352 (998)
++.. ++..+++++.+++||++||.++...+++.+..||+.++ +|...+++ +.+|.++++++++++||++||.
T Consensus 413 ~m~~----~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~---~W~~~~~M-~~~R~~~g~a~~~~~iYvvGG~ 484 (571)
T KOG4441|consen 413 PMLT----RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN---TWTLIAPM-NTRRSGFGVAVLNGKIYVVGGF 484 (571)
T ss_pred CCCc----ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC---ceeecCCc-ccccccceEEEECCEEEEECCc
Confidence 8865 57788888889999999999888878999999999999 88899888 6999999999999999999999
Q ss_pred CCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCccc
Q 001901 353 LGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432 (998)
Q Consensus 353 ~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~D 432 (998)
++.. ....++.||+.+++|+.+..+ ..+|..+++++++++||+.||+++..+++.
T Consensus 485 ~~~~----~~~~VE~ydp~~~~W~~v~~m---------------------~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ 539 (571)
T KOG4441|consen 485 DGTS----ALSSVERYDPETNQWTMVAPM---------------------TSPRSAVGVVVLGGKLYAVGGFDGNNNLNT 539 (571)
T ss_pred cCCC----ccceEEEEcCCCCceeEcccC---------------------ccccccccEEEECCEEEEEecccCccccce
Confidence 8832 256799999999999999877 569999999999999999999999999999
Q ss_pred EEEecccccc
Q 001901 433 LLVAEDLAAA 442 (998)
Q Consensus 433 v~~ld~~~~~ 442 (998)
+..+|...-.
T Consensus 540 ve~ydp~~d~ 549 (571)
T KOG4441|consen 540 VECYDPETDT 549 (571)
T ss_pred eEEcCCCCCc
Confidence 9999765533
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-31 Score=300.45 Aligned_cols=277 Identities=22% Similarity=0.286 Sum_probs=212.2
Q ss_pred CCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEEC--CCCcEEE
Q 001901 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV--LTNKWSR 164 (998)
Q Consensus 87 ~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~--~t~~W~~ 164 (998)
..|.||..++++++ +++|||+||.. .+++|+||+ .+++|..
T Consensus 3 ~lp~~~~~~~~~~~------------~~~vyv~GG~~-------------------------~~~~~~~d~~~~~~~W~~ 45 (346)
T TIGR03547 3 DLPVGFKNGTGAII------------GDKVYVGLGSA-------------------------GTSWYKLDLKKPSKGWQK 45 (346)
T ss_pred CCCccccCceEEEE------------CCEEEEEcccc-------------------------CCeeEEEECCCCCCCceE
Confidence 46889999888888 78999999962 246899996 5788999
Q ss_pred ecCCCCCC-CCccceEEEEeCCEEEEEeCCCCCC-----CCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEE-EEC
Q 001901 165 ITPFGEPP-TPRAAHVATAVGTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA-LVG 237 (998)
Q Consensus 165 l~~~g~~P-~pR~~hsa~~~~~~lyVfGG~~~~~-----~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~-~~~ 237 (998)
++.+ | .+|..|++++++++|||+||..... ..++++|+||+.++ +|+.+. ..+|.+|.+|+++ +++
T Consensus 46 l~~~---p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~--~W~~~~--~~~p~~~~~~~~~~~~~ 118 (346)
T TIGR03547 46 IADF---PGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKN--SWQKLD--TRSPVGLLGASGFSLHN 118 (346)
T ss_pred CCCC---CCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCC--EEecCC--CCCCCcccceeEEEEeC
Confidence 9887 6 5899999999999999999985322 24689999999997 499986 2467788888877 566
Q ss_pred CcEEEEEcCCCCCC----------------------------------CcccEEEEECCCCCceEEEcccCCCCCCCccc
Q 001901 238 QRYLMAIGGNDGKR----------------------------------PLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (998)
Q Consensus 238 ~~~Lyv~GG~~g~~----------------------------------~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~ 283 (998)
+ +||++||.++.. .++++++||+.++ +|+.+.+++ ..++.
T Consensus 119 g-~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~--~W~~~~~~p---~~~r~ 192 (346)
T TIGR03547 119 G-QAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTN--QWRNLGENP---FLGTA 192 (346)
T ss_pred C-EEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCC--ceeECccCC---CCcCC
Confidence 6 899999986421 2478999999999 999997663 22455
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-------ceeEEEEECCEEEEEcccCCCC
Q 001901 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-------YQHAAVFVNARLHVSGGALGGG 356 (998)
Q Consensus 284 ~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR-------~~hsav~~~~~L~V~GG~~~~~ 356 (998)
+++++..+++|||+||.........+++.|+...+ +.+|...+.+ |.+| .+|++++++++|||+||.+...
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y~~~~~-~~~W~~~~~m-~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~~~~ 270 (346)
T TIGR03547 193 GSAIVHKGNKLLLINGEIKPGLRTAEVKQYLFTGG-KLEWNKLPPL-PPPKSSSQEGLAGAFAGISNGVLLVAGGANFPG 270 (346)
T ss_pred CceEEEECCEEEEEeeeeCCCccchheEEEEecCC-CceeeecCCC-CCCCCCccccccEEeeeEECCEEEEeecCCCCC
Confidence 66677779999999998655434456666654211 2266667665 3443 4677888999999999986321
Q ss_pred Cc-------------cccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcC
Q 001901 357 RM-------------VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423 (998)
Q Consensus 357 ~~-------------~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG 423 (998)
.. ......+++||+++++|+.+..+ |.+|..+++++++++|||+||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~l---------------------p~~~~~~~~~~~~~~iyv~GG 329 (346)
T TIGR03547 271 AQENYKNGKLYAHEGLIKAWSSEVYALDNGKWSKVGKL---------------------PQGLAYGVSVSWNNGVLLIGG 329 (346)
T ss_pred chhhhhcCCccccCCCCceeEeeEEEecCCcccccCCC---------------------CCCceeeEEEEcCCEEEEEec
Confidence 10 00124689999999999999877 668889999999999999999
Q ss_pred CCC-CCCcccEEEe
Q 001901 424 LRG-GVLLDDLLVA 436 (998)
Q Consensus 424 ~~~-~~~l~Dv~~l 436 (998)
.+. +..++|++.+
T Consensus 330 ~~~~~~~~~~v~~~ 343 (346)
T TIGR03547 330 ENSGGKAVTDVYLL 343 (346)
T ss_pred cCCCCCEeeeEEEE
Confidence 875 4778998765
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-31 Score=310.03 Aligned_cols=297 Identities=31% Similarity=0.515 Sum_probs=248.9
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCC-cEEEEECCCCc
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATA-DVHCYDVLTNK 161 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv~~yD~~t~~ 161 (998)
...+..|.+|++|+++.+ ++++|||||....... .+ |+|+||..+..
T Consensus 52 ~~~~~~p~~R~~hs~~~~------------~~~~~vfGG~~~~~~~--------------------~~~dl~~~d~~~~~ 99 (482)
T KOG0379|consen 52 DVLGVGPIPRAGHSAVLI------------GNKLYVFGGYGSGDRL--------------------TDLDLYVLDLESQL 99 (482)
T ss_pred ccCCCCcchhhccceeEE------------CCEEEEECCCCCCCcc--------------------ccceeEEeecCCcc
Confidence 356789999999999999 7899999998776531 22 79999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|......|..|.+|++|++++++++||+|||........++++.||+.+.+ |..+.+.+.+|.+|.+|+++++++ +|
T Consensus 100 w~~~~~~g~~p~~r~g~~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~t~~--W~~l~~~~~~P~~r~~Hs~~~~g~-~l 176 (482)
T KOG0379|consen 100 WTKPAATGDEPSPRYGHSLSAVGDKLYLFGGTDKKYRNLNELHSLDLSTRT--WSLLSPTGDPPPPRAGHSATVVGT-KL 176 (482)
T ss_pred cccccccCCCCCcccceeEEEECCeEEEEccccCCCCChhheEeccCCCCc--EEEecCcCCCCCCcccceEEEECC-EE
Confidence 999999999999999999999999999999997656668999999999985 999999999999999999999997 89
Q ss_pred EEEcCCCCCC-CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001901 242 MAIGGNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (998)
Q Consensus 242 yv~GG~~g~~-~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~ 320 (998)
|||||.+... .+||+|+||+.+. +|.++...+..|.||..|+++++ ++++++|||.+.....++|+|.|+..+
T Consensus 177 ~vfGG~~~~~~~~ndl~i~d~~~~--~W~~~~~~g~~P~pR~gH~~~~~-~~~~~v~gG~~~~~~~l~D~~~ldl~~--- 250 (482)
T KOG0379|consen 177 VVFGGIGGTGDSLNDLHIYDLETS--TWSELDTQGEAPSPRYGHAMVVV-GNKLLVFGGGDDGDVYLNDVHILDLST--- 250 (482)
T ss_pred EEECCccCcccceeeeeeeccccc--cceecccCCCCCCCCCCceEEEE-CCeEEEEeccccCCceecceEeeeccc---
Confidence 9999998866 8999999999999 99999999999999988887777 778888888775555899999999986
Q ss_pred EEEEECC--CCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCC
Q 001901 321 WEWAIAP--GVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (998)
Q Consensus 321 W~w~~~~--g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (998)
|.|.... +..|.+|+.|+.+..+.+++|+||...... ..+.++|.||.++..|..+.....
T Consensus 251 ~~W~~~~~~g~~p~~R~~h~~~~~~~~~~l~gG~~~~~~--~~l~~~~~l~~~~~~w~~~~~~~~--------------- 313 (482)
T KOG0379|consen 251 WEWKLLPTGGDLPSPRSGHSLTVSGDHLLLFGGGTDPKQ--EPLGDLYGLDLETLVWSKVESVGV--------------- 313 (482)
T ss_pred ceeeeccccCCCCCCcceeeeEEECCEEEEEcCCccccc--ccccccccccccccceeeeecccc---------------
Confidence 5666444 778999999999999999999999876421 237899999999999999988741
Q ss_pred CccCCCCcceeEEEEECCE----EEEEcCCC-CCCCcccEEEeccc
Q 001901 399 AAVELTRRCRHAAAAVGDL----IFIYGGLR-GGVLLDDLLVAEDL 439 (998)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~----LyVfGG~~-~~~~l~Dv~~ld~~ 439 (998)
..+.+|..|+++..... ..++||.. .....++++.+...
T Consensus 314 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (482)
T KOG0379|consen 314 --VRPSPRLGHAAELIDELGKDGLGILGGNQILGERLADVFSLQIK 357 (482)
T ss_pred --ccccccccccceeeccCCccceeeecCccccccchhhccccccc
Confidence 22568999998888553 44455522 23456666655443
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=293.62 Aligned_cols=283 Identities=16% Similarity=0.199 Sum_probs=208.8
Q ss_pred CCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCC--CcEEEecC
Q 001901 90 GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT--NKWSRITP 167 (998)
Q Consensus 90 ~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t--~~W~~l~~ 167 (998)
..+.||.+.++ ++.|||+||.+..... ....|.+ ..++++|+|+... .+|..+..
T Consensus 2 ~~~~g~~~~~~------------~~~l~v~GG~~~~~~~---------~~~~g~~--~~~~~v~~~~~~~~~~~W~~~~~ 58 (323)
T TIGR03548 2 LGVAGCYAGII------------GDYILVAGGCNFPEDP---------LAEGGKK--KNYKGIYIAKDENSNLKWVKDGQ 58 (323)
T ss_pred CceeeEeeeEE------------CCEEEEeeccCCCCCc---------hhhCCcE--EeeeeeEEEecCCCceeEEEccc
Confidence 45778888888 7999999999764310 0001111 2778999996333 37999887
Q ss_pred CCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceE-EeeecCCCCCCCcccEEEEECCcEEEEEcC
Q 001901 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGPGPRYGHVMALVGQRYLMAIGG 246 (998)
Q Consensus 168 ~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~-~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG 246 (998)
+ |.+|..|++++++++||++||.... ..++++++||+.++. |. .+...+++|.+|..|+++++++ +|||+||
T Consensus 59 l---p~~r~~~~~~~~~~~lyviGG~~~~-~~~~~v~~~d~~~~~--w~~~~~~~~~lp~~~~~~~~~~~~~-~iYv~GG 131 (323)
T TIGR03548 59 L---PYEAAYGASVSVENGIYYIGGSNSS-ERFSSVYRITLDESK--EELICETIGNLPFTFENGSACYKDG-TLYVGGG 131 (323)
T ss_pred C---CccccceEEEEECCEEEEEcCCCCC-CCceeEEEEEEcCCc--eeeeeeEcCCCCcCccCceEEEECC-EEEEEeC
Confidence 6 8899989999999999999998643 356899999998875 52 2233348999999999999987 8999999
Q ss_pred CCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEEC
Q 001901 247 NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIA 326 (998)
Q Consensus 247 ~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~ 326 (998)
......++++|+||+.++ +|+++++++. .++.+++++..+++||||||.++.. ..+++.|++.++ +|..+
T Consensus 132 ~~~~~~~~~v~~yd~~~~--~W~~~~~~p~---~~r~~~~~~~~~~~iYv~GG~~~~~--~~~~~~yd~~~~---~W~~~ 201 (323)
T TIGR03548 132 NRNGKPSNKSYLFNLETQ--EWFELPDFPG---EPRVQPVCVKLQNELYVFGGGSNIA--YTDGYKYSPKKN---QWQKV 201 (323)
T ss_pred cCCCccCceEEEEcCCCC--CeeECCCCCC---CCCCcceEEEECCEEEEEcCCCCcc--ccceEEEecCCC---eeEEC
Confidence 876667899999999999 9999976532 1344555667799999999986543 467899999877 55555
Q ss_pred CCC----CCCCcceeEE-EEECCEEEEEcccCCCCC----------------------------ccccCCeEEEEECCCC
Q 001901 327 PGV----SPSPRYQHAA-VFVNARLHVSGGALGGGR----------------------------MVEDSSSVAVLDTAAG 373 (998)
Q Consensus 327 ~g~----~P~pR~~hsa-v~~~~~L~V~GG~~~~~~----------------------------~~~~~~dv~vyD~~t~ 373 (998)
+.+ .|..+..+++ ++.+++|||+||.+.... .....+++++||+.++
T Consensus 202 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 281 (323)
T TIGR03548 202 ADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTG 281 (323)
T ss_pred CCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhCCCccccCcCceEEEEECCCC
Confidence 543 2334444544 445789999999864210 0011367999999999
Q ss_pred eEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC-CCCccc
Q 001901 374 VWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG-GVLLDD 432 (998)
Q Consensus 374 ~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~-~~~l~D 432 (998)
+|+.++.++ ..+|..++++.++++||++||... +.+..+
T Consensus 282 ~W~~~~~~p--------------------~~~r~~~~~~~~~~~iyv~GG~~~pg~rt~~ 321 (323)
T TIGR03548 282 KWKSIGNSP--------------------FFARCGAALLLTGNNIFSINGELKPGVRTPD 321 (323)
T ss_pred eeeEccccc--------------------ccccCchheEEECCEEEEEeccccCCcCCcC
Confidence 999998651 148999999999999999999643 344443
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-30 Score=294.02 Aligned_cols=260 Identities=25% Similarity=0.398 Sum_probs=201.5
Q ss_pred CCCcEEEecCC-CCCCCCccceEEEEeCCEEEEEeCCCCC-CCCcccEEEEEcCCCCCceEEeeecCCCCCC-CcccEEE
Q 001901 158 LTNKWSRITPF-GEPPTPRAAHVATAVGTMVVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP-RYGHVMA 234 (998)
Q Consensus 158 ~t~~W~~l~~~-g~~P~pR~~hsa~~~~~~lyVfGG~~~~-~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~-R~~hs~~ 234 (998)
....|.++... +..|.||.+|++++++++|||+||.... ....+++|+||+.++ +|+.+++.+..|.. +.+|+++
T Consensus 5 ~~~~W~~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~p~~~~~~~~~~ 82 (341)
T PLN02153 5 LQGGWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTH--TWSIAPANGDVPRISCLGVRMV 82 (341)
T ss_pred cCCeEEEecCCCCCCCCCCCcceEEEECCEEEEECCccCCCCceeCcEEEEECCCC--EEEEcCccCCCCCCccCceEEE
Confidence 45679999874 3469999999999999999999998532 334689999999997 59998865555543 4588999
Q ss_pred EECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCC--CCCCCccceEEEEEeCCEEEEEeccCCCC-----CCc
Q 001901 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG--EGPPPCMYATASARSDGLLLLCGGRDASS-----VPL 307 (998)
Q Consensus 235 ~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~--~~P~~r~~~~a~~~~~~~lyvfGG~~~~~-----~~~ 307 (998)
++++ +||+|||.++...++++++||+.++ +|+.+..+. ..|.+|..|++ ++.+++||||||.+... ..+
T Consensus 83 ~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~ 158 (341)
T PLN02153 83 AVGT-KLYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHSM-ASDENHVYVFGGVSKGGLMKTPERF 158 (341)
T ss_pred EECC-EEEEECCCCCCCccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeEE-EEECCEEEEECCccCCCccCCCccc
Confidence 9998 8999999988778899999999999 999987653 23556666655 55699999999986432 235
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCC----CCccccCCeEEEEECCCCeEEEcccCcC
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~----~~~~~~~~dv~vyD~~t~~W~~v~~~~~ 383 (998)
++++.|++.++ +|+.....+.+|.+|.+|++++++++|||+||.... +......+++++||+.+++|+++...+.
T Consensus 159 ~~v~~yd~~~~-~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~ 237 (341)
T PLN02153 159 RTIEAYNIADG-KWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGA 237 (341)
T ss_pred ceEEEEECCCC-eEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCC
Confidence 78999998877 444333333346789999999999999999997531 1111226789999999999999876522
Q ss_pred CCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCC---------CCCCcccEEEecccccc
Q 001901 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR---------GGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~---------~~~~l~Dv~~ld~~~~~ 442 (998)
.|.+|..|++++++++||||||.. .+.+++|+|.||.....
T Consensus 238 ------------------~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~ 287 (341)
T PLN02153 238 ------------------KPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLV 287 (341)
T ss_pred ------------------CCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccE
Confidence 256899999999999999999963 23567899999976543
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=272.92 Aligned_cols=228 Identities=24% Similarity=0.374 Sum_probs=205.1
Q ss_pred CCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEec
Q 001901 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (998)
Q Consensus 87 ~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (998)
..|..|+|||.+.+ .+++||+||.+..++ ..|-+|+||+.++.|.+..
T Consensus 74 ~VPyqRYGHtvV~y------------~d~~yvWGGRND~eg--------------------aCN~Ly~fDp~t~~W~~p~ 121 (392)
T KOG4693|consen 74 AVPYQRYGHTVVEY------------QDKAYVWGGRNDDEG--------------------ACNLLYEFDPETNVWKKPE 121 (392)
T ss_pred ccchhhcCceEEEE------------cceEEEEcCccCccc--------------------ccceeeeeccccccccccc
Confidence 46889999999999 799999999998775 8899999999999999999
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeCCCCC-CCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEc
Q 001901 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (998)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~-~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~G 245 (998)
..|-.|.+|.+|++|++++.+|||||+.+. ...++|++.+|+.+.+ |+.+.+.|..|.=|..|+++++++ .+||||
T Consensus 122 v~G~vPgaRDGHsAcV~gn~MyiFGGye~~a~~FS~d~h~ld~~Tmt--Wr~~~Tkg~PprwRDFH~a~~~~~-~MYiFG 198 (392)
T KOG4693|consen 122 VEGFVPGARDGHSACVWGNQMYIFGGYEEDAQRFSQDTHVLDFATMT--WREMHTKGDPPRWRDFHTASVIDG-MMYIFG 198 (392)
T ss_pred eeeecCCccCCceeeEECcEEEEecChHHHHHhhhccceeEecccee--eeehhccCCCchhhhhhhhhhccc-eEEEec
Confidence 999999999999999999999999998643 4567999999999985 999999999999999999999997 899999
Q ss_pred CCCC---------CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC-CCcccEEEEec
Q 001901 246 GNDG---------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAK 315 (998)
Q Consensus 246 G~~g---------~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~-~~~~dv~~~~~ 315 (998)
|... ..+.+.+-.||+.+. .|......+..|..|+.|++.++ +++||+|||+++.- ..++|+|.|++
T Consensus 199 GR~D~~gpfHs~~e~Yc~~i~~ld~~T~--aW~r~p~~~~~P~GRRSHS~fvY-ng~~Y~FGGYng~ln~HfndLy~FdP 275 (392)
T KOG4693|consen 199 GRSDESGPFHSIHEQYCDTIMALDLATG--AWTRTPENTMKPGGRRSHSTFVY-NGKMYMFGGYNGTLNVHFNDLYCFDP 275 (392)
T ss_pred cccccCCCccchhhhhcceeEEEecccc--ccccCCCCCcCCCcccccceEEE-cceEEEecccchhhhhhhcceeeccc
Confidence 9843 234677889999999 99999888888999999987776 99999999997643 46899999999
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccC
Q 001901 316 HRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGAL 353 (998)
Q Consensus 316 ~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~ 353 (998)
.+. .|....+.+.-|.+|..+++++.++++|+|||..
T Consensus 276 ~t~-~W~~I~~~Gk~P~aRRRqC~~v~g~kv~LFGGTs 312 (392)
T KOG4693|consen 276 KTS-MWSVISVRGKYPSARRRQCSVVSGGKVYLFGGTS 312 (392)
T ss_pred ccc-hheeeeccCCCCCcccceeEEEECCEEEEecCCC
Confidence 876 8998999998899999999999999999999964
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=312.83 Aligned_cols=247 Identities=13% Similarity=0.137 Sum_probs=207.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
..+++||+.+++|..++++ |.+|..|++++++++|||+||........+++++||+.++. |..++ +||.+|.
T Consensus 272 ~~v~~yd~~~~~W~~l~~m---p~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~--W~~~~---~m~~~R~ 343 (557)
T PHA02713 272 PCILVYNINTMEYSVISTI---PNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKI--HVELP---PMIKNRC 343 (557)
T ss_pred CCEEEEeCCCCeEEECCCC---CccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCe--EeeCC---CCcchhh
Confidence 4789999999999999887 88999999999999999999975444557899999999974 99887 8999999
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC-----
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS----- 304 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~----- 304 (998)
.|+++++++ +||++||.++...++++++||+.++ +|+.+++++. +|..+ ++++.+++||++||.++..
T Consensus 344 ~~~~~~~~g-~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~mp~---~r~~~-~~~~~~g~IYviGG~~~~~~~~~~ 416 (557)
T PHA02713 344 RFSLAVIDD-TIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDMPI---ALSSY-GMCVLDQYIYIIGGRTEHIDYTSV 416 (557)
T ss_pred ceeEEEECC-EEEEECCcCCCCCCceEEEEECCCC--eEEECCCCCc---ccccc-cEEEECCEEEEEeCCCcccccccc
Confidence 999999998 8999999988777899999999999 9999987644 35444 4556699999999986431
Q ss_pred ------------CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCC
Q 001901 305 ------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (998)
Q Consensus 305 ------------~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t 372 (998)
..++.++.|++.++ +|..++++ +.+|..+++++++++|||+||.++... ..+.+++||+++
T Consensus 417 ~~~~~~~~~~~~~~~~~ve~YDP~td---~W~~v~~m-~~~r~~~~~~~~~~~IYv~GG~~~~~~---~~~~ve~Ydp~~ 489 (557)
T PHA02713 417 HHMNSIDMEEDTHSSNKVIRYDTVNN---IWETLPNF-WTGTIRPGVVSHKDDIYVVCDIKDEKN---VKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccccceEEEECCCCC---eEeecCCC-CcccccCcEEEECCEEEEEeCCCCCCc---cceeEEEecCCC
Confidence 12578999999988 77777776 688999999999999999999875332 135689999999
Q ss_pred -CeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCcccEEEecccccc
Q 001901 373 -GVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 373 -~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~Dv~~ld~~~~~ 442 (998)
++|+.++.+ |.+|..+++++++++||++||+++. .++.++|...-.
T Consensus 490 ~~~W~~~~~m---------------------~~~r~~~~~~~~~~~iyv~Gg~~~~---~~~e~yd~~~~~ 536 (557)
T PHA02713 490 YNGWELITTT---------------------ESRLSALHTILHDNTIMMLHCYESY---MLQDTFNVYTYE 536 (557)
T ss_pred CCCeeEcccc---------------------CcccccceeEEECCEEEEEeeecce---eehhhcCccccc
Confidence 899999988 6799999999999999999998863 356666655433
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=296.85 Aligned_cols=283 Identities=19% Similarity=0.243 Sum_probs=213.4
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECC--CC
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TN 160 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--t~ 160 (998)
......|.||..++++.+ +++|||+||... +.+|+||+. ++
T Consensus 20 ~~l~~lP~~~~~~~~~~~------------~~~iyv~gG~~~-------------------------~~~~~~d~~~~~~ 62 (376)
T PRK14131 20 EQLPDLPVPFKNGTGAID------------NNTVYVGLGSAG-------------------------TSWYKLDLNAPSK 62 (376)
T ss_pred ccCCCCCcCccCCeEEEE------------CCEEEEEeCCCC-------------------------CeEEEEECCCCCC
Confidence 445678999998888887 789999999621 257899986 47
Q ss_pred cEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCC-----CCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEE
Q 001901 161 KWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235 (998)
Q Consensus 161 ~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~-----~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~ 235 (998)
+|..++++ +..+|.+|++++++++|||+||.... ...++++|+||+.++ +|+.++. ..|.+|.+|++++
T Consensus 63 ~W~~l~~~--p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n--~W~~~~~--~~p~~~~~~~~~~ 136 (376)
T PRK14131 63 GWTKIAAF--PGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTN--SWQKLDT--RSPVGLAGHVAVS 136 (376)
T ss_pred CeEECCcC--CCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCC--EEEeCCC--CCCCcccceEEEE
Confidence 89999876 12589999999999999999998641 134689999999987 4999872 3477888898877
Q ss_pred -ECCcEEEEEcCCCCC----------------------------------CCcccEEEEECCCCCceEEEcccCCCCCCC
Q 001901 236 -VGQRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (998)
Q Consensus 236 -~~~~~Lyv~GG~~g~----------------------------------~~lndv~~yD~~s~~~~W~~v~~~~~~P~~ 280 (998)
.++ +||++||.+.. ...+++++||+.++ +|+.+.++ |.+
T Consensus 137 ~~~~-~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~--~W~~~~~~---p~~ 210 (376)
T PRK14131 137 LHNG-KAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN--QWKNAGES---PFL 210 (376)
T ss_pred eeCC-EEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC--eeeECCcC---CCC
Confidence 555 89999998642 12478999999999 99998754 333
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEe--cCCCCeEEEEECCCCCCCCcc--------eeEEEEECCEEEEEc
Q 001901 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLA--KHRDGRWEWAIAPGVSPSPRY--------QHAAVFVNARLHVSG 350 (998)
Q Consensus 281 r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~--~~~~~~W~w~~~~g~~P~pR~--------~hsav~~~~~L~V~G 350 (998)
++.+++++..+++|||+||.........++|.|. +..+ +|..++.+ |.+|. ++.+++++++|||+|
T Consensus 211 ~~~~~a~v~~~~~iYv~GG~~~~~~~~~~~~~~~~~~~~~---~W~~~~~~-p~~~~~~~~~~~~~~~a~~~~~~iyv~G 286 (376)
T PRK14131 211 GTAGSAVVIKGNKLWLINGEIKPGLRTDAVKQGKFTGNNL---KWQKLPDL-PPAPGGSSQEGVAGAFAGYSNGVLLVAG 286 (376)
T ss_pred CCCcceEEEECCEEEEEeeeECCCcCChhheEEEecCCCc---ceeecCCC-CCCCcCCcCCccceEeceeECCEEEEee
Confidence 4566677778999999999865544455666554 3433 66677655 34442 344678899999999
Q ss_pred ccCCCCCc-------------cccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCE
Q 001901 351 GALGGGRM-------------VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 417 (998)
Q Consensus 351 G~~~~~~~-------------~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~ 417 (998)
|.+..... ......+++||+++++|+.+..+ |.+|..|++++++++
T Consensus 287 G~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~l---------------------p~~r~~~~av~~~~~ 345 (376)
T PRK14131 287 GANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNGKWQKVGEL---------------------PQGLAYGVSVSWNNG 345 (376)
T ss_pred ccCCCCChhhhhcCCcccccCCcceeehheEEecCCcccccCcC---------------------CCCccceEEEEeCCE
Confidence 98642210 01123578999999999998877 678999999999999
Q ss_pred EEEEcCCCC-CCCcccEEEeccc
Q 001901 418 IFIYGGLRG-GVLLDDLLVAEDL 439 (998)
Q Consensus 418 LyVfGG~~~-~~~l~Dv~~ld~~ 439 (998)
|||+||... ...++|++.++..
T Consensus 346 iyv~GG~~~~~~~~~~v~~~~~~ 368 (376)
T PRK14131 346 VLLIGGETAGGKAVSDVTLLSWD 368 (376)
T ss_pred EEEEcCCCCCCcEeeeEEEEEEc
Confidence 999999764 4679999988743
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=306.62 Aligned_cols=244 Identities=24% Similarity=0.426 Sum_probs=217.2
Q ss_pred eeecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCccccccccCCcEEEEECC
Q 001901 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL 158 (998)
Q Consensus 80 ~~~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~ 158 (998)
..+......|.+|..|+++++ +++||++||.+. .. ..+.+++||+.
T Consensus 311 ~~w~~~a~m~~~r~~~~~~~~------------~~~lYv~GG~~~~~~---------------------~l~~ve~YD~~ 357 (571)
T KOG4441|consen 311 NEWSSLAPMPSPRCRVGVAVL------------NGKLYVVGGYDSGSD---------------------RLSSVERYDPR 357 (571)
T ss_pred CcEeecCCCCcccccccEEEE------------CCEEEEEccccCCCc---------------------ccceEEEecCC
Confidence 344566788999999999999 789999999984 32 78999999999
Q ss_pred CCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECC
Q 001901 159 TNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238 (998)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~ 238 (998)
+++|+.++++ ..+|..|++++++++||+.||.+ +...++.+++||+.++ +|+.+. +|+.+|++|+++++++
T Consensus 358 ~~~W~~~a~M---~~~R~~~~v~~l~g~iYavGG~d-g~~~l~svE~YDp~~~--~W~~va---~m~~~r~~~gv~~~~g 428 (571)
T KOG4441|consen 358 TNQWTPVAPM---NTKRSDFGVAVLDGKLYAVGGFD-GEKSLNSVECYDPVTN--KWTPVA---PMLTRRSGHGVAVLGG 428 (571)
T ss_pred CCceeccCCc---cCccccceeEEECCEEEEEeccc-cccccccEEEecCCCC--cccccC---CCCcceeeeEEEEECC
Confidence 9999999998 89999999999999999999996 4556789999999998 599997 8999999999999998
Q ss_pred cEEEEEcCCCCCC-CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC
Q 001901 239 RYLMAIGGNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (998)
Q Consensus 239 ~~Lyv~GG~~g~~-~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~ 317 (998)
+||++||.++.. +++.+++||+.++ +|+.++++.. ++.++++++.+++||++||+++ ...+..++.|++.+
T Consensus 429 -~iYi~GG~~~~~~~l~sve~YDP~t~--~W~~~~~M~~----~R~~~g~a~~~~~iYvvGG~~~-~~~~~~VE~ydp~~ 500 (571)
T KOG4441|consen 429 -KLYIIGGGDGSSNCLNSVECYDPETN--TWTLIAPMNT----RRSGFGVAVLNGKIYVVGGFDG-TSALSSVERYDPET 500 (571)
T ss_pred -EEEEEcCcCCCccccceEEEEcCCCC--ceeecCCccc----ccccceEEEECCEEEEECCccC-CCccceEEEEcCCC
Confidence 899999999877 8999999999999 9999999977 5666667777999999999998 44677899999999
Q ss_pred CCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 318 ~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
+ +|..++++ +.+|..++++.+++++|++||+++... ++.+..||+.+++|+....+
T Consensus 501 ~---~W~~v~~m-~~~rs~~g~~~~~~~ly~vGG~~~~~~----l~~ve~ydp~~d~W~~~~~~ 556 (571)
T KOG4441|consen 501 N---QWTMVAPM-TSPRSAVGVVVLGGKLYAVGGFDGNNN----LNTVECYDPETDTWTEVTEP 556 (571)
T ss_pred C---ceeEcccC-ccccccccEEEECCEEEEEecccCccc----cceeEEcCCCCCceeeCCCc
Confidence 9 77777665 689999999999999999999877654 78999999999999998874
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=277.15 Aligned_cols=218 Identities=47% Similarity=0.755 Sum_probs=174.7
Q ss_pred EEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhh
Q 001901 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780 (998)
Q Consensus 701 ~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ 780 (998)
+|||||||++.+|.++|+.++....+ .+||||||||||+++.||+.+|+.++.. |.++++||||||.+.++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d------~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~ 73 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFL 73 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCC------EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhh
Confidence 58999999999999999999886554 8999999999999999999999999888 8899999999999998887
Q ss_pred cCChHHHH-----HHhCCCcchhhhhhhhhhhcccceeEEEcC-eEEEecCCccCcccCHHhhhhccCCcccCCCCccee
Q 001901 781 FGFRIECI-----ERMGERDGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM 854 (998)
Q Consensus 781 ~gf~~e~~-----~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~ 854 (998)
+++..+.. ..........++..+.++|..||+++.++. +++|||||+.+.....+++. ..+ ......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~-~~~~~~ 146 (225)
T cd00144 74 YGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEP-EDQLPE 146 (225)
T ss_pred cCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCc-ccccce
Confidence 77664421 001111234577888899999999999987 99999999998866554444 111 123678
Q ss_pred ccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCe
Q 001901 855 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNA 934 (998)
Q Consensus 855 dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ 934 (998)
+++|++|.... .....+.|+. |+++++.|++.++.++|||||+++..|+.....+++|||+|++.|++..+|.
T Consensus 147 ~~lw~r~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~ 219 (225)
T cd00144 147 DLLWSDPLELP--GGFGSSRRGG-----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNK 219 (225)
T ss_pred eeeecCCCCCC--CCCcCCCCCC-----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCcc
Confidence 99999997532 2222333433 8999999999999999999999999998767789999999999998877777
Q ss_pred EEEEE
Q 001901 935 GAILV 939 (998)
Q Consensus 935 ga~l~ 939 (998)
.+++.
T Consensus 220 l~~~~ 224 (225)
T cd00144 220 LAALV 224 (225)
T ss_pred EEEEe
Confidence 77654
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=276.80 Aligned_cols=267 Identities=27% Similarity=0.473 Sum_probs=220.9
Q ss_pred eeecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCC
Q 001901 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (998)
Q Consensus 80 ~~~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (998)
.+.+....+|.||.+.++++-+. .+.|++|||...+.... -+++|+|.||+.+
T Consensus 55 ~~~e~~~~~PspRsn~sl~~nPe----------keELilfGGEf~ngqkT-----------------~vYndLy~Yn~k~ 107 (521)
T KOG1230|consen 55 HVVETSVPPPSPRSNPSLFANPE----------KEELILFGGEFYNGQKT-----------------HVYNDLYSYNTKK 107 (521)
T ss_pred eeeeccCCCCCCCCCcceeeccC----------cceeEEecceeecceeE-----------------EEeeeeeEEeccc
Confidence 34566778999999999999754 56899999987654321 1899999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeC-CEEEEEeCCCC--C---CCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEE
Q 001901 160 NKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGP--A---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVM 233 (998)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~-~~lyVfGG~~~--~---~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~ 233 (998)
++|+++..- +.|.||++|.++++. +.+|+|||.-. . .....|+|+||+.++ +|.++...| .|.+|.+|-|
T Consensus 108 ~eWkk~~sp-n~P~pRsshq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~tr--kweql~~~g-~PS~RSGHRM 183 (521)
T KOG1230|consen 108 NEWKKVVSP-NAPPPRSSHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTR--KWEQLEFGG-GPSPRSGHRM 183 (521)
T ss_pred cceeEeccC-CCcCCCccceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccc--hheeeccCC-CCCCCcccee
Confidence 999999643 469999999999996 79999999532 1 234699999999998 599998665 7999999999
Q ss_pred EEECCcEEEEEcCCCC----CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC-------
Q 001901 234 ALVGQRYLMAIGGNDG----KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA------- 302 (998)
Q Consensus 234 ~~~~~~~Lyv~GG~~g----~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~------- 302 (998)
+++.. +|++|||+.. ..|+||+|+||+.+- +|+++.+.+..|.+|.++...+..++.|||.||+..
T Consensus 184 vawK~-~lilFGGFhd~nr~y~YyNDvy~FdLdty--kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~ 260 (521)
T KOG1230|consen 184 VAWKR-QLILFGGFHDSNRDYIYYNDVYAFDLDTY--KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDV 260 (521)
T ss_pred EEeee-eEEEEcceecCCCceEEeeeeEEEeccce--eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhh
Confidence 99998 8999999954 346999999999888 999999988889999999888888999999999742
Q ss_pred -CCCCcccEEEEecCC--CCeEEEEECC--CCCCCCcceeEEEEEC-CEEEEEcccCCCC-----CccccCCeEEEEECC
Q 001901 303 -SSVPLASAYGLAKHR--DGRWEWAIAP--GVSPSPRYQHAAVFVN-ARLHVSGGALGGG-----RMVEDSSSVAVLDTA 371 (998)
Q Consensus 303 -~~~~~~dv~~~~~~~--~~~W~w~~~~--g~~P~pR~~hsav~~~-~~L~V~GG~~~~~-----~~~~~~~dv~vyD~~ 371 (998)
.+...+|+|.+++.. ..+|.|..+. ++.|.||.++++++.. ++-+.|||..+-. -.....|++|.||+.
T Consensus 261 dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt 340 (521)
T KOG1230|consen 261 DKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLT 340 (521)
T ss_pred hcCceeeeeeeecCCcCCCcceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheecc
Confidence 345689999998876 4589998886 6889999999999885 5999999986511 111348999999999
Q ss_pred CCeEEEccc
Q 001901 372 AGVWCDTKS 380 (998)
Q Consensus 372 t~~W~~v~~ 380 (998)
.++|.....
T Consensus 341 ~nrW~~~ql 349 (521)
T KOG1230|consen 341 RNRWSEGQL 349 (521)
T ss_pred cchhhHhhh
Confidence 999987643
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=301.82 Aligned_cols=241 Identities=11% Similarity=0.120 Sum_probs=200.5
Q ss_pred ecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 82 ~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
+......|.+|.+|+++++ +++||++||...... .++++++||+.+++
T Consensus 284 W~~l~~mp~~r~~~~~a~l------------~~~IYviGG~~~~~~--------------------~~~~v~~Yd~~~n~ 331 (557)
T PHA02713 284 YSVISTIPNHIINYASAIV------------DNEIIIAGGYNFNNP--------------------SLNKVYKINIENKI 331 (557)
T ss_pred EEECCCCCccccceEEEEE------------CCEEEEEcCCCCCCC--------------------ccceEEEEECCCCe
Confidence 3445578899999999988 799999999753221 56899999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|..++++ |.+|..|++++++++||++||.+. ....+++++||+.+++ |+.++ ++|.+|.+|+++++++ +|
T Consensus 332 W~~~~~m---~~~R~~~~~~~~~g~IYviGG~~~-~~~~~sve~Ydp~~~~--W~~~~---~mp~~r~~~~~~~~~g-~I 401 (557)
T PHA02713 332 HVELPPM---IKNRCRFSLAVIDDTIYAIGGQNG-TNVERTIECYTMGDDK--WKMLP---DMPIALSSYGMCVLDQ-YI 401 (557)
T ss_pred EeeCCCC---cchhhceeEEEECCEEEEECCcCC-CCCCceEEEEECCCCe--EEECC---CCCcccccccEEEECC-EE
Confidence 9999887 899999999999999999999853 3456889999999984 99988 8999999999999987 89
Q ss_pred EEEcCCCCCC------------------CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001901 242 MAIGGNDGKR------------------PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (998)
Q Consensus 242 yv~GG~~g~~------------------~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~ 303 (998)
|++||.++.. .++.+++||+.++ +|+.++++.. +|. .+++++.+++||++||.++.
T Consensus 402 YviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m~~---~r~-~~~~~~~~~~IYv~GG~~~~ 475 (557)
T PHA02713 402 YIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNFWT---GTI-RPGVVSHKDDIYVVCDIKDE 475 (557)
T ss_pred EEEeCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCCCc---ccc-cCcEEEECCEEEEEeCCCCC
Confidence 9999986421 3678999999999 9999988754 244 45566779999999998754
Q ss_pred CCCcccEEEEecCC-CCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 304 SVPLASAYGLAKHR-DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 304 ~~~~~dv~~~~~~~-~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
....+.++.|++.+ + +|..++.+ |.+|..+++++++++|||+||+++. .++++||+.|++|+.+.+.
T Consensus 476 ~~~~~~ve~Ydp~~~~---~W~~~~~m-~~~r~~~~~~~~~~~iyv~Gg~~~~-------~~~e~yd~~~~~W~~~~~~ 543 (557)
T PHA02713 476 KNVKTCIFRYNTNTYN---GWELITTT-ESRLSALHTILHDNTIMMLHCYESY-------MLQDTFNVYTYEWNHICHQ 543 (557)
T ss_pred CccceeEEEecCCCCC---CeeEcccc-CcccccceeEEECCEEEEEeeecce-------eehhhcCcccccccchhhh
Confidence 43345678999998 6 56666665 7899999999999999999998762 3689999999999988765
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-29 Score=291.73 Aligned_cols=248 Identities=31% Similarity=0.496 Sum_probs=217.3
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcc-cEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEc
Q 001901 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAE-DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (998)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~-dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~G 245 (998)
..+..|.+|++|+++.+++++|||||........+ |+|+||+.+. .|......|..|.+|++|+++++++ +||+||
T Consensus 53 ~~~~~p~~R~~hs~~~~~~~~~vfGG~~~~~~~~~~dl~~~d~~~~--~w~~~~~~g~~p~~r~g~~~~~~~~-~l~lfG 129 (482)
T KOG0379|consen 53 VLGVGPIPRAGHSAVLIGNKLYVFGGYGSGDRLTDLDLYVLDLESQ--LWTKPAATGDEPSPRYGHSLSAVGD-KLYLFG 129 (482)
T ss_pred cCCCCcchhhccceeEECCEEEEECCCCCCCccccceeEEeecCCc--ccccccccCCCCCcccceeEEEECC-eEEEEc
Confidence 45567999999999999999999999865544333 6999999986 5999999999999999999999998 899999
Q ss_pred CCCC-CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001901 246 GNDG-KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (998)
Q Consensus 246 G~~g-~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~ 324 (998)
|.+. ...+++++.||+.+. +|..+.+.+.+|++|.+|+++++ +++||||||.+.....++++|.|+..+. +|...
T Consensus 130 G~~~~~~~~~~l~~~d~~t~--~W~~l~~~~~~P~~r~~Hs~~~~-g~~l~vfGG~~~~~~~~ndl~i~d~~~~-~W~~~ 205 (482)
T KOG0379|consen 130 GTDKKYRNLNELHSLDLSTR--TWSLLSPTGDPPPPRAGHSATVV-GTKLVVFGGIGGTGDSLNDLHIYDLETS-TWSEL 205 (482)
T ss_pred cccCCCCChhheEeccCCCC--cEEEecCcCCCCCCcccceEEEE-CCEEEEECCccCcccceeeeeeeccccc-cceec
Confidence 9984 666899999999999 99999999998888988888877 6999999999888778999999999877 68888
Q ss_pred ECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCC
Q 001901 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELT 404 (998)
Q Consensus 325 ~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~ 404 (998)
.+.+..|.||++|++++++++++|+||.+... .+++|+|+||+.+.+|.++...+ ..|.
T Consensus 206 ~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~---~~l~D~~~ldl~~~~W~~~~~~g------------------~~p~ 264 (482)
T KOG0379|consen 206 DTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGD---VYLNDVHILDLSTWEWKLLPTGG------------------DLPS 264 (482)
T ss_pred ccCCCCCCCCCCceEEEECCeEEEEeccccCC---ceecceEeeecccceeeeccccC------------------CCCC
Confidence 88899999999999999999999999988433 35899999999999999776653 3377
Q ss_pred CcceeEEEEECCEEEEEcCCCCC-C-CcccEEEecccccc
Q 001901 405 RRCRHAAAAVGDLIFIYGGLRGG-V-LLDDLLVAEDLAAA 442 (998)
Q Consensus 405 ~R~~hsa~~~~~~LyVfGG~~~~-~-~l~Dv~~ld~~~~~ 442 (998)
+|++|+.++.+.+++|+||.... . .+.|+|.|+.....
T Consensus 265 ~R~~h~~~~~~~~~~l~gG~~~~~~~~l~~~~~l~~~~~~ 304 (482)
T KOG0379|consen 265 PRSGHSLTVSGDHLLLFGGGTDPKQEPLGDLYGLDLETLV 304 (482)
T ss_pred CcceeeeEEECCEEEEEcCCcccccccccccccccccccc
Confidence 99999999999999999997764 3 79999999987433
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-28 Score=289.88 Aligned_cols=251 Identities=16% Similarity=0.250 Sum_probs=207.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
..+..|+..+.+|..+... | .+..|+++++++.|||+||........+++++||+.++ +|..++ ++|.+|.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~---~~~~~R~ 334 (534)
T PHA03098 264 YNYITNYSPLSEINTIIDI---H-YVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTK--SWNKVP---ELIYPRK 334 (534)
T ss_pred ceeeecchhhhhcccccCc---c-ccccceEEEECCEEEEECCCcCCCCeeccEEEEeCCCC--eeeECC---CCCcccc
Confidence 3456788888899988643 3 35567999999999999998766667789999999987 498887 8899999
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~d 309 (998)
+|+++++++ +||++||.++...++++++||+.++ +|+.+++++ .+|..+++ +..+++||++||.......+++
T Consensus 335 ~~~~~~~~~-~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~lp---~~r~~~~~-~~~~~~iYv~GG~~~~~~~~~~ 407 (534)
T PHA03098 335 NPGVTVFNN-RIYVIGGIYNSISLNTVESWKPGES--KWREEPPLI---FPRYNPCV-VNVNNLIYVIGGISKNDELLKT 407 (534)
T ss_pred cceEEEECC-EEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCcC---cCCccceE-EEECCEEEEECCcCCCCcccce
Confidence 999999987 8999999987778899999999999 999987764 44655554 5669999999998655556789
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCC
Q 001901 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGR 389 (998)
Q Consensus 310 v~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~ 389 (998)
++.|++.++ +|...+++ |.+|.+|+++.++++|||+||.+..... ...+.+++||+.+++|+.++.+
T Consensus 408 v~~yd~~t~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~-~~~~~v~~yd~~~~~W~~~~~~-------- 474 (534)
T PHA03098 408 VECFSLNTN---KWSKGSPL-PISHYGGCAIYHDGKIYVIGGISYIDNI-KVYNIVESYNPVTNKWTELSSL-------- 474 (534)
T ss_pred EEEEeCCCC---eeeecCCC-CccccCceEEEECCEEEEECCccCCCCC-cccceEEEecCCCCceeeCCCC--------
Confidence 999999877 66666654 7899999999999999999998654321 2256799999999999999876
Q ss_pred CccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCcccEEEecccccc
Q 001901 390 YSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 390 ~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~Dv~~ld~~~~~ 442 (998)
+.+|..|++++++++|||+||.++....++++++|...-.
T Consensus 475 -------------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 475 -------------NFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred -------------CcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 5589999999999999999999877778999999866543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=282.67 Aligned_cols=234 Identities=18% Similarity=0.282 Sum_probs=193.5
Q ss_pred CcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCC
Q 001901 92 RCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEP 171 (998)
Q Consensus 92 R~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~ 171 (998)
+..|+++++ +++||++||...... ..+++++||+.+++|..++.+
T Consensus 285 ~~~~~~~~~------------~~~lyv~GG~~~~~~--------------------~~~~v~~yd~~~~~W~~~~~~--- 329 (534)
T PHA03098 285 VYCFGSVVL------------NNVIYFIGGMNKNNL--------------------SVNSVVSYDTKTKSWNKVPEL--- 329 (534)
T ss_pred cccceEEEE------------CCEEEEECCCcCCCC--------------------eeccEEEEeCCCCeeeECCCC---
Confidence 445677777 789999999865432 567999999999999998876
Q ss_pred CCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCC-C
Q 001901 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG-K 250 (998)
Q Consensus 172 P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g-~ 250 (998)
|.+|.+|++++++++||++||.. .....+++++||+.+++ |+.++ ++|.+|++|+++.+++ +||++||... .
T Consensus 330 ~~~R~~~~~~~~~~~lyv~GG~~-~~~~~~~v~~yd~~~~~--W~~~~---~lp~~r~~~~~~~~~~-~iYv~GG~~~~~ 402 (534)
T PHA03098 330 IYPRKNPGVTVFNNRIYVIGGIY-NSISLNTVESWKPGESK--WREEP---PLIFPRYNPCVVNVNN-LIYVIGGISKND 402 (534)
T ss_pred CcccccceEEEECCEEEEEeCCC-CCEecceEEEEcCCCCc--eeeCC---CcCcCCccceEEEECC-EEEEECCcCCCC
Confidence 78999999999999999999986 34457899999999874 99887 8999999999999988 8999999743 4
Q ss_pred CCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC--CCcccEEEEecCCCCeEEEEECCC
Q 001901 251 RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS--VPLASAYGLAKHRDGRWEWAIAPG 328 (998)
Q Consensus 251 ~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~--~~~~dv~~~~~~~~~~W~w~~~~g 328 (998)
..++++++||+.++ +|+.+.++ |.+|..|+ ++..+++||++||.+... ..++.++.|++.++ +|..++.
T Consensus 403 ~~~~~v~~yd~~t~--~W~~~~~~---p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~W~~~~~ 473 (534)
T PHA03098 403 ELLKTVECFSLNTN--KWSKGSPL---PISHYGGC-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN---KWTELSS 473 (534)
T ss_pred cccceEEEEeCCCC--eeeecCCC---CccccCce-EEEECCEEEEECCccCCCCCcccceEEEecCCCC---ceeeCCC
Confidence 45799999999999 99998765 34455554 555699999999986443 23567999999887 6667765
Q ss_pred CCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 329 VSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 329 ~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
+ |.+|..++++.++++|||+||.+... ..+++++||+++++|+.++..
T Consensus 474 ~-~~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~ 521 (534)
T PHA03098 474 L-NFPRINASLCIFNNKIYVVGGDKYEY----YINEIEVYDDKTNTWTLFCKF 521 (534)
T ss_pred C-CcccccceEEEECCEEEEEcCCcCCc----ccceeEEEeCCCCEEEecCCC
Confidence 5 67899999999999999999987543 267899999999999998875
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=257.27 Aligned_cols=225 Identities=18% Similarity=0.205 Sum_probs=179.8
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcE
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW 162 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W 162 (998)
......|.||..|+++++ +++||++||..... .++++++||+.+++|
T Consensus 54 ~~~~~lp~~r~~~~~~~~------------~~~lyviGG~~~~~---------------------~~~~v~~~d~~~~~w 100 (323)
T TIGR03548 54 VKDGQLPYEAAYGASVSV------------ENGIYYIGGSNSSE---------------------RFSSVYRITLDESKE 100 (323)
T ss_pred EEcccCCccccceEEEEE------------CCEEEEEcCCCCCC---------------------CceeEEEEEEcCCce
Confidence 344578999988888887 78999999986433 678999999999998
Q ss_pred ----EEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC-CCCcccEEEEEC
Q 001901 163 ----SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG 237 (998)
Q Consensus 163 ----~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P-~~R~~hs~~~~~ 237 (998)
+.+++ .|.+|..|++++++++|||+||... +...+++++||+.++ +|+.++ ++| .+|..|++++++
T Consensus 101 ~~~~~~~~~---lp~~~~~~~~~~~~~~iYv~GG~~~-~~~~~~v~~yd~~~~--~W~~~~---~~p~~~r~~~~~~~~~ 171 (323)
T TIGR03548 101 ELICETIGN---LPFTFENGSACYKDGTLYVGGGNRN-GKPSNKSYLFNLETQ--EWFELP---DFPGEPRVQPVCVKLQ 171 (323)
T ss_pred eeeeeEcCC---CCcCccCceEEEECCEEEEEeCcCC-CccCceEEEEcCCCC--CeeECC---CCCCCCCCcceEEEEC
Confidence 44444 4899999999999999999999743 345789999999987 499987 666 479999998888
Q ss_pred CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCC--CCCCccceEEEEEeCCEEEEEeccCCCCC----------
Q 001901 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE--GPPPCMYATASARSDGLLLLCGGRDASSV---------- 305 (998)
Q Consensus 238 ~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~--~P~~r~~~~a~~~~~~~lyvfGG~~~~~~---------- 305 (998)
+ +||||||.++.. ..++++||+.++ +|+.+.++.. .|..+..++++++.+++|||+||.+....
T Consensus 172 ~-~iYv~GG~~~~~-~~~~~~yd~~~~--~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 247 (323)
T TIGR03548 172 N-ELYVFGGGSNIA-YTDGYKYSPKKN--QWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATM 247 (323)
T ss_pred C-EEEEEcCCCCcc-ccceEEEecCCC--eeEECCCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhc
Confidence 7 899999987643 468999999999 9999987643 23334456666677899999999864310
Q ss_pred ---------------------CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCC
Q 001901 306 ---------------------PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG 356 (998)
Q Consensus 306 ---------------------~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~ 356 (998)
..++++.||+.++ +|..++.++..+|..++++.++++|||+||....+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~pg 316 (323)
T TIGR03548 248 KDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTG---KWKSIGNSPFFARCGAALLLTGNNIFSINGELKPG 316 (323)
T ss_pred cchhhhhhHHHHhCCCccccCcCceEEEEECCCC---eeeEcccccccccCchheEEECCEEEEEeccccCC
Confidence 1257999999988 67776655446899999999999999999986544
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-25 Score=261.11 Aligned_cols=207 Identities=18% Similarity=0.276 Sum_probs=173.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||++||..... ..+.+++||+.+++|..++++ |.+|..|++++++++||++||
T Consensus 271 ~~~lyviGG~~~~~---------------------~~~~v~~Ydp~~~~W~~~~~m---~~~r~~~~~v~~~~~iYviGG 326 (480)
T PHA02790 271 GEVVYLIGGWMNNE---------------------IHNNAIAVNYISNNWIPIPPM---NSPRLYASGVPANNKLYVVGG 326 (480)
T ss_pred CCEEEEEcCCCCCC---------------------cCCeEEEEECCCCEEEECCCC---CchhhcceEEEECCEEEEECC
Confidence 78999999985432 667899999999999999987 889999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
... .+.+++||+.++ +|..++ ++|.+|.+|+++++++ +||++||.++. .+.+++||+.++ +|+.++
T Consensus 327 ~~~----~~sve~ydp~~n--~W~~~~---~l~~~r~~~~~~~~~g-~IYviGG~~~~--~~~ve~ydp~~~--~W~~~~ 392 (480)
T PHA02790 327 LPN----PTSVERWFHGDA--AWVNMP---SLLKPRCNPAVASINN-VIYVIGGHSET--DTTTEYLLPNHD--QWQFGP 392 (480)
T ss_pred cCC----CCceEEEECCCC--eEEECC---CCCCCCcccEEEEECC-EEEEecCcCCC--CccEEEEeCCCC--EEEeCC
Confidence 742 256899999887 499987 8999999999999988 89999998654 368999999999 999998
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEccc
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGA 352 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~ 352 (998)
++.. +|..+ ++++.+++||++||. +..|++.++ +|..++++ |.+|..+++++++++|||+||.
T Consensus 393 ~m~~---~r~~~-~~~~~~~~IYv~GG~---------~e~ydp~~~---~W~~~~~m-~~~r~~~~~~v~~~~IYviGG~ 455 (480)
T PHA02790 393 STYY---PHYKS-CALVFGRRLFLVGRN---------AEFYCESSN---TWTLIDDP-IYPRDNPELIIVDNKLLLIGGF 455 (480)
T ss_pred CCCC---ccccc-eEEEECCEEEEECCc---------eEEecCCCC---cEeEcCCC-CCCccccEEEEECCEEEEECCc
Confidence 7644 35554 555679999999983 456777776 66667665 6899999999999999999998
Q ss_pred CCCCCccccCCeEEEEECCCCeEEEc
Q 001901 353 LGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 353 ~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
++.. ..+.+++||+.+++|+..
T Consensus 456 ~~~~----~~~~ve~Yd~~~~~W~~~ 477 (480)
T PHA02790 456 YRGS----YIDTIEVYNNRTYSWNIW 477 (480)
T ss_pred CCCc----ccceEEEEECCCCeEEec
Confidence 7432 257899999999999764
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=239.71 Aligned_cols=248 Identities=23% Similarity=0.367 Sum_probs=201.4
Q ss_pred CCCCCccceEEEEeC--CEEEEEeCCCCCC---CCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEE
Q 001901 170 EPPTPRAAHVATAVG--TMVVIQGGIGPAG---LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (998)
Q Consensus 170 ~~P~pR~~hsa~~~~--~~lyVfGG~~~~~---~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~ 244 (998)
.+|+||.+.++++.- +.+++|||.-.++ ...+|+|.||+.++. |..+... ..|.||+.|.++++..+.||+|
T Consensus 62 ~~PspRsn~sl~~nPekeELilfGGEf~ngqkT~vYndLy~Yn~k~~e--Wkk~~sp-n~P~pRsshq~va~~s~~l~~f 138 (521)
T KOG1230|consen 62 PPPSPRSNPSLFANPEKEELILFGGEFYNGQKTHVYNDLYSYNTKKNE--WKKVVSP-NAPPPRSSHQAVAVPSNILWLF 138 (521)
T ss_pred CCCCCCCCcceeeccCcceeEEecceeecceeEEEeeeeeEEeccccc--eeEeccC-CCcCCCccceeEEeccCeEEEe
Confidence 479999999998873 4999999954333 346999999999985 9988733 5689999999999986699999
Q ss_pred cCCCC------CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC---CCCcccEEEEec
Q 001901 245 GGNDG------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS---SVPLASAYGLAK 315 (998)
Q Consensus 245 GG~~g------~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~---~~~~~dv~~~~~ 315 (998)
||... ..-+.|+|.||+.++ +|+++...+ .|.+|.+|-+++. ..+|+||||+... ...+||+|.|+.
T Consensus 139 GGEfaSPnq~qF~HYkD~W~fd~~tr--kweql~~~g-~PS~RSGHRMvaw-K~~lilFGGFhd~nr~y~YyNDvy~FdL 214 (521)
T KOG1230|consen 139 GGEFASPNQEQFHHYKDLWLFDLKTR--KWEQLEFGG-GPSPRSGHRMVAW-KRQLILFGGFHDSNRDYIYYNDVYAFDL 214 (521)
T ss_pred ccccCCcchhhhhhhhheeeeeeccc--hheeeccCC-CCCCCccceeEEe-eeeEEEEcceecCCCceEEeeeeEEEec
Confidence 99843 123789999999999 999998776 5888988887766 8899999997432 356899999988
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCC-----CccccCCeEEEEECCC-----CeEEEcccCcCC
Q 001901 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGG-----RMVEDSSSVAVLDTAA-----GVWCDTKSVVTS 384 (998)
Q Consensus 316 ~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~-----~~~~~~~dv~vyD~~t-----~~W~~v~~~~~~ 384 (998)
.+- +|...+.++.-|.||.+|...+. .+.|||+||++... ......+|+|.++++. .+|.++.+.+.+
T Consensus 215 dty-kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~k 293 (521)
T KOG1230|consen 215 DTY-KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVK 293 (521)
T ss_pred cce-eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCcceeEeeccCCCCC
Confidence 754 77777777777999999999888 99999999985321 0012378999999999 899999988665
Q ss_pred CCCCCCccccCCCCCccCCCCcceeEEEEECC-EEEEEcCCCC---------CCCcccEEEeccccccc
Q 001901 385 PRTGRYSADAAGGDAAVELTRRCRHAAAAVGD-LIFIYGGLRG---------GVLLDDLLVAEDLAAAE 443 (998)
Q Consensus 385 p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~-~LyVfGG~~~---------~~~l~Dv~~ld~~~~~~ 443 (998)
|.+|.++++++..+ +-+.|||..+ +.++||+|.+|+.....
T Consensus 294 ------------------PspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt~nrW 344 (521)
T KOG1230|consen 294 ------------------PSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLTRNRW 344 (521)
T ss_pred ------------------CCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheecccchh
Confidence 56999999999955 9999999654 47899999999765443
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=248.23 Aligned_cols=247 Identities=22% Similarity=0.301 Sum_probs=180.8
Q ss_pred CCC-CCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEe
Q 001901 87 DGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (998)
Q Consensus 87 ~~P-~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l 165 (998)
..| .+|.+|+++++ +++|||+||........ ....++++|+||+.+++|+++
T Consensus 69 ~~p~~~r~~~~~v~~------------~~~IYV~GG~~~~~~~~---------------~~~~~~~v~~YD~~~n~W~~~ 121 (376)
T PRK14131 69 AFPGGPREQAVAAFI------------DGKLYVFGGIGKTNSEG---------------SPQVFDDVYKYDPKTNSWQKL 121 (376)
T ss_pred cCCCCCcccceEEEE------------CCEEEEEcCCCCCCCCC---------------ceeEcccEEEEeCCCCEEEeC
Confidence 445 48999999988 78999999986411000 001578999999999999999
Q ss_pred cCCCCCCCCccceEEEE-eCCEEEEEeCCCCCC---------------------------------CCcccEEEEEcCCC
Q 001901 166 TPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAG---------------------------------LSAEDLHVLDLTQQ 211 (998)
Q Consensus 166 ~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~---------------------------------~~~~dv~~~Dl~t~ 211 (998)
+.. .|.+|.+|++++ .+++||++||..... ...+++++||+.++
T Consensus 122 ~~~--~p~~~~~~~~~~~~~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~ 199 (376)
T PRK14131 122 DTR--SPVGLAGHVAVSLHNGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN 199 (376)
T ss_pred CCC--CCCcccceEEEEeeCCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC
Confidence 853 377788898887 789999999975310 12478999999998
Q ss_pred CCceEEeeecCCCCC-CCcccEEEEECCcEEEEEcCCCCCC-CcccEEE--EECCCCCceEEEcccCCCCCC---C-ccc
Q 001901 212 RPRWHRVVVQGPGPG-PRYGHVMALVGQRYLMAIGGNDGKR-PLADVWA--LDTAAKPYEWRKLEPEGEGPP---P-CMY 283 (998)
Q Consensus 212 t~~W~~l~~~g~~P~-~R~~hs~~~~~~~~Lyv~GG~~g~~-~lndv~~--yD~~s~~~~W~~v~~~~~~P~---~-r~~ 283 (998)
. |+.+. ++|. +|.+|+++.+++ +|||+||..... ...++|. ||+.++ +|+.+.+++.++. + ++.
T Consensus 200 ~--W~~~~---~~p~~~~~~~a~v~~~~-~iYv~GG~~~~~~~~~~~~~~~~~~~~~--~W~~~~~~p~~~~~~~~~~~~ 271 (376)
T PRK14131 200 Q--WKNAG---ESPFLGTAGSAVVIKGN-KLWLINGEIKPGLRTDAVKQGKFTGNNL--KWQKLPDLPPAPGGSSQEGVA 271 (376)
T ss_pred e--eeECC---cCCCCCCCcceEEEECC-EEEEEeeeECCCcCChhheEEEecCCCc--ceeecCCCCCCCcCCcCCccc
Confidence 4 99876 7785 788899888887 899999975422 3455554 466777 9999987754321 1 123
Q ss_pred eEEEEEeCCEEEEEeccCCCCC----------------CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEE
Q 001901 284 ATASARSDGLLLLCGGRDASSV----------------PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347 (998)
Q Consensus 284 ~~a~~~~~~~lyvfGG~~~~~~----------------~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~ 347 (998)
++.+++.+++|||+||.+.... ....+..|++.++ +|..+..+ |.+|..++++.++++||
T Consensus 272 ~~~a~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~r~~~~av~~~~~iy 347 (376)
T PRK14131 272 GAFAGYSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNG---KWQKVGEL-PQGLAYGVSVSWNNGVL 347 (376)
T ss_pred eEeceeECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCC---cccccCcC-CCCccceEEEEeCCEEE
Confidence 3445667999999999753210 1123556777766 55566554 78999999999999999
Q ss_pred EEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 348 V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
|+||..... ...+++++|+++.+.|+.
T Consensus 348 v~GG~~~~~---~~~~~v~~~~~~~~~~~~ 374 (376)
T PRK14131 348 LIGGETAGG---KAVSDVTLLSWDGKKLTV 374 (376)
T ss_pred EEcCCCCCC---cEeeeEEEEEEcCCEEEE
Confidence 999986543 237899999999888864
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=244.32 Aligned_cols=255 Identities=25% Similarity=0.376 Sum_probs=203.2
Q ss_pred eeecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCC
Q 001901 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (998)
Q Consensus 80 ~~~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (998)
......|+.|.+-..|.++.. |.+||+|||...... +.||+|.+-...
T Consensus 70 f~PavrGDiPpgcAA~Gfvcd------------GtrilvFGGMvEYGk--------------------YsNdLYELQasR 117 (830)
T KOG4152|consen 70 FAPAVRGDIPPGCAAFGFVCD------------GTRILVFGGMVEYGK--------------------YSNDLYELQASR 117 (830)
T ss_pred ecchhcCCCCCchhhcceEec------------CceEEEEccEeeecc--------------------ccchHHHhhhhh
Confidence 344567899999999999887 899999999987654 889999988888
Q ss_pred CcEEEecC----CCCCCCCccceEEEEeCCEEEEEeCCCCC--------CCCcccEEEEEcCCC--CCceEEeeecCCCC
Q 001901 160 NKWSRITP----FGEPPTPRAAHVATAVGTMVVIQGGIGPA--------GLSAEDLHVLDLTQQ--RPRWHRVVVQGPGP 225 (998)
Q Consensus 160 ~~W~~l~~----~g~~P~pR~~hsa~~~~~~lyVfGG~~~~--------~~~~~dv~~~Dl~t~--t~~W~~l~~~g~~P 225 (998)
-.|+++.+ .|.+|-||.+|+..+++++.|+|||...+ ..+++|+|++++.-. ..-|..+.+.|.+|
T Consensus 118 WeWkrlkp~~p~nG~pPCPRlGHSFsl~gnKcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P 197 (830)
T KOG4152|consen 118 WEWKRLKPKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLP 197 (830)
T ss_pred hhHhhcCCCCCCCCCCCCCccCceeEEeccEeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCC
Confidence 88998865 46789999999999999999999996422 246899999999843 34599999999999
Q ss_pred CCCcccEEEEEC-----CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001901 226 GPRYGHVMALVG-----QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (998)
Q Consensus 226 ~~R~~hs~~~~~-----~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~ 300 (998)
.+|..|+++++- ..++|||||+.|. .+.|+|.+|+.+. +|.+....+..|.||.-|+++++ +++||||||.
T Consensus 198 ~pRESHTAViY~eKDs~~skmvvyGGM~G~-RLgDLW~Ldl~Tl--~W~kp~~~G~~PlPRSLHsa~~I-GnKMyvfGGW 273 (830)
T KOG4152|consen 198 PPRESHTAVIYTEKDSKKSKMVVYGGMSGC-RLGDLWTLDLDTL--TWNKPSLSGVAPLPRSLHSATTI-GNKMYVFGGW 273 (830)
T ss_pred CCcccceeEEEEeccCCcceEEEEcccccc-cccceeEEeccee--ecccccccCCCCCCcccccceee-cceeEEecce
Confidence 999999999982 2389999999885 4899999999988 99999999999999999998877 9999999996
Q ss_pred C-----C--------CCCCcccEEEEecCCCCeEEEEECC----CCCCCCcceeEEEEECCEEEEEcccCCCCCc---cc
Q 001901 301 D-----A--------SSVPLASAYGLAKHRDGRWEWAIAP----GVSPSPRYQHAAVFVNARLHVSGGALGGGRM---VE 360 (998)
Q Consensus 301 ~-----~--------~~~~~~dv~~~~~~~~~~W~w~~~~----g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~---~~ 360 (998)
- . ...+.+.+-+++..+. .|+-.... ...|.+|.+|+++.++.+||+.-|+++-... ..
T Consensus 274 VPl~~~~~~~~~hekEWkCTssl~clNldt~-~W~tl~~d~~ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQV 352 (830)
T KOG4152|consen 274 VPLVMDDVKVATHEKEWKCTSSLACLNLDTM-AWETLLMDTLEDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQV 352 (830)
T ss_pred eeeeccccccccccceeeeccceeeeeecch-heeeeeeccccccccccccccceeEEeccEEEEEeccchhhHhhcccc
Confidence 1 1 1123444444555544 55543332 2368999999999999999999998764321 13
Q ss_pred cCCeEEEEECC
Q 001901 361 DSSSVAVLDTA 371 (998)
Q Consensus 361 ~~~dv~vyD~~ 371 (998)
...|+|.+|++
T Consensus 353 CCkDlWyLdTe 363 (830)
T KOG4152|consen 353 CCKDLWYLDTE 363 (830)
T ss_pred chhhhhhhccc
Confidence 46788888764
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-24 Score=243.81 Aligned_cols=222 Identities=18% Similarity=0.263 Sum_probs=168.7
Q ss_pred CCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC-CCCcccEEEEECCcEEEEEcCCCC
Q 001901 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVGQRYLMAIGGNDG 249 (998)
Q Consensus 171 ~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P-~~R~~hs~~~~~~~~Lyv~GG~~g 249 (998)
+|.+|..+++++++++|||+||.. .+++|+||+...+.+|..++ ++| .+|..|+++++++ +|||+||...
T Consensus 4 lp~~~~~~~~~~~~~~vyv~GG~~-----~~~~~~~d~~~~~~~W~~l~---~~p~~~R~~~~~~~~~~-~iYv~GG~~~ 74 (346)
T TIGR03547 4 LPVGFKNGTGAIIGDKVYVGLGSA-----GTSWYKLDLKKPSKGWQKIA---DFPGGPRNQAVAAAIDG-KLYVFGGIGK 74 (346)
T ss_pred CCccccCceEEEECCEEEEEcccc-----CCeeEEEECCCCCCCceECC---CCCCCCcccceEEEECC-EEEEEeCCCC
Confidence 488999999999999999999973 26799999854334699998 888 5899999999988 8999999854
Q ss_pred C------CCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC-------------------
Q 001901 250 K------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS------------------- 304 (998)
Q Consensus 250 ~------~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~------------------- 304 (998)
. ..++++|+||+.++ +|+.+.. ..|..+..+.++++.+++||++||.+...
