Citrus Sinensis ID: 001903

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------100
MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLRIIY
cccccccccccEEEEEEcccEEEEEEEEccccccEEEEEEEEEcccccEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEEcccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHccccccccEEEEEEEEccEEEEEEEEEcccEEEEEEEcccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccEEEEEccccEEEcccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccEEEEccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccHHHccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccEEEcccEEEEEEEEEccccccccccccccEEEEEcccccccccccccEEEEccccccccHHHHHHHcccccEEEEEccHHHHHHHHHHccccEEEEEccccEEEEEccccccccccccccccccccccccccccccEEcccccccccccccccccHHHHHHHc
cccccccccccccEEEcccccEEEEEEEccccccEEEEEEEEEcccccEEEEEEEEccccccEEcccccccccccccccccccccEEEEEEEccccccEEEEEEEccccccEEEccccccEEEccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEEcccccccccccccccccccEEccccEEccccccccccccEEEEEEEcccccEEEEEEEEEcccEEEEcccccEEEEcccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHcHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHcccccccccccccHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEEEEEccccccccccccccEEEEEEcccccccccccEEEEEccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEEEccccEEEEEccccHHcccccccccccccEEEEEccccccEEEcHHHccccccccHHHHHHHHHHHc
matsedkqiprvhnfelvegMKLQInasgssigrnvRVQFQLRNCARTWILHWGFlyrgntnwfipaehpkqgalqtpfvksgEIYLVTIELRDPKIHAIEFILKDGihdrwlrlnhgnfrieipeidtntclqpipKDLIELRAYQnwerrgrpnnspqqqQKDYNDALKELQLQLSngislkdlqsshmtastkpvfknkeqirygvpsypcrrhdVEKWLQKnykghvktntlpssSFVALVENslgadnvisrqsyhmDHEIVVLSKIISSDYHILVAVNMKGAAILHwgiskcspgewlspppdmlpekskmVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSggswiknngenffvglhpmdpkdknfvskvdgddKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLtwnknynvkpreiSEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVgrggqgdvgqRIRDEILVIQRNngcktgmmEEWHQklhnntspddIIICEALLNYIRCGFKIDAYWQTlnchglskqklasydrpivseprfradAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKghnsvisdsfgSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGlkdlnfshppEIMFFISLLLESLClsvvnnedliyctkdwyrvsesyRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQnkvyrrptiiiasritgeeeipvGVVAVltpdmpdvlshvsirarnnkvcfatcFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrKIFRGkyavsvedftpdmvsslsinpFFLRIIY
matsedkqiprvhNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFrieipeidtntclqpIPKDLIELRAYQNWErrgrpnnspqQQQKDYNDALKELQLQLSNGISLKDLQSSHMTastkpvfknkeqirYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAelterckgEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKiyssqpndrEIVRLIMAFVGrggqgdvgqriRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSkqklasydrpivseprfradakesLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGtargrakdLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSqtyqkkfqpsvKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELitlqnkvyrrPTIIiasritgeeeiPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrkIFRGKYAVsvedftpdmvsslsinpfflriiy
MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFvgrggqgdvgqrirdEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFIsllleslclsVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKstnliisdisssnlslsssalpsiPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLRIIY
***********VHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNW*****************************************************EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWL************MVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVS**********SLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDI*************SIPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLRII*
*************NFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWF*****************SGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIE**************KDLIELRAYQNWERRGR**************ALKEL**QL**********************************************************************SLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPE*SKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFF************************WLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIE**********SDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMER********HPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVS*******AQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKST*******************************IFRGKYAVSVEDF****VSSLSINPFFLRIIY
********IPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERR***********KDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLRIIY
**********RVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSH*******************PSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDP*********DGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISS**************RGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLRIIY
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MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLRIIY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query998 2.2.26 [Sep-21-2011]
Q9STV0 1278 Alpha-glucan water dikina yes no 0.977 0.763 0.608 0.0
Q9AWA5 1464 Alpha-glucan water dikina N/A no 0.979 0.668 0.424 0.0
Q8LPT9 1475 Alpha-glucan water dikina N/A no 0.885 0.599 0.466 0.0
Q9SAC6 1399 Alpha-glucan water dikina no no 0.954 0.681 0.450 0.0
Q6ZY51 1196 Phosphoglucan, water diki no no 0.452 0.377 0.242 7e-17
Q2QTC2 1206 Phosphoglucan, water diki no no 0.216 0.179 0.282 1e-14
Q94A41887 Alpha-amylase 3, chloropl no no 0.150 0.169 0.260 0.0005
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=3 Back     alignment and function desciption
 Score = 1240 bits (3208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1004 (60%), Positives = 771/1004 (76%), Gaps = 28/1004 (2%)

Query: 1   MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
           MATS+ +Q      F+L+EGM+LQI  +G   G +VR +F L+NC R WILHWG +Y+GN
Sbjct: 1   MATSKSQQ------FQLIEGMELQITVTGLPNGSSVRAEFHLKNCTRAWILHWGCIYQGN 54

Query: 61  TNWFIPAEHP-KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGN 119
            +W+IP+EH  KQGALQT FVKSG+ Y+V +ELRDP++ AIEF+LKDG H+RWLR ++GN
Sbjct: 55  NHWYIPSEHSSKQGALQTTFVKSGDAYVVILELRDPRVRAIEFVLKDGSHNRWLRQHNGN 114

Query: 120 FRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSN 179
           FR+EIP  D +     IPK LIE RA++ W+R+GRP +S ++QQ DY++A++EL  +L+ 
Sbjct: 115 FRVEIPWNDLH-AHHRIPKTLIERRAHKIWDRKGRPQSSAREQQIDYDNAVRELHAELAR 173

Query: 180 GISLKDLQSSHMTASTKPVFKNK--EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLP 237
           GISL +LQ++    ST PV K +  E     + SY  R+HDV+KWLQK  +   ++ ++ 
Sbjct: 174 GISLDELQAN----STVPVEKEETSEPHHTMIQSYR-RKHDVQKWLQKYTEPINRSGSVK 228

Query: 238 SSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILHWGIS 296
           SS+   L + S+G +N++S++S+H+ ++EI VL + +  D  + +A NM G  +LHWG++
Sbjct: 229 SSALAELSKRSVGQENLVSQKSFHVRNYEITVLQRDVKGDCRLWIATNMAGPTVLHWGVA 288

Query: 297 KCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIW 356
           K S GEWL PPPD+LPEKSK V GACQT FTD+++   S+Q +D+NL++  FVGIQFVIW
Sbjct: 289 KSSAGEWLIPPPDVLPEKSKFVHGACQTQFTDMSSREHSYQFIDINLKRGGFVGIQFVIW 348

Query: 357 SGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERSLMHR 414
           SGG W+ NNG NF V L   D        K+D D+K  +KWLLDEIS REKEAERSLMHR
Sbjct: 349 SGGYWVNNNGANFVVNLKSADSTS----GKLDVDEKYVLKWLLDEISEREKEAERSLMHR 404

Query: 415 FNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQK 474
           FNIA ELTERCK EGE G I IMVWMRFMA RHLTWNKNYNVKPREISEA +RFTNL++K
Sbjct: 405 FNIATELTERCKDEGEGGCIGIMVWMRFMATRHLTWNKNYNVKPREISEALERFTNLMEK 464

Query: 475 IYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNT 534
           IY  QPN REIVRL MA VGRGGQGDVGQRIRDEILVIQRNN CK+GMMEEWHQKLHNN+
Sbjct: 465 IYLQQPNKREIVRLTMALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNS 524

Query: 535 SPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLT 594
           S DD+IICEALLNY+R  F+IDAYWQTL  +GL+K++LASYDRPIVSEPRFR+D+KE L 
Sbjct: 525 SADDVIICEALLNYVRSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLI 584

Query: 595 RDLTMYLKTLKAVHSGADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIH 651
           RDLTMYLKTLKAVHSGADLESAI+T     KGH+     +   LS KL++ L  +K  + 
Sbjct: 585 RDLTMYLKTLKAVHSGADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVR 641

Query: 652 DESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPP 711
           +E+   L+EKLVD+RI+LHP L   R RAKDLLFLDI+L S  KTT+E+ L  LNF++PP
Sbjct: 642 EENTEPLIEKLVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPP 701

Query: 712 EIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLA 771
           EI++ I ++LE+LCLS+VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA
Sbjct: 702 EIIYVICVVLENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLA 761

Query: 772 ERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVAN 831
           +R Q Y    QP+ KYLG LL V+K+ ID FTEE++RA   AVLS L+NRF+P LRK+AN
Sbjct: 762 DRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIAN 821

Query: 832 LGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMP 891
           LGCWQVIS  +  GF+  VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M 
Sbjct: 822 LGCWQVISSADAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMI 881

Query: 892 DVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSS 951
           DVLSHVSIRARN+K+CFATCFDQN+L NL+ KEG+A+SI  KST L+ISD ++S++S+  
Sbjct: 882 DVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRH 941

Query: 952 SALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLR 995
             + S+PRG+  K K F G Y +S ++FT + V S S N  FLR
Sbjct: 942 IFISSVPRGVISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLR 985
Mediates the incorporation of phosphate into alpha-glucan, mostly at the C-6 position of glucose units.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 9EC: .EC: 4
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1 PE=1 SV=2 Back     alignment and function description
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=GWD1 PE=1 SV=2 Back     alignment and function description
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1 Back     alignment and function description
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2 Back     alignment and function description
>sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=AMY3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query998
255572858 1228 alpha-glucan water dikinase, chloroplast 0.924 0.751 0.633 0.0
28393438 1278 unknown protein [Arabidopsis thaliana] 0.977 0.763 0.609 0.0
79485345 1278 phosphoglucan, water dikinase [Arabidops 0.977 0.763 0.608 0.0
297803668 1291 ATGWD2/GWD3 [Arabidopsis lyrata subsp. l 0.982 0.759 0.601 0.0
5051787 1288 putative protein [Arabidopsis thaliana] 0.946 0.733 0.577 0.0
168001040 1341 predicted protein [Physcomitrella patens 0.975 0.726 0.446 0.0
302765535 1309 hypothetical protein SELMODRAFT_266998 [ 0.942 0.718 0.444 0.0
302801007 1309 hypothetical protein SELMODRAFT_233951 [ 0.942 0.718 0.441 0.0
168025388 1338 predicted protein [Physcomitrella patens 0.967 0.721 0.443 0.0
384383722 1464 alpha-glucan water dikinase [Solanum tub 0.979 0.668 0.425 0.0
>gi|255572858|ref|XP_002527361.1| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] gi|223533280|gb|EEF35033.1| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1005 (63%), Positives = 764/1005 (76%), Gaps = 82/1005 (8%)

Query: 1   MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
           MA+S   + PRV +F+LV+GM+ QIN SGS  GRNVR++ QL+NC RTWILHWG ++ GN
Sbjct: 1   MASS---KTPRVKHFQLVDGMQFQINVSGSLKGRNVRIELQLKNCTRTWILHWGCVFHGN 57