T Consensus 75 ~~~~~~~~~~~~v~~Yd~~~~--~W~~~~~--~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (346)
T TIGR03547 75 ANSEGSPQVFDDVYRYDPKKN--SWQKLDT--RSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAADKDSEPKD 150 (346)
T ss_pred CCCCCcceecccEEEEECCCC--EEecCCC--CCCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhcCccchhhh
Confidence 2 25789999999999 9999973 22444555555557899999999986421
Q ss_pred --------------CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEE-
Q 001901 305 --------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLD- 369 (998)
Q Consensus 305 --------------~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD- 369 (998)
..+++++.|++.++ +|..++.++..+|..|+++.++++|||+||...... ...+++.||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~YDp~t~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~y~~ 224 (346)
T TIGR03547 151 KLIAAYFSQPPEDYFWNKNVLSYDPSTN---QWRNLGENPFLGTAGSAIVHKGNKLLLINGEIKPGL---RTAEVKQYLF 224 (346)
T ss_pred hhHHHHhCCChhHcCccceEEEEECCCC---ceeECccCCCCcCCCceEEEECCEEEEEeeeeCCCc---cchheEEEEe
Confidence 01478999999988 677777664347899999999999999999864331 134566665
Q ss_pred -CCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCC
Q 001901 370 -TAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR 425 (998)
Q Consensus 370 -~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~ 425 (998)
+.+++|+.+..++.+ +. ..+..|.+|++++++++|||+||.+
T Consensus 225 ~~~~~~W~~~~~m~~~-r~-------------~~~~~~~~~~a~~~~~~Iyv~GG~~ 267 (346)
T TIGR03547 225 TGGKLEWNKLPPLPPP-KS-------------SSQEGLAGAFAGISNGVLLVAGGAN 267 (346)
T ss_pred cCCCceeeecCCCCCC-CC-------------CccccccEEeeeEECCEEEEeecCC
Confidence 577899999887321 10 0122456788889999999999975
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=249.85 Aligned_cols=205 Identities=19% Similarity=0.313 Sum_probs=171.7
Q ss_pred EEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEE
Q 001901 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (998)
Q Consensus 180 a~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~y 259 (998)
++.+++.||++||.+. ....+.+++||+.++ +|..++ ++|.+|..++++.+++ +||++||.++. +.+++|
T Consensus 267 ~~~~~~~lyviGG~~~-~~~~~~v~~Ydp~~~--~W~~~~---~m~~~r~~~~~v~~~~-~iYviGG~~~~---~sve~y 336 (480)
T PHA02790 267 STHVGEVVYLIGGWMN-NEIHNNAIAVNYISN--NWIPIP---PMNSPRLYASGVPANN-KLYVVGGLPNP---TSVERW 336 (480)
T ss_pred eEEECCEEEEEcCCCC-CCcCCeEEEEECCCC--EEEECC---CCCchhhcceEEEECC-EEEEECCcCCC---CceEEE
Confidence 3458999999999853 345678999999987 499998 8999999999999987 89999998642 679999
Q ss_pred ECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001901 260 DTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (998)
Q Consensus 260 D~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsa 339 (998)
|+.++ +|..+++++. +|. .+++++.+++||++||.++. .+.+..|++.++ +|...+++ |.+|..|++
T Consensus 337 dp~~n--~W~~~~~l~~---~r~-~~~~~~~~g~IYviGG~~~~---~~~ve~ydp~~~---~W~~~~~m-~~~r~~~~~ 403 (480)
T PHA02790 337 FHGDA--AWVNMPSLLK---PRC-NPAVASINNVIYVIGGHSET---DTTTEYLLPNHD---QWQFGPST-YYPHYKSCA 403 (480)
T ss_pred ECCCC--eEEECCCCCC---CCc-ccEEEEECCEEEEecCcCCC---CccEEEEeCCCC---EEEeCCCC-CCccccceE
Confidence 99999 9999987754 355 45566679999999998643 356788998877 66777765 689999999
Q ss_pred EEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEE
Q 001901 340 VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419 (998)
Q Consensus 340 v~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~Ly 419 (998)
++++++|||+||. +++||+++++|+.++++ +.+|..+++++++++||
T Consensus 404 ~~~~~~IYv~GG~------------~e~ydp~~~~W~~~~~m---------------------~~~r~~~~~~v~~~~IY 450 (480)
T PHA02790 404 LVFGRRLFLVGRN------------AEFYCESSNTWTLIDDP---------------------IYPRDNPELIIVDNKLL 450 (480)
T ss_pred EEECCEEEEECCc------------eEEecCCCCcEeEcCCC---------------------CCCccccEEEEECCEEE
Confidence 9999999999983 57899999999999887 66899999999999999
Q ss_pred EEcCCCCCCCcccEEEecccc
Q 001901 420 IYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 420 VfGG~~~~~~l~Dv~~ld~~~ 440 (998)
|+||+++...++.++++|...
T Consensus 451 viGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 451 LIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred EECCcCCCcccceEEEEECCC
Confidence 999988766678888888654
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=210.30 Aligned_cols=185 Identities=21% Similarity=0.359 Sum_probs=130.7
Q ss_pred EEEecCCCCHHHHHHHHHHcCCCCCCCCcc--ceeEEEeccccCCCCChHHHHHHHHHhhhc---CCCcEEEeecCcccc
Q 001901 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIA--YIDYLFLGDYVDRGQHSLETITLLLALKVE---YPNNVHLIRGNHEAA 775 (998)
Q Consensus 701 ~vvGDiHG~~~dL~~il~~~g~~~~~~~~~--~~~~vfLGDyVDRG~~s~evl~ll~~lk~~---~p~~v~llrGNHE~~ 775 (998)
+||||||||+..|.++|+.+++......+. ...+||||||||||+++.|||.+|+.|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 589999999999999999988643221111 227999999999999999999999999854 456899999999999
Q ss_pred chhhhcCChHH-HHHHhCCC--cchhhh---hhhhhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCC
Q 001901 776 DINALFGFRIE-CIERMGER--DGIWAW---HRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAG 849 (998)
Q Consensus 776 ~~~~~~gf~~e-~~~~~g~~--~~~~~~---~~~~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~ 849 (998)
.++..+.+... ....+... ....++ ..+.++++.||+...++ ++++||||+.|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 88754433211 11111100 001122 34478899999998886 68889999922
Q ss_pred CcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEecc
Q 001901 850 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSA 924 (998)
Q Consensus 850 ~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa 924 (998)
+|+...- .+.... .=+...++++|+.++.++||+||+.++.|...+++|++|+|.+.
T Consensus 140 -------~w~r~y~-------~~~~~~----~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 -------LWYRGYS-------KETSDK----ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred -------HHhhHhh-------hhhhhc----cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 3321110 000000 01236788999999999999999999888776899999999873
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=216.23 Aligned_cols=131 Identities=22% Similarity=0.364 Sum_probs=98.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCC---ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGD---IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~---~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
++++||||||||++.|.++|+++++....+. ....++||||||||||++|+|||.+|++|. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 3689999999999999999999987421100 001279999999999999999999999885 44689999999999
Q ss_pred cchhhhcCC-------hHHHHHHhCCC---cchhhhhhhhhhhcccceeEEEc-CeEEEecCCccCc
Q 001901 775 ADINALFGF-------RIECIERMGER---DGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRS 830 (998)
Q Consensus 775 ~~~~~~~gf-------~~e~~~~~g~~---~~~~~~~~~~~~f~~LP~aa~i~-~~il~vHgGi~~~ 830 (998)
+.++...+- ..+....|... ....+++.+.++|+.||++.+++ ++++|||||+.+.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 887655331 12222333221 12346678899999999998774 6899999999876
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=203.06 Aligned_cols=130 Identities=24% Similarity=0.415 Sum_probs=98.8
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCC----CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAG----DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~----~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 773 (998)
++|.||||||||+..|+++|+++++...+. .....++||||||||||++|.|||.+|+.|+.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 479999999999999999999998764320 000127999999999999999999999998754 47999999999
Q ss_pred ccchhhhcCCh-------HHHHHHhCCCcchhhhhhhhhhhcccceeEEEc-CeEEEecCCccCc
Q 001901 774 AADINALFGFR-------IECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRS 830 (998)
Q Consensus 774 ~~~~~~~~gf~-------~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~-~~il~vHgGi~~~ 830 (998)
.+.++...+.. .+....|... ...+.+.+.++|+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 98876543311 1222333221 2345678889999999998775 5799999998864
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.9e-20 Score=194.37 Aligned_cols=123 Identities=23% Similarity=0.294 Sum_probs=92.1
Q ss_pred EEEecCCCCHHHHHHHHHHcCCCCCCCC--ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchh
Q 001901 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGD--IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (998)
Q Consensus 701 ~vvGDiHG~~~dL~~il~~~g~~~~~~~--~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 778 (998)
+||||||||++.|.++|+++++....+. ....++||||||||||++|.|||.+|+.|+.. .++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 7999999999999999999987532100 00117999999999999999999999998644 4899999999998875
Q ss_pred hhcCC-h----------------HHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCcc
Q 001901 779 ALFGF-R----------------IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIG 828 (998)
Q Consensus 779 ~~~gf-~----------------~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~ 828 (998)
...+. . .+..+.++. ....++.+.++|+.||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43321 0 112222321 123567788999999999776 47999999985
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-20 Score=202.21 Aligned_cols=129 Identities=22% Similarity=0.372 Sum_probs=99.9
Q ss_pred eEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhh
Q 001901 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINA 779 (998)
Q Consensus 700 i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~ 779 (998)
++||||||||+..|+++|+++++.+..+ +++|||||||||++|+|||.+|+.|+ .++++|+||||.+.++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D-----~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~ 71 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKD-----RLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAV 71 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCC-----EEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHH
Confidence 5899999999999999999998764322 89999999999999999999999986 58999999999998887
Q ss_pred hcCChHH----HHHHhCCCcchhhhhhhhhhhcccceeEEEcC-eEEEecCCccCcccCHHhhhhcc
Q 001901 780 LFGFRIE----CIERMGERDGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQ 841 (998)
Q Consensus 780 ~~gf~~e----~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~-~il~vHgGi~~~~~~~~~i~~i~ 841 (998)
.+|+... ....+- .....+.+.+++..+|+...+++ ++++|||||+|.. ++++...+.
T Consensus 72 ~~g~~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~~a 134 (257)
T cd07422 72 AAGIKKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALKLA 134 (257)
T ss_pred hcCccccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHHHH
Confidence 6664311 111110 01123567888999999988864 8999999999974 455544433
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-19 Score=195.92 Aligned_cols=125 Identities=20% Similarity=0.357 Sum_probs=97.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchh
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 778 (998)
.++||||||||+..|.++|+++++.+..+ .++|||||||||++|+|||.+|+.+ +.++++|+||||.+.+.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D-----~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~ 72 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKD-----TLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLA 72 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCC-----EEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHH
Confidence 58999999999999999999998753321 7999999999999999999999987 35799999999999888
Q ss_pred hhcCChHH----HHHHhCCCcchhhhhhhhhhhcccceeEEE-cCeEEEecCCccCcccCHHh
Q 001901 779 ALFGFRIE----CIERMGERDGIWAWHRINRLFNWLPLAALI-EKKIICMHGGIGRSINHVEQ 836 (998)
Q Consensus 779 ~~~gf~~e----~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i-~~~il~vHgGi~~~~~~~~~ 836 (998)
..+|+... ....+- .....+.+.++++.||+...+ ++++++|||||+|.. ++++
T Consensus 73 ~~~g~~~~~~~~~l~~~l---~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~-~~~~ 131 (275)
T PRK00166 73 VAAGIKRNKKKDTLDPIL---EAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW-DLAT 131 (275)
T ss_pred hhcCCccccchhHHHHHH---ccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC-CHHH
Confidence 77765321 111110 012345677889999998776 568999999999874 4433
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-20 Score=197.52 Aligned_cols=127 Identities=24% Similarity=0.347 Sum_probs=100.8
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchh
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 778 (998)
.++||||||||++.|.++|+++++.+..+ +++|||||||||++|+|||.+|.+++ .++++|+||||.+.+.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D-----~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~ 72 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQD-----TLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLA 72 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCC-----EEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHH
Confidence 58999999999999999999998765332 79999999999999999999999874 4688999999999998
Q ss_pred hhcCCh-----HHHHHHhCCCcchhhhhhhhhhhcccceeEEEc-CeEEEecCCccCcccCHHhhhh
Q 001901 779 ALFGFR-----IECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSINHVEQIEN 839 (998)
Q Consensus 779 ~~~gf~-----~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~-~~il~vHgGi~~~~~~~~~i~~ 839 (998)
..+|+. +.....+. ....+.+.+++..+|+....+ .++++|||||+|.. ++++...
T Consensus 73 ~~~g~~~~~~~d~l~~~l~----a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~ 134 (279)
T TIGR00668 73 VFAGISRNKPKDRLDPLLE----APDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKE 134 (279)
T ss_pred HhcCCCccCchHHHHHHHH----ccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHH
Confidence 887763 12222121 124567788999999997654 47999999999984 4555443
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-19 Score=189.33 Aligned_cols=82 Identities=32% Similarity=0.479 Sum_probs=66.1
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC-cEEEeecCccccch
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN-NVHLIRGNHEAADI 777 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~~ 777 (998)
++++||||||+++.|.++|+.+.............+||||||||||++|.|||.+|++++..+|. .+++||||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 68999999999999999998764321100001126999999999999999999999999999986 68999999998866
Q ss_pred hhh
Q 001901 778 NAL 780 (998)
Q Consensus 778 ~~~ 780 (998)
..+
T Consensus 83 ~fL 85 (304)
T cd07421 83 AFL 85 (304)
T ss_pred hHh
Confidence 443
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.6e-19 Score=187.46 Aligned_cols=120 Identities=26% Similarity=0.336 Sum_probs=90.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
++++||||||||+..|+++|+.+++.+..+ +++|||||||||++|.|||.+|.. .++++||||||.+.+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D-----~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l 85 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRD-----LLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMAL 85 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccC-----EEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHH
Confidence 489999999999999999999998753221 799999999999999999999976 368899999999988
Q ss_pred hhhcCChHHHHHHhCCC-------cchhhhhhhhhhhcccceeEEE---cCeEEEecCCcc
Q 001901 778 NALFGFRIECIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIG 828 (998)
Q Consensus 778 ~~~~gf~~e~~~~~g~~-------~~~~~~~~~~~~f~~LP~aa~i---~~~il~vHgGi~ 828 (998)
+...+-....+...|.. .....+..+.++++.||+...+ ++++++||||++
T Consensus 86 ~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 86 DALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 76543211122222211 1122345566889999999765 357999999984
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-18 Score=183.60 Aligned_cols=147 Identities=26% Similarity=0.333 Sum_probs=105.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
++++|||||||++..|.++++..++....+ .++|+|||||||+++.||+.+|.. ..+++||||||.+.+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d-----~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~ 69 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARD-----RLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAI 69 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCC-----EEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHH
Confidence 478999999999999999999987643221 799999999999999999999876 368999999999988
Q ss_pred hhhcC--ChHHHHHHhCCCcc-----hhhhhhhhhhhcccceeEEEc---CeEEEecCCccCcccCHHhhhhccCCcccC
Q 001901 778 NALFG--FRIECIERMGERDG-----IWAWHRINRLFNWLPLAALIE---KKIICMHGGIGRSINHVEQIENLQRPITME 847 (998)
Q Consensus 778 ~~~~g--f~~e~~~~~g~~~~-----~~~~~~~~~~f~~LP~aa~i~---~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (998)
....+ +..+.+.+++.... ..+++.+.++|+.||+...++ .+++|||||+.+... .+.+.. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~--~~~~-- 144 (207)
T cd07424 70 DALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA--VTLR-- 144 (207)
T ss_pred hHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc--cccC--
Confidence 87655 33344444443311 113455788999999998774 479999999965421 111110 1111
Q ss_pred CCCcceeccccCCCC
Q 001901 848 AGSIVLMDLLWSDPT 862 (998)
Q Consensus 848 ~~~~~~~dlLWsDP~ 862 (998)
.....+++|+++.
T Consensus 145 --~~~~~~~~w~~~~ 157 (207)
T cd07424 145 --PEDIEELLWSRTR 157 (207)
T ss_pred --cccceeeeeccch
Confidence 1256678998764
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-18 Score=181.19 Aligned_cols=124 Identities=25% Similarity=0.370 Sum_probs=91.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
++++||||||++..|.++++.+... +.+ .+||||||||||++|.+|+.+|+.++. .+.++++|+||||.+.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d------~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~ 74 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEE------TIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEF 74 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCC------EEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHH
Confidence 6899999999999999999987532 122 799999999999999999999999754 3568999999999987
Q ss_pred hhhhcCC--------------hHHHHHHhCCCcc---------------------------hhhhhhhhhhhcccceeEE
Q 001901 777 INALFGF--------------RIECIERMGERDG---------------------------IWAWHRINRLFNWLPLAAL 815 (998)
Q Consensus 777 ~~~~~gf--------------~~e~~~~~g~~~~---------------------------~~~~~~~~~~f~~LP~aa~ 815 (998)
+....+. ..+....||-... ...+..+..+++.||+...
T Consensus 75 l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~ 154 (235)
T PHA02239 75 YNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK 154 (235)
T ss_pred HHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE
Confidence 6543211 1223344542210 0123455568888999977
Q ss_pred EcCeEEEecCCccCc
Q 001901 816 IEKKIICMHGGIGRS 830 (998)
Q Consensus 816 i~~~il~vHgGi~~~ 830 (998)
.+ +++|||||+.|.
T Consensus 155 ~~-~~ifVHAGi~p~ 168 (235)
T PHA02239 155 ED-KYIFSHSGGVSW 168 (235)
T ss_pred EC-CEEEEeCCCCCC
Confidence 65 799999999875
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-17 Score=176.54 Aligned_cols=120 Identities=23% Similarity=0.244 Sum_probs=86.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
++++||||||||+..|+++|+.+.+....+ .++|||||||||++|.|||.+|.+ .+++.||||||.+.+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d-----~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~ 83 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETD-----LLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMAL 83 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCC-----EEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHH
Confidence 489999999999999999999987543221 799999999999999999999865 368999999999888
Q ss_pred hhhcCChHHHHHHhCCCc-------chhhhhhhhhhhcccceeEEEc---CeEEEecCCcc
Q 001901 778 NALFGFRIECIERMGERD-------GIWAWHRINRLFNWLPLAALIE---KKIICMHGGIG 828 (998)
Q Consensus 778 ~~~~gf~~e~~~~~g~~~-------~~~~~~~~~~~f~~LP~aa~i~---~~il~vHgGi~ 828 (998)
.....-....+...|... .......+..+++.||+...+. .++++||||++
T Consensus 84 ~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 84 DAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 654321111111111110 0112233455789999997663 47999999984
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.7e-15 Score=159.87 Aligned_cols=282 Identities=18% Similarity=0.215 Sum_probs=209.1
Q ss_pred ccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCC--Cc
Q 001901 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT--NK 161 (998)
Q Consensus 84 ~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t--~~ 161 (998)
+..+.|.+--+-+-..+ ++.+||-=|.. -...|.+|+.. ..
T Consensus 29 ~lPdlPvg~KnG~Ga~i------------g~~~YVGLGs~-------------------------G~afy~ldL~~~~k~ 71 (381)
T COG3055 29 QLPDLPVGFKNGAGALI------------GDTVYVGLGSA-------------------------GTAFYVLDLKKPGKG 71 (381)
T ss_pred cCCCCCcccccccccee------------cceEEEEeccC-------------------------CccceehhhhcCCCC
Confidence 34456666655555555 77888877742 23667888875 57
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCC----CCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEEC
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG----LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~----~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~ 237 (998)
|++++.. +-.+|....+++++++||||||.+... ...+|+|+||+.+++ |+++.+. .|..-.+|+++.++
T Consensus 72 W~~~a~F--pG~~rnqa~~a~~~~kLyvFgG~Gk~~~~~~~~~nd~Y~y~p~~ns--W~kl~t~--sP~gl~G~~~~~~~ 145 (381)
T COG3055 72 WTKIADF--PGGARNQAVAAVIGGKLYVFGGYGKSVSSSPQVFNDAYRYDPSTNS--WHKLDTR--SPTGLVGASTFSLN 145 (381)
T ss_pred ceEcccC--CCcccccchheeeCCeEEEeeccccCCCCCceEeeeeEEecCCCCh--hheeccc--cccccccceeEecC
Confidence 9999987 467899999999999999999987443 347999999999986 9999854 36678899999999
Q ss_pred CcEEEEEcCCCC----------------------------------CCCcccEEEEECCCCCceEEEcccCCCCCCCccc
Q 001901 238 QRYLMAIGGNDG----------------------------------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (998)
Q Consensus 238 ~~~Lyv~GG~~g----------------------------------~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~ 283 (998)
+..+|++||.+. ......++.||+.++ +|+.+...+. -..+
T Consensus 146 ~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n--~W~~~G~~pf---~~~a 220 (381)
T COG3055 146 GTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN--QWRNLGENPF---YGNA 220 (381)
T ss_pred CceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--hhhhcCcCcc---cCcc
Confidence 889999999841 112457899999999 9998764433 3456
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc------ceeEEEEECCEEEEEcccCCCC-
Q 001901 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR------YQHAAVFVNARLHVSGGALGGG- 356 (998)
Q Consensus 284 ~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR------~~hsav~~~~~L~V~GG~~~~~- 356 (998)
.++++..++++.++-|.-........++.++...+ .-+|......++..- .++-.-..++.++|.||.+..+
T Consensus 221 Gsa~~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~-~~~w~~l~~lp~~~~~~~eGvAGaf~G~s~~~~lv~GGAnF~Ga 299 (381)
T COG3055 221 GSAVVIKGNKLTLINGEIKPGLRTAEVKQADFGGD-NLKWLKLSDLPAPIGSNKEGVAGAFSGKSNGEVLVAGGANFPGA 299 (381)
T ss_pred CcceeecCCeEEEEcceecCCccccceeEEEeccC-ceeeeeccCCCCCCCCCccccceeccceeCCeEEEecCCCChhH
Confidence 67788888999999998777777778888877644 446666665433322 2222334468899999963211
Q ss_pred --------------CccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEc
Q 001901 357 --------------RMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYG 422 (998)
Q Consensus 357 --------------~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfG 422 (998)
.......+||+|| .+.|+.+..+ |.++++..++..++.||++|
T Consensus 300 ~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d--~g~Wk~~GeL---------------------p~~l~YG~s~~~nn~vl~IG 356 (381)
T COG3055 300 LKAYKNGKFYAHEGLSKSWNSEVYIFD--NGSWKIVGEL---------------------PQGLAYGVSLSYNNKVLLIG 356 (381)
T ss_pred HHHHHhcccccccchhhhhhceEEEEc--CCceeeeccc---------------------CCCccceEEEecCCcEEEEc
Confidence 1123467899998 9999999888 66888889999999999999
Q ss_pred CC-CCCCCcccEEEec
Q 001901 423 GL-RGGVLLDDLLVAE 437 (998)
Q Consensus 423 G~-~~~~~l~Dv~~ld 437 (998)
|- +++..+..++.+-
T Consensus 357 GE~~~Gka~~~v~~l~ 372 (381)
T COG3055 357 GETSGGKATTRVYSLS 372 (381)
T ss_pred cccCCCeeeeeEEEEE
Confidence 94 4667788887764
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.1e-15 Score=165.33 Aligned_cols=313 Identities=17% Similarity=0.257 Sum_probs=207.4
Q ss_pred CCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEe
Q 001901 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (998)
Q Consensus 86 g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l 165 (998)
...|.-|.||.++.... .+.||++||.++.. .+.|+|.|+...+.|+.+
T Consensus 255 ~~~p~~RgGHQMV~~~~----------~~CiYLYGGWdG~~---------------------~l~DFW~Y~v~e~~W~~i 303 (723)
T KOG2437|consen 255 DNRPGMRGGHQMVIDVQ----------TECVYLYGGWDGTQ---------------------DLADFWAYSVKENQWTCI 303 (723)
T ss_pred ccCccccCcceEEEeCC----------CcEEEEecCcccch---------------------hHHHHHhhcCCcceeEEe
Confidence 36899999999999853 47999999998876 788999999999999999
Q ss_pred cCCCCCCCCccceEEEEeCC--EEEEEeCCCCCC-----CCcccEEEEEcCCCCCceEEeeec---CCCCCCCcccEEEE
Q 001901 166 TPFGEPPTPRAAHVATAVGT--MVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMAL 235 (998)
Q Consensus 166 ~~~g~~P~pR~~hsa~~~~~--~lyVfGG~~~~~-----~~~~dv~~~Dl~t~t~~W~~l~~~---g~~P~~R~~hs~~~ 235 (998)
...+..|..|..|-++.... ++|+.|-+-+.+ ..-.|+|+||..+++ |..+.-. ..-|..-+.|.+++
T Consensus 304 N~~t~~PG~RsCHRMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~~--W~~ls~dt~~dGGP~~vfDHqM~V 381 (723)
T KOG2437|consen 304 NRDTEGPGARSCHRMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTNT--WMLLSEDTAADGGPKLVFDHQMCV 381 (723)
T ss_pred ecCCCCCcchhhhhhhhhhhHhHHhhhhhccccccccccccccceEEEecCCce--eEEecccccccCCcceeecceeeE
Confidence 98888899999999999876 999999754322 235899999999986 9987632 23588899999999
Q ss_pred ECCc-EEEEEcCCCC--C-CCcccEEEEECCCCCceEEEcccCCCC-------CCCccceEEEE-EeCCEEEEEeccCCC
Q 001901 236 VGQR-YLMAIGGNDG--K-RPLADVWALDTAAKPYEWRKLEPEGEG-------PPPCMYATASA-RSDGLLLLCGGRDAS 303 (998)
Q Consensus 236 ~~~~-~Lyv~GG~~g--~-~~lndv~~yD~~s~~~~W~~v~~~~~~-------P~~r~~~~a~~-~~~~~lyvfGG~~~~ 303 (998)
.+++ .+|||||..- + -.+.-++.||+... .|..+...... -..|..|.+-. ..+.++|+|||...+
T Consensus 382 d~~k~~iyVfGGr~~~~~e~~f~GLYaf~~~~~--~w~~l~e~~~~~~~vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~ 459 (723)
T KOG2437|consen 382 DSEKHMIYVFGGRILTCNEPQFSGLYAFNCQCQ--TWKLLREDSCNAGPVVEDIQSRIGHCMEFHSKNRCLYVFGGQRSK 459 (723)
T ss_pred ecCcceEEEecCeeccCCCccccceEEEecCCc--cHHHHHHHHhhcCcchhHHHHHHHHHHHhcCCCCeEEeccCcccc
Confidence 9873 3999999843 2 34788999999998 88776432110 01133443332 346789999997655
Q ss_pred CCCcccEEEEecCCCCeEE----EEECCCCCCCCcceeEEEEE---CCEEEEEcccCCCCCc--cccCCeEEEEECCCCe
Q 001901 304 SVPLASAYGLAKHRDGRWE----WAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRM--VEDSSSVAVLDTAAGV 374 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~----w~~~~g~~P~pR~~hsav~~---~~~L~V~GG~~~~~~~--~~~~~dv~vyD~~t~~ 374 (998)
. .++-.+.|+....+.=. ....+.+.|.+-...- +.. ...|++.-|....... ....+++|+|+..+..
T Consensus 460 ~-El~L~f~y~I~~E~~~~~s~~~k~dsS~~pS~~f~qR-s~~dp~~~~i~~~~G~~~~~~~~e~~~rns~wi~~i~~~~ 537 (723)
T KOG2437|consen 460 T-ELNLFFSYDIDSEHVDIISDGTKKDSSMVPSTGFTQR-ATIDPELNEIHVLSGLSKDKEKREENVRNSFWIYDIVRNS 537 (723)
T ss_pred e-EEeehhcceeccccchhhhccCcCccccCCCcchhhh-cccCCCCcchhhhcccchhccCccccccCcEEEEEecccc
Confidence 4 34444444332110000 0001122222211111 222 3467777776432211 1236889999999999
Q ss_pred EEEcccCcCCC-------CCCCCccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCC-----CCcccEEEeccc
Q 001901 375 WCDTKSVVTSP-------RTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGG-----VLLDDLLVAEDL 439 (998)
Q Consensus 375 W~~v~~~~~~p-------~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyVfGG~~~~-----~~l~Dv~~ld~~ 439 (998)
|..+....... +..++ .--.....+.+|++|+.++. -.-+|.+||+.+. ..++|.|.++..
T Consensus 538 w~cI~~I~~~~~d~dtvfsvpFp----~ks~~~~~~~~rf~h~~~~dL~~~~~yl~Ggn~~~~~~~~m~l~dfW~l~I~ 612 (723)
T KOG2437|consen 538 WSCIYKIDQAAKDNDTVFSVPFP----TKSLQEEEPCPRFAHQLVYDLLHKVHYLFGGNPGKSCSPKMRLDDFWSLKIC 612 (723)
T ss_pred hhhHhhhHHhhccCCceeeccCC----cccccceeccccchhHHHHHHhhhhhhhhcCCCCCCCCchhhhhhHHHHhhc
Confidence 98876552110 00001 01112345789999987655 5568999997653 567888888754
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-11 Score=133.86 Aligned_cols=236 Identities=21% Similarity=0.317 Sum_probs=165.6
Q ss_pred CCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecC
Q 001901 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (998)
Q Consensus 88 ~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~ 167 (998)
+-.+|-+.+++++ +++||||||....... .....+|+|+||+.+++|.++..
T Consensus 79 pG~~rnqa~~a~~------------~~kLyvFgG~Gk~~~~----------------~~~~~nd~Y~y~p~~nsW~kl~t 130 (381)
T COG3055 79 PGGARNQAVAAVI------------GGKLYVFGGYGKSVSS----------------SPQVFNDAYRYDPSTNSWHKLDT 130 (381)
T ss_pred CCcccccchheee------------CCeEEEeeccccCCCC----------------CceEeeeeEEecCCCChhheecc
Confidence 4467888888888 7999999998765531 11289999999999999999998
Q ss_pred CCCCCCCccceEEEEeCC-EEEEEeCCCCC---------------------------------CCCcccEEEEEcCCCCC
Q 001901 168 FGEPPTPRAAHVATAVGT-MVVIQGGIGPA---------------------------------GLSAEDLHVLDLTQQRP 213 (998)
Q Consensus 168 ~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~---------------------------------~~~~~dv~~~Dl~t~t~ 213 (998)
. .|....+|+++.+++ ++|++||.+.. .....+++.|++.++
T Consensus 131 ~--sP~gl~G~~~~~~~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n-- 206 (381)
T COG3055 131 R--SPTGLVGASTFSLNGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN-- 206 (381)
T ss_pred c--cccccccceeEecCCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--
Confidence 7 477788999999988 99999996411 112577888999887
Q ss_pred ceEEeeecCCCC-CCCcccEEEEECCcEEEEEcCCCC-CCCcccEEEEECCCCCceEEEcccCCCCCCCcc---ceEEEE
Q 001901 214 RWHRVVVQGPGP-GPRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM---YATASA 288 (998)
Q Consensus 214 ~W~~l~~~g~~P-~~R~~hs~~~~~~~~Lyv~GG~~g-~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~---~~~a~~ 288 (998)
+|..+- ..| .++++++. +..++++.++-|.-- .-+...+++++...+..+|..+.+.+.+..... ..+...
T Consensus 207 ~W~~~G---~~pf~~~aGsa~-~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~~~~w~~l~~lp~~~~~~~eGvAGaf~G 282 (381)
T COG3055 207 QWRNLG---ENPFYGNAGSAV-VIKGNKLTLINGEIKPGLRTAEVKQADFGGDNLKWLKLSDLPAPIGSNKEGVAGAFSG 282 (381)
T ss_pred hhhhcC---cCcccCccCcce-eecCCeEEEEcceecCCccccceeEEEeccCceeeeeccCCCCCCCCCccccceeccc
Confidence 488774 444 57777555 444447888877632 234567888888877779999977654332221 122223
Q ss_pred EeCCEEEEEeccCC---------------CC---CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEc
Q 001901 289 RSDGLLLLCGGRDA---------------SS---VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350 (998)
Q Consensus 289 ~~~~~lyvfGG~~~---------------~~---~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~G 350 (998)
..++.+++.||..- .+ .-..++|.|+ ++.|+ .+ +..|.++....++..++.||++|
T Consensus 283 ~s~~~~lv~GGAnF~Ga~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d---~g~Wk--~~-GeLp~~l~YG~s~~~nn~vl~IG 356 (381)
T COG3055 283 KSNGEVLVAGGANFPGALKAYKNGKFYAHEGLSKSWNSEVYIFD---NGSWK--IV-GELPQGLAYGVSLSYNNKVLLIG 356 (381)
T ss_pred eeCCeEEEecCCCChhHHHHHHhcccccccchhhhhhceEEEEc---CCcee--ee-cccCCCccceEEEecCCcEEEEc
Confidence 55788889888421 11 1235677776 44555 33 34477888888899999999999
Q ss_pred ccCCCCCccccCCeEEEE
Q 001901 351 GALGGGRMVEDSSSVAVL 368 (998)
Q Consensus 351 G~~~~~~~~~~~~dv~vy 368 (998)
|.+..+.. ...++.+
T Consensus 357 GE~~~Gka---~~~v~~l 371 (381)
T COG3055 357 GETSGGKA---TTRVYSL 371 (381)
T ss_pred cccCCCee---eeeEEEE
Confidence 99877653 3445544
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.1e-12 Score=138.26 Aligned_cols=210 Identities=21% Similarity=0.362 Sum_probs=154.7
Q ss_pred CCceEEeeecC-------CCCCCCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccc
Q 001901 212 RPRWHRVVVQG-------PGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (998)
Q Consensus 212 t~~W~~l~~~g-------~~P~~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~ 283 (998)
+.+|+++.... ..|..|.+|-++.-. ++.+|++||.+|-..+.|+|.|+...+ .|+.+...+..|..|.+
T Consensus 238 ~~~W~~i~~~~~~~~~~~~~p~~RgGHQMV~~~~~~CiYLYGGWdG~~~l~DFW~Y~v~e~--~W~~iN~~t~~PG~RsC 315 (723)
T KOG2437|consen 238 KPRWSQIIPKSTKGDGEDNRPGMRGGHQMVIDVQTECVYLYGGWDGTQDLADFWAYSVKEN--QWTCINRDTEGPGARSC 315 (723)
T ss_pred cccccccCchhhcccccccCccccCcceEEEeCCCcEEEEecCcccchhHHHHHhhcCCcc--eeEEeecCCCCCcchhh
Confidence 35799887654 578899999998764 359999999999999999999999999 99999988888999999
Q ss_pred eEEEEE-eCCEEEEEeccCCCC-----CCcccEEEEecCCCCeEEEEECCCC---CCCCcceeEEEEECCE--EEEEccc
Q 001901 284 ATASAR-SDGLLLLCGGRDASS-----VPLASAYGLAKHRDGRWEWAIAPGV---SPSPRYQHAAVFVNAR--LHVSGGA 352 (998)
Q Consensus 284 ~~a~~~-~~~~lyvfGG~~~~~-----~~~~dv~~~~~~~~~~W~w~~~~g~---~P~pR~~hsav~~~~~--L~V~GG~ 352 (998)
|-++.- ...+||+.|-+-+.. ..-+|.|.||..++ .|........ -|..-+.|.+++.+.+ +||+||.
T Consensus 316 HRMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~-~W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGGr 394 (723)
T KOG2437|consen 316 HRMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTN-TWMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGGR 394 (723)
T ss_pred hhhhhhhhHhHHhhhhhccccccccccccccceEEEecCCc-eeEEecccccccCCcceeecceeeEecCcceEEEecCe
Confidence 987763 456999998753221 23578999999877 6655444321 2677899999999887 9999998
Q ss_pred CCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCCCCc
Q 001901 353 LGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLL 430 (998)
Q Consensus 353 ~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyVfGG~~~~~~l 430 (998)
.-... .....-+|.||.....|..+...... +.+ .-+....|.+|++-.+ ++.+|+|||.+....+
T Consensus 395 ~~~~~-e~~f~GLYaf~~~~~~w~~l~e~~~~----------~~~-vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~~El 462 (723)
T KOG2437|consen 395 ILTCN-EPQFSGLYAFNCQCQTWKLLREDSCN----------AGP-VVEDIQSRIGHCMEFHSKNRCLYVFGGQRSKTEL 462 (723)
T ss_pred eccCC-CccccceEEEecCCccHHHHHHHHhh----------cCc-chhHHHHHHHHHHHhcCCCCeEEeccCcccceEE
Confidence 54322 12367799999999999877654110 011 1223457888887666 5589999997765444
Q ss_pred ccEEEe
Q 001901 431 DDLLVA 436 (998)
Q Consensus 431 ~Dv~~l 436 (998)
+=.+.+
T Consensus 463 ~L~f~y 468 (723)
T KOG2437|consen 463 NLFFSY 468 (723)
T ss_pred eehhcc
Confidence 433333
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.8e-09 Score=105.72 Aligned_cols=78 Identities=29% Similarity=0.372 Sum_probs=57.1
Q ss_pred CeEEEecCCCCHHHH---HHH-HHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHH--HHhhhcCCCcEEEeecCc
Q 001901 699 PIKIFGDLHGQFGDL---MRL-FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLL--LALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL---~~i-l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll--~~lk~~~p~~v~llrGNH 772 (998)
+|+++||+|+.+... .+. .........+ -+|++||++|+|..+.+..... +..+...+..+++++|||
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPD------FIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTS------EEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCC------EEEeeccccccccccccchhhhccchhhhhcccccccccccc
Confidence 689999999999987 333 3322222222 6899999999999988877765 555666778999999999
Q ss_pred cccchhhhcC
Q 001901 773 EAADINALFG 782 (998)
Q Consensus 773 E~~~~~~~~g 782 (998)
|.......+.
T Consensus 76 D~~~~~~~~~ 85 (200)
T PF00149_consen 76 DYYSGNSFYG 85 (200)
T ss_dssp SSHHHHHHHH
T ss_pred ccceeccccc
Confidence 9987655443
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.3e-09 Score=102.47 Aligned_cols=147 Identities=35% Similarity=0.484 Sum_probs=118.6
Q ss_pred chhhhcCChHHHHHHhCCCcchhhhhh---hhhhhcccceeEEEcC-eEEEecCCccCcc-cCHHhhhhccCCc--ccCC
Q 001901 776 DINALFGFRIECIERMGERDGIWAWHR---INRLFNWLPLAALIEK-KIICMHGGIGRSI-NHVEQIENLQRPI--TMEA 848 (998)
Q Consensus 776 ~~~~~~gf~~e~~~~~g~~~~~~~~~~---~~~~f~~LP~aa~i~~-~il~vHgGi~~~~-~~~~~i~~i~rp~--~~~~ 848 (998)
.++..+|+.++|...++.. ..|.. +.++|+.||+.+++++ .++|.|+++++.+ ..+++++.+.|.. .+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 78 (155)
T COG0639 2 LLTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPH 78 (155)
T ss_pred hhhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCC
Confidence 4566788998988877653 34655 9999999999999988 9999999999976 6778888877765 3333
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEecccccc
Q 001901 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYC 928 (998)
Q Consensus 849 ~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~ 928 (998)
.+ ...+.+|+++... ....|.+..||.+. .| ++....|+..+..+.|.|+|+.+..++...+.+..+|+|++++||
T Consensus 79 ~g-~~~~~~~~~~~~~-~~~~w~~~~~g~~~-~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 79 AG-HTHDLLWSDPDGG-DRRIWNPGPRGVPR-DG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cc-ccccccCCCCCCC-cccccccCCCCCCc-cc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 33 5666699998752 25779999999983 34 788889998898888999999999999988776899999999997
Q ss_pred C
Q 001901 929 G 929 (998)
Q Consensus 929 ~ 929 (998)
.
T Consensus 155 ~ 155 (155)
T COG0639 155 Y 155 (155)
T ss_pred C
Confidence 3
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.4e-08 Score=110.00 Aligned_cols=93 Identities=17% Similarity=0.312 Sum_probs=79.0
Q ss_pred ccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEE
Q 001901 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (998)
Q Consensus 84 ~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~ 163 (998)
+.|-.+.|+..||++.+ ++++|||||.+.... ..+++|+||..+.+|.
T Consensus 17 ~~~~~~~~~~~~tav~i------------gdk~yv~GG~~d~~~--------------------~~~~v~i~D~~t~~W~ 64 (398)
T PLN02772 17 TNGFGVKPKNRETSVTI------------GDKTYVIGGNHEGNT--------------------LSIGVQILDKITNNWV 64 (398)
T ss_pred ccCccCCCCCcceeEEE------------CCEEEEEcccCCCcc--------------------ccceEEEEECCCCcEe
Confidence 34456779999999999 899999999876432 6789999999999999
Q ss_pred EecCCCCCCCCccceEEEEeCC-EEEEEeCCCCCCCCcccEEEEEcCCC
Q 001901 164 RITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (998)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~ 211 (998)
.....|.+|.||.+|+++++++ +|+|+++... ..+++|.+.+.+.
T Consensus 65 ~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~---~~~~~w~l~~~t~ 110 (398)
T PLN02772 65 SPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSA---PDDSIWFLEVDTP 110 (398)
T ss_pred cccccCCCCCCCCcceEEEECCceEEEEeCCCC---CccceEEEEcCCH
Confidence 9999999999999999999965 9999987543 3488999998873
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.8e-08 Score=80.03 Aligned_cols=50 Identities=42% Similarity=0.823 Sum_probs=44.3
Q ss_pred CCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCC
Q 001901 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGE 170 (998)
Q Consensus 91 pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~ 170 (998)
||++|+++++ +++||||||...... .++++++||+.+++|++++++
T Consensus 1 pR~~~s~v~~------------~~~iyv~GG~~~~~~--------------------~~~~v~~yd~~t~~W~~~~~m-- 46 (50)
T PF13964_consen 1 PRYGHSAVVV------------GGKIYVFGGYDNSGK--------------------YSNDVERYDPETNTWEQLPPM-- 46 (50)
T ss_pred CCccCEEEEE------------CCEEEEECCCCCCCC--------------------ccccEEEEcCCCCcEEECCCC--
Confidence 7999999999 799999999987421 789999999999999999887
Q ss_pred CCCCc
Q 001901 171 PPTPR 175 (998)
Q Consensus 171 ~P~pR 175 (998)
|.||
T Consensus 47 -p~pR 50 (50)
T PF13964_consen 47 -PTPR 50 (50)
T ss_pred -CCCC
Confidence 7776
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.1e-08 Score=109.58 Aligned_cols=89 Identities=18% Similarity=0.412 Sum_probs=78.8
Q ss_pred CCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCC
Q 001901 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251 (998)
Q Consensus 172 P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~ 251 (998)
+.|+.+|+++++++++|||||.++.+...+++|+||..+.+ |..+.+.|..|.+|.+|+++++++.+|+|+++..+..
T Consensus 22 ~~~~~~~tav~igdk~yv~GG~~d~~~~~~~v~i~D~~t~~--W~~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~~ 99 (398)
T PLN02772 22 VKPKNRETSVTIGDKTYVIGGNHEGNTLSIGVQILDKITNN--WVSPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAPD 99 (398)
T ss_pred CCCCCcceeEEECCEEEEEcccCCCccccceEEEEECCCCc--EecccccCCCCCCCCcceEEEECCceEEEEeCCCCCc
Confidence 56899999999999999999988766577999999999975 9999999999999999999999888999998765543
Q ss_pred CcccEEEEECCCC
Q 001901 252 PLADVWALDTAAK 264 (998)
Q Consensus 252 ~lndv~~yD~~s~ 264 (998)
.++|.+.+.+.
T Consensus 100 --~~~w~l~~~t~ 110 (398)
T PLN02772 100 --DSIWFLEVDTP 110 (398)
T ss_pred --cceEEEEcCCH
Confidence 78999888764
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.71 E-value=3e-08 Score=79.81 Aligned_cols=50 Identities=32% Similarity=0.615 Sum_probs=45.7
Q ss_pred CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 174 PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 174 pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
||.+|++++++++|||+||........+++++||+.+++ |+.++ +||.+|
T Consensus 1 pR~~~s~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~---~mp~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVVGGKIYVFGGYDNSGKYSNDVERYDPETNT--WEQLP---PMPTPR 50 (50)
T ss_pred CCccCEEEEECCEEEEECCCCCCCCccccEEEEcCCCCc--EEECC---CCCCCC
Confidence 699999999999999999997767788999999999985 99998 899887
|
|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.5e-08 Score=77.96 Aligned_cols=49 Identities=43% Similarity=0.814 Sum_probs=41.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV 183 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~ 183 (998)
|++||||||....... .++|+|+||+.+++|+++ ++.|.||.+|+++++
T Consensus 1 g~~~~vfGG~~~~~~~-------------------~~nd~~~~~~~~~~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGT-------------------RLNDVWVFDLDTNTWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCC-------------------EecCEEEEECCCCEEEEC---CCCCCCccceEEEEC
Confidence 4789999999842211 889999999999999999 446999999999874
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=97.96 Aligned_cols=68 Identities=19% Similarity=0.342 Sum_probs=53.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC--------hHHHHHHHHHhhhcCCCcEEEee
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH--------SLETITLLLALKVEYPNNVHLIR 769 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~--------s~evl~ll~~lk~~~p~~v~llr 769 (998)
+++.|++|+||++..|.++++.+.....+ .++++||++|+|+. ..+++.+|..+ ...+++++
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d------~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~ 70 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGAD------WLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVR 70 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCC------EEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEc
Confidence 36899999999999999998877433333 79999999999873 45677666554 24699999
Q ss_pred cCcccc
Q 001901 770 GNHEAA 775 (998)
Q Consensus 770 GNHE~~ 775 (998)
||||..
T Consensus 71 GNhD~~ 76 (182)
T PRK09453 71 GNCDSE 76 (182)
T ss_pred cCCcch
Confidence 999974
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-06 Score=87.86 Aligned_cols=61 Identities=30% Similarity=0.486 Sum_probs=44.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
++|.++||+|++...+.++++.+.- .+ .++++||++|+ .+++.++..+ .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~~--~d------~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYINE--PD------FVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHTT--ES------EEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHhcC--CC------EEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 3689999999999999999999821 22 68899999993 7777777555 6999999999644
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.3e-07 Score=92.23 Aligned_cols=59 Identities=24% Similarity=0.400 Sum_probs=47.8
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
++.+++|+||++..+.++++.+.. .+ .++++||+++++.... ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d------~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD------LIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC------EEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 478999999999999999998754 22 7999999999998754 222 24699999999974
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-07 Score=75.42 Aligned_cols=47 Identities=28% Similarity=0.678 Sum_probs=30.8
Q ss_pred CCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCC
Q 001901 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168 (998)
Q Consensus 91 pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~ 168 (998)
||++|+++.+. +++||||||...... .++|+|+||+.+++|++++++
T Consensus 1 pR~~h~~~~~~-----------~~~i~v~GG~~~~~~--------------------~~~d~~~~d~~~~~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIG-----------DNSIYVFGGRDSSGS--------------------PLNDLWIFDIETNTWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE------------TTEEEEE--EEE-TE--------------------E---EEEEETTTTEEEE--SS
T ss_pred CcceEEEEEEe-----------CCeEEEECCCCCCCc--------------------ccCCEEEEECCCCEEEECCCC
Confidence 79999999984 479999999987542 899999999999999999554
|
|
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.4e-07 Score=72.72 Aligned_cols=47 Identities=34% Similarity=0.620 Sum_probs=40.1
Q ss_pred CcceeEEEEECCEEEEEccc-CCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 333 PRYQHAAVFVNARLHVSGGA-LGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 333 pR~~hsav~~~~~L~V~GG~-~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
||++|++++++++|||+||+ .... ....+++++||+++.+|+.+..+
T Consensus 1 ~r~~hs~~~~~~kiyv~GG~~~~~~--~~~~~~v~~~d~~t~~W~~~~~~ 48 (49)
T PF07646_consen 1 PRYGHSAVVLDGKIYVFGGYGTDNG--GSSSNDVWVFDTETNQWTELSPM 48 (49)
T ss_pred CccceEEEEECCEEEEECCcccCCC--CcccceeEEEECCCCEEeecCCC
Confidence 68999999999999999999 2221 24589999999999999998876
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-06 Score=84.62 Aligned_cols=62 Identities=19% Similarity=0.253 Sum_probs=46.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCC-CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~-~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
+++.|++|+||++..+..+++..... ..+ .++++||++ +.+++.+|..+. ..++.++||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVD------LVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCC------EEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 36899999999998777666655433 223 789999999 467777776542 359999999998
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.7e-07 Score=73.13 Aligned_cols=48 Identities=33% Similarity=0.704 Sum_probs=41.9
Q ss_pred CCEEEEEeCCC-CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE
Q 001901 184 GTMVVIQGGIG-PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (998)
Q Consensus 184 ~~~lyVfGG~~-~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~ 236 (998)
+++||||||.+ .....++|+|+||+.+. +|+++ +++|.+|++|+++++
T Consensus 1 g~~~~vfGG~~~~~~~~~nd~~~~~~~~~--~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGTRLNDVWVFDLDTN--TWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCCEecCEEEEECCCC--EEEEC---CCCCCCccceEEEEC
Confidence 57999999998 46778899999999987 59988 589999999999864
|
|
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.2e-07 Score=74.34 Aligned_cols=46 Identities=35% Similarity=0.850 Sum_probs=30.6
Q ss_pred CCcccEEEEECCcEEEEEcCCCCC-CCcccEEEEECCCCCceEEEcccC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEPE 274 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~-~~lndv~~yD~~s~~~~W~~v~~~ 274 (998)
||++|+++.++++.||||||.+.. ..++|+|+||+.++ +|+++.++
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~--~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIETN--TWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTTT--EEEE--SS
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCCC--EEEECCCC
Confidence 699999999975699999999886 68999999999999 99999443
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.7e-06 Score=85.06 Aligned_cols=118 Identities=22% Similarity=0.265 Sum_probs=77.5
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
++.+++|+||++. .+ .....+ .+|++||++++|...- +++.++..++ .| .+++++||||...
T Consensus 1 ~i~~isD~H~~~~----~~---~~~~~D------~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~ 64 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SIPDGD------VLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTL 64 (135)
T ss_pred CEEEEeCCCCCCC----cC---cCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcC
Confidence 4789999999987 11 111222 6888999999986532 2444444432 22 3678999999631
Q ss_pred hhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceecc
Q 001901 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDL 856 (998)
Q Consensus 777 ~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dl 856 (998)
. .-+.+++++||.+.... +.
T Consensus 65 ~-------------------------------------~~~~~ilv~H~~p~~~~-----------------------~~ 84 (135)
T cd07379 65 D-------------------------------------PEDTDILVTHGPPYGHL-----------------------DL 84 (135)
T ss_pred C-------------------------------------CCCCEEEEECCCCCcCc-----------------------cc
Confidence 1 11347899999642210 00
Q ss_pred ccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceE
Q 001901 857 LWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (998)
Q Consensus 857 LWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (998)
++ + . ..+|.+.+.+++++.+.+++|-||.-.+.|++
T Consensus 85 ~~--~----------------~-~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 85 VS--S----------------G-QRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred cc--c----------------C-cccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 00 0 0 23677889999999999999999999888887
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.2e-06 Score=70.11 Aligned_cols=46 Identities=37% Similarity=0.862 Sum_probs=41.0
Q ss_pred CCcccEEEEECCcEEEEEcCC---CCCCCcccEEEEECCCCCceEEEcccCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGN---DGKRPLADVWALDTAAKPYEWRKLEPEG 275 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~---~g~~~lndv~~yD~~s~~~~W~~v~~~~ 275 (998)
+|++|+++++++ +||||||. +.....+++++||+.+. +|+.+.+++
T Consensus 1 ~r~~hs~~~~~~-kiyv~GG~~~~~~~~~~~~v~~~d~~t~--~W~~~~~~g 49 (49)
T PF07646_consen 1 PRYGHSAVVLDG-KIYVFGGYGTDNGGSSSNDVWVFDTETN--QWTELSPMG 49 (49)
T ss_pred CccceEEEEECC-EEEEECCcccCCCCcccceeEEEECCCC--EEeecCCCC
Confidence 699999999998 89999999 55667999999999999 999998753
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=2e-06 Score=91.78 Aligned_cols=113 Identities=23% Similarity=0.239 Sum_probs=72.9
Q ss_pred CeEEEecCCCCHHHHH-HHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 699 PIKIFGDLHGQFGDLM-RLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~-~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
+|.++|||||++.... +.++..+ + + .+||+||+++. +.+++..|..+ +..+++++||||....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~--p-D------~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ--P-D------LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC--C-C------EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 5899999999987642 3343332 1 2 69999999864 56777776654 2358999999997543
Q ss_pred hhh---cC-----------------------------------------C-hHHHHHHhCCCcchhhhhhhhhhhcccce
Q 001901 778 NAL---FG-----------------------------------------F-RIECIERMGERDGIWAWHRINRLFNWLPL 812 (998)
Q Consensus 778 ~~~---~g-----------------------------------------f-~~e~~~~~g~~~~~~~~~~~~~~f~~LP~ 812 (998)
... +. + ..++..+|+- ...++.+..+++.++.
T Consensus 66 ~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi---~s~~eA~~~ive~~~~ 142 (238)
T cd07397 66 ATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGV---ISLEESAQRIIAAAKK 142 (238)
T ss_pred ccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCC---CCHHHHHHHHHHHhhh
Confidence 200 00 0 1245555652 2455677777888864
Q ss_pred eEEEcCeEEEecCCccCc
Q 001901 813 AALIEKKIICMHGGIGRS 830 (998)
Q Consensus 813 aa~i~~~il~vHgGi~~~ 830 (998)
+......||+.|+++.-.
T Consensus 143 ~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 143 APPDLPLILLAHNGPSGL 160 (238)
T ss_pred cCCCCCeEEEeCcCCcCC
Confidence 434445799999998643
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.2e-06 Score=88.43 Aligned_cols=71 Identities=11% Similarity=0.178 Sum_probs=55.5
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.+|.+++||||++..|.++++.+.....+ .+|++||++++|...-++..++-.|... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D------~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGAD------AIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 46999999999999999999876322223 6999999999997666676666666432 34699999999975
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-06 Score=67.47 Aligned_cols=40 Identities=40% Similarity=0.578 Sum_probs=36.2
Q ss_pred CCCCccceEEEEeCCEEEEEeCCC-CCCCCcccEEEEEcCC
Q 001901 171 PPTPRAAHVATAVGTMVVIQGGIG-PAGLSAEDLHVLDLTQ 210 (998)
Q Consensus 171 ~P~pR~~hsa~~~~~~lyVfGG~~-~~~~~~~dv~~~Dl~t 210 (998)
+|.||.+|++++++++||||||.. ......+|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGNNIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECCEEEEEcCccCCCCCEECcEEEEECCC
Confidence 489999999999999999999998 3677889999999876
|
|
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-06 Score=69.58 Aligned_cols=44 Identities=25% Similarity=0.532 Sum_probs=40.2
Q ss_pred CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee
Q 001901 174 PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (998)
Q Consensus 174 pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~ 219 (998)
||.+|++++++++|||+||.......++++++||+.++ +|..++
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~ 44 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGNNQPTNSVEVYDPETN--TWEELP 44 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBESTSSBEEEEEEEETTTT--EEEEEE
T ss_pred CCccCEEEEECCEEEEEeeecccCceeeeEEEEeCCCC--EEEEcC
Confidence 69999999999999999999887788999999999998 599997
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.1e-06 Score=69.56 Aligned_cols=45 Identities=38% Similarity=0.753 Sum_probs=41.0
Q ss_pred CCcccEEEEECCcEEEEEcCCCC-CCCcccEEEEECCCCCceEEEcccC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKLEPE 274 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g-~~~lndv~~yD~~s~~~~W~~v~~~ 274 (998)
||++|+++++++ +|||+||.++ ...++++++||+.++ +|+.++++
T Consensus 1 pR~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~m 46 (47)
T PF01344_consen 1 PRSGHAAVVVGN-KIYVIGGYDGNNQPTNSVEVYDPETN--TWEELPPM 46 (47)
T ss_dssp -BBSEEEEEETT-EEEEEEEBESTSSBEEEEEEEETTTT--EEEEEEEE
T ss_pred CCccCEEEEECC-EEEEEeeecccCceeeeEEEEeCCCC--EEEEcCCC
Confidence 689999999998 8999999988 778999999999999 99998765
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-06 Score=66.51 Aligned_cols=39 Identities=36% Similarity=0.701 Sum_probs=35.4
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCC--CCCcccEEEEECCC
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDTAA 263 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g--~~~lndv~~yD~~s 263 (998)
+|.+|++|+++++++ +||||||.++ ...++|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~-~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGN-NIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECC-EEEEEcCccCCCCCEECcEEEEECCC
Confidence 488999999999997 8999999994 77799999999976
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.5e-05 Score=76.32 Aligned_cols=117 Identities=23% Similarity=0.365 Sum_probs=82.0
Q ss_pred EEEecCCCCHHHHHHHH--HHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchh
Q 001901 701 KIFGDLHGQFGDLMRLF--DEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (998)
Q Consensus 701 ~vvGDiHG~~~dL~~il--~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 778 (998)
+++||+|+......... ........+ .+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~------~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPD------FVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCC------EEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 47999999998888764 221111112 68999999999998877766544444455678999999999
Q ss_pred hhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceecccc
Q 001901 779 ALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLW 858 (998)
Q Consensus 779 ~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLW 858 (998)
|+++|..+.+..... ..
T Consensus 70 -----------------------------------------i~~~H~~~~~~~~~~--------------~~-------- 86 (131)
T cd00838 70 -----------------------------------------ILLTHGPPYDPLDEL--------------SP-------- 86 (131)
T ss_pred -----------------------------------------EEEeccCCCCCchhh--------------cc--------
Confidence 889999886541100 00
Q ss_pred CCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceE
Q 001901 859 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (998)
Q Consensus 859 sDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (998)
. .......+...+...+..++|-||.-....+.
T Consensus 87 --------~------------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 87 --------D------------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------c------------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0 00155678888999999999999997765554
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00087 Score=71.47 Aligned_cols=147 Identities=18% Similarity=0.210 Sum_probs=93.8
Q ss_pred ccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc--
Q 001901 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK-- 161 (998)
Q Consensus 84 ~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~-- 161 (998)
...-.|+-|+-+.+..-....+. -...++.||.+.+.. +.+.+|++...+..
T Consensus 15 dSCYLPPLR~PAv~~~~~~~~~~------~~~YlIHGGrTPNNE--------------------lS~~LY~ls~~s~~cN 68 (337)
T PF03089_consen 15 DSCYLPPLRCPAVCHLSDPSDGE------PEQYLIHGGRTPNNE--------------------LSSSLYILSVDSRGCN 68 (337)
T ss_pred CcccCCCCCCccEeeecCCCCCC------eeeEEecCCcCCCcc--------------------cccceEEEEeecCCCC
Confidence 34456777777666663332221 346777888887664 77888988776543
Q ss_pred ------EEEecCCCCCCCCccceEEEEe---C-CEEEEEeCCCC--CC-----------CCcccEEEEEcCCCCCceEEe
Q 001901 162 ------WSRITPFGEPPTPRAAHVATAV---G-TMVVIQGGIGP--AG-----------LSAEDLHVLDLTQQRPRWHRV 218 (998)
Q Consensus 162 ------W~~l~~~g~~P~pR~~hsa~~~---~-~~lyVfGG~~~--~~-----------~~~~dv~~~Dl~t~t~~W~~l 218 (998)
...-.-.|+.|.+|++|++.++ | ..+++|||..- .+ .+.-.|+++|+.-.-..=..+
T Consensus 69 kK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRTTenWNsVvDC~P~VfLiDleFGC~tah~l 148 (337)
T PF03089_consen 69 KKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRTTENWNSVVDCPPQVFLIDLEFGCCTAHTL 148 (337)
T ss_pred ceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccchhhcceeccCCCeEEEEeccccccccccc
Confidence 3344556899999999999888 3 38899999641 11 123567788877431011223
Q ss_pred eecCCCCCCCcccEEEEECCcEEEEEcCCCC--CCCcccEEEEE
Q 001901 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALD 260 (998)
Q Consensus 219 ~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g--~~~lndv~~yD 260 (998)
+ .+.-+...|.+..-++ .+|++||..- +..-..++++.
T Consensus 149 p---El~dG~SFHvslar~D-~VYilGGHsl~sd~Rpp~l~rlk 188 (337)
T PF03089_consen 149 P---ELQDGQSFHVSLARND-CVYILGGHSLESDSRPPRLYRLK 188 (337)
T ss_pred h---hhcCCeEEEEEEecCc-eEEEEccEEccCCCCCCcEEEEE
Confidence 2 5556777888877777 8999999742 23334555543
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00025 Score=76.17 Aligned_cols=154 Identities=14% Similarity=0.231 Sum_probs=99.1
Q ss_pred EEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC--CCceEEEcccCCCCCCC
Q 001901 203 LHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA--KPYEWRKLEPEGEGPPP 280 (998)
Q Consensus 203 v~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s--~~~~W~~v~~~~~~P~~ 280 (998)
-.+||+.+++ ++.+.+ +..-+..+.+.+.++.+++.||.... ...+-.|++.. ..-.|...... .-.+
T Consensus 48 s~~yD~~tn~--~rpl~v----~td~FCSgg~~L~dG~ll~tGG~~~G--~~~ir~~~p~~~~~~~~w~e~~~~--m~~~ 117 (243)
T PF07250_consen 48 SVEYDPNTNT--FRPLTV----QTDTFCSGGAFLPDGRLLQTGGDNDG--NKAIRIFTPCTSDGTCDWTESPND--MQSG 117 (243)
T ss_pred EEEEecCCCc--EEeccC----CCCCcccCcCCCCCCCEEEeCCCCcc--ccceEEEecCCCCCCCCceECccc--ccCC
Confidence 3478998874 776642 33344444456667789999998542 34677788765 11278877542 1234
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC---CCeEEEEECC---CCCCCCcceeEEEEECCEEEEEcccCC
Q 001901 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR---DGRWEWAIAP---GVSPSPRYQHAAVFVNARLHVSGGALG 354 (998)
Q Consensus 281 r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~---~~~W~w~~~~---g~~P~pR~~hsav~~~~~L~V~GG~~~ 354 (998)
|-+.++....+|+++|+||.. +..+.|.+.. ...+.|.... ...+...|-+..+.-+|+||+++..
T Consensus 118 RWYpT~~~L~DG~vlIvGG~~------~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~-- 189 (243)
T PF07250_consen 118 RWYPTATTLPDGRVLIVGGSN------NPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR-- 189 (243)
T ss_pred CccccceECCCCCEEEEeCcC------CCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC--
Confidence 888899999999999999986 3345554542 2223332221 1123445556666668999999863
Q ss_pred CCCccccCCeEEEEECCCCeE-EEcccCcC
Q 001901 355 GGRMVEDSSSVAVLDTAAGVW-CDTKSVVT 383 (998)
Q Consensus 355 ~~~~~~~~~dv~vyD~~t~~W-~~v~~~~~ 383 (998)
+-.+||..++++ +.++.++.
T Consensus 190 ---------~s~i~d~~~n~v~~~lP~lPg 210 (243)
T PF07250_consen 190 ---------GSIIYDYKTNTVVRTLPDLPG 210 (243)
T ss_pred ---------CcEEEeCCCCeEEeeCCCCCC
Confidence 356789999987 77887744
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.1e-05 Score=63.35 Aligned_cols=47 Identities=30% Similarity=0.599 Sum_probs=40.0
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC
Q 001901 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT 185 (998)
Q Consensus 115 ~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~ 185 (998)
+||++||..... .++++++||+.+++|+.++++ |.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~~---------------------~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ---------------------RLKSVEVYDPETNKWTPLPSM---PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc---------------------eeeeEEEECCCCCeEccCCCC---CCccccceEEEeCC
Confidence 489999986422 678999999999999999876 89999999988764
|
|
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0041 Score=66.47 Aligned_cols=110 Identities=19% Similarity=0.257 Sum_probs=72.7
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCC------CceEEeeecCCCCCCCcccEEEEEC---CcEEEEEcCCCC-------
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQR------PRWHRVVVQGPGPGPRYGHVMALVG---QRYLMAIGGNDG------- 249 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t------~~W~~l~~~g~~P~~R~~hs~~~~~---~~~Lyv~GG~~g------- 249 (998)
.-+|-||.+++....+.+|++.+.+.. ....+-...|+.|.+||+|++-++. ....++|||+.-
T Consensus 40 ~YlIHGGrTPNNElS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRT 119 (337)
T PF03089_consen 40 QYLIHGGRTPNNELSSSLYILSVDSRGCNKKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRT 119 (337)
T ss_pred eEEecCCcCCCcccccceEEEEeecCCCCceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccc
Confidence 567779999998888999999887632 1223333468999999999998773 336888999831
Q ss_pred -------CCCcccEEEEECCCCCceEEE--cccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001901 250 -------KRPLADVWALDTAAKPYEWRK--LEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (998)
Q Consensus 250 -------~~~lndv~~yD~~s~~~~W~~--v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~ 301 (998)
-.+.-.|+.+|++-. .++. ++.... ....+.+...++.+|+.||+.
T Consensus 120 TenWNsVvDC~P~VfLiDleFG--C~tah~lpEl~d----G~SFHvslar~D~VYilGGHs 174 (337)
T PF03089_consen 120 TENWNSVVDCPPQVFLIDLEFG--CCTAHTLPELQD----GQSFHVSLARNDCVYILGGHS 174 (337)
T ss_pred hhhcceeccCCCeEEEEecccc--ccccccchhhcC----CeEEEEEEecCceEEEEccEE
Confidence 112345777777654 3322 122211 233444556699999999974
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0011 Score=71.20 Aligned_cols=149 Identities=14% Similarity=0.171 Sum_probs=93.9
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCC--CCCceEEeeecCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ--QRPRWHRVVVQGPGP 225 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t--~t~~W~~l~~~g~~P 225 (998)
...-..||+.+++++.+... .--.+.+.+.+ ++++++.||.... ...+..|+... .+..|.+.. ..|-
T Consensus 45 ~a~s~~yD~~tn~~rpl~v~----td~FCSgg~~L~dG~ll~tGG~~~G---~~~ir~~~p~~~~~~~~w~e~~--~~m~ 115 (243)
T PF07250_consen 45 PAHSVEYDPNTNTFRPLTVQ----TDTFCSGGAFLPDGRLLQTGGDNDG---NKAIRIFTPCTSDGTCDWTESP--NDMQ 115 (243)
T ss_pred eEEEEEEecCCCcEEeccCC----CCCcccCcCCCCCCCEEEeCCCCcc---ccceEEEecCCCCCCCCceECc--cccc
Confidence 55667899999999988754 22222222333 5599999998552 24577788765 112588775 2489
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC---CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA---KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s---~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.+|+..+++.+.++.++|+||.... ..+.+.... ....|..+......-+.-.+-...+..+|+||+|+..
T Consensus 116 ~~RWYpT~~~L~DG~vlIvGG~~~~----t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~-- 189 (243)
T PF07250_consen 116 SGRWYPTATTLPDGRVLIVGGSNNP----TYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR-- 189 (243)
T ss_pred CCCccccceECCCCCEEEEeCcCCC----cccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC--
Confidence 9999999999999999999998732 223333211 1134444432221112234556667779999999874
Q ss_pred CCCCcccEEEEecCCC
Q 001901 303 SSVPLASAYGLAKHRD 318 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~ 318 (998)
+.+.||...+
T Consensus 190 ------~s~i~d~~~n 199 (243)
T PF07250_consen 190 ------GSIIYDYKTN 199 (243)
T ss_pred ------CcEEEeCCCC
Confidence 3445566655
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00039 Score=71.84 Aligned_cols=58 Identities=24% Similarity=0.427 Sum_probs=42.2
Q ss_pred CeEEEecCC-CCHH-----HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCc
Q 001901 699 PIKIFGDLH-GQFG-----DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 699 ~i~vvGDiH-G~~~-----dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 772 (998)
.|.||+|+| |.-. .+.++|+.. ..+ .++.+||+++ .+++.+|..++ ..++.++|||
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~---~~d------~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~ 62 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPG---KIQ------HVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDF 62 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccC---CCC------EEEECCCCCC-----HHHHHHHHhhC----CceEEEECCC
Confidence 378999999 6543 356666541 122 6899999987 77887776652 2599999999
Q ss_pred cc
Q 001901 773 EA 774 (998)
Q Consensus 773 E~ 774 (998)
|.
T Consensus 63 D~ 64 (178)
T cd07394 63 DE 64 (178)
T ss_pred Cc
Confidence 97
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00027 Score=73.09 Aligned_cols=65 Identities=25% Similarity=0.323 Sum_probs=44.2
Q ss_pred eEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh-HHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-LETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 700 i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
|.+++||||++..|.+ ........+ -+|+.||++++|... .+.+..|.. .+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD------AVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC------EEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 222111112 688999999999763 333333332 2456999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=2.2e-05 Score=61.51 Aligned_cols=47 Identities=32% Similarity=0.490 Sum_probs=39.1
Q ss_pred EEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECC
Q 001901 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGD 416 (998)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~ 416 (998)
+|||+||.... ...+++++||+.+++|+.++.+ +.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGG----QRLKSVEVYDPETNKWTPLPSM---------------------PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCC----ceeeeEEEECCCCCeEccCCCC---------------------CCccccceEEEeCC
Confidence 48999998653 2378899999999999998877 67999999988764
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=7.7e-06 Score=93.08 Aligned_cols=238 Identities=13% Similarity=0.023 Sum_probs=164.2
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCeeeecC----CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCC
Q 001901 670 FLDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ 745 (998)
Q Consensus 670 ~~~~~~i~~l~~~~~~~~~~ep~~l~~~~----~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~ 745 (998)
.|...++..+++.+.+++..+|+...+.+ -.+.++|.||.+.|+.+.++.- |.-. .-|++-|++|+++.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~-----K~Y~rrg~a~m~l~ 86 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYI-----KAYVRRGTAVMALG 86 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhh-----heeeeccHHHHhHH
Confidence 46778899999999999999998887642 4788999999999999988764 2211 15999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecC
Q 001901 746 HSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825 (998)
Q Consensus 746 ~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHg 825 (998)
...+.+..|...+...|+...+.|++||+..+-..++|..+....+++. +..++..+...+-. |++..+.+.++=-|
T Consensus 87 ~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~- 163 (476)
T KOG0376|consen 87 EFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH- 163 (476)
T ss_pred HHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-
Confidence 9999999999999999999999999999999999999998888777654 23333333333322 14445554333333
Q ss_pred CccCcccCHHhhhh-----------------------------ccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCC
Q 001901 826 GIGRSINHVEQIEN-----------------------------LQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARG 876 (998)
Q Consensus 826 Gi~~~~~~~~~i~~-----------------------------i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg 876 (998)
-+ +++.+.. +.-++++ ..-.|.+|+++... -.-+-...++
T Consensus 164 kv-----t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~----~~~~d~~~sv~gd~--hGqfydl~ni 232 (476)
T KOG0376|consen 164 KV-----TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI----SVPGDVKISVCGDT--HGQFYDLLNI 232 (476)
T ss_pred hh-----hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe----ecCCCceEEecCCc--cccccchhhh
Confidence 11 1111111 1112221 14467789888752 2233344555
Q ss_pred CCceeeCHHHHHHHHHHcCCcEEEEcccccc-----------c-ceEEec---CCeEEEEeccccccC
Q 001901 877 PGLVTFGPDRVMEFCNNNDLQLIVRAHECVM-----------D-GFERFA---QGHLITLFSATNYCG 929 (998)
Q Consensus 877 ~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~-----------~-G~~~~~---~~~~iTvfSa~~y~~ 929 (998)
.+ ...+++....||.+.++.-+++.|.-+. + +|...+ .+.+++||+++.+|-
T Consensus 233 f~-l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 233 FE-LNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred Hh-hcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 55 3467778888999999999998886542 1 121111 235899999998874
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0005 Score=67.12 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=40.0
Q ss_pred EEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcc
Q 001901 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (998)
Q Consensus 701 ~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 773 (998)
.|++|.||....+.+++... ...+ .++++||+. .+++.++..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~~~d------~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--EGVD------LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhhC--CCCC------EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 38999999988887777652 2222 799999984 34566665542 225899999999
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.013 Score=63.04 Aligned_cols=206 Identities=8% Similarity=0.069 Sum_probs=113.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccce-EEEEe----CC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAH-VATAV----GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~h-sa~~~----~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
..++++||.|++|..++....+......+ ....+ +. +|+.+...... .....+++|++.++. |+.+...