Query: 61  TNWFIPAEHP-----KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRL 115
            NWFIP         KQGAL+TPF KSGE Y+V IELRDP +HAIEF+LKDG  +RW+RL
Sbjct: 58  PNWFIPTGQSSGTSYKQGALETPFTKSGEFYVVNIELRDPTLHAIEFVLKDGGSNRWMRL 117

Query: 116 NHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQL 175
           N+GNFR+++P+ D NT   P+PKDLI+ +AY  WE +GRP  +P+QQ++DY+DA++ELQ 
Sbjct: 118 NNGNFRVDLPDHDENTIHPPVPKDLIQHKAYLIWESKGRPVRTPEQQKQDYDDAVRELQN 177

Query: 176 QLSNGISLKDLQSSHMTAST--KPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKT 233
           QL  G SL D+QSS ++AST  K +  ++EQ      SY CRRHDV+ WL K+  GH ++
Sbjct: 178 QLIRGTSLNDVQSSCISASTNTKALADSREQSSCVHSSY-CRRHDVDHWLHKHSVGHERS 236

Query: 234 NTLPSSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILH 292
             +P S+F+ LVE + G D +++ Q++H+ ++EIVVL+K+I  D H LVAVN KG  +LH
Sbjct: 237 TNMPFSAFMDLVERTTGGDKIVTGQNHHVSNYEIVVLNKVIKGDNHTLVAVNSKGTIVLH 296

Query: 293 WGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQ 352
           WG+SK SPGEWL+PP D+LPE+S ++A ACQTYFT+I+T +GSFQ               
Sbjct: 297 WGVSKLSPGEWLAPPSDILPERSTLLAYACQTYFTEISTGKGSFQ--------------- 341

Query: 353 FVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERS 410
                                             VDGD K  VKWLLDEI  RE EAERS
Sbjct: 342 ----------------------------------VDGDGKQIVKWLLDEIYRREIEAERS 367

Query: 411 LMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTN 470
           LM RFNIA EL ERCK EGE GLI I+VW+RFMACRHL WNKNYNVKPREISEAQD+FTN
Sbjct: 368 LMLRFNIATELMERCKFEGESGLIGILVWLRFMACRHLMWNKNYNVKPREISEAQDKFTN 427

Query: 471 LLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKL 530
           LLQKIY SQPN+REI+RLIM  VGRGGQGDVGQRIRDEILVIQRNN CKTGMMEEWHQKL
Sbjct: 428 LLQKIYLSQPNNREIMRLIMLCVGRGGQGDVGQRIRDEILVIQRNNDCKTGMMEEWHQKL 487

Query: 531 HNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAK 590
           HNN+SPDD+IICEALLNYIRCGF+ DAYWQTLN +GL+K+ LASYDRPIVSEP F   AK
Sbjct: 488 HNNSSPDDVIICEALLNYIRCGFRADAYWQTLNANGLTKEMLASYDRPIVSEPHFNTAAK 547

Query: 591 ESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHI 650
           E LTRDLT+YL+TLKAVHSGADLESAIETC        S  F     KL+E + +   + 
Sbjct: 548 EGLTRDLTLYLRTLKAVHSGADLESAIETCLGP-----SSKF-----KLKEIILYDLIY- 596

Query: 651 HDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHP 710
                    +KL++SRIEL  VL T+  RAKDLLF D++L SAI+T ME  LK L+F   
Sbjct: 597 --------FQKLLESRIELRLVLLTSSERAKDLLFFDVALDSAIRTIMESRLKHLSFDRL 648

Query: 711 PEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVL 770
            +IMF+ISL+LE+LCL+ VNNEDLI C KDWYRV ESY+ ND QWALQ KA+LDRLQL+L
Sbjct: 649 QDIMFYISLVLENLCLTTVNNEDLICCIKDWYRVRESYKANDVQWALQTKAVLDRLQLIL 708

Query: 771 AERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVA 830
           A+RS  YQKK QPS +YLG LLG+ K VID FTEEL+RA S  +LS L+NRF+PVLRKVA
Sbjct: 709 ADRSLNYQKKIQPSAQYLGKLLGIGKSVIDMFTEELIRAGSATILSTLVNRFDPVLRKVA 768

Query: 831 NLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDM 890
           +LGCWQVISPVEVCGF+T VNELIT+QN+VYR+PT+IIA+R++GEEEIP GVVAVLTPDM
Sbjct: 769 SLGCWQVISPVEVCGFVTCVNELITIQNRVYRKPTVIIANRVSGEEEIPEGVVAVLTPDM 828

Query: 891 PDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLS 950
           PD+LSHVSIRARN+KVCFATCFDQNIL+NL+LKEGKA+SI LKS NLIISDIS SNLSL+
Sbjct: 829 PDILSHVSIRARNSKVCFATCFDQNILKNLKLKEGKAISISLKSMNLIISDISGSNLSLN 888

Query: 951 SSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLR 995
           SS   SI R +TFKRK F GKYA+SVE+FT +MV + S N  FLR
Sbjct: 889 SSICTSIARPVTFKRKTFYGKYAISVEEFTAEMVGAKSCNIKFLR 933

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|28393438|gb|AAO42141.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79485345|ref|NP_194176.3| phosphoglucan, water dikinase [Arabidopsis thaliana] gi|332278206|sp|Q9STV0.3|GWD2_ARATH RecName: Full=Alpha-glucan water dikinase 2; Flags: Precursor gi|332659506|gb|AEE84906.1| phosphoglucan, water dikinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803668|ref|XP_002869718.1| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] gi|297315554|gb|EFH45977.1| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|5051787|emb|CAB45080.1| putative protein [Arabidopsis thaliana] gi|7269295|emb|CAB79355.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|168001040|ref|XP_001753223.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695509|gb|EDQ81852.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|302765535|ref|XP_002966188.1| hypothetical protein SELMODRAFT_266998 [Selaginella moellendorffii] gi|300165608|gb|EFJ32215.1| hypothetical protein SELMODRAFT_266998 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302801007|ref|XP_002982260.1| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] gi|300149852|gb|EFJ16505.1| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|168025388|ref|XP_001765216.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683535|gb|EDQ69944.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|384383722|gb|AFH88388.1| alpha-glucan water dikinase [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query998
TAIR|locus:2136027 1278 PWD "phosphoglucan, water diki 0.977 0.763 0.578 7.9e-307
TAIR|locus:2019953 1399 SEX1 "STARCH EXCESS 1" [Arabid 0.821 0.586 0.440 9.9e-207
TAIR|locus:2151089 1196 PWD "PHOSPHOGLUCAN WATER DIKIN 0.200 0.167 0.280 9.9e-13
TAIR|locus:2196759887 AMY3 "alpha-amylase-like 3" [A 0.116 0.130 0.285 9.5e-06
TAIR|locus:2136027 PWD "phosphoglucan, water dikinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2944 (1041.4 bits), Expect = 7.9e-307, P = 7.9e-307
 Identities = 581/1004 (57%), Positives = 731/1004 (72%)

Query:     1 MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
             MATS+ +Q      F+L+EGM+LQI  +G   G +VR +F L+NC R WILHWG +Y+GN
Sbjct:     1 MATSKSQQ------FQLIEGMELQITVTGLPNGSSVRAEFHLKNCTRAWILHWGCIYQGN 54

Query:    61 TNWFIPAEHP-KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGN 119
              +W+IP+EH  KQGALQT FVKSG+ Y+V +ELRDP++ AIEF+LKDG H+RWLR ++GN
Sbjct:    55 NHWYIPSEHSSKQGALQTTFVKSGDAYVVILELRDPRVRAIEFVLKDGSHNRWLRQHNGN 114

Query:   120 FRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSN 179
             FR+EIP  D +   + IPK LIE RA++ W+R+GRP +S ++QQ DY++A++EL  +L+ 
Sbjct:   115 FRVEIPWNDLHAHHR-IPKTLIERRAHKIWDRKGRPQSSAREQQIDYDNAVRELHAELAR 173

Query:   180 GISLKDLQSSHMTASTKPVFKNK--EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLP 237
             GISL +LQ++    ST PV K +  E     + SY  R+HDV+KWLQK  +   ++ ++ 
Sbjct:   174 GISLDELQAN----STVPVEKEETSEPHHTMIQSYR-RKHDVQKWLQKYTEPINRSGSVK 228

Query:   238 SSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILHWGIS 296
             SS+   L + S+G +N++S++S+H+ ++EI VL + +  D  + +A NM G  +LHWG++
Sbjct:   229 SSALAELSKRSVGQENLVSQKSFHVRNYEITVLQRDVKGDCRLWIATNMAGPTVLHWGVA 288

Query:   297 KCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIW 356
             K S GEWL PPPD+LPEKSK V GACQT FTD+++   S+Q +D+NL++  FVGIQFVIW
Sbjct:   289 KSSAGEWLIPPPDVLPEKSKFVHGACQTQFTDMSSREHSYQFIDINLKRGGFVGIQFVIW 348

Query:   357 SGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERSLMHR 414
             SGG W+ NNG NF V L   D        K+D D+K  +KWLLDEIS REKEAERSLMHR
Sbjct:   349 SGGYWVNNNGANFVVNLKSADSTS----GKLDVDEKYVLKWLLDEISEREKEAERSLMHR 404

Query:   415 FNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQK 474
             FNIA ELTERCK EGE G I IMVWMRFMA RHLTWNKNYNVKPREISEA +RFTNL++K
Sbjct:   405 FNIATELTERCKDEGEGGCIGIMVWMRFMATRHLTWNKNYNVKPREISEALERFTNLMEK 464

Query:   475 IYSSQPNDREIVRLIMAFXXXXXXXXXXXXXXXEILVIQRNNGCKTGMMEEWHQKLHNNT 534
             IY  QPN REIVRL MA                EILVIQRNN CK+GMMEEWHQKLHNN+
Sbjct:   465 IYLQQPNKREIVRLTMALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNS 524

Query:   535 SPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLT 594
             S DD+IICEALLNY+R  F+IDAYWQTL  +GL+K++LASYDRPIVSEPRFR+D+KE L 
Sbjct:   525 SADDVIICEALLNYVRSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLI 584

Query:   595 RDLTMYLKTLKAVHSGADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIH 651
             RDLTMYLKTLKAVHSGADLESAI+T     KGH+     +   LS KL++ L  +K  + 
Sbjct:   585 RDLTMYLKTLKAVHSGADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVR 641

Query:   652 DESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPP 711
             +E+   L+EKLVD+RI+LHP L   R RAKDLLFLDI+L S  KTT+E+ L  LNF++PP
Sbjct:   642 EENTEPLIEKLVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPP 701

Query:   712 EIMFFIXXXXXXXXXXVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLA 771
             EI++ I          +VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA
Sbjct:   702 EIIYVICVVLENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLA 761