T Consensus 14 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~-~~~~~~~Vys~~~~~--Wr~~~~~-- 88 (230)
T TIGR01640 14 KRLVVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGN-RNQSEHQVYTLGSNS--WRTIECS-- 88 (230)
T ss_pred CcEEEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCC-CCCccEEEEEeCCCC--ccccccC--
Confidence 46899999999999997531100001111 11112 12 77777543211 123578899999874 9988622
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.+........+.+++ .||-+.-.........+..||+.+. +|.. +... ...............+|+|.++.....
T Consensus 89 ~~~~~~~~~~v~~~G-~lyw~~~~~~~~~~~~IvsFDl~~E--~f~~~i~~P-~~~~~~~~~~~L~~~~G~L~~v~~~~~ 164 (230)
T TIGR01640 89 PPHHPLKSRGVCING-VLYYLAYTLKTNPDYFIVSFDVSSE--RFKEFIPLP-CGNSDSVDYLSLINYKGKLAVLKQKKD 164 (230)
T ss_pred CCCccccCCeEEECC-EEEEEEEECCCCCcEEEEEEEcccc--eEeeeeecC-ccccccccceEEEEECCEEEEEEecCC
Confidence 122122222556666 6877764332121226999999999 8885 4321 111101123344556788888765422
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcc----eeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCC
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY----QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~----~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~ 373 (998)
. ..-++|.+.......|+..-.-+.++.+.. ....+..+++|++.... .. ..-+.+||+.++
T Consensus 165 ~--~~~~IWvl~d~~~~~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~~-~~------~~~~~~y~~~~~ 230 (230)
T TIGR01640 165 T--NNFDLWVLNDAGKQEWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCED-EN------PFYIFYYNVGEN 230 (230)
T ss_pred C--CcEEEEEECCCCCCceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeCC-CC------ceEEEEEeccCC
Confidence 1 236899987665567875433333222222 13445567888877542 10 123888998764
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00035 Score=75.81 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=46.8
Q ss_pred CCeEEEecCCCCH------HHHHHHHHHcCCCCCCCCccceeEEEeccccCC--C-----CChHHHHHHHHHhhhcCCCc
Q 001901 698 APIKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR--G-----QHSLETITLLLALKVEYPNN 764 (998)
Q Consensus 698 ~~i~vvGDiHG~~------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDR--G-----~~s~evl~ll~~lk~~~p~~ 764 (998)
+++++++|+|... ..|.++|+.... ..+ .++++||++|. | +...+++.+|..|+.. +-.
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~-~~d------~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~ 72 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEAR-QAD------ALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVP 72 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhc-cCC------EEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCe
Confidence 3689999999542 235555543211 112 68999999985 2 2346777777777643 246
Q ss_pred EEEeecCcccc
Q 001901 765 VHLIRGNHEAA 775 (998)
Q Consensus 765 v~llrGNHE~~ 775 (998)
|++++||||..
T Consensus 73 v~~v~GNHD~~ 83 (241)
T PRK05340 73 CYFMHGNRDFL 83 (241)
T ss_pred EEEEeCCCchh
Confidence 99999999973
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00013 Score=74.27 Aligned_cols=67 Identities=27% Similarity=0.236 Sum_probs=45.3
Q ss_pred eEEEecCCCCHHHHHHHHHH-cCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 700 IKIFGDLHGQFGDLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 700 i~vvGDiHG~~~dL~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
+.+++|||+....+...+.. ......+ -++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d------~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDAD------ILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCC------EEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 46899999998777665431 1111112 6889999999987765544 2222 23345799999999985
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.01 Score=63.15 Aligned_cols=69 Identities=16% Similarity=0.244 Sum_probs=40.2
Q ss_pred eCHHHHHHHHHHc-CCcEEEEcccccccceEEe-----cCCeEEEEeccccccC--CCCCe-EEEEEEcCC-ceEEeEEe
Q 001901 882 FGPDRVMEFCNNN-DLQLIVRAHECVMDGFERF-----AQGHLITLFSATNYCG--TANNA-GAILVLGRD-LVVVPKLI 951 (998)
Q Consensus 882 fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~-----~~~~~iTvfSa~~y~~--~~~n~-ga~l~~~~~-~~~~~~~~ 951 (998)
.+...+.+.++++ ++++++-||.=. .+.... .++.+..+++ +|-. ..+|. =.++.++.+ ..|..+.+
T Consensus 135 ~~~~~~~~ll~~~~~V~~v~~GH~H~-~~~~~~~~~~~~g~~v~~~~~--~~q~~~~~g~~~~r~~~f~~~~~~i~~~ty 211 (214)
T cd07399 135 DGQQIWDKLVKKNDNVFMVLSGHVHG-AGRTTLVSVGDAGRTVHQMLA--DYQGEPNGGNGFLRLLEFDPDNNKIDVRTY 211 (214)
T ss_pred cHHHHHHHHHhCCCCEEEEEccccCC-CceEEEcccCCCCCEeeEEee--cccCCCCCCcceEEEEEEecCCCEEEEEeC
Confidence 4566788889988 899999999632 333332 1334555543 3421 11221 134555555 57777777
Q ss_pred cc
Q 001901 952 HP 953 (998)
Q Consensus 952 ~~ 953 (998)
.|
T Consensus 212 sp 213 (214)
T cd07399 212 SP 213 (214)
T ss_pred CC
Confidence 66
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0025 Score=63.06 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=28.1
Q ss_pred eEEEeccccCCCCCh-H-HHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 733 DYLFLGDYVDRGQHS-L-ETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s-~-evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|++||+++.|... . +...++-.++... ..+++++||||.
T Consensus 38 ~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 38 LVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 688999999998742 2 2334444443322 379999999998
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00045 Score=76.36 Aligned_cols=70 Identities=20% Similarity=0.082 Sum_probs=49.7
Q ss_pred CCeEEEecCCCC----HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCC--CChHHHHHHHHHhhhcCCCcEEEeecC
Q 001901 698 APIKIFGDLHGQ----FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG--QHSLETITLLLALKVEYPNNVHLIRGN 771 (998)
Q Consensus 698 ~~i~vvGDiHG~----~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG--~~s~evl~ll~~lk~~~p~~v~llrGN 771 (998)
.+|.+++|||.. ...+.++++.......+ -++++|||+|++ ...-+++.+|..|+... .+|.+.||
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD------lVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GN 121 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPD------LILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGN 121 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC------EEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCC
Confidence 469999999976 45577777665432222 688999999954 23345666777776554 49999999
Q ss_pred cccc
Q 001901 772 HEAA 775 (998)
Q Consensus 772 HE~~ 775 (998)
||..
T Consensus 122 HD~~ 125 (271)
T PRK11340 122 HDRP 125 (271)
T ss_pred CCcc
Confidence 9973
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00044 Score=73.83 Aligned_cols=70 Identities=30% Similarity=0.300 Sum_probs=49.6
Q ss_pred CCeEEEecCCCCHH----HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH-HHHHHHHHhhhcCCCcEEEeecCc
Q 001901 698 APIKIFGDLHGQFG----DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-ETITLLLALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-evl~ll~~lk~~~p~~v~llrGNH 772 (998)
.++.+++|+|.... .+.++++.+.....+ -+|+.||++|.+.... ++..++..++ .+..++++.|||
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d------~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNH 73 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPD------LVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNH 73 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCC------EEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCc
Confidence 36899999998743 566776665432222 6888999999987765 5555555443 234699999999
Q ss_pred ccc
Q 001901 773 EAA 775 (998)
Q Consensus 773 E~~ 775 (998)
|..
T Consensus 74 D~~ 76 (223)
T cd07385 74 DYY 76 (223)
T ss_pred ccc
Confidence 984
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.014 Score=59.68 Aligned_cols=65 Identities=17% Similarity=0.252 Sum_probs=44.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
+.|.|++|.||...+..+.++.......+ -+|.+||++...... +|......+++.+|||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d------~vih~GD~~~~~~~~--------~l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVD------AVIHAGDSTSPFTLD--------ALEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCC------EEEECCCcCCccchH--------HhhcccccceEEEEccCCCcc
Confidence 46899999999997655555554433333 688899999865531 221112368999999999843
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0016 Score=70.16 Aligned_cols=177 Identities=13% Similarity=0.188 Sum_probs=87.8
Q ss_pred eEEEecCCCCH------HHHHHHHHHcCCCCCCCCccceeEEEeccccCC--CC---C--hHHHHHHHHHhhhcCCCcEE
Q 001901 700 IKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR--GQ---H--SLETITLLLALKVEYPNNVH 766 (998)
Q Consensus 700 i~vvGDiHG~~------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDR--G~---~--s~evl~ll~~lk~~~p~~v~ 766 (998)
+++++|+|... ..+++.+..... ..+ .++++||++|. |. . ..+++.+|..|+.. +..|+
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d------~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KAD------ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCC------EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEE
Confidence 36899999542 234454544321 112 68899999995 21 1 13456666666543 35799
Q ss_pred EeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeE-EEcCeEEEecCCccCccc-CHHhhhhccC-C
Q 001901 767 LIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAA-LIEKKIICMHGGIGRSIN-HVEQIENLQR-P 843 (998)
Q Consensus 767 llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa-~i~~~il~vHgGi~~~~~-~~~~i~~i~r-p 843 (998)
+++||||...-. ...+..| . .++.. +... +-+.+++++||-.-..-. ...-.+++-| |
T Consensus 73 ~v~GNHD~~~~~-------~~~~~~g----i-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~ 133 (231)
T TIGR01854 73 FMHGNRDFLIGK-------RFAREAG----M-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQP 133 (231)
T ss_pred EEcCCCchhhhH-------HHHHHCC----C-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCH
Confidence 999999973211 0111111 1 11111 1122 235689999997643100 0111122111 1
Q ss_pred cc------cCC-CCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccce
Q 001901 844 IT------MEA-GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910 (998)
Q Consensus 844 ~~------~~~-~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~ 910 (998)
.. ++. ....+...+++-..... . .+..-.....+..+.++++..+.+++|-||.=.+.=+
T Consensus 134 ~~~~~~~~l~~~~r~~l~~~~~~~s~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~ 200 (231)
T TIGR01854 134 WLQRLFLHLPLAVRVKLARKIRAESRADK---Q----MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIH 200 (231)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhc---C----CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCccee
Confidence 10 000 00112233333221100 0 0001123346788899999999999999998544333
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0018 Score=66.43 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=27.0
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 733 DYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s--~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.+|++||++|..... .+...+-+.......-.+++++||||..
T Consensus 44 ~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 44 RLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred EEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 799999999865432 2222211111223345799999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0027 Score=64.89 Aligned_cols=40 Identities=35% Similarity=0.535 Sum_probs=29.8
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+|++||++++|..... +.+|..+ +..+++++||||....
T Consensus 45 ~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 45 TVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred EEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 79999999999987644 4444443 3469999999997543
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0017 Score=70.31 Aligned_cols=68 Identities=26% Similarity=0.215 Sum_probs=46.4
Q ss_pred CeEEEecCCCCH-----H-HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCc
Q 001901 699 PIKIFGDLHGQF-----G-DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 699 ~i~vvGDiHG~~-----~-dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 772 (998)
+|.+++|+|..+ . .|.++++.+.-...+ -+|+.||++++.....+++..|..+ .+..|+++.|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d------~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKID------HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCC------EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCC
Confidence 478999999763 1 245565555322222 6899999999876666666555543 335699999999
Q ss_pred ccc
Q 001901 773 EAA 775 (998)
Q Consensus 773 E~~ 775 (998)
|..
T Consensus 72 D~~ 74 (239)
T TIGR03729 72 DML 74 (239)
T ss_pred CCC
Confidence 974
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.73 Score=53.78 Aligned_cols=187 Identities=16% Similarity=0.173 Sum_probs=100.6
Q ss_pred cEEEEECCCCc--EEEecCCCC-----CCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.+++||..+.+ |+.-..... ...++..-+.++.+++||+.+. ...++.||..+....|+.-.
T Consensus 80 ~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~---- 148 (394)
T PRK11138 80 LVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSE-------KGQVYALNAEDGEVAWQTKV---- 148 (394)
T ss_pred eEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcC-------CCEEEEEECCCCCCcccccC----
Confidence 67889988664 875332100 0112333345666788887543 24699999988766797643
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~ 303 (998)
+.. ...+-++.++ .+|+..+ + ..++.||+.+....|+.-..... ...+...+-++.++.+|+..+.
T Consensus 149 -~~~-~~ssP~v~~~-~v~v~~~-~-----g~l~ald~~tG~~~W~~~~~~~~--~~~~~~~sP~v~~~~v~~~~~~--- 214 (394)
T PRK11138 149 -AGE-ALSRPVVSDG-LVLVHTS-N-----GMLQALNESDGAVKWTVNLDVPS--LTLRGESAPATAFGGAIVGGDN--- 214 (394)
T ss_pred -CCc-eecCCEEECC-EEEEECC-C-----CEEEEEEccCCCEeeeecCCCCc--ccccCCCCCEEECCEEEEEcCC---
Confidence 111 1122234444 6776433 1 36999999998888988543211 0001112233456776664321
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCC----Cc---ceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe--
Q 001901 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPS----PR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV-- 374 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~w~~~~g~~P~----pR---~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~-- 374 (998)
..++.++.. +++-.|......+.. .| ...+-++.++.+|+.+. ...++.+|+.+.+
T Consensus 215 ----g~v~a~d~~-~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~----------~g~l~ald~~tG~~~ 279 (394)
T PRK11138 215 ----GRVSAVLME-QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAY----------NGNLVALDLRSGQIV 279 (394)
T ss_pred ----CEEEEEEcc-CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEc----------CCeEEEEECCCCCEE
Confidence 234555543 344344332211110 01 12344567888888642 2358999998874
Q ss_pred EEE
Q 001901 375 WCD 377 (998)
Q Consensus 375 W~~ 377 (998)
|+.
T Consensus 280 W~~ 282 (394)
T PRK11138 280 WKR 282 (394)
T ss_pred Eee
Confidence 764
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.059 Score=59.17 Aligned_cols=28 Identities=7% Similarity=0.100 Sum_probs=22.0
Q ss_pred HHHHHHHHHHcCCcEEEEcccccccceE
Q 001901 884 PDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (998)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (998)
...+.+.|++.++++++-||.=......
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceE
Confidence 3567778899999999999997655543
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0035 Score=69.12 Aligned_cols=73 Identities=23% Similarity=0.350 Sum_probs=47.3
Q ss_pred CeEEEecCC-CC------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC-hHHHHHHHHHhhhcCCCc
Q 001901 699 PIKIFGDLH-GQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-SLETITLLLALKVEYPNN 764 (998)
Q Consensus 699 ~i~vvGDiH-G~------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s~evl~ll~~lk~~~p~~ 764 (998)
++.+++|+| +. ...|.++++.+.....+ -+|++||+++.|.. +.+-+..++.+-...+-.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d------~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p 75 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLD------FVVQLGDIIDGDNARAEEALDAVLAILDRLKGP 75 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCC------EEEECCCeecCCCchHHHHHHHHHHHHHhcCCC
Confidence 588999999 22 45666677666432222 58899999998873 223333333333333356
Q ss_pred EEEeecCccccch
Q 001901 765 VHLIRGNHEAADI 777 (998)
Q Consensus 765 v~llrGNHE~~~~ 777 (998)
++++.||||....
T Consensus 76 ~~~v~GNHD~~~~ 88 (267)
T cd07396 76 VHHVLGNHDLYNP 88 (267)
T ss_pred EEEecCccccccc
Confidence 9999999998644
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0026 Score=67.67 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=46.1
Q ss_pred CeEEEecCC-CCH--------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcC--
Q 001901 699 PIKIFGDLH-GQF--------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY-- 761 (998)
Q Consensus 699 ~i~vvGDiH-G~~--------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~-- 761 (998)
+++.++|+| |.. ..|.++++.+.....+ .+|+.||++|....+.+.+..+..+-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVD------FVLIAGDLFDSNNPSPEALELLIEALRRLKE 74 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCC------EEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 478999999 422 2355555554332222 68999999998876555443333332222
Q ss_pred -CCcEEEeecCccccch
Q 001901 762 -PNNVHLIRGNHEAADI 777 (998)
Q Consensus 762 -p~~v~llrGNHE~~~~ 777 (998)
.-.++++.||||....
T Consensus 75 ~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 75 AGIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCCEEEecCCCCCccc
Confidence 3469999999998654
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0042 Score=67.96 Aligned_cols=72 Identities=25% Similarity=0.295 Sum_probs=45.9
Q ss_pred CCeEEEecCC-CC-----------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHH----HHHHHhhhcC
Q 001901 698 APIKIFGDLH-GQ-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI----TLLLALKVEY 761 (998)
Q Consensus 698 ~~i~vvGDiH-G~-----------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl----~ll~~lk~~~ 761 (998)
.+++.++|+| |. +..|.++++.+.-...+ .+|+.||++|+..-+.+.. .+|..|+...
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D------~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~ 74 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQID------ALLVAGDVFDTANPPAEAQELFNAFFRNLSDAN 74 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 3688999999 32 22344444443222222 6899999999986655443 3444554443
Q ss_pred CCcEEEeecCcccc
Q 001901 762 PNNVHLIRGNHEAA 775 (998)
Q Consensus 762 p~~v~llrGNHE~~ 775 (998)
|-.|+++.||||..
T Consensus 75 ~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 75 PIPIVVISGNHDSA 88 (253)
T ss_pred CceEEEEccCCCCh
Confidence 35799999999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0043 Score=67.98 Aligned_cols=70 Identities=20% Similarity=0.328 Sum_probs=44.4
Q ss_pred eEEEecCCCCHHHHHHHHHHcCC---CCCCCCccceeEEEeccccCCCC-ChHHHHH------HHHHh------hhcCCC
Q 001901 700 IKIFGDLHGQFGDLMRLFDEYGS---PSTAGDIAYIDYLFLGDYVDRGQ-HSLETIT------LLLAL------KVEYPN 763 (998)
Q Consensus 700 i~vvGDiHG~~~dL~~il~~~g~---~~~~~~~~~~~~vfLGDyVDRG~-~s~evl~------ll~~l------k~~~p~ 763 (998)
|+|+||+||++..+.+.++.... ...+ -+|++||+-..+. ..++.+. -+..+ ..+.|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D------~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVD------LLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPI 74 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCc------EEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCe
Confidence 68999999999888775544321 1222 5888999975443 3343331 11111 334566
Q ss_pred cEEEeecCcccc
Q 001901 764 NVHLIRGNHEAA 775 (998)
Q Consensus 764 ~v~llrGNHE~~ 775 (998)
-+++|-||||..
T Consensus 75 ~t~fi~GNHE~~ 86 (262)
T cd00844 75 LTIFIGGNHEAS 86 (262)
T ss_pred eEEEECCCCCCH
Confidence 789999999974
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0095 Score=71.55 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=44.2
Q ss_pred cCCeEEEecCC-CCH----HHHHHHHHHc-CCCCCCC--CccceeEEEeccccCC-CCCh---------------HHHHH
Q 001901 697 KAPIKIFGDLH-GQF----GDLMRLFDEY-GSPSTAG--DIAYIDYLFLGDYVDR-GQHS---------------LETIT 752 (998)
Q Consensus 697 ~~~i~vvGDiH-G~~----~dL~~il~~~-g~~~~~~--~~~~~~~vfLGDyVDR-G~~s---------------~evl~ 752 (998)
...+++++||| |.- ..+.++++.+ |...... ...-..+|++||+||. |.+. -++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35689999999 652 2234444433 2221100 0001268999999994 3211 13444
Q ss_pred HHHHhhhcCCCcEEEeecCccccch
Q 001901 753 LLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 753 ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
+|..|.. .-.|++++||||....
T Consensus 323 ~L~~L~~--~i~V~~ipGNHD~~~~ 345 (504)
T PRK04036 323 YLKQIPE--DIKIIISPGNHDAVRQ 345 (504)
T ss_pred HHHhhhc--CCeEEEecCCCcchhh
Confidence 5555432 2369999999997543
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0059 Score=69.76 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=44.8
Q ss_pred CCeEEEecCC-C-----------CHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCC-CChHHHHHHHHH----hhhc
Q 001901 698 APIKIFGDLH-G-----------QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG-QHSLETITLLLA----LKVE 760 (998)
Q Consensus 698 ~~i~vvGDiH-G-----------~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~----lk~~ 760 (998)
++++.++|+| | +...|.++++.+.-...+ -+|+.||++|+. ..+.+++.++.. +-..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD------~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~ 74 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGIT------TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKE 74 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCC------EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3688999999 4 223445554444322222 688999999985 445555444432 2122
Q ss_pred CCCcEEEeecCcccc
Q 001901 761 YPNNVHLIRGNHEAA 775 (998)
Q Consensus 761 ~p~~v~llrGNHE~~ 775 (998)
.+-.|++|.||||..
T Consensus 75 ~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 75 AGITLHVLVGNHDMY 89 (340)
T ss_pred CCCeEEEEccCCCcc
Confidence 345799999999974
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0075 Score=64.00 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=20.7
Q ss_pred eCHHHHHHHHHHcCCcEEEEcccccc
Q 001901 882 FGPDRVMEFCNNNDLQLIVRAHECVM 907 (998)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (998)
.....+.+.++..+.+++|-||.=..
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~ 201 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRP 201 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 34566777888999999999998554
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.011 Score=63.85 Aligned_cols=69 Identities=26% Similarity=0.328 Sum_probs=43.9
Q ss_pred CeEEEecCCCC------------HHHHHHHHHHcCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCc
Q 001901 699 PIKIFGDLHGQ------------FGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764 (998)
Q Consensus 699 ~i~vvGDiHG~------------~~dL~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~ 764 (998)
++.+++|||=. ...|.++++.+... ..+ -+|++||+++.|.. +-...++.+..+.+-.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d------~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPD------LVLVTGDLTDDGSP--ESYERLRELLAALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCC------EEEECccCCCCCCH--HHHHHHHHHHhhcCCC
Confidence 47899999944 34567777765432 222 58899999998753 2222222222223456
Q ss_pred EEEeecCcccc
Q 001901 765 VHLIRGNHEAA 775 (998)
Q Consensus 765 v~llrGNHE~~ 775 (998)
++.++||||..
T Consensus 73 ~~~v~GNHD~~ 83 (240)
T cd07402 73 VYLLPGNHDDR 83 (240)
T ss_pred EEEeCCCCCCH
Confidence 99999999974
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=1.5 Score=51.08 Aligned_cols=181 Identities=17% Similarity=0.209 Sum_probs=100.4
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec--CCC
Q 001901 149 TADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPG 224 (998)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~--g~~ 224 (998)
.+.++.||..+.+ |+.-.... ....+...+-++.++.+|+..+. ..++.+|..+....|...... +..
T Consensus 169 ~g~l~ald~~tG~~~W~~~~~~~-~~~~~~~~sP~v~~~~v~~~~~~-------g~v~a~d~~~G~~~W~~~~~~~~~~~ 240 (394)
T PRK11138 169 NGMLQALNESDGAVKWTVNLDVP-SLTLRGESAPATAFGGAIVGGDN-------GRVSAVLMEQGQLIWQQRISQPTGAT 240 (394)
T ss_pred CCEEEEEEccCCCEeeeecCCCC-cccccCCCCCEEECCEEEEEcCC-------CEEEEEEccCChhhheeccccCCCcc
Confidence 3568999998875 87643220 01112222334456676664432 458889998876678753211 100
Q ss_pred CCCC---cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001901 225 PGPR---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (998)
Q Consensus 225 P~~R---~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~ 301 (998)
...| ...+-++.++ .+|+.+. + ..++++|+.+....|+.-.. .. ...++.+++||+...
T Consensus 241 ~~~~~~~~~~sP~v~~~-~vy~~~~-~-----g~l~ald~~tG~~~W~~~~~--~~-------~~~~~~~~~vy~~~~-- 302 (394)
T PRK11138 241 EIDRLVDVDTTPVVVGG-VVYALAY-N-----GNLVALDLRSGQIVWKREYG--SV-------NDFAVDGGRIYLVDQ-- 302 (394)
T ss_pred chhcccccCCCcEEECC-EEEEEEc-C-----CeEEEEECCCCCEEEeecCC--Cc-------cCcEEECCEEEEEcC--
Confidence 0001 1123344555 7887553 2 36899999988778986421 10 123456889998753
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
...++.++..+ ++=.|.... ...+...+.++.++++|+... ...++++|..+.+
T Consensus 303 -----~g~l~ald~~t-G~~~W~~~~---~~~~~~~sp~v~~g~l~v~~~----------~G~l~~ld~~tG~ 356 (394)
T PRK11138 303 -----NDRVYALDTRG-GVELWSQSD---LLHRLLTAPVLYNGYLVVGDS----------EGYLHWINREDGR 356 (394)
T ss_pred -----CCeEEEEECCC-CcEEEcccc---cCCCcccCCEEECCEEEEEeC----------CCEEEEEECCCCC
Confidence 23467776643 333343221 112333445667899987532 2348889998875
|
|
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.11 Score=57.55 Aligned_cols=74 Identities=27% Similarity=0.357 Sum_probs=50.0
Q ss_pred CeEEEecCCCC------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC-hHHHHHHHHHhhhcCCCcEEEeecC
Q 001901 699 PIKIFGDLHGQ------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-SLETITLLLALKVEYPNNVHLIRGN 771 (998)
Q Consensus 699 ~i~vvGDiHG~------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s~evl~ll~~lk~~~p~~v~llrGN 771 (998)
++..|+|+|-- ...+.++++.+.....+ -+|+.||+.++|.. ..+-+..++. +...+..+++++||
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D------~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGN 74 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPD------LLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGN 74 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCC------EEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCC
Confidence 57889999976 34556666776643333 69999999999642 2222222222 23667889999999
Q ss_pred ccccchhh
Q 001901 772 HEAADINA 779 (998)
Q Consensus 772 HE~~~~~~ 779 (998)
||....+.
T Consensus 75 HD~~~~~~ 82 (301)
T COG1409 75 HDARVVNG 82 (301)
T ss_pred CcCCchHH
Confidence 99976653
|
|
| >KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.00054 Score=76.00 Aligned_cols=208 Identities=9% Similarity=-0.119 Sum_probs=138.5
Q ss_pred eeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccc
Q 001901 732 IDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLP 811 (998)
Q Consensus 732 ~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP 811 (998)
...|+|+++++++...++.+-+.+..++.|-.+-..++++|+ ..+++++++.-.-.......+|+.+++.+..++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~-----~~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHG-----DSSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhcc-----CcchhhhheeecccccCceEEEEeccCcCccce
Confidence 368999999999999999999999999998888889999994 355667766666566667789999999999999
Q ss_pred eeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCC--CCCcccCCCCCCceeeCHH--HH
Q 001901 812 LAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS--VEGLRPNARGPGLVTFGPD--RV 887 (998)
Q Consensus 812 ~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~--~~~~~~n~rg~~~~~fg~~--~~ 887 (998)
..++.. +++|.||++.|...+...+.++.-...-+.+ ...+. |-++.+.+. ..-|. .++.. ..||-| ..
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~--gn~kg-~f~llD~~~~~k~tw~--~~~~~-p~~gyDfwyq 196 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAE--GNAKG-GFLLLDSDFNEKGTWE--KPGHS-PLFGYDFWYQ 196 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccc--cCCcC-CeEEecCccceecccc--cCCCc-cccccceeec
Confidence 997777 9999999999987766555433211111111 11111 333332110 11121 11211 223322 22
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCC--ceEEeEEecc
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRD--LVVVPKLIHP 953 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~--~~~~~~~~~~ 953 (998)
-.+......+.+.+.|...-.++..+.++ ++.|+..-|.-...|.++.+-++.+ +.++.+.+|-
T Consensus 197 pr~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~ 262 (476)
T KOG0918|consen 197 PRHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHN 262 (476)
T ss_pred cccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeeccC
Confidence 34556667777888888544444455565 8889999998888899999988875 2334444443
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.015 Score=62.30 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=41.4
Q ss_pred CCeEEEecCC-CCHHH----------------HHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh---HHHHHHHHHh
Q 001901 698 APIKIFGDLH-GQFGD----------------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS---LETITLLLAL 757 (998)
Q Consensus 698 ~~i~vvGDiH-G~~~d----------------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s---~evl~ll~~l 757 (998)
+.+.||+|+| |--.. |.++.+.......+ .+|++||+++..... -++..+|..+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d------~vIi~GDl~h~~~~~~~~~~~~~~l~~~ 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIE------ALIINGDLKHEFKKGLEWRFIREFIEVT 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCC------EEEEcCccccccCChHHHHHHHHHHHhc
Confidence 6799999999 54222 22232322221122 799999999765542 2223333332
Q ss_pred hhcCCCcEEEeecCccccc
Q 001901 758 KVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 758 k~~~p~~v~llrGNHE~~~ 776 (998)
...+++++||||...
T Consensus 89 ----~~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 89 ----FRDLILIRGNHDALI 103 (225)
T ss_pred ----CCcEEEECCCCCCcc
Confidence 247999999999743
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0095 Score=60.16 Aligned_cols=43 Identities=23% Similarity=0.349 Sum_probs=27.7
Q ss_pred eEEEeccccCCCCCh--H---HHHHHHHHhhhcC-CCcEEEeecCcccc
Q 001901 733 DYLFLGDYVDRGQHS--L---ETITLLLALKVEY-PNNVHLIRGNHEAA 775 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s--~---evl~ll~~lk~~~-p~~v~llrGNHE~~ 775 (998)
.+||+||++|.+... . +.+..+..+.... .-.++++.||||..
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 699999999988642 1 2222233322222 24699999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=95.97 E-value=2.8 Score=44.59 Aligned_cols=181 Identities=19% Similarity=0.215 Sum_probs=103.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEE-eeecCCCCC
Q 001901 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR-VVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~-l~~~g~~P~ 226 (998)
..+++||..+++ |+.-... +.....+..++.+|+..+. +.++.+|..+....|.. .......+
T Consensus 46 ~~l~~~d~~tG~~~W~~~~~~------~~~~~~~~~~~~v~v~~~~-------~~l~~~d~~tG~~~W~~~~~~~~~~~- 111 (238)
T PF13360_consen 46 GNLYALDAKTGKVLWRFDLPG------PISGAPVVDGGRVYVGTSD-------GSLYALDAKTGKVLWSIYLTSSPPAG- 111 (238)
T ss_dssp SEEEEEETTTSEEEEEEECSS------CGGSGEEEETTEEEEEETT-------SEEEEEETTTSCEEEEEEE-SSCTCS-
T ss_pred CEEEEEECCCCCEEEEeeccc------cccceeeecccccccccce-------eeeEecccCCcceeeeeccccccccc-
Confidence 489999998875 7665422 2222246778888887632 37999998887778994 43211111
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCC----ccceEEEEEeCCEEEEEeccCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP----CMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~----r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.+......+.++ .+|+... -..++.+|+.+....|......+..... .......++.++.+|++.+..
T Consensus 112 ~~~~~~~~~~~~-~~~~~~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g- 183 (238)
T PF13360_consen 112 VRSSSSPAVDGD-RLYVGTS------SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG- 183 (238)
T ss_dssp TB--SEEEEETT-EEEEEET------CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS-
T ss_pred cccccCceEecC-EEEEEec------cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC-
Confidence 233344444454 5666543 2478999999888789885533211000 001233445567888876533
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.++.++ ..++.-.|...... ........++.||+.. . ...++++|++|++
T Consensus 184 ------~~~~~d-~~tg~~~w~~~~~~-----~~~~~~~~~~~l~~~~-~---------~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 184 ------RVVAVD-LATGEKLWSKPISG-----IYSLPSVDGGTLYVTS-S---------DGRLYALDLKTGK 233 (238)
T ss_dssp ------SEEEEE-TTTTEEEEEECSS------ECECEECCCTEEEEEE-T---------TTEEEEEETTTTE
T ss_pred ------eEEEEE-CCCCCEEEEecCCC-----ccCCceeeCCEEEEEe-C---------CCEEEEEECCCCC
Confidence 156664 44455345332111 1122455577888765 2 2459999999985
|
... |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.039 Score=61.54 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEE
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLI 919 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~i 919 (998)
....+.+.|+++++++++-||.-...-+....+++++
T Consensus 181 ~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~ 217 (294)
T cd00839 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV 217 (294)
T ss_pred HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec
Confidence 3456778899999999999998654433334455543
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.012 Score=68.75 Aligned_cols=71 Identities=23% Similarity=0.371 Sum_probs=43.5
Q ss_pred CeEEEecCC-CC-H------HH----HHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHH----HHHHHhhhcCC
Q 001901 699 PIKIFGDLH-GQ-F------GD----LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI----TLLLALKVEYP 762 (998)
Q Consensus 699 ~i~vvGDiH-G~-~------~d----L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl----~ll~~lk~~~p 762 (998)
+++.++|+| |. + .+ |.++.+.+.-...+ -+|+.||++|++..+.+.. .++..|+.. +
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D------~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~ 74 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVD------AIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-G 74 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCC------EEEECCccccCCCCcHHHHHHHHHHHHHHHhc-C
Confidence 688999999 42 1 11 22333333222222 6889999999986554432 334445432 3
Q ss_pred CcEEEeecCccccc
Q 001901 763 NNVHLIRGNHEAAD 776 (998)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (998)
-.|+++.||||...
T Consensus 75 ~~v~~I~GNHD~~~ 88 (407)
T PRK10966 75 CQLVVLAGNHDSVA 88 (407)
T ss_pred CcEEEEcCCCCChh
Confidence 46999999999753
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.018 Score=63.77 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=45.6
Q ss_pred CCeEEEecCC-C-----------CHHHHHHHHHHcCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 001901 698 APIKIFGDLH-G-----------QFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (998)
Q Consensus 698 ~~i~vvGDiH-G-----------~~~dL~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~ 763 (998)
.+++.++|+| . ....|.++++.+... ..+ -+|+.||++|.|. .+-+..++..-.+.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D------~vvitGDl~~~~~--~~~~~~~~~~l~~l~~ 86 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFD------LIVATGDLAQDHS--SEAYQHFAEGIAPLRK 86 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCC------EEEECCCCCCCCC--HHHHHHHHHHHhhcCC
Confidence 4589999999 1 145677777765321 112 5889999999885 2333333333333456
Q ss_pred cEEEeecCcccc
Q 001901 764 NVHLIRGNHEAA 775 (998)
Q Consensus 764 ~v~llrGNHE~~ 775 (998)
.++++.||||..
T Consensus 87 Pv~~v~GNHD~~ 98 (275)
T PRK11148 87 PCVWLPGNHDFQ 98 (275)
T ss_pred cEEEeCCCCCCh
Confidence 799999999973
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.025 Score=59.35 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=30.1
Q ss_pred eEEEeccccCCCCC---hHHHHHHHHHhhhcCCCcEEEeecCcc
Q 001901 733 DYLFLGDYVDRGQH---SLETITLLLALKVEYPNNVHLIRGNHE 773 (998)
Q Consensus 733 ~~vfLGDyVDRG~~---s~evl~ll~~lk~~~p~~v~llrGNHE 773 (998)
.+|++||+++.+.. +.+.+..++.......-.++++.||||
T Consensus 44 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 44 LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 68999999997765 356666555544434456899999999
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=95.74 E-value=1 Score=48.24 Aligned_cols=164 Identities=13% Similarity=0.137 Sum_probs=91.7
Q ss_pred ccEEEEEcCCCCCceEEeeecCCCCCCC---ccc-EEEEE----CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPR---YGH-VMALV----GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 201 ~dv~~~Dl~t~t~~W~~l~~~g~~P~~R---~~h-s~~~~----~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
..++++|+.|. +|..++. .+.++ ..+ ...-+ ++-+++.+....+......+++|++.++ .|+.+.
T Consensus 14 ~~~~V~NP~T~--~~~~LP~---~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~~~~~~~~Vys~~~~--~Wr~~~ 86 (230)
T TIGR01640 14 KRLVVWNPSTG--QSRWLPT---PKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGNRNQSEHQVYTLGSN--SWRTIE 86 (230)
T ss_pred CcEEEECCCCC--CEEecCC---CCCcccccccceEEEeecccCCcEEEEEEEeecCCCCCccEEEEEeCCC--Cccccc
Confidence 46999999997 5888862 22211 111 11111 1225555544322223457899999999 999987
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEE-EEECCCCCCCCcceeEEEEECCEEEEEcc
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWE-WAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~-w~~~~g~~P~pR~~hsav~~~~~L~V~GG 351 (998)
... +....... .+..+|.||-+.-..... ....+..||..+. +|. ....+............+.++|+|.++..
T Consensus 87 ~~~--~~~~~~~~-~v~~~G~lyw~~~~~~~~-~~~~IvsFDl~~E-~f~~~i~~P~~~~~~~~~~~L~~~~G~L~~v~~ 161 (230)
T TIGR01640 87 CSP--PHHPLKSR-GVCINGVLYYLAYTLKTN-PDYFIVSFDVSSE-RFKEFIPLPCGNSDSVDYLSLINYKGKLAVLKQ 161 (230)
T ss_pred cCC--CCccccCC-eEEECCEEEEEEEECCCC-CcEEEEEEEcccc-eEeeeeecCccccccccceEEEEECCEEEEEEe
Confidence 432 11111222 456688888876433211 1225777877765 555 34333211111223456777899888765
Q ss_pred cCCCCCccccCCeEEEEE-CCCCeEEEcccC
Q 001901 352 ALGGGRMVEDSSSVAVLD-TAAGVWCDTKSV 381 (998)
Q Consensus 352 ~~~~~~~~~~~~dv~vyD-~~t~~W~~v~~~ 381 (998)
..... .-+||+++ ....+|+++-..
T Consensus 162 ~~~~~-----~~~IWvl~d~~~~~W~k~~~i 187 (230)
T TIGR01640 162 KKDTN-----NFDLWVLNDAGKQEWSKLFTV 187 (230)
T ss_pred cCCCC-----cEEEEEECCCCCCceeEEEEE
Confidence 32211 35799996 446679987665
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.034 Score=60.37 Aligned_cols=42 Identities=26% Similarity=0.308 Sum_probs=26.8
Q ss_pred eEEEeccccCCCC-----C-------h----HHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 733 DYLFLGDYVDRGQ-----H-------S----LETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 733 ~~vfLGDyVDRG~-----~-------s----~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
.+|++||++|+.. . . .++..+|-.|.. .-.|+++.||||...
T Consensus 38 ~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~--~~~v~~ipGNHD~~~ 95 (243)
T cd07386 38 YLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS--HIKIIIIPGNHDAVR 95 (243)
T ss_pred EEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc--CCeEEEeCCCCCccc
Confidence 7899999999731 0 0 122334344432 246999999999853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.034 Score=60.03 Aligned_cols=45 Identities=9% Similarity=-0.020 Sum_probs=28.7
Q ss_pred eCHHHHHHHHHHcCCcEEEEcccccccceE---EecCCeEEEEecccccc
Q 001901 882 FGPDRVMEFCNNNDLQLIVRAHECVMDGFE---RFAQGHLITLFSATNYC 928 (998)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~---~~~~~~~iTvfSa~~y~ 928 (998)
++...+.+.+++.++++++-||.=...-.. ...+| |+.++++.=|
T Consensus 180 ~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~ 227 (232)
T cd07393 180 GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADY 227 (232)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchh
Confidence 355677888899999999999974322211 12333 5666666544
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.42 Score=52.44 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=24.0
Q ss_pred eCHHHHHHHHHHcCCcEEEEcccccccceEEe
Q 001901 882 FGPDRVMEFCNNNDLQLIVRAHECVMDGFERF 913 (998)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~ 913 (998)
-.++..++.|+..+-.+|.-||+- ++.+..
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~ 232 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVV 232 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeE
Confidence 478999999999999999999983 444443
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=95.38 E-value=7.1 Score=45.07 Aligned_cols=181 Identities=18% Similarity=0.192 Sum_probs=94.7
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+++||..+++ |+.-... +..-+.++.++.+|+.+. ...++.||..+....|.... +..
T Consensus 76 ~v~a~d~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~-----~~~- 136 (377)
T TIGR03300 76 TVVALDAETGKRLWRVDLDE------RLSGGVGADGGLVFVGTE-------KGEVIALDAEDGKELWRAKL-----SSE- 136 (377)
T ss_pred eEEEEEccCCcEeeeecCCC------CcccceEEcCCEEEEEcC-------CCEEEEEECCCCcEeeeecc-----Cce-
Confidence 68899988764 8654322 112233444667776443 24699999987666787543 111
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
...+.++.++ .+|+..+ + ..++.||+.+....|+.-..... .........++.++.+| +|..+ .
T Consensus 137 ~~~~p~v~~~-~v~v~~~-~-----g~l~a~d~~tG~~~W~~~~~~~~--~~~~~~~sp~~~~~~v~-~~~~~------g 200 (377)
T TIGR03300 137 VLSPPLVANG-LVVVRTN-D-----GRLTALDAATGERLWTYSRVTPA--LTLRGSASPVIADGGVL-VGFAG------G 200 (377)
T ss_pred eecCCEEECC-EEEEECC-C-----CeEEEEEcCCCceeeEEccCCCc--eeecCCCCCEEECCEEE-EECCC------C
Confidence 1122333444 6666433 2 35899999888778986533211 00111122334466554 44321 2
Q ss_pred cEEEEecCCCCeEEEEECCCCCC----CCc---ceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe--EEE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSP----SPR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P----~pR---~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--W~~ 377 (998)
.++.++.. +++-.|......+. ..| ...+.++.++.+|+... ...+++||+++.+ |..
T Consensus 201 ~v~ald~~-tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~----------~g~l~a~d~~tG~~~W~~ 267 (377)
T TIGR03300 201 KLVALDLQ-TGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY----------QGRVAALDLRSGRVLWKR 267 (377)
T ss_pred EEEEEEcc-CCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc----------CCEEEEEECCCCcEEEee
Confidence 45666654 33334432211110 001 12334556788887542 2358999998764 654
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=95.32 E-value=4.2 Score=46.97 Aligned_cols=185 Identities=18% Similarity=0.238 Sum_probs=99.6
Q ss_pred cCCcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 148 ATADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 148 ~~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
....++.||..+.+ |+.-... ....+.++.++.+|+..+ ...++.+|..+....|..-... +..
T Consensus 113 ~~g~l~ald~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~~-~~~ 178 (377)
T TIGR03300 113 EKGEVIALDAEDGKELWRAKLSS------EVLSPPLVANGLVVVRTN-------DGRLTALDAATGERLWTYSRVT-PAL 178 (377)
T ss_pred CCCEEEEEECCCCcEeeeeccCc------eeecCCEEECCEEEEECC-------CCeEEEEEcCCCceeeEEccCC-Cce
Confidence 34578999987764 8754321 112233445677777543 2459999998866678764311 100
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCC--CCCcc--ceEEEEEeCCEEEEEeccC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG--PPPCM--YATASARSDGLLLLCGGRD 301 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~--P~~r~--~~~a~~~~~~~lyvfGG~~ 301 (998)
..+...+.++.++ .+ ++|..++ .+..+|+.+....|+.-...+.. ...+. ......+.++.+|+...
T Consensus 179 ~~~~~~sp~~~~~-~v-~~~~~~g-----~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~-- 249 (377)
T TIGR03300 179 TLRGSASPVIADG-GV-LVGFAGG-----KLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY-- 249 (377)
T ss_pred eecCCCCCEEECC-EE-EEECCCC-----EEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc--
Confidence 1122233444554 44 4444332 68899998887788753221110 00010 11223456788887542
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCC--eEEE
Q 001901 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCD 377 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~--~W~~ 377 (998)
...++.++.. +++-.|....+ ...+.++.++++|+... ...++++|..+. .|+.
T Consensus 250 -----~g~l~a~d~~-tG~~~W~~~~~------~~~~p~~~~~~vyv~~~----------~G~l~~~d~~tG~~~W~~ 305 (377)
T TIGR03300 250 -----QGRVAALDLR-SGRVLWKRDAS------SYQGPAVDDNRLYVTDA----------DGVVVALDRRSGSELWKN 305 (377)
T ss_pred -----CCEEEEEECC-CCcEEEeeccC------CccCceEeCCEEEEECC----------CCeEEEEECCCCcEEEcc
Confidence 1246677664 33333433211 11234567888988642 245899998876 4754
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.043 Score=63.80 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=53.2
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 001901 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (998)
Q Consensus 698 ~~i~vvGDiHG~------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (998)
.+|.+++|+|-- +..|.++++.+.-...+ -+|+-||++|+..-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD------~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~ 77 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVD------MILLGGDLFHENKPSRKSLYQVLRSLRLYCLGD 77 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHhhccC
Confidence 468999999932 45677777776433333 5888999999999998888665554332
Q ss_pred -------------------------------CCCcEEEeecCccccc
Q 001901 761 -------------------------------YPNNVHLIRGNHEAAD 776 (998)
Q Consensus 761 -------------------------------~p~~v~llrGNHE~~~ 776 (998)
..--||+|-||||...
T Consensus 78 ~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 78 KPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred CccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1237999999999965
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.057 Score=59.21 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=21.8
Q ss_pred HHHHHHHcCCcEEEEcccccccceEEe
Q 001901 887 VMEFCNNNDLQLIVRAHECVMDGFERF 913 (998)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~ 913 (998)
+.+.|++.++++++-||.=...+.+..
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceee
Confidence 778899999999999999766664544
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=95.11 E-value=5.5 Score=42.29 Aligned_cols=182 Identities=21% Similarity=0.306 Sum_probs=102.6
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCccceE--EEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHV--ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hs--a~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+..+|+.+++ |+.-.. + +..+.. .+..++.+|+..+ ...+++||..+....|+.-. +
T Consensus 4 ~l~~~d~~tG~~~W~~~~~----~-~~~~~~~~~~~~~~~v~~~~~-------~~~l~~~d~~tG~~~W~~~~-----~- 65 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLG----P-GIGGPVATAVPDGGRVYVASG-------DGNLYALDAKTGKVLWRFDL-----P- 65 (238)
T ss_dssp EEEEEETTTTEEEEEEECS----S-SCSSEEETEEEETTEEEEEET-------TSEEEEEETTTSEEEEEEEC-----S-
T ss_pred EEEEEECCCCCEEEEEECC----C-CCCCccceEEEeCCEEEEEcC-------CCEEEEEECCCCCEEEEeec-----c-
Confidence 57788887764 876321 1 122222 3336778888843 36799999988766788764 1
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~ 305 (998)
.+.....+..++ .+|+..+. +.++.||..+....|+. ...... ..........+.++.+|+...
T Consensus 66 ~~~~~~~~~~~~-~v~v~~~~------~~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 130 (238)
T PF13360_consen 66 GPISGAPVVDGG-RVYVGTSD------GSLYALDAKTGKVLWSIYLTSSPP--AGVRSSSSPAVDGDRLYVGTS------ 130 (238)
T ss_dssp SCGGSGEEEETT-EEEEEETT------SEEEEEETTTSCEEEEEEE-SSCT--CSTB--SEEEEETTEEEEEET------
T ss_pred ccccceeeeccc-ccccccce------eeeEecccCCcceeeeeccccccc--cccccccCceEecCEEEEEec------
Confidence 122222445555 67776521 27999999998889994 443211 112233344445777777643
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCC-------cceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe--EE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSP-------RYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WC 376 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~p-------R~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--W~ 376 (998)
...++.++.. +|+-.|......++.. ......++.++.+|+..+. ..+..+|.++.+ |+
T Consensus 131 -~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----------g~~~~~d~~tg~~~w~ 198 (238)
T PF13360_consen 131 -SGKLVALDPK-TGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGD----------GRVVAVDLATGEKLWS 198 (238)
T ss_dssp -CSEEEEEETT-TTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCT----------SSEEEEETTTTEEEEE
T ss_pred -cCcEEEEecC-CCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCC----------CeEEEEECCCCCEEEE
Confidence 3456777655 3443444433332211 1123444456788887653 125666999997 84
Q ss_pred E
Q 001901 377 D 377 (998)
Q Consensus 377 ~ 377 (998)
.
T Consensus 199 ~ 199 (238)
T PF13360_consen 199 K 199 (238)
T ss_dssp E
T ss_pred e
Confidence 3
|
... |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.09 Score=55.84 Aligned_cols=196 Identities=19% Similarity=0.238 Sum_probs=101.4
Q ss_pred EEecCCCC------HHHHHHHHHHcCCCCCCCCccceeEEEeccccC--CCCC-----hHHHHHHHHHhhhcCCCcEEEe
Q 001901 702 IFGDLHGQ------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD--RGQH-----SLETITLLLALKVEYPNNVHLI 768 (998)
Q Consensus 702 vvGDiHG~------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVD--RG~~-----s~evl~ll~~lk~~~p~~v~ll 768 (998)
.|+|+|=. -+-|+++++.... ..+ .+.+|||++| .|.+ --+|...|..+.. -..++|.+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad------~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i 73 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA-QAD------ALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYI 73 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc-cCc------EEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEe
Confidence 57888844 2344555554322 222 6889999998 3433 2345555554432 34689999
Q ss_pred ecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEE---cCeEEEecCCccCcccC------------
Q 001901 769 RGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRSINH------------ 833 (998)
Q Consensus 769 rGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i---~~~il~vHgGi~~~~~~------------ 833 (998)
.||||. .+...+ ....| .+.-+|-..++ +.+++++||-.-.....
T Consensus 74 ~GN~Df-ll~~~f------~~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~ 133 (237)
T COG2908 74 HGNHDF-LLGKRF------AQEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWA 133 (237)
T ss_pred cCchHH-HHHHHH------HhhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccH
Confidence 999995 332222 11122 12334444433 67999999976432100
Q ss_pred HHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCC--CceeeCHHHHHHHHHHcCCcEEEEcccccccceE
Q 001901 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGP--GLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (998)
Q Consensus 834 ~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~--~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (998)
..++.-+.+|+... ..+..=+|+.-. |....... -.....+.++.+-++++|++.+|.||.=.+..-.
T Consensus 134 ~~~~lflnl~l~~R---~ri~~k~r~~s~-------~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~ 203 (237)
T COG2908 134 WLQLLFLNLPLRVR---RRIAYKIRSLSS-------WAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHN 203 (237)
T ss_pred HHHHHHHHhHHHHH---HHHHHHHHHhhH-------HhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhcc
Confidence 01111122222210 011122444431 11110000 0122467778888999999999999986654443
Q ss_pred EecCCeEEEEecccccc--CCCCCeEEEEEEcCCce
Q 001901 912 RFAQGHLITLFSATNYC--GTANNAGAILVLGRDLV 945 (998)
Q Consensus 912 ~~~~~~~iTvfSa~~y~--~~~~n~ga~l~~~~~~~ 945 (998)
.. + ..|| |.--..++++.++.+..
T Consensus 204 i~--~--------~~yi~lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 204 IP--G--------ITYINLGDWVSEGSILEVDDGGL 229 (237)
T ss_pred CC--C--------ceEEecCcchhcceEEEEecCcE
Confidence 32 2 1222 22234678888877653
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=94.96 E-value=1.3 Score=49.02 Aligned_cols=114 Identities=14% Similarity=0.218 Sum_probs=71.6
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec--CCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPG 224 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~--g~~ 224 (998)
....+..||..+.+|..+... -..-. +++... +++||+.|-..-.+.....+-.||..+.+ |+.+... ..+
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~---i~G~V-~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~--w~~~~~~~s~~i 87 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNG---ISGTV-TDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT--WSSLGGGSSNSI 87 (281)
T ss_pred CCCEEEEEECCCCEeecCCCC---ceEEE-EEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe--eeecCCcccccC
Confidence 356888999999999988653 11111 333333 56888888665554345668899999875 9888742 345
Q ss_pred CCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEccc
Q 001901 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273 (998)
Q Consensus 225 P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~ 273 (998)
|.+-..-+....+...+++.|.... -..-+..||= . +|..+..
T Consensus 88 pgpv~a~~~~~~d~~~~~~aG~~~~--g~~~l~~~dG--s--~W~~i~~ 130 (281)
T PF12768_consen 88 PGPVTALTFISNDGSNFWVAGRSAN--GSTFLMKYDG--S--SWSSIGS 130 (281)
T ss_pred CCcEEEEEeeccCCceEEEeceecC--CCceEEEEcC--C--ceEeccc
Confidence 6664333332223336777776521 1345666754 5 8999876
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.051 Score=56.65 Aligned_cols=42 Identities=19% Similarity=0.369 Sum_probs=32.1
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCC----CcEEEeecCccc
Q 001901 733 DYLFLGDYVDRGQHS--LETITLLLALKVEYP----NNVHLIRGNHEA 774 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s--~evl~ll~~lk~~~p----~~v~llrGNHE~ 774 (998)
-+|||||++|.|+.+ .|.+..+..++..|. -.++.|.||||.
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDI 92 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDI 92 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCc
Confidence 589999999999853 346666666664433 368899999997
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.077 Score=55.22 Aligned_cols=65 Identities=18% Similarity=0.098 Sum_probs=39.8
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH-HHHHHHHHhhhcC---------------------C
Q 001901 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-ETITLLLALKVEY---------------------P 762 (998)
Q Consensus 705 DiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-evl~ll~~lk~~~---------------------p 762 (998)
|++|+=.=|.++++.+-....-. .++||||++|.|--+- |-......++..+ .
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd-----~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPD-----AVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGK 98 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCC-----EEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCC
Confidence 44666666777776653322111 6889999999875332 2234444443333 1
Q ss_pred CcEEEeecCccc
Q 001901 763 NNVHLIRGNHEA 774 (998)
Q Consensus 763 ~~v~llrGNHE~ 774 (998)
-.+++|.||||.
T Consensus 99 i~~i~V~GNHDI 110 (193)
T cd08164 99 TPLINIAGNHDV 110 (193)
T ss_pred ceEEEECCcccC
Confidence 357899999998
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.65 E-value=3.6 Score=43.58 Aligned_cols=205 Identities=19% Similarity=0.205 Sum_probs=115.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEecccc--CCCCChHHHHHH-HHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYV--DRGQHSLETITL-LLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyV--DRG~~s~evl~l-l~~lk~~~p~~v~llrGNHE~ 774 (998)
.++..+.||||.++.+.++++.+.....+ -+++-||+. ++|+.-.-.... +-.++. +-..|+.+.||.|.
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D------~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~ 76 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRAD------LLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDP 76 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCC------EEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCCh
Confidence 57899999999999999999887644333 678899999 887753222211 333332 23579999999887
Q ss_pred cchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccCcc-c-----CHHhhhhccCCcccCC
Q 001901 775 ADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI-N-----HVEQIENLQRPITMEA 848 (998)
Q Consensus 775 ~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~~~-~-----~~~~i~~i~rp~~~~~ 848 (998)
..+-.. .+..+. .+.. -...+++--||-=||..+.- . +-++|....+-.....
T Consensus 77 ~~v~~~-------l~~~~~----~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~ 135 (226)
T COG2129 77 PEVIDV-------LKNAGV----NVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKA 135 (226)
T ss_pred HHHHHH-------HHhccc----cccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcc
Confidence 544221 111211 1111 11234444455557776542 1 2344544333211111
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEecccccc
Q 001901 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYC 928 (998)
Q Consensus 849 ~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~ 928 (998)
.+..-.=++-+-|.. ...+ ++-| ..--|..++++++++.+-.+.|.||==...|++.-- =||+-.|.-.
T Consensus 136 ~~~~~Il~~HaPP~g-t~~d----~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG----~TivVNPG~~ 204 (226)
T COG2129 136 DNPVNILLTHAPPYG-TLLD----TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIG----NTIVVNPGPL 204 (226)
T ss_pred cCcceEEEecCCCCC-cccc----CCCC--ccccchHHHHHHHHHhCCceEEEeeecccccccccC----CeEEECCCCc
Confidence 110001112233332 1111 2333 123489999999999999999999865567776431 2667666543
Q ss_pred CCCCCeEEEEEEcCC
Q 001901 929 GTANNAGAILVLGRD 943 (998)
Q Consensus 929 ~~~~n~ga~l~~~~~ 943 (998)
+ .-..|++.+++.
T Consensus 205 ~--~g~yA~i~l~~~ 217 (226)
T COG2129 205 G--EGRYALIELEKE 217 (226)
T ss_pred c--CceEEEEEecCc
Confidence 2 235688888777
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.08 Score=54.32 Aligned_cols=43 Identities=28% Similarity=0.342 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCCh--HH---HHHHHHHhhhcC-----CCcEEEeecCcccc
Q 001901 733 DYLFLGDYVDRGQHS--LE---TITLLLALKVEY-----PNNVHLIRGNHEAA 775 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s--~e---vl~ll~~lk~~~-----p~~v~llrGNHE~~ 775 (998)
.+|||||++|.+... .+ .+..+..+.... .-.+++|.||||..
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 699999999988743 22 232232322111 34699999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.1 Score=52.18 Aligned_cols=68 Identities=18% Similarity=0.356 Sum_probs=49.3
Q ss_pred EEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcc
Q 001901 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (998)
Q Consensus 701 ~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 773 (998)
.|+||+||+++.+..-++...-. .+. ..-+|++||+..-.... +-+.-++.=+++.|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k--~gp--Fd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKK--KGP--FDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcc--cCC--eeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC
Confidence 48999999999998887775321 121 22588899999866555 3444444556678889999999998
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=94.10 E-value=1.2 Score=50.95 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=73.6
Q ss_pred ECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC------ccc
Q 001901 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP------LAS 309 (998)
Q Consensus 236 ~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~------~~d 309 (998)
+.+.+|+..+.. ....+||..+. .=. ..+..+.+...- .++..+++||+.......... .-+
T Consensus 74 l~gskIv~~d~~------~~t~vyDt~t~--av~---~~P~l~~pk~~p-isv~VG~~LY~m~~~~~~~~~~~~~~~~FE 141 (342)
T PF07893_consen 74 LHGSKIVAVDQS------GRTLVYDTDTR--AVA---TGPRLHSPKRCP-ISVSVGDKLYAMDRSPFPEPAGRPDFPCFE 141 (342)
T ss_pred ecCCeEEEEcCC------CCeEEEECCCC--eEe---ccCCCCCCCcce-EEEEeCCeEEEeeccCccccccCccceeEE
Confidence 333478888654 34789999887 333 333333334444 444458889999876433211 222
Q ss_pred EEEEec-----CCCCeEEEEECCCCCCCCcc-------eeEEEEE-CCEEEEE-cccCCCCCccccCCeEEEEECCCCeE
Q 001901 310 AYGLAK-----HRDGRWEWAIAPGVSPSPRY-------QHAAVFV-NARLHVS-GGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 310 v~~~~~-----~~~~~W~w~~~~g~~P~pR~-------~hsav~~-~~~L~V~-GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
++.|.. .....|.|...++ +|..+. -.+-+++ +..|||. -|.. .-.|.||+++.+|
T Consensus 142 ~l~~~~~~~~~~~~~~w~W~~LP~-PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~---------~GTysfDt~~~~W 211 (342)
T PF07893_consen 142 ALVYRPPPDDPSPEESWSWRSLPP-PPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR---------WGTYSFDTESHEW 211 (342)
T ss_pred EeccccccccccCCCcceEEcCCC-CCccccCCcccceEEEEEEecCCeEEEEecCCc---------eEEEEEEcCCcce
Confidence 333332 3456899999876 344432 2344555 6678883 2211 2389999999999
Q ss_pred EEcccC
Q 001901 376 CDTKSV 381 (998)
Q Consensus 376 ~~v~~~ 381 (998)
+++..-
T Consensus 212 ~~~GdW 217 (342)
T PF07893_consen 212 RKHGDW 217 (342)
T ss_pred eeccce
Confidence 998655
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.17 Score=56.26 Aligned_cols=71 Identities=25% Similarity=0.270 Sum_probs=45.9
Q ss_pred CCeEEEecCCCCHHH--HHHHHHHcCCCCCCCCccceeEEEeccccCC-CCCh-HHHHHHHHHhhhcCCCcEEEeecCcc
Q 001901 698 APIKIFGDLHGQFGD--LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR-GQHS-LETITLLLALKVEYPNNVHLIRGNHE 773 (998)
Q Consensus 698 ~~i~vvGDiHG~~~d--L~~il~~~g~~~~~~~~~~~~~vfLGDyVDR-G~~s-~evl~ll~~lk~~~p~~v~llrGNHE 773 (998)
.+|+-+.|+|-.... ..+.+........+ -+++.|||+|+ .+.. -.++..|..|+. |-.+|.+.||||
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~D------livltGD~~~~~~~~~~~~~~~~L~~L~~--~~gv~av~GNHd 116 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPD------LIVLTGDYVDGDRPPGVAALALFLAKLKA--PLGVFAVLGNHD 116 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCC------EEEEEeeeecCCCCCCHHHHHHHHHhhhc--cCCEEEEecccc
Confidence 458999999987554 22223222221112 68999999996 5444 445566666654 457999999998
Q ss_pred ccc
Q 001901 774 AAD 776 (998)
Q Consensus 774 ~~~ 776 (998)
...
T Consensus 117 ~~~ 119 (284)
T COG1408 117 YGV 119 (284)
T ss_pred ccc
Confidence 743
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.25 Score=52.78 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=46.1
Q ss_pred Ceeee-cCCeEEEecCCCCHHHH----------------HHHHHHc--CCCCCCCCccceeEEEeccccCCCCC-----h
Q 001901 692 SVLQL-KAPIKIFGDLHGQFGDL----------------MRLFDEY--GSPSTAGDIAYIDYLFLGDYVDRGQH-----S 747 (998)
Q Consensus 692 ~~l~~-~~~i~vvGDiHG~~~dL----------------~~il~~~--g~~~~~~~~~~~~~vfLGDyVDRG~~-----s 747 (998)
..+.+ ...+.||.|+|==|+.- .+.+..+ .+.+ + ++|+|||+-.-... .
T Consensus 13 ~~~~l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p-~------~lIilGD~KH~~~~~~~~e~ 85 (235)
T COG1407 13 GVLYLPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGP-K------RLIILGDLKHEFGKSLRQEK 85 (235)
T ss_pred ceeEeccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCC-C------EEEEcCccccccCccccccH
Confidence 34444 47899999999544332 2222211 1111 1 79999999964433 3
Q ss_pred HHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 748 LETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 748 ~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.|+..++-.++.. .++++|||||...-
T Consensus 86 ~~~~~f~~~~~~~---evi~i~GNHD~~i~ 112 (235)
T COG1407 86 EEVREFLELLDER---EVIIIRGNHDNGIE 112 (235)
T ss_pred HHHHHHHHHhccC---cEEEEeccCCCccc
Confidence 5555555555443 59999999998443
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.2 Score=54.62 Aligned_cols=66 Identities=33% Similarity=0.353 Sum_probs=42.0
Q ss_pred CeEEEecCCCCH---------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH-----HHHHHHHHhhhcCCCc
Q 001901 699 PIKIFGDLHGQF---------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-----ETITLLLALKVEYPNN 764 (998)
Q Consensus 699 ~i~vvGDiHG~~---------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-----evl~ll~~lk~~~p~~ 764 (998)
.|+.++|+||.+ ..|.++++...-...+ .-+|..||+++....+- .++..|-++. -
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~-----~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g-----~ 71 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENEN-----TLLLDAGDNFDGSPPSTATKGEANIELMNALG-----Y 71 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCC-----eEEEeCCccCCCccchhccCCcHHHHHHHhcC-----C
Confidence 478899999887 4566666665432111 14577999999887643 4444444432 2
Q ss_pred EEEeecCccc
Q 001901 765 VHLIRGNHEA 774 (998)
Q Consensus 765 v~llrGNHE~ 774 (998)
.++..||||.
T Consensus 72 d~~~~GNHe~ 81 (252)
T cd00845 72 DAVTIGNHEF 81 (252)
T ss_pred CEEeeccccc
Confidence 3345699996
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=92.65 E-value=21 Score=43.08 Aligned_cols=113 Identities=16% Similarity=0.173 Sum_probs=60.9
Q ss_pred cEEEEECCCCc--EEEecCCC-CCCCCc-cceEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFG-EPPTPR-AAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g-~~P~pR-~~hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
.++.+|..+.+ |+.-.... ....+. .....++.+ ++||+... ...++.+|..+....|+.-......+
T Consensus 72 ~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~-------~g~v~AlD~~TG~~~W~~~~~~~~~~ 144 (488)
T cd00216 72 ALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTF-------DGRLVALDAETGKQVWKFGNNDQVPP 144 (488)
T ss_pred cEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecC-------CCeEEEEECCCCCEeeeecCCCCcCc
Confidence 67889988764 87643221 001111 112234445 67776432 24799999998766788643110000
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCC----CCcccEEEEECCCCCceEEEcc
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGK----RPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~----~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.-....+.++.++ .+| +|..++. .....++.||..+....|+.-.
T Consensus 145 ~~~i~ssP~v~~~-~v~-vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~ 193 (488)
T cd00216 145 GYTMTGAPTIVKK-LVI-IGSSGAEFFACGVRGALRAYDVETGKLLWRFYT 193 (488)
T ss_pred ceEecCCCEEECC-EEE-EeccccccccCCCCcEEEEEECCCCceeeEeec
Confidence 0012233344554 444 4433222 2246799999999888897643
|
The alignment model contains an 8-bladed beta-propeller. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=91.79 E-value=30 Score=42.12 Aligned_cols=111 Identities=15% Similarity=0.107 Sum_probs=61.8
Q ss_pred cEEEEECCCC--cEEEecCCCC--CC---CCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTN--KWSRITPFGE--PP---TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~--~W~~l~~~g~--~P---~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.++.+|..+. .|+.-..... .+ ......+.++.+++||+... ...++.+|..+....|..-. +.
T Consensus 80 ~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~-------dg~l~ALDa~TGk~~W~~~~--~~ 150 (527)
T TIGR03075 80 RVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTL-------DARLVALDAKTGKVVWSKKN--GD 150 (527)
T ss_pred cEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcC-------CCEEEEEECCCCCEEeeccc--cc
Confidence 6888898875 4875432210 00 01122334556778776432 24699999998776787643 11
Q ss_pred CCCC-CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 224 GPGP-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 224 ~P~~-R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.... ....+-++.++ .+|+.........-..+..||.++....|+.-
T Consensus 151 ~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 151 YKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred ccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 1111 12233345555 56664322222234579999999998788754
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=91.31 E-value=4.6 Score=46.25 Aligned_cols=111 Identities=19% Similarity=0.273 Sum_probs=67.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCc----ccEEEE--E------cCCCCCceEEe
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSA----EDLHVL--D------LTQQRPRWHRV 218 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~----~dv~~~--D------l~t~t~~W~~l 218 (998)
.+.+||..+..-..++.+ +.+...-.++.++++||+........... ...+.+ + .....|.|..+
T Consensus 87 ~t~vyDt~t~av~~~P~l---~~pk~~pisv~VG~~LY~m~~~~~~~~~~~~~~~~FE~l~~~~~~~~~~~~~~w~W~~L 163 (342)
T PF07893_consen 87 RTLVYDTDTRAVATGPRL---HSPKRCPISVSVGDKLYAMDRSPFPEPAGRPDFPCFEALVYRPPPDDPSPEESWSWRSL 163 (342)
T ss_pred CeEEEECCCCeEeccCCC---CCCCcceEEEEeCCeEEEeeccCccccccCccceeEEEeccccccccccCCCcceEEcC
Confidence 467899999887765554 45555567778899999998753221110 033333 3 22345778888
Q ss_pred eecCCCCCCCcc-------cEEEEECCcEEEE-EcCCCCCCCcccEEEEECCCCCceEEEcccC
Q 001901 219 VVQGPGPGPRYG-------HVMALVGQRYLMA-IGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (998)
Q Consensus 219 ~~~g~~P~~R~~-------hs~~~~~~~~Lyv-~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~ 274 (998)
+ +.|-.+.. .+-+++++..|+| .-|.. .-.+.||+.+. +|+++..-
T Consensus 164 P---~PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~-----~GTysfDt~~~--~W~~~GdW 217 (342)
T PF07893_consen 164 P---PPPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR-----WGTYSFDTESH--EWRKHGDW 217 (342)
T ss_pred C---CCCccccCCcccceEEEEEEecCCeEEEEecCCc-----eEEEEEEcCCc--ceeeccce
Confidence 6 44433332 2223344557777 33321 24799999999 99998543
|
|
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.23 Score=59.28 Aligned_cols=70 Identities=20% Similarity=0.222 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHcCCc----EEEEcccccc--cceE-EecCCeEEEE---eccccccCCCCCeEEEEEEcCCceEEeEEec
Q 001901 883 GPDRVMEFCNNNDLQ----LIVRAHECVM--DGFE-RFAQGHLITL---FSATNYCGTANNAGAILVLGRDLVVVPKLIH 952 (998)
Q Consensus 883 g~~~~~~fl~~~~l~----~iiR~H~~~~--~G~~-~~~~~~~iTv---fSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~ 952 (998)
.++..++.|+..||+ .||-||.+|. .|=. ..++||++.| ||.. |..+.+ -|++-+|.+...+....-+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TG-IAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTG-IAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccC-ccceEEEecCCcceeccCC
Confidence 577788899999998 9999999997 5643 4689999999 7754 443332 3455555454444444445
Q ss_pred cC
Q 001901 953 PL 954 (998)
Q Consensus 953 ~~ 954 (998)
|.
T Consensus 585 pF 586 (640)
T PF06874_consen 585 PF 586 (640)
T ss_pred CC
Confidence 43
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=90.32 E-value=45 Score=39.46 Aligned_cols=192 Identities=13% Similarity=0.069 Sum_probs=86.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
...+|+.|.....=+.+.... .+ ..+-...-+ ++|++..-. . + ...+|++|+.+.. ...+. ..+..