Query:   772 ERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVAN 831
             +R Q Y    QP+ KYLG LL V+K+ ID FTEE++RA   AVLS L+NRF+P LRK+AN
Sbjct:   762 DRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIAN 821

Query:   832 LGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMP 891
             LGCWQVIS  +  GF+  VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M 
Sbjct:   822 LGCWQVISSADAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMI 881

Query:   892 DVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKXXXXXXXXXXXXXXXXXX 951
             DVLSHVSIRARN+K+CFATCFDQN+L NL+ KEG+A+SI  K                  
Sbjct:   882 DVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRH 941

Query:   952 XXXXXXPRGITFKRKIFRGKYAVSVEDFTPDMVSSLSINPFFLR 995
                   PRG+  K K F G Y +S ++FT + V S S N  FLR
Sbjct:   942 IFISSVPRGVISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLR 985
GO:0005524 "ATP binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016301 "kinase activity" evidence=IEA
GO:0016310 "phosphorylation" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
TAIR|locus:2019953 SEX1 "STARCH EXCESS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151089 PWD "PHOSPHOGLUCAN WATER DIKINASE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196759 AMY3 "alpha-amylase-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9STV0GWD2_ARATH2, ., 7, ., 9, ., 40.60850.97790.7636yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.9.40.914
3rd Layer2.7.90.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PWD
PWD (PHOSPHOGLUCAN, WATER DIKINASE); ATP binding / kinase; PHOSPHOGLUCAN, WATER DIKINASE (PWD); FUNCTIONS IN- kinase activity, ATP binding; INVOLVED IN- phosphorylation; LOCATED IN- chloroplast envelope; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro-IPR002192); BEST Arabidopsis thaliana protein match is- SEX1 (STARCH EXCESS 1); alpha-glucan, water dikinase (TAIR-AT1G10760.1); Has 968 Blast hits to 950 proteins in 384 species- Archae - 116; Bacteria - 652; Metazoa - 0; Fungi [...] (1278 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
SEX4
SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase; [...] (379 aa)
      • 0.925
DPE1
DPE1 (DISPROPORTIONATING ENZYME); 4-alpha-glucanotransferase/ catalytic/ cation binding; Encode [...] (576 aa)
      • 0.921
ISA3
ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase; Encodes an isoamylase-like protein. Mutant stud [...] (764 aa)
      • 0.919
RCP1
RCP1 (ROOT CAP 1); maltose transmembrane transporter; Encodes a maltose transporter that is exp [...] (415 aa)
      • 0.867
AT3G29320
glucan phosphorylase, putative; Encodes a plastidic alpha-glucan phosphorylase. In vitro, the e [...] (962 aa)
      • 0.829
PHS2
PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2); phosphorylase/ transferase, transferring glycosyl groups; [...] (841 aa)
      • 0.827
ATLDA
ATLDA (LIMIT DEXTRINASE); alpha-amylase/ limit dextrinase/ pullulanase; Encodes an enzyme thoug [...] (965 aa)
      • 0.823
BAM4
BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding; In vitro assay indicates no bet [...] (531 aa)
      • 0.819
ADG1
ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase; Encodes the sm [...] (520 aa)
      • 0.790
AMY1
AMY1 (ALPHA-AMYLASE-LIKE); alpha-amylase; Predicted to be secreted protein based on signalP pre [...] (423 aa)
      • 0.790

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query998
PLN02784894 PLN02784, PLN02784, alpha-amylase 2e-11
PLN02784894 PLN02784, PLN02784, alpha-amylase 8e-08
PLN02784894 PLN02784, PLN02784, alpha-amylase 0.002
>gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase Back     alignment and domain information 
 Score = 67.7 bits (165), Expect = 2e-11
 Identities = 81/345 (23%), Positives = 121/345 (35%), Gaps = 81/345 (23%)

Query: 44  NCARTWILHWGFLYRGNT--NWFIPAEH--------PKQGALQTPFVKSGE---IYLVTI 90
           +    WILHWG  Y G+T   W  P E          K  A++TP  KS E    Y VTI
Sbjct: 113 SIPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKDYAIETPLKKSSEGDSFYEVTI 172

Query: 91  EL-RDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNW 149
           +L  +  I AI F+LKD     W +    +F++            P+  DL         
Sbjct: 173 DLDPNSSIAAINFVLKDEETGAWYQHKGRDFKV------------PLVDDL--------- 211

Query: 150 ERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGV 209
                P+       K           QLSN I LKD  S            +    R   
Sbjct: 212 -----PDGGNNVGAKKGFGIWPGALGQLSN-ILLKDEGSPSKEQDKSSSELDSAAER--- 262

Query: 210 PSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVL 269
                      K L+  Y+       +        V+NS+                  V 
Sbjct: 263 -----------KGLKGFYEEMPIVKRVA-------VDNSVTV---------------TVR 289

Query: 270 SKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDI 329
               ++   + +  ++ G  ++HWG+ K     W  PP    PE S     A QT     
Sbjct: 290 KCPETAKNLVYLETDLPGDVVVHWGVCKDGAKTWEIPPEPHPPETSLFKNKALQTMLQQK 349

Query: 330 ATARGSFQMVDVNLQKRKFVGIQFVI-WSGGSWIKNNGENFFVGL 373
               GS  +  ++    +  G+ FV+  + G+W++ NG +F+V L
Sbjct: 350 DDGNGSSGLFSLD---GELEGLLFVLKLNEGTWLRCNGNDFYVPL 391

Length = 894
>gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase Back     alignment and domain information
>gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 998
PLN02784894 alpha-amylase 100.0
PLN02784894 alpha-amylase 99.93
PLN023161036 synthase/transferase 97.13
PLN023161036 synthase/transferase 95.9
PF0342387 CBM_25: Carbohydrate binding domain (family 25); I 95.36
PRK06241871 phosphoenolpyruvate synthase; Validated 94.77
PRK05849783 hypothetical protein; Provisional 94.66
PF0342387 CBM_25: Carbohydrate binding domain (family 25); I 92.8
PRK08296603 hypothetical protein; Provisional 92.25
PF0039180 PEP-utilizers: PEP-utilising enzyme, mobile domain 90.48
PRK05878530 pyruvate phosphate dikinase; Provisional 83.98
PRK05865854 hypothetical protein; Provisional 82.5
PF1115440 DUF2934: Protein of unknown function (DUF2934); In 82.18
PRK06354590 pyruvate kinase; Provisional 82.11
>PLN02784 alpha-amylase Back     alignment and domain information 
Probab=100.00  E-value=4.6e-52  Score=492.79  Aligned_cols=293  Identities=25%  Similarity=0.477  Sum_probs=242.0

Q ss_pred             ceeeeecce----eEEEeecCCCCCceEEEEEEEeecCCceEEEeeeeecCC--CccccCCC--CC------CCcccccc
Q 001903           13 HNFELVEGM----KLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN--TNWFIPAE--HP------KQGALQTP   78 (998)
Q Consensus        13 ~~~~~~~~~----~~~~~~~~~~~G~~~~v~~~~~n~~~~liLHWGv~~~~~--~eW~~P~~--~P------k~~A~~Tp   78 (998)
                      ..|.|....    ++-|-|. ..++.+.+|.+.+. .+++|+|||||++.++  +||.+||+  +|      |++|||||
T Consensus        80 k~F~v~~~e~ve~~~~v~l~-~~~~g~~kv~v~t~-~~~~~vLHWGVs~~~~~~~EW~~PP~~~~PpgS~~~~~~A~eT~  157 (894)
T PLN02784         80 ETFPVKRTEKVEGKIYVRLE-EKNEKNWKLSVGCS-IPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKDYAIETP  157 (894)
T ss_pred             eeeeecccceecceeEEEEE-ccCCCcEEEEEEec-CCCCeEEEEeEecCCCCCccccCCCcccCCCCcEEecCeEEecc
Confidence            367765554    2334444 56788999999866 7888999999999885  79999999  44      89999999


Q ss_pred             cccc--cc-ceEEEEEec-CCcceeEEEEEEeccccchhcccCCcccccCCCCCCCCCCCCCchhhhhhhhhhhcccCCC
Q 001903           79 FVKS--GE-IYLVTIELR-DPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGR  154 (998)
Q Consensus        79 f~~s--G~-~~~v~ie~~-d~~i~aI~FvLkde~~~~W~k~~g~nf~v~L~~~~~~~~~~~ip~~Li~~~ay~rWE~~Gk  154 (998)
                      |+++  |+ .+.|+|||+ ++++.||+||||+|++|+||++||+||+|+||+......+.     +...+.+-.|..   
T Consensus       158 f~~~s~~~~~~~v~iel~l~~~~~ai~FVLk~~~~g~W~~~~G~DF~V~l~~~~~~~~~~-----~~~~~~~~~~~~---  229 (894)
T PLN02784        158 LKKSSEGDSFYEVTIDLDPNSSIAAINFVLKDEETGAWYQHKGRDFKVPLVDDLPDGGNN-----VGAKKGFGIWPG---  229 (894)
T ss_pred             ccccccCCcceeEEEEEeeCCceeeEEEEEEeCCCCchhhcCCccEEEecccccccccce-----eehhhhcCcCcC---
Confidence            9996  44 788888988 89999999999999999999999999999999976655541     333788888888   


Q ss_pred             CCCChhhhhHHHHHHHHHHHHHHhcCCChHHHHhhhcCCCCCCCCCChhhhhcCCCCc--ccccCcHHHHHhhhcc--Cc
Q 001903          155 PNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSY--PCRRHDVEKWLQKNYK--GH  230 (998)
Q Consensus       155 p~~~~e~~~~ey~~A~~el~~~l~~G~sl~~l~~~~~~~~t~~~~~~~dql~s~v~r~--~rk~~d~~~~l~k~~~--~~  230 (998)
                                                 .|.+|...+.++.+.   ++++|=.+++++.  +.+++     |++||+  |+
T Consensus       230 ---------------------------~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  274 (894)
T PLN02784        230 ---------------------------ALGQLSNILLKDEGS---PSKEQDKSSSELDSAAERKG-----LKGFYEEMPI  274 (894)
T ss_pred             ---------------------------ccccccchhccCCCC---CcccCCCccccccccccccc-----chhhhhccce
Confidence                                       888888888887652   2333311222322  22223     788998  88


Q ss_pred             cccCCCCchhHHHHHHhhcCCCcceeeeeeecceEEEEEEEee--CCceEEEEEecCCCCeEEEeeeecCCCCcccCCCC
Q 001903          231 VKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKII--SSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPP  308 (998)
Q Consensus       231 ~k~~~~p~~~~a~~~~~~~~~~~vl~kk~f~l~~ei~V~v~~~--~gk~~V~v~Td~~~~lVLHWGV~k~~~~EW~~PP~  308 (998)
                      .|+  +.++                        +.|.|+|+++  .+|++|+|+||+|++|||||||||++++||++||+
T Consensus       275 ~k~--~~~~------------------------~~~~v~v~~~~~~~k~~v~v~td~~~~vvlHWgV~k~~~~eW~~Pp~  328 (894)
T PLN02784        275 VKR--VAVD------------------------NSVTVTVRKCPETAKNLVYLETDLPGDVVVHWGVCKDGAKTWEIPPE  328 (894)
T ss_pred             eeE--EEec------------------------ceEEEEEecCCCCCceEEEEEcCCCCCEEEEeEeccCCCCcccCCCC
Confidence            777  4454                        8899999984  58999999999999999999999998999999999