T Consensus 181 ~~~l~~~d~dg~~~~~lt~~~---~~-v~~p~wSpDG~~lay~s~~-~-g--~~~i~~~dl~~g~--~~~l~---~~~g~ 247 (435)
T PRK05137 181 IKRLAIMDQDGANVRYLTDGS---SL-VLTPRFSPNRQEITYMSYA-N-G--RPRVYLLDLETGQ--RELVG---NFPGM 247 (435)
T ss_pred ceEEEEECCCCCCcEEEecCC---CC-eEeeEECCCCCEEEEEEec-C-C--CCEEEEEECCCCc--EEEee---cCCCc
Confidence 457888887654434443221 11 111111113 344443321 1 1 2579999998763 55554 22221
Q ss_pred CcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001901 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (998)
Q Consensus 228 R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~ 306 (998)
-. +...- ++++|++....++ ..++|.+|+.+. ....+..... .........+++-++|..... +
T Consensus 248 ~~--~~~~SPDG~~la~~~~~~g---~~~Iy~~d~~~~--~~~~Lt~~~~-----~~~~~~~spDG~~i~f~s~~~-g-- 312 (435)
T PRK05137 248 TF--APRFSPDGRKVVMSLSQGG---NTDIYTMDLRSG--TTTRLTDSPA-----IDTSPSYSPDGSQIVFESDRS-G-- 312 (435)
T ss_pred cc--CcEECCCCCEEEEEEecCC---CceEEEEECCCC--ceEEccCCCC-----ccCceeEcCCCCEEEEEECCC-C--
Confidence 11 12222 2324544433333 258999999888 6666644221 111223334555444443211 1
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 307 ~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
...+|.++.... ..+..... ..+.......-+++.+++...... ...++++|+.+..+..+.
T Consensus 313 ~~~Iy~~d~~g~-~~~~lt~~----~~~~~~~~~SpdG~~ia~~~~~~~------~~~i~~~d~~~~~~~~lt 374 (435)
T PRK05137 313 SPQLYVMNADGS-NPRRISFG----GGRYSTPVWSPRGDLIAFTKQGGG------QFSIGVMKPDGSGERILT 374 (435)
T ss_pred CCeEEEEECCCC-CeEEeecC----CCcccCeEECCCCCEEEEEEcCCC------ceEEEEEECCCCceEecc
Confidence 246777765432 22222111 111212222234544444332211 246899998777665543
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=89.98 E-value=0.39 Score=50.56 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=44.1
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH-------------------------HHHH
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-------------------------ETIT 752 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-------------------------evl~ 752 (998)
..|..+.|.||+++.|.++.+.+.-...+ -+||+||++-....+- |.|.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D------~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPD------AVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-S------EEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCC------EEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 46899999999999999998876433222 6999999997554333 3344
Q ss_pred HHHHhhhcCCCcEEEeecCccccch
Q 001901 753 LLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 753 ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
-+|..--..+--+++|.||||....
T Consensus 80 ~ff~~L~~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 80 KFFRILGELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HHHHHHHCC-SEEEEE--TTS-SHH
T ss_pred HHHHHHHhcCCcEEEecCCCCchHH
Confidence 4444444556689999999998543
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.48 Score=55.93 Aligned_cols=25 Identities=8% Similarity=0.214 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCcEEEEccccccc
Q 001901 884 PDRVMEFCNNNDLQLIVRAHECVMD 908 (998)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~ 908 (998)
.+.++.+|+++++++++-||.-.-+
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceeccc
Confidence 4578889999999999999986533
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.39 E-value=1.5 Score=43.41 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
.+.+|||+.-.-..--+..+++-+| +.+++|++||||--.
T Consensus 48 ~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 48 VLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred eEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 6889999986544434444444443 688999999999743
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=88.84 E-value=62 Score=39.02 Aligned_cols=119 Identities=17% Similarity=0.179 Sum_probs=61.2
Q ss_pred cCCcEEEEECCCCc--EEEecCCCCCCC---------------CccceEEEEe--CCEEEEEeCCCC-----------CC
Q 001901 148 ATADVHCYDVLTNK--WSRITPFGEPPT---------------PRAAHVATAV--GTMVVIQGGIGP-----------AG 197 (998)
Q Consensus 148 ~~~dv~~yD~~t~~--W~~l~~~g~~P~---------------pR~~hsa~~~--~~~lyVfGG~~~-----------~~ 197 (998)
....++.||..|.+ |+.-.....+.. +....+.++. ++.||+-.|... ..
T Consensus 173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~ 252 (488)
T cd00216 173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDN 252 (488)
T ss_pred CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCC
Confidence 34678999998764 875432211111 1111222332 356666544220 12
Q ss_pred CCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEE-----ECCc--EEEEEcCCCCCCCcccEEEEECCCCCceEEE
Q 001901 198 LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL-----VGQR--YLMAIGGNDGKRPLADVWALDTAAKPYEWRK 270 (998)
Q Consensus 198 ~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~-----~~~~--~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~ 270 (998)
...+.++.+|..+....|..-....+...-+.....++ +.+. .++++|..++ .++.||..+....|+.
T Consensus 253 ~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G-----~l~ald~~tG~~~W~~ 327 (488)
T cd00216 253 LYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNG-----FFYVLDRTTGKLISAR 327 (488)
T ss_pred CceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCc-----eEEEEECCCCcEeeEe
Confidence 23457999999998778986431111100011111111 1121 2445555443 5899999999888986
Q ss_pred c
Q 001901 271 L 271 (998)
Q Consensus 271 v 271 (998)
-
T Consensus 328 ~ 328 (488)
T cd00216 328 P 328 (488)
T ss_pred E
Confidence 4
|
The alignment model contains an 8-bladed beta-propeller. |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=88.59 E-value=0.67 Score=51.34 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=15.0
Q ss_pred HHHHHHH-cCCcEEEEccccc
Q 001901 887 VMEFCNN-NDLQLIVRAHECV 906 (998)
Q Consensus 887 ~~~fl~~-~~l~~iiR~H~~~ 906 (998)
..+++++ -++++||-||+-+
T Consensus 209 ~~~la~~~~~vD~IlgGHsH~ 229 (277)
T cd07410 209 AYELAEEVPGIDAILTGHQHR 229 (277)
T ss_pred HHHHHhcCCCCcEEEeCCCcc
Confidence 4566666 6899999999854
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=88.29 E-value=0.84 Score=52.54 Aligned_cols=57 Identities=32% Similarity=0.354 Sum_probs=38.5
Q ss_pred HHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCC----cEEEeecCccc
Q 001901 713 LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPN----NVHLIRGNHEA 774 (998)
Q Consensus 713 L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~p~----~v~llrGNHE~ 774 (998)
|.+.|...-+....+ -.+|||||+|-|... -|--.....+|..|+. .++.+.||||-
T Consensus 81 lrr~f~~~~~~lkPd-----vvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPD-----VVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCC-----EEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 455555543332221 578899999988753 4555666666666665 78999999997
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.18 E-value=32 Score=40.14 Aligned_cols=68 Identities=19% Similarity=0.284 Sum_probs=41.7
Q ss_pred EeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEEC
Q 001901 182 AVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 182 ~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
..++.++++|+-+ .-+-.+|+.+. ..+....|..-.-|++... ..+ ++|++-||+|+. +-.||+
T Consensus 120 ~~d~t~l~s~sDd------~v~k~~d~s~a---~v~~~l~~htDYVR~g~~~-~~~-~hivvtGsYDg~-----vrl~Dt 183 (487)
T KOG0310|consen 120 PQDNTMLVSGSDD------KVVKYWDLSTA---YVQAELSGHTDYVRCGDIS-PAN-DHIVVTGSYDGK-----VRLWDT 183 (487)
T ss_pred ccCCeEEEecCCC------ceEEEEEcCCc---EEEEEecCCcceeEeeccc-cCC-CeEEEecCCCce-----EEEEEe
Confidence 3578999998742 23555677665 3344445554445554332 223 489999999984 556777
Q ss_pred CCCC
Q 001901 262 AAKP 265 (998)
Q Consensus 262 ~s~~ 265 (998)
.+.+
T Consensus 184 R~~~ 187 (487)
T KOG0310|consen 184 RSLT 187 (487)
T ss_pred ccCC
Confidence 6663
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=86.60 E-value=12 Score=43.99 Aligned_cols=189 Identities=19% Similarity=0.206 Sum_probs=98.4
Q ss_pred CeEEEecCCC-CH----HHHHHHHHHcCCCCCCCCccceeEEE-eccccCC-CC-----------ChHHHHHHHHHhhhc
Q 001901 699 PIKIFGDLHG-QF----GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDR-GQ-----------HSLETITLLLALKVE 760 (998)
Q Consensus 699 ~i~vvGDiHG-~~----~dL~~il~~~g~~~~~~~~~~~~~vf-LGDyVDR-G~-----------~s~evl~ll~~lk~~ 760 (998)
.+.+++|+|= .- +.+.++++.++-+.. --...+|+. -||.||- |- +-.|-...+-.+--.
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~--~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~ 304 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGD--LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ 304 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcc--cccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence 4788999995 22 334444444443321 112336665 6799993 21 223334444444444
Q ss_pred CCC--cEEEeecCccccchhhhc-CChHHHHHHhCCCcchhhhhhhhhhhcccceeEEEc-CeEEEecCCccCcccCHHh
Q 001901 761 YPN--NVHLIRGNHEAADINALF-GFRIECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSINHVEQ 836 (998)
Q Consensus 761 ~p~--~v~llrGNHE~~~~~~~~-gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~-~~il~vHgGi~~~~~~~~~ 836 (998)
-|. .|++..||||........ .|.......| ...+-.|=.=|...-++ ..+|..|| .+++|
T Consensus 305 vp~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf---------~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidD 369 (481)
T COG1311 305 VPEHIKVFIMPGNHDAVRQALPQPHFPELIKSLF---------SLNNLLFVSNPALVSLHGVDVLIYHG------RSIDD 369 (481)
T ss_pred CCCCceEEEecCCCCccccccCCCCcchhhcccc---------cccceEecCCCcEEEECCEEEEEecC------CCHHH
Confidence 555 689999999986554332 3333322222 22221111114333333 46777887 35566
Q ss_pred hhhccCCcccCCCC-------------cceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcc
Q 001901 837 IENLQRPITMEAGS-------------IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAH 903 (998)
Q Consensus 837 i~~i~rp~~~~~~~-------------~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H 903 (998)
|...-.......-. ...-+-+|.-|...| +| ++++ --++++-||
T Consensus 370 ii~~vP~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD---------------~l---VIee-----vPDv~~~Gh 426 (481)
T COG1311 370 IIKLVPGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKD---------------YL---VIEE-----VPDVFHTGH 426 (481)
T ss_pred HHhhCCCCCccchHHHHHHHHHhcccCCCCCCccccccCCcC---------------ce---eecc-----CCcEEEEcc
Confidence 54433222211100 123344555554321 01 0111 145678899
Q ss_pred cccccceEEecCCeEEEEecccccc
Q 001901 904 ECVMDGFERFAQGHLITLFSATNYC 928 (998)
Q Consensus 904 ~~~~~G~~~~~~~~~iTvfSa~~y~ 928 (998)
+.. .|+..+.+.++|..++-+.+.
T Consensus 427 vh~-~g~~~y~gv~~vns~T~q~qT 450 (481)
T COG1311 427 VHK-FGTGVYEGVNLVNSGTWQEQT 450 (481)
T ss_pred ccc-cceeEEeccceEEeeeecchh
Confidence 976 899998888898888877654
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=86.48 E-value=1.6 Score=50.85 Aligned_cols=45 Identities=27% Similarity=0.327 Sum_probs=34.2
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCC---CcEEEeecCccccch
Q 001901 733 DYLFLGDYVDRGQHSLETITLLLALKVEYP---NNVHLIRGNHEAADI 777 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~p---~~v~llrGNHE~~~~ 777 (998)
-+|+-||+.|+..-|.+++.++...-.+.- -.||+|.||||...-
T Consensus 43 ~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 43 FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred EEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 588899999999988888766555443332 279999999998643
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=85.08 E-value=89 Score=36.95 Aligned_cols=149 Identities=17% Similarity=0.127 Sum_probs=72.3
Q ss_pred ccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCC
Q 001901 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (998)
Q Consensus 201 ~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~ 279 (998)
..+|++|+.+.. -..+. ..+.. ......- ++++|++....++. .++|.+|+.+. +.+++.....
T Consensus 223 ~~i~i~dl~~G~--~~~l~---~~~~~--~~~~~~SPDG~~La~~~~~~g~---~~I~~~d~~tg--~~~~lt~~~~--- 287 (429)
T PRK03629 223 SALVIQTLANGA--VRQVA---SFPRH--NGAPAFSPDGSKLAFALSKTGS---LNLYVMDLASG--QIRQVTDGRS--- 287 (429)
T ss_pred cEEEEEECCCCC--eEEcc---CCCCC--cCCeEECCCCCEEEEEEcCCCC---cEEEEEECCCC--CEEEccCCCC---
Confidence 579999987752 33333 22211 1112222 33355554333332 36999999887 6666644321
Q ss_pred CccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCcc
Q 001901 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359 (998)
Q Consensus 280 ~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~ 359 (998)
.........+++.++|...... ...+|.++.... ........+ .........-+++.+++.+....
T Consensus 288 --~~~~~~wSPDG~~I~f~s~~~g---~~~Iy~~d~~~g-~~~~lt~~~----~~~~~~~~SpDG~~Ia~~~~~~g---- 353 (429)
T PRK03629 288 --NNTEPTWFPDSQNLAYTSDQAG---RPQVYKVNINGG-APQRITWEG----SQNQDADVSSDGKFMVMVSSNGG---- 353 (429)
T ss_pred --CcCceEECCCCCEEEEEeCCCC---CceEEEEECCCC-CeEEeecCC----CCccCEEECCCCCEEEEEEccCC----
Confidence 1122233345655555432211 236777765543 222221111 11111222234554444433221
Q ss_pred ccCCeEEEEECCCCeEEEccc
Q 001901 360 EDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 360 ~~~~dv~vyD~~t~~W~~v~~ 380 (998)
...++++|+.+.+++.+..
T Consensus 354 --~~~I~~~dl~~g~~~~Lt~ 372 (429)
T PRK03629 354 --QQHIAKQDLATGGVQVLTD 372 (429)
T ss_pred --CceEEEEECCCCCeEEeCC
Confidence 2469999999999887663
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=84.16 E-value=2 Score=47.37 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEccccc
Q 001901 884 PDRVMEFCNNNDLQLIVRAHECV 906 (998)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~ 906 (998)
...+.++++++++++++-||.-.
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~ 212 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHN 212 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCccc
Confidence 45678899999999999999754
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.82 E-value=48 Score=38.58 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=75.4
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
|...++++|.. .=+|.||+.+. +-+++.+...++..-...-.+...+ .++++-|..| -++.+...|
T Consensus 269 G~~~i~~s~rr------ky~ysyDle~a--k~~k~~~~~g~e~~~~e~FeVShd~-~fia~~G~~G-----~I~lLhakT 334 (514)
T KOG2055|consen 269 GHSVIFTSGRR------KYLYSYDLETA--KVTKLKPPYGVEEKSMERFEVSHDS-NFIAIAGNNG-----HIHLLHAKT 334 (514)
T ss_pred CceEEEecccc------eEEEEeecccc--ccccccCCCCcccchhheeEecCCC-CeEEEcccCc-----eEEeehhhh
Confidence 34588888853 34889999886 4666653333332111111222333 4777777655 455666666
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC-eEEEEECCCCCCCCcceeE-EEE
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG-RWEWAIAPGVSPSPRYQHA-AVF 341 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~-~W~w~~~~g~~P~pR~~hs-av~ 341 (998)
. .|..---. ..+....+....+.+||+.||. ..+|.++...+. .-+|..-.+. .+-+ |..
T Consensus 335 ~--eli~s~Ki----eG~v~~~~fsSdsk~l~~~~~~-------GeV~v~nl~~~~~~~rf~D~G~v-----~gts~~~S 396 (514)
T KOG2055|consen 335 K--ELITSFKI----EGVVSDFTFSSDSKELLASGGT-------GEVYVWNLRQNSCLHRFVDDGSV-----HGTSLCIS 396 (514)
T ss_pred h--hhhheeee----ccEEeeEEEecCCcEEEEEcCC-------ceEEEEecCCcceEEEEeecCcc-----ceeeeeec
Confidence 6 55321111 1123333333445678888774 357777665542 2234443322 2222 334
Q ss_pred ECCEEEEEcccCCCCCccccCCeEEEEECCC
Q 001901 342 VNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (998)
Q Consensus 342 ~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t 372 (998)
.++.++.+|... .-|-+||..+
T Consensus 397 ~ng~ylA~GS~~---------GiVNIYd~~s 418 (514)
T KOG2055|consen 397 LNGSYLATGSDS---------GIVNIYDGNS 418 (514)
T ss_pred CCCceEEeccCc---------ceEEEeccch
Confidence 566766666432 2366777544
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=82.92 E-value=1.8 Score=48.41 Aligned_cols=66 Identities=29% Similarity=0.364 Sum_probs=41.0
Q ss_pred CeEEEecCCCCHHH--------------HHHHHHHcCCCCCCCCccceeEEEeccccCCCCC-h-----HHHHHHHHHhh
Q 001901 699 PIKIFGDLHGQFGD--------------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-S-----LETITLLLALK 758 (998)
Q Consensus 699 ~i~vvGDiHG~~~d--------------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s-----~evl~ll~~lk 758 (998)
.|+.+.|+||++.. |..+++....... ..-+|..||++...+. + -.++.+|-++.
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~-----~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g 76 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNP-----NSLFVSAGDLIGASPFESALLQDEPTIEALNAMG 76 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCC-----CeEEEeCCcccccccchhhcccCCcHHHHHHhhC
Confidence 47789999998653 5566666543211 1257779999986553 2 24455555553
Q ss_pred hcCCCcEEEeecCccc
Q 001901 759 VEYPNNVHLIRGNHEA 774 (998)
Q Consensus 759 ~~~p~~v~llrGNHE~ 774 (998)
. . .+..||||.
T Consensus 77 ~----D-a~t~GNHef 87 (288)
T cd07412 77 V----D-ASAVGNHEF 87 (288)
T ss_pred C----e-eeeeccccc
Confidence 2 2 455699996
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=82.73 E-value=38 Score=37.17 Aligned_cols=47 Identities=15% Similarity=0.231 Sum_probs=27.1
Q ss_pred EEEEcccccccceEEecC--CeEEEEeccccccCCCCCeEEEEEE-cCCceEEeE
Q 001901 898 LIVRAHECVMDGFERFAQ--GHLITLFSATNYCGTANNAGAILVL-GRDLVVVPK 949 (998)
Q Consensus 898 ~iiR~H~~~~~G~~~~~~--~~~iTvfSa~~y~~~~~n~ga~l~~-~~~~~~~~~ 949 (998)
.++-|||.. -|.+.+.+ ++-+.+.|.|.|.. .|.++++ =+++++.+.
T Consensus 206 Vyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 206 VYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPI 255 (257)
T ss_pred EEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEE
Confidence 344678865 55555432 56677777788753 3444444 445666543
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=82.45 E-value=1.2e+02 Score=36.25 Aligned_cols=191 Identities=14% Similarity=0.126 Sum_probs=90.8
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
...++..|.....-+.+.... .+ .......-+ ++|++.- .. .+ ..++|++|+.+.. -..+. ..+..
T Consensus 197 ~~~l~i~d~dG~~~~~l~~~~---~~-~~~p~wSPDG~~La~~s-~~-~g--~~~L~~~dl~tg~--~~~lt---~~~g~ 263 (448)
T PRK04792 197 PYQLMIADYDGYNEQMLLRSP---EP-LMSPAWSPDGRKLAYVS-FE-NR--KAEIFVQDIYTQV--REKVT---SFPGI 263 (448)
T ss_pred ceEEEEEeCCCCCceEeecCC---Cc-ccCceECCCCCEEEEEE-ec-CC--CcEEEEEECCCCC--eEEec---CCCCC
Confidence 346777777665555444331 11 111111123 3444332 11 11 2579999998753 44443 22211
Q ss_pred CcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec-cCCCCC
Q 001901 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG-RDASSV 305 (998)
Q Consensus 228 R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG-~~~~~~ 305 (998)
......- ++++|++....++ ..++|.+|+.+. +.+++..... .........+++.++|.. .++
T Consensus 264 --~~~~~wSPDG~~La~~~~~~g---~~~Iy~~dl~tg--~~~~lt~~~~-----~~~~p~wSpDG~~I~f~s~~~g--- 328 (448)
T PRK04792 264 --NGAPRFSPDGKKLALVLSKDG---QPEIYVVDIATK--ALTRITRHRA-----IDTEPSWHPDGKSLIFTSERGG--- 328 (448)
T ss_pred --cCCeeECCCCCEEEEEEeCCC---CeEEEEEECCCC--CeEECccCCC-----CccceEECCCCCEEEEEECCCC---
Confidence 1122222 3335655543333 258999999988 7777654321 111222333554444432 222
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
..++|.++.... .++.....+. .....+..-+++.+++.+.... ...++++|+.+.++..+.
T Consensus 329 -~~~Iy~~dl~~g-~~~~Lt~~g~----~~~~~~~SpDG~~l~~~~~~~g------~~~I~~~dl~~g~~~~lt 390 (448)
T PRK04792 329 -KPQIYRVNLASG-KVSRLTFEGE----QNLGGSITPDGRSMIMVNRTNG------KFNIARQDLETGAMQVLT 390 (448)
T ss_pred -CceEEEEECCCC-CEEEEecCCC----CCcCeeECCCCCEEEEEEecCC------ceEEEEEECCCCCeEEcc
Confidence 246777776543 4443332221 1111122234544444433221 346999999999887664
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=80.80 E-value=2.8 Score=45.91 Aligned_cols=65 Identities=23% Similarity=0.223 Sum_probs=38.4
Q ss_pred CeEEEecCCCCHH----------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh-----HHHHHHHHHhhhcCCC
Q 001901 699 PIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETITLLLALKVEYPN 763 (998)
Q Consensus 699 ~i~vvGDiHG~~~----------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl~ll~~lk~~~p~ 763 (998)
.|+-+.|+||++. .|..+++...-.+ ..-+|..||+++..+.+ ..++..|-.+. -
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~------~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~ 71 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLD------NDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----Y 71 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcC------CEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----C
Confidence 4677999999853 4556666653221 12577799999865533 22333333331 2
Q ss_pred cEEEeecCccc
Q 001901 764 NVHLIRGNHEA 774 (998)
Q Consensus 764 ~v~llrGNHE~ 774 (998)
.+ +..||||.
T Consensus 72 d~-~~~GNHef 81 (257)
T cd07408 72 DA-VTPGNHEF 81 (257)
T ss_pred cE-Eccccccc
Confidence 34 45699996
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 998 | ||||
| 2o8a_A | 329 | Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng | 2e-70 | ||
| 1jk7_A | 323 | Crystal Structure Of The Tumor-Promoter Okadaic Aci | 2e-70 | ||
| 1fjm_A | 330 | Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor | 1e-68 | ||
| 3v4y_A | 306 | Crystal Structure Of The First Nuclear Pp1 Holoenzy | 1e-68 | ||
| 3n5u_B | 300 | Crystal Structure Of An Rb C-Terminal Peptide Bound | 1e-68 | ||
| 3e7a_A | 299 | Crystal Structure Of Protein Phosphatase-1 Bound To | 1e-68 | ||
| 4g9j_A | 331 | Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P | 1e-68 | ||
| 1s70_A | 330 | Complex Between Protein Ser/thr Phosphatase-1 (delt | 4e-68 | ||
| 1u32_A | 293 | Crystal Structure Of A Protein Phosphatase-1: Calci | 2e-67 | ||
| 3egg_A | 329 | Crystal Structure Of A Complex Between Protein Phos | 3e-67 | ||
| 3c5w_C | 310 | Complex Between Pp2a-Specific Methylesterase Pme-1 | 2e-50 | ||
| 2ie4_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-50 | ||
| 2nyl_C | 293 | Crystal Structure Of Protein Phosphatase 2a (Pp2a) | 2e-50 | ||
| 2ie3_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-50 | ||
| 3p71_C | 304 | Crystal Structure Of The Complex Of Lcmt-1 And Pp2a | 2e-50 | ||
| 2iae_C | 309 | Crystal Structure Of A Protein Phosphatase 2a (Pp2a | 6e-50 | ||
| 3fga_C | 309 | Structural Basis Of Pp2a And Sgo Interaction Length | 7e-50 | ||
| 1aui_A | 521 | Human Calcineurin Heterodimer Length = 521 | 9e-42 | ||
| 2p6b_A | 383 | Crystal Structure Of Human Calcineurin In Complex W | 3e-41 | ||
| 1tco_A | 375 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 4e-41 | ||
| 1m63_A | 372 | Crystal Structure Of Calcineurin-Cyclophilin-Cyclos | 4e-41 | ||
| 1mf8_A | 373 | Crystal Structure Of Human Calcineurin Complexed Wi | 4e-41 | ||
| 3ll8_A | 357 | Crystal Structure Of Calcineurin In Complex With Ak | 5e-41 | ||
| 2jog_A | 327 | Structure Of The Calcineurin-Nfat Complex Length = | 5e-41 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 1e-38 | ||
| 3h60_A | 315 | Catalytic Domain Of Human SerineTHREONINE PHOSPHATA | 2e-38 | ||
| 1s95_A | 333 | Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 | 3e-38 | ||
| 3icf_A | 335 | Structure Of Protein SerineTHREONINE PHOSPHATASE FR | 8e-37 |
| >pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 | Back alignment and structure |
|
| >pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 | Back alignment and structure |
|
| >pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 | Back alignment and structure |
|
| >pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 | Back alignment and structure |
|
| >pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 | Back alignment and structure |
|
| >pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 | Back alignment and structure |
|
| >pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 | Back alignment and structure |
|
| >pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 | Back alignment and structure |
|
| >pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 | Back alignment and structure |
|
| >pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 | Back alignment and structure |
|
| >pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 | Back alignment and structure |
|
| >pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 | Back alignment and structure |
|
| >pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 | Back alignment and structure |
|
| >pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 | Back alignment and structure |
|
| >pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 | Back alignment and structure |
|
| >pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 | Back alignment and structure |
|
| >pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 | Back alignment and structure |
|
| >pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 | Back alignment and structure |
|
| >pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 | Back alignment and structure |
|
| >pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 | Back alignment and structure |
|
| >pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 | Back alignment and structure |
|
| >pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 | Back alignment and structure |
|
| >pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
| >pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 | Back alignment and structure |
|
| >pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 | Back alignment and structure |
|
| >pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 998 | |||
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 1e-145 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 1e-139 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 1e-120 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 1e-110 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 1e-109 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 1e-108 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 1e-105 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 1e-100 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 8e-30 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 9e-29 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 6e-27 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 3e-10 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 1e-25 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 5e-08 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 6e-07 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-24 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-19 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 3e-11 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 1e-23 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 1e-19 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 2e-15 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 6e-13 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 2e-23 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 1e-17 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 6e-16 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 1e-22 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 4e-15 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 3e-10 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 7e-06 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 8e-22 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 5e-16 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 7e-05 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 1e-19 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 5e-17 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 3e-13 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 3e-10 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 4e-05 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 4e-13 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 2e-12 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 5e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 3e-06 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 3e-06 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 3e-04 |
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 | Back alignment and structure |
|---|
Score = 433 bits (1116), Expect = e-145
Identities = 145/346 (41%), Positives = 202/346 (58%), Gaps = 27/346 (7%)
Query: 650 KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQ 709
+I LL+ +G +P Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ
Sbjct: 11 SIIGRLLEVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 68
Query: 710 FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIR 769
+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+R
Sbjct: 69 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 770 GNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829
GNHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 123 GNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 178
Query: 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + L DLLWSDP ++ V+G N RG TFG + V +
Sbjct: 179 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVAK 234
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 950 LIHPLPPAISSPETSPERHIEDTWMQELN-ANRPPTPTRGRPQNDR 994
++ P + + + LN RP TP R + +
Sbjct: 295 ILKP----------ADKNKGKYGQFSGLNPGGRPITPPRNSAKAKK 330
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-139
Identities = 138/305 (45%), Positives = 190/305 (62%), Gaps = 16/305 (5%)
Query: 650 KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQ 709
+I LL+ +G +P Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ
Sbjct: 10 SIIGRLLEVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 67
Query: 710 FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIR 769
+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+R
Sbjct: 68 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
Query: 770 GNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829
GNHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 122 GNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 177
Query: 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + L DLLWSDP ++ V+G N RG TFG + V +
Sbjct: 178 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVAK 233
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 234 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 293
Query: 950 LIHPL 954
++ P
Sbjct: 294 ILKPA 298
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 | Back alignment and structure |
|---|
Score = 368 bits (947), Expect = e-120
Identities = 113/299 (37%), Positives = 163/299 (54%), Gaps = 19/299 (6%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
+++ LC+ A+ I + E +V +++ P+ + GD+HGQF DLM LF G +
Sbjct: 26 SQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT------N 79
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGNHE+ I ++GF EC+ + G
Sbjct: 80 YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYG- 138
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-EAGSIV 852
W LF++LPL AL++ +I C+HGG+ SI+ ++ I L R + G
Sbjct: 139 --NANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG--P 194
Query: 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
+ DLLWSDP D G + RG G TFG D F + N L L+ RAH+ VM+G+
Sbjct: 195 MCDLLWSDP---DDRGGWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGYNW 250
Query: 913 FAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIED 971
+++T+FSA NYC N AI+ L L P P E R D
Sbjct: 251 CHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP---RRGEPHVTRRTPD 306
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-110
Identities = 102/331 (30%), Positives = 160/331 (48%), Gaps = 29/331 (8%)
Query: 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK------ 697
I ++ ++ I+ ++ + +L +A + A+ +F EPS+++L+
Sbjct: 9 IKNMSQEFISKMVNDL-----FLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPD 63
Query: 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL 757
I + GD HGQF D++ LF ++G YLF GD+VDRG S E L L
Sbjct: 64 VKISVCGDTHGQFYDVLNLFRKFGKVG-----PKHTYLFNGDFVDRGSWSCEVALLFYCL 118
Query: 758 KVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIE 817
K+ +PNN L RGNHE+ ++N ++GF EC + +R ++ + F LPLA LI
Sbjct: 119 KILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQR----IFNMFAQSFESLPLATLIN 174
Query: 818 KKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNAR 875
+ MHGG+ + +N+ R G M+LLW+DP G+ P+ R
Sbjct: 175 NDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG--AFMELLWADP---QEANGMGPSQR 229
Query: 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935
G G FGPD F NN L+ I R+HE M G + +G L+T+FSA NYC + N G
Sbjct: 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLG 288
Query: 936 AILVLGRDLVVVPKLIHP-LPPAISSPETSP 965
++ + ++ + I + E
Sbjct: 289 GVIHVVPGHGILQAGRNDDQNLIIETFEAVE 319
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 | Back alignment and structure |
|---|
Score = 339 bits (872), Expect = e-109
Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 636 KLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQ 695
KL D +++I+ + K+++ + Q L + + + S ++++
Sbjct: 5 KLEDGKVTISFM-KELMQWY----------KDQKKLHRKCAYQILVQVKEVLSKLSTLVE 53
Query: 696 LK----APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI 751
I + GD HGQF DL+ +F+ G PS Y+F GD+VDRG S+E I
Sbjct: 54 TTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YIFNGDFVDRGSFSVEVI 108
Query: 752 TLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLP 811
L K+ YP++ HL+RGNHE ++N ++GF E + + + + +F WLP
Sbjct: 109 LTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYELFSEVFEWLP 164
Query: 812 LAALIEKKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEG 869
LA I K++ MHGG+ ++ I ++R ++G + DLLWSDP G
Sbjct: 165 LAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG--PMCDLLWSDP---QPQNG 219
Query: 870 LRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCG 929
+ RG FGPD F N+L I+R+HE +G+E G +T+FSA NYC
Sbjct: 220 RSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCD 278
Query: 930 TANNAGAIL 938
N + +
Sbjct: 279 QMGNKASYI 287
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 | Back alignment and structure |
|---|
Score = 338 bits (870), Expect = e-108
Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 33 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 92
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 93 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 146
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 147 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 202
Query: 841 QRPITMEAGSIVLM-DLLWSDPTEN-----DSVEGLRPNARGPGLVTFGPDRVMEFCNNN 894
R E + M D+LWSDP E+ RG + V EF +N
Sbjct: 203 DRFK--EPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHN 259
Query: 895 DLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL 944
+L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 260 NLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 315
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 335 bits (861), Expect = e-105
Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 32/318 (10%)
Query: 627 TPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERI 686
T E + KL D +++I+ + K+++ + Q L + + +
Sbjct: 149 TIEDEYSGPKLEDGKVTISFM-KELMQWY----------KDQKKLHRKCAYQILVQVKEV 197
Query: 687 FSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD 742
S ++++ I + GD HGQF DL+ +F+ G PS Y+F GD+VD
Sbjct: 198 LSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YIFNGDFVD 252
Query: 743 RGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHR 802
RG S+E I L K+ YP++ HL+RGNHE ++N ++GF E + + +
Sbjct: 253 RGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYEL 308
Query: 803 INRLFNWLPLAALIEKKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSD 860
+ +F WLPLA I K++ MHGG+ ++ I ++R ++G + DLLWSD
Sbjct: 309 FSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG--PMCDLLWSD 366
Query: 861 PTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLIT 920
P G + RG FGPD F N+L I+R+HE +G+E G +T
Sbjct: 367 P---QPQNGRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVT 422
Query: 921 LFSATNYCGTANNAGAIL 938
+FSA NYC N + +
Sbjct: 423 VFSAPNYCDQMGNKASYI 440
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 325 bits (834), Expect = e-100
Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 46 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 105
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 106 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 159
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 160 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 215
Query: 841 QRPITMEAGSIVLM-DLLWSDPTEN-----DSVEGLRPNARGPGLVTFGPDRVMEFCNNN 894
R E + M D+LWSDP E+ RG + V EF +N
Sbjct: 216 DRFK--EPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHN 272
Query: 895 DLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL 944
+L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 273 NLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 328
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 8e-30
Identities = 50/251 (19%), Positives = 82/251 (32%), Gaps = 13/251 (5%)
Query: 684 ERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID--YLFLGDYV 741
I P + D+HGQ+ L+ L + + G+ A+ + + GD
Sbjct: 57 SEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF 116
Query: 742 DRGQHSLETITLLLALKVEYP---NNVHLIRGNHEAADINALFGFRIEC---IERMGERD 795
DRG E + + L + VHL+ GNHE + + + + R
Sbjct: 117 DRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP 176
Query: 796 GIWAWHRINRLFNWLPLAALIEK--KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
+ + WL I K ++ MHGGI E + + A
Sbjct: 177 YNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANAL-YRANVDAS 235
Query: 854 MDLLWSDPTENDSVEGLRP-NARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
L +D N G P RG TF + + ++ IV H +
Sbjct: 236 KKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGH-TSQERVLG 294
Query: 913 FAQGHLITLFS 923
+I + S
Sbjct: 295 LFHNKVIAVDS 305
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 9e-29
Identities = 43/287 (14%), Positives = 81/287 (28%), Gaps = 36/287 (12%)
Query: 153 HCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQR 212
++ ++ ++ E P R G V GG P ++ ++ L + +
Sbjct: 367 SEINLTVDEDYQLLE-CECPINRKFGDVDVAGNDVFYMGGSNPYRVN--EILQLSIHYDK 423
Query: 213 PRWHRVVVQ-GPGPGPRYGHVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269
+ V P R H + + + L+ G + L+D W D + EW
Sbjct: 424 IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWS 481
Query: 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV 329
++ +A + DG +L+ GG L Y + + ++
Sbjct: 482 MIKS---LSHTRFRHSACSLPDGNVLILGGVTEGPAML--LYNVTE---EIFKDVTPKDE 533
Query: 330 SPSPRYQHAAVFVNARLH---VSGGALGGGRMVEDSSSVAVLDTAAGVWC-DTKSVVTSP 385
A + + + GG V D + + D + P
Sbjct: 534 FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP 593
Query: 386 RTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
RY + + I GG L D
Sbjct: 594 LFQRYGS----------------QIKYITPRKLLIVGGTSPSGLFDR 624
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-27
Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 54/285 (18%)
Query: 81 VIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGS 140
+ + P R HT T ++ +L+L GG A
Sbjct: 429 IEVSSSEVPVARMCHTFTTISRNN----------QLLLIGGRKAPHQ------------- 465
Query: 141 AGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS 199
+D +D+ T +WS I R H A ++ V+I GG+
Sbjct: 466 -------GLSDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLILGGVTEGP-- 513
Query: 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH---VMALVGQRYLMAIGGNDGKRPLAD- 255
+ + ++T++ + V + V ++ ++ GG + ++D
Sbjct: 514 --AMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569
Query: 256 --VWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGL 313
++ D ++ + + LL+ GG S + +
Sbjct: 570 AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSI 628
Query: 314 AKHRDGRWEWAIAPGVSPSP------RYQHAAVFV-NARLHVSGG 351
P + V +H+ GG
Sbjct: 629 ISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 3e-10
Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 31/195 (15%)
Query: 277 GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ 336
P + + GG + V + + ++ P R
Sbjct: 383 ECPINRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC 442
Query: 337 HAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADA 394
H + N +L + GG + + D + D W S++ S R+
Sbjct: 443 HTFTTISRNNQLLLIGGRKAPHQGLSD---NWIFDMKTREW----SMIKSLSHTRF---- 491
Query: 395 AGGDAAVELTRRCRHAAAAVGD-LIFIYGGLRGG--VLLDDL--LVAEDLAAAETTTAAS 449
RH+A ++ D + I GG+ G +LL ++ + +D+ + S
Sbjct: 492 -------------RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNS 538
Query: 450 HAAAAAAASNVQSRL 464
+A V +
Sbjct: 539 LVSAGLEFDPVSKQG 553
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 53/288 (18%), Positives = 83/288 (28%), Gaps = 49/288 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
V YD T +WS + R + ++ + + GG + + L
Sbjct: 28 SPIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGGYDGRSRLS-SVECL 83
Query: 207 DL-TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265
D + W+ V P R +G + GG DG R + D
Sbjct: 84 DYTADEDGVWYSVA---PMNVRRGLAGATTLGDM-IYVSGGFDGSRRHTSMERYDPNID- 138
Query: 266 YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEW 323
+W L + G++ GG D + L S Y G W
Sbjct: 139 -QWSMLGD----MQTAREGAGLVVASGVIYCLGGYDGLN-ILNSVEKY---DPHTGHWT- 188
Query: 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383
+ P + R +N ++V GG G + SSV + W S+
Sbjct: 189 NVTP--MATKRSGAGVALLNDHIYVVGGFDGTAHL----SSVEAYNIRTDSWTTVTSM-- 240
Query: 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
T RC A + ++ G G LL
Sbjct: 241 -------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 5e-08
Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHVLDLT 209
V YD T W+ +TP T R+ + + V+ G G A L S E ++
Sbjct: 177 VEKYDPHTGHWTNVTPM---ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVE---AYNIR 230
Query: 210 QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269
W V PR ++ R L AI G DG L+ + D W
Sbjct: 231 TDS--WTTV---TSMTTPRCYVGATVLRGR-LYAIAGYDGNSLLSSIECYDPIID--SWE 282
Query: 270 KLEP 273
+
Sbjct: 283 VVTS 286
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 6e-07
Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 32/152 (21%)
Query: 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVN 343
A ++ +LL+ GG + P+ EW+ P + R A+V ++
Sbjct: 7 TRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQ---EWSFLPSI-TRKRRYVASVSLH 62
Query: 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAA---GVWCDTKSVVTSPRTGRYSADAAGGDAA 400
R++V GG G R SSV LD A GVW +
Sbjct: 63 DRIYVIGGYDGRSR----LSSVECLDYTADEDGVWYSVAPM------------------- 99
Query: 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
RR A +GD+I++ GG G
Sbjct: 100 --NVRRGLAGATTLGDMIYVSGGFDGSRRHTS 129
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 50/290 (17%), Positives = 84/290 (28%), Gaps = 52/290 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL--- 203
+ + + Y+ W R+ PR+ VG ++ GG + D
Sbjct: 36 QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSAL 92
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263
+ +W P PR + ++ + A+GG+ G V +
Sbjct: 93 DCYNP--MTNQWSPCA---PMSVPRNRIGVGVIDGH-IYAVGGSHGCIHHNSVERYEPER 146
Query: 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRW 321
EW + P A + LL GG D ++ L SA Y W
Sbjct: 147 D--EWHLVAP----MLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECY---YPERNEW 196
Query: 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381
I + R ++ ++ +GG G ++ +SV D W +
Sbjct: 197 R-MITA--MNTIRSGAGVCVLHNCIYAAGGYDGQDQL----NSVERYDVETETWTFVAPM 249
Query: 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
RR I++ GG G LD
Sbjct: 250 ---------------------KHRRSALGITVHQGRIYVLGGYDGHTFLD 278
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 49/283 (17%), Positives = 77/283 (27%), Gaps = 64/283 (22%)
Query: 159 TNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV 218
++ + PR +H + GG LS L + + W R+
Sbjct: 3 SHHHHHHSS---GLVPRGSHAPKVGRLIYTA-GGYFRQSLS--YLEAYNPSNG--TWLRL 54
Query: 219 VVQGPGPGPRYGHVMALVGQRYLMAIGG----NDGKRPLADVWALDTAAKPYEWRKLEPE 274
PR G +VG L A+GG DG + + + +W P
Sbjct: 55 ---ADLQVPRSGLAGCVVGGL-LYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCAP- 107
Query: 275 GEGPPPCM----YATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWAIAPG 328
M DG + GG S Y + W +AP
Sbjct: 108 -------MSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERY---EPERDEWH-LVAP- 154
Query: 329 VSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTG 388
+ R +N L+ GG G R+ +S W ++
Sbjct: 155 -MLTRRIGVGVAVLNRLLYAVGGFDGTNRL----NSAECYYPERNEWRMITAM------- 202
Query: 389 RYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
T R + + I+ GG G L+
Sbjct: 203 --------------NTIRSGAGVCVLHNCIYAAGGYDGQDQLN 231
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 23/196 (11%)
Query: 146 AGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-GPAGLSAEDLH 204
V Y+ ++W + P T R + ++ GG G L++
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPM---LTRRIGVGVAVLNRLLYAVGGFDGTNRLNS--AE 187
Query: 205 VLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264
+ W + R G + ++ + A GG DG+ L V D +
Sbjct: 188 CYYPERN--EWRMI---TAMNTIRSGAGVCVLHNC-IYAAGGYDGQDQLNSVERYDVETE 241
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324
W + P + G + + GG D + L S D W+
Sbjct: 242 --TWTFVAPM---KHRRSALGITV-HQGRIYVLGGYDGHTF-LDSVECYDPDTD---TWS 291
Query: 325 IAPGVSPSPRYQHAAV 340
+ S R
Sbjct: 292 EVTRM-TSGRSGVGVA 306
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-23
Identities = 59/288 (20%), Positives = 87/288 (30%), Gaps = 50/288 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
A V CYD +W ++ P+ R + +V GG + +
Sbjct: 27 KAIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGGFNGSLRVR-TVDSY 82
Query: 207 DLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY 266
D + + W V R A++ L A+GG DG L+ V A + +
Sbjct: 83 DPVKDQ--WTSVA---NMRDRRSTLGAAVLNGL-LYAVGGFDGSTGLSSVEAYNIKSN-- 134
Query: 267 EWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASA--YGLAKHRDGRWEW 323
EW + P + GLL GG D +S L++ Y W
Sbjct: 135 EWFHVAP----MNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECY---NATTNEWT- 186
Query: 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383
IA + R +N L+ GG G SV V D W +
Sbjct: 187 YIAE--MSTRRSGAGVGVLNNLLYAVGGHDGPLVR----KSVEVYDPTTNAWRQVADM-- 238
Query: 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
R AV L+++ GG G L
Sbjct: 239 -------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 1e-19
Identities = 51/266 (19%), Positives = 88/266 (33%), Gaps = 55/266 (20%)
Query: 173 TPR-AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH 231
+ R + ++V+ GG P + + D ++R WH+V P R
Sbjct: 3 SVRTRLRTPMNLPKLMVVVGGQAPKAIR--SVECYDFKEER--WHQV---AELPSRRCRA 55
Query: 232 VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM----YATAS 287
M + + A+GG +G + V + D +W + M +
Sbjct: 56 GMVYMAGL-VFAVGGFNGSLRVRTVDSYDPVKD--QWTSVAN--------MRDRRSTLGA 104
Query: 288 ARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345
A +GLL GG D S+ L+S Y + W +AP + R V
Sbjct: 105 AVLNGLLYAVGGFDGST-GLSSVEAY---NIKSNEWF-HVAP--MNTRRSSVGVGVVGGL 157
Query: 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTR 405
L+ GG R + S+V + W + + T R
Sbjct: 158 LYAVGGYDVASR--QCLSTVECYNATTNEW----TYIAEMST-----------------R 194
Query: 406 RCRHAAAAVGDLIFIYGGLRGGVLLD 431
R + +L++ GG G ++
Sbjct: 195 RSGAGVGVLNNLLYAVGGHDGPLVRK 220
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 57/284 (20%), Positives = 89/284 (31%), Gaps = 69/284 (24%)
Query: 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHV 205
V YD + ++W+ + R+ A + G + + G G GL S E
Sbjct: 75 RVRTVDSYDPVKDQWTSVANM---RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVE---A 128
Query: 206 LDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDTAA 263
++ W V P R + +VG L A+GG D ++ L+ V +
Sbjct: 129 YNIKSNE--WFHV---APMNTRRSSVGVGVVG-GLLYAVGGYDVASRQCLSTVECYNATT 182
Query: 264 KPYEWRKLEPEGEGPPPCMYATASARS-------DGLLLLCGGRDASSVPLAS--AYGLA 314
EW + M ++ RS + LL GG D V S Y
Sbjct: 183 N--EWTYIAE--------M---STRRSGAGVGVLNNLLYAVGGHDGPLV-RKSVEVYDP- 227
Query: 315 KHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374
W +A R VN L+V GG G + +SV +
Sbjct: 228 --TTNAWR-QVAD--MNMCRRNAGVCAVNGLLYVVGGDDGSCNL----ASVEYYNPTTDK 278
Query: 375 WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
W +VV+S + T R + +
Sbjct: 279 W----TVVSSCMS----------------TGRSYAGVTVIDKRL 302
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 6e-13
Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 24/204 (11%)
Query: 146 AGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAED-LH 204
+ + V Y++ +N+W + P T R++ VG ++ GG A +
Sbjct: 120 STGLSSVEAYNIKSNEWFHVAPM---NTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176
Query: 205 VLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264
+ T W + R G + ++ L A+GG+DG V D
Sbjct: 177 CYNATTN--EWTYI---AEMSTRRSGAGVGVLNNL-LYAVGGHDGPLVRKSVEVYDPTTN 230
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS--AYGLAKHRDGRWE 322
WR++ A A +GLL + GG D S LAS Y +
Sbjct: 231 --AWRQVADM---NMCRRNAGVCA-VNGLLYVVGGDDGSCN-LASVEYYNPTTD-----K 278
Query: 323 WAIAPGVSPSPRYQHAAVFVNARL 346
W + + R ++ RL
Sbjct: 279 WTVVSSCMSTGRSYAGVTVIDKRL 302
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 57/330 (17%), Positives = 95/330 (28%), Gaps = 59/330 (17%)
Query: 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL---HVLD 207
YD N+ + P+ V + GG+ + ED + L
Sbjct: 14 GAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQ 71
Query: 208 LTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG---NDGKRPLADVWALDTAAK 264
W + P P PR + + +GG DG+R L V D +
Sbjct: 72 FDHLDSEWLGMP---PLPSPRCLFGLGEALNS-IYVVGGREIKDGERCLDSVMCYDRLSF 127
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWE 322
+W + +P P +Y L+ + GG+ + L Y + W+
Sbjct: 128 --KWGESDP----LPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD---PKKFEWK 178
Query: 323 WAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382
+AP + R A + R+ V+ G G SS V W ++
Sbjct: 179 -ELAP--MQTARSLFGATVHDGRIIVAAGVTDTGLT----SSAEVYSITDNKWAPFEAF- 230
Query: 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442
R + ++ ++ GG LV +L
Sbjct: 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDI 270
Query: 443 ET--------TTAASHAAAAAAASNVQSRL 464
A AA A+ + RL
Sbjct: 271 WRYNEEEKKWEGVLREIAYAAGATFLPVRL 300
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 45/277 (16%), Positives = 69/277 (24%), Gaps = 57/277 (20%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
P PRC + + + GG +G
Sbjct: 86 PSPRCLF---GLGEALN---------SIYVVGGREIKDGERC------------------ 115
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
V CYD L+ KW P P H + +V + GG G + V D
Sbjct: 116 LDSVMCYDRLSFKWGESDPL---PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW 268
+ W + P R + R ++ G + +W
Sbjct: 173 KKFE--WKEL---APMQTARSLFGATVHDGR-IIVAAGVTDTGLTSSAEVYSITDN--KW 224
Query: 269 RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH-------RDGRW 321
E P + + G L GG + + +W
Sbjct: 225 APFEAF---PQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280
Query: 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
E GV Y A F+ RL+V +
Sbjct: 281 E-----GVLREIAYAAGATFLPVRLNVLRLTKMAENL 312
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 6e-16
Identities = 50/348 (14%), Positives = 93/348 (26%), Gaps = 80/348 (22%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
P+ ++ ++ + GG E N
Sbjct: 33 QVPKNHV---SLVTKEN---------QVFVAGGLFYNEDNKEDP---------------M 65
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL----SAEDL 203
+A +D L ++W + P P+PR ++ V+ G G S
Sbjct: 66 SAYFLQFDHLDSEWLGMPPL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVM-- 120
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVWALDTA 262
D +W P P YGH + + IGG ++ L + D
Sbjct: 121 -CYDRLSF--KWGES---DPLPYVVYGHTVLSHM-DLVYVIGGKGSDRKCLNKMCVYDPK 173
Query: 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS--AYGLAKHRDGR 320
EW++L P A+ DG +++ G + +S Y + D +
Sbjct: 174 KF--EWKELAP---MQTARSLFGATVH-DGRIIVAAGVTDTG-LTSSAEVYSI---TDNK 223
Query: 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC-DTK 379
W P R + V + L+ GG L+ +W +
Sbjct: 224 WA-PFEA--FPQERSSLSLVSLVGTLYAIGG-FATLETESGELVPTELND---IWRYN-- 274
Query: 380 SVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427
++ A + + + +
Sbjct: 275 -----EEEKKWEGVLR--------EIAYAAGATFLPVRLNVLRLTKMA 309
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 1e-22
Identities = 50/295 (16%), Positives = 83/295 (28%), Gaps = 62/295 (21%)
Query: 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLD 207
++ W+ I P R +V I GG + + +
Sbjct: 22 QPQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQLFPIK--RMDCYN 76
Query: 208 LTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVWALDTAAKPY 266
+ + W+ + P PR + + GG G L DT +
Sbjct: 77 VVKDS--WYSKL---GPPTPRDSLAACAAEGK-IYTSGGSEVGNSALYLFECYDTRTE-- 128
Query: 267 EWRKLEPEGEGPPPCM----YATASARSDGLLLLCGGRDASSV---PLASA--YGLAKHR 317
W M + ++GL+ +CGG ++V L S Y
Sbjct: 129 SWHTKPS--------MLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVY---DPA 177
Query: 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377
W + P R H VFV ++ GG G G + +V D W
Sbjct: 178 TETWT-ELCP--MIEARKNHGLVFVKDKIFAVGGQNGLGGL----DNVEYYDIKLNEWKM 230
Query: 378 TKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
+ + AAVG ++++ G +G L
Sbjct: 231 VSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVGRLGH 264
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 4e-15
Identities = 51/265 (19%), Positives = 82/265 (30%), Gaps = 56/265 (21%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG--IGPAGL-SAEDL 203
+ CY+V+ + W PPTPR + A A + GG +G + L E
Sbjct: 67 FPIKRMDCYNVVKDSWYSKLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFE-- 121
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG----KRPLADVWAL 259
D + WH R H M + GG+ G R L
Sbjct: 122 -CYDTRTE--SWHTK---PSMLTQRCSHGMVEAN-GLIYVCGGSLGNNVSGRVLNSCEVY 174
Query: 260 DTAAKPYEWRKLEPEGEGPPPCMYATASARS-------DGLLLLCGGRDASSVPLAS--A 310
D A + W +L P M AR + GG++ L +
Sbjct: 175 DPATE--TWTELCP--------M---IEARKNHGLVFVKDKIFAVGGQNGLGG-LDNVEY 220
Query: 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370
Y + + W+ ++P P V + ++V G G GR+ + +T
Sbjct: 221 YDI---KLNEWK-MVSP--MPWKGVTVKCAAVGSIVYVLAGFQGVGRL----GHILEYNT 270
Query: 371 AAGVWCDTKSVVTSPRTGRYSADAA 395
W + R ++
Sbjct: 271 ETDKW----VANSKVRAFPVTSCLI 291
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 34/194 (17%), Positives = 54/194 (27%), Gaps = 40/194 (20%)
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
+ GG + W + P A D ++ + GG
Sbjct: 15 IALFGG----SQPQSCRYFNPKDY--SWTDIRC----PFEKRRDAACVFWDNVVYILGGS 64
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
+ Y + W + P+PR AA +++ SGG+ G
Sbjct: 65 QLFPIKRMDCYNV---VKDSWY-SKLG--PPTPRDSLAACAAEGKIYTSGGSEVGN---S 115
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DT W S+ LT+RC H LI++
Sbjct: 116 ALYLFECYDTRTESWHTKPSM---------------------LTQRCSHGMVEANGLIYV 154
Query: 421 YGGLRGGVLLDDLL 434
GG G + +L
Sbjct: 155 CGGSLGNNVSGRVL 168
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 25/142 (17%), Positives = 35/142 (24%), Gaps = 43/142 (30%)
Query: 290 SDGLLLLCGGRDASSV----PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345
D + L GG S P +D W P R A VF +
Sbjct: 11 HDYRIALFGGSQPQSCRYFNP----------KDYSWTDIRCP---FEKRRDAACVFWDNV 57
Query: 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTR 405
+++ GG+ + + W T
Sbjct: 58 VYILGGSQLF-----PIKRMDCYNVVKDSWYSKLGP---------------------PTP 91
Query: 406 RCRHAAAAVGDLIFIYGGLRGG 427
R AA A I+ GG G
Sbjct: 92 RDSLAACAAEGKIYTSGGSEVG 113
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 8e-22
Identities = 49/328 (14%), Positives = 90/328 (27%), Gaps = 58/328 (17%)
Query: 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL---HVLDL 208
YD + N+ PR V + GG+ + + + L
Sbjct: 26 AVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQL 83
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPY 266
W + P P R + V + + + G D + L V D A
Sbjct: 84 DNVSSEWVGLP---PLPSARCLFGLGEVDDK-IYVVAGKDLQTEASLDSVLCYDPVAA-- 137
Query: 267 EWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWA 324
+W +++ P +Y +G++ GG+ Y + G W+
Sbjct: 138 KWSEVKN----LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIY---NPKKGDWK-D 189
Query: 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTS 384
+AP +PR ++ ++GG G +SV D W
Sbjct: 190 LAP--MKTPRSMFGVAIHKGKIVIAGGVTEDGLS----ASVEAFDLKTNKWEVMTEF--- 240
Query: 385 PRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAET 444
R + ++ ++ GG L ++
Sbjct: 241 ------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282
Query: 445 --------TTAASHAAAAAAASNVQSRL 464
A+ AS + +RL
Sbjct: 283 YEDDKKEWAGMLKEIRYASGASCLATRL 310
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 5e-16
Identities = 57/372 (15%), Positives = 105/372 (28%), Gaps = 94/372 (25%)
Query: 66 VVGPRCAPTYSVV-NAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA 124
+V A Y + N PR ++ ++ + GG
Sbjct: 20 LVNDTAAVAYDPMENECYLTALAEQIPRNHS---SIVTQQN---------QVYVVGGLYV 67
Query: 125 LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV- 183
E N + D ++++W + P P+ R V
Sbjct: 68 DEENKDQP---------------LQSYFFQLDNVSSEWVGLPPL---PSARCLFGLGEVD 109
Query: 184 GTMVVIQGGIGPAGL----SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
+ V+ G S D +W V P YGH +
Sbjct: 110 DKIYVV-AGKDLQTEASLDSVL---CYDPVAA--KWSEV---KNLPIKVYGHNVISHN-G 159
Query: 240 YLMAIGG-NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-------D 291
+ +GG D K+ V+ + +W+ L P M + RS
Sbjct: 160 MIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAP--------M---KTPRSMFGVAIHK 206
Query: 292 GLLLLCGGRDASSVPLAS--AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349
G +++ GG + AS A+ L + +WE + P R + V + L+
Sbjct: 207 GKIVIAGGVTEDGL-SASVEAFDL---KTNKWE-VMTE--FPQERSSISLVSLAGSLYAI 259
Query: 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRH 409
GG ++ + V D +W ++ R
Sbjct: 260 GGFAMIQLESKEFAPTEVND----IWK------YEDDKKEWAGMLK--------EIRYAS 301
Query: 410 AAAAVGDLIFIY 421
A+ + + ++
Sbjct: 302 GASCLATRLNLF 313
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-GPAGLSAEDLHV 205
G +A V +D+ TNKW +T F P R++ ++ + GG S E
Sbjct: 219 GLSASVEAFDLKTNKWEVMTEF---PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPT 275
Query: 206 LDLTQQRPRWHRVVVQGPGPGPRYGHVMA-LVGQRYLMAIGG 246
+ + G RY + L + L +
Sbjct: 276 EVNDIWKYEDDKKEWAGMLKEIRYASGASCLATRLNLFKLSK 317
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 1e-19
Identities = 42/294 (14%), Positives = 69/294 (23%), Gaps = 70/294 (23%)
Query: 166 TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225
+ E P P + V I G + LD + +W + P
Sbjct: 1 SVLPETPVPFKSGTGAIDNDTVYIGLGSA-----GTAWYKLDTQAKDKKWTAL---AAFP 52
Query: 226 G-PRYGHVMALVGQRYLMAIGG-----NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279
G PR A + L GG + DV + W KL P
Sbjct: 53 GGPRDQATSAFIDGN-LYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLMSH---AP 106
Query: 280 PCMYATASARSDGLLLLCGGRDASS------------------VPLASAYGLAKHRDGRW 321
M + +G + GG + + + + Y K D +
Sbjct: 107 MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFF 166
Query: 322 ------------EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLD 369
+W+ A A V + + G G + AV +
Sbjct: 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLR-----TDAVFE 221
Query: 370 TAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ + + A D + GG
Sbjct: 222 LDFTGNNLKWNKLAPVSSPD---------------GVAGGFAGISNDSLIFAGG 260
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 5e-17
Identities = 51/337 (15%), Positives = 84/337 (24%), Gaps = 67/337 (19%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
GPR T + L +FGG G L
Sbjct: 53 GGPRDQATSAFI------------DGNLYVFGGI----------------GKNSEGLTQV 84
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
DVH Y+ TN W ++ P A HV + GG + + + DL
Sbjct: 85 FNDVHKYNPKTNSWVKLMSH--APMGMAGHVTFVHNGKAYVTGG---VNQNIFNGYFEDL 139
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW 268
+ + + + + + D + + +W
Sbjct: 140 NEAGKDSTAI---DKINAHYFDK--------------KAEDYFFNKFLLSFDPSTQ--QW 180
Query: 269 RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG 328
GE P A L G + + + L + +AP
Sbjct: 181 SYA---GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237
Query: 329 VSPSPRYQHAAVFVNARLHVSG-GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRT 387
SP A N L +G G R + + + +
Sbjct: 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTD---IHLWHN 294
Query: 388 GRYSADAAGGDAAVEL-TRRCRHAAAAVGDLIFIYGG 423
G++ EL R + + + I GG
Sbjct: 295 GKWDKSG-------ELSQGRAYGVSLPWNNSLLIIGG 324
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 3e-13
Identities = 39/259 (15%), Positives = 66/259 (25%), Gaps = 41/259 (15%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGAT------ALEGNSAASGTPSSAGSAG 142
P GH + + GG E + A ++
Sbjct: 106 PMGMAGH---VTFVHNG---------KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153
Query: 143 IRLAGATA-------DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGP 195
A + +D T +WS P A G + G
Sbjct: 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES--PWYGTAGAAVVNKGDKTWLINGEAK 211
Query: 196 AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA----IGGNDGKR 251
GL + + LD T +W+++ P G + + A G+
Sbjct: 212 PGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENY 270
Query: 252 PLADVWALDTAAKPYEWRKLEPE-------GEGPPPCMYATASARSDGLLLLCGGRDASS 304
+A + K Y GE Y S + LL+ GG A
Sbjct: 271 QNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLPWNNSLLIIGGETAGG 329
Query: 305 VPLASAYGLAKHRDGRWEW 323
+ + + +D +
Sbjct: 330 KAVTDSVLI-TVKDNKVTV 347
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 3e-10
Identities = 31/229 (13%), Positives = 53/229 (23%), Gaps = 48/229 (20%)
Query: 278 PPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337
P P T A + + + G ++ W PR Q
Sbjct: 7 PVPFKSGTG-AIDNDTVYIGLGSAGTAW---YKLDTQAKDKK---WTALAAFPGGPRDQA 59
Query: 338 AAVFVNARLHVSGG-ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAG 396
+ F++ L+V GG + + + V + W S G
Sbjct: 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG-------- 111
Query: 397 GDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAA 456
H ++ GG+ + EDL A
Sbjct: 112 ------------HVTFVHNGKAYVTGGVNQNIFNGYF---EDL----NEAGKDSTAIDKI 152
Query: 457 ASNVQSRLPGRYGFVDE-----------RTRQTIPEAAPDGS--VVLGN 492
++ + Y F P G+ V G+
Sbjct: 153 NAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGD 201
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 25/197 (12%), Positives = 43/197 (21%), Gaps = 46/197 (23%)
Query: 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATA 150
G + G + L G G+R T
Sbjct: 190 GTAGAAVVN------------KGDKTWLINGEA----------------KPGLR----TD 217
Query: 151 DVHCYDVLT--NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
V D KW+++ P P + +++ G
Sbjct: 218 AVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYA 277
Query: 209 TQQRPRWHRV----------VVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVW 257
+ + + G R V L+ IGG G + + D
Sbjct: 278 HEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS-LLIIGGETAGGKAVTDSV 336
Query: 258 ALDTAAKPYEWRKLEPE 274
+ + LE
Sbjct: 337 LITVKDNKVTVQNLEHH 353
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 4e-13
Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 22/152 (14%)
Query: 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG 744
+ +++ ++ + + I GD+HG L L D +GD V++G
Sbjct: 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVS-FKQGSDTLV----AVGDLVNKG 60
Query: 745 QHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRIN 804
S + LL L + + GNH+A + + + E + RD + +
Sbjct: 61 PDSFGVVRLLKRL------GAYSVLGNHDAKLLKLVKKLGKK--ECLKGRDAKSSLAPLA 112
Query: 805 R-----LFNWL---PLAA-LIEKKIICMHGGI 827
+ + +L P + ++ H G+
Sbjct: 113 QSIPTDVETYLSQLPHIIRIPAHNVMVAHAGL 144
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 41/212 (19%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GDLHG + +LM D G + D+ +GD VDRG ++E + L+
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDN-KKDLLI----SVGDLVDRGAENVECLELITFP---- 67
Query: 762 PNNVHLIRGNHEAADINALFGFRIEC--------------IERMGERDGIWAWHRINRLF 807
+RGNHE I+ L ++ + L
Sbjct: 68 --WFRAVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKAD--ELP 123
Query: 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSV 867
+ L +KK + H +P+ + ++W+ ++S
Sbjct: 124 LIIEL-VSKDKKYVICHADY------PFDEYEFGKPVDHQ-------QVIWNRERISNSQ 169
Query: 868 EGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
G+ +G FG ++ + I
Sbjct: 170 NGIVKEIKGADTFIFGHTPAVKPLKFANQMYI 201
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 5e-12
Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 18/199 (9%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GD+HG + +L+ L + + D + GD V RG SL+ + + +L
Sbjct: 5 LIGDVHGCYDELIALLHKVE-FTPGKDTLW----LTGDLVARGPGSLDVLRYVKSLG--- 56
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWL---PLAALIEK 818
++V L+ GNH+ + G + + + L NWL PL + E+
Sbjct: 57 -DSVRLVLGNHDLHLLAVFAGIS--RNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEE 113
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
K + M ++ + R + S L + D P RG G
Sbjct: 114 KKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY--GDMPNNWSPELRGLG 171
Query: 879 LVTFGPDRV--MEFCNNND 895
+ F + M FC N
Sbjct: 172 RLRFITNAFTRMRFCFPNG 190
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 3e-10
Identities = 62/399 (15%), Positives = 110/399 (27%), Gaps = 129/399 (32%)
Query: 649 KKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSE--PSVLQLKAPI----KI 702
K +++ F DC ++ D + I S E ++ K + ++
Sbjct: 19 KDILSVFE------DAFVDNF--DCKDVQD---MPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 703 FGDLHGQ--------FGDLM---------RLFDEYGSPSTAGDIAYIDY---------LF 736
F L + +++ + E PS + YI+ +F
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM-YIEQRDRLYNDNQVF 126
Query: 737 LGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796
V R Q L+ LL L+ NV + G + G
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPA--KNV-------------LIDG--------VL---G 160
Query: 797 IWAWHRINRLFNWLPLAALIEKKIIC-MHGGI-----GRSINHVEQIENLQR-------- 842
W+ L + K+ C M I + +E LQ+
Sbjct: 161 SGKT--------WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 843 -----------PITMEAGSIVLMDLLWSDPTEN-----DSVEGLRP-NARGPG---LVTF 882
+ + + L LL S P EN +V+ + NA L+T
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
+V +F L H + + +L Y
Sbjct: 273 RFKQVTDF-----LSAATTTHISLDHHSMTLTPDEVKSLLL--KYLDCRPQ--------- 316
Query: 943 DLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANR 981
DL +P +I + D W + +N ++
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNW-KHVNCDK 354
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 4e-08
Identities = 88/604 (14%), Positives = 154/604 (25%), Gaps = 231/604 (38%)
Query: 460 VQSRLPGRYGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRL 519
V+ L Y F+ + P + MY I + RL
Sbjct: 83 VEEVLRINYKFLMSPIKT--------------EQRQPSMMTRMY--IEQRD-------RL 119
Query: 520 TKGVESLVQASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQMIKPDSAGS 579
+ + + + + A+ + V + D G SGK
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-DGVLG-----SGKT--------- 164
Query: 580 NSIAPAGVRLHHRAVVVAAETGGALGGMVRQLSI-DQFENEGRRVSYG---TPESATAAR 635
VA + + + + + ++ +PE+
Sbjct: 165 ---------------WVALDV-------CLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 636 KLLDRQMSIN-------SVPKKVIAHLLKPRGWKPPVRRQFF----------LDCNEIAD 678
+ L Q+ N S K+ H ++ +RR L +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKSKPYENCLLVLL-----N 252
Query: 679 LCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYL--- 735
+ ++ + F +L + L+ T D+L
Sbjct: 253 VQNA--KA-------------WNAF-NLSCKI--LL----------TTRFKQVTDFLSAA 284
Query: 736 ----FLGDYVDRGQHSLETITLLL-ALKVEY---PNNVHLIRGNHEAADIN----ALFGF 783
D+ E +LLL L P E N ++
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP---------REVLTTNPRRLSIIA- 334
Query: 784 RIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR- 842
E + RDG+ W + L +IE S+N +E E +
Sbjct: 335 -----ESI--RDGLATWDNWKHVNCD-KLTTIIES-----------SLNVLEPAEYRKMF 375
Query: 843 ----------PITMEAGSIVLMDLLWSDPTENDS---VEGLRPN---ARGPGLVTFG-PD 885
I +L L+W D ++D V L + P T P
Sbjct: 376 DRLSVFPPSAHIPTI----LLS-LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
Query: 886 RVMEFC--NNNDLQL---------IVRAHEC------VMDG--FERFA-------QGHLI 919
+E N+ L I + + +D + +
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490
Query: 920 TLFSAT-----------NYCGTANNA-GAILVLGRDLVVVPKLIHPLPPAISSPETSPER 967
TLF + TA NA G+IL + L I + P+ ER
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD-----NDPK--YER 543
Query: 968 HIED 971
+
Sbjct: 544 LVNA 547
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} Length = 246 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 21/145 (14%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
I D+H L + + G D LGD V G E + L+ L
Sbjct: 8 IISDVHANLVALEAVLSDAGRVD--------DIWSLGDIVGYGPRPRECVELVRVL---- 55
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR----LFNWLPLAALIE 817
+ GNH+ A + ++ + W ++ LP +I+
Sbjct: 56 -APNISVIGNHDWA---CIGRLSLDEFNPVARFASYWTTMQLQAEHLQYLESLPN-RMID 110
Query: 818 KKIICMHGGIGRSINHVEQIENLQR 842
+HG I +
Sbjct: 111 GDWTVVHGSPRHPIWEYIYNARIAA 135
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Length = 252 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 4/104 (3%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
+ + ++ G L G Y LG+ V + E I ++ L
Sbjct: 4 VAVLANIAGNLPALTAALSRIEEMREEGYEIE-KYYILGNIVGLFPYPKEVIEVIKDLTK 62
Query: 760 EYPNNVHLIRGNHEAADINALF-GFRIECIERMGERDGIWAWHR 802
+ NV +IRG ++ + I+++ + +
Sbjct: 63 K--ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALK 104
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Length = 270 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 21/144 (14%), Positives = 39/144 (27%), Gaps = 20/144 (13%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + D+HG L + + A + +Y LGD + G + LL L
Sbjct: 14 IALLSDIHGNTTALEAVLAD------ARQLGVDEYWLLGDILMPGTGRRRILDLLDQL-- 65
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIEC--IERMGERDGIWAWHRI---NRLFNWLPLAA 814
+ GN E + + + +R R + I
Sbjct: 66 ---PITARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQ 122
Query: 815 LIE----KKIICMHGGIGRSINHV 834
+ + H ++
Sbjct: 123 IHRQFGDLTVGISHHLPDKNWGRE 146
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 998 | |||
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 100.0 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 100.0 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 100.0 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 100.0 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 100.0 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 100.0 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 100.0 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 99.97 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 99.96 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 99.95 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.95 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 99.88 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.88 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.76 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.43 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.37 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.32 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.65 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.61 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 98.55 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.32 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.3 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.27 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.17 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 97.96 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 97.93 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 97.87 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 97.19 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 97.08 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.01 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 96.93 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 96.91 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 96.8 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 96.74 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.66 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.5 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 96.28 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.16 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.14 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.0 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.84 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 95.69 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 95.66 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 95.55 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 95.47 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 95.35 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 95.33 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 95.23 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 95.07 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 94.83 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 94.69 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 94.3 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.14 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 93.93 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 93.81 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 93.75 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 93.61 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 93.38 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 93.31 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 93.3 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 93.03 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 92.74 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 92.73 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 92.54 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 92.51 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 92.5 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 92.5 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 92.48 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 92.36 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 92.32 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 92.14 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 91.94 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 91.94 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 91.42 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 91.32 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 90.89 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 90.69 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 90.27 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 90.07 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 89.75 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 89.1 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 89.06 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 88.94 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 88.77 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 88.69 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 87.95 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 87.4 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 87.27 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 87.26 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 86.92 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 86.57 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 86.35 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 86.21 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 85.84 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 85.81 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 85.76 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 85.53 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 85.51 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 85.47 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 85.46 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 85.27 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 85.25 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 84.99 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 84.44 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 84.19 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 84.03 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 83.7 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 83.34 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 83.22 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 83.19 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 82.36 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 82.33 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 81.99 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 81.3 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 81.01 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 80.86 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 80.8 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 80.59 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 80.3 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 80.13 |
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-72 Score=609.45 Aligned_cols=291 Identities=47% Similarity=0.851 Sum_probs=276.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|++|++.+.|++.. .+.|+++++..||++|+++|.+||+++++.+|++||||||||+.+|+++|+..|+++.+
T Consensus 8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCCc--ccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 789999999988776543 45689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.+ ...+|.+|.||.| +.||++++
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~ 231 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 231 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccc--cccCcccCCCCcc-eeeCHHHH
Confidence 9999999999999999999999999999999999999988765 899999999986 3579999999999 78999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (998)
++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.+++++.+++++|.|.
T Consensus 232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~ 298 (299)
T 3e7a_A 232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 298 (299)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred HHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999884
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-68 Score=590.50 Aligned_cols=319 Identities=45% Similarity=0.807 Sum_probs=274.4
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|+.|++.+.+++. ....|+++++..||++|+++|++||+++++.+|++||||||||+.+|+++|+..|+++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 78899999987665543 234789999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+|||.+|++||+.||.++++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhcc----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999985 35899999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+++++++++|||||||+|.+.++++|+.+.||.+.+..+ +++|+|||||.. ...+|.+|.||.+ +.||++++
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~ 232 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 232 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCcc--ccCCcCcccCCCc-eeeChHHH
Confidence 9999999999999999999999999999999999999887654 889999999986 3578999999999 78999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCCCCCCCCCCcc
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPER 967 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (998)
++||++|++++||||||++++||+++++++|||||||||||+.++|+||||.|++++.+++++|.|.+.. ..
T Consensus 233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~-~~------- 304 (330)
T 1fjm_A 233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKN-KG------- 304 (330)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred HHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecCCccc-cc-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999998654 10
Q ss_pred cchhhHHHHh-hcCCCCCCCCCCCCC
Q 001901 968 HIEDTWMQEL-NANRPPTPTRGRPQN 992 (998)
Q Consensus 968 ~~~~~~~~~~-~~~~~~~~~~~~~~~ 992 (998)
...|+.++ ...||+||||++|+.
T Consensus 305 --~~~~~~~~~~~~~~~~~~~~~~~~ 328 (330)
T 1fjm_A 305 --KYGQFSGLNPGGRPITPPRNSAKA 328 (330)
T ss_dssp --------------------------
T ss_pred --ccccccccccccCCCCCCCCcccc
Confidence 11244322 257999999998863
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-68 Score=583.62 Aligned_cols=294 Identities=32% Similarity=0.581 Sum_probs=272.9
Q ss_pred ChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHc
Q 001901 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEY 720 (998)
Q Consensus 645 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~----i~vvGDiHG~~~dL~~il~~~ 720 (998)
.++++++|+++.+.+ .|+++++.+||++|+++|++||++++++.| ++||||||||+.+|+++|+..
T Consensus 13 ~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~ 82 (315)
T 3h63_A 13 ISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELN 82 (315)
T ss_dssp HHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHh
Confidence 456888999998753 588999999999999999999999999877 999999999999999999999
Q ss_pred CCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhh
Q 001901 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAW 800 (998)
Q Consensus 721 g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~ 800 (998)
|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+ ..+|
T Consensus 83 g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~l~ 153 (315)
T 3h63_A 83 GLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQMY 153 (315)
T ss_dssp CCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHHH
T ss_pred CCCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhh----hHHH
Confidence 9987652 599999999999999999999999999999999999999999999999999999999995 4699
Q ss_pred hhhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCc
Q 001901 801 HRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGL 879 (998)
Q Consensus 801 ~~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~ 879 (998)
+.+.++|++||+++++++++||||||| ++.+.++++|+.+.||.+++..+ +++|||||||.+ ..+|.+|.||.|
T Consensus 154 ~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~g- 228 (315)
T 3h63_A 154 ELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS- 228 (315)
T ss_dssp HHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-
T ss_pred HHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCC---CCCcCcCCCCce-
Confidence 999999999999999999999999999 78899999999999999887765 899999999985 468999999999
Q ss_pred eeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEc-CCceEEeEEeccCCCCC
Q 001901 880 VTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAI 958 (998)
Q Consensus 880 ~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~~ 958 (998)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.++ +++...++.|.+.|...
T Consensus 229 ~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~~ 308 (315)
T 3h63_A 229 CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 308 (315)
T ss_dssp EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred EEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999995 67888999999887665
Q ss_pred CCCC
Q 001901 959 SSPE 962 (998)
Q Consensus 959 ~~~~ 962 (998)
..|+
T Consensus 309 ~~p~ 312 (315)
T 3h63_A 309 VKPM 312 (315)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 4443
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-68 Score=589.01 Aligned_cols=297 Identities=34% Similarity=0.620 Sum_probs=273.3
Q ss_pred CChhHHHHH-HHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC------eEEEecCCCCHHHHHHH
Q 001901 644 INSVPKKVI-AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP------IKIFGDLHGQFGDLMRL 716 (998)
Q Consensus 644 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~------i~vvGDiHG~~~dL~~i 716 (998)
+.+.++++| ++|.+.+ .|+++++..||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 456688899 7776542 588999999999999999999999999999 99999999999999999
Q ss_pred HHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcc
Q 001901 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796 (998)
Q Consensus 717 l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~ 796 (998)
|+..|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999986541 699999999999999999999999999999999999999999999999999999999995
Q ss_pred hhhhhhhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCC
Q 001901 797 IWAWHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875 (998)
Q Consensus 797 ~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~r 875 (998)
..+|+.+.++|++||++++++++|||||||| +|.+.++++|+.+.|+.+++..+ +++|||||||.+ ..+|.+|.|
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R 229 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR 229 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCC---cCCcccCCC
Confidence 4699999999999999999999999999999 78999999999999999887765 899999999985 468999999
Q ss_pred CCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcC-----------Cc
Q 001901 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-----------DL 944 (998)
Q Consensus 876 g~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~-----------~~ 944 (998)
|.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||||.|++ ++
T Consensus 230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~ 308 (335)
T 3icf_A 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ 308 (335)
T ss_dssp C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred CCc-eeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccC
Confidence 999 689999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred eEEeEEeccCCCCCCCCCCC
Q 001901 945 VVVPKLIHPLPPAISSPETS 964 (998)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~ 964 (998)
.+.++.|.+.|.....|+.+
T Consensus 309 ~~~~~~f~~~~~~~~~p~~y 328 (335)
T 3icf_A 309 NLIIETFEAVEHPDIKPMAY 328 (335)
T ss_dssp TEEEEEECCCCCCSCCTTTT
T ss_pred ceeEEEEecCCCCCCCchhh
Confidence 99999999987766555544
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-68 Score=587.37 Aligned_cols=290 Identities=36% Similarity=0.604 Sum_probs=267.8
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++.+++++++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 688899998753 588999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc----hhHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCccc-CCCCCCceee
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~----~~~~~~-n~rg~~~~~f 882 (998)
++||++++++++||||||||+|.+.++++|+.|.||.+++..+ +++|||||||.+... ..+|.+ +.||.| +.|
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F 247 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCc-eEE
Confidence 9999999999999999999999999999999999999988766 899999999986421 245765 579999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCC------eEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (998)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.+++++ +.++.|.+.|.
T Consensus 248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h 326 (357)
T 3ll8_A 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 326 (357)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred ChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEECCc-ceEEEecCCCC
Confidence 9999999999999999999999999999999886 6999999999999999999999998876 67889988776
Q ss_pred CCCC
Q 001901 957 AISS 960 (998)
Q Consensus 957 ~~~~ 960 (998)
.+..
T Consensus 327 p~~~ 330 (357)
T 3ll8_A 327 PYWL 330 (357)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6543
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-64 Score=560.55 Aligned_cols=287 Identities=39% Similarity=0.726 Sum_probs=269.7
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCC
Q 001901 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA 726 (998)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~ 726 (998)
.++.+|+.|++.+ .|+++++..||++|+++|++||+++++..|++||||||||+.+|+++|+..+.++.+
T Consensus 9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 78 (309)
T 2ie4_C 9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT 78 (309)
T ss_dssp HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred HHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 3788999987642 589999999999999999999999999999999999999999999999999987765
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhh
Q 001901 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (998)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (998)
+|||||||||||++|+|||.+|++||++||.++++||||||.+.++..|||.+||.++||.. .+|+.+.++
T Consensus 79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~ 149 (309)
T 2ie4_C 79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL 149 (309)
T ss_dssp ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred ------EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999863 599999999
Q ss_pred hcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHH
Q 001901 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (998)
Q Consensus 807 f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (998)
|++||+++++++++|||||||+|.+.++++|+.++|+.+++..+ .++|+|||||.. ..+|.++.||.| +.||+++
T Consensus 150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~ 224 (309)
T 2ie4_C 150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI 224 (309)
T ss_dssp TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred HHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCcc---ccccccCCCCcc-cccCHHH
Confidence 99999999999999999999999999999999999999887655 889999999985 478999999999 6899999
Q ss_pred HHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
+++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.++++.|.|.+..
T Consensus 225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-64 Score=580.22 Aligned_cols=290 Identities=37% Similarity=0.610 Sum_probs=267.6
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++.++++|++.+ .|+++++..||++|+++|++||+++++.+|++|||||||||.+|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 677888887653 588999999999999999999999999999999999999999999999998887755
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||++||..+|+ ..+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh----hHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 46999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCcccC-CCCCCceee
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTF 882 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~----~~~~~~n-~rg~~~~~f 882 (998)
++||+++++++++|||||||+|.+.++++|+.|.|+.+++..+ +++|||||||..... ..+|.+| .||.| +.|
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F 260 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 260 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcc-ccc
Confidence 9999999999999999999999999999999999999887665 899999999986421 2568887 79999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCC------eEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (998)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.|+++ .+.++.|.+.+.
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~ 339 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 339 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeCC-cceEEEecCCCC
Confidence 9999999999999999999999999999999987 599999999999999999999999998 588999988776
Q ss_pred CCCC
Q 001901 957 AISS 960 (998)
Q Consensus 957 ~~~~ 960 (998)
.+..
T Consensus 340 p~~~ 343 (521)
T 1aui_A 340 PYWL 343 (521)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 5543
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-58 Score=543.55 Aligned_cols=293 Identities=32% Similarity=0.596 Sum_probs=269.7
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHcC
Q 001901 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (998)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~----i~vvGDiHG~~~dL~~il~~~g 721 (998)
..++.+++.+.+.+ .+++.++..||.++.++|.+||++++++.| ++||||||||+.+|+++|+..|
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 34678888887542 478999999999999999999999999877 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhh
Q 001901 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (998)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (998)
.++... .|||||||||||++|+||+.+|++||++||.+|++||||||.+.++..|||..||.++|+. .+|.
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 886541 5999999999999999999999999999999999999999999999999999999999975 5999
Q ss_pred hhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCce
Q 001901 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (998)
Q Consensus 802 ~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~ 880 (998)
.+.++|++||++++++++|||||||| ++...++++|+.+.|+.+++..+ +++|+|||||.. ..+|.++.||.| +
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~-~ 382 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 382 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS-E
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCc---cCCcCcCCCCCc-e
Confidence 99999999999999999999999999 77888999999999998887654 899999999985 468999999999 5
Q ss_pred eeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEE-cCCceEEeEEeccCCCCCC
Q 001901 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLPPAIS 959 (998)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~-~~~~~~~~~~~~~~~~~~~ 959 (998)
.||++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.| ++++.+.++.|.+.+....
T Consensus 383 ~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (477)
T 1wao_1 383 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNV 462 (477)
T ss_dssp EECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCSC
T ss_pred eECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999 7889999999998876554
Q ss_pred CCC
Q 001901 960 SPE 962 (998)
Q Consensus 960 ~~~ 962 (998)
.|.
T Consensus 463 ~~~ 465 (477)
T 1wao_1 463 KPM 465 (477)
T ss_dssp CTT
T ss_pred Chh
Confidence 443
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=349.77 Aligned_cols=280 Identities=19% Similarity=0.315 Sum_probs=231.1
Q ss_pred ccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEE
Q 001901 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (998)
Q Consensus 84 ~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~ 163 (998)
..+..|.+|.+|+++.+ +++||+|||. ... .++++++||+.+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~------------~~~i~v~GG~-~~~---------------------~~~~~~~~d~~~~~W~ 52 (308)
T 1zgk_A 7 HHHSSGLVPRGSHAPKV------------GRLIYTAGGY-FRQ---------------------SLSYLEAYNPSNGTWL 52 (308)
T ss_dssp --------------CCC------------CCCEEEECCB-SSS---------------------BCCCEEEEETTTTEEE
T ss_pred ccccCCeeeCCccccCC------------CCEEEEEeCc-CCC---------------------CcceEEEEcCCCCeEe
Confidence 44567889999999998 7899999998 211 7789999999999999
Q ss_pred EecCCCCCCCCccceEEEEeCCEEEEEeCCC---CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcE
Q 001901 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (998)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~---~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~ 240 (998)
.+..+ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|.+|..|+++++++ +
T Consensus 53 ~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~ 123 (308)
T 1zgk_A 53 RLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCA---PMSVPRNRIGVGVIDG-H 123 (308)
T ss_dssp ECCCC---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT--EEEECC---CCSSCCBTCEEEEETT-E
T ss_pred ECCCC---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC--eEeECC---CCCcCccccEEEEECC-E
Confidence 99765 89999999999999999999974 33446789999999987 599997 8999999999999987 8
Q ss_pred EEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001901 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (998)
Q Consensus 241 Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~ 320 (998)
||++||.++...++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+... .+++++.|++.++
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 194 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM---LTRRIGVGVAVL-NRLLYAVGGFDGTN-RLNSAECYYPERN-- 194 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSSC-BCCCEEEEETTTT--
T ss_pred EEEEcCCCCCcccccEEEECCCCC--eEeECCCC---CccccceEEEEE-CCEEEEEeCCCCCC-cCceEEEEeCCCC--
Confidence 999999988888999999999999 99999764 455666665554 99999999998766 4899999999887
Q ss_pred EEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCc
Q 001901 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAA 400 (998)
Q Consensus 321 W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~ 400 (998)
+|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 195 -~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------- 249 (308)
T 1zgk_A 195 -EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPM------------------- 249 (308)
T ss_dssp -EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCC-------------------
T ss_pred -eEeeCCCC-CCccccceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCC-------------------
Confidence 66677654 78999999999999999999987543 278999999999999999866
Q ss_pred cCCCCcceeEEEEECCEEEEEcCCCCCCCcccEEEecccccc
Q 001901 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 401 ~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~Dv~~ld~~~~~ 442 (998)
|.+|..|++++++++|||+||+++...++|++++|.....
T Consensus 250 --p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 250 --KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp --SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred --CCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 6689999999999999999999888889999999976543
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=331.23 Aligned_cols=263 Identities=23% Similarity=0.363 Sum_probs=226.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
+++||+|||.... ..+++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 15 ~~~i~v~GG~~~~----------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 15 PKLMVVVGGQAPK----------------------AIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp CEEEEEECCBSSS----------------------BCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESC
T ss_pred CCEEEEECCCCCC----------------------CCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeC
Confidence 6799999997531 567999999999999999765 889999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.... ...+++++||+.++ +|+.++ ++|.+|+.|+++++++ +||++||.++...++++|+||+.++ +|+.+.
T Consensus 70 ~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~ 140 (302)
T 2xn4_A 70 FNGS-LRVRTVDSYDPVKD--QWTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVA 140 (302)
T ss_dssp BCSS-SBCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEEC
T ss_pred cCCC-ccccceEEECCCCC--ceeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecC
Confidence 8643 45789999999987 599998 8999999999999987 8999999988888999999999999 999997
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCC-CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcc
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~-~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG 351 (998)
++ |.+|..|+++ +.+++||++||.+... ..+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||
T Consensus 141 ~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 141 PM---NTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CC---SSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CC---CCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECC
Confidence 65 4456666554 4599999999986654 35789999999877 55555554 789999999999999999999
Q ss_pred cCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCcc
Q 001901 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (998)
Q Consensus 352 ~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~ 431 (998)
.++.. ..+++++||+++++|+.+..+ |.+|..|+++.++++|||+||.++...++
T Consensus 213 ~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 213 HDGPL----VRKSVEVYDPTTNAWRQVADM---------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp BSSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCc----ccceEEEEeCCCCCEeeCCCC---------------------CCccccCeEEEECCEEEEECCcCCCcccc
Confidence 87543 368899999999999999876 56899999999999999999998888899
Q ss_pred cEEEecccccc
Q 001901 432 DLLVAEDLAAA 442 (998)
Q Consensus 432 Dv~~ld~~~~~ 442 (998)
+++++|.....
T Consensus 268 ~v~~yd~~~~~ 278 (302)
T 2xn4_A 268 SVEYYNPTTDK 278 (302)
T ss_dssp CEEEEETTTTE
T ss_pred cEEEEcCCCCe
Confidence 99999976543
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=343.65 Aligned_cols=280 Identities=18% Similarity=0.220 Sum_probs=222.9
Q ss_pred CCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECC--CCcEE
Q 001901 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TNKWS 163 (998)
Q Consensus 86 g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--t~~W~ 163 (998)
...|.+|.+|+++++ +++||||||.. .+++|+||+. +++|+
T Consensus 4 ~~lP~~r~~~~~~~~------------~~~iyv~GG~~-------------------------~~~~~~~d~~~~~~~W~ 46 (357)
T 2uvk_A 4 PETPVPFKSGTGAID------------NDTVYIGLGSA-------------------------GTAWYKLDTQAKDKKWT 46 (357)
T ss_dssp CCCSSCCCSCEEEEE------------TTEEEEECGGG-------------------------TTCEEEEETTSSSCCEE
T ss_pred CCCCccccceEEEEE------------CCEEEEEeCcC-------------------------CCeEEEEccccCCCCee
Confidence 467999999999998 79999999963 2489999998 49999
Q ss_pred EecCCCCCC-CCccceEEEEeCCEEEEEeCCC----CCCCCcccEEEEEcCCCCCceEEeeecCCCC-CCCcccEEEEEC
Q 001901 164 RITPFGEPP-TPRAAHVATAVGTMVVIQGGIG----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG 237 (998)
Q Consensus 164 ~l~~~g~~P-~pR~~hsa~~~~~~lyVfGG~~----~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P-~~R~~hs~~~~~ 237 (998)
.++.+ | .+|.+|++++++++||||||.. .....++++|+||+.++ +|+.+. +++ .+|++|++++++
T Consensus 47 ~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~---~~~p~~r~~~~~~~~~ 118 (357)
T 2uvk_A 47 ALAAF---PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLM---SHAPMGMAGHVTFVHN 118 (357)
T ss_dssp ECCCC---TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT--EEEECS---CCCSSCCSSEEEEEET
T ss_pred ECCCC---CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC--cEEECC---CCCCcccccceEEEEC
Confidence 99886 6 8999999999999999999982 23346799999999997 599998 444 999999999988
Q ss_pred CcEEEEEcCCCCC----------------------------------CCcccEEEEECCCCCceEEEcccCCCCCCCccc
Q 001901 238 QRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (998)
Q Consensus 238 ~~~Lyv~GG~~g~----------------------------------~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~ 283 (998)
+ +||||||.++. ..++++++||+.++ +|+.+.++ |.+++.
T Consensus 119 ~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~---p~~~~~ 192 (357)
T 2uvk_A 119 G-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGES---PWYGTA 192 (357)
T ss_dssp T-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEEC---SSCCCB
T ss_pred C-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCC---CCCCcc
Confidence 7 89999998754 25789999999999 99999664 444666
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEec--CCCCeEEEEECCCC-CCCCcceeEEEEECCEEEEEcccCCCCC---
Q 001901 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGV-SPSPRYQHAAVFVNARLHVSGGALGGGR--- 357 (998)
Q Consensus 284 ~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~--~~~~~W~w~~~~g~-~P~pR~~hsav~~~~~L~V~GG~~~~~~--- 357 (998)
++++++.+++||||||.+......++++.|+. .++ +|..+..+ .|.+|..|++++++++|||+||.+..+.
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 269 (357)
T 2uvk_A 193 GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSREN 269 (357)
T ss_dssp SCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHH
T ss_pred cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccc
Confidence 56666679999999998766556788988875 444 55566554 2445778999999999999999754321
Q ss_pred ----------ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC
Q 001901 358 ----------MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427 (998)
Q Consensus 358 ----------~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~ 427 (998)
.....+++++||+++++|+++..+ |.+|+.|++++++++||||||++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL---------------------SQGRAYGVSLPWNNSLLIIGGETAG 328 (357)
T ss_dssp HHTTCSSTTTTCCCEECCEEEECC---CEEEEEC---------------------SSCCBSSEEEEETTEEEEEEEECGG
T ss_pred ccccceeccccccceeeEEEEecCCCceeeCCCC---------------------CCCcccceeEEeCCEEEEEeeeCCC
Confidence 011246799999999999999876 6699999999999999999998764
Q ss_pred -CCcccEEEecccc
Q 001901 428 -VLLDDLLVAEDLA 440 (998)
Q Consensus 428 -~~l~Dv~~ld~~~ 440 (998)
..++|++.++...
T Consensus 329 ~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 329 GKAVTDSVLITVKD 342 (357)
T ss_dssp GCEEEEEEEEEC-C
T ss_pred CCEeeeEEEEEEcC
Confidence 4589999887654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=327.70 Aligned_cols=264 Identities=21% Similarity=0.323 Sum_probs=226.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
+++||+|||...... ..+++++||+.+++|+.++.+ |.+|.+|++++++++|||+||
T Consensus 14 ~~~i~~~GG~~~~~~--------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS--------------------PIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTTE--------------------ECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCCc--------------------ceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcC
Confidence 689999999432221 788999999999999999865 889999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCC-CceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 193 IGPAGLSAEDLHVLDLTQQR-PRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t-~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.. .....+++++||+.+++ .+|+.+. ++|.+|..|+++++++ +||++||.++...++++|+||+.++ +|+.+
T Consensus 71 ~~-~~~~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~ 143 (301)
T 2vpj_A 71 YD-GRSRLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWSML 143 (301)
T ss_dssp BC-SSCBCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEEEE
T ss_pred CC-CCccCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEEEC
Confidence 86 34567899999999862 1299996 8999999999999987 8999999998888999999999999 99999
Q ss_pred ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcc
Q 001901 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (998)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG 351 (998)
.++ |.+|..|++++ .+++||++||.++.. .+++++.|++.++ +|..++.+ |.+|..|+++.++++|||+||
T Consensus 144 ~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG 214 (301)
T 2vpj_A 144 GDM---QTAREGAGLVV-ASGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVVGG 214 (301)
T ss_dssp EEC---SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCC---CCCcccceEEE-ECCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEEeC
Confidence 765 44566665554 599999999987765 6899999999877 55555544 789999999999999999999
Q ss_pred cCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCcc
Q 001901 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (998)
Q Consensus 352 ~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~ 431 (998)
.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++...++
T Consensus 215 ~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 215 FDGTA----HLSSVEAYNIRTDSWTTVTSM---------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp BCSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBEE
T ss_pred CCCCc----ccceEEEEeCCCCcEEECCCC---------------------CCcccceeEEEECCEEEEEcCcCCCcccc
Confidence 87643 278999999999999999766 66899999999999999999998888889
Q ss_pred cEEEecccc
Q 001901 432 DLLVAEDLA 440 (998)
Q Consensus 432 Dv~~ld~~~ 440 (998)
+++++|...
T Consensus 270 ~v~~yd~~~ 278 (301)
T 2vpj_A 270 SIECYDPII 278 (301)
T ss_dssp EEEEEETTT
T ss_pred cEEEEcCCC
Confidence 999999755
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=329.38 Aligned_cols=260 Identities=19% Similarity=0.297 Sum_probs=225.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
.+.||+|||... .+++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 11 ~~~l~~~GG~~~------------------------~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 63 (306)
T 3ii7_A 11 HDYRIALFGGSQ------------------------PQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGG 63 (306)
T ss_dssp CCEEEEEECCSS------------------------TTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECC
T ss_pred cceEEEEeCCCC------------------------CceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeC
Confidence 478999999642 46999999999999999776 899999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCC-CCCCcccEEEEECCCCCceEEEc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~-g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.. ....+++++||+.++ +|+.+. ++|.+|++|+++++++ +||++||.+ +...++++|+||+.++ +|+.+
T Consensus 64 ~~--~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~ 133 (306)
T 3ii7_A 64 SQ--LFPIKRMDCYNVVKD--SWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTK 133 (306)
T ss_dssp BS--SSBCCEEEEEETTTT--EEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEE
T ss_pred CC--CCCcceEEEEeCCCC--eEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeC
Confidence 86 567799999999997 599997 8999999999999987 899999997 6677999999999999 99999
Q ss_pred ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC---cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEE
Q 001901 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP---LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (998)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~---~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V 348 (998)
.++ |.+|..|+++ ..+++||++||.+..... +++++.|++.++ +|..++.+ |.+|..|++++++++|||
T Consensus 134 ~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 134 PSM---LTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp CCC---SSCCBSCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEE
T ss_pred CCC---cCCcceeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEE
Confidence 665 4456666555 459999999998766533 899999999987 56666654 789999999999999999
Q ss_pred EcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCC
Q 001901 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGV 428 (998)
Q Consensus 349 ~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~ 428 (998)
+||.+... ..+++++||+.+++|+.+..+ |.+|..|++++++++|||+||+++..
T Consensus 206 ~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 206 VGGQNGLG----GLDNVEYYDIKLNEWKMVSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp ECCEETTE----EBCCEEEEETTTTEEEECCCC---------------------SCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred EeCCCCCC----CCceEEEeeCCCCcEEECCCC---------------------CCCccceeEEEECCEEEEEeCcCCCe
Confidence 99987652 368899999999999999876 66999999999999999999998888
Q ss_pred CcccEEEecccccc
Q 001901 429 LLDDLLVAEDLAAA 442 (998)
Q Consensus 429 ~l~Dv~~ld~~~~~ 442 (998)
.+++++++|.....
T Consensus 261 ~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 261 RLGHILEYNTETDK 274 (306)
T ss_dssp BCCEEEEEETTTTE
T ss_pred eeeeEEEEcCCCCe
Confidence 89999999976644
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=321.21 Aligned_cols=257 Identities=19% Similarity=0.306 Sum_probs=217.5
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcE
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW 162 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W 162 (998)
......|.+|++|+++.+ +++||||||..... .++++++||+.+++|
T Consensus 43 ~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~---------------------~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 43 HQVAELPSRRCRAGMVYM------------AGLVFAVGGFNGSL---------------------RVRTVDSYDPVKDQW 89 (302)
T ss_dssp EEECCCSSCCBSCEEEEE------------TTEEEEESCBCSSS---------------------BCCCEEEEETTTTEE
T ss_pred eEcccCCcccccceEEEE------------CCEEEEEeCcCCCc---------------------cccceEEECCCCCce
Confidence 344578999999999998 78999999986432 678999999999999
Q ss_pred EEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEE
Q 001901 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242 (998)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Ly 242 (998)
+.++.+ |.+|.+|++++++++|||+||... ...++++++||+.++ +|+.+. ++|.+|+.|+++++++ +||
T Consensus 90 ~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iy 159 (302)
T 2xn4_A 90 TSVANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSN--EWFHVA---PMNTRRSSVGVGVVGG-LLY 159 (302)
T ss_dssp EEECCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEE
T ss_pred eeCCCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCC--eEeecC---CCCCcccCceEEEECC-EEE
Confidence 999876 899999999999999999999854 345789999999987 599997 8899999999999988 899
Q ss_pred EEcCCCCCC--CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001901 243 AIGGNDGKR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (998)
Q Consensus 243 v~GG~~g~~--~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~ 320 (998)
++||.++.. .++++++||+.++ +|+.+.++ |.+|..|++ ++.+++||++||.++.. .+++++.|++.++
T Consensus 160 v~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 230 (302)
T 2xn4_A 160 AVGGYDVASRQCLSTVECYNATTN--EWTYIAEM---STRRSGAGV-GVLNNLLYAVGGHDGPL-VRKSVEVYDPTTN-- 230 (302)
T ss_dssp EECCEETTTTEECCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEECCBSSSS-BCCCEEEEETTTT--
T ss_pred EEeCCCCCCCccccEEEEEeCCCC--cEEECCCC---ccccccccE-EEECCEEEEECCCCCCc-ccceEEEEeCCCC--
Confidence 999997653 5899999999999 99999754 445666654 45599999999987654 5789999999877
Q ss_pred EEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc-cCcCCCCCCCCccccCCCCC
Q 001901 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK-SVVTSPRTGRYSADAAGGDA 399 (998)
Q Consensus 321 W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~-~~~~~p~~~~~~~~~~~~~~ 399 (998)
+|..+..+ |.+|..|+++.++++|||+||.++.. ..+++++||+++++|+.++ .+
T Consensus 231 -~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~------------------ 286 (302)
T 2xn4_A 231 -AWRQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCM------------------ 286 (302)
T ss_dssp -EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCC------------------
T ss_pred -CEeeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCccc------------------
Confidence 55566554 68899999999999999999987543 3788999999999999987 44
Q ss_pred ccCCCCcceeEEEEECCEE
Q 001901 400 AVELTRRCRHAAAAVGDLI 418 (998)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~L 418 (998)
+.+|+.|++++++++|
T Consensus 287 ---~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 287 ---STGRSYAGVTVIDKRL 302 (302)
T ss_dssp ---SSCCBSCEEEEEEC--
T ss_pred ---CcccccceEEEecccC
Confidence 6699999999998765
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=321.59 Aligned_cols=256 Identities=18% Similarity=0.236 Sum_probs=221.2
Q ss_pred ecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 82 ~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
+......|.+|.+|+++++ +++||||||.. .. .++++++||+.+++
T Consensus 36 W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~-~~---------------------~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 36 WTDIRCPFEKRRDAACVFW------------DNVVYILGGSQ-LF---------------------PIKRMDCYNVVKDS 81 (306)
T ss_dssp EEECCCCSCCCBSCEEEEE------------TTEEEEECCBS-SS---------------------BCCEEEEEETTTTE
T ss_pred EecCCCCCcccceeEEEEE------------CCEEEEEeCCC-CC---------------------CcceEEEEeCCCCe
Confidence 4455678999999999998 78999999987 21 78899999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|+.+..+ |.+|.+|++++++++|||+||.+.....++++++||+.++ +|+.+. ++|.+|+.|+++.+++ +|
T Consensus 82 W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~i 152 (306)
T 3ii7_A 82 WYSKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKP---SMLTQRCSHGMVEANG-LI 152 (306)
T ss_dssp EEEEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EE
T ss_pred EEECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCC---CCcCCcceeEEEEECC-EE
Confidence 9999876 8999999999999999999998756667899999999987 599986 8999999999999988 89
Q ss_pred EEEcCCCCCCC----cccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC
Q 001901 242 MAIGGNDGKRP----LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (998)
Q Consensus 242 yv~GG~~g~~~----lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~ 317 (998)
|++||.++... ++++|+||+.++ +|+.+.++ |.+|..|.+++. +++||++||.+... .+++++.|++.+
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~i~v~GG~~~~~-~~~~~~~yd~~~ 225 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPM---IEARKNHGLVFV-KDKIFAVGGQNGLG-GLDNVEYYDIKL 225 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCEETTE-EBCCEEEEETTT
T ss_pred EEECCCCCCCCcccccceEEEeCCCCC--eEEECCCc---cchhhcceEEEE-CCEEEEEeCCCCCC-CCceEEEeeCCC
Confidence 99999977665 899999999999 99999764 445666655554 99999999987664 578999999998
Q ss_pred CCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCC
Q 001901 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGG 397 (998)
Q Consensus 318 ~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~ 397 (998)
+ +|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.+..+
T Consensus 226 ~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------- 281 (306)
T 3ii7_A 226 N---EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKV---------------- 281 (306)
T ss_dssp T---EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEE----------------
T ss_pred C---cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCc----------------
Confidence 8 67777654 78999999999999999999987653 378999999999999999877
Q ss_pred CCccCCCCcceeEEEEECC
Q 001901 398 DAAVELTRRCRHAAAAVGD 416 (998)
Q Consensus 398 ~~~~~p~~R~~hsa~~~~~ 416 (998)
|.+|.+|+++++.+
T Consensus 282 -----~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 282 -----RAFPVTSCLICVVD 295 (306)
T ss_dssp -----ECCSCTTCEEEEEE
T ss_pred -----ccccceeEEEEECC
Confidence 56899999988744
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=319.71 Aligned_cols=258 Identities=22% Similarity=0.336 Sum_probs=218.8
Q ss_pred ecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 82 ~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
+......|.+|.+|+++.+ +++||||||....... ...++++++||+.+++
T Consensus 51 W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~~~-----------------~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 51 WLRLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDG-----------------NTDSSALDCYNPMTNQ 101 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTE-----------------EEECCCEEEEETTTTE
T ss_pred EeECCCCCcccccceEEEE------------CCEEEEECCCcCCCCC-----------------CeecceEEEECCCCCe
Confidence 3445678999999999998 7899999997411000 0167899999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|++++++ |.+|..|++++++++|||+||.... ..++++++||+.++ +|+.+. ++|.+|++|+++++++ +|
T Consensus 102 W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~i 171 (308)
T 1zgk_A 102 WSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERD--EWHLVA---PMLTRRIGVGVAVLNR-LL 171 (308)
T ss_dssp EEECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EE
T ss_pred EeECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCC--eEeECC---CCCccccceEEEEECC-EE
Confidence 9999876 8899999999999999999997543 45689999999987 599997 8899999999999987 89
Q ss_pred EEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeE
Q 001901 242 MAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRW 321 (998)
Q Consensus 242 yv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W 321 (998)
|++||.++...++++++||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+... .+++++.|++.++
T Consensus 172 yv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~v~~yd~~~~--- 241 (308)
T 1zgk_A 172 YAVGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVCV-LHNCIYAAGGYDGQD-QLNSVERYDVETE--- 241 (308)
T ss_dssp EEECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSSS-BCCCEEEEETTTT---
T ss_pred EEEeCCCCCCcCceEEEEeCCCC--eEeeCCCC---CCccccceEEE-ECCEEEEEeCCCCCC-ccceEEEEeCCCC---
Confidence 99999998878999999999999 99999764 45566666554 499999999998655 5899999999987
Q ss_pred EEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCcc
Q 001901 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAV 401 (998)
Q Consensus 322 ~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~ 401 (998)
+|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.++.+
T Consensus 242 ~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~-------------------- 296 (308)
T 1zgk_A 242 TWTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM-------------------- 296 (308)
T ss_dssp EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC--------------------
T ss_pred cEEECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCC--------------------
Confidence 67777654 78999999999999999999987643 378999999999999999877
Q ss_pred CCCCcceeEEEEE
Q 001901 402 ELTRRCRHAAAAV 414 (998)
Q Consensus 402 ~p~~R~~hsa~~~ 414 (998)
|.+|++|+++++
T Consensus 297 -p~~r~~~~~~~l 308 (308)
T 1zgk_A 297 -TSGRSGVGVAVT 308 (308)
T ss_dssp -SSCCBSCEEEEC
T ss_pred -CCCcccceeEeC
Confidence 679999999874
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=342.65 Aligned_cols=242 Identities=18% Similarity=0.198 Sum_probs=190.1
Q ss_pred HhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 001901 687 FSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKV---EY 761 (998)
Q Consensus 687 ~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~---~~ 761 (998)
|++|+++++...+++|||||||++.+|.++|+..++++....+ ....+||||||||||++|+||+.+|++|+. ++
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999999999999999999999876543211 122799999999999999999999999996 79
Q ss_pred CCcEEEeecCccccchhhhc----CChHHHHHHhCCCcchhhhhhh---hhhhcccceeEEEcCeEEEecCCccCccc--
Q 001901 762 PNNVHLIRGNHEAADINALF----GFRIECIERMGERDGIWAWHRI---NRLFNWLPLAALIEKKIICMHGGIGRSIN-- 832 (998)
Q Consensus 762 p~~v~llrGNHE~~~~~~~~----gf~~e~~~~~g~~~~~~~~~~~---~~~f~~LP~aa~i~~~il~vHgGi~~~~~-- 832 (998)
|.++++||||||.+.++..+ +.+..+.+.++.. ...+|..+ .++|+.||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 99999999999999886421 1222222223222 23465544 44556669999887 79999999999764
Q ss_pred --CHHhhhhccCCccc-----CCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccc
Q 001901 833 --HVEQIENLQRPITM-----EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (998)
Q Consensus 833 --~~~~i~~i~rp~~~-----~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (998)
++++|+.+.|+... ... ..++++||+||.. .| .||.....||++++++||+.+++++|||||++
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~-~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~ 288 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKA-DDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTS 288 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHH-SHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSC
T ss_pred CCCHHHHHHHhhhhcccccccccc-CHHHHhccCCCCC-----CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCc
Confidence 89999998886321 111 2568999999865 23 46652246999999999999999999999999
Q ss_pred cccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCc
Q 001901 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (998)
Q Consensus 906 ~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~ 944 (998)
+++ +...+++++|||||+++|. |.+++|.|+++.
T Consensus 289 ~~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~ 322 (342)
T 2z72_A 289 QER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR 322 (342)
T ss_dssp CSS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred ccc-hhhhcCCCEEEEECCCCCC----CcEEEEEEECCE
Confidence 866 6667899999999999994 678888887764
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=325.88 Aligned_cols=267 Identities=18% Similarity=0.257 Sum_probs=220.6
Q ss_pred CCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEec
Q 001901 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (998)
Q Consensus 87 ~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (998)
..|.+|.+|+++++ +++||||||........ .....+++++||+.+++|+.++
T Consensus 31 ~~p~~r~~~~~~~~------------~~~iyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 31 SSQVPKNHVSLVTK------------ENQVFVAGGLFYNEDNK---------------EDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp CCCSCSSEEEEECT------------TCCEEEEEEEEECSSCS---------------SSCEEEEEEEEETTTTEEEECC
T ss_pred CCCCCccceEEEEE------------CCEEEEEcCcccCCCCC---------------ccccccceEEecCCCCeEEECC
Confidence 34779999999987 78999999974221100 0015678999999999999997
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeCCC--CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEE
Q 001901 167 PFGEPPTPRAAHVATAVGTMVVIQGGIG--PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (998)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~lyVfGG~~--~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~ 244 (998)
++ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.+. ++|.+|++|+++++++ +||++
T Consensus 84 ~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~ 154 (315)
T 4asc_A 84 PL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESD---PLPYVVYGHTVLSHMD-LVYVI 154 (315)
T ss_dssp CB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEEE
T ss_pred CC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECC---CCCCcccceeEEEECC-EEEEE
Confidence 76 89999999999999999999975 34567899999999987 599987 8999999999999998 89999
Q ss_pred cCC-CCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001901 245 GGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (998)
Q Consensus 245 GG~-~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w 323 (998)
||. ++...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++|||+||.+... .+++++.|++.++ +|
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 224 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF--EWKELAPM---QTARSLFGATV-HDGRIIVAAGVTDTG-LTSSAEVYSITDN---KW 224 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEEEEECSSS-EEEEEEEEETTTT---EE
T ss_pred eCCCCCCcccceEEEEeCCCC--eEEECCCC---CCchhceEEEE-ECCEEEEEeccCCCC-ccceEEEEECCCC---eE
Confidence 999 56677999999999999 99999765 44566666554 599999999997765 6889999999877 56
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcccCCC----CC-ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCC
Q 001901 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GR-MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (998)
Q Consensus 324 ~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~----~~-~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (998)
..++.+ |.+|..|+++.++++|||+||.+.. +. .....+++|+||+++++|+.+.
T Consensus 225 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------------------- 284 (315)
T 4asc_A 225 APFEAF-PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------------------- 284 (315)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE-------------------
T ss_pred EECCCC-CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc-------------------
Confidence 666554 7899999999999999999998532 11 0123688999999999999983
Q ss_pred CccCCCCcceeEEEEECCEEEEEcC
Q 001901 399 AAVELTRRCRHAAAAVGDLIFIYGG 423 (998)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~LyVfGG 423 (998)
+.+|..|++++++++|||+..
T Consensus 285 ----~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 285 ----REIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ----SCSSCCSSCEEEEEEECGGGS
T ss_pred ----cCCcCccceEEeCCEEEEEEe
Confidence 348999999999999999975
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-34 Score=313.64 Aligned_cols=254 Identities=20% Similarity=0.332 Sum_probs=218.0
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc-
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK- 161 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~- 161 (998)
......|.+|.+|+++.+ +++||+|||..... .++++++||+.+++
T Consensus 44 ~~~~~~p~~r~~~~~~~~------------~~~l~v~GG~~~~~---------------------~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 44 SFLPSITRKRRYVASVSL------------HDRIYVIGGYDGRS---------------------RLSSVECLDYTADED 90 (301)
T ss_dssp EECCCCSSCCBSCEEEEE------------TTEEEEECCBCSSC---------------------BCCCEEEEETTCCTT
T ss_pred EeCCCCChhhccccEEEE------------CCEEEEEcCCCCCc---------------------cCceEEEEECCCCCC
Confidence 344468899999999998 78999999986432 77899999999999
Q ss_pred --EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCc
Q 001901 162 --WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (998)
Q Consensus 162 --W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~ 239 (998)
|+.+..+ |.+|..|++++++++|||+||.... ..++++++||+.++ +|+.+. ++|.+|..|+++++++
T Consensus 91 ~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~- 160 (301)
T 2vpj_A 91 GVWYSVAPM---NVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNID--QWSMLG---DMQTAREGAGLVVASG- 160 (301)
T ss_dssp CCCEEECCC---SSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTT--EEEEEE---ECSSCCBSCEEEEETT-
T ss_pred CeeEECCCC---CCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCC--eEEECC---CCCCCcccceEEEECC-
Confidence 9999766 8999999999999999999998643 45789999999987 599997 7899999999999987
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~ 319 (998)
+||++||.++...++++++||+.++ +|+.+.++ |.+|..|+++ ..+++||++||.+... .+++++.|+..++
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~- 232 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGVA-LLNDHIYVVGGFDGTA-HLSSVEAYNIRTD- 232 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT-
T ss_pred EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceEE-EECCEEEEEeCCCCCc-ccceEEEEeCCCC-
Confidence 8999999998888999999999999 99999654 4556666555 4599999999998665 4889999999877
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 001901 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (998)
Q Consensus 320 ~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (998)
+|..+..+ |.+|..|+++.++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 233 --~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 287 (301)
T 2vpj_A 233 --SWTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSM------------------ 287 (301)
T ss_dssp --EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEE------------------
T ss_pred --cEEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCC------------------
Confidence 55566544 78999999999999999999987543 268899999999999999887
Q ss_pred ccCCCCcceeEEEEEC
Q 001901 400 AVELTRRCRHAAAAVG 415 (998)
Q Consensus 400 ~~~p~~R~~hsa~~~~ 415 (998)
|.+|+.|+++++.
T Consensus 288 ---~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 ---GTQRCDAGVCVLR 300 (301)
T ss_dssp ---EEEEESCEEEEEE
T ss_pred ---CcccccceEEEeC
Confidence 6699999999874
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=318.43 Aligned_cols=249 Identities=18% Similarity=0.288 Sum_probs=209.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCC-----CCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-----GPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~-----~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
++++||+.+++|+. ..+ ..|.+|.+|++++++++|||+||. .......+++++||+.++ +|+.++ ++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS--EWLGMP---PLP 86 (315)
T ss_dssp EEEEEETTTTEEEE-EEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT--EEEECC---CBS
T ss_pred ceEEECCCCCeEec-CCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC--eEEECC---CCC
Confidence 78999999999997 333 236799999999999999999996 223344577999999987 599987 899
Q ss_pred CCCcccEEEEECCcEEEEEcCCC---CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGND---GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~---g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.+|.+|+++++++ +||++||.+ +...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+.
T Consensus 87 ~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPL---PYVVYGHTVLS-HMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCT
T ss_pred cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCC---CCcccceeEEE-ECCEEEEEeCCCC
Confidence 9999999999987 899999974 4667999999999999 99999764 44566665554 6999999999966
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCc
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~ 382 (998)
....+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~- 230 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAGVTDTG----LTSSAEVYSITDNKWAPFEAF- 230 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEEECSSS----EEEEEEEEETTTTEEEEECCC-
T ss_pred CCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEeccCCCC----ccceEEEEECCCCeEEECCCC-
Confidence 6667899999999988 77777765 78999999999999999999987654 267899999999999999876
Q ss_pred CCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC------C---CCcccEEEecccccc
Q 001901 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG------G---VLLDDLLVAEDLAAA 442 (998)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~------~---~~l~Dv~~ld~~~~~ 442 (998)
|.+|..|++++++++|||+||.++ . ..++|+|++|.....
T Consensus 231 --------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp --------------------SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred --------------------CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 679999999999999999999753 1 468999999976543
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=319.82 Aligned_cols=267 Identities=16% Similarity=0.279 Sum_probs=217.7
Q ss_pred CCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEec
Q 001901 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (998)
Q Consensus 87 ~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (998)
..|.||.+|+++.+ +++||||||......... ....+++++||+.+++|++++
T Consensus 42 ~~~~~r~~~~~~~~------------~~~lyv~GG~~~~~~~~~---------------~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 42 AEQIPRNHSSIVTQ------------QNQVYVVGGLYVDEENKD---------------QPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp CTTSCSSEEEEECS------------SSCEEEEESSCC----------------------CCCBEEEEEETTTTEEEECS
T ss_pred CccCCccceEEEEE------------CCEEEEECCcccCccccC---------------CCccccEEEEeCCCCcEEECC
Confidence 45689999999887 789999999643221000 014567999999999999997
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeCCCC-CCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEc
Q 001901 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (998)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~lyVfGG~~~-~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~G 245 (998)
.+ |.+|.+|++++++++|||+||... ....++++++||+.++ +|+.+. ++|.+|++|+++++++ +||++|
T Consensus 95 ~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 165 (318)
T 2woz_A 95 PL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVK---NLPIKVYGHNVISHNG-MIYCLG 165 (318)
T ss_dssp CB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEEC---CCSSCEESCEEEEETT-EEEEEC
T ss_pred CC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECC---CCCCcccccEEEEECC-EEEEEc
Confidence 76 899999999999999999999863 4567899999999987 599997 8999999999999987 899999
Q ss_pred CCC-CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001901 246 GND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (998)
Q Consensus 246 G~~-g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~ 324 (998)
|.+ +...++++|+||+.++ +|+.+.++ |.+|..|+++ +.+++|||+||.+... .+++++.|++.++ +|.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~ 235 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKG--DWKDLAPM---KTPRSMFGVA-IHKGKIVIAGGVTEDG-LSASVEAFDLKTN---KWE 235 (318)
T ss_dssp CEESSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEE-EETTEEEEEEEEETTE-EEEEEEEEETTTC---CEE
T ss_pred CCCCCCCccceEEEEcCCCC--EEEECCCC---CCCcccceEE-EECCEEEEEcCcCCCC-ccceEEEEECCCC---eEE
Confidence 984 4557899999999999 99999754 4556666554 4599999999987654 5789999999877 566
Q ss_pred ECCCCCCCCcceeEEEEECCEEEEEcccCCCCC-----ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 001901 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (998)
Q Consensus 325 ~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~-----~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (998)
.+..+ |.+|..|+++.++++|||+||.+.... .....+++|+||+++++|+++ +
T Consensus 236 ~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~------------------ 294 (318)
T 2woz_A 236 VMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L------------------ 294 (318)
T ss_dssp ECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E------------------
T ss_pred ECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c------------------
Confidence 66654 789999999999999999999865311 012368999999999999998 3
Q ss_pred ccCCCCcceeEEEEECCEEEEEcC
Q 001901 400 AVELTRRCRHAAAAVGDLIFIYGG 423 (998)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyVfGG 423 (998)
+.+|+.|++++++++||||..
T Consensus 295 ---~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 295 ---KEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ---SCCGGGTTCEEEEEEEEGGGC
T ss_pred ---ccccccccceeeCCEEEEEEe
Confidence 448999999999999999853
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=314.93 Aligned_cols=250 Identities=17% Similarity=0.276 Sum_probs=207.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCC-----CCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~-----~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
++++||+.+++|...... .|.||.+|++++++++|||+||.... ....+++++||+.++ +|..++ ++|
T Consensus 25 ~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 97 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLP---PLP 97 (318)
T ss_dssp EEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECS---CBS
T ss_pred ceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECC---CCC
Confidence 478999999999985422 36899999999999999999996321 123456999999987 599987 899
Q ss_pred CCCcccEEEEECCcEEEEEcCCC--CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~--g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~ 303 (998)
.+|+.|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+..
T Consensus 98 ~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 98 SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNL---PIKVYGHNVIS-HNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCC---SSCEESCEEEE-ETTEEEEECCEESS
T ss_pred ccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCC---CCcccccEEEE-ECCEEEEEcCCCCC
Confidence 9999999999987 899999986 4567899999999999 99999754 44566666555 69999999998666
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcC
Q 001901 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~ 383 (998)
...+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 171 ~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-- 240 (318)
T 2woz_A 171 KKCTNRVFIYNPKKG---DWKDLAPM-KTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEF-- 240 (318)
T ss_dssp SCBCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCC--
T ss_pred CCccceEEEEcCCCC---EEEECCCC-CCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCC--
Confidence 667899999999987 55666554 78999999999999999999987643 367899999999999999876
Q ss_pred CCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC---------CCCcccEEEeccccccc
Q 001901 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG---------GVLLDDLLVAEDLAAAE 443 (998)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~---------~~~l~Dv~~ld~~~~~~ 443 (998)
|.+|..|++++++++|||+||.+. ...++|+|++|......
T Consensus 241 -------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 241 -------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp -------------------SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred -------------------CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 668999999999999999999765 24689999999765443
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=350.54 Aligned_cols=293 Identities=14% Similarity=0.160 Sum_probs=235.0
Q ss_pred CCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEe
Q 001901 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (998)
Q Consensus 86 g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l 165 (998)
...|.+|++|+++ + +++||||||... . .++++|+||+.+++|+.+
T Consensus 383 ~~~p~rr~g~~~~-~------------~~~iyv~GG~~~-~---------------------~~~~v~~yd~~~~~W~~~ 427 (695)
T 2zwa_A 383 ECPINRKFGDVDV-A------------GNDVFYMGGSNP-Y---------------------RVNEILQLSIHYDKIDMK 427 (695)
T ss_dssp CCTTCCBSCEEEE-C------------SSCEEEECCBSS-S---------------------BCCCEEEEEECSSCEEEE
T ss_pred CCCCCCceeEEEE-E------------CCEEEEECCCCC-C---------------------CcCcEEEEECCCCeEEEe
Confidence 4577788887766 4 689999999865 2 778999999999999999
Q ss_pred c-C--CCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcE
Q 001901 166 T-P--FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (998)
Q Consensus 166 ~-~--~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~ 240 (998)
. + .+..|.+|.+|+++++ +++|||+||.+.....++++|+||+.++ +|+.+. ++|.+|++|+++++.+++
T Consensus 428 ~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~~---~~p~~R~~h~~~~~~~~~ 502 (695)
T 2zwa_A 428 NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMIK---SLSHTRFRHSACSLPDGN 502 (695)
T ss_dssp ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT--EEEECC---CCSBCCBSCEEEECTTSC
T ss_pred ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC--cEEECC---CCCCCcccceEEEEcCCE
Confidence 8 5 2456999999999999 9999999998766667899999999997 599996 899999999999973448
Q ss_pred EEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-C-CEEEEEeccCCCC-CCcccEEEEecCC
Q 001901 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D-GLLLLCGGRDASS-VPLASAYGLAKHR 317 (998)
Q Consensus 241 Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~-~~lyvfGG~~~~~-~~~~dv~~~~~~~ 317 (998)
||||||.++.. ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||||||.+.+. ..++++|.|++.+
T Consensus 503 iyv~GG~~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 503 VLILGGVTEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp EEEECCBCSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred EEEECCCCCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 99999998765 9999999999 999999877778888888877653 2 8999999986554 5689999999987
Q ss_pred CCeE----EEEECCCCCCCCcceeEEEEEC-CEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCcc
Q 001901 318 DGRW----EWAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSA 392 (998)
Q Consensus 318 ~~~W----~w~~~~g~~P~pR~~hsav~~~-~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~ 392 (998)
+ +| +|..+..+++.+|++|++++++ ++|||+||.+.... ....+++++||+.+++|+.+......
T Consensus 578 ~-~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~-------- 647 (695)
T 2zwa_A 578 E-NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRI-------- 647 (695)
T ss_dssp T-CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHH--------
T ss_pred C-ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeeccccc--------
Confidence 7 43 4666655446899999999999 99999999865432 13478999999999999954322100
Q ss_pred ccCCCCCccCCCCcceeEEEEECC-EEEEEcC----CCCCCCcccEEEeccc
Q 001901 393 DAAGGDAAVELTRRCRHAAAAVGD-LIFIYGG----LRGGVLLDDLLVAEDL 439 (998)
Q Consensus 393 ~~~~~~~~~~p~~R~~hsa~~~~~-~LyVfGG----~~~~~~l~Dv~~ld~~ 439 (998)
....+..|.+|+++.+++ +|||+|| ++-+.++|++|.+|..
T Consensus 648 ------~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 648 ------WEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp ------HHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred ------cCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEE
Confidence 000112678899999877 9999999 3446778899999864
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=286.02 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=191.4
Q ss_pred ccCCCC-CCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 84 KKEDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 84 ~~g~~P-~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
.....| .+|.+|+++++ +++||||||... .... ...++++|+||+.+++
T Consensus 47 ~~~~~p~~~R~~~~~~~~------------~~~lyv~GG~~~~~~~~-----------------~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 47 ALAAFPGGPRDQATSAFI------------DGNLYVFGGIGKNSEGL-----------------TQVFNDVHKYNPKTNS 97 (357)
T ss_dssp ECCCCTTCCCBSCEEEEE------------TTEEEEECCEEECTTSC-----------------EEECCCEEEEETTTTE
T ss_pred ECCCCCCCcCccceEEEE------------CCEEEEEcCCCCCCCcc-----------------ceeeccEEEEeCCCCc
Confidence 344578 89999999999 789999999822 1100 1178999999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCC---------------------------------CCcccEEEEEc
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG---------------------------------LSAEDLHVLDL 208 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~---------------------------------~~~~dv~~~Dl 208 (998)
|+++.++. |.+|.+|++++++++|||+||.+... ..++++++||+
T Consensus 98 W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 98 WVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred EEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 99999884 79999999999999999999975321 24589999999
Q ss_pred CCCCCceEEeeecCCCCCCCc-ccEEEEECCcEEEEEcCCCCC-CCcccEEEEEC--CCCCceEEEcccCCCCCCCccce
Q 001901 209 TQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGK-RPLADVWALDT--AAKPYEWRKLEPEGEGPPPCMYA 284 (998)
Q Consensus 209 ~t~t~~W~~l~~~g~~P~~R~-~hs~~~~~~~~Lyv~GG~~g~-~~lndv~~yD~--~s~~~~W~~v~~~~~~P~~r~~~ 284 (998)
.++ +|+.+. ++|.+|. +|+++++++ +||||||.++. ...+++|+||+ .++ +|+.+.++.. |.. +..
T Consensus 176 ~~~--~W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~-~~~-~~~ 245 (357)
T 2uvk_A 176 STQ--QWSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSS-PDG-VAG 245 (357)
T ss_dssp TTT--EEEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCSST-TTC-CBS
T ss_pred CCC--cEEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCC-Ccc-ccc
Confidence 987 599997 7787655 499999987 89999998653 35789999987 777 9999987632 222 334
Q ss_pred EEEEEeCCEEEEEeccCCC----------------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEE
Q 001901 285 TASARSDGLLLLCGGRDAS----------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (998)
Q Consensus 285 ~a~~~~~~~lyvfGG~~~~----------------~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V 348 (998)
+++++.+++||||||.+.. ...+++++.|++.++ +|+ .+.. .|.+|..|+++.++++|||
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-~W~--~~~~-~p~~r~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-KWD--KSGE-LSQGRAYGVSLPWNNSLLI 321 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CE--EEEE-CSSCCBSSEEEEETTEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-cee--eCCC-CCCCcccceeEEeCCEEEE
Confidence 4556669999999997432 123578899998866 555 4444 4789999999999999999
Q ss_pred EcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 349 ~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
+||.+..+. ..+++++|++++++|.+..+.
T Consensus 322 ~GG~~~~~~---~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 322 IGGETAGGK---AVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEECGGGC---EEEEEEEEEC-CCSCEEEC--
T ss_pred EeeeCCCCC---EeeeEEEEEEcCcEeEeeecc
Confidence 999876543 268999999999999998776
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=285.56 Aligned_cols=200 Identities=21% Similarity=0.340 Sum_probs=161.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCC-CCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPS-TAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~-~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
++++||||||||+.+|.++|+.+++++ .+ .+||||||||||++++||+.+|++| |..+++||||||.+.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d------~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~ 70 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKD------TLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHL 70 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTC------EEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCC------EEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHH
Confidence 368999999999999999999999843 33 7999999999999999999999997 358999999999999
Q ss_pred hhhhcCChHHHHHHhCCC--cchhhhhhhhhhhcccceeEEEcC-eEEEecCCccCcccCHHhhhhccCCccc---CCCC
Q 001901 777 INALFGFRIECIERMGER--DGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITM---EAGS 850 (998)
Q Consensus 777 ~~~~~gf~~e~~~~~g~~--~~~~~~~~~~~~f~~LP~aa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~---~~~~ 850 (998)
++..+||..+.. +..-. .....+..+.++|+.||+++.+++ +++||||||+|.+ ++++++.+.|+++. ....
T Consensus 71 l~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~ 148 (280)
T 2dfj_A 71 LAVFAGISRNKP-KDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSY 148 (280)
T ss_dssp HHHHTTSSCCCG-GGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTH
T ss_pred HhHhcCCcccch-hhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcH
Confidence 999998864211 00000 001134556778888899988887 9999999999996 79999888887652 1122
Q ss_pred cceeccccCCCCCCCCCCCcccCCCCCCceeeCHHH--HHHHHHHcC-CcEEEEcc-cccccceEEec
Q 001901 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR--VMEFCNNND-LQLIVRAH-ECVMDGFERFA 914 (998)
Q Consensus 851 ~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~--~~~fl~~~~-l~~iiR~H-~~~~~G~~~~~ 914 (998)
..++|+||+||. ..|.++.||.+.+.||.++ ..+||+.+| +++++|+| |.+++||+.++
T Consensus 149 ~~~~~~l~~d~~-----~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 149 PFFLDAMYGDMP-----NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp HHHHHHTTCSCC-----CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred HHHHHHhcCCCC-----CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 357899999996 3599999999977899998 578999999 99999999 88999998765
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-27 Score=289.33 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=192.6
Q ss_pred CCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee-e--cCCCCCCCcccEEEEE--CCcEEEEEc
Q 001901 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV-V--QGPGPGPRYGHVMALV--GQRYLMAIG 245 (998)
Q Consensus 171 ~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~-~--~g~~P~~R~~hs~~~~--~~~~Lyv~G 245 (998)
.|.+|++|+++ ++++|||+||.+. ...+++|+||+.+++ |+.+. + .+.+|.+|++|+++++ ++ +|||||
T Consensus 385 ~p~rr~g~~~~-~~~~iyv~GG~~~--~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~G 458 (695)
T 2zwa_A 385 PINRKFGDVDV-AGNDVFYMGGSNP--YRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIG 458 (695)
T ss_dssp TTCCBSCEEEE-CSSCEEEECCBSS--SBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEEC
T ss_pred CCCCceeEEEE-ECCEEEEECCCCC--CCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCC-EEEEEc
Confidence 46667766554 8999999999865 667999999999874 99998 3 4679999999999999 66 899999
Q ss_pred CCCCCC-CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001901 246 GNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (998)
Q Consensus 246 G~~g~~-~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~ 324 (998)
|.++.. .++++|+||+.++ +|+.+.++ |.+|..|+++++.+++||||||.+... +++.|++.++ +|+..
T Consensus 459 G~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~-~W~~~ 528 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE-IFKDV 528 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT-EEEEC
T ss_pred CCCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC-ceEEc
Confidence 998754 7899999999999 99999765 556777877776699999999987655 8999999877 44444
Q ss_pred ECCCCCCCCcceeEEEEEC---CEEEEEcccCCCCCccccCCeEEEEECCCCe------EEEcccCcCCCCCCCCccccC
Q 001901 325 IAPGVSPSPRYQHAAVFVN---ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV------WCDTKSVVTSPRTGRYSADAA 395 (998)
Q Consensus 325 ~~~g~~P~pR~~hsav~~~---~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~------W~~v~~~~~~p~~~~~~~~~~ 395 (998)
...+..|.+|.+|++++++ ++|||+||....+. ...+++|+||+.+++ |+.+..++
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p------------- 593 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP------------- 593 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG-------------
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC-------------
Confidence 4334468899999988877 89999999865432 247899999999999 88887641
Q ss_pred CCCCccCCCCcceeEEEEEC-CEEEEEcCCCCC---CCcccEEEecccccccc
Q 001901 396 GGDAAVELTRRCRHAAAAVG-DLIFIYGGLRGG---VLLDDLLVAEDLAAAET 444 (998)
Q Consensus 396 ~~~~~~~p~~R~~hsa~~~~-~~LyVfGG~~~~---~~l~Dv~~ld~~~~~~~ 444 (998)
+.+|++|++++++ ++|||+||.++. ..+++++++|.......
T Consensus 594 -------~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 594 -------LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp -------GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred -------CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 3589999999999 999999998754 36899999997764443
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=288.53 Aligned_cols=275 Identities=15% Similarity=0.099 Sum_probs=203.0
Q ss_pred CCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecC
Q 001901 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (998)
Q Consensus 88 ~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~ 167 (998)
.|.||.+|+++++.. +++||++||........ ......++++||+.+++|+.+..
T Consensus 182 ~~~P~~~~~~av~~~----------~g~l~v~GG~~~~~~~~---------------~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 182 IDLPIVPAAAAIEPT----------SGRVLMWSSYRNDAFGG---------------SPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp EECSSCCSEEEEETT----------TTEEEEEEECCCTTTCS---------------CCCSEEEEEEECTTTCCBCCCEE
T ss_pred ccCCCCceeEEEEec----------CCEEEEEeccccccccc---------------CCCCeEEEEEEeCCCCcEEeCcc
Confidence 357788888887732 58999999986532100 00134589999999999999877
Q ss_pred CCCCCCCccceE--EEE-eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEE
Q 001901 168 FGEPPTPRAAHV--ATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (998)
Q Consensus 168 ~g~~P~pR~~hs--a~~-~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~ 244 (998)
+ |.+|..|+ +++ .+++||++||... .++++||+.++ +|+.+. ++|.+|+.|+++++.+++|||+
T Consensus 237 ~---~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~--~W~~~~---~~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 237 T---VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSD--SWIPGP---DMQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp E---ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGT--EEEECC---CCSSCCSSCEEEECTTSCEEEE
T ss_pred c---CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCC--ceeECC---CCCccccccceEEecCCeEEEE
Confidence 6 56665553 444 4789999999753 37999999987 599987 8999999999999944489999
Q ss_pred cC-CCCCCCcccEEEEECCCCCceEEEcccCC-----CC-----------------------------------------
Q 001901 245 GG-NDGKRPLADVWALDTAAKPYEWRKLEPEG-----EG----------------------------------------- 277 (998)
Q Consensus 245 GG-~~g~~~lndv~~yD~~s~~~~W~~v~~~~-----~~----------------------------------------- 277 (998)
|| .++...++++++||+.++ +|+.+.... ..
T Consensus 304 GG~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred eCcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 99 566678899999999999 999973211 10
Q ss_pred -------------CCCccceEEEE--EeCCEEEEEeccCCC--CCCcc---cEEEEecCCCCeEEEEECCCCCCCCccee
Q 001901 278 -------------PPPCMYATASA--RSDGLLLLCGGRDAS--SVPLA---SAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337 (998)
Q Consensus 278 -------------P~~r~~~~a~~--~~~~~lyvfGG~~~~--~~~~~---dv~~~~~~~~~~W~w~~~~g~~P~pR~~h 337 (998)
++++..+++++ ..+++||+|||.+.. ...++ .++.|++..+ +|..... +.+|.+|..|
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~-~~mp~~R~~~ 459 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFAS-NGLYFARTFH 459 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEECT-TCCSSCCBSC
T ss_pred eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEcc-CCCCCCcccC
Confidence 11123344443 258999999997431 12334 5667777655 5554432 3457999999
Q ss_pred EEEEE-CCEEEEEcccCCCCC--ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE
Q 001901 338 AAVFV-NARLHVSGGALGGGR--MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (998)
Q Consensus 338 sav~~-~~~L~V~GG~~~~~~--~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (998)
+++++ +++|||+||.+.... .....+++++||+++++|+.+..+ +.+|.+|+++++
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~---------------------~~~R~~hs~a~l 518 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLL 518 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEE
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC---------------------CCccccccHhhc
Confidence 98888 999999999763210 113468899999999999998776 669999999888
Q ss_pred --CCEEEEEcCCC
Q 001901 415 --GDLIFIYGGLR 425 (998)
Q Consensus 415 --~~~LyVfGG~~ 425 (998)
+++|||+||..
T Consensus 519 l~dg~v~v~GG~~ 531 (656)
T 1k3i_A 519 LPDGRVFNGGGGL 531 (656)
T ss_dssp CTTSCEEEEECCC
T ss_pred CCCcEEEecCCCC
Confidence 99999999953
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-23 Score=228.58 Aligned_cols=185 Identities=19% Similarity=0.324 Sum_probs=127.7
Q ss_pred HHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 001901 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (998)
Q Consensus 685 ~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~ 763 (998)
.+|.++++++++..+++|||||||++.+|.++|+.++.... + .+||+|||||||++++|++.+|..+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 46788999999999999999999999999999999987643 3 7999999999999999999999875
Q ss_pred cEEEeecCccccchhhhcCChHH-HHHHhCCCcc-----hhhhhhhhhhhcccceeEEEc-CeEEEecCCccCccc----
Q 001901 764 NVHLIRGNHEAADINALFGFRIE-CIERMGERDG-----IWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSIN---- 832 (998)
Q Consensus 764 ~v~llrGNHE~~~~~~~~gf~~e-~~~~~g~~~~-----~~~~~~~~~~f~~LP~aa~i~-~~il~vHgGi~~~~~---- 832 (998)
.+++|+||||...++..+++..+ +..+++.... ..+.....++|+.||+++.++ ++++|||||+.|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999999888887654 3444443211 123456678888999999886 599999999988653
Q ss_pred CHHhhhhccCCcc---cCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHH
Q 001901 833 HVEQIENLQRPIT---MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885 (998)
Q Consensus 833 ~~~~i~~i~rp~~---~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~ 885 (998)
..+++..+.+... .+..+ ..++|+||... ....|..+.||...++||+.
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~-~~~~w~~~~~g~~~vvfGHt 205 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETND-GGKPWASMWRGPETVVFGHD 205 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTT-CCEEGGGGCCCSSEEEECCC
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCc-CCCChhhccCCCCEEEECCC
Confidence 2333333332211 11122 14789999542 34567666666554455443
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=243.45 Aligned_cols=249 Identities=13% Similarity=0.110 Sum_probs=181.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCC-----CCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~-----~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
++..||+.+++|+.+.++ ||..|+++++ +++|||+||..... ...+++++||+.+++ |+.+. .
T Consensus 167 ~~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~---~ 236 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRT---V 236 (656)
T ss_dssp CCCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCE---E
T ss_pred ccccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCc---c
Confidence 355678889999998754 4566666766 88999999975432 134589999999984 99887 5
Q ss_pred CCCCCcccE--EEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001901 224 GPGPRYGHV--MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (998)
Q Consensus 224 ~P~~R~~hs--~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~ 301 (998)
+|.+|..|+ ++++.+++||++||.+.. ++++||+.++ +|+++.++ |.+|.+|+++++.+++||++||..
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~--~W~~~~~~---~~~R~~~s~~~~~dg~iyv~GG~~ 307 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD--SWIPGPDM---QVARGYQSSATMSDGRVFTIGGSW 307 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT--EEEECCCC---SSCCSSCEEEECTTSCEEEECCCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC--ceeECCCC---CccccccceEEecCCeEEEEeCcc
Confidence 677776654 555555589999998653 8999999999 99999765 445777766666699999999954
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECC---CCC------------------------------------------------
Q 001901 302 ASSVPLASAYGLAKHRDGRWEWAIAP---GVS------------------------------------------------ 330 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~~~W~w~~~~---g~~------------------------------------------------ 330 (998)
.....+++++.|++.++ +|+..... +++
T Consensus 308 ~~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 308 SGGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CSSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred cCCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 44446889999998876 56544211 110
Q ss_pred --------CCCcceeEEEE---ECCEEEEEcccCCCCCccccCC---eEEEEECCCCeEEEcc--cCcCCCCCCCCcccc
Q 001901 331 --------PSPRYQHAAVF---VNARLHVSGGALGGGRMVEDSS---SVAVLDTAAGVWCDTK--SVVTSPRTGRYSADA 394 (998)
Q Consensus 331 --------P~pR~~hsav~---~~~~L~V~GG~~~~~~~~~~~~---dv~vyD~~t~~W~~v~--~~~~~p~~~~~~~~~ 394 (998)
+.++..++++. ++++|||+||....... ...+ .+++||+.+++|..+. .+
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~-~~~~~~~~v~~yd~~~~~W~~~~~~~m------------- 452 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS-DATTNAHIITLGEPGTSPNTVFASNGL------------- 452 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS-BCCCCEEEEECCSTTSCCEEEECTTCC-------------
T ss_pred ccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC-CcCCcceEEEcCCCCCCCeeEEccCCC-------------
Confidence 01123345553 48999999997532111 1234 7999999999999886 44
Q ss_pred CCCCCccCCCCcceeEEEEE-CCEEEEEcCCCC------CCCcccEEEeccccc
Q 001901 395 AGGDAAVELTRRCRHAAAAV-GDLIFIYGGLRG------GVLLDDLLVAEDLAA 441 (998)
Q Consensus 395 ~~~~~~~~p~~R~~hsa~~~-~~~LyVfGG~~~------~~~l~Dv~~ld~~~~ 441 (998)
|.+|..|+++++ +++|||+||.+. ...+++++++|....
T Consensus 453 --------p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 453 --------YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp --------SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred --------CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 679999999998 999999999652 356889999987553
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.76 E-value=6.6e-20 Score=194.30 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=93.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+++|||||||++.+|.++|+.++.....+ .+||+|||||||+++.|++.+|.. ..+++|+||||.+.+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 689999999999999999999998753221 789999999999999999988754 379999999999887
Q ss_pred hhhcCChHH-HHHHhCCC-------cchhhhhhhhhhhcccceeEEE---cCeEEEecCCccCc
Q 001901 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (998)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LP~aa~i---~~~il~vHgGi~~~ 830 (998)
+..+++... .+...+.. ....+++.+.++|+.||+++++ +.+++|||||+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 765433211 12222211 1123557788999999999877 57999999999765
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=5.7e-13 Score=143.27 Aligned_cols=189 Identities=19% Similarity=0.157 Sum_probs=125.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.++.++|||||++.+|.++++.+. ..+ .++++||++|+|+++.|++.+|..++ .+++++||||....
T Consensus 4 mri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~ 70 (246)
T 3rqz_A 4 MRILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACI 70 (246)
T ss_dssp CCEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHT
T ss_pred cEEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHh
Confidence 579999999999999999999987 222 79999999999999999999999984 37999999998776
Q ss_pred hhhcC--Ch---HHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcc
Q 001901 778 NALFG--FR---IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIV 852 (998)
Q Consensus 778 ~~~~g--f~---~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~ 852 (998)
..... +. .+... + ....+.....+++..||.....+ +++++||++....
T Consensus 71 ~~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~--------------------- 124 (246)
T 3rqz_A 71 GRLSLDEFNPVARFASY-W---TTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI--------------------- 124 (246)
T ss_dssp CCCCCC--CGGGGCHHH-H---HHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT---------------------
T ss_pred ccCCccccCHHHHHHHH-H---HHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc---------------------
Confidence 54322 10 00000 0 01123355667888999886655 8999999864210
Q ss_pred eeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEE--------------------
Q 001901 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-------------------- 912 (998)
Q Consensus 853 ~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~-------------------- 912 (998)
| . +.+....+.+.++..+.+++|-||.=.+..+..
T Consensus 125 -----~----~----------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l 179 (246)
T 3rqz_A 125 -----W----E----------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV 179 (246)
T ss_dssp -----T----C----------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC
T ss_pred -----c----c----------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec
Confidence 0 0 112345566777888899999999876544331
Q ss_pred ecCCeEEEEeccccccCCCCCeEEEEEEcCC-ceEEeEEe
Q 001901 913 FAQGHLITLFSATNYCGTANNAGAILVLGRD-LVVVPKLI 951 (998)
Q Consensus 913 ~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~-~~~~~~~~ 951 (998)
..+..+|..=|.-.-- .....+++++++.+ ..++++.+
T Consensus 180 ~~g~~ivNpGSVG~Pr-dg~p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 180 SSGRYIINPGAVGQPR-DGDPRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp SSSCEEEEECCSSCCC-SSCCSEEEEEEEGGGTEEEEEEE
T ss_pred CCCeEEEECCccCCCC-CcCCcceEEEEECCCCEEEEEEe
Confidence 1134455555542211 13456888888754 34555444
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.37 E-value=6e-12 Score=135.43 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=121.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcC---CC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYG---SP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g---~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 772 (998)
.++.+||||||++..|.++++.+. .. ..+ .+|++||++|+|+++.|++.+|..|+... .+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecch
Confidence 468999999999999999998765 32 112 79999999999999999999999987543 499999999
Q ss_pred cccchhhhcCCh-----------HHHHHHhCCCcchhhhhhhhhhhcccceeEEE--cC-eEEEecCCccCcccCHHhhh
Q 001901 773 EAADINALFGFR-----------IECIERMGERDGIWAWHRINRLFNWLPLAALI--EK-KIICMHGGIGRSINHVEQIE 838 (998)
Q Consensus 773 E~~~~~~~~gf~-----------~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i--~~-~il~vHgGi~~~~~~~~~i~ 838 (998)
|.........+. ......+ ......+-....++++.||....+ ++ +|+++||++....
T Consensus 74 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~------- 145 (252)
T 1nnw_A 74 DQIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF------- 145 (252)
T ss_dssp HHHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT-------
T ss_pred HHHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc-------
Confidence 987654321110 0000000 000111234455778888887654 33 8999999862110
Q ss_pred hccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHc-CCcEEEEcccccccceEEecCCe
Q 001901 839 NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNN-DLQLIVRAHECVMDGFERFAQGH 917 (998)
Q Consensus 839 ~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~~~~~ 917 (998)
. +.+|. . -+.+.+.++++.. +.+++|-||.-....... ++.
T Consensus 146 ----------~-----~~~~~-------------~--------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~ 187 (252)
T 1nnw_A 146 ----------D-----GEVLA-------------E--------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYG 187 (252)
T ss_dssp ----------T-----CCCCS-------------S--------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTE
T ss_pred ----------c-----cccCC-------------C--------CCHHHHHHHHhcCCCCCEEEECCccccceEec--CCe
Confidence 0 00110 0 1235677788887 999999999987554432 453
Q ss_pred E-EEEeccccccCCCCCeEEEEEEcC-CceEEeEEe
Q 001901 918 L-ITLFSATNYCGTANNAGAILVLGR-DLVVVPKLI 951 (998)
Q Consensus 918 ~-iTvfSa~~y~~~~~n~ga~l~~~~-~~~~~~~~~ 951 (998)
+ |..=| ..+.-.....+++++++- +..+.+..+
T Consensus 188 ~~in~Gs-~~~~~~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 188 RVVCPGS-VGFPPGKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp EEEEECC-SSSCSSSSCCEEEEEEETTTCCEEEEEE
T ss_pred EEEECCC-ccCCCCCCCcceEEEEECCCCeEEEEEe
Confidence 3 22212 111111122567777754 355555444
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=5.9e-12 Score=137.20 Aligned_cols=119 Identities=16% Similarity=0.087 Sum_probs=87.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+|.||+||||++..|.++|+.+.....+ .+||+||+|++|+++.||+.+|.+++ .+++++||||...+
T Consensus 12 ~~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~ 80 (270)
T 3qfm_A 12 TKIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLW 80 (270)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHH
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHH
Confidence 36899999999999999999987644333 79999999999999999999998873 58999999999877
Q ss_pred hhhc---CChHHHHHHhC---CCcchhhhhhhhhhhcccceeEEE--c-CeEEEecCCc
Q 001901 778 NALF---GFRIECIERMG---ERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGI 827 (998)
Q Consensus 778 ~~~~---gf~~e~~~~~g---~~~~~~~~~~~~~~f~~LP~aa~i--~-~~il~vHgGi 827 (998)
.... +|.......+. ......+.....++++.||....+ + .+|+++||-.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 81 HGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp HHHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred HhhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 6433 33222111100 001122445667889999998755 3 3899999654
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.65 E-value=4e-08 Score=102.64 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCcEEEee
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ--------HSLETITLLLALKVEYPNNVHLIR 769 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~--------~s~evl~ll~~lk~~~p~~v~llr 769 (998)
.++.+++|+||++..|.++++.+.....+ .+|++||++|+|+ ...+++.+|..++ ..+++++
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~ 95 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVR 95 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEE
Confidence 57999999999999999998876422222 7999999999998 4688999988875 3699999
Q ss_pred cCccccc
Q 001901 770 GNHEAAD 776 (998)
Q Consensus 770 GNHE~~~ 776 (998)
||||...
T Consensus 96 GNHD~~~ 102 (208)
T 1su1_A 96 GNCDSEV 102 (208)
T ss_dssp CTTCCHH
T ss_pred CCCchHH
Confidence 9999854
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.61 E-value=6.5e-07 Score=91.97 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.++.+++|+||++..|.++++.+.....+ .+|++||++|. +++..|..+ +..+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 57999999999999999999876432222 68999999984 566666543 3479999999998654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=98.55 E-value=1e-06 Score=92.25 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=53.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
.+|.+++|+|+++..|.++++.+.....+ -+|++||++|+|...-++..++-.|+.. +..+++++||||...
T Consensus 6 mri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSH
T ss_pred EEEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchh
Confidence 57999999999999988888765321122 6899999999997665555555555432 345999999999854
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.4e-07 Score=93.13 Aligned_cols=62 Identities=23% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCeEEEecCCC--CHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHG--QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG--~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.++.+++|+|| +...|.++++.+. ...+ .+|++||++|+ +++.+|..+. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 47999999997 7778888887753 2222 68999999984 7888888763 3699999999975
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.6e-05 Score=83.23 Aligned_cols=119 Identities=22% Similarity=0.348 Sum_probs=78.7
Q ss_pred CCeEEEecCCCCHH------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecC
Q 001901 698 APIKIFGDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771 (998)
Q Consensus 698 ~~i~vvGDiHG~~~------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGN 771 (998)
.++.+++|+|+++. .|.++++. ...+ .+|++||++| .+++.+|..+. ..+++++||
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~---~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GN 87 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLAT---DKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGD 87 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHC---TTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCCT
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhc---CCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecCC
Confidence 57999999999863 33334331 1122 6899999998 57888877763 369999999
Q ss_pred ccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEE--c-CeEEEecCCccCcccCHHhhhhccCCcccCC
Q 001901 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITMEA 848 (998)
Q Consensus 772 HE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~ 848 (998)
||....... .+++..||....+ + .+|+++||.... |
T Consensus 88 HD~~~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~-------------~----- 126 (215)
T 2a22_A 88 LDSAIFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVL-------------P----- 126 (215)
T ss_dssp TCCSCCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTSS-------------S-----
T ss_pred CcCcccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCccC-------------C-----
Confidence 998654310 0123456654333 2 389999986411 0
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccc
Q 001901 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (998)
Q Consensus 849 ~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (998)
| .+.+.+.++++..+.++++-||.-..
T Consensus 127 ---------~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 127 ---------W-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp ---------T-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred ---------C-----------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 0 13456677788889999999998653
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.27 E-value=4.5e-06 Score=84.44 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=43.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.++.+++|+||++..|.++++.+.. ..+ .++++||+.- +++. .++ ..+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 4699999999999999999998753 222 6899999731 2222 221 2699999999975
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.17 E-value=5.3e-06 Score=85.31 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=48.2
Q ss_pred CCeEEEecCCCCHHHH-------------HHHHHHcCC--CCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC
Q 001901 698 APIKIFGDLHGQFGDL-------------MRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL-------------~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p 762 (998)
.++.+++|+|+....+ .++++.+.. ...+ .+|++||++++|+...+++.+|..+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~---- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP---- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----
Confidence 5789999999644322 223333221 1222 68999999999977778888887763
Q ss_pred CcEEEeecCccccc
Q 001901 763 NNVHLIRGNHEAAD 776 (998)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (998)
..+++++||||...
T Consensus 72 ~~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 72 GRKILVMGNHDKDK 85 (195)
T ss_dssp SEEEEECCTTCCCH
T ss_pred CCEEEEeCCCCCch
Confidence 35999999999854
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=97.96 E-value=6.6e-05 Score=83.10 Aligned_cols=71 Identities=18% Similarity=0.280 Sum_probs=47.2
Q ss_pred CCeEEEecCCC------------CHHHHHHHHHHcCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhcC
Q 001901 698 APIKIFGDLHG------------QFGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVEY 761 (998)
Q Consensus 698 ~~i~vvGDiHG------------~~~dL~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~~ 761 (998)
.+|.+++|+|. ....|.++++.+.. ...+ -+|++||++|.|... .+ +..+|-.|....
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 46999999996 26677777776642 2222 688999999998742 22 223333332222
Q ss_pred CCcEEEeecCccc
Q 001901 762 PNNVHLIRGNHEA 774 (998)
Q Consensus 762 p~~v~llrGNHE~ 774 (998)
.-.+++++||||.
T Consensus 100 ~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 100 GAELVWVMGNHDD 112 (330)
T ss_dssp TCEEEECCCTTSC
T ss_pred CCCEEEeCCCCCC
Confidence 3459999999997
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=97.93 E-value=1.3e-05 Score=82.14 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=43.9
Q ss_pred CCeEEEecCCCCHH--HHHHHHHH-cCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFG--DLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~--dL~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.++.+++|+|++.. ++.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~ 75 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 75 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCc
Confidence 57999999999742 23333322 2211112 6889999997 67888877663 369999999997
Q ss_pred cc
Q 001901 775 AD 776 (998)
Q Consensus 775 ~~ 776 (998)
..
T Consensus 76 ~~ 77 (192)
T 1z2w_A 76 NL 77 (192)
T ss_dssp CT
T ss_pred cc
Confidence 54
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=7.3e-06 Score=87.78 Aligned_cols=73 Identities=8% Similarity=0.096 Sum_probs=51.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--------------------------HHHH
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------------------------LETI 751 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------------------------~evl 751 (998)
.+|.+++|||+++..|.++++.+.....+ -+|++||++|+|..+ -+..
T Consensus 6 mri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 6 RKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHH
Confidence 57999999999999998888776322222 689999999999652 1233
Q ss_pred HHHHHhhhcCCCcEEEeecCccccch
Q 001901 752 TLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 752 ~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+|-.|+. .+..+++++||||....
T Consensus 80 ~~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 80 KFFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHHh-cCCcEEEEcCCCCchhh
Confidence 34444433 23469999999998643
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00053 Score=73.52 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=46.3
Q ss_pred CeEEEecCCCCH------------HHHHHHHHHcCCC--CCCCCccceeEEEeccccCCCCCh-H-HHHHHHHHhhhcCC
Q 001901 699 PIKIFGDLHGQF------------GDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHS-L-ETITLLLALKVEYP 762 (998)
Q Consensus 699 ~i~vvGDiHG~~------------~dL~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s-~-evl~ll~~lk~~~p 762 (998)
+|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|... . ++..+|..| +
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l----~ 71 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL----N 71 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----S
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----C
Confidence 589999999984 6788888776432 112 688999999998743 1 222222222 3
Q ss_pred CcEEEeecCcccc
Q 001901 763 NNVHLIRGNHEAA 775 (998)
Q Consensus 763 ~~v~llrGNHE~~ 775 (998)
-.+++++||||..
T Consensus 72 ~p~~~v~GNHD~~ 84 (274)
T 3d03_A 72 YPLYLIPGNHDDK 84 (274)
T ss_dssp SCEEEECCTTSCH
T ss_pred CCEEEECCCCCCH
Confidence 3599999999984
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00045 Score=75.38 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=43.1
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.+|++++|+||+...| .++..+ -+|++||++|+|... .+++.+|..+. + ..++++.||||..
T Consensus 60 mri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 60 TRFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELT 123 (296)
T ss_dssp EEEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGG
T ss_pred eEEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCcccc
Confidence 4799999999997643 223322 688999999999742 22344444332 1 2489999999985
Q ss_pred c
Q 001901 776 D 776 (998)
Q Consensus 776 ~ 776 (998)
.
T Consensus 124 ~ 124 (296)
T 3rl5_A 124 F 124 (296)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.12 Score=54.62 Aligned_cols=185 Identities=17% Similarity=0.100 Sum_probs=116.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||+-.|..+. +.+..+|+.+++-..-... |..-.+.+++..+++||+...
T Consensus 30 ~~~LyestG~~g~------------------------S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 30 RGHLYESTGETGR------------------------SSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TTEEEEEECCTTS------------------------CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe
Confidence 6799999996543 3788999999886655444 444567888999999999865
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
. .+.+++||..+.. .+. ..+.+..+.+++.-++ .||+.=| .+.++.+|+.+.. .-..+.
T Consensus 83 ~------~~~v~v~D~~tl~----~~~---ti~~~~~Gwglt~dg~-~L~vSdg------s~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 83 R------NHEGFVYDLATLT----PRA---RFRYPGEGWALTSDDS-HLYMSDG------TAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp S------SSEEEEEETTTTE----EEE---EEECSSCCCEEEECSS-CEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred e------CCEEEEEECCcCc----EEE---EEeCCCCceEEeeCCC-EEEEECC------CCeEEEEeCCCCe-EEEEEE
Confidence 3 3689999998852 222 2233345677765554 7888654 3579999999873 112222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC--------cceeEEEEE--
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP--------RYQHAAVFV-- 342 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~p--------R~~hsav~~-- 342 (998)
.. ..+.+-..--.....+++||+--- ..+++..+|+.+...-.|..+.+..|.. -.-.+.+..
T Consensus 142 V~-~~g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 142 VT-AGGRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CE-ETTEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred Ec-cCCcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 21 111111222223345889886532 2467888888876566777777543221 133445554
Q ss_pred CCEEEEEccc
Q 001901 343 NARLHVSGGA 352 (998)
Q Consensus 343 ~~~L~V~GG~ 352 (998)
+++|||.|=.
T Consensus 215 ~~~lfVTGK~ 224 (243)
T 3mbr_X 215 HDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4789998754
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00065 Score=75.77 Aligned_cols=77 Identities=25% Similarity=0.303 Sum_probs=46.4
Q ss_pred Ceeeec-CCeEEEecCC-C----C-----------HHHHHHHHHHcCCCCCCCCccceeEEEecc-ccCCCCChHHH---
Q 001901 692 SVLQLK-APIKIFGDLH-G----Q-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGD-YVDRGQHSLET--- 750 (998)
Q Consensus 692 ~~l~~~-~~i~vvGDiH-G----~-----------~~dL~~il~~~g~~~~~~~~~~~~~vfLGD-yVDRG~~s~ev--- 750 (998)
-++... .+++.++|+| | . ...|.++++.+.-...+ -+|+.|| ++|++..+.+.
T Consensus 12 ~~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~ 85 (336)
T 2q8u_A 12 HVINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHD 85 (336)
T ss_dssp CCTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHH
T ss_pred hheecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHH
Confidence 344443 5799999999 8 3 34455555544221222 5889999 99999877664
Q ss_pred -HHHHHHhhhcCCCcEEEeecCccccc
Q 001901 751 -ITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 751 -l~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
..+|..|+.. -.|+++.||||...
T Consensus 86 ~~~~l~~L~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 86 LLDYLKRMMRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHHHHHHHHHH--SCEEECCC------
T ss_pred HHHHHHHHHhc--CCEEEECCCCCccc
Confidence 4455555432 35999999999865
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00043 Score=75.80 Aligned_cols=72 Identities=19% Similarity=0.179 Sum_probs=48.0
Q ss_pred CCeEEEecCCCCH-------------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC----hHHHHHHH
Q 001901 698 APIKIFGDLHGQF-------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH----SLETITLL 754 (998)
Q Consensus 698 ~~i~vvGDiHG~~-------------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~----s~evl~ll 754 (998)
.++.+++|+|... ..|.++++.+.....+ -+|++||++|.|.. ..+.+..+
T Consensus 6 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~ 79 (322)
T 2nxf_A 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTV 79 (322)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHH
T ss_pred eEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHH
Confidence 3589999999875 5566666655322222 68999999998751 23444434
Q ss_pred HHhhhcCCCcEEEeecCcccc
Q 001901 755 LALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 755 ~~lk~~~p~~v~llrGNHE~~ 775 (998)
+.+-...+..++++.||||..
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHH
T ss_pred HHHHHhcCCcEEEecCCCCcc
Confidence 333333455799999999985
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0013 Score=74.94 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=48.7
Q ss_pred CCeEEEecCCCCH-------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHH----HHHHHHhhhc
Q 001901 698 APIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET----ITLLLALKVE 760 (998)
Q Consensus 698 ~~i~vvGDiHG~~-------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev----l~ll~~lk~~ 760 (998)
.+|.+++|+|+.. ..|.++++.+.....+ -+|+.||++|++..+.+. +.+|..|+.
T Consensus 21 mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~- 93 (386)
T 3av0_A 21 MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHE- 93 (386)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-
T ss_pred eEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-
Confidence 5799999999762 3466777665332222 688999999999554433 344444432
Q ss_pred CCCcEEEeecCccccc
Q 001901 761 YPNNVHLIRGNHEAAD 776 (998)
Q Consensus 761 ~p~~v~llrGNHE~~~ 776 (998)
.+-.|+++.||||...
T Consensus 94 ~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPR 109 (386)
T ss_dssp TTCEEEECCCGGGSCS
T ss_pred cCCcEEEEcCCCCCCc
Confidence 2346999999999854
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0014 Score=73.04 Aligned_cols=70 Identities=21% Similarity=0.235 Sum_probs=45.5
Q ss_pred CeEEEecCCCCH-------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHH----HHHHhhhcC
Q 001901 699 PIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIT----LLLALKVEY 761 (998)
Q Consensus 699 ~i~vvGDiHG~~-------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~----ll~~lk~~~ 761 (998)
++++++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+. .
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~ 74 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE-H 74 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-C
Confidence 588999999874 3445555544222222 68899999999855544433 3333432 2
Q ss_pred CCcEEEeecCcccc
Q 001901 762 PNNVHLIRGNHEAA 775 (998)
Q Consensus 762 p~~v~llrGNHE~~ 775 (998)
.-.|+++.||||..
T Consensus 75 ~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCcCCCc
Confidence 23599999999985
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.38 Score=52.65 Aligned_cols=183 Identities=11% Similarity=-0.009 Sum_probs=99.9
Q ss_pred CcEEEEECCCCcEE-EecCCCCCCCCccceEEEE-eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC-
Q 001901 150 ADVHCYDVLTNKWS-RITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG- 226 (998)
Q Consensus 150 ~dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~- 226 (998)
+.+.++|+.+.+-. ++... .. -+.++. -++++||.... .+.++++|+.+....+ .+. .+....
T Consensus 64 ~~v~viD~~t~~~~~~i~~~---~~---p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~-~i~-~g~~~~~ 129 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF---TS---PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITG-YIE-CPDMDME 129 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC---SS---EEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEE-EEE-CTTCCTT
T ss_pred CEEEEEECcccEEEEEcCCC---CC---CcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEE-EEE-cCCcccc
Confidence 47899999988763 34321 22 234444 56799998742 3679999998863112 222 222000
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~ 306 (998)
...-+.+++.+ ++||+..-. .-+.+.++|+.+. +....-..+..| +..+...++++|+..........
T Consensus 130 ~~~p~~i~~~~-~~lyv~~~~----~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 130 SGSTEQMVQYG-KYVYVNCWS----YQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp TCBCCCEEEET-TEEEEEECT----TCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCS
T ss_pred CCCcceEEEEC-CEEEEEcCC----CCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCc
Confidence 00223444444 489987421 1357999999988 544332222222 22233447888887532211111
Q ss_pred ----cccEEEEecCCCCeEEE-EECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 307 ----LASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 307 ----~~dv~~~~~~~~~~W~w-~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.+.++.++..+. +... ...+ ....-..+++. ++.||+..+ .++++|+.+.+.
T Consensus 198 ~~~~~~~v~~id~~t~-~v~~~~~~~----~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETF-TVEKQFKFK----LGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SCBCCCEEEEEETTTT-EEEEEEECC----TTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred cccCCceEEEEECCCC-eEEEEEecC----CCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 256888887654 3322 1221 12223345555 567888632 489999998875
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.78 Score=50.05 Aligned_cols=230 Identities=8% Similarity=-0.043 Sum_probs=124.2
Q ss_pred CCcEEEEECCCCcEEEecCC--CCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPF--GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~--g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+..||+.++++..--.. ...+.....+.++..++++|+.... .+.+.++|..+.... .++. ..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~-~~i~---~~-- 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEV-GRIT---GF-- 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEE-EEEE---CC--
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEE-EEcC---CC--
Confidence 35788999999988652110 0113334556777788999998752 357999999886411 2232 11
Q ss_pred CCcccEEEE-ECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001901 227 PRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (998)
Q Consensus 227 ~R~~hs~~~-~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~ 305 (998)
..-+.+++ -++ ++|+.... -+.+.++|+.+....++. . .+........-..+++.++++|+..-.
T Consensus 84 -~~p~~i~~~~~g-~lyv~~~~-----~~~v~~iD~~t~~~~~~i-~-~g~~~~~~~~p~~i~~~~~~lyv~~~~----- 149 (328)
T 3dsm_A 84 -TSPRYIHFLSDE-KAYVTQIW-----DYRIFIINPKTYEITGYI-E-CPDMDMESGSTEQMVQYGKYVYVNCWS----- 149 (328)
T ss_dssp -SSEEEEEEEETT-EEEEEEBS-----CSEEEEEETTTTEEEEEE-E-CTTCCTTTCBCCCEEEETTEEEEEECT-----
T ss_pred -CCCcEEEEeCCC-eEEEEECC-----CCeEEEEECCCCeEEEEE-E-cCCccccCCCcceEEEECCEEEEEcCC-----
Confidence 22234444 444 89997643 357999999988333322 1 111000000111122378999998421
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCC-ccccCCeEEEEECCCCeEEEcccCcC
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-MVEDSSSVAVLDTAAGVWCDTKSVVT 383 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~-~~~~~~dv~vyD~~t~~W~~v~~~~~ 383 (998)
..+.+..++..+. +..+....+..| +.+++. ++++|+......... .....+.++++|+++.+....-..
T Consensus 150 ~~~~v~viD~~t~-~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-- 221 (328)
T 3dsm_A 150 YQNRILKIDTETD-KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-- 221 (328)
T ss_dssp TCCEEEEEETTTT-EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC--
T ss_pred CCCEEEEEECCCC-eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec--
Confidence 1245777776654 433332222212 223333 578888753221110 001136799999999986643222
Q ss_pred CCCCCCCccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCCCCcccEEEeccc
Q 001901 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLLDDLLVAEDL 439 (998)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyVfGG~~~~~~l~Dv~~ld~~ 439 (998)
+....-+.+++. +++||+..+ .++++|..
T Consensus 222 -------------------~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~ 252 (328)
T 3dsm_A 222 -------------------KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVE 252 (328)
T ss_dssp -------------------CTTCCCEEEEECTTSCEEEEESS--------SEEEEETT
T ss_pred -------------------CCCCCceeEEEecCCCEEEEEcc--------EEEEEECC
Confidence 111122444444 568888754 67888764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0034 Score=72.65 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=46.4
Q ss_pred CCeEEEecCCCC--------------------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--HH
Q 001901 698 APIKIFGDLHGQ--------------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LE 749 (998)
Q Consensus 698 ~~i~vvGDiHG~--------------------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~e 749 (998)
.+|.+++|+|.. ...|.++++.+.....+ -+|++||+++.|... .+
T Consensus 40 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~ 113 (443)
T 2xmo_A 40 LSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTD------VLIISGDLTNNGEKTSHEE 113 (443)
T ss_dssp EEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCS------EEEEESCCBSSCCHHHHHH
T ss_pred eEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCHHHHHH
Confidence 468999999974 34556666554211112 688999999998743 23
Q ss_pred HHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 750 TITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 750 vl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
+..+|-.|+. .+-.++.++||||...
T Consensus 114 ~~~~l~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 114 LAKKLTQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHHHHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHHHHHHh-CCCeEEEECCcCCCCC
Confidence 3344444431 2346999999999853
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.3 Score=52.05 Aligned_cols=185 Identities=11% Similarity=-0.010 Sum_probs=112.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||+-.|..+. +.+.++|+.+++-..-... +..-.+.+++..+++||+.-.
T Consensus 52 ~~~LyestG~~g~------------------------S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 52 NGYFYESTGLNGR------------------------SSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp TTEEEEEEEETTE------------------------EEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe
Confidence 5789998885432 3788999999876554444 333456778888999999965
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 105 ~------~~~v~v~D~~t~~-~~~ti~------~~~eG~glt~dg~-~L~~SdG------s~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 105 K------NGLGFVWNIRNLR-QVRSFN------YDGEGWGLTHNDQ-YLIMSDG------TPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp S------SSEEEEEETTTCC-EEEEEE------CSSCCCCEEECSS-CEEECCS------SSEEEEECTTTCS-EEEEEE
T ss_pred e------CCEEEEEECccCc-EEEEEE------CCCCceEEecCCC-EEEEECC------CCeEEEEcCCCCe-EEEEEE
Confidence 3 3689999999864 222332 2236666665444 7888644 2579999999873 222332
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC-------CcceeEEEEE--C
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS-------PRYQHAAVFV--N 343 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~-------pR~~hsav~~--~ 343 (998)
.... ..+...--.....+++||+--- ..+.+..+|+.+...-.|....+..|. .-.-.+.+.. .
T Consensus 164 V~~~-g~~~~~lNELe~~~G~lyan~w------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 164 VTAH-GEELPELNELEWVDGEIFANVW------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred eccC-CccccccceeEEECCEEEEEEc------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 2111 0000111112334889886421 246788888877655677777654322 1233455555 4
Q ss_pred CEEEEEccc
Q 001901 344 ARLHVSGGA 352 (998)
Q Consensus 344 ~~L~V~GG~ 352 (998)
++|||.|-.
T Consensus 237 ~~lfVTGK~ 245 (262)
T 3nol_A 237 HRLFVTGKL 245 (262)
T ss_dssp TEEEEEETT
T ss_pred CEEEEECCC
Confidence 689998754
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.14 E-value=2.1 Score=47.07 Aligned_cols=187 Identities=15% Similarity=0.165 Sum_probs=101.1
Q ss_pred cEEEEECCCCc--EEEecCCCCC----CCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~----P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~ 224 (998)
.+++||..+.+ |+.-...... .......+.+..++.||+.... ..++.||..+....|..-...
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~~--- 133 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVAG--- 133 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECSS---
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCCC---
Confidence 68899998664 7755422100 0122334455567788886532 479999999876678764311
Q ss_pred CCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC
Q 001901 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS 304 (998)
Q Consensus 225 P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~ 304 (998)
....+.++.++ .+|+... + ..++.||..+....|+.-..... .......+.++.++.+|+. ..
T Consensus 134 ---~~~~~p~~~~~-~v~v~~~-~-----g~l~~~d~~tG~~~W~~~~~~~~--~~~~~~~~~~~~~~~v~~g-~~---- 196 (376)
T 3q7m_A 134 ---EALSRPVVSDG-LVLIHTS-N-----GQLQALNEADGAVKWTVNLDMPS--LSLRGESAPTTAFGAAVVG-GD---- 196 (376)
T ss_dssp ---CCCSCCEEETT-EEEEECT-T-----SEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEEC-CT----
T ss_pred ---ceEcCCEEECC-EEEEEcC-C-----CeEEEEECCCCcEEEEEeCCCCc--eeecCCCCcEEECCEEEEE-cC----
Confidence 11222234454 6766433 2 37999999888778987543211 0011123334457777763 21
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCC----CCc---ceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCC--eE
Q 001901 305 VPLASAYGLAKHRDGRWEWAIAPGVSP----SPR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VW 375 (998)
Q Consensus 305 ~~~~dv~~~~~~~~~~W~w~~~~g~~P----~pR---~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~--~W 375 (998)
...++.++.. +++-.|......+. ..| .....++.++.+|+.+. ...+++||+++. .|
T Consensus 197 --~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~----------~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 197 --NGRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY----------NGNLTALDLRSGQIMW 263 (376)
T ss_dssp --TTEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECT----------TSCEEEEETTTCCEEE
T ss_pred --CCEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec----------CcEEEEEECCCCcEEe
Confidence 1246666654 34444444322110 011 22334566888888642 234899999877 47
Q ss_pred EE
Q 001901 376 CD 377 (998)
Q Consensus 376 ~~ 377 (998)
+.
T Consensus 264 ~~ 265 (376)
T 3q7m_A 264 KR 265 (376)
T ss_dssp EE
T ss_pred ec
Confidence 54
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.00 E-value=1.7 Score=47.89 Aligned_cols=181 Identities=13% Similarity=0.170 Sum_probs=103.7
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
...++.||..+.+ |+.-.... ....+...+.+..++.+|+ |.. ...++.||..+....|.... ..|.
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~-g~~------~g~l~~~d~~tG~~~w~~~~---~~~~ 220 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVV-GGD------NGRVSAVLMEQGQMIWQQRI---SQAT 220 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEE-CCT------TTEEEEEETTTCCEEEEEEC---CC--
T ss_pred CCeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEE-EcC------CCEEEEEECCCCcEEEEEec---ccCC
Confidence 4569999998775 87654321 1111222344455677666 321 24699999988766788654 1121
Q ss_pred CC--------cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001901 227 PR--------YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (998)
Q Consensus 227 ~R--------~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfG 298 (998)
.. .....++.++ .+|+.+. + ..+++||+.+....|+.-.. ......+.++.+|+..
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~-~v~~~~~-~-----g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~ 284 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNG-VVFALAY-N-----GNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVD 284 (376)
T ss_dssp ---------CCCCCCEEETT-EEEEECT-T-----SCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEE
T ss_pred CCcccccccccCCCcEEECC-EEEEEec-C-----cEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEc
Confidence 11 1123334454 6777542 2 36899999988778986421 1233456688999875
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe--EE
Q 001901 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WC 376 (998)
Q Consensus 299 G~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--W~ 376 (998)
. ...++.++.. +++-.|..... ..+...+.++.++.||+... ...+++||+.+.+ |+
T Consensus 285 ~-------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 285 Q-------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp T-------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCCEEEE
T ss_pred C-------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCcEEEE
Confidence 3 1346777765 34445554321 12233344567888887531 2359999998886 54
Q ss_pred E
Q 001901 377 D 377 (998)
Q Consensus 377 ~ 377 (998)
.
T Consensus 344 ~ 344 (376)
T 3q7m_A 344 Q 344 (376)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.34 Score=51.68 Aligned_cols=182 Identities=7% Similarity=-0.073 Sum_probs=108.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||+-.|.. +.+..+|+.+++-..-. . +..-.+.+.+..+++||+...
T Consensus 64 ~~~Ly~stG~~--------------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 64 QGHFFESTGHQ--------------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp TTEEEEEETTT--------------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEES
T ss_pred CCEEEEEcCCC--------------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEc
Confidence 68999999853 24888999987643332 3 333456778888999999865
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 114 ~------~~~v~V~D~~Tl~-~~~ti~------~~~eGwGLt~Dg~-~L~vSdG------s~~l~~iDp~T~~-v~~~I~ 172 (268)
T 3nok_A 114 T------EGLLFTWSGMPPQ-RERTTR------YSGEGWGLCYWNG-KLVRSDG------GTMLTFHEPDGFA-LVGAVQ 172 (268)
T ss_dssp S------SCEEEEEETTTTE-EEEEEE------CSSCCCCEEEETT-EEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred c------CCEEEEEECCcCc-EEEEEe------CCCceeEEecCCC-EEEEECC------CCEEEEEcCCCCe-EEEEEE
Confidence 3 3679999998853 122222 2334667776665 8999755 3589999999873 222222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC--------CCcceeEEEEE--
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP--------SPRYQHAAVFV-- 342 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P--------~pR~~hsav~~-- 342 (998)
... .+.+-..-......+++||+--- ..+++..+|+.+...-.|..+.+..| ..-.-.+.+..
T Consensus 173 V~~-~g~~v~~lNeLe~~dG~lyanvw------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 173 VKL-RGQPVELINELECANGVIYANIW------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp CEE-TTEECCCEEEEEEETTEEEEEET------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred eCC-CCcccccccccEEeCCEEEEEEC------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 211 11111111223345888886421 24578888887665556666653211 11122344444
Q ss_pred CCEEEEEccc
Q 001901 343 NARLHVSGGA 352 (998)
Q Consensus 343 ~~~L~V~GG~ 352 (998)
+++|||.|=.
T Consensus 246 ~~rlfVTGK~ 255 (268)
T 3nok_A 246 SGRIFMTGKL 255 (268)
T ss_dssp TCCEEEEETT
T ss_pred CCEEEEeCCC
Confidence 3688988753
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0051 Score=69.79 Aligned_cols=70 Identities=20% Similarity=0.223 Sum_probs=45.7
Q ss_pred CCeEEEecCCCCHH----------------HHHHHHHHcCCCCCCCCccceeEEEecccc-CCCCChHHHH----HHHHH
Q 001901 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQHSLETI----TLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyV-DRG~~s~evl----~ll~~ 756 (998)
++++.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~ 74 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKR 74 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHH
Confidence 36889999997544 445555443211122 688999999 9887776544 33444
Q ss_pred hhhcCCCcEEEeecCcccc
Q 001901 757 LKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 757 lk~~~p~~v~llrGNHE~~ 775 (998)
|+.. -.|+++.||||..
T Consensus 75 l~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 75 MMRT--APVVVLPGNQDWK 91 (379)
T ss_dssp HHHH--SCEEECCCTTSCT
T ss_pred HHhC--CCEEEEcCCCccc
Confidence 4433 4699999999943
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0087 Score=69.03 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=37.7
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001901 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (998)
.+|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 77 mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 77 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHHH
T ss_pred eEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 359999999964 33566666665332222 689999999999999888765443
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.01 Score=67.99 Aligned_cols=73 Identities=23% Similarity=0.223 Sum_probs=50.4
Q ss_pred CCeEEEecCCCCH------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 001901 698 APIKIFGDLHGQF------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (998)
Q Consensus 698 ~~i~vvGDiHG~~------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (998)
.+|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+-.+
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~ 106 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLELLRKYCMGD 106 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCS
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHHHHHHhccC
Confidence 4699999999532 3556666554322222 6899999999999888877655554321
Q ss_pred -------------------------------CCCcEEEeecCccccc
Q 001901 761 -------------------------------YPNNVHLIRGNHEAAD 776 (998)
Q Consensus 761 -------------------------------~p~~v~llrGNHE~~~ 776 (998)
..-.||+|.||||...
T Consensus 107 ~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 107 RPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp SCCCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred CcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 1246999999999864
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.013 Score=66.96 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001901 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (998)
.+++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 369999999975 34566666655332222 689999999999999887765544
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.35 E-value=0.8 Score=55.76 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=65.4
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCC-----ccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPPTP-----RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~p-----R~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.++.||..+.+ |+.-........+ ....+.++.+++||+... ...++.+|..+....|+.-.....
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~ 160 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQ 160 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCc
Confidence 68899998775 8765432100000 112345566788888643 256999999987767987531010
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 161 ~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 161 KGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 011112223344555 676644322222346799999999887888753
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=95.33 E-value=3.4 Score=43.39 Aligned_cols=208 Identities=17% Similarity=0.103 Sum_probs=123.9
Q ss_pred cceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCccc
Q 001901 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLAD 255 (998)
Q Consensus 176 ~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lnd 255 (998)
+-++....++.+|+-.|... .+.+.++|+.+.. -..-. ++|..-++.+++..++ +||+.... -+.
T Consensus 22 ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgk--v~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~-----~~~ 86 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG----RSSVRKVDLETGR--ILQRA---EVPPPYFGAGIVAWRD-RLIQLTWR-----NHE 86 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT----SCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESS-----SSE
T ss_pred ccccEEEECCEEEEECCCCC----CceEEEEECCCCC--EEEEE---eCCCCcceeEEEEeCC-EEEEEEee-----CCE
Confidence 34577777889999988632 2579999999873 22222 4566667788888887 89998654 368
Q ss_pred EEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-c
Q 001901 256 VWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-R 334 (998)
Q Consensus 256 v~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~p-R 334 (998)
+++||+.+. +-..--+.+ ....+.+..+++||+.-| .+.++.+|+.+...-.-..+... +.+ +
T Consensus 87 v~v~D~~tl--~~~~ti~~~------~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~-g~~~~ 150 (243)
T 3mbr_X 87 GFVYDLATL--TPRARFRYP------GEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG-GRPLD 150 (243)
T ss_dssp EEEEETTTT--EEEEEEECS------SCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECC
T ss_pred EEEEECCcC--cEEEEEeCC------CCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC-Ccccc
Confidence 999999887 433221111 123345566778888754 24577788776533333444321 222 2
Q ss_pred ceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe---EEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEE
Q 001901 335 YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAA 411 (998)
Q Consensus 335 ~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~---W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa 411 (998)
.-.-+...+++||+--- ..++|.+.|+++.+ |..+..+. |.... ...+..-.--+.
T Consensus 151 ~lNeLe~~~G~lyanvw---------~s~~I~vIDp~tG~V~~~idl~~l~--~~~~~----------~~~~~~~vlNGI 209 (243)
T 3mbr_X 151 NLNELEWVNGELLANVW---------LTSRIARIDPASGKVVAWIDLQALV--PDADA----------LTDSTNDVLNGI 209 (243)
T ss_dssp CEEEEEEETTEEEEEET---------TTTEEEEECTTTCBEEEEEECGGGS--TTTTS----------CCCTTSSCEEEE
T ss_pred cceeeEEeCCEEEEEEC---------CCCeEEEEECCCCCEEEEEECCcCc--ccccc----------ccCCcCCceEEE
Confidence 22234556888886421 15689999999986 44444331 10000 000112233555
Q ss_pred EEE--CCEEEEEcCCCCCCCcccEEEecccc
Q 001901 412 AAV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 412 ~~~--~~~LyVfGG~~~~~~l~Dv~~ld~~~ 440 (998)
+.. +++|||.|= +...+|.+...+
T Consensus 210 A~d~~~~~lfVTGK-----~wp~~~~v~~~~ 235 (243)
T 3mbr_X 210 AFDAEHDRLFVTGK-----RWPMLYEIRLTP 235 (243)
T ss_dssp EEETTTTEEEEEET-----TCSEEEEEEECC
T ss_pred EEcCCCCEEEEECC-----CCCcEEEEEEec
Confidence 555 579999995 567777776644
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=95.23 E-value=3.9 Score=43.54 Aligned_cols=185 Identities=10% Similarity=0.037 Sum_probs=106.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
+.+..+|+.+++-..--.. +....+++.+..++.+|+..-. .+.+++||..+.. .-.+++ .+ .| .
T Consensus 44 s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~-v~~~i~-~g-~~---~ 108 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS-NIKNFT-HQ-MK---D 108 (266)
T ss_dssp CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE-EEEEEE-CC-SS---S
T ss_pred CEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc-EEEEEE-CC-CC---C
Confidence 4799999999886554333 2334556788888999998642 3679999998753 112222 12 12 3
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~d 309 (998)
+.+++. .++++|+.-| .+.++.+|+.+.. .-..+..... +.+...--.....++++|+--. ..++
T Consensus 109 g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~-v~~~I~Vg~~-~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 109 GWGLAT-DGKILYGSDG------TSILYEIDPHTFK-LIKKHNVKYN-GHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp CCEEEE-CSSSEEEECS------SSEEEEECTTTCC-EEEEEECEET-TEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred eEEEEE-CCCEEEEECC------CCeEEEEECCCCc-EEEEEEECCC-CcccccceeEEEECCEEEEecC------CCCe
Confidence 344444 4447998643 3689999998872 1222222111 1111111122233888887632 2467
Q ss_pred EEEEecCCCCeEEEEECCCCC--------CCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCC
Q 001901 310 AYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (998)
Q Consensus 310 v~~~~~~~~~~W~w~~~~g~~--------P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~ 373 (998)
+..+|+.+...-.|..+.+.. +..-.-.+.++. ++++||.|+.. +.+++.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---------~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---------PKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---------SEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---------CeEEEEEEecc
Confidence 888888776555666654321 111123455555 46899998753 45777766443
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=95.07 E-value=2.6 Score=46.94 Aligned_cols=187 Identities=14% Similarity=0.070 Sum_probs=91.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.++++|+.+.+.......+........-..+.+ ++.+|+.|+. ...+++||+.+....+ .+. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~-~~~-----~~~~ 212 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKA-TVD-----LTGK 212 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEE-EEE-----CSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEE-EEc-----CCCC
Confidence 589999998887654332110111111122233 4588887764 2579999998754122 222 1112
Q ss_pred cccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC-
Q 001901 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP- 306 (998)
Q Consensus 229 ~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~- 306 (998)
.-.+++... ++.+|+.++.++ .+.+||+.+. +....-.... .....+...+++.+++++.......
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDKIG-----LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCCCS-----EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecCCC-----CceEEEEcCCCCEEEEEECCCCcccc
Confidence 223333433 335667665443 6899999887 5443322211 1122223335545555544322211
Q ss_pred -cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 307 -LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 307 -~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
-..++.|+.... +....... +.....+++. +..+|+.++. ...+.+||+.+.+-.
T Consensus 281 ~dg~i~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 281 GGGRLGIYSMDKE-KLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp CCEEEEEEETTTT-EEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCC-cEEeeccC-----CCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEE
Confidence 235566665543 22211100 0111122232 3368887654 245899999877644
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=94.83 E-value=2.2 Score=48.16 Aligned_cols=191 Identities=13% Similarity=0.027 Sum_probs=95.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..++++|+....-..+.... .. -.+.+.- +++.+++++.... ...++++|+.+.. ...+. ..+ .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~-v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~--~~~l~---~~~--~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QP-LMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGA--VRQVA---SFP--R 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SC-EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC--EEEEE---CCS--S
T ss_pred ceEEEEcCCCCCCEEEeCCC----Cc-ceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCc--EEEee---cCC--C
Confidence 58899998876555554321 11 1122222 3444555553221 2579999998763 44443 111 1
Q ss_pred cccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 229 YGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 229 ~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
.-.+.+.-.++ +|++.+..++ ...+|.+|+.+. +...+..... .........+++.+++++.... .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~l~~~s~~~g---~ 290 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS-----NNTEPTWFPDSQNLAFTSDQAG---R 290 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCCSS-----CEEEEEECTTSSEEEEEECTTS---S
T ss_pred cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCCCC-----cccceEECCCCCEEEEEECCCC---C
Confidence 22233333333 4554554443 247999999887 6665543221 1122223346665555543211 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
..+|.++.... . ...... ......+.++. +++.+++++.... ...++++|+.+.+...+..
T Consensus 291 ~~i~~~d~~~~-~--~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 291 PQVYKVNINGG-A--PQRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp CEEEEEETTSS-C--CEECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECCC
T ss_pred cEEEEEECCCC-C--EEEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEecC
Confidence 35777766543 1 122221 11222223332 5665556554321 3469999999998866543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=1.5 Score=52.16 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=64.1
Q ss_pred cEEEEEC-CCC--cEEEecCCCCCCC--C---ccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 151 DVHCYDV-LTN--KWSRITPFGEPPT--P---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 151 dv~~yD~-~t~--~W~~l~~~g~~P~--p---R~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
.++.||. .+. .|+.-........ + ....+.++.+++||+... ...++.+|..+....|+.-..
T Consensus 74 ~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~-- 144 (571)
T 2ad6_A 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVC-- 144 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC--
T ss_pred EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCC--
Confidence 6889998 766 4886433210000 0 112345567888888743 246999999887667986431
Q ss_pred CCCCC-CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 223 PGPGP-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 223 ~~P~~-R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
..+.. ....+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 145 ~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 145 DPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 11111 11223334555 677654321111235799999999888897643
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=94.30 E-value=5.2 Score=42.46 Aligned_cols=206 Identities=8% Similarity=0.012 Sum_probs=118.0
Q ss_pred eEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEE
Q 001901 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (998)
Q Consensus 178 hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~ 257 (998)
++....++.+|+..|... .+.+.++|+.+.. -..-. +++..-++.+++..++ +||+.... -+.++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgk--v~~~~---~l~~~~FgeGit~~g~-~ly~ltw~-----~~~v~ 110 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGK--TLQQI---ELGKRYFGEGISDWKD-KIVGLTWK-----NGLGF 110 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESS-----SSEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCc--EEEEE---ecCCccceeEEEEeCC-EEEEEEee-----CCEEE
Confidence 555666889999988632 2578999999874 22222 3444456677778877 89998653 35899
Q ss_pred EEECCCCCceEE-EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-cc
Q 001901 258 ALDTAAKPYEWR-KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-RY 335 (998)
Q Consensus 258 ~yD~~s~~~~W~-~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~p-R~ 335 (998)
+||+.+. +-. .+...+ ...+.+..+++||+.-| .+.++.+|+.+...-.-..+... +.+ +.
T Consensus 111 v~D~~t~--~~~~ti~~~~-------eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~-g~~~~~ 173 (262)
T 3nol_A 111 VWNIRNL--RQVRSFNYDG-------EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH-GEELPE 173 (262)
T ss_dssp EEETTTC--CEEEEEECSS-------CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET-TEECCC
T ss_pred EEECccC--cEEEEEECCC-------CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC-Cccccc
Confidence 9999887 322 222211 22344455677888643 24577888776544444444321 111 11
Q ss_pred eeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcC-CCCCCCCccccCCCCCccCCCCcceeEEEEE
Q 001901 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (998)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (998)
---+...+++||+-- -..+.|.+.|+++.+-...-.+.. .+... ...+..-.-.+.+..
T Consensus 174 lNELe~~~G~lyan~---------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-----------~~~~~~~vlNGIA~d 233 (262)
T 3nol_A 174 LNELEWVDGEIFANV---------WQTNKIVRIDPETGKVTGIIDLNGILAEAG-----------PLPSPIDVLNGIAWD 233 (262)
T ss_dssp EEEEEEETTEEEEEE---------TTSSEEEEECTTTCBEEEEEECTTGGGGSC-----------SCCSSCCCEEEEEEE
T ss_pred cceeEEECCEEEEEE---------ccCCeEEEEECCCCcEEEEEECCcCccccc-----------cccCcCCceEEEEEc
Confidence 112445588988632 125689999999986433332210 00000 000112234566665
Q ss_pred --CCEEEEEcCCCCCCCcccEEEecccc
Q 001901 415 --GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 415 --~~~LyVfGG~~~~~~l~Dv~~ld~~~ 440 (998)
+++|||.|- +...+|.+...+
T Consensus 234 p~~~~lfVTGK-----~Wp~~~ev~~~~ 256 (262)
T 3nol_A 234 KEHHRLFVTGK-----LWPKVFEITLTQ 256 (262)
T ss_dssp TTTTEEEEEET-----TCSEEEEEEEEE
T ss_pred CCCCEEEEECC-----CCCceEEEEEec
Confidence 569999985 466677766543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=94.14 E-value=7.1 Score=41.53 Aligned_cols=206 Identities=10% Similarity=0.017 Sum_probs=115.2
Q ss_pred eEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccE
Q 001901 178 HVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (998)
Q Consensus 178 hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv 256 (998)
|+.+..+ +.+|+..|.. ..+.+.++|+.+.. -..-. +++....+..++..++ +||+..-. -+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg~--v~~~i---~l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v 88 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTGK--VENIH---KMDDSYFGEGLTLLNE-KLYQVVWL-----KNIG 88 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEETT-----CSEE
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCCC--EEEEE---ecCCCcceEEEEEeCC-EEEEEEec-----CCEE
Confidence 6777766 6999987742 13679999999874 22222 2344445566777776 89998643 3579
Q ss_pred EEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-c
Q 001901 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (998)
Q Consensus 257 ~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR-~ 335 (998)
++||+.+....- .++ .+ .| ...+....++++|+.-| .+.++.+|+.+...-.-..+... +.+. .
T Consensus 89 ~viD~~t~~v~~-~i~-~g-~~----~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~-~~p~~~ 153 (266)
T 2iwa_A 89 FIYDRRTLSNIK-NFT-HQ-MK----DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYN-GHRVIR 153 (266)
T ss_dssp EEEETTTTEEEE-EEE-CC-SS----SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEEECCCCcEEE-EEE-CC-CC----CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCC-Cccccc
Confidence 999998872111 122 11 11 12334455678888643 34678888776533333333321 1111 1
Q ss_pred eeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe---EEEcccCcCCC-CCCCCccccCCCCCccCCCCcceeEE
Q 001901 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSP-RTGRYSADAAGGDAAVELTRRCRHAA 411 (998)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~---W~~v~~~~~~p-~~~~~~~~~~~~~~~~~p~~R~~hsa 411 (998)
-..+...++++|+--. ..+.|.+.|+++++ |..+....... .. ..+..-.-.+.
T Consensus 154 ~nele~~dg~lyvn~~---------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~-------------~~~~~~v~nGI 211 (266)
T 2iwa_A 154 LNELEYINGEVWANIW---------QTDCIARISAKDGTLLGWILLPNLRKKLIDE-------------GFRDIDVLNGI 211 (266)
T ss_dssp EEEEEEETTEEEEEET---------TSSEEEEEETTTCCEEEEEECHHHHHHHHHT-------------TCTTCCCEEEE
T ss_pred ceeEEEECCEEEEecC---------CCCeEEEEECCCCcEEEEEECCCcccccccc-------------cccccCceEEE
Confidence 2233445888887521 15679999999985 33333110000 00 00011123555
Q ss_pred EEE--CCEEEEEcCCCCCCCcccEEEecccc
Q 001901 412 AAV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 412 ~~~--~~~LyVfGG~~~~~~l~Dv~~ld~~~ 440 (998)
+.. ++++||.|+.. +.+++++...
T Consensus 212 a~~~~~~~lfVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp EEETTTTEEEEEETTC-----SEEEEEEEEE
T ss_pred EEcCCCCEEEEECCCC-----CeEEEEEEec
Confidence 555 56999999853 5566666554
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=93.93 E-value=3.7 Score=44.95 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=91.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.++++|+.+++-...-..+ ..-++++.. +..+|+.|+. ...+++||+.+.. ....... .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~--~~~~~~~-----~ 73 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN--VIATVPA-----G 73 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE--EEEEEEC-----S
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCC------CCeEEEEECCCCe--EEEEEEC-----C
Confidence 47889999988655433221 112333333 3367777754 2579999998753 3222211 1
Q ss_pred CcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCCCC
Q 001901 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSV 305 (998)
Q Consensus 228 R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~lyvfGG~~~~~~ 305 (998)
..-.+++... ++.||+.|..+ ..+.+||+.+. +......... .....+...++ .+|+.++.+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGD---- 137 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECSS-----SEEEEEECTTSSEEEEEETTT----
T ss_pred CCccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCCC-----CcceEEECCCCCEEEEEeCCC----
Confidence 1223333333 33566665433 46999999887 4433322221 11222222334 566776533
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
..++.++.... +.......+. .-..+++. +..+|+.++. ...+++||+.+.+....
T Consensus 138 --~~v~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 138 --KTVSVINTVTK-AVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred --CEEEEEECCCC-cEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEEE
Confidence 24566655433 3333222221 11333333 3467777653 24599999998865443
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=93.81 E-value=0.064 Score=61.51 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=41.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC------hHH-HHHHHHHhhhcCCCcEEEeecC
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH------SLE-TITLLLALKVEYPNNVHLIRGN 771 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~------s~e-vl~ll~~lk~~~p~~v~llrGN 771 (998)
++.++||+|....... +++.+.....+-+ -+|++||+++.+.. ..+ ...+|-.+.... -++.+.||
T Consensus 121 ~f~~igD~~~~~~~~~-~l~~~~~~~~~~D----~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~GN 193 (424)
T 2qfp_A 121 TFGLIGDLGQSFDSNT-TLSHYELSPKKGQ----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTAGN 193 (424)
T ss_dssp EEEEECSCTTBHHHHH-HHHHHHTCSSCCC----EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECCCH
T ss_pred EEEEEEeCCCCCChHH-HHHHHHhCCCCCC----EEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeecCC
Confidence 5899999998875442 3443321110111 58899999986421 112 223333343333 59999999
Q ss_pred ccccc
Q 001901 772 HEAAD 776 (998)
Q Consensus 772 HE~~~ 776 (998)
||...
T Consensus 194 HD~~~ 198 (424)
T 2qfp_A 194 HEIEF 198 (424)
T ss_dssp HHHCC
T ss_pred ccccc
Confidence 99863
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=93.75 E-value=5.8 Score=41.83 Aligned_cols=180 Identities=13% Similarity=0.084 Sum_probs=87.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||+.+.++....... .....-.+++.. ++..++.|+.+ ..+.+||+.+.. ..... .. ...
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~--~~~~~---~~-~~~ 184 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQT--LVRQF---QG-HTD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE--EEEEE---CC-CSS
T ss_pred CcEEEEECCCCCcceeeecc--cCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCc--eeeee---ec-ccC
Confidence 47888999887754433221 001111222222 34556666542 469999998752 22211 11 111
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.+++...++..++.|+.++ .+..||+.+. +-....... ..........++.++++|+.++
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~~~------ 246 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFT-----SQIFSLGYCPTGEWLAVGMESS------ 246 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECS-----SCEEEEEECTTSSEEEEEETTS------
T ss_pred ceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecCC-----CceEEEEECCCCCEEEEEcCCC------
Confidence 222333333445777777554 6889999877 332221111 1122223334667777776543
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+..|+........ ... ....-.++.+. ++++++.|+.+ ..+.+||..+.+-.
T Consensus 247 ~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred cEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecCC---------CcEEEEECCCCeEE
Confidence 34555554442221 111 11112233333 46677777642 34889999887654
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=93.61 E-value=0.059 Score=58.27 Aligned_cols=21 Identities=5% Similarity=0.267 Sum_probs=18.1
Q ss_pred HHHHHHHHHcCCcEEEEcccc
Q 001901 885 DRVMEFCNNNDLQLIVRAHEC 905 (998)
Q Consensus 885 ~~~~~fl~~~~l~~iiR~H~~ 905 (998)
+.+.+.|+++++++++-||.=
T Consensus 203 ~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 203 KQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp HHTHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHHHcCCcEEEECChh
Confidence 567778999999999999984
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=93.38 E-value=6.1 Score=43.12 Aligned_cols=178 Identities=16% Similarity=0.108 Sum_probs=89.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.++++|+.+++....-..+ . .-.+++.. ++.+|+.|.. ...+++||+.+.. ....... .
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~--~~~~~~~-----~ 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNT--VAGTVKT-----G 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEEC-----S
T ss_pred CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCe--EEEEEeC-----C
Confidence 47889999888765544332 1 22333333 3366666543 2569999998863 3222211 1
Q ss_pred CcccEEEEECC-cEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCC
Q 001901 228 RYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSV 305 (998)
Q Consensus 228 R~~hs~~~~~~-~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~lyvfGG~~~~~~ 305 (998)
..-.+++...+ +.||+.++.+ +.+++||+.+. +....-..... ....+...+ +.||+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~--~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTK--AVINTVSVGRS-----PKGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECCSS-----EEEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCC--cEEEEEecCCC-----cceEEECCCCCEEEEEeCCC----
Confidence 12233444333 3576776544 37899999887 55443332221 122222223 4666766543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
..++.++.... ........ ...-.++++. ++ .+++.+ ... ....+++||+.+.+-.
T Consensus 180 --~~v~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~-~~~------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 180 --MSISVIDTVTN-SVIDTVKV-----EAAPSGIAVNPEGTKAYVTN-VDK------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEEC-----SSEEEEEEECTTSSEEEEEE-ECS------SCCEEEEEETTTTEEE
T ss_pred --CEEEEEECCCC-eEEEEEec-----CCCccceEECCCCCEEEEEe-cCc------CCCcEEEEECCCCeEE
Confidence 23566665543 22211111 1112223333 34 455543 211 1356999999887643
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=93.31 E-value=3.3 Score=42.60 Aligned_cols=190 Identities=11% Similarity=0.049 Sum_probs=94.4
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCC-CCCceEEeeecCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ-QRPRWHRVVVQGPGP 225 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t-~t~~W~~l~~~g~~P 225 (998)
....++++|+.+.+...+.... ..-.+++.. +++.+++++. ..++++|+.+ .. ...+. ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~--~~~~~---~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPS--PEKVD---TGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCS--CEECC---CTT
T ss_pred cceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCC--ceEec---ccc
Confidence 4568999999998877665431 112223332 3455555542 4799999987 53 44433 112
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASS 304 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-lyvfGG~~~~~ 304 (998)
....-..++...++..+++++.+.. ....+|.+|+.+. ....+.... .........+++ |++.++.++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~------~~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKNL------PSYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSSS------SEEEEEECTTSSEEEEEEEETT--
T ss_pred ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecCC------CccceEECCCCCEEEEEECCCC--
Confidence 1122223334444455565553322 2468999998777 444443221 112222333444 444444332
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCE-EEEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 305 ~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~-L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
...+|.++.... ........ ......+++. +++ |++.+..++ ...+|.++..+.....+..
T Consensus 152 --~~~l~~~~~~~~---~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 152 --VFDIYSMDIDSG---VETRLTHG---EGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp --EEEEEEEETTTC---CEEECCCS---SSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECCC
T ss_pred --ceEEEEEECCCC---cceEcccC---CCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEec
Confidence 246677665543 22222221 1111222332 454 444433222 3568999988777766543
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=93.30 E-value=4 Score=48.81 Aligned_cols=113 Identities=8% Similarity=0.034 Sum_probs=61.8
Q ss_pred cEEEEEC-CCC--cEEEecCCCCC--CCCc---cceEEEE--eCCE----EEEEeCCCCCCCCcccEEEEEcCCCCCceE
Q 001901 151 DVHCYDV-LTN--KWSRITPFGEP--PTPR---AAHVATA--VGTM----VVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (998)
Q Consensus 151 dv~~yD~-~t~--~W~~l~~~g~~--P~pR---~~hsa~~--~~~~----lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~ 216 (998)
.++.||. .+. .|+.-...... +.++ ...+.++ .+++ ||+... ...++.+|..+....|+
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAALNAETGETVWK 146 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEEECCCCCEEEe
Confidence 6889999 776 48865432100 0011 1223444 4656 776532 24699999988776798
Q ss_pred EeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 217 ~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.-... ..+......+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 147 ~~~~~-~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 147 VENSD-IKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EECCC-GGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCC-CCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 64311 0000011223344565 666543211111235799999999887887653
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.03 E-value=12 Score=45.52 Aligned_cols=114 Identities=12% Similarity=0.051 Sum_probs=64.4
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCC-----CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 150 ADVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
+.++.+|..+.+ |+.-........ .....+.++.+++||+... ...++.+|..+....|+.-....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCC
Confidence 368899998764 886432210000 0012234566788887642 24699999998776798754211
Q ss_pred CCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 223 ~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.........+.++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 153 ~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 1111122223345565 66663322111234579999999988789864
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=92.74 E-value=0.11 Score=59.74 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=40.0
Q ss_pred CeEEEecCCCCHHHHHHHHHHcC-CC-CCCCCccceeEEEeccccCCCCC-----h-HH-HHHHHHHhhhcCCCcEEEee
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYG-SP-STAGDIAYIDYLFLGDYVDRGQH-----S-LE-TITLLLALKVEYPNNVHLIR 769 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g-~~-~~~~~~~~~~~vfLGDyVDRG~~-----s-~e-vl~ll~~lk~~~p~~v~llr 769 (998)
++.++||+|..... .+.++.+. .+ ..+ -+|++||+++.+.. . .+ ...+|-.+.... -++.+.
T Consensus 128 ~f~~~gD~~~~~~~-~~~l~~i~~~~~~~D------~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~ 198 (426)
T 1xzw_A 128 VFGLIGDIGQTHDS-NTTLTHYEQNSAKGQ------AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTA 198 (426)
T ss_dssp EEEEECSCTTBHHH-HHHHHHHHHCTTCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCC
T ss_pred EEEEEEeCCCCCch-HHHHHHHHhCCCCCC------EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEec
Confidence 58899999987532 22232221 11 111 58899999975321 1 11 233344443333 499999
Q ss_pred cCccccc
Q 001901 770 GNHEAAD 776 (998)
Q Consensus 770 GNHE~~~ 776 (998)
||||...
T Consensus 199 GNHD~~~ 205 (426)
T 1xzw_A 199 GNHEIDY 205 (426)
T ss_dssp CGGGCCC
T ss_pred ccccccc
Confidence 9999864
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=92.73 E-value=4.4 Score=45.63 Aligned_cols=191 Identities=10% Similarity=0.094 Sum_probs=99.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
..++++|+.+.+...+.... . ...+.+.. ++ .|++.+..+. ...+|++|+.+.. ...+. . ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~--~~~l~---~--~~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---R--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQ--IRQVT---D--GR 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---S--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCC--EEECC---C--CS
T ss_pred cEEEEEECCCCcEEEeecCC---C--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCC--EEeCc---C--CC
Confidence 48999999998887765431 1 12222222 33 5555554321 2469999998763 44443 1 11
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
......+...++..+++++..+. ...+|.+|+.+. +-..+.... ......+...+++.+++++.+.. .
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g---~ 334 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGG--APQRITWEG-----SQNQDADVSSDGKFMVMVSSNGG---Q 334 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSS--CCEECCCSS-----SEEEEEEECTTSSEEEEEEECSS---C
T ss_pred CcccceEECCCCCEEEEEECCCC--CcEEEEEECCCC--CEEEEecCC-----CcccCeEECCCCCEEEEEECcCC---c
Confidence 11122233333344444443221 247999999887 434433211 12222333346666666654321 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
..++.++.... .. ...... . ...+.++. +++.+++++.++. ...++++|+.+.....+...
T Consensus 335 ~~i~~~d~~~~-~~--~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 335 QHIAKQDLATG-GV--QVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EEEEEEETTTC-CE--EECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCCS
T ss_pred eEEEEEECCCC-CE--EEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeCC
Confidence 45676766544 32 233321 1 22233333 5676777664332 23699999998887776543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=92.54 E-value=13 Score=39.66 Aligned_cols=188 Identities=16% Similarity=0.117 Sum_probs=91.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCC-----CccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPT-----PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~-----pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
+.+++||+.+.+-...-..+.... +..-++++.. ++.+|+.+... ...+++||+.+....+ .+...
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~-~~~~~- 183 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKT-AIQNT- 183 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEE-EECCC-
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEE-EecCC-
Confidence 478999998877433222211111 1112334443 34777776321 2469999998753111 11101
Q ss_pred CCCCCCcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEecc
Q 001901 223 PGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGR 300 (998)
Q Consensus 223 ~~P~~R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~ 300 (998)
...-+.++.. .++++|+... + +.+++||+.+....|..... ...+. ......+... ++.+|+....
T Consensus 184 ----~~~~~~~~~s~dg~~l~~~~~-~-----~~i~~~d~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 184 ----GKMSTGLALDSEGKRLYTTNA-D-----GELITIDTADNKILSRKKLL-DDGKE-HFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp ----CTTCCCCEEETTTTEEEEECT-T-----SEEEEEETTTTEEEEEEECC-CSSSC-CCEEEEEEETTTTEEEEEESS
T ss_pred ----CCccceEEECCCCCEEEEEcC-C-----CeEEEEECCCCeEEEEEEcC-CCCCC-cccceEEECCCCCEEEEEeCC
Confidence 1222333343 3335666543 2 47889999887433332221 11111 1111222333 4457665421
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 301 ~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
.+.++.++..+...-..... + .+ ..+++. ++.+|+.+.. .+.+.+||+.+.+....
T Consensus 252 ------~~~v~~~d~~~~~~~~~~~~-~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 252 ------AAEVLVVDTRNGNILAKVAA-P---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ------SSEEEEEETTTCCEEEEEEC-S---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred ------CCEEEEEECCCCcEEEEEEc-C---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEEE
Confidence 24567777654422222222 1 11 123333 3467876542 34699999998876543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.51 E-value=12 Score=40.02 Aligned_cols=95 Identities=9% Similarity=0.125 Sum_probs=51.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+||+....+..+.... .....-....+ . +.+++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~--~~~~~~~~---~~ 99 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 99 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCC--ceeEeeee---cC
Confidence 5777888766666554331 11111222232 2 4566666642 46889998876 46655532 21
Q ss_pred CCcccEEEEE-CC--cEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 227 PRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 227 ~R~~hs~~~~-~~--~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-..+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 2222223333 32 35777777654 5778888665
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=92.50 E-value=11 Score=39.87 Aligned_cols=185 Identities=10% Similarity=0.046 Sum_probs=90.1
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+.+||+.+.+.......+ . . ...++.- ++.+|+.+.. .+.+++||+.+....-..+. .+..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~---~-~-~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~-- 84 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG---Y-D-FVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQ-EGQS-- 84 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC---C-C-EEEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEE-ECSS--
T ss_pred CCeEEEEeCcccceeeeEEcc---C-C-cceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecc-cCCC--
Confidence 358899999999887655432 1 1 1133332 3367776653 24799999988642122222 2211
Q ss_pred CCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCCC
Q 001901 227 PRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASS 304 (998)
Q Consensus 227 ~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~lyvfGG~~~~~ 304 (998)
..++++... +++|| .+...+ ....+++||+.+. +.......+. ..+..+...++ .+|+.+..+.
T Consensus 85 --~~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~-- 150 (331)
T 3u4y_A 85 --SMADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIPY-----DAVGIAISPNGNGLILIDRSSA-- 150 (331)
T ss_dssp --CCCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECCT-----TEEEEEECTTSSCEEEEEETTT--
T ss_pred --CccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECCC-----CccceEECCCCCEEEEEecCCC--
Confidence 123233333 33566 333221 1137999999887 5544333222 12333344455 4776654321
Q ss_pred CCccc-EEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 305 VPLAS-AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 305 ~~~~d-v~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
. ++.|+...++...... ....+....-..+++. ++ .+|+.+.. .+.+.+||+.+.+.
T Consensus 151 ----~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 151 ----NTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp ----TEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred ----ceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 2 3333333333221111 0000111122333333 34 47776532 34699999988775
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=92.50 E-value=4.9 Score=42.65 Aligned_cols=154 Identities=12% Similarity=0.115 Sum_probs=85.3
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+.+++.|.. ...++++|..+....|+... +.....|.+.+..++.+|+.+ -+.+..||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 466777653 36799999977655687654 111234555566666777732 145999999 66
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCC-CCCcceeEEEEEC
Q 001901 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS-PSPRYQHAAVFVN 343 (998)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~-P~pR~~hsav~~~ 343 (998)
...|+.-.... ...+.+....++++++....+ ...++.++....-.|++....... +...........+
T Consensus 66 ~~~W~~~~~~~-----~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPAG-----CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCTT-----CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCCC-----ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 67887654211 123444555677777765421 235677766433356655433211 1111112233445
Q ss_pred CEEEEEcccCCCCCccccCCeEEEEECCCC-eEE
Q 001901 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (998)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~-~W~ 376 (998)
+.++|.... ...+.+||++-. .|+
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPNGQLLNS 160 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTTSCEEEE
T ss_pred CCEEEEecC---------CCEEEEECCCCCEEEE
Confidence 666665432 345899998733 354
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=92.48 E-value=16 Score=44.00 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=64.0
Q ss_pred cEEEEECCCCc--EEEecCCCCCC-----CCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPP-----TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P-----~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.++.+|..+.+ |+.-....... ......+.++.+++||+... ...++.+|..+....|+.-... .
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~-~ 148 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD-P 148 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-T
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-C
Confidence 68889988764 88643221000 00012234556778887542 2469999999877779875411 1
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
........+.++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 149 ~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 149 AKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 111122233345555 66664332112234579999999988889874
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=92.36 E-value=4.8 Score=42.79 Aligned_cols=155 Identities=14% Similarity=0.018 Sum_probs=94.3
Q ss_pred eEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEE
Q 001901 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (998)
Q Consensus 178 hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~ 257 (998)
++....++.+|+..|.. ..+.++|+.+....-+. ++..-++.+++..++ +||+.... -+.++
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~------l~~~~FgeGit~~g~-~Ly~ltw~-----~~~v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME------RLGNIFAEGLASDGE-RLYQLTWT-----EGLLF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE------ECTTCCEEEEEECSS-CEEEEESS-----SCEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE------CCCCcceeEEEEeCC-EEEEEEcc-----CCEEE
Confidence 56667788999999863 23889999986422222 233445666777776 89998654 35899
Q ss_pred EEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-ce
Q 001901 258 ALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-YQ 336 (998)
Q Consensus 258 ~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR-~~ 336 (998)
+||+.+. +-..--+.. + ...+.+..+++||+.-| .+.++.+|+.+...-.-..+... +.+. .-
T Consensus 120 V~D~~Tl--~~~~ti~~~--~----eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~-g~~v~~l 183 (268)
T 3nok_A 120 TWSGMPP--QRERTTRYS--G----EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR-GQPVELI 183 (268)
T ss_dssp EEETTTT--EEEEEEECS--S----CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCCE
T ss_pred EEECCcC--cEEEEEeCC--C----ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC-Ccccccc
Confidence 9999887 433221111 1 12344466788999854 24577787776533333444321 1221 11
Q ss_pred eEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.-....+++||+-- -..++|.+.|+++.+-
T Consensus 184 NeLe~~dG~lyanv---------w~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 184 NELECANGVIYANI---------WHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEEEETTEEEEEE---------TTCSEEEEECTTTCBE
T ss_pred cccEEeCCEEEEEE---------CCCCeEEEEeCCCCcE
Confidence 22445588888631 1256899999999863
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.32 E-value=3.8 Score=44.20 Aligned_cols=197 Identities=10% Similarity=0.115 Sum_probs=95.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.+.+||+.+.+|..+..... ....-.+++.. . +.+++.|+. ...+.+||+.+.. ........+ ..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~-~~~~~~~~~---~~ 147 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENG-TTSPIIIDA---HA 147 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTS-CCCEEEEEC---CT
T ss_pred EEEEEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCC-ceeeEEecC---CC
Confidence 67889999998876654411 11111222222 2 456666654 2468899988752 122211111 11
Q ss_pred CcccEEEEEC-------------CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC---
Q 001901 228 RYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD--- 291 (998)
Q Consensus 228 R~~hs~~~~~-------------~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~--- 291 (998)
..-.+++... ++.+++.|+.++ .+..||+.+....|..+...... .......+...+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLL 220 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSS
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecc--cCcEeEEEECCCCCC
Confidence 1112222222 246777887765 57777776554356554332210 011122222334
Q ss_pred CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEEC
Q 001901 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (998)
Q Consensus 292 ~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~ 370 (998)
+.+++.|+.++. ..+|.+..... .+........ .....-.++++. ++.++++|+.++ .+.+||.
T Consensus 221 ~~~l~s~~~dg~----i~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg---------~i~iw~~ 285 (379)
T 3jrp_A 221 RSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWKE 285 (379)
T ss_dssp SEEEEEEETTSC----EEEEEESSTTS-CCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS---------SEEEEEE
T ss_pred CCeEEEEeCCCE----EEEEeCCCCCc-cceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC---------cEEEEeC
Confidence 788888886543 23444433211 2222222221 111122223332 567777776532 3667776
Q ss_pred C-CCeEEEcccC
Q 001901 371 A-AGVWCDTKSV 381 (998)
Q Consensus 371 ~-t~~W~~v~~~ 381 (998)
. ..+|..+...
T Consensus 286 ~~~~~~~~~~~~ 297 (379)
T 3jrp_A 286 NLEGKWEPAGEV 297 (379)
T ss_dssp EETTEEEEEEEE
T ss_pred CCCCccccccce
Confidence 5 5688877765
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=92.14 E-value=18 Score=40.43 Aligned_cols=175 Identities=15% Similarity=0.126 Sum_probs=85.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
+.+.+||..+.+-...-.. ....-.+...++.+++.|+.+ ..+.+||+.+.. -.... .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSD------STVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETT------SCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCc--EEEEE-----cCCCC
Confidence 3678899887664433221 111223334466677777642 469999998763 22111 11122
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.++.+.+ .+++.|+.++ .+..||+.+..... ..... +. .....++.. ++..++.|+.++
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~-~~----~~~v~~~~~-~~~~l~s~~~dg------ 276 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRRVLV-GH----RAAVNVVDF-DDKYIVSASGDR------ 276 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEEEEC-CC----SSCEEEEEE-ETTEEEEEETTS------
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeeeEec-CC----CCcEEEEEe-CCCEEEEEeCCC------
Confidence 223334455 4777777664 57788887652111 11111 11 111222333 555666666432
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.+..++.... .-.... .+. ...-.++.+++.+++.|+.+ ..+.+||..+.+-
T Consensus 277 ~i~vwd~~~~-~~~~~~-~~~----~~~v~~~~~~~~~l~~g~~d---------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 277 TIKVWNTSTC-EFVRTL-NGH----KRGIACLQYRDRLVVSGSSD---------NTIRLWDIECGAC 328 (435)
T ss_dssp EEEEEETTTC-CEEEEE-ECC----SSCEEEEEEETTEEEEEETT---------SCEEEEETTTCCE
T ss_pred eEEEEECCcC-cEEEEE-cCC----CCcEEEEEeCCCEEEEEeCC---------CeEEEEECCCCCE
Confidence 2334443332 111111 111 11123334456677777753 3488999987653
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=91.94 E-value=17 Score=39.96 Aligned_cols=188 Identities=15% Similarity=0.105 Sum_probs=88.7
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
....+.+||+.+.+....-.. . ...-.....++.+++.|+.+ ..+.+||+......-..+. + ..
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~---~--~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--~---~~ 217 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAG---H--QARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQ--G---HS 217 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECC---C--SSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--C---CS
T ss_pred CCCeEEEEECcCCeEEEEecC---C--CCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEc--C---CC
Confidence 345788899887764433221 1 11222233345566666642 5689999985321122221 1 11
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~lyvfGG~~~~~~ 305 (998)
..-.++....++.+++.|+.++ .+..||+.+....+...... ....++... +..+++.||...+
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~p~~~~ll~~~~gs~d-- 283 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTNHN-------AAVKAVAWCPWQSNLLATGGGTMD-- 283 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECCCS-------SCCCEEEECTTSTTEEEEECCTTT--
T ss_pred CCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecCCc-------ceEEEEEECCCCCCEEEEecCCCC--
Confidence 1122333333446777887664 68889998763233322111 111222222 4567777652222
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
..+..|+......-...... ..-.++++. ++ .+++.+|.. ...+.+||..+..+..+..+
T Consensus 284 --~~i~i~d~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 284 --KQIHFWNAATGARVNTVDAG------SQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp --CEEEEEETTTCCEEEEEECS------SCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEE
T ss_pred --CEEEEEECCCCCEEEEEeCC------CcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEe
Confidence 23444544433111111111 111222222 33 454444432 24588899888777665443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=91.94 E-value=6.6 Score=41.58 Aligned_cols=181 Identities=9% Similarity=0.083 Sum_probs=94.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
+.++++|..+.+ |+.-... ....|.+.+. ++.+|+.+ .+.++.||. +....|+.-. +.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~~ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----PA 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----CT
T ss_pred CEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----CC
Confidence 478899987775 7654321 1123444444 55777732 245999999 4444677543 22
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCC-CCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYATASARSDGLLLLCGGRDASSV 305 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~-~P~~r~~~~a~~~~~~~lyvfGG~~~~~~ 305 (998)
...-+++....++.+++....+ ...++.+|+. ....|+....... .+.. ..+.+....++.+++....
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~-~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH----PSTILEVNMK-GEVLSKTEFETGIERPHA-QFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST----TEEEEEECTT-SCEEEEEEECCSCSSGGG-SCSCCEECTTSCEEEEETT-----
T ss_pred CccccccEECCCCCEEEEecCC----CCEEEEEeCC-CCEEEEEeccCCCCcccc-cccCceECCCCCEEEEecC-----
Confidence 2234555556555566654321 1367888874 3345654322111 1111 1112233446666665432
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe--EEE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--W~~ 377 (998)
...+..|+.. ++..|....+.. .+++... ++.++|.+.. ...+..||+.+.+ |+.
T Consensus 145 -~~~v~~~d~~--G~~~w~~~~~~~-----~~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 145 -TSEVREIAPN--GQLLNSVKLSGT-----PFSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp -TTEEEEECTT--SCEEEEEECSSC-----CCEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEE
T ss_pred -CCEEEEECCC--CCEEEEEECCCC-----ccceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEe
Confidence 2357777766 444444333221 1234444 6788887653 2348999999664 654
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=91.42 E-value=19 Score=39.42 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=49.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||+.+..-...-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. .-..+. + ....
T Consensus 120 ~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~-~~~~~~--~---h~~~ 183 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGS-NPRTLI--G---HRAT 183 (420)
T ss_dssp CEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC-CCEEEE--C---CSSC
T ss_pred CEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCc-CceEEc--C---CCCc
Confidence 678888887665444211 11112223333 34566666642 469999998753 112221 1 1111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 184 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp EEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 22334444445677777664 5788898876
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=91.32 E-value=8.6 Score=42.60 Aligned_cols=193 Identities=10% Similarity=-0.016 Sum_probs=92.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+|.+|..+..+..+... +....-++++.. ++.+++.++.+ ..+++||+.+.. .......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~--~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRF---KTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQ--TVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEE---ECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCC--EEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEE---cCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCe--EeeecCcccccccCC
Confidence 788888877766655432 111112223333 56777777642 359999998763 333221101111111
Q ss_pred c-cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCc
Q 001901 230 G-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPL 307 (998)
Q Consensus 230 ~-hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~ 307 (998)
. .+++.-.++.+|+.|+.+ ..+.+||+.+....+... .... .....+... +..+|+.++.+
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~l~~~~~~~------ 233 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGK-----WSKILLYDPIRDLVYCSNWIS------ 233 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSS-----SEEEEEEETTTTEEEEEETTT------
T ss_pred ceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCC-----CeeEEEEcCCCCEEEEEecCC------
Confidence 1 122222344778777654 368899998763333322 1111 112222233 44566666433
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
..++.++.... +..+.. . ....-.++++. +++.+++++...... ......+++||+.+.+-...
T Consensus 234 ~~i~~~d~~~~-~~~~~~-~----~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 234 EDISVIDRKTK-LEIRKT-D----KIGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp TEEEEEETTTT-EEEEEC-C----CCSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCC-cEEEEe-c----CCCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEee
Confidence 24566665533 322221 1 11122333333 454444444322111 01135799999988865443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=90.89 E-value=19 Score=38.29 Aligned_cols=191 Identities=10% Similarity=0.023 Sum_probs=93.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.++++|+.+.+....-..+.. .++++.. ++.+|+.++. .+.+++||+.+....+. +. .+....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~-~~-~~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGR-LV-LDDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEE-EE-SCCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEE-Ee-cCCCcc
Confidence 45799999998865444332211 2333333 3468877653 24799999988642222 22 111111
Q ss_pred -----CCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEec
Q 001901 227 -----PRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGG 299 (998)
Q Consensus 227 -----~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~lyvfGG 299 (998)
+..-+.+++-. ++.+|+.+... -..+++||+.+....+.. ...+.. ....+...+ +.+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~-----~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM-----STGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT-----CCCCEEETTTTEEEEECT
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc-----cceEEECCCCCEEEEEcC
Confidence 11123344433 33677765221 246999999887333322 111111 112223334 45666532
Q ss_pred cCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 300 ~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
...++.++.... +-.+....+.........++++. ++.+|+.... .+.+++||+.+.+...
T Consensus 205 -------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 205 -------DGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILA 267 (353)
T ss_dssp -------TSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEE
T ss_pred -------CCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEE
Confidence 135566666544 32222222111111222233443 4567776421 3569999999887654
Q ss_pred cc
Q 001901 378 TK 379 (998)
Q Consensus 378 v~ 379 (998)
.-
T Consensus 268 ~~ 269 (353)
T 3vgz_A 268 KV 269 (353)
T ss_dssp EE
T ss_pred EE
Confidence 33
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=90.69 E-value=11 Score=44.91 Aligned_cols=111 Identities=16% Similarity=0.260 Sum_probs=61.2
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCc---cceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPPTPR---AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR---~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
.++.||..+.+ |+.-........+. ...+.++.+++||+... ...++.+|..+....|+.-.. .+
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~~---~~ 148 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKFA---DH 148 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEECS---CG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecCC---CC
Confidence 38889988764 88754331100011 11334567888887542 246999999987777986431 11
Q ss_pred CCCc--ccEEEEECC----cEEEEEcCCCC-CCCcccEEEEECCCCCceEEEc
Q 001901 226 GPRY--GHVMALVGQ----RYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 226 ~~R~--~hs~~~~~~----~~Lyv~GG~~g-~~~lndv~~yD~~s~~~~W~~v 271 (998)
...+ ..+-++.++ +.++++|...+ ...-..++.||..+....|+.-
T Consensus 149 ~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 1111 112233332 11344443211 1124579999999988899764
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=90.27 E-value=11 Score=41.53 Aligned_cols=183 Identities=14% Similarity=0.130 Sum_probs=89.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+++||..+.+...+.... ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. ..... ....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~--~~~~~-----~~~~ 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQT--KLRTM-----AGHQ 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCC--EEEEE-----CCCS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCe--EEEEe-----cCCC
Confidence 47899999988876665431 11112222222 34566666542 468999998753 22211 1112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
..-.++.+.+ .+++.|+.++ .+..||+......-..+.... ..........++.+++.|+.++
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~~d~------ 239 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGHS-----SEVCGLAWRSDGLQLASGGNDN------ 239 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECCS-----SCEEEEEECTTSSEEEEEETTS------
T ss_pred CceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCCC-----CCeeEEEEcCCCCEEEEEeCCC------
Confidence 2223334444 5777777654 678888874321222221111 1112222233677777877643
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+..|+.... .-...... ....-.++++. +..+++.||... ...+.+||..+.+...
T Consensus 240 ~v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 240 VVQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARVN 298 (401)
T ss_dssp CEEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEEE
T ss_pred eEEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEEE
Confidence 2344444322 11221111 11112233333 346777775211 2458999998876543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=90.07 E-value=16 Score=38.32 Aligned_cols=149 Identities=15% Similarity=0.060 Sum_probs=72.0
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc-ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~-~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
+..++.|+. ...+.+||+.+.. +...... ..... -.+++...++.+++.|+.++ .+..||+.+
T Consensus 109 ~~~l~~~~~------d~~i~~~d~~~~~--~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~ 172 (337)
T 1gxr_A 109 GCTLIVGGE------ASTLSIWDLAAPT--PRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHN 172 (337)
T ss_dssp SSEEEEEES------SSEEEEEECCCC----EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTT
T ss_pred CCEEEEEcC------CCcEEEEECCCCC--cceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 455666654 2469999998753 3222211 11111 12333333445777777654 588899987
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~- 342 (998)
. +....-.... ..........++..++.|+.++ .+..|+.... .-..... ....-.++++.
T Consensus 173 ~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~-~~~~~~~-----~~~~v~~~~~s~ 234 (337)
T 1gxr_A 173 Q--TLVRQFQGHT----DGASCIDISNDGTKLWTGGLDN------TVRSWDLREG-RQLQQHD-----FTSQIFSLGYCP 234 (337)
T ss_dssp T--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEECT
T ss_pred C--ceeeeeeccc----CceEEEEECCCCCEEEEEecCC------cEEEEECCCC-ceEeeec-----CCCceEEEEECC
Confidence 7 4433221111 1112222333666777776432 3445554433 1111111 11112233332
Q ss_pred CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
++.++++|+.+ ..+.+||..+.+-.
T Consensus 235 ~~~~l~~~~~~---------~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 235 TGEWLAVGMES---------SNVEVLHVNKPDKY 259 (337)
T ss_dssp TSSEEEEEETT---------SCEEEEETTSSCEE
T ss_pred CCCEEEEEcCC---------CcEEEEECCCCCeE
Confidence 56677777643 34889999887643
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=89.75 E-value=29 Score=38.68 Aligned_cols=180 Identities=12% Similarity=0.062 Sum_probs=86.9
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.-..+.+||+.+.+-...-.. ....-.+..+++..++.|+. ...+.+||+.+.. .+.. +...
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~----~~~~---~~~~ 278 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET----CLHT---LQGH 278 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE----EEEE---ECCC
T ss_pred CCCEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcC------CCEEEEEECCCCc----EeEE---ecCC
Confidence 345677788776653322111 01112233335555666654 2468899987742 2221 1111
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
...-.++.+.+ ..++.|+.++ .+..||+.+....+..... .....+... ++.+++.|+.++
T Consensus 279 ~~~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~-~~~~l~~~~~dg----- 339 (445)
T 2ovr_B 279 TNRVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLTGH-------QSLTSGMEL-KDNILVSGNADS----- 339 (445)
T ss_dssp SSCEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEECCC-------CSCEEEEEE-ETTEEEEEETTS-----
T ss_pred CCceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEEcCC-------cccEEEEEE-eCCEEEEEeCCC-----
Confidence 12223333454 5667777654 5888999877322222111 111222333 445666666543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+..++.... .-.... .+.. .....-.++.+++.+++.|+.+ ..+.+||..+.+...
T Consensus 340 -~i~vwd~~~~-~~~~~~-~~~~-~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 340 -TVKIWDIKTG-QCLQTL-QGPN-KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp -CEEEEETTTC-CEEEEE-CSTT-SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred -eEEEEECCCC-cEEEEE-ccCC-CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 2344444332 212111 1110 1112223344467777777753 348899999887543
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=89.10 E-value=27 Score=37.47 Aligned_cols=179 Identities=15% Similarity=0.100 Sum_probs=81.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeee-cCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV-QGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~-~g~~P~~ 227 (998)
.+.++|..+..-...-.. ....-..+.+ ++..++.||.+ ..+.+||+.+.......... .+. .
T Consensus 78 ~v~iWd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h---~ 143 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGH---T 143 (340)
T ss_dssp EEEEEETTTCCEEEEEEC-----SSSCEEEEEECTTSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECC---S
T ss_pred cEEEEECCCCCcceEeec-----CCccEEEEEECCCCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCC---C
Confidence 677888877653322111 0111122222 34666667652 46888998764322222211 111 1
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
..-.++....++. ++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 144 ~~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~d~~---- 207 (340)
T 1got_B 144 GYLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTGHT----GDVMSLSLAPDTRLFVSGACDAS---- 207 (340)
T ss_dssp SCEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC----
T ss_pred ccEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcCCC----CceEEEEECCCCCEEEEEeCCCc----
Confidence 1111222333434 55555543 5788899877 4332211111 11122223346778888876542
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
+..++.... .-.. ...+. ...-.++++. ++.+++.|+.++ .+.+||+.+.+-
T Consensus 208 --v~~wd~~~~-~~~~-~~~~h---~~~v~~v~~~p~~~~l~s~s~d~---------~v~iwd~~~~~~ 260 (340)
T 1got_B 208 --AKLWDVREG-MCRQ-TFTGH---ESDINAICFFPNGNAFATGSDDA---------TCRLFDLRADQE 260 (340)
T ss_dssp --EEEEETTTC-SEEE-EECCC---SSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred --EEEEECCCC-eeEE-EEcCC---cCCEEEEEEcCCCCEEEEEcCCC---------cEEEEECCCCcE
Confidence 233333222 1111 11111 1111223333 567778887543 388899887753
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=89.06 E-value=19 Score=38.56 Aligned_cols=96 Identities=7% Similarity=-0.013 Sum_probs=48.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+|.+|..+.+++.+........| ..++.- ++++|+.+..+ ....+++||+.+. ++..+.... .....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g--~~~~~~~~~--~~~~~ 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKED----DEGGIAAWQIDGQ--TAHKLNTVV--APGTP 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEET----TEEEEEEEEEETT--EEEEEEEEE--EESCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecC----CCceEEEEEecCC--cEEEeeeee--cCCCC
Confidence 578888888888775432111111 123332 45766665321 1357999999664 355444210 01111
Q ss_pred ccEEEEECCc-EEEEEcCCCCCCCcccEEEEECC
Q 001901 230 GHVMALVGQR-YLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 230 ~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
-..+++-.++ .||+.+..+ ..+..||+.
T Consensus 88 p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~ 116 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK-----GTAEVMKIA 116 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT-----TEEEEEEEC
T ss_pred CEEEEECCCCCEEEEEeCCC-----CEEEEEEeC
Confidence 2233344333 566655322 357777774
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=88.94 E-value=21 Score=38.09 Aligned_cols=134 Identities=15% Similarity=0.168 Sum_probs=63.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+.+||+.+.+|..+..... ....-.+++.. ++.+++.|+.+ ..+.+||+.+. ++....... ....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~--~~~~~~~~~--~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGR--TWKPTLVIL--RINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETT--EEEEEEECC--CCSS
T ss_pred CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCC--eeeeeEEee--cCCC
Confidence 378889999887665544310 11111223333 34556666542 46889998775 354443211 1122
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.-.++....++.+++.|+.++ .+..||+.+....+........ ............++.+++.|+.++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKP--IRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTT--CCSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecc--cCCCeeEEEEcCCCCEEEEEcCCC
Confidence 222333334446777777654 4555565544212222211110 011112222333667777777543
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=88.77 E-value=25 Score=36.77 Aligned_cols=181 Identities=12% Similarity=0.109 Sum_probs=84.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.++|..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. .-..+. +. ...
T Consensus 46 ~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~-~~~~~~--~~---~~~ 109 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGK-CLKTLK--GH---SNY 109 (312)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC-EEEEEE--CC---SSC
T ss_pred eEEEEeCCCcccchhhcc----CCCceEEEEEcCCCCEEEEECCC------CEEEEEECCCCc-EEEEEc--CC---CCC
Confidence 567788877776544321 01111222222 34666667642 468999998753 111121 11 111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~d 309 (998)
-.++....++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 110 v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~------ 172 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTG--KCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGL------ 172 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--EEEEEecCCC----CcEEEEEEcCCCCEEEEEeCCCc------
Confidence 12223333445777777665 5788999876 3222111111 01111222336677777775432
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 310 v~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
+..|+.... .......... .......+..-++..++.|+.+ ..+.+||..+.+-.
T Consensus 173 i~~wd~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASG-QCLKTLIDDD--NPPVSFVKFSPNGKYILAATLD---------NTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTC-CEEEEECCSS--CCCEEEEEECTTSSEEEEEETT---------TEEEEEETTTTEEE
T ss_pred EEEEECCCC-ceeeEEeccC--CCceEEEEECCCCCEEEEEcCC---------CeEEEEECCCCcEE
Confidence 334443332 2111111111 1111111122245666777643 35889999887643
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=88.69 E-value=8.5 Score=47.03 Aligned_cols=95 Identities=9% Similarity=0.125 Sum_probs=52.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+||+.+..+..+.... .....-..+.+ . +..++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 32 ~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~--~~~~~~~~---~~ 97 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 97 (753)
T ss_dssp EEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCC--cccccccc---cC
Confidence 6778888877777665431 11112222222 2 4566666642 46889998875 46655522 22
Q ss_pred CCcccEEEEE-CC--cEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 227 PRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 227 ~R~~hs~~~~-~~--~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-..+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 98 h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 98 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 2222223333 32 35788887665 5777887655
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=87.95 E-value=0.21 Score=55.57 Aligned_cols=69 Identities=9% Similarity=0.042 Sum_probs=39.9
Q ss_pred CCeEEEecCCCCHHH-------HHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH------HHHHHHHHhh-hcCCC
Q 001901 698 APIKIFGDLHGQFGD-------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------ETITLLLALK-VEYPN 763 (998)
Q Consensus 698 ~~i~vvGDiHG~~~d-------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------evl~ll~~lk-~~~p~ 763 (998)
-+++++||.|.-... |.++.+.. ..+ -+|++||+++.|..+. +.+..++... ....-
T Consensus 4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~---~pd------~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~ 74 (342)
T 3tgh_A 4 LRFASLGDWGKDTKGQILNAKYFKQFIKNE---RVT------FIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYM 74 (342)
T ss_dssp EEEEECCSCBSCCHHHHHHHHHHHHHHHHT---TCC------EEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCS
T ss_pred EEEEEEecCCCCCchHHHHHHHHHHHHhhc---CCC------EEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCC
Confidence 368999999975432 22223321 112 5889999998887432 2222222210 12223
Q ss_pred cEEEeecCcccc
Q 001901 764 NVHLIRGNHEAA 775 (998)
Q Consensus 764 ~v~llrGNHE~~ 775 (998)
-++.+.||||..
T Consensus 75 P~~~vlGNHD~~ 86 (342)
T 3tgh_A 75 PFFTVLGTRDWT 86 (342)
T ss_dssp EEEECCCHHHHT
T ss_pred CEEEeCCCCccC
Confidence 479999999975
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=87.40 E-value=12 Score=45.21 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=54.0
Q ss_pred CCcEEEEECCCCcEEEecCCCCCC---------------CCc----c-ceEEEEe-CCEEEEEeCCCCCCCCcccEEEEE
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPP---------------TPR----A-AHVATAV-GTMVVIQGGIGPAGLSAEDLHVLD 207 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P---------------~pR----~-~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~D 207 (998)
...++++|+.+.+...+....... ..| . -.+.+.- +++.++++.. ..++++|
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-------~~i~~~d 135 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-------GELYLYD 135 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-------TEEEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-------CcEEEEE
Confidence 458999999999887765421101 000 0 1122222 3444444442 6799999
Q ss_pred cCCC---CCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccC
Q 001901 208 LTQQ---RPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (998)
Q Consensus 208 l~t~---t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~ 274 (998)
+.+. . -..+. .....-...+.-.+++.++++.. +.++.+|+.+. +...+...
T Consensus 136 ~~~~~~~~--~~~l~-----~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g--~~~~~~~~ 190 (741)
T 2ecf_A 136 LKQEGKAA--VRQLT-----HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASG--RQMQLTAD 190 (741)
T ss_dssp SSSCSTTS--CCBCC-----CSSSCEEEEEECTTSSEEEEEET------TEEEEEETTTT--EEEECCCC
T ss_pred CCCCCcce--EEEcc-----cCCcccccccCCCCCCEEEEEeC------CcEEEEecCCC--CEEEeccC
Confidence 9875 2 22221 11111222333334444555432 37999999888 77766543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=87.27 E-value=42 Score=39.94 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=56.0
Q ss_pred cccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC
Q 001901 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS 332 (998)
Q Consensus 253 lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~ 332 (998)
...++++|+.+. +-..+..... ............+++.++++..+... ....++.++..+...+........ ..
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTGEP--KEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCCSC--TTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred eeEEEEEECCCC--ceEeeccCCC--CceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CC
Confidence 357999999887 5555432111 11111222333466655555443322 345677776654323333221111 00
Q ss_pred Cc-ceeEEEEE---CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 333 PR-YQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 333 pR-~~hsav~~---~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
.. ....+++. ++++++.+..++ ...+|.+|........+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecC
Confidence 00 01122332 677666664432 356999998777776664
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.26 E-value=25 Score=37.30 Aligned_cols=191 Identities=8% Similarity=-0.005 Sum_probs=85.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||+.+.+-...-.. .. ..-.+++.. ++..++.|+. ...+.+||+.+.. ...... ....
T Consensus 55 ~i~vwd~~~~~~~~~~~~---h~-~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~--~~~~~~-----~~~~ 117 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDG---HT-GTIWSIDVDCFTKYCVTGSA------DYSIKLWDVSNGQ--CVATWK-----SPVP 117 (369)
T ss_dssp CEEEEETTTCCEEEEECC---CS-SCEEEEEECTTSSEEEEEET------TTEEEEEETTTCC--EEEEEE-----CSSC
T ss_pred EEEEEeCCCchhhhhhhh---cC-CcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCc--EEEEee-----cCCC
Confidence 678889887654433211 01 111222222 3455666654 2469999998763 222221 1112
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC--ceEEEcccCCC-----CCCCccceEEEEEeCCEEEEEeccCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP--YEWRKLEPEGE-----GPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~--~~W~~v~~~~~-----~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
-.++....++..++.++.+.......+..||+.+.. ..+........ ..........+...++.+++.|+.++
T Consensus 118 v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 118 VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 223334444456666655422223466777765442 12222211100 00000112222234566677776542
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+..|+............. ....-.++++. ++.+++.|+.+ ..+.+||..+.+...
T Consensus 198 ------~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 198 ------KISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSRD---------TNSFLVDVSTLQVLK 254 (369)
T ss_dssp ------EEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred ------EEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecCC---------ceEEEEECCCCceee
Confidence 3455555442222211111 11112223333 56666777642 358899998876543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=86.92 E-value=15 Score=38.93 Aligned_cols=53 Identities=13% Similarity=0.109 Sum_probs=31.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~ 211 (998)
+.++++|+.+.+....-..+ .....+.++.. ++.+|+.+.. ...+++||+.+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~ 75 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTC 75 (349)
T ss_dssp TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCC
Confidence 47899999998765443332 10012334443 3367777642 256999999875
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=86.57 E-value=33 Score=37.10 Aligned_cols=102 Identities=10% Similarity=0.164 Sum_probs=50.9
Q ss_pred cEEEEECCCCc------EEEecCCCCCCCCccceEEEEe-----CCEE-EEEeCCCCCCCCcccEEEEEcCC------CC
Q 001901 151 DVHCYDVLTNK------WSRITPFGEPPTPRAAHVATAV-----GTMV-VIQGGIGPAGLSAEDLHVLDLTQ------QR 212 (998)
Q Consensus 151 dv~~yD~~t~~------W~~l~~~g~~P~pR~~hsa~~~-----~~~l-yVfGG~~~~~~~~~dv~~~Dl~t------~t 212 (998)
.+.+||+.+.. +..+...........-.+++.. ++.. ++.|+.+ ..+.+||+.+ ..
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYIWKFHPFADESNSL 165 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------SCEEEEEEESSSSHHHHT
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEEEeCCccccccccc
Confidence 67788887766 7776543100000122233333 2344 6666642 4688888876 21
Q ss_pred -CceE---Eeee--cCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 213 -PRWH---RVVV--QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 213 -~~W~---~l~~--~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..|. .+.. .........-.++....++ +++.|+.++ .+..||+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~ 217 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL 217 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC
Confidence 1222 1110 0001112223445555565 777777654 6888999877
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.35 E-value=7.2 Score=42.66 Aligned_cols=190 Identities=13% Similarity=0.036 Sum_probs=86.1
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE--CCcEEEEEcCCCCCCCcccEEEEEC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~--~~~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
++..++.|+.+ ..+.+||+.+.. .+.. +......-.++.+ .+..+++.|+.++ .+..||+
T Consensus 138 dg~~l~sgs~d------~~i~iwd~~~~~----~~~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 138 SGTQAVSGSKD------ICIKVWDLAQQV----VLSS---YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTE----EEEE---ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc----EEEE---EcCcCCceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 34666667642 458999998752 2221 1111111122222 2225777787765 5778898
Q ss_pred CCCCceEEEcccCCCCCCCccceEEEEE--eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001901 262 AAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (998)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsa 339 (998)
.+... -..+..... .....++.. .++.+++.|+.++. +..++......-... .+. ...-.++
T Consensus 200 ~~~~~-~~~~~~~~~----~~~~~~~~~~p~~~~~l~sg~~dg~------v~~wd~~~~~~~~~~--~~h---~~~v~~v 263 (344)
T 4gqb_B 200 RCPKP-ASQIGCSAP----GYLPTSLAWHPQQSEVFVFGDENGT------VSLVDTKSTSCVLSS--AVH---SQCVTGL 263 (344)
T ss_dssp TSSSC-EEECC--------CCCEEEEEECSSCTTEEEEEETTSE------EEEEESCC--CCEEE--ECC---SSCEEEE
T ss_pred cccce-eeeeeccee----eccceeeeecCCCCcceEEeccCCc------EEEEECCCCcEEEEE--cCC---CCCEEEE
Confidence 77621 112211110 111222222 25677888875432 333333222100000 110 1111223
Q ss_pred EEE-C-CEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE--C
Q 001901 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--G 415 (998)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~ 415 (998)
++. + .++++.|+.++ .|.+||..+.+-.++... . ... .+++.. +
T Consensus 264 ~fsp~g~~~lasgs~D~---------~i~vwd~~~~~~~~~~~H--~--------------------~~V-~~v~~sp~~ 311 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDC---------SLAVLDSSLSELFRSQAH--R--------------------DFV-RDATWSPLN 311 (344)
T ss_dssp EECSSSSCCEEEEETTS---------CEEEECTTCCEEEEECCC--S--------------------SCE-EEEEECSSS
T ss_pred EEccCCCeEEEEEeCCC---------eEEEEECCCCcEEEEcCC--C--------------------CCE-EEEEEeCCC
Confidence 333 2 35777777543 388899988764433211 0 111 122222 4
Q ss_pred CEEEEEcCCCCCCCcccEEEecccccc
Q 001901 416 DLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 416 ~~LyVfGG~~~~~~l~Dv~~ld~~~~~ 442 (998)
..|++-||.++... +|.++...++
T Consensus 312 ~~llas~s~D~~v~---~w~v~~~~~~ 335 (344)
T 4gqb_B 312 HSLLTTVGWDHQVV---HHVVPTEPLP 335 (344)
T ss_dssp TTEEEEEETTSCEE---EEECCC----
T ss_pred CeEEEEEcCCCeEE---EEECCCCCCC
Confidence 46888888876653 5666655544
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.21 E-value=25 Score=38.18 Aligned_cols=183 Identities=11% Similarity=-0.015 Sum_probs=84.4
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCC-----------CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceE
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPT-----------PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~-----------pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~ 216 (998)
....+.+||+.+.+....-.....+. ...-.+++...+..++.|+. ...+++||+.+.....
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~i~~~d~~~~~~~~- 241 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------KGAIFVYQITEKTPTG- 241 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG------GGCEEEEETTCSSCSE-
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------CCeEEEEEcCCCceee-
Confidence 34578889988776544332211110 00022233333334555654 2579999998753112
Q ss_pred EeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEE
Q 001901 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (998)
Q Consensus 217 ~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyv 296 (998)
.+. .....-.+++...++.+++.|+.++ .+..||+.+........... ..........++ +++
T Consensus 242 ~~~-----~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 242 KLI-----GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFYGHS------QSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEC-----CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEECCCS------SCEEEEEEETTT-EEE
T ss_pred eec-----cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEecCCC------ccEEEEEECCCC-EEE
Confidence 121 1111223344444445777777554 57888887653222221110 112222333455 666
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 297 fGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.|+.++ .+..|+.... .-...... ....-.++++. ++.+++.|+.+ ..+.+||..+.+
T Consensus 305 ~~~~d~------~i~i~d~~~~-~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 305 SCSMDG------SVRLWSLKQN-TLLALSIV----DGVPIFAGRISQDGQKYAVAFMD---------GQVNVYDLKKLN 363 (425)
T ss_dssp EEETTS------EEEEEETTTT-EEEEEEEC----TTCCEEEEEECTTSSEEEEEETT---------SCEEEEECHHHH
T ss_pred EEeCCC------cEEEEECCCC-cEeEeccc----CCccEEEEEEcCCCCEEEEEECC---------CeEEEEECCCCc
Confidence 666442 3444444332 21111111 01111222332 46677777643 248888887654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.84 E-value=40 Score=35.90 Aligned_cols=148 Identities=14% Similarity=0.175 Sum_probs=74.1
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~ 265 (998)
.+++.|+. ...+.+||+.+.. .-..+. .+ + ..-.+++...++..++.|+.++ .+..||+.+..
T Consensus 93 ~~l~s~s~------D~~i~lWd~~~~~-~~~~~~-~~--~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~ 155 (321)
T 3ow8_A 93 PIAASSSL------DAHIRLWDLENGK-QIKSID-AG--P--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGK 155 (321)
T ss_dssp SEEEEEET------TSEEEEEETTTTE-EEEEEE-CC--T--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTCS
T ss_pred CEEEEEeC------CCcEEEEECCCCC-EEEEEe-CC--C--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCc
Confidence 56666664 2568899998753 112221 11 1 1122344444556777777654 57788887763
Q ss_pred ceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC
Q 001901 266 YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA 344 (998)
Q Consensus 266 ~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~ 344 (998)
..+...... ......+...++++++.|+.++. +..++.... +-.. ...+. . ..-.++++. ++
T Consensus 156 ~~~~~~~~~------~~v~~~~~spdg~~lasg~~dg~------i~iwd~~~~-~~~~-~~~~h--~-~~v~~l~~spd~ 218 (321)
T 3ow8_A 156 KEYSLDTRG------KFILSIAYSPDGKYLASGAIDGI------INIFDIATG-KLLH-TLEGH--A-MPIRSLTFSPDS 218 (321)
T ss_dssp EEEEEECSS------SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEE-EECCC--S-SCCCEEEECTTS
T ss_pred eeEEecCCC------ceEEEEEECCCCCEEEEEcCCCe------EEEEECCCC-cEEE-EEccc--C-CceeEEEEcCCC
Confidence 333322111 11222233346778888876532 344444333 2111 11111 0 011123332 56
Q ss_pred EEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+++.|+.++ .+.+||..+.+..
T Consensus 219 ~~l~s~s~dg---------~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 219 QLLVTASDDG---------YIKIYDVQHANLA 241 (321)
T ss_dssp CEEEEECTTS---------CEEEEETTTCCEE
T ss_pred CEEEEEcCCC---------eEEEEECCCccee
Confidence 7888887543 3888998877643
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=85.81 E-value=32 Score=41.04 Aligned_cols=160 Identities=12% Similarity=0.027 Sum_probs=74.5
Q ss_pred cccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCC
Q 001901 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (998)
Q Consensus 200 ~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~ 279 (998)
...++++|+.+.. -..+.. + .....+-..++...+++.++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQT-G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTE--EEECCC-C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCCc--eEeecc-C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 4679999998752 333321 1 111122223333344454555444443445689999997751 3333321111000
Q ss_pred CccceEEEEEe--CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeE-EEEE-CC-EEEEEcccCC
Q 001901 280 PCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA-AVFV-NA-RLHVSGGALG 354 (998)
Q Consensus 280 ~r~~~~a~~~~--~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hs-av~~-~~-~L~V~GG~~~ 354 (998)
........... ++++++.+..++ ...+|.++.... ....+... ...... .++. ++ .|++.+..++
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~---~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR---LIRQVTKG---EWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC---EEEECCCS---SSCEEEEEEECTTSSEEEEEESSSC
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC---EEEecCCC---CeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00011223334 777666665442 356777764332 22333221 111112 2222 34 5655554322
Q ss_pred CCCccccCCeEEEEECCCCeEEEcc
Q 001901 355 GGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 355 ~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
.. ...+|.+|..+.+...+.
T Consensus 379 ~~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 379 PL-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TT-----CBEEEEEETTCCCCEESC
T ss_pred Cc-----eEEEEEEEcCCCCceecc
Confidence 11 356999999888766554
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=85.76 E-value=62 Score=38.04 Aligned_cols=82 Identities=11% Similarity=0.025 Sum_probs=45.8
Q ss_pred CEEEEEeCCC---------CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE----CCc--EEEEEcCCCC
Q 001901 185 TMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIGGNDG 249 (998)
Q Consensus 185 ~~lyVfGG~~---------~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~----~~~--~Lyv~GG~~g 249 (998)
+.||+..|.. ....+...++.+|..+....|+.-....+...-+...+.+++ +++ ++++++..++
T Consensus 247 g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G 326 (571)
T 2ad6_A 247 NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG 326 (571)
T ss_dssp TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS
T ss_pred CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc
Confidence 5777765531 122234579999999877789865422111111111122222 232 3666665543
Q ss_pred CCCcccEEEEECCCCCceEEEc
Q 001901 250 KRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 250 ~~~lndv~~yD~~s~~~~W~~v 271 (998)
.++++|..+....|..-
T Consensus 327 -----~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 327 -----ILYTLNRENGNLIVAEK 343 (571)
T ss_dssp -----EEEEEETTTCCEEEEEE
T ss_pred -----EEEEEECCCCCEEeeec
Confidence 68899998887778753
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=85.53 E-value=18 Score=36.84 Aligned_cols=197 Identities=7% Similarity=-0.099 Sum_probs=94.5
Q ss_pred cEEEEECCC-CcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLT-NKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t-~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.++++|+.+ .+...+... +....-..++.. +++.+++++.... ....+|.++..+.. ...+. ... .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~--~~~~~---~~~--~ 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTG---FATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT--PRLMT---KNL--P 130 (297)
T ss_dssp EEEEEESSSCCSCEECCCT---TCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC--CEECC---SSS--S
T ss_pred eEEEEeCCCCCCceEeccc---cccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc--eEEee---cCC--C
Confidence 789999998 777766533 111111222222 4455555543222 23578889887653 33332 111 1
Q ss_pred cccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec-cCCCCCC
Q 001901 229 YGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG-RDASSVP 306 (998)
Q Consensus 229 ~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG-~~~~~~~ 306 (998)
...+....++ .|++.++.++. ..+|.+|+.+. ....+..... .........+++.+++++ .++
T Consensus 131 -~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~---- 195 (297)
T 2ojh_A 131 -SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHGEG-----RNDGPDYSPDGRWIYFNSSRTG---- 195 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCSSS-----CEEEEEECTTSSEEEEEECTTS----
T ss_pred -ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccCCC-----ccccceECCCCCEEEEEecCCC----
Confidence 2223333233 45545554432 37888888776 5555543221 112223334555444443 232
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCcc--ccCCeEEEEECCCCeEEEccc
Q 001901 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV--EDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 307 ~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~--~~~~dv~vyD~~t~~W~~v~~ 380 (998)
...+|.++.... ........ ......+.+. +++.+++++..+..... .....++++|+.+.+...+..
T Consensus 196 ~~~i~~~~~~~~---~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 196 QMQIWRVRVDGS---SVERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp SCEEEEEETTSS---CEEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred CccEEEECCCCC---CcEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 346777764433 22222221 1111222222 55555555543321100 012569999999988766554
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=85.51 E-value=30 Score=38.36 Aligned_cols=93 Identities=13% Similarity=0.146 Sum_probs=51.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.++++|..+++...+-... .....-.++.+ ++..++.|+.+ ..+.+||+.+.. .+.. +...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~----~~~~---~~~h 188 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQK----RLRN---MTSH 188 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE----EEEE---ECCC
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCc----EEEE---EeCC
Confidence 47999999998876654321 11111223333 34666667642 468999998752 2221 1111
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.....+...++ .+++.|+.++ .++.+|....
T Consensus 189 ~~~v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 189 SARVGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp SSCEEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred CCceEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 22223334444 5777777654 5667777654
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=85.47 E-value=42 Score=35.99 Aligned_cols=98 Identities=7% Similarity=0.075 Sum_probs=47.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC-C
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-P 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~-~ 227 (998)
.+|.+|..+.+++.+... ....|+ .++.. +..||+.+..+. ....+.+|++...+.+...+... +. .
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~---~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~---~~~~ 99 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPS---YLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQ---KTMG 99 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCC---SEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEE---ECSS
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCc---eEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEe---ccCC
Confidence 466778888888776543 112221 12222 336666654311 12456566555432245555421 11 1
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-+.++. .++.||+.+..+ ..+..|++.+.
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred CCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCCC
Confidence 12222333 555677665322 36778887643
|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
Probab=85.46 E-value=51 Score=36.80 Aligned_cols=62 Identities=16% Similarity=0.042 Sum_probs=35.4
Q ss_pred cccEEEEECCcEEEEEcCCCC----CCCcccEEEEEC----CCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec
Q 001901 229 YGHVMALVGQRYLMAIGGNDG----KRPLADVWALDT----AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g----~~~lndv~~yD~----~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG 299 (998)
..|++++..++.+|.+|-... .....+...-.. ... +...+.. ...|+.++..++.+|.+|-
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE--KMSMVAC-------GWRHTISVSYSGALYTYGW 251 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTC--CEEEEEE-------CSSEEEEEETTCCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCc--eEEEEEE-------CCCcEEEEcCCCCEEEeeC
Confidence 468888888889999995421 111111111110 111 2333322 2467777788999999994
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=85.27 E-value=0.48 Score=55.88 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=42.3
Q ss_pred CCeEEEecCCCCHH----------------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh----------HHHH
Q 001901 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS----------LETI 751 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s----------~evl 751 (998)
..|+.++|+||++. .|..+++....... ..-+|+.||.++..+.+ ..++
T Consensus 20 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 20 IAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp EEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred EEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 45889999999863 56666666532211 11345579999987543 3455
Q ss_pred HHHHHhhhcCCCcEEEeecCccc
Q 001901 752 TLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 752 ~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|-.+. --++..||||.
T Consensus 95 ~~ln~lg-----~D~~t~GNHef 112 (527)
T 3qfk_A 95 DFYNRMA-----FDFGTLGNHEF 112 (527)
T ss_dssp HHHHHTC-----CCEECCCGGGG
T ss_pred HHHHhcC-----CcEEecccccc
Confidence 5555553 22566899995
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.25 E-value=42 Score=35.69 Aligned_cols=179 Identities=15% Similarity=0.142 Sum_probs=87.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.++|+.+.+-...-..+ +.. ..+++.. ++..++.|+. ...+.+||+.+....+. +. ....
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~~~--~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~-~~-----~~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--PVD--AWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYS-LD-----TRGK 165 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--TTC--CCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEE-EE-----CSSS
T ss_pred CcEEEEECCCCCEEEEEeCC--Ccc--EEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEE-ec-----CCCc
Confidence 46788898887643322211 111 1122322 3466666664 24688999987642222 21 1112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.+++...++.+++.|+.++ .+..||+.+. +-...-.... ......+...++.+++.|+.++.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h~----~~v~~l~~spd~~~l~s~s~dg~----- 229 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGHA----MPIRSLTFSPDSQLLVTASDDGY----- 229 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCCCEEEECTTSCEEEEECTTSC-----
T ss_pred eEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEcccC----CceeEEEEcCCCCEEEEEcCCCe-----
Confidence 223333444556777887765 5788999877 4322211111 01112233346778888876532
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
+..++.... .... ...+. ...-.++++. ++.+++.|+.++ .+.++|+.+.+-
T Consensus 230 -i~iwd~~~~-~~~~-~~~~h---~~~v~~~~~sp~~~~l~s~s~D~---------~v~iwd~~~~~~ 282 (321)
T 3ow8_A 230 -IKIYDVQHA-NLAG-TLSGH---ASWVLNVAFCPDDTHFVSSSSDK---------SVKVWDVGTRTC 282 (321)
T ss_dssp -EEEEETTTC-CEEE-EECCC---SSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred -EEEEECCCc-ceeE-EEcCC---CCceEEEEECCCCCEEEEEeCCC---------cEEEEeCCCCEE
Confidence 333333322 1111 11111 1111222332 566777777543 388899887754
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=84.99 E-value=0.38 Score=56.62 Aligned_cols=70 Identities=20% Similarity=0.140 Sum_probs=41.3
Q ss_pred CCeEEEecCCCCHH----------HHHHHHHHcCCCCC-CCCccceeEEEeccccCCCCC-----hHHHHHHHHHhhhcC
Q 001901 698 APIKIFGDLHGQFG----------DLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQH-----SLETITLLLALKVEY 761 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----------dL~~il~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~lk~~~ 761 (998)
.+|+.++|+||.+. .+..+++.+.-... .+ ...-+|+.||+++..+. ...++.+|-.|.
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~--~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg--- 83 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEG--GSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG--- 83 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHT--CEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccC--CCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---
Confidence 45889999999853 45555554321000 00 00147779999976542 234555555553
Q ss_pred CCcEEEeecCccc
Q 001901 762 PNNVHLIRGNHEA 774 (998)
Q Consensus 762 p~~v~llrGNHE~ 774 (998)
-.++..||||.
T Consensus 84 --~d~~~~GNHEf 94 (516)
T 1hp1_A 84 --YDAMAIGNHEF 94 (516)
T ss_dssp --CCEEECCGGGG
T ss_pred --CCEEeeccccc
Confidence 23677899997
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=84.44 E-value=55 Score=36.29 Aligned_cols=172 Identities=14% Similarity=0.110 Sum_probs=83.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~ 230 (998)
.+.+||+.+.+-...-.. ....-.+..+.+.+++.|+.+ ..+.+||+.+.. .-..+ ......
T Consensus 140 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~-~~~~~------~~h~~~ 201 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVG-----HTGGVWSSQMRDNIIISGSTD------RTLKVWNAETGE-CIHTL------YGHTST 201 (445)
T ss_dssp CEEEEETTTCCEEEECCC-----CSSCEEEEEEETTEEEEEETT------SCEEEEETTTTE-EEEEE------CCCSSC
T ss_pred cEEEEECCCCcEEEEEcC-----CCCCEEEEEecCCEEEEEeCC------CeEEEEECCcCc-EEEEE------CCCCCc
Confidence 678889887664332211 011112222334455666642 468999998753 11111 111122
Q ss_pred cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001901 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (998)
Q Consensus 231 hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv 310 (998)
-.++.+.+ ..++.|+.++ .+..||+.+....+...... ....++.. ++..++.|+.++. +
T Consensus 202 v~~~~~~~-~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~-------~~v~~~~~-~~~~l~~~~~dg~------i 261 (445)
T 2ovr_B 202 VRCMHLHE-KRVVSGSRDA-----TLRVWDIETGQCLHVLMGHV-------AAVRCVQY-DGRRVVSGAYDFM------V 261 (445)
T ss_dssp EEEEEEET-TEEEEEETTS-----EEEEEESSSCCEEEEEECCS-------SCEEEEEE-CSSCEEEEETTSC------E
T ss_pred EEEEEecC-CEEEEEeCCC-----EEEEEECCCCcEEEEEcCCc-------ccEEEEEE-CCCEEEEEcCCCE------E
Confidence 22333344 3567777654 68889988763223222111 11222223 6777777775432 3
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
..++.... .-.... .+. ...-.++.+++..++.|+.+ ..+.+||..+.+-
T Consensus 262 ~iwd~~~~-~~~~~~-~~~----~~~v~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 262 KVWDPETE-TCLHTL-QGH----TNRVYSLQFDGIHVVSGSLD---------TSIRVWDVETGNC 311 (445)
T ss_dssp EEEEGGGT-EEEEEE-CCC----SSCEEEEEECSSEEEEEETT---------SCEEEEETTTCCE
T ss_pred EEEECCCC-cEeEEe-cCC----CCceEEEEECCCEEEEEeCC---------CeEEEEECCCCCE
Confidence 34443322 111111 111 11122333477777777753 3488999988764
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=84.19 E-value=36 Score=41.09 Aligned_cols=178 Identities=11% Similarity=0.059 Sum_probs=84.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||..+......-.. .... -.+++.. ++..++.|+. ...+.+||+.+.. ...... + ....
T Consensus 36 ~v~iwd~~~~~~~~~~~~---~~~~-v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~--~~~~~~-~---~~~~ 99 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQV---TETP-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE--KVVDFE-A---HPDY 99 (814)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSC-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC--EEEEEE-C---CSSC
T ss_pred EEEEEECCCCceEEEEec---CCCc-EEEEEEeCCCCEEEEEeC------CCeEEEEECCCCc--EEEEEe-c---CCCC
Confidence 688899888765433221 1111 1222222 3455666654 2469999998753 322211 1 1111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCCCc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSVPL 307 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~lyvfGG~~~~~~~~ 307 (998)
-.+++...++..++.|+.++ .+..||+.+.. .....-.... ....++... ++.+++.|+.++
T Consensus 100 v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~~~dg----- 163 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDR----- 163 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEECCS-----SCEEEEEEETTEEEEEEEEETTS-----
T ss_pred EEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcCCC-----CcEEEEEEEcCCCCEEEEEeCCC-----
Confidence 22333333445666776554 57788886641 2222211111 112223332 567777777543
Q ss_pred ccEEEEecCCCC-eEEEEECCCCCCCCcceeEEEEE---CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 308 ASAYGLAKHRDG-RWEWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 308 ~dv~~~~~~~~~-~W~w~~~~g~~P~pR~~hsav~~---~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.+..++..... .+... .. ....-..+++. ++.++++|+.+ ..+.+||..+.+-
T Consensus 164 -~v~vwd~~~~~~~~~~~--~~---~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 164 -TVKVWSLGQSTPNFTLT--TG---QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEEETTCSSCSEEEE--CC---CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTEE
T ss_pred -eEEEEECCCCcceeEEe--cC---CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCcE
Confidence 23444432221 11211 11 11111223332 56777777653 3488999887763
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=84.03 E-value=31 Score=36.71 Aligned_cols=101 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee---ecCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---VQGPG 224 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~---~~g~~ 224 (998)
..+++||+.+.+++.+.... .....-..++.. +..+|+.+.. ...+.+||+... .+...+. ..+..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~-g~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAAD-GALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTT-SCEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCC-CCeeecceeecCCCC
Confidence 47889999888877665420 001111233333 3367766532 246888888532 1233322 22222
Q ss_pred CCCC----cccEEEEECCcEEEEEcCCCCCCCcccEEEEECC-CC
Q 001901 225 PGPR----YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA-AK 264 (998)
Q Consensus 225 P~~R----~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~-s~ 264 (998)
|.+| .-+.+++-.++.+|+.+..+ +.+++||+. +.
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g 173 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAG 173 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTS
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCC
Confidence 3222 23344444455677655432 368888887 44
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=83.70 E-value=51 Score=35.38 Aligned_cols=114 Identities=5% Similarity=-0.036 Sum_probs=52.4
Q ss_pred cccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC
Q 001901 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP 331 (998)
Q Consensus 253 lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P 331 (998)
...++.+|+.+. +...+.... .......... ++..+++............+|.++.... . +..+....+
T Consensus 167 ~~~l~~~d~~~g--~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~--~~~l~~~~~ 236 (396)
T 3c5m_A 167 TCRLIKVDIETG--ELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-N--VRKIKEHAE 236 (396)
T ss_dssp CEEEEEEETTTC--CEEEEEEES-----SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-C--CEESSCCCT
T ss_pred cceEEEEECCCC--cEEeeccCC-----cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-c--eeEeeccCC
Confidence 357999999887 665554211 1222223333 3443333322221111246777776433 2 222222101
Q ss_pred CCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 332 SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 332 ~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
.......++. +++.+++........ ...++++|+.+.+...+...
T Consensus 237 -~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~ 282 (396)
T 3c5m_A 237 -GESCTHEFWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMVM 282 (396)
T ss_dssp -TEEEEEEEECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEEC
T ss_pred -CccccceEECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeeeC
Confidence 1111122232 455444443322111 23499999999887766543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=83.34 E-value=46 Score=36.75 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=47.2
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.-..+.++|+.+.+-...... ... ...+...++.+++.|+.+ ..++++|.......-..+. +. .
T Consensus 167 ~Dg~v~iWd~~~~~~~~~~~~---h~~--~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~--~h---~ 230 (420)
T 4gga_A 167 SSAEVQLWDVQQQKRLRNMTS---HSA--RVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLS--GH---S 230 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECC---CSS--CEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--CC---S
T ss_pred CCCeEEEEEcCCCcEEEEEeC---CCC--ceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEec--cc---c
Confidence 445788899888764333221 111 223344455666666642 4678888776421111221 11 1
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-.......++..++.|+.++ .+..+|..+.
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred cceeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 1111222223335666676654 4566776554
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=83.22 E-value=20 Score=39.92 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=71.3
Q ss_pred eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECC
Q 001901 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 183 ~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
.++..++.|+.+ ..+.+||+.+.. -.... ......-.++.+.+ .+++.|+.++ .+..||+.
T Consensus 141 ~d~~~l~~g~~d------g~i~iwd~~~~~--~~~~~-----~~h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~ 201 (435)
T 1p22_A 141 YDDQKIVSGLRD------NTIKIWDKNTLE--CKRIL-----TGHTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVN 201 (435)
T ss_dssp CCSSEEEEEESS------SCEEEEESSSCC--EEEEE-----CCCSSCEEEEECCS-SEEEEEETTS-----CEEEEESS
T ss_pred ECCCEEEEEeCC------CeEEEEeCCCCe--EEEEE-----cCCCCcEEEEEECC-CEEEEEcCCC-----eEEEEECC
Confidence 355566666642 569999988753 22111 11122223334444 6788887765 57888988
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE-EECCCCCCCCcceeEEEE
Q 001901 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVF 341 (998)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w-~~~~g~~P~pR~~hsav~ 341 (998)
+. +-...-... .....++ ...+.+++.|+.++. +..++......... ....+. ...-.++.
T Consensus 202 ~~--~~~~~~~~h-----~~~v~~l-~~~~~~l~s~s~dg~------i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~ 263 (435)
T 1p22_A 202 TG--EMLNTLIHH-----CEAVLHL-RFNNGMMVTCSKDRS------IAVWDMASPTDITLRRVLVGH----RAAVNVVD 263 (435)
T ss_dssp SC--CEEEEECCC-----CSCEEEE-ECCTTEEEEEETTSC------EEEEECSSSSCCEEEEEECCC----SSCEEEEE
T ss_pred CC--cEEEEEcCC-----CCcEEEE-EEcCCEEEEeeCCCc------EEEEeCCCCCCceeeeEecCC----CCcEEEEE
Confidence 77 322211111 1112222 234556667765432 33333332211111 111111 11122333
Q ss_pred ECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 342 VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 342 ~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.++..++.|+.+ ..+.+||+.+.+-
T Consensus 264 ~~~~~l~s~~~d---------g~i~vwd~~~~~~ 288 (435)
T 1p22_A 264 FDDKYIVSASGD---------RTIKVWNTSTCEF 288 (435)
T ss_dssp EETTEEEEEETT---------SEEEEEETTTCCE
T ss_pred eCCCEEEEEeCC---------CeEEEEECCcCcE
Confidence 366666677643 3488999988754
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=83.19 E-value=33 Score=37.07 Aligned_cols=202 Identities=11% Similarity=-0.021 Sum_probs=93.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+|.+|+.+.+...+... +.......+..-++ .|++.... ..++++|+.+.. -..+. ..|...
T Consensus 60 ~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~spdg~~l~~~~~~-------~~l~~~d~~~g~--~~~~~---~~~~~~ 124 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEG---RGDNTFGGFLSPDDDALFYVKDG-------RNLMRVDLATLE--ENVVY---QVPAEW 124 (388)
T ss_dssp CEEEEEETTTCEEEECCCS---SCBCSSSCEECTTSSEEEEEETT-------TEEEEEETTTCC--EEEEE---ECCTTE
T ss_pred ceEEEEeCCCCceEEeeeC---CCCCccceEEcCCCCEEEEEeCC-------CeEEEEECCCCc--ceeee---echhhc
Confidence 3799999999988877643 22111111222234 44444421 479999998863 33333 223322
Q ss_pred cccEEEE-ECCcEEEEEc---CCC--------------CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe
Q 001901 229 YGHVMAL-VGQRYLMAIG---GND--------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290 (998)
Q Consensus 229 ~~hs~~~-~~~~~Lyv~G---G~~--------------g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~ 290 (998)
....... -.++.+++.- +.+ .......++.+|+.+. +-..+..... .........
T Consensus 125 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~~~~~~~sp 197 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQENQ-----WLGHPIYRP 197 (388)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEESS-----CEEEEEEET
T ss_pred ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecCCc-----cccccEECC
Confidence 2212211 1222233210 000 0112368999999887 4444432211 222333444
Q ss_pred -CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEE
Q 001901 291 -DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVL 368 (998)
Q Consensus 291 -~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vy 368 (998)
+++.++|............+|.++.... ....+.... ........++. +++.+++........ ...++++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~ 269 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTHA-EGESCTHEFWVPDGSALVYVSYLKGSP----DRFIYSA 269 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCCC-TTEEEEEEEECTTSSCEEEEEEETTCC----CEEEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeCC-CCcccccceECCCCCEEEEEecCCCCC----cceEEEE
Confidence 5665555443322222457787776543 122222211 11111122222 455333322221110 2359999
Q ss_pred ECCCCeEEEcccC
Q 001901 369 DTAAGVWCDTKSV 381 (998)
Q Consensus 369 D~~t~~W~~v~~~ 381 (998)
|+++.+-+.+...
T Consensus 270 d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 270 DPETLENRQLTSM 282 (388)
T ss_dssp CTTTCCEEEEEEE
T ss_pred ecCCCceEEEEcC
Confidence 9999987666544
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=82.36 E-value=39 Score=40.86 Aligned_cols=182 Identities=10% Similarity=0.022 Sum_probs=86.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||..+.+....-.. .. ..-.+++.. ++..++.|+. ...+.+||+.+. |........ ...
T Consensus 77 g~i~vw~~~~~~~~~~~~~---~~-~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~---~~~~~~~~~--~~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA---HP-DYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTFEG--HEH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC---CS-SCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT---SEEEEEEEC--CSS
T ss_pred CeEEEEECCCCcEEEEEec---CC-CCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC---ceEEEEEcC--CCC
Confidence 3688899988776443221 01 111122222 3444555553 246889998875 333321111 111
Q ss_pred cccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCC
Q 001901 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (998)
Q Consensus 229 ~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~lyvfGG~~~~~~ 305 (998)
.-.+++... ++.+++.|+.++ .+..||+.+....+........ ......... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEEEeCCC---
Confidence 122333333 446777787664 6888998766333433322111 111222222 667777776543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+..++.... .-.... .+. . ..-.++++. ++.+++.|+.++ .+.+||+.+.+-.
T Consensus 209 ---~i~~~d~~~~-~~~~~~-~~~--~-~~v~~~~~~~~~~~l~~~~~dg---------~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVATL-EGH--M-SNVSFAVFHPTLPIIISGSEDG---------TLKIWNSSTYKVE 263 (814)
T ss_dssp ---EEEEEETTTT-EEEEEE-ECC--S-SCEEEEEECSSSSEEEEEETTS---------CEEEEETTTCSEE
T ss_pred ---EEEEEECCCC-cEEEEE-cCC--C-CCEEEEEEcCCCCEEEEEeCCC---------eEEEEECCCCcEE
Confidence 3444444332 211111 111 1 111122222 456777777533 3888898876543
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=82.33 E-value=50 Score=34.59 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=47.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.++|+.+..-...-... .. . -.++... ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 36 ~v~lWd~~~~~~~~~~~~~--~~-~-v~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVT--ET-P-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp EEEEEETTTTEEEEEEECC--SS-C-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred cEEEEECCCCceeEEeecc--CC-c-EEEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 6778888877543221110 11 1 1122222 3455666664 2468899998753 122221 1 1112
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333444446777787765 5677787654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=81.99 E-value=68 Score=35.58 Aligned_cols=173 Identities=13% Similarity=0.075 Sum_probs=84.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||+.+.+-...-.. .... -.+++.. ++..++.|+.+ ..+.+||+.+.. .+.. +....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~----~~~~---~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG---HTDR-IYSTIYDHERKRCISASMD------TTIRIWDLENGE----LMYT---LQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC---CSSC-EEEEEEETTTTEEEEEETT------SCEEEEETTTTE----EEEE---ECCCS
T ss_pred CeEEEEECCCCcEEEEecC---CCCC-EEEEEEcCCCCEEEEEeCC------CcEEEEECCCCc----EEEE---EeCCC
Confidence 3688899887664332211 1111 1222332 34555666542 469999998752 2221 11122
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
..-..+.+.+ ..++.|+.++ .+..||+.+....+..... ......+...++.+++.|+ ++
T Consensus 353 ~~v~~~~~~~-~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~-dg------ 412 (464)
T 3v7d_B 353 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDYSRKFSYHHT-------NLSAITTFYVSDNILVSGS-EN------ 412 (464)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEECT-------TCCCEEEEEECSSEEEEEE-TT------
T ss_pred CcEEEEEEcC-CEEEEEeCCC-----cEEEEECCCCceeeeecCC-------CCccEEEEEeCCCEEEEec-CC------
Confidence 2233444555 5677777664 5888999876323322111 1223334455777777776 21
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEEC
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~ 370 (998)
.+..++..+. +.....-. +....-.++++.++.+++.++.++ ..-++++|.
T Consensus 413 ~i~iwd~~~g---~~~~~~~~-~~~~~v~~v~~~~~~l~~~~~~~g-------~~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSG---KLVHANIL-KDADQIWSVNFKGKTLVAAVEKDG-------QSFLEILDF 463 (464)
T ss_dssp EEEEEETTTC---CEEESCTT-TTCSEEEEEEEETTEEEEEEEETT-------EEEEEEEEC
T ss_pred eEEEEECCCC---cEEehhhc-cCCCcEEEEEecCCEEEEEEEeCC-------eEEEEEeec
Confidence 3444554433 22222111 122223344455666766665433 233677765
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=81.30 E-value=44 Score=34.93 Aligned_cols=96 Identities=6% Similarity=-0.001 Sum_probs=44.8
Q ss_pred CcEEEEECC-CCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
+.+++||+. +.++..+.... ....-+.++.. ++.+|+.+.. ...+.+|++...+.++..+... +.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~---~~ 82 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD---VPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAES---AL 82 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE---CSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEE---EC
T ss_pred CeEEEEEECCCCcEEEeeeEe---cCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeecccc---cc
Confidence 467778774 45555443321 11112223333 3356665542 1468888877222236555422 11
Q ss_pred CCcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECC
Q 001901 227 PRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 227 ~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
...-..++.-.++ .||+.+..+ ..+..||+.
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 1122334343333 455554322 357778773
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=81.01 E-value=55 Score=33.91 Aligned_cols=104 Identities=10% Similarity=0.021 Sum_probs=54.2
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEe-eecCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV-VVQGPGP 225 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l-~~~g~~P 225 (998)
.+.+++||+.+.++..+...........-++++.. + +.+||.... +.+++||.. . +...+ .......
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g--~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-G--TFEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-S--CEEECCSBCTTSC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-C--CEEEEEeccCCCc
Confidence 34689999988888766431000011122344443 3 588887642 358999987 4 25444 2111101
Q ss_pred CCCcccEEEEECCcEEEEEcCCCC----------CCCcccEEEEECC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDG----------KRPLADVWALDTA 262 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g----------~~~lndv~~yD~~ 262 (998)
....-+.++.-.++.+|+....++ ......+++||+.
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 112233444444557887654321 1113579999986
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=80.86 E-value=42 Score=40.19 Aligned_cols=110 Identities=7% Similarity=-0.024 Sum_probs=50.1
Q ss_pred cEEEEECCC-CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC-C
Q 001901 255 DVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP-S 332 (998)
Q Consensus 255 dv~~yD~~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P-~ 332 (998)
.++.+|+.+ . +-..+.... .........+. .+++.++++..+... ...+++.++..+. ............ .
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~~--~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLGK--EQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCCS--CSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCCC--CcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 788999987 6 333332110 11112223334 566555554432222 3456777766543 322221110000 0
Q ss_pred CcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 333 PRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 333 pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
......+..-++++++.++.++ ...+|.+|.... +..+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 0011112223566666665432 356999997766 55554
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=80.80 E-value=48 Score=35.15 Aligned_cols=152 Identities=9% Similarity=0.049 Sum_probs=74.2
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+.+++.|+. ...+.+||+.+. +|..+..... ....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 20 ~~~l~~~~~------d~~v~i~~~~~~--~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 84 (372)
T 1k8k_C 20 RTQIAICPN------NHEVHIYEKSGN--KWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTDR-----NAYVWTLKGR 84 (372)
T ss_dssp SSEEEEECS------SSEEEEEEEETT--EEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETTS-----CEEEEEEETT
T ss_pred CCEEEEEeC------CCEEEEEeCCCC--cEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCCC-----eEEEEECCCC
Confidence 456666654 256999998875 3544442211 111222333444446777777654 5778888777
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-C
Q 001901 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (998)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~ 343 (998)
++......... ...........++.+++.|+.++. ..+|.+.... .|........ +....-.++++. +
T Consensus 85 --~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~----v~i~d~~~~~--~~~~~~~~~~-~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 85 --TWKPTLVILRI--NRAARCVRWAPNEKKFAVGSGSRV----ISICYFEQEN--DWWVCKHIKK-PIRSTVLSLDWHPN 153 (372)
T ss_dssp --EEEEEEECCCC--SSCEEEEEECTTSSEEEEEETTSS----EEEEEEETTT--TEEEEEEECT-TCCSCEEEEEECTT
T ss_pred --eeeeeEEeecC--CCceeEEEECCCCCEEEEEeCCCE----EEEEEecCCC--cceeeeeeec-ccCCCeeEEEEcCC
Confidence 66554322110 011122223346677777775432 2344444332 2221111111 111122233333 5
Q ss_pred CEEEEEcccCCCCCccccCCeEEEEECC
Q 001901 344 ARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (998)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~vyD~~ 371 (998)
+.+++.|+.+ ..+.+||..
T Consensus 154 ~~~l~~~~~d---------g~i~~~d~~ 172 (372)
T 1k8k_C 154 SVLLAAGSCD---------FKCRIFSAY 172 (372)
T ss_dssp SSEEEEEETT---------SCEEEEECC
T ss_pred CCEEEEEcCC---------CCEEEEEcc
Confidence 6677777753 347888864
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=80.59 E-value=58 Score=33.89 Aligned_cols=180 Identities=13% Similarity=0.117 Sum_probs=83.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||+.+.+-...-.. .... -.++... ++.+++.|+.+ ..+.+||+.+.. .-..+ +...
T Consensus 87 ~~i~vwd~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~-~~~~~------~~~~ 149 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG---HSNY-VFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGK-CLKTL------PAHS 149 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSC-EEEEEECSSSSEEEEEETT------SCEEEEETTTCC-EEEEE------CCCS
T ss_pred CEEEEEECCCCcEEEEEcC---CCCC-EEEEEEcCCCCEEEEEeCC------CcEEEEECCCCE-EEEEe------cCCC
Confidence 4678889887653322111 0111 1112222 34566666642 468999998753 11111 1111
Q ss_pred ccc-EEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 229 YGH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 229 ~~h-s~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
..- ++....++.+++.|+.++ .+..||+.+. +....-..... ..........++..++.|+.++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~----- 214 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDN----- 214 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCSSC---CCEEEEEECTTSSEEEEEETTT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEeccCC---CceEEEEECCCCCEEEEEcCCC-----
Confidence 112 222333446777787665 5788999876 33221111110 1112222334566667776543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCccee--EEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQH--AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~h--sav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.+..|+.... .-.... .+.. ...... .....++.+++.|+.++ .+.+||..+.+
T Consensus 215 -~i~iwd~~~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg---------~i~vwd~~~~~ 270 (312)
T 4ery_A 215 -TLKLWDYSKG-KCLKTY-TGHK-NEKYCIFANFSVTGGKWIVSGSEDN---------LVYIWNLQTKE 270 (312)
T ss_dssp -EEEEEETTTT-EEEEEE-CSSC-CSSSCCCEEEECSSSCEEEECCTTS---------CEEEEETTTCC
T ss_pred -eEEEEECCCC-cEEEEE-EecC-CceEEEEEEEEeCCCcEEEEECCCC---------EEEEEECCCch
Confidence 2344444332 211111 1111 111111 12223567788887543 38889988775
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=80.30 E-value=9.9 Score=46.47 Aligned_cols=196 Identities=10% Similarity=0.116 Sum_probs=91.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.++|+.+.+|..+.... .....-..+.+ + +.+++.|+.+ ..+.+||+.+.. ........+. +
T Consensus 78 ~I~vwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~-~~~~~~~~~~-~- 145 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENG-TTSPIIIDAH-A- 145 (753)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSS-CCCCEEEECC-S-
T ss_pred eEEEEECCCCccccccccc---CCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCC-CcceeEeecC-C-
Confidence 6788999898887665441 11112222222 2 5566667642 468899987652 1111111110 1
Q ss_pred CCcccEEEEEC-------------CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC--
Q 001901 227 PRYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-- 291 (998)
Q Consensus 227 ~R~~hs~~~~~-------------~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-- 291 (998)
..-.++.... ++.+++.|+.++ .+..||+.+....|..+...... .......+...+
T Consensus 146 -~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h--~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 146 -IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVL 217 (753)
T ss_dssp -SCEEEEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCS
T ss_pred -CceEEEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCC--CCcEEEEEeccCCC
Confidence 1111122222 245777777665 46777776553355544332210 011122222334
Q ss_pred -CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEE
Q 001901 292 -GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (998)
Q Consensus 292 -~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD 369 (998)
+.+++.||.++. ..+|.+..... .+........ .....-.++++. ++.+++.||.++ .|.+||
T Consensus 218 ~~~~l~s~s~Dg~----I~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~Dg---------~I~vwd 282 (753)
T 3jro_A 218 LRSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWK 282 (753)
T ss_dssp SSEEEEEEESSSC----EEEEEESSSSS-CCBCCBSSSS-CCSSCCCCEEECTTTCCEEEECSSS---------CEECCB
T ss_pred CCCEEEEEecCCE----EEEecCCCCCC-cceeEEeccC-CCCCceEEEEEcCCCCEEEEEcCCC---------EEEEEe
Confidence 788888886543 23444433211 1110111100 011111223332 567777777543 377788
Q ss_pred CCC-CeEEEcccC
Q 001901 370 TAA-GVWCDTKSV 381 (998)
Q Consensus 370 ~~t-~~W~~v~~~ 381 (998)
..+ ..|......
T Consensus 283 ~~~~~~~~~~~~~ 295 (753)
T 3jro_A 283 ENLEGKWEPAGEV 295 (753)
T ss_dssp CCSSSCCBCCCCB
T ss_pred cCCCCCccccccc
Confidence 774 456554443
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=80.13 E-value=34 Score=41.24 Aligned_cols=132 Identities=15% Similarity=0.173 Sum_probs=73.4
Q ss_pred EEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCC--CCC---CcccEEEEECCcEEEEEcCCCCCCCcc
Q 001901 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG--PGP---RYGHVMALVGQRYLMAIGGNDGKRPLA 254 (998)
Q Consensus 180 a~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~--P~~---R~~hs~~~~~~~~Lyv~GG~~g~~~ln 254 (998)
-++.++.||+... .+.++.+|..+....|+.-...... +.. ....+.++.++ .||+... + .
T Consensus 73 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~v~v~~~-d-----g 138 (677)
T 1kb0_A 73 PVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG-KVYVGAW-D-----G 138 (677)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT-EEEEECT-T-----S
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECC-EEEEEcC-C-----C
Confidence 4567889998865 2579999999876679875421100 000 11223444555 6777532 2 4
Q ss_pred cEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC-CeEEEEECC
Q 001901 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAIAP 327 (998)
Q Consensus 255 dv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~-~~W~w~~~~ 327 (998)
.++.+|..+....|+.-..... +.......+.++.++++|+..+..... ....++.|+..+. -.|++....
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~~p~v~~~~v~v~~~~~~~~-~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQ-KGSLTITGAPRVFKGKVIIGNGGAEYG-VRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTC-CSSCBCCSCCEEETTEEEECCBCTTTC-CBCEEEEEETTTCCEEEEEESSC
T ss_pred EEEEEECCCCCEEeeecCCcCc-CcCcccccCcEEECCEEEEEecccccC-CCCEEEEEECCCCcEEEEeccCC
Confidence 6999999998888987543110 111112223345688887754322211 2345777776533 246665443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 998 | ||||
| d1jk7a_ | 294 | d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human | 1e-105 | |
| d3c5wc1 | 288 | d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt | 3e-98 | |
| d1auia_ | 473 | d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc | 2e-94 | |
| d1s95a_ | 324 | d.159.1.3 (A:) Serine/threonine protein phosphatas | 7e-89 | |
| d1g5ba_ | 219 | d.159.1.3 (A:) lambda ser/thr protein phosphatase | 5e-14 | |
| d1nnwa_ | 251 | d.159.1.5 (A:) Hypothetical protein PF1291 {Archae | 5e-13 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 6e-11 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 2e-05 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 1e-04 | |
| d1su1a_ | 184 | d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia | 3e-08 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 3e-04 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Score = 326 bits (838), Expect = e-105
Identities = 140/313 (44%), Positives = 194/313 (61%), Gaps = 20/313 (6%)
Query: 641 QMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPI 700
+++I+S+ I LL+ RG KP + L NEI LC + IF S+P +L+L+AP+
Sbjct: 1 KLNIDSI----IQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPL 54
Query: 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE 760
KI GD+HGQ+ DL+RLF+ G P +YLFLGDYVDRG+ SLETI LLLA K++
Sbjct: 55 KICGDIHGQYYDLLRLFEYGGFPPE------SNYLFLGDYVDRGKQSLETICLLLAYKIK 108
Query: 761 YPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKI 820
YP N L+RGNHE A IN ++GF EC R + W FN LP+AA++++KI
Sbjct: 109 YPENFFLLRGNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKI 164
Query: 821 ICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880
C HGG+ + +EQI + RP + + L DLLWSDP ++ V G N RG
Sbjct: 165 FCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVS-F 220
Query: 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL 940
TFG + V +F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ +
Sbjct: 221 TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSV 280
Query: 941 GRDLVVVPKLIHP 953
L+ +++ P
Sbjct: 281 DETLMCSFQILKP 293
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 308 bits (791), Expect = 3e-98
Identities = 109/285 (38%), Positives = 161/285 (56%), Gaps = 14/285 (4%)
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIA 730
L +++ LC+ A+ I + E +V +++ P+ + GD+HGQF DLM LF G
Sbjct: 18 LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT---- 73
Query: 731 YIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIER 790
+YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGNHE+ I ++GF EC+ +
Sbjct: 74 --NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRK 131
Query: 791 MGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850
G + W LF++LPL AL++ +I C+HGG+ SI+ ++ I L R +
Sbjct: 132 YGNAN---VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPH-E 187
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
+ DLLWSDP + G + RG G TFG D F + N L L+ RAH+ VM+G+
Sbjct: 188 GPMCDLLWSDPDDRG---GWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGY 243
Query: 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955
+++T+FSA NYC N AI+ L L P P
Sbjct: 244 NWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Score = 305 bits (783), Expect = 2e-94
Identities = 103/318 (32%), Positives = 153/318 (48%), Gaps = 31/318 (9%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 33 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 92
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 93 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 146
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 147 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 202
Query: 841 QRPITMEAGSIVLMDLLWSDPTENDSVEGLR-----PNARGPGLVTFGPDRVMEFCNNND 895
R A + D+LWSDP E+ E + RG + V EF +N+
Sbjct: 203 DRFKEPPAYGP-MCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHNN 260
Query: 896 LQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL----- 944
L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 261 LLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQ 320
Query: 945 ---VVVPKLIHPLPPAIS 959
P + +
Sbjct: 321 FNCSPHPYWLPNFMDVFT 338
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 285 bits (730), Expect = 7e-89
Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 20/291 (6%)
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSPSTA 726
L + + + S ++++ I + GD HGQF DL+ +F+ G PS
Sbjct: 29 LHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSET 88
Query: 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIE 786
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E
Sbjct: 89 NP-----YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGE 143
Query: 787 CIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG-IGRSINHVEQIENLQRPIT 845
+ + + +F WLPLA I K++ MHGG ++ I ++R
Sbjct: 144 VKAKYTA----QMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQ 199
Query: 846 MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905
S + DLLWSDP + G + RG FGPD F N+L I+R+HE
Sbjct: 200 PPD-SGPMCDLLWSDPQPQN---GRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEV 254
Query: 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLP 955
+G+E G +T+FSA NYC N + + L G DL +P
Sbjct: 255 KAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVP 305
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Score = 70.3 bits (171), Expect = 5e-14
Identities = 41/213 (19%), Positives = 71/213 (33%), Gaps = 39/213 (18%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + GDLHG + +LM D G + + +GD VDRG ++E + L
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLEL------ 63
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH----------RINRLFNW 809
+RGNHE I+ L + G W ++ + +
Sbjct: 64 ITFPWFRAVRGNHEQMMIDGLSERG--NVNHWLLNGGGWFFNLDYDKEILAKALAHKADE 121
Query: 810 LPLA---ALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS 866
LPL +KK + H + + Q+ +W+ ++S
Sbjct: 122 LPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQV-------------IWNRERISNS 168
Query: 867 VEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
G+ +G FG ++ + I
Sbjct: 169 QNGIVKEIKGADTFIFGHTPAVKPLKFANQMYI 201
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 67.8 bits (164), Expect = 5e-13
Identities = 18/139 (12%), Positives = 35/139 (25%), Gaps = 7/139 (5%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
+ + ++ G L Y LG+ V + E I ++ L
Sbjct: 2 YVAVLANIAGNLPALTAALSRIEE-MREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT 60
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG----IWAWHRINRLFNWLPLAA 814
NV +IRG ++ + E G +
Sbjct: 61 --KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLR 118
Query: 815 LIEKKIICMHGGIGRSINH 833
+ ++ GG +
Sbjct: 119 DLPIYLVDKIGGNEVFGVY 137
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (149), Expect = 6e-11
Identities = 44/293 (15%), Positives = 60/293 (20%), Gaps = 66/293 (22%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
+ + + Y+ W R+ PR+ VG ++ GG + D L
Sbjct: 16 QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSAL 72
Query: 207 DLTQQRPRWHRVV--------------------------------------------VQG 222
D
Sbjct: 73 DCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV 132
Query: 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282
R V V R L A+GG DG L +
Sbjct: 133 APMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT------AMNTIR 186
Query: 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342
+ GG D + D E R
Sbjct: 187 SGAGVCVLHNCIYAAGGYDGQDQ-----LNSVERYDVETETWTFVAPMKHRRSALGITVH 241
Query: 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAA 395
R++V LGG SV D W S VT +GR A
Sbjct: 242 QGRIYV----LGGYDGHTFLDSVECYDPDTDTW----SEVTRMTSGRSGVGVA 286
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (104), Expect = 2e-05
Identities = 40/275 (14%), Positives = 63/275 (22%), Gaps = 37/275 (13%)
Query: 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242
VG ++ GG LS L + + W R+ PR G +VG L
Sbjct: 3 VGRLIYTAGGYFRQSLS--YLEAYNPSNGT--WLRL---ADLQVPRSGLAGCVVGGL-LY 54
Query: 243 AIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302
A+GG + + P + P +
Sbjct: 55 AVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC- 113
Query: 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG--RMVE 360
+ + + + + R +N L+ GG G E
Sbjct: 114 ------IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAE 167
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVEL----------------- 403
+S A G D +L
Sbjct: 168 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 227
Query: 404 ---TRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLV 435
RR I++ GG G LD +
Sbjct: 228 PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVEC 262
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 12/132 (9%)
Query: 142 GIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAE 201
G CY N+W IT + + V+ I AG
Sbjct: 156 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAG---------VCVLHNCIYAAGGYDG 206
Query: 202 DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261
+ + + P R + + R + +GG DG L V D
Sbjct: 207 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGR-IYVLGGYDGHTFLDSVECYDP 265
Query: 262 AAKPYEWRKLEP 273
W ++
Sbjct: 266 DTD--TWSEVTR 275
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Score = 52.3 bits (124), Expect = 3e-08
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 16/156 (10%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITL----LL 755
+ D+HG R+ + + + LGD ++ G + ++
Sbjct: 4 LMFASDIHGSLPATERVLELFAQSG------AQWLVILGDVLNHGPRNALPEGYAPAKVV 57
Query: 756 ALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAAL 815
E + V +RGN ++ L F I + + + LF L AL
Sbjct: 58 ERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPAL 117
Query: 816 IEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSI 851
+ ++ H+ E GS+
Sbjct: 118 NQNDVLVYGHT------HLPVAEQRGEIFHFNPGSV 147
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 42.1 bits (97), Expect = 3e-04
Identities = 43/318 (13%), Positives = 73/318 (22%), Gaps = 33/318 (10%)
Query: 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTP 174
R++++ N A G+P G +D T S T
Sbjct: 32 RVLMWSS----YRNDAFGGSP-----------GGITLTSSWDPSTGIVSDRTVTVTKHDM 76
Query: 175 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234
++ +V+ GG S D Q
Sbjct: 77 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTI 136
Query: 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294
+ + P + W AK + +G +A G +
Sbjct: 137 GGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY-RSDNHAWLFGWKKGSV 195
Query: 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 354
G A + S G + + G S R V A+
Sbjct: 196 FQAGPSTAMNWYYTS---------GSGDV-KSAGKRQSNRGVAPDAMCGN--AVMYDAVK 243
Query: 355 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414
G + T + + + S + + R +
Sbjct: 244 GKILT-----FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP 298
Query: 415 GDLIFIYGGLRGGVLLDD 432
FI GG R G+ +D
Sbjct: 299 DGSTFITGGQRRGIPFED 316
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 998 | |||
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 100.0 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 100.0 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 100.0 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.95 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.81 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 99.78 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.53 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.07 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.64 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.6 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.29 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 98.21 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.11 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.09 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 96.93 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 96.71 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 96.4 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 95.46 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 94.67 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 93.99 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 92.19 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 91.92 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 87.43 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 83.54 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 82.79 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 82.22 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 82.18 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 81.28 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 80.3 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=100.00 E-value=8e-76 Score=636.79 Aligned_cols=291 Identities=47% Similarity=0.842 Sum_probs=275.5
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
+|++|++|++.+.+++.. ...|+++||.+||++|+++|++||+++++++|++|||||||||.||+++|+..|+|+..
T Consensus 4 id~~i~~l~~~~~~~~~~--~~~l~~~~i~~l~~~a~~i~~~e~~ll~i~~pv~VvGDiHG~~~DL~~if~~~g~p~~~- 80 (294)
T d1jk7a_ 4 IDSIIQRLLEVRGSKPGK--NVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 80 (294)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTSS-
T ss_pred HHHHHHHHHhccCCCCCc--ccCCCHHHHHHHHHHHHHHHHhCCCEEEecCCeEEEEECCCChHhHHHHHhhcCCCccc-
Confidence 688999999876555432 44689999999999999999999999999999999999999999999999999999876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+. .+|+.++++|
T Consensus 81 -----~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~y~~----~i~~~~~~~F 151 (294)
T d1jk7a_ 81 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 151 (294)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHTTSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccccccccccchhHHHhhcCH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999964 5999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+||+|++++|||||||+|.+.++++|+.+.||.+.+..+ ++.|+|||||.+ ...+|.+|.||.| +.||++++
T Consensus 152 ~~LPlaalI~~~i~cvHGGi~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~RG~g-~~fg~~~~ 227 (294)
T d1jk7a_ 152 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVLGWGENDRGVS-FTFGAEVV 227 (294)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCHHHHHTCCSSCCCCSSS-HHHHHHHCEECS--SCSSEEECTTSSS-EEECHHHH
T ss_pred hhCceeeEEcCeEEEecCcccCCccchhhhhhccCCCCCCCcc-hhhhhhhcCCcc--ccCCCCCCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887655 899999999986 4578999999999 78999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (998)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.+++++.++++.|+|.
T Consensus 228 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~viTiFSa~nY~~~~~N~gail~i~~~~~~~~~~~~p~ 294 (294)
T d1jk7a_ 228 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (294)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTGGGTCCCCEEEEEECTTSCEEEEEECCC
T ss_pred HHHHHHCCCCEEEEcCccccCCcEEecCCcEEEEecCCCcCCCCCccEEEEEECCCCcEeEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999984
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-73 Score=619.21 Aligned_cols=284 Identities=39% Similarity=0.738 Sum_probs=271.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
+|++|+.+.+.+ .|++++|.+||++|+++|++||+++++++|++|||||||||+||+++|+..|.++..
T Consensus 5 ~d~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~e~~l~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~- 73 (288)
T d3c5wc1 5 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 73 (288)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEEeCCCeEEEeeCCCCHHHHHHHHHhcCCCccc-
Confidence 688999997753 488999999999999999999999999999999999999999999999999998876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||++||.++||.. .+|..++++|
T Consensus 74 -----~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~~~~~~gF~~E~~~ky~~~---~i~~~~~~~F 145 (288)
T d3c5wc1 74 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 145 (288)
T ss_dssp -----CEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHHSSS---HHHHHHHHHH
T ss_pred -----eEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCcccccccccCcchhhhhhcCcH---HHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999864 6999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+||+|+++||||||||++.+.++++|+.+.||.+.++.. +++|+|||||.. ..+|.+|.||.| +.||++++
T Consensus 146 ~~LPlaaiI~~~i~cvHGGi~~~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~rg~g-~~fg~~~~ 220 (288)
T d3c5wc1 146 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDIS 220 (288)
T ss_dssp TTSCSEEEETTTEEEESSCCCTTCSSHHHHHHSCCSSSCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHHH
T ss_pred hhccceEEecCeEEEecccccCCccchhhHhhcccccCCCccc-cccccccCCccc---CCCCccCCCCCe-eecCHHHH
Confidence 9999999999999999999999999999999999999887654 899999999975 478999999999 68999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~ 955 (998)
++||++||+++||||||++++||++.+++||||||||||||+..+|.||+|+|++++++++..|+|.|
T Consensus 221 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~kviTiFSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~p~p 288 (288)
T d3c5wc1 221 ETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288 (288)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEEGGGTEEEEBCCTTGGGTSCCCEEEEEECTTCCEEEEEECCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCCCCeecCCCcEEEEecCCCccCCCCcceEEEEECCCCcEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999976
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-72 Score=611.13 Aligned_cols=296 Identities=32% Similarity=0.574 Sum_probs=271.8
Q ss_pred ChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCeEEEecCCCCHHHHHHHHHHc
Q 001901 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEY 720 (998)
Q Consensus 645 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~----~~i~vvGDiHG~~~dL~~il~~~ 720 (998)
.++++.+|+.+...+ .|+.+++.+||++|+++|++||+++++. +||+|||||||||.||+++|+..
T Consensus 13 ~~~~~~li~~~~~~~----------~l~~~~~~~ll~~~~~il~~e~~l~~i~~~~~~pv~VvGDiHGq~~DL~~if~~~ 82 (324)
T d1s95a_ 13 ISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELN 82 (324)
T ss_dssp HHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeecCCCCCEEEEEECCCCHHHHHHHHHHC
Confidence 356888888886642 5789999999999999999999999984 69999999999999999999999
Q ss_pred CCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhh
Q 001901 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAW 800 (998)
Q Consensus 721 g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~ 800 (998)
|+|+... +|||||||||||++|+||+.+|++||++||++|++||||||+..++..|||++||..+|+. .+|
T Consensus 83 g~p~~~~-----~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~~~n~~ygF~~e~~~k~~~----~l~ 153 (324)
T d1s95a_ 83 GLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMY 153 (324)
T ss_dssp CCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCH----HHH
T ss_pred CCCCCCC-----eEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCccccccccccccchHhhhhcCH----HHH
Confidence 9998652 6999999999999999999999999999999999999999999999999999999999965 599
Q ss_pred hhhhhhhcccceeEEEcCeEEEecCCcc-CcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCc
Q 001901 801 HRINRLFNWLPLAALIEKKIICMHGGIG-RSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGL 879 (998)
Q Consensus 801 ~~~~~~f~~LP~aa~i~~~il~vHgGi~-~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~ 879 (998)
+.++++|++||+||+|++++|||||||+ +.+.++++|+++.||.+.++.. +++|+|||||.+. .+|.++.||.|
T Consensus 154 ~~~~~~F~~LPlaa~I~~~ilcvHGGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dlLWSDP~~~---~~~~~~~Rg~g- 228 (324)
T d1s95a_ 154 ELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQ---NGRSISKRGVS- 228 (324)
T ss_dssp HHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSSCCSSS-HHHHHHHCEECSS---SSEEECTTSSS-
T ss_pred HHHHHHHhhcchhhhccCcEEEecCCcCccccCCHHHHHhccCCCCCcchh-hhhhhhccCcccc---CCcCcCCCCCc-
Confidence 9999999999999999999999999997 5688999999999999887655 8999999999863 67899999999
Q ss_pred eeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEc-CCceEEeEEeccCCCCC
Q 001901 880 VTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAI 958 (998)
Q Consensus 880 ~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~~ 958 (998)
+.||++++++||++||+++||||||++++||+++++++|||||||+||||..+|+||+|.|+ +++.+.++.|.|+|...
T Consensus 229 ~~FG~~~~~~Fl~~n~l~lIIR~He~v~~G~~~~~~~kviTvFSa~nY~~~~~N~~a~l~i~~~~~~~~~~~f~~~p~p~ 308 (324)
T d1s95a_ 229 CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 308 (324)
T ss_dssp EEECHHHHHHHHHHHTCCEEEECCSCCTTSEEEEGGGTEEEECCCSSGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred CCcCHHHHHHHHHHcCCcEEEEcCccccCceEEecCCcEEEEeCCCccCCCCCcceEEEEEECCCceeEEEEecCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999996 56889999999988766
Q ss_pred CCCCCC
Q 001901 959 SSPETS 964 (998)
Q Consensus 959 ~~~~~~ 964 (998)
.-|..+
T Consensus 309 ~~p~~~ 314 (324)
T d1s95a_ 309 VKPMAY 314 (324)
T ss_dssp CCTTTT
T ss_pred CChhhh
Confidence 444433
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-70 Score=618.10 Aligned_cols=292 Identities=37% Similarity=0.620 Sum_probs=267.9
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++.+.+++++.. .|+++++++||++|++||++||+|+++.+|++|||||||||.||++||+..|.|+..
T Consensus 30 ~~~l~~hf~~eg----------rl~~~~~l~li~~a~~il~~Epnll~i~~Pv~VvGDIHGq~~DLl~If~~~G~P~~~- 98 (473)
T d1auia_ 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (473)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCCCCHHHHHHHHHHcCCCCcc-
Confidence 466777777643 588999999999999999999999999999999999999999999999999999876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+|||.+|++||++||++|++||||||++.++..|||+.||..+|++ .+|+.++++|
T Consensus 99 -----~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~~~n~~ygF~~E~~~ky~~----~iy~~~~~~F 169 (473)
T d1auia_ 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 169 (473)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccHhhhcccccHHHHHHhhcH----HHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999999975 5999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCccc-CCCCCCceee
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~----~~~~~~-n~rg~~~~~f 882 (998)
++||+||+|+++||||||||+|.+.++++|+.+.||.+++..+ +++|||||||.+... ..+|.+ +.||.| +.|
T Consensus 170 ~~LPLAAiI~~kifcVHGGIsp~l~~l~dI~~I~R~~e~p~~~-~~~DLLWSDP~~~~~~~~~~~~~~~ns~RG~g-~~F 247 (473)
T d1auia_ 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (473)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred ccchhhhhhcCcEEEeeccCCCccCchhhhhhcccccCCCCcC-ceeeeeccCCcccccccccccccccCCCCCCE-EEE
Confidence 9999999999999999999999999999999999999988765 899999999986421 123343 579999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCCe------EEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~------~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (998)
|.+++++||++||+++||||||++++||+++++++ |||||||||||+.++|+||||+++++ .+.++.|.+.+.
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~Gy~~~~~~~~~~~~~viTVFSApnYc~~~nN~aavl~~~~~-~~~i~qf~~~~h 326 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 326 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchhhhhhhhcCCccCCCCCEEEEcCCCCcCCCcCCeeEEEeecCC-CcceEEecCCCC
Confidence 99999999999999999999999999999999987 99999999999999999999999876 588899988877
Q ss_pred CCCCCC
Q 001901 957 AISSPE 962 (998)
Q Consensus 957 ~~~~~~ 962 (998)
.+..|.
T Consensus 327 p~~~p~ 332 (473)
T d1auia_ 327 PYWLPN 332 (473)
T ss_dssp CCCCGG
T ss_pred cccccc
Confidence 765544
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-32 Score=299.41 Aligned_cols=263 Identities=20% Similarity=0.329 Sum_probs=224.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
|+.||||||.... .++++++||+.+++|++++.+ |.||.+|++++++++|||+||
T Consensus 4 g~~iyv~GG~~~~----------------------~~~~~~~yd~~t~~W~~~~~~---p~~R~~~~~~~~~~~iyv~GG 58 (288)
T d1zgka1 4 GRLIYTAGGYFRQ----------------------SLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGG 58 (288)
T ss_dssp CCCEEEECCBSSS----------------------BCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEECCcCCC----------------------CCceEEEEECCCCeEEECCCC---CCccceeEEEEECCEEEEEeC
Confidence 6899999997531 678999999999999999766 899999999999999999999
Q ss_pred CCCC---CCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEE
Q 001901 193 IGPA---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269 (998)
Q Consensus 193 ~~~~---~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~ 269 (998)
.... ....+++|+||+.++ +|..+. ++|.+|++|+++++++ +||++||.++...++++++||+.+. +|.
T Consensus 59 ~~~~~~~~~~~~~~~~yd~~~~--~w~~~~---~~p~~r~~~~~~~~~~-~i~~~gg~~~~~~~~~~~~~~~~~~--~~~ 130 (288)
T d1zgka1 59 RNNSPDGNTDSSALDCYNPMTN--QWSPCA---PMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERD--EWH 130 (288)
T ss_dssp EEEETTEEEECCCEEEEETTTT--EEEECC---CCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTT--EEE
T ss_pred cccCCCCccccchhhhcccccc--cccccc---cccceecceeccccce-eeEEecceecccccceeeeeccccC--ccc
Confidence 6422 345689999999987 499987 8999999999999988 8999999999889999999999999 998
Q ss_pred EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEE
Q 001901 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349 (998)
Q Consensus 270 ~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~ 349 (998)
...... .+|..|. +++..++++++||.+... ...+++.|++..+ +|...... +.++..|+++.++++++++
T Consensus 131 ~~~~~~---~~r~~~~-~~~~~~~~~~~GG~~~~~-~~~~~~~~d~~~~---~~~~~~~~-~~~~~~~~~~~~~~~i~i~ 201 (288)
T d1zgka1 131 LVAPML---TRRIGVG-VAVLNRLLYAVGGFDGTN-RLNSAECYYPERN---EWRMITAM-NTIRSGAGVCVLHNCIYAA 201 (288)
T ss_dssp ECCCCS---SCCBSCE-EEEETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEE
T ss_pred cccccc---cccccce-eeeeeecceEecCccccc-ccceEEEeecccc---cccccccc-ccccccccccceeeeEEEe
Confidence 876553 3455554 455699999999987655 5788999998866 66666554 5788999999999999999
Q ss_pred cccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCC
Q 001901 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVL 429 (998)
Q Consensus 350 GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~ 429 (998)
||.+... ..++++.||..+.+|+.+... |.+|..|++++++++||||||.++...
T Consensus 202 GG~~~~~----~~~~~~~~~~~~~~~~~~~~~---------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~ 256 (288)
T d1zgka1 202 GGYDGQD----QLNSVERYDVETETWTFVAPM---------------------KHRRSALGITVHQGRIYVLGGYDGHTF 256 (288)
T ss_dssp CCBCSSS----BCCCEEEEETTTTEEEECCCC---------------------SSCCBSCEEEEETTEEEEECCBCSSCB
T ss_pred cCccccc----cccceeeeeecceeeecccCc---------------------cCcccceEEEEECCEEEEEecCCCCee
Confidence 9987654 378899999999999998766 669999999999999999999999999
Q ss_pred cccEEEecccccc
Q 001901 430 LDDLLVAEDLAAA 442 (998)
Q Consensus 430 l~Dv~~ld~~~~~ 442 (998)
++++|++|...-.
T Consensus 257 ~~~v~~yd~~~~~ 269 (288)
T d1zgka1 257 LDSVECYDPDTDT 269 (288)
T ss_dssp CCEEEEEETTTTE
T ss_pred cceEEEEECCCCE
Confidence 9999999976533
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-31 Score=287.04 Aligned_cols=257 Identities=21% Similarity=0.341 Sum_probs=216.7
Q ss_pred ecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 82 ~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
+....+.|.||++|+++++ +++||||||........ ..++++|+||+.+++
T Consensus 31 W~~~~~~p~~R~~~~~~~~------------~~~iyv~GG~~~~~~~~-----------------~~~~~~~~yd~~~~~ 81 (288)
T d1zgka1 31 WLRLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDGN-----------------TDSSALDCYNPMTNQ 81 (288)
T ss_dssp EEECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTEE-----------------EECCCEEEEETTTTE
T ss_pred EEECCCCCCccceeEEEEE------------CCEEEEEeCcccCCCCc-----------------cccchhhhccccccc
Confidence 3445678999999999998 78999999975322110 167899999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|+.++++ |.+|++|+++++++++|++||... ....++++.||+.+. .|.... .++.+|++|+++.+.+ .+
T Consensus 82 w~~~~~~---p~~r~~~~~~~~~~~i~~~gg~~~-~~~~~~~~~~~~~~~--~~~~~~---~~~~~r~~~~~~~~~~-~~ 151 (288)
T d1zgka1 82 WSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEPERD--EWHLVA---PMLTRRIGVGVAVLNR-LL 151 (288)
T ss_dssp EEECCCC---SSCCBTCEEEEETTEEEEECCEET-TEECCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EE
T ss_pred ccccccc---cceecceeccccceeeEEecceec-ccccceeeeeccccC--cccccc---ccccccccceeeeeee-cc
Confidence 9999876 899999999999999999999753 446788999999987 598876 7889999999999987 89
Q ss_pred EEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeE
Q 001901 242 MAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRW 321 (998)
Q Consensus 242 yv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W 321 (998)
|++||.+....+++++.||+.+. +|........ .+.++++...+++|+++||.+... .+++.+.|+...+
T Consensus 152 ~~~GG~~~~~~~~~~~~~d~~~~--~~~~~~~~~~----~~~~~~~~~~~~~i~i~GG~~~~~-~~~~~~~~~~~~~--- 221 (288)
T d1zgka1 152 YAVGGFDGTNRLNSAECYYPERN--EWRMITAMNT----IRSGAGVCVLHNCIYAAGGYDGQD-QLNSVERYDVETE--- 221 (288)
T ss_dssp EEECCBCSSCBCCCEEEEETTTT--EEEECCCCSS----CCBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTT---
T ss_pred eEecCcccccccceEEEeecccc--cccccccccc----ccccccccceeeeEEEecCccccc-cccceeeeeecce---
Confidence 99999988888999999999998 9998865543 234455666699999999987765 6789999998877
Q ss_pred EEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCcc
Q 001901 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAV 401 (998)
Q Consensus 322 ~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~ 401 (998)
+|...+.. |.+|..|++++++++|||+||.+... ..+++|+||+++++|+.+..+
T Consensus 222 ~~~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~-------------------- 276 (288)
T d1zgka1 222 TWTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM-------------------- 276 (288)
T ss_dssp EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC--------------------
T ss_pred eeecccCc-cCcccceEEEEECCEEEEEecCCCCe----ecceEEEEECCCCEEEECCCC--------------------
Confidence 66676654 78999999999999999999986643 378999999999999999988
Q ss_pred CCCCcceeEEEE
Q 001901 402 ELTRRCRHAAAA 413 (998)
Q Consensus 402 ~p~~R~~hsa~~ 413 (998)
|.+|++|++++
T Consensus 277 -p~~R~~~~~~~ 287 (288)
T d1zgka1 277 -TSGRSGVGVAV 287 (288)
T ss_dssp -SSCCBSCEEEE
T ss_pred -CCCcEeEEEEE
Confidence 77999999876
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.95 E-value=1.7e-26 Score=260.56 Aligned_cols=276 Identities=16% Similarity=0.134 Sum_probs=197.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEe
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQG 191 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfG 191 (998)
++|||||||......... .+.+..+++||+.+++|+.+..+. .|..+.+++++++ +++||++|
T Consensus 30 ~gkv~v~GG~~~~~~~~~---------------~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~~g~i~v~G 93 (387)
T d1k3ia3 30 SGRVLMWSSYRNDAFGGS---------------PGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDGNGQIVVTG 93 (387)
T ss_dssp TTEEEEEEECCCTTTCSC---------------CCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECTTSCEEEEC
T ss_pred CCEEEEEEeecCcccCCC---------------CCceeEEEEEECCCCcEeecCCCC-CCcccceeEEEEecCCcEEEee
Confidence 789999999865432110 014456889999999999876652 2444555666655 45999999
Q ss_pred CCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCC-CCCcccEEEEECCCCCceEEE
Q 001901 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRK 270 (998)
Q Consensus 192 G~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g-~~~lndv~~yD~~s~~~~W~~ 270 (998)
|.+ .+++++||+.++ +|+... .+|.+|+.|+++++.++++|++||... ...++++++||+.++ +|+.
T Consensus 94 g~~-----~~~~~~yd~~~~--~w~~~~---~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~ 161 (387)
T d1k3ia3 94 GND-----AKKTSLYDSSSD--SWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK--TWTS 161 (387)
T ss_dssp SSS-----TTCEEEEEGGGT--EEEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT--EEEE
T ss_pred cCC-----CcceeEecCccC--cccccc---cccccccccceeeecCCceeeeccccccccccceeeeecCCCC--ceee
Confidence 864 367999999997 499876 899999999999998879999999754 556899999999999 9998
Q ss_pred cccCCCCC-----------------------------------------------------------CCccceEEEEE--
Q 001901 271 LEPEGEGP-----------------------------------------------------------PPCMYATASAR-- 289 (998)
Q Consensus 271 v~~~~~~P-----------------------------------------------------------~~r~~~~a~~~-- 289 (998)
+......+ +..+.++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (387)
T d1k3ia3 162 LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA 241 (387)
T ss_dssp ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET
T ss_pred cCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeec
Confidence 75432210 00111122222
Q ss_pred eCCEEEEEeccCCCCCC----cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCc--cccC
Q 001901 290 SDGLLLLCGGRDASSVP----LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRM--VEDS 362 (998)
Q Consensus 290 ~~~~lyvfGG~~~~~~~----~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~--~~~~ 362 (998)
.++++|+|||....... ...+..+.......|.|.....+ |.+|..|+++++ +++|||+||....... ....
T Consensus 242 ~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 242 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred cCCceEEEEeccCCCCCcccceeecccccccccCCCceeecccc-ccccccceeeeccCCeEEEECCcccCccCCCCcEe
Confidence 46899999997543311 12233333344446678777765 788999988887 6799999998643211 1335
Q ss_pred CeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCC-CCC--CCcccEEEec
Q 001901 363 SSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGL-RGG--VLLDDLLVAE 437 (998)
Q Consensus 363 ~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyVfGG~-~~~--~~l~Dv~~ld 437 (998)
..+++||+++++|+.+..+ +.+|++|+++++ +++|||+||. .++ ....++++++
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~---------------------~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~ 379 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFT 379 (387)
T ss_dssp CCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEE
T ss_pred ceEEEEECCCCeEEECCCC---------------------CCcccceEEEEECCCCEEEEEeCCCcCCCCcccceEEEEc
Confidence 6799999999999999877 679999998877 7899999994 332 3567788887
Q ss_pred c
Q 001901 438 D 438 (998)
Q Consensus 438 ~ 438 (998)
-
T Consensus 380 P 380 (387)
T d1k3ia3 380 P 380 (387)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.81 E-value=1.1e-18 Score=195.97 Aligned_cols=235 Identities=14% Similarity=0.216 Sum_probs=163.1
Q ss_pred CCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecC
Q 001901 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (998)
Q Consensus 88 ~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~ 167 (998)
.|..++.|+.+.+. +++||++||.. .+++++||+.+++|+.+..
T Consensus 72 ~~~~~~~~~~~~~~-----------~g~i~v~Gg~~-------------------------~~~~~~yd~~~~~w~~~~~ 115 (387)
T d1k3ia3 72 TKHDMFCPGISMDG-----------NGQIVVTGGND-------------------------AKKTSLYDSSSDSWIPGPD 115 (387)
T ss_dssp CSCCCSSCEEEECT-----------TSCEEEECSSS-------------------------TTCEEEEEGGGTEEEECCC
T ss_pred CCcccceeEEEEec-----------CCcEEEeecCC-------------------------CcceeEecCccCccccccc
Confidence 34445556666553 67899999863 2467899999999999877
Q ss_pred CCCCCCCccceEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC-----------------------
Q 001901 168 FGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP----------------------- 223 (998)
Q Consensus 168 ~g~~P~pR~~hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~----------------------- 223 (998)
+ |.+|.+|+++++. +++|++||....+...+++++||+.++ +|..++....
T Consensus 116 ~---~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (387)
T d1k3ia3 116 M---QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW 190 (387)
T ss_dssp C---SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC
T ss_pred c---cccccccceeeecCCceeeeccccccccccceeeeecCCCC--ceeecCCCcccccccccccceeeccceeEEEEe
Confidence 6 8999999999985 599999998877778899999999987 4987652110
Q ss_pred -------------------------------------CCCCCcccEEEEE-CCcEEEEEcCCCCCCC---cccEEEEECC
Q 001901 224 -------------------------------------GPGPRYGHVMALV-GQRYLMAIGGNDGKRP---LADVWALDTA 262 (998)
Q Consensus 224 -------------------------------------~P~~R~~hs~~~~-~~~~Lyv~GG~~g~~~---lndv~~yD~~ 262 (998)
.+..++++++... .++++|++||...... ......++..
T Consensus 191 ~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~ 270 (387)
T d1k3ia3 191 KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLG 270 (387)
T ss_dssp GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECC
T ss_pred CCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeeccccc
Confidence 1112222222221 2347999999754221 2223333322
Q ss_pred ---CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC-----CCCCcccEEEEecCCCCeEEEEECCCCCCCCc
Q 001901 263 ---AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA-----SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR 334 (998)
Q Consensus 263 ---s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~-----~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR 334 (998)
.....|..+..+ |.+|..|++++..+++|||+||... ....+..++.|++..+ +|..++.+ |.+|
T Consensus 271 ~~~~~~~~~~~~~~~---p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~---~W~~~~~~-~~~R 343 (387)
T d1k3ia3 271 EPGTSPNTVFASNGL---YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPN-SIVR 343 (387)
T ss_dssp STTSCCEEEECTTCC---SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCC-SSCC
T ss_pred ccccCCCceeecccc---ccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCC---eEEECCCC-CCcc
Confidence 222266665554 5668888888888999999999753 2234567889999877 66677655 7899
Q ss_pred ceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECC
Q 001901 335 YQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (998)
Q Consensus 335 ~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~ 371 (998)
..|+++++ +++|||+||....+.. ....++++|||-
T Consensus 344 ~~Hs~a~l~~dG~v~v~GG~~~~~~~-~~~~~~e~y~Pp 381 (387)
T d1k3ia3 344 VYHSISLLLPDGRVFNGGGGLCGDCT-TNHFDAQIFTPN 381 (387)
T ss_dssp CTTEEEEECTTSCEEEEECCCCTTCS-CCCCEEEEEECG
T ss_pred cceEEEEECCCCEEEEEeCCCcCCCC-cccceEEEEcch
Confidence 99998777 8899999996433321 236789999973
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=99.78 E-value=7.7e-21 Score=198.48 Aligned_cols=122 Identities=27% Similarity=0.332 Sum_probs=92.5
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+|+||||||||+++|+++|+++++++..+ ++||||||||||++|.|||.+|.. .++++|+||||.+++
T Consensus 13 ~rI~vIgDIHG~~~~L~~lL~~i~~~~~~d-----~lv~lGD~vDrGp~s~~vl~~l~~------~~~~~i~GNHE~~ll 81 (219)
T d1g5ba_ 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (219)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred CeEEEEEecccCHHHHHHHHHHcCCCCCCC-----EEEEeCCccccCccHHHHHHHhhc------cccccccCcHHHHHH
Confidence 489999999999999999999999865432 899999999999999999988754 589999999999998
Q ss_pred hhhcCChH-HHHHHhCCC-------cchhhhhhhhhhhcccceeEEE---cCeEEEecCCccCc
Q 001901 778 NALFGFRI-ECIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (998)
Q Consensus 778 ~~~~gf~~-e~~~~~g~~-------~~~~~~~~~~~~f~~LP~aa~i---~~~il~vHgGi~~~ 830 (998)
+..++... +.....+.. ....+.+.+.+++..+|+...+ +.+++++|||+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~h~~~~~~ 145 (219)
T d1g5ba_ 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (219)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred HHHhccccccHHHHcCchHHhhcccchhHHHHHHHHHHHhCccccccccCCCcEEEEECCCchh
Confidence 87765432 111111111 0111234667788888887654 56899999998754
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.53 E-value=4.6e-14 Score=148.25 Aligned_cols=127 Identities=16% Similarity=0.101 Sum_probs=84.3
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchh
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 778 (998)
+|.||||||||+..|.++|+.+....... .....+||+||+||||+++.||+.+|..|+.. .++++|+||||.+.+.
T Consensus 2 ~I~visDiHg~~~~l~~~l~~i~~~~~~~-~~~D~ii~~GDlvd~G~~~~evi~~l~~l~~~--~~v~~v~GNHD~~~~~ 78 (251)
T d1nnwa_ 2 YVAVLANIAGNLPALTAALSRIEEMREEG-YEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIAM 78 (251)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHHH
T ss_pred EEEEEEccccCHHHHHHHHHHHHHhhccC-CCCcEEEEecCcCCCCCCcHHHHHHHHHHhhc--CCEEEEeccHHHHHHh
Confidence 58999999999999999998763211000 00117999999999999999999999998765 4799999999988765
Q ss_pred hhcCChHHHHHHhCCC----------cchhhhhhhhhhhcccceeEEE---cCeEEEecCCcc
Q 001901 779 ALFGFRIECIERMGER----------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIG 828 (998)
Q Consensus 779 ~~~gf~~e~~~~~g~~----------~~~~~~~~~~~~f~~LP~aa~i---~~~il~vHgGi~ 828 (998)
..+++........... ....+-....+++..+|..... +.+++|+||++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~ 141 (251)
T d1nnwa_ 79 SDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPI 141 (251)
T ss_dssp SCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSS
T ss_pred ccccccccchhhhhccchhHHHhhHHHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCcc
Confidence 5443221111000000 0011223445566777766433 458999999764
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.07 E-value=1.1e-10 Score=119.68 Aligned_cols=74 Identities=11% Similarity=0.125 Sum_probs=61.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
..|.++|||||++++|.++++.+.....+ -+||+||++|||+.+.|+..++..|+..- ..++.|+||||....
T Consensus 6 ~~i~~~sd~hg~~eale~~~~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~~~L~~~~-~pv~~i~GNHD~~~~ 78 (228)
T d1uf3a_ 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEAH-LPTAYVPGPQDAPIW 78 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGGC-SCEEEECCTTSCSHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCccchHHHHhhhhhcccc-ceEEEEecCCCchhh
Confidence 45889999999999999999876433333 69999999999999999999998887653 359999999998654
Q ss_pred h
Q 001901 778 N 778 (998)
Q Consensus 778 ~ 778 (998)
.
T Consensus 79 ~ 79 (228)
T d1uf3a_ 79 E 79 (228)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.64 E-value=1.7e-07 Score=91.51 Aligned_cols=63 Identities=19% Similarity=0.349 Sum_probs=48.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
++|.|++||||++..|.++++.+.....+ .++++||+++. +++..+..+. ..++.++||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENLN----ANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGCS----SEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCC------EEEECCCccCH-----HHHHHHhhcC----ccEEEEccccccc
Confidence 47899999999999999999875433333 79999999975 4555544443 4689999999964
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=5.4e-09 Score=104.09 Aligned_cols=70 Identities=19% Similarity=0.363 Sum_probs=54.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--------HHHHHHHHHhhhcCCCcEEEee
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------LETITLLLALKVEYPNNVHLIR 769 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------~evl~ll~~lk~~~p~~v~llr 769 (998)
++|.|||||||++.+|.++|+.+.....+ .+||+||+||+|+.+ .+++..+..+ ...++.++
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D------~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~ 71 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEV----AHKVIAVR 71 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT----GGGEEECC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCC------EEEEcCcccccCccchhhhccCcHHHHHHHHhc----CCcEEEec
Confidence 57999999999999999999877543333 799999999998754 3455555444 35799999
Q ss_pred cCccccch
Q 001901 770 GNHEAADI 777 (998)
Q Consensus 770 GNHE~~~~ 777 (998)
||||....
T Consensus 72 GNhD~~~~ 79 (184)
T d1su1a_ 72 GNCDSEVD 79 (184)
T ss_dssp CTTCCHHH
T ss_pred CCCCchhh
Confidence 99998543
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.29 E-value=1.9e-06 Score=86.31 Aligned_cols=125 Identities=21% Similarity=0.289 Sum_probs=80.6
Q ss_pred eEEEecCCCCHHH------HHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcc
Q 001901 700 IKIFGDLHGQFGD------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (998)
Q Consensus 700 i~vvGDiHG~~~d------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 773 (998)
|.||+|+||+... |.++|+.-+. + .+|++||++++ ||+.+|..++ ..+++++||||
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~v---D------~ii~~GDi~~~-----~~l~~l~~l~----~~v~~V~GN~D 67 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKI---N------YVLCTGNVCSQ-----EYVEMLKNIT----KNVYIVSGDLD 67 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTC---C------EEEECSCCCCH-----HHHHHHHHHC----SCEEECCCTTC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCC---C------EEEECCCCCCH-----HHHHHHHhhC----CCEEEEcCCCC
Confidence 7899999986432 4555553221 2 68999999974 8999888774 36899999999
Q ss_pred ccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEE--c-CeEEEecCCccCcccCHHhhhhccCCcccCCCC
Q 001901 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850 (998)
Q Consensus 774 ~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~ 850 (998)
...... ..++...||....+ + .+++++||-...
T Consensus 68 ~~~~~~-----------------------~~~~~~~lp~~~~~~~~~~~i~l~H~~~~~--------------------- 103 (193)
T d2a22a1 68 SAIFNP-----------------------DPESNGVFPEYVVVQIGEFKIGLMHGNQVL--------------------- 103 (193)
T ss_dssp CSCCBC-----------------------CGGGTBCCCSEEEEEETTEEEEEECSTTSS---------------------
T ss_pred cchhhh-----------------------hHHHHhhCCccEEEEECCEEEEEEeccCCC---------------------
Confidence 743221 11233456655433 3 367888863210
Q ss_pred cceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCe
Q 001901 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH 917 (998)
Q Consensus 851 ~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~ 917 (998)
| ...++.+.++++..+.+++|-||.=++ ..+. .+++
T Consensus 104 ----------~-------------------~~~~~~l~~~~~~~~~dvvi~GHTH~~-~~~~-~~g~ 139 (193)
T d2a22a1 104 ----------P-------------------WDDPGSLEQWQRRLDCDILVTGHTHKL-RVFE-KNGK 139 (193)
T ss_dssp ----------S-------------------TTCHHHHHHHHHHHTCSEEEECSSCCC-EEEE-ETTE
T ss_pred ----------C-------------------CCCHHHHHHHHhhcCCCEEEEcCccCc-eEEE-ECCE
Confidence 0 013456778888889999999999775 3333 4554
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.21 E-value=4.6e-06 Score=85.69 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=52.7
Q ss_pred cCCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHH---------------------
Q 001901 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLL--------------------- 755 (998)
Q Consensus 697 ~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~--------------------- 755 (998)
..+|.+|+|||++++.|.++++.+.-...+ -+|+.||++|.+..+.+...++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D------~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~ 75 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 75 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhH
Confidence 357999999999999999988766433222 58999999998876654333222
Q ss_pred ----HhhhcCCCcEEEeecCccccc
Q 001901 756 ----ALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 756 ----~lk~~~p~~v~llrGNHE~~~ 776 (998)
..-....-.++++.||||...
T Consensus 76 ~~~~~~L~~~~~pv~~i~GNHD~~~ 100 (257)
T d2yvta1 76 DKFFREIGELGVKTFVVPGKNDAPL 100 (257)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCCH
T ss_pred HHHHHHHHhcCCcEEEEeCCCcchh
Confidence 211233457999999999754
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.11 E-value=5.3e-06 Score=82.08 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=43.3
Q ss_pred CCeEEEecCCCCHHH--HHHHHHH-cCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFGD--LMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~d--L~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
++|.||+|+||+... |.+.+.. +.....+ .++++||+++ .|++.+|..+. ..++.++||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D------~Ii~~GDi~~-----~e~l~~l~~~~----~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCC------EEEEccCccc-----hhhHHHHHhhC----CceEEEeCCcCc
Confidence 468999999997643 2233322 2211122 6889999996 68999888764 358999999995
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.09 E-value=2.4e-05 Score=76.59 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=44.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|.|++|+||++..|.++++.+.- ..+ .++++||++..+...+ . ..++.++||||.
T Consensus 4 ~kI~viSD~Hgn~~al~~vl~~~~~-~~D------~iih~GD~~~~~~~~~-----------~--~~~~~V~GN~D~ 60 (173)
T d3ck2a1 4 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSELRPDSPL-----------W--EGIRVVKGNMDF 60 (173)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCSCTTCGG-----------G--TTEEECCCTTCC
T ss_pred CEEEEEeccCCCHHHHHHHHHHhhc-CCC------EEEECCcccCcccchh-----------h--cCCeEEecCccc
Confidence 4699999999999999999987632 122 6899999998765431 1 468999999995
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.93 E-value=0.00047 Score=73.03 Aligned_cols=72 Identities=22% Similarity=0.240 Sum_probs=47.3
Q ss_pred CCeEEEecCC-C------------CHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhh---hcC
Q 001901 698 APIKIFGDLH-G------------QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK---VEY 761 (998)
Q Consensus 698 ~~i~vvGDiH-G------------~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk---~~~ 761 (998)
++++.++|+| | ++..|.++++.+.-...+ -+|+.||++|++.-+.+.+..+..+. ...
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D------~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~ 74 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKEH 74 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHhhHHhc
Confidence 4689999999 3 134455555544322222 58899999999877777665543322 123
Q ss_pred CCcEEEeecCcccc
Q 001901 762 PNNVHLIRGNHEAA 775 (998)
Q Consensus 762 p~~v~llrGNHE~~ 775 (998)
.-.|+++.||||..
T Consensus 75 ~i~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCCCccc
Confidence 34699999999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=96.71 E-value=0.001 Score=65.38 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=29.3
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.+++|||+..+-...-+.+.+|-.| +.+.++|+||||..
T Consensus 46 ~v~~LGD~~~~~~~~~~~~~~l~~L----~g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 46 TLYHLGDFTWHFNDKNEYLRIWKAL----PGRKILVMGNHDKD 84 (188)
T ss_dssp EEEECSCCBSCSCCTTSHHHHHHHS----SSEEEEECCTTCCC
T ss_pred EEEEeCCccccCCCHHHHHHHHHHC----CCceEEEecCCCch
Confidence 6899999987544444566666666 46789999999963
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=96.40 E-value=0.0024 Score=66.22 Aligned_cols=72 Identities=19% Similarity=0.236 Sum_probs=46.8
Q ss_pred CCeEEEecCC---------CC---HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcE
Q 001901 698 APIKIFGDLH---------GQ---FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765 (998)
Q Consensus 698 ~~i~vvGDiH---------G~---~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v 765 (998)
++|..|+|+| |. ...|.++++.+......-| -+|+.||++|+|.. +.+..+..+-.+.+-.+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D----~vv~~GDl~~~~~~--~~y~~~~~~l~~l~~p~ 74 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD----AVVVSGDIVNCGRP--EEYQVARQILGSLNYPL 74 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS----EEEEESCCBSSCCH--HHHHHHHHHHTTCSSCE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCC----EEEECcccCcCCcc--hhHHHHHHHHhccCCCE
Confidence 4688999999 22 2446666666532211111 58889999998853 44455544444456679
Q ss_pred EEeecCcccc
Q 001901 766 HLIRGNHEAA 775 (998)
Q Consensus 766 ~llrGNHE~~ 775 (998)
+++.||||..
T Consensus 75 ~~i~GNHD~~ 84 (271)
T d3d03a1 75 YLIPGNHDDK 84 (271)
T ss_dssp EEECCTTSCH
T ss_pred EEEecCccch
Confidence 9999999974
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.46 E-value=0.0065 Score=61.98 Aligned_cols=71 Identities=18% Similarity=0.288 Sum_probs=44.1
Q ss_pred CCeEEEecCCC----C--------HHHHHHHHHHcCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhcC
Q 001901 698 APIKIFGDLHG----Q--------FGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVEY 761 (998)
Q Consensus 698 ~~i~vvGDiHG----~--------~~dL~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~~ 761 (998)
.+++.|.|||= . ...|.++++.+.. +..+ -+|..||+++.|... .+ ...+|..+....
T Consensus 5 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD------~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~ 78 (256)
T d2hy1a1 5 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 78 (256)
T ss_dssp EEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCS------EEEECSCCBSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCChhHHHHHHHHhhhhhhhc
Confidence 46889999992 1 2346666665421 1112 578899999998643 12 223333333344
Q ss_pred CCcEEEeecCccc
Q 001901 762 PNNVHLIRGNHEA 774 (998)
Q Consensus 762 p~~v~llrGNHE~ 774 (998)
+-.+++++||||.
T Consensus 79 ~~p~~~v~GNHD~ 91 (256)
T d2hy1a1 79 GAELVWVMGNHDD 91 (256)
T ss_dssp TCEEEECCCTTSC
T ss_pred CCCEEEEcccccc
Confidence 5579999999995
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=94.67 E-value=0.011 Score=60.64 Aligned_cols=72 Identities=19% Similarity=0.204 Sum_probs=46.9
Q ss_pred CeEEEecCCCC-------------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCC----CChHHHHHHHH
Q 001901 699 PIKIFGDLHGQ-------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG----QHSLETITLLL 755 (998)
Q Consensus 699 ~i~vvGDiHG~-------------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG----~~s~evl~ll~ 755 (998)
++.|++|+|=. ...|.++++.+.....+ -+|++||++|.+ ....+.+..++
T Consensus 5 ~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~D------fVv~~GDl~~~~~~~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 5 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 78 (320)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCC------EEEECCCCCCCCCcchhHHHHHHHHHH
Confidence 58899999921 33455555544322222 588899999976 23445555555
Q ss_pred HhhhcCCCcEEEeecCccccc
Q 001901 756 ALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 756 ~lk~~~p~~v~llrGNHE~~~ 776 (998)
..-...+..++.+.||||...
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~ 99 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYN 99 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHH
T ss_pred HHHHHcCCCEEEecccCcccc
Confidence 544455678999999999753
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=93.99 E-value=0.3 Score=50.95 Aligned_cols=69 Identities=22% Similarity=0.167 Sum_probs=40.7
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCC-CCCCCCccceeEEEecccc-CCCCC---hH---HHHHHHHHhhhcCCCcEEEeec
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGS-PSTAGDIAYIDYLFLGDYV-DRGQH---SL---ETITLLLALKVEYPNNVHLIRG 770 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~-~~~~~~~~~~~~vfLGDyV-DRG~~---s~---evl~ll~~lk~~~p~~v~llrG 770 (998)
++.|+||++-.......+...... ...+ -+|++||++ +.|.. .. +-+.++-.+....| ++.++|
T Consensus 9 ~F~v~GD~g~~~~~~~~~~~~~~~~~~pd------fvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P--~~~~~G 80 (312)
T d2qfra2 9 TFGLIGDLGQSFDSNTTLSHYELSPKKGQ------TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAG 80 (312)
T ss_dssp EEEEECSCCSBHHHHHHHHHHHHCSSCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCC
T ss_pred EEEEEeeCCCCCchHHHHHHHHHcCCCCC------EEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcce--EEEecc
Confidence 488999998777666555443211 1111 478899997 22321 11 23334444433344 899999
Q ss_pred Ccccc
Q 001901 771 NHEAA 775 (998)
Q Consensus 771 NHE~~ 775 (998)
|||..
T Consensus 81 NHD~~ 85 (312)
T d2qfra2 81 NHEIE 85 (312)
T ss_dssp GGGTC
T ss_pred ccccc
Confidence 99964
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=92.19 E-value=5.4 Score=40.01 Aligned_cols=108 Identities=12% Similarity=0.093 Sum_probs=51.8
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~ 319 (998)
.+++.|+.++ .+..||..+. +-...-.... ..........++.+++.|+.++. +..|+....
T Consensus 160 ~~l~sgs~d~-----~i~i~d~~~~--~~~~~~~~~~----~~i~~v~~~p~~~~l~~~~~d~~------v~~~d~~~~- 221 (311)
T d1nr0a1 160 FRIISGSDDN-----TVAIFEGPPF--KFKSTFGEHT----KFVHSVRYNPDGSLFASTGGDGT------IVLYNGVDG- 221 (311)
T ss_dssp CEEEEEETTS-----CEEEEETTTB--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------EEEEETTTC-
T ss_pred eeeccccccc-----cccccccccc--cccccccccc----ccccccccCcccccccccccccc------ccccccccc-
Confidence 4677777654 5778898876 3333221111 11122222336677777775432 333333322
Q ss_pred eEEEEECCCCCCCCccee-----EEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 320 RWEWAIAPGVSPSPRYQH-----AAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 320 ~W~w~~~~g~~P~pR~~h-----sav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.-....... .....+| ++++. +++.++.||.+ ..|.+||.++.+-.
T Consensus 222 ~~~~~~~~~--~~~~~~h~~~V~~~~~s~~~~~l~tgs~D---------g~v~iwd~~t~~~~ 273 (311)
T d1nr0a1 222 TKTGVFEDD--SLKNVAHSGSVFGLTWSPDGTKIASASAD---------KTIKIWNVATLKVE 273 (311)
T ss_dssp CEEEECBCT--TSSSCSSSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTTEEE
T ss_pred ccccccccc--ccccccccccccccccCCCCCEEEEEeCC---------CeEEEEECCCCcEE
Confidence 111111111 1111111 22332 46777777753 24889999988643
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.92 E-value=0.02 Score=59.08 Aligned_cols=23 Identities=4% Similarity=0.186 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccc
Q 001901 884 PDRVMEFCNNNDLQLIVRAHECV 906 (998)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~ 906 (998)
...+.+.|+++++++++-||.=.
T Consensus 200 ~~~~~~ll~~~~v~~~~~GH~H~ 222 (302)
T d1utea_ 200 VKQLLPLLTTHKVTAYLCGHDHN 222 (302)
T ss_dssp HHHTHHHHHHTTCSEEEECSSSS
T ss_pred hhhhhHHHHhcCceEEEeCCCcc
Confidence 46788899999999999999854
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=87.43 E-value=24 Score=38.68 Aligned_cols=113 Identities=16% Similarity=0.147 Sum_probs=65.4
Q ss_pred CcEEEEECCCCc--EEEecCCCC-----CCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 150 ADVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
+.++.+|..|.+ |+.-..... ........+.+..+++||+... ...++.+|..+....|.... .+
T Consensus 76 ~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~g~l~Alda~tG~~~w~~~~-~~ 147 (560)
T d1kv9a2 76 SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQT-TD 147 (560)
T ss_dssp GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEEC-SC
T ss_pred CeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEEeC-------CCEEEEEECCCCcEEeccCc-cC
Confidence 478999999874 875322110 1111223345566778777643 24689999988766687653 11
Q ss_pred CCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 223 ~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.........+-+++.+ .+|+-+.......-..+..||..+....|+.-
T Consensus 148 ~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 195 (560)
T d1kv9a2 148 PAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (560)
T ss_dssp TTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred cccceeeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeee
Confidence 2222223334456666 45543322223334579999999998788764
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.54 E-value=23 Score=35.37 Aligned_cols=92 Identities=14% Similarity=0.093 Sum_probs=45.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.++|..+.++...... ..... .+.... .+..++.|+. ...+.++|..+.. -.... . ....
T Consensus 144 ~v~i~~~~~~~~~~~~~~---h~~~v-~~~~~~~~~~~~~~~~~------~~~i~~~d~~~~~--~~~~~-~----~~~~ 206 (388)
T d1erja_ 144 LIRIWDIENRKIVMILQG---HEQDI-YSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQ--CSLTL-S----IEDG 206 (388)
T ss_dssp CEEEEETTTTEEEEEECC---CSSCE-EEEEECTTSSEEEEEET------TSEEEEEETTTTE--EEEEE-E----CSSC
T ss_pred cccccccccccccccccc---ccccc-ccccccccccccccccc------ceeeeeeeccccc--ccccc-c----cccc
Confidence 577888888776554322 11111 112222 2344455543 2468889988752 11111 1 1111
Q ss_pred ccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..++... .++.+++.|+.++ .+..||..+.
T Consensus 207 ~~~~~~~~~~~~~l~~~~~d~-----~i~i~~~~~~ 237 (388)
T d1erja_ 207 VTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETG 237 (388)
T ss_dssp EEEEEECSTTCCEEEEEETTS-----CEEEEETTTC
T ss_pred cccccccCCCCCeEEEEcCCC-----eEEEeecccC
Confidence 1222222 2335777777664 5788888876
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.79 E-value=24 Score=34.79 Aligned_cols=178 Identities=13% Similarity=0.092 Sum_probs=79.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+.+||+............. ..+ .-...+.. ++.+++.|+. ...+.++|+.+.. .+.... + . ..
T Consensus 119 g~i~iwd~~~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~l~s~~~------d~~i~~~~~~~~~-~~~~~~--~--~-~~ 184 (337)
T d1gxra_ 119 STLSIWDLAAPTPRIKAELTS-SAP-ACYALAISPDSKVCFSCCS------DGNIAVWDLHNQT-LVRQFQ--G--H-TD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEEC-SSS-CEEEEEECTTSSEEEEEET------TSCEEEEETTTTE-EEEEEC--C--C-SS
T ss_pred ccccccccccccccccccccc-ccc-ccccccccccccccccccc------ccccccccccccc-cccccc--c--c-cc
Confidence 367788887766544332200 011 11222222 3355555543 2358889988753 122211 1 1 11
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.+++...++..++.|+.++ .+..||+.+. +-........ .....+...++.+++.|+.++
T Consensus 185 ~v~~l~~s~~~~~~~~~~~d~-----~v~i~d~~~~--~~~~~~~~~~-----~i~~l~~~~~~~~l~~~~~d~------ 246 (337)
T d1gxra_ 185 GASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESS------ 246 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTS------
T ss_pred ccccccccccccccccccccc-----cccccccccc--eeeccccccc-----ceEEEEEcccccccceecccc------
Confidence 112222323345677776653 5778898776 3211111111 111122233566666776543
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~-~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.+..++........ .... ... -.++.+ .++++++.|+.+ +.+.+||..+.+
T Consensus 247 ~i~i~d~~~~~~~~---~~~~--~~~-i~~v~~s~~g~~l~s~s~D---------g~i~iwd~~~~~ 298 (337)
T d1gxra_ 247 NVEVLHVNKPDKYQ---LHLH--ESC-VLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGA 298 (337)
T ss_dssp CEEEEETTSSCEEE---ECCC--SSC-EEEEEECTTSSEEEEEETT---------SEEEEEETTTCC
T ss_pred cccccccccccccc---cccc--ccc-cceEEECCCCCEEEEEeCC---------CeEEEEECCCCC
Confidence 23444444332221 1111 111 122222 256677777753 347888887764
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=82.22 E-value=40 Score=36.84 Aligned_cols=114 Identities=16% Similarity=0.170 Sum_probs=65.9
Q ss_pred CCcEEEEECCCCc--EEEecCCCC-----CCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec
Q 001901 149 TADVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (998)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~ 221 (998)
.+.++.+|..|.+ |+.-..... ........+.++.++++|+... ...++.+|..+....|..-...
T Consensus 86 ~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~-------~g~l~alda~tG~~~W~~~~~~ 158 (573)
T d1kb0a2 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFE 158 (573)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTT
T ss_pred CCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEec-------ccceeeeccccccceecccCcc
Confidence 3478999999874 875322110 0111223355667788777532 2468999998876678765322
Q ss_pred CCCCCCCcccEEEEECCcEEEEEcCCCC-CCCcccEEEEECCCCCceEEEc
Q 001901 222 GPGPGPRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 222 g~~P~~R~~hs~~~~~~~~Lyv~GG~~g-~~~lndv~~yD~~s~~~~W~~v 271 (998)
+....-....+-+++++ .+| +|+... ...-..+..||..+....|+.-
T Consensus 159 ~~~~~~~~~~~p~v~~~-~vi-vg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 207 (573)
T d1kb0a2 159 GQKGSLTITGAPRVFKG-KVI-IGNGGAEYGVRGYITAYDAETGERKWRWF 207 (573)
T ss_dssp TCCSSCBCCSCCEEETT-EEE-ECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCcceEEeecceEEEec-cEE-EeeccccccccceEEEEecCCccceeeee
Confidence 22111122333456666 444 454432 2334679999999998778753
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.18 E-value=23 Score=34.01 Aligned_cols=141 Identities=9% Similarity=0.063 Sum_probs=67.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
..+.+||+.+.+-....... . ..-.+...-++ +++.|+. ...+.+||+.... ....+. .......
T Consensus 197 g~i~~~d~~~~~~~~~~~~~---~-~~v~~~~~~~~-~l~s~s~------d~~i~iwd~~~~~-~~~~~~---~~~~~~~ 261 (342)
T d2ovrb2 197 TSIRVWDVETGNCIHTLTGH---Q-SLTSGMELKDN-ILVSGNA------DSTVKIWDIKTGQ-CLQTLQ---GPNKHQS 261 (342)
T ss_dssp SCEEEEETTTCCEEEEECCC---C-SCEEEEEEETT-EEEEEET------TSCEEEEETTTCC-EEEEEC---STTSCSS
T ss_pred CeEEEeecccceeeeEeccc---c-cceeEEecCCC-EEEEEcC------CCEEEEEeccccc-cccccc---ccceeee
Confidence 46788888876644332211 1 11122233344 4555553 2468999988753 122221 1122222
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCcc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~lyvfGG~~~~~~~~~ 308 (998)
...+..... .+++.|+.++ .+..||+.+.....+... ... +.....-.++.. .++.+++.|+.++.....-
T Consensus 262 ~~~~~~~~~-~~~~s~s~Dg-----~i~iwd~~tg~~i~~~~~-~~~-~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l 333 (342)
T d2ovrb2 262 AVTCLQFNK-NFVITSSDDG-----TVKLWDLKTGEFIRNLVT-LES-GGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 333 (342)
T ss_dssp CEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEEE-CTT-GGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred ceeecccCC-CeeEEEcCCC-----EEEEEECCCCCEEEEEec-ccC-CCCCCCEEEEEECCCCCEEEEEeCCCCCeeEE
Confidence 333334455 5777787664 588899988732222211 111 000111122222 3556777887766543333
Q ss_pred cEEEE
Q 001901 309 SAYGL 313 (998)
Q Consensus 309 dv~~~ 313 (998)
-+|.|
T Consensus 334 ~~~Df 338 (342)
T d2ovrb2 334 LVLDF 338 (342)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 44444
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=81.28 E-value=29 Score=34.63 Aligned_cols=194 Identities=12% Similarity=0.097 Sum_probs=94.7
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC-CC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG-PG 224 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g-~~ 224 (998)
..+.+++||+.+..+............-.-++++.. ++.+||..+. +.+.++|.... ...+.... ..
T Consensus 44 ~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~-------~~i~~~~~~g~---~~~~~~~~~~g 113 (314)
T d1pjxa_ 44 PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTDGT---FEEIAKKDSEG 113 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETTSC---EEECCSBCTTS
T ss_pred cCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC-------CeEEEEeCCCc---EEEEEeccccc
Confidence 345799999999988776432100111112445544 3478887653 35888998764 33332111 11
Q ss_pred CCCCcccEEEEECCcEEEEEc--CCCC--------CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC--
Q 001901 225 PGPRYGHVMALVGQRYLMAIG--GNDG--------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-- 292 (998)
Q Consensus 225 P~~R~~hs~~~~~~~~Lyv~G--G~~g--------~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-- 292 (998)
...+.-..+++-.++.||+-- +... ......+|++++.. ++..+..... .-...+....++
T Consensus 114 ~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---~~~~~~~~~~----~pNGi~~~~d~d~~ 186 (314)
T d1pjxa_ 114 RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---QMIQVDTAFQ----FPNGIAVRHMNDGR 186 (314)
T ss_dssp CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---CEEEEEEEES----SEEEEEEEECTTSC
T ss_pred cccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC---ceeEeeCCcc----eeeeeEECCCCCcc
Confidence 111122345555555788752 2211 12234688898754 3444322111 011122222222
Q ss_pred --EEEEEeccCCCCCCcccEEEEecCCCCeEEE----EECCCCCCCCcceeEEEE-ECCEEEEEcccCCCCCccccCCeE
Q 001901 293 --LLLLCGGRDASSVPLASAYGLAKHRDGRWEW----AIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSV 365 (998)
Q Consensus 293 --~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w----~~~~g~~P~pR~~hsav~-~~~~L~V~GG~~~~~~~~~~~~dv 365 (998)
.||+..- ....+|.|+...++.-.. ....+.. ...--++++ -++.|||..-. .+.|
T Consensus 187 ~~~lyv~d~------~~~~i~~~d~~~~g~~~~~~~~~~~~~~~--~~~pdGiavD~~GnlyVa~~~---------~g~I 249 (314)
T d1pjxa_ 187 PYQLIVAET------PTKKLWSYDIKGPAKIENKKVWGHIPGTH--EGGADGMDFDEDNNLLVANWG---------SSHI 249 (314)
T ss_dssp EEEEEEEET------TTTEEEEEEEEETTEEEEEEEEEECCCCS--SCEEEEEEEBTTCCEEEEEET---------TTEE
T ss_pred eeEEEEEee------cccceEEeeccCccccceeeEEEEccccc--cccceeeEEecCCcEEEEEcC---------CCEE
Confidence 5776532 235677776544443222 2222211 111223333 25789886321 3569
Q ss_pred EEEECCCCeE
Q 001901 366 AVLDTAAGVW 375 (998)
Q Consensus 366 ~vyD~~t~~W 375 (998)
++||+++.+.
T Consensus 250 ~~~dp~~g~~ 259 (314)
T d1pjxa_ 250 EVFGPDGGQP 259 (314)
T ss_dssp EEECTTCBSC
T ss_pred EEEeCCCCEE
Confidence 9999987653
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=80.30 E-value=25 Score=33.31 Aligned_cols=92 Identities=17% Similarity=0.249 Sum_probs=52.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.+.++|+.+++..+.-..+. .-++++.- +.++|+.++. .+.+.+||+.+.. .+. .++..
T Consensus 12 ~~v~v~D~~t~~~~~~i~~g~-----~p~~va~spdG~~l~v~~~~------~~~i~v~d~~t~~----~~~---~~~~~ 73 (301)
T d1l0qa2 12 DNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN----VIA---TVPAG 73 (301)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE----EEE---EEECS
T ss_pred CEEEEEECCCCeEEEEEECCC-----CceEEEEeCCCCEEEEEECC------CCEEEEEECCCCc----eee---eeecc
Confidence 368899999998776544431 12444444 3478877653 2579999998853 222 11222
Q ss_pred CcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-+.++...++ .+++.+. .+ ..+..+|..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 106 (301)
T d1l0qa2 74 SSPQGVAVSPDGKQVYVTNM-AS----STLSVIDTTSN 106 (301)
T ss_dssp SSEEEEEECTTSSEEEEEET-TT----TEEEEEETTTT
T ss_pred cccccccccccccccccccc-cc----ceeeecccccc
Confidence 233455554444 3444433 22 35677888777
|