Q ss_pred             CCCCCccccccceeeeeeecccCCCceeeEEEEEccCCceeEEEEEEec-CCcccccCCcceEEecCCCCCc
Q 001903          309 DMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWS-GGSWIKNNGENFFVGLHPMDPK  379 (998)
Q Consensus       309 ~~~P~gSv~~~~A~ET~f~~~~~~~~~~q~veI~l~~d~~~GI~FVLk~-g~~WiKn~G~DF~VpL~~~~~~  379 (998)
                      +++|+||++++|||||||++.+++.++++.++|   ++.|.||+||||+ +|+||||+|+||||||+..++.
T Consensus       329 ~~~P~~sv~~~kA~eT~~~~~~~~~~~~~~~~l---d~~~~g~~FVLk~~~g~W~~~~G~DF~Ipl~~~~~~  397 (894)
T PLN02784        329 PHPPETSLFKNKALQTMLQQKDDGNGSSGLFSL---DGELEGLLFVLKLNEGTWLRCNGNDFYVPLLTSSSL  397 (894)
T ss_pred             CCCCCcceecccccccccccccCCCcceEEEec---CCCeeEEEEEEECCCCchhhcCCccEEEeCCchhcc
Confidence            999999999999999999999998888988777   7899999999999 7999999999999999987544

>PLN02784 alpha-amylase Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PRK06241 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PRK05849 hypothetical protein; Provisional Back     alignment and domain information
>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PRK08296 hypothetical protein; Provisional Back     alignment and domain information
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>PRK05878 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK05865 hypothetical protein; Provisional Back     alignment and domain information
>PF11154 DUF2934: Protein of unknown function (DUF2934); InterPro: IPR021327 This bacterial family of proteins has no known function Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query998
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 88.4 bits (218), Expect = 6e-18
 Identities = 97/697 (13%), Positives = 196/697 (28%), Gaps = 232/697 (33%)

Query: 161 QQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKE--QIRYGVP-------- 210
           + Q  Y D L   +        + +     +    K +   +E   I             
Sbjct: 13  EHQYQYKDILSVFEDAF-----VDNFDCKDVQDMPKSILSKEEIDHI-IMSKDAVSGTLR 66

Query: 211 ------SYPCRRHD--VEKWLQKNY-------KGHVKTNTLPSSSFVALVENSLGADNV- 254
                 S         VE+ L+ NY       K   +  ++ +  ++    + L  DN  
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRLYNDNQV 125

Query: 255 -----ISRQSYHMDHEI-VVLSKIISSDYHILVAVN-MKGAAILHWGISKCSPGEWLSPP 307
                +SR       ++   L ++  +     V ++ + G+     G             
Sbjct: 126 FAKYNVSRL--QPYLKLRQALLELRPAKN---VLIDGVLGS-----G------------- 162

Query: 308 PDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIK---- 363
                 K+ +    C                    +Q +    I F       W+     
Sbjct: 163 ------KTWVALDVCL----------------SYKVQCKMDFKI-F-------WLNLKNC 192

Query: 364 -------NNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFN 416
                     +     +      D N+ S+ D    +K  +  I    +   R L+    
Sbjct: 193 NSPETVLEMLQKLLYQI------DPNWTSRSDHSSNIKLRIHSI----QAELRRLLKS-- 240

Query: 417 IAAELTERCKGEGELGLIAIM--VWMR-----F-MACRHL--TWNKN-------YNVKPR 459
              +  E C       L+ ++  V        F ++C+ L  T  K              
Sbjct: 241 ---KPYENC-------LL-VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 460 EISEAQDRFT-----NLLQKIYSSQPND--REIVR---LIMAFVGRGGQGDVGQRIRDEI 509
            +       T     +LL K    +P D  RE++      ++ +           IRD +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE--------SIRDGL 341

Query: 510 LVIQ--RNNGCK--TGMME--------EWHQKLHNNTS--PDDIIICEALLNYIRCGFKI 555
                 ++  C   T ++E          ++K+ +  S  P    I   LL         
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--------- 392

Query: 556 DAYWQTL--NCHGLSKQKLASY---DRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSG 610
              W  +  +   +   KL  Y   ++            KES     ++YL+    + + 
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEK----------QPKESTISIPSIYLELKVKLENE 442

Query: 611 ADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHI--HDESINQ-----LMEKL- 662
             L  +I   Y    +  SD              +  +HI  H ++I       L   + 
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLD-----QYFYSHIGHHLKNIEHPERMTLFRMVF 497

Query: 663 -----VDSRIELHPVLGTARGRAKDLLFLDISL----ASAIKTTMERGLKDL-NFSHPPE 712
                ++ +I        A G   + L   +              ER +  + +F    E
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTL-QQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556

Query: 713 IMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYR 749
                S   + L ++++  ++ I+         E+++
Sbjct: 557 ENLICSKYTDLLRIALMAEDEAIF--------EEAHK 585
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query998
2c3v_A102 Alpha-amylase G-6; carbohydrate-binding module, st 93.82
2c3v_A102 Alpha-amylase G-6; carbohydrate-binding module, st 92.18
2laa_A104 Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Pa 92.05
3t05_A606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 90.43
2ols_A 794 Phosphoenolpyruvate synthase; MC structural genomi 87.4
1zym_A258 Enzyme I; phosphotransferase; 2.50A {Escherichia c 87.12
2e28_A587 Pyruvate kinase, PK; allosteric, transferase; 2.40 87.1
2laa_A104 Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Pa 86.92
1h6z_A 913 Pyruvate phosphate dikinase; transferase, tropical 83.08
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A* Back     alignment and structure
Probab=93.82  E-value=0.12  Score=48.41  Aligned_cols=65  Identities=18%  Similarity=0.424  Sum_probs=45.8

Q ss_pred             CCeEEEeeeecCCCCcccCCCCCCCCCccccccceeeeeeecccCCCceeeEEEEEccCCceeEEEEEEecC-CcccccC
Q 001903          287 GAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSG-GSWIKNN  365 (998)
Q Consensus       287 ~~lVLHWGV~k~~~~EW~~PP~~~~P~gSv~~~~A~ET~f~~~~~~~~~~q~veI~l~~d~~~GI~FVLk~g-~~WiKn~  365 (998)
                      ...-|||++.   .+.|..+|.               .+|.+... .+ +...+|+++..  ..|.||++++ ++|-+|+
T Consensus        21 ~~~ylHy~~~---~g~Wt~vpg---------------v~M~~~~~-~G-w~~~TI~~~~~--~~l~~~F~dG~~~WDNN~   78 (102)
T 2c3v_A           21 THPHIHYSLN---QGAWTTLPG---------------VPLTKSEX-EG-XVKVTIEAEEG--SQLRAAFNNGSGQWDNNQ   78 (102)
T ss_dssp             SSCEEEEEET---TCCBCCTTC---------------EECEECSS-TT-EEEEEECCCTT--CEEEEEEECSSSCEECGG
T ss_pred             CcEEEEEeCC---CCCcccCCC---------------cCcccccc-CC-ceEEEEecCCC--ceEEEEEeCCCcccccCC
Confidence            3577999943   378999988               33433211 12 34457777533  5899999997 7999999


Q ss_pred             CcceEEec
Q 001903          366 GENFFVGL  373 (998)
Q Consensus       366 G~DF~VpL  373 (998)
                      |.||.++-
T Consensus        79 g~Ny~~~~   86 (102)
T 2c3v_A           79 GRDYDFSS   86 (102)
T ss_dssp             GTCEEEES
T ss_pred             CcceEECC
Confidence            99999964
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A* Back     alignment and structure
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query998
d1zyma2124 N-terminal domain of enzyme I of the PEP:sugar pho 95.86
d1h6za2132 Pyruvate phosphate dikinase, central domain {Trypa 85.7
d1vbga2135 Pyruvate phosphate dikinase, central domain {Maize 84.94
d1kbla2133 Pyruvate phosphate dikinase, central domain {Clost 80.28
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Phosphohistidine domain
family: N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
domain: N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
species: Escherichia coli [TaxId: 562]

Probab=95.86  E-value=0.0027  Score=58.87  Aligned_cols=98  Identities=19%  Similarity=0.214  Sum_probs=69.6

Q ss_pred             EeecceeeeEEEEecc-hhcccccccCCCEEEEEeccCccccc---CCCcEEEeCCCCCCcccceeeeeccCceeEEEee
Q 001903          837 VISPVEVCGFITSVNE-LITLQNKVYRRPTIIIASRITGEEEI---PVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCF  912 (998)
Q Consensus       837 vIs~g~a~G~l~~v~~-L~~vq~~~~~~PtILl~~~v~GeEEI---p~gVvgVl~~~~pdvLSHlaVRARq~~V~fatc~  912 (998)
                      ..|||.+.|+++.+.. ..+.  ..+.+|+||++...+=.+-.   +.++.|+||-.- -..||.||-||..++|.+..-
T Consensus         4 ~as~G~~~G~v~~~~~~~~~~--~~~~~~~ILV~~~l~P~~~~~l~~~~v~Giit~~G-g~tSH~AIlAR~lgIP~vvg~   80 (124)
T d1zyma2           4 LASPGIAFGKALLLKEKIIDL--SAIQDEVILVAADLTPSETAQLNLKKVLGFITDAG-GRTSHTSIMARSLELPAIVGT   80 (124)
T ss_dssp             CSBCCCEEEEEEECCCCCCCG--GGCCSCEEEECSCCCHHHHHHSCGGGEEEEECSCC-CSSSHHHHHHHHHTCCEECCC
T ss_pred             CCCCeEEEEEEEEECCcHHHH--HhCCCCEEEEEccCCHHHHhhhChhheEEEEEecC-CcccHHHHHHHHcCCCEEEEc
Confidence            3689999999987643 2222  24678999999877655432   258999999553 268999999999999998865


Q ss_pred             chHHHHHHHhhcCCcEEEEEccCceEEe
Q 001903          913 DQNILRNLRLKEGKAVSIRLKSTNLIIS  940 (998)
Q Consensus       913 d~~~~~~l~~~~Gk~V~l~~ss~~v~~~  940 (998)
                      .. ..+.+  ..|+.|.+......|.+.
T Consensus        81 ~~-~~~~i--~~g~~v~vDg~~G~v~~~  105 (124)
T d1zyma2          81 GS-VTSQV--KNDDYLILDAVNNQVYVN  105 (124)
T ss_dssp             SC-HHHHC--CTTCEEEECCSSCCEEES
T ss_pred             cc-HHHHh--cCCCEEEEECCCCEEEEC
Confidence            44 23322  378888877766666554
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure