Citrus Sinensis ID: 002047
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 975 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SJF0 | 1018 | Serine/threonine-protein | yes | no | 0.997 | 0.955 | 0.877 | 0.0 | |
| Q9SHS7 | 1006 | Serine/threonine-protein | no | no | 0.993 | 0.963 | 0.900 | 0.0 | |
| Q2QM47 | 1009 | Serine/threonine-protein | yes | no | 0.996 | 0.963 | 0.851 | 0.0 | |
| Q60EX6 | 883 | Serine/threonine-protein | no | no | 0.863 | 0.953 | 0.629 | 0.0 | |
| Q8L7U5 | 881 | Serine/threonine-protein | no | no | 0.863 | 0.955 | 0.608 | 0.0 | |
| Q9LR78 | 793 | Serine/threonine-protein | no | no | 0.790 | 0.972 | 0.450 | 0.0 | |
| P48482 | 312 | Serine/threonine-protein | no | no | 0.295 | 0.923 | 0.488 | 6e-74 | |
| P48484 | 321 | Serine/threonine-protein | no | no | 0.300 | 0.912 | 0.472 | 3e-73 | |
| P22198 | 316 | Serine/threonine-protein | N/A | no | 0.294 | 0.908 | 0.481 | 4e-73 | |
| O82734 | 324 | Serine/threonine-protein | no | no | 0.299 | 0.901 | 0.472 | 7e-73 |
| >sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana GN=BSL2 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1720 bits (4454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/990 (87%), Positives = 910/990 (91%), Gaps = 17/990 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--------SGSPASTTS 47
MD DS+MV + D D + + S MERE Q+ D P +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWM 974
VVVPKLIHPLPPA+SSPETSPERHIEDTWM
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWM 989
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6 |
| >sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1719 bits (4452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/983 (90%), Positives = 923/983 (93%), Gaps = 14/983 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTS-----EESMEREQLADTEQPSGSPASTTSQSQQQPQQ 55
MD+DS+MVPE D DP EN S EE+ E++ +++E S +P+ QQQ
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPMEEKEEASEQQTGSESESASLTPSLPPPSQQQQ--- 57
Query: 56 HQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPR 115
QQQQ Q T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPR
Sbjct: 58 QQQQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPR 117
Query: 116 LILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPR 175
LILFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKWSR+TP+GEPP+PR
Sbjct: 118 LILFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPR 177
Query: 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235
AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL
Sbjct: 178 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 237
Query: 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295
VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL
Sbjct: 238 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 297
Query: 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG 355
LCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGG
Sbjct: 298 LCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGG 357
Query: 356 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVG 415
GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVG
Sbjct: 358 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVG 417
Query: 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDER 474
DLIFIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DER
Sbjct: 418 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDER 477
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
T + +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KGVE LV+ASAAEA
Sbjct: 478 TGE-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEA 535
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHH
Sbjct: 536 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHH 595
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV
Sbjct: 596 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 655
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFG
Sbjct: 656 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFG 715
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGN
Sbjct: 716 DLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGN 775
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 776 HEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 835
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 836 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 895
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 896 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 955
Query: 952 HPLPPAISSPETSPERHIEDTWM 974
HPLPPAI+SPETSPERHIEDTWM
Sbjct: 956 HPLPPAITSPETSPERHIEDTWM 978
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q2QM47|BSL2_ORYSJ Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1623 bits (4204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 836/982 (85%), Positives = 882/982 (89%), Gaps = 10/982 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS M E+D D + E + + G+P + + P
Sbjct: 1 MDVDSRMTTESDSDSDAAAQGGGGGGFGSETSSASPSAPGTPTAMGAGGGAAPIAAAAIA 60
Query: 61 TQQTPVVGP--RCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 118
+ V R AP Y+VVNA +EKKEDGPG RCGHTLTAV AVGEEG PGY+GPRLIL
Sbjct: 61 AAASAAVVAGPRPAPGYTVVNAAMEKKEDGPGCRCGHTLTAVPAVGEEGAPGYVGPRLIL 120
Query: 119 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAH 178
FGGATALEGNSA PSSAGSAGIRLAGATADVHCYDV +NKWSR+TP GEPP+PRAAH
Sbjct: 121 FGGATALEGNSATP--PSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEPPSPRAAH 178
Query: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ
Sbjct: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
Query: 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
R+L+ IGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG
Sbjct: 239 RFLLTIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
Query: 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
GRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM
Sbjct: 299 GRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
Query: 359 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
VEDSSSVAVLDTAAGVWCDTKSVVT+PRTGRYSADAAGGDA+VELTRRCRHAAAAVGD+I
Sbjct: 359 VEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDMI 418
Query: 419 FIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQ 477
++YGGLRGGVLLDDLLVAEDLAAAETT AA+ AAA AAAS++Q+ R PGRY + DE+T Q
Sbjct: 419 YVYGGLRGGVLLDDLLVAEDLAAAETTNAANQAAAIAAASDIQAGREPGRYAYNDEQTGQ 478
Query: 478 TIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAI 537
+PDG+VVLG PVA P+NGDMYTDIS ENA++QG RR++KGV+ LV+ASAAEAEAI
Sbjct: 479 PATITSPDGAVVLGTPVAAPVNGDMYTDISPENAVIQGQRRMSKGVDYLVEASAAEAEAI 538
Query: 538 SATLAAVKARQVNGEVE-LPDRDRGAEATPSGKQ---MIKPDSAGSN-SIAPAGVRLHHR 592
SATLAAVKARQVNGE E PDR++ +ATPS KQ +IKPD A SN S P GVRLHHR
Sbjct: 539 SATLAAVKARQVNGEAEHSPDREQSPDATPSVKQNASLIKPDYALSNNSTPPPGVRLHHR 598
Query: 593 AVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVI 652
AVVVAAETGGALGGMVRQLSIDQFENEGRRV YGTPESATAARKLLDRQMSINSVPKKVI
Sbjct: 599 AVVVAAETGGALGGMVRQLSIDQFENEGRRVIYGTPESATAARKLLDRQMSINSVPKKVI 658
Query: 653 AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 712
A LLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD
Sbjct: 659 ASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGD 718
Query: 713 LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772
LMRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP NVHLIRGNH
Sbjct: 719 LMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNH 778
Query: 773 EAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSIN 832
EAADINALFGFRIECIERMGERDGIW WHR+NRLFNWLPLAALIEKKIICMHGGIGRSIN
Sbjct: 779 EAADINALFGFRIECIERMGERDGIWTWHRMNRLFNWLPLAALIEKKIICMHGGIGRSIN 838
Query: 833 HVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 892
HVEQIENLQRPITMEAGS+VLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN
Sbjct: 839 HVEQIENLQRPITMEAGSVVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 898
Query: 893 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 952
NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH
Sbjct: 899 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 958
Query: 953 PLPPAISSPETSPERHIEDTWM 974
PLPPAI+SPETSPE H+EDTWM
Sbjct: 959 PLPPAITSPETSPEHHLEDTWM 980
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/904 (62%), Positives = 658/904 (72%), Gaps = 62/904 (6%)
Query: 72 APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAA 131
AP Y V +D PG RCGH+LT VA T G+ GPRLILFGGATA+E A+
Sbjct: 13 APAYREVEGWEGAGDDSPGFRCGHSLTVVAP-----TKGH-GPRLILFGGATAIEAG-AS 65
Query: 132 SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQG 191
SG P GIRLAG T VH YDV T +W+R+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 66 SGMP------GIRLAGVTNSVHSYDVDTRRWTRLHPAGEPPSPRAAHAAAAVGTMVVFQG 119
Query: 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGH M LV QRYL+ + GNDGKR
Sbjct: 120 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGAGPGPRYGHCMDLVAQRYLVTVSGNDGKR 179
Query: 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311
L+D WALDTA KPY W+KL P+G+ P MYATASAR+DG+LLLCGGRDAS +PL+ AY
Sbjct: 180 VLSDAWALDTAQKPYRWQKLNPDGDRPSARMYATASARTDGMLLLCGGRDASGMPLSDAY 239
Query: 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
GL H G+WEW +APGVSPSPRYQHAAVFV ARLHV+GG L GGR +E ++AVLDTA
Sbjct: 240 GLLMHTSGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAIEGEGAIAVLDTA 299
Query: 372 AGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
AGVW D +VTS RT + S D DA+ +L RRCRHAAA+VG I+IYGGLRG +LLD
Sbjct: 300 AGVWLDRNGIVTS-RTLKSSHDH---DASSDLLRRCRHAAASVGTQIYIYGGLRGDILLD 355
Query: 432 DLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTIPEAAPDGSVVLG 491
D LVA++ A S S + R + + R
Sbjct: 356 DFLVADN---------------APIQSEFTSSMYDRVPRAENQNR--------------- 385
Query: 492 NPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISATL-AAVKARQVN 550
N + +D T N K ++ L QASAAEAEA+SA AA +A +
Sbjct: 386 -------NHNFNSDSPTTNNSTD-----KKSIDMLTQASAAEAEAVSAVWRAAQEASHAS 433
Query: 551 GEVELPDRDRGAEATPSGKQMIKPDSAGSNSIAPAGVRLHHRAVVVAAETGGALGGMVRQ 610
E L + G+E+ S + D S+ P V+LH RAVVV+ E G LG +VRQ
Sbjct: 434 SEDSLSE-GIGSESPLSETSPMPEDLDDGGSLEP-DVKLHSRAVVVSKEAVGDLGCLVRQ 491
Query: 611 LSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFF 670
LS+DQFENE RR+ + + + A+K L+RQ S + KKVI+ LLKPR W+ P R FF
Sbjct: 492 LSLDQFENESRRMHPSSNDQSYPAKKALNRQRSPQGLHKKVISFLLKPRNWRAPAERAFF 551
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIA 730
LD E+ +LC +AE+IF EP+VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 552 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDIT 611
Query: 731 YIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIER 790
YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIER
Sbjct: 612 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 671
Query: 791 MGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850
MGE DGIWAW R N+LFN+LPLAA+IEKKIICMHGGIGRSIN +EQIE L+RPITM+ GS
Sbjct: 672 MGESDGIWAWTRFNQLFNYLPLAAMIEKKIICMHGGIGRSINTIEQIEKLERPITMDVGS 731
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
I+LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDGF
Sbjct: 732 IILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKRNRLQLIIRAHECVMDGF 791
Query: 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIE 970
ERFA G LITLFSATNYCGTANNAGAILV+GR LV+VPKLIHPLPP ++SPE+SPER ++
Sbjct: 792 ERFAHGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPVNSPESSPERAMD 851
Query: 971 DTWM 974
TWM
Sbjct: 852 ATWM 855
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/905 (60%), Positives = 637/905 (70%), Gaps = 63/905 (6%)
Query: 72 APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAA 131
AP Y + + ++D PGPRC HTLTAVAA G PRLILFGGATA+EG S++
Sbjct: 10 APQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHG------PRLILFGGATAIEGGSSS 63
Query: 132 SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQG 191
GIRLAG T VH YD+LT KW+R+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 64 V--------PGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQG 115
Query: 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251
GIGPAG S +DL+VLD+T + +WHRVVVQG GPGPRYGHVM LV QRYL+ + GNDGKR
Sbjct: 116 GIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKR 175
Query: 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311
L+D WALDTA KPY W++L P+G+ P MYA+ SARSDG+ LLCGGRD PL AY
Sbjct: 176 ALSDAWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAY 235
Query: 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
GL HR+G+WEW +APGV+PSPRYQHAAVFV ARLHVSGG L GGR+++ +SVAVLDTA
Sbjct: 236 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTA 295
Query: 372 AGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
AGVW D VTS R + D D + EL RRCRH AA+VG I+++GGLRG VLLD
Sbjct: 296 AGVWLDRNGQVTSARGSKGQIDQ---DPSFELMRRCRHGAASVGIRIYVHGGLRGDVLLD 352
Query: 432 DLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTIPEAAPDGSVVLG 491
D LVAE+ + S++ S L +RT+Q+ + P S
Sbjct: 353 DFLVAEN---------------STFQSDISSPL-----LASDRTQQS---STPRFSYAAR 389
Query: 492 NPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISATLAAVKARQVNG 551
P + M +S + L+ + + + A+ + TL
Sbjct: 390 PPSGSEPSFSMSEGLSLDENSLEKLTEASAAEAEVASSVWRAAQLGAGTL---------- 439
Query: 552 EVELPDRDRGAEATPSGKQMIKP--DSAGSNSIAPAGVRLHHRAVVVAAETGGALGGMVR 609
+ PS P +S + VRLH RAVVVA ET G+LGGMVR
Sbjct: 440 -----------DEEPSTSDASSPIVESTTDGTANEGDVRLHPRAVVVAKETVGSLGGMVR 488
Query: 610 QLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQF 669
QLS+DQF+NE RR+ K RQ S + KKVIA LL+PR WKPP R+F
Sbjct: 489 QLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHKKVIAALLRPRNWKPPGNRKF 548
Query: 670 FLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI 729
FLD E+ +LC +AE+IF E +VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 549 FLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDI 608
Query: 730 AYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIE 789
YIDYLFLGDYVDRGQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIE
Sbjct: 609 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIE 668
Query: 790 RMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAG 849
RMGE DGIWAW R N+LFN+LPLAALIE KIICMHGGIGRSI+ VEQIE ++RPITM+AG
Sbjct: 669 RMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGRSISTVEQIEKIERPITMDAG 728
Query: 850 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDG 909
S+VLMDLLWSDPTENDS+EGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDG
Sbjct: 729 SLVLMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDG 788
Query: 910 FERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHI 969
FERFAQG LITLFSATNYCGTANNAGAILV+GR LV+VPKLIHPLPP I SPE SPE
Sbjct: 789 FERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPILSPENSPEHSG 848
Query: 970 EDTWM 974
+D WM
Sbjct: 849 DDAWM 853
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/915 (45%), Positives = 529/915 (57%), Gaps = 144/915 (15%)
Query: 60 QTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILF 119
Q+ Q P +P+Y + + ED PGPRCGHTLTAV +LILF
Sbjct: 5 QSYQYP------SPSYESIQTFYDTDEDWPGPRCGHTLTAVFVNNSH--------QLILF 50
Query: 120 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHV 179
GG+T N +S P I L G T VH +DVLT KW+R+ P G+ P+PRA H
Sbjct: 51 GGSTTAVANHNSS-LPE------ISLDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHA 103
Query: 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
A GT+++IQGGIGP+G S D+++LD+T + W + +V G P PRYGHVM + QR
Sbjct: 104 AALYGTLILIQGGIGPSGPSDGDVYMLDMTNNK--WIKFLVGGETPSPRYGHVMDIAAQR 161
Query: 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299
+L+ GN+G L D WALDT P+ W +L P G P MYA+ S+R DG+ LLCGG
Sbjct: 162 WLVIFSGNNGNEILDDTWALDTRG-PFSWDRLNPSGNQPSGRMYASGSSREDGIFLLCGG 220
Query: 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359
D S V L YGL D W P V+PSPRYQH AVF ++LHV GG L R++
Sbjct: 221 IDHSGVTLGDTYGLKMDSDNVW--TPVPAVAPSPRYQHTAVFGGSKLHVIGGILNRARLI 278
Query: 360 EDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419
+ + VAVLDT G W DT P T SA A +L RRC HAAA+ G ++
Sbjct: 279 DGEAVVAVLDTETGEWVDTNQ----PET---SASGANRQNQYQLMRRCHHAAASFGSHLY 331
Query: 420 IYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTI 479
++ GG+ D LL +DL V E ++ +
Sbjct: 332 VH----GGIREDVLL--DDL------------------------------LVAETSQSSS 355
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PE D NP +N ML L + + ++E EA S
Sbjct: 356 PEPEED------NP---------------DNYML-----LDDYLMDEPKPLSSEPEASSF 389
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGKQMIKPDSAGSNSIAPAGVRLHHRAVVVAAE 599
+ + E+ + DR AEA + ++A +S V L H AE
Sbjct: 390 IMRSTS------EIAM---DRLAEA----HNLPTIENAFYDSAIEGYVPLQH-----GAE 431
Query: 600 TGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPR 659
T G GG+VR S+DQ S + KKVI+ LL+P+
Sbjct: 432 TVGNRGGLVRTASLDQ---------------------------STQDLHKKVISTLLRPK 464
Query: 660 GWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDE 719
W PP R FFL E+ LCD E+IF +EP++LQLK PIK+FGD+HGQ+GDLMRLF E
Sbjct: 465 TWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKVFGDIHGQYGDLMRLFHE 524
Query: 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINA 779
YG PS GDI +IDYLFLGDYVDRGQHSLE I LL ALK+EYP N+HLIRGNHE+ +N
Sbjct: 525 YGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYPKNIHLIRGNHESLAMNR 584
Query: 780 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIEN 839
++GF EC ERMGE G AW +IN++F++LPLAAL+EKK++C+HGGIGR++ +E+IEN
Sbjct: 585 IYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLCVHGGIGRAVT-IEEIEN 643
Query: 840 LQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
++RP + GS+VL D+LWSDPT ND+V G+ NARG G+V+FGPD V F N L++I
Sbjct: 644 IERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSFGPDIVKAFLERNGLEMI 703
Query: 900 VRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAIS 959
+RAHECV+DGFERFA G LIT+FSATNYCGTA NAGAILV+GRD+V+ PKLIHP PP IS
Sbjct: 704 LRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGRDMVIYPKLIHPHPPPIS 763
Query: 960 SPETSPERHIEDTWM 974
S E E + + WM
Sbjct: 764 SSE---EDYTDKAWM 775
|
Phosphatase that acts as a positive regulator of brassinolide signaling. Dephosphorylates BES1, a transcription factor that regulates the expression of brassinolide-response genes, thereby playing an important role in the regulation of response to brassinosteroids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48482|PP12_ARATH Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 280 bits (715), Expect = 6e-74, Method: Composition-based stats.
Identities = 148/303 (48%), Positives = 198/303 (65%), Gaps = 15/303 (4%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R KP + Q L+ +EI LC + IF +P++L+L+APIKI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKPGTK-QAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P TA +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFSVR----LWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +VEQI+N++RP T S +L DLLWSDP+++ V+G N RG TFGPD+V EF
Sbjct: 186 LTNVEQIKNIKRP-TDVPDSGLLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAEF 241
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
ND+ LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 242 LIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI 301
Query: 951 IHP 953
+ P
Sbjct: 302 LKP 304
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats.
Identities = 146/309 (47%), Positives = 200/309 (64%), Gaps = 16/309 (5%)
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
++V +I L + R +P +Q L EI LC +A IF +P++L+L+APIKI G
Sbjct: 16 SAVLDDIIRRLTEVRLARPG--KQVQLSEAEIKQLCTTARDIFLQQPNLLELEAPIKICG 73
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
D+HGQ+ DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K++YP N
Sbjct: 74 DIHGQYSDLLRLFEYGGFPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPGN 127
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
L+RGNHE A IN ++GF EC R R W FN LP+AALI+ KI+CMH
Sbjct: 128 FFLLRGNHECASINRIYGFYDECKRRFNVR----VWKVFTDCFNCLPVAALIDDKILCMH 183
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GG+ ++H+++I NL RP TM + +L DLLWSDP ++ V+G N RG TFGP
Sbjct: 184 GGLSPDLDHLDEIRNLPRP-TMIPDTGLLCDLLWSDPGKD--VKGWGMNDRGVSY-TFGP 239
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
D+V EF +DL L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + +L
Sbjct: 240 DKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENL 299
Query: 945 VVVPKLIHP 953
+ +++ P
Sbjct: 300 MCSFQILKP 308
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P22198|PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats.
Identities = 146/303 (48%), Positives = 193/303 (63%), Gaps = 16/303 (5%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
VI LL+ + KP Q L +EI LC +A+ IF +P++L+L+APIKI GD+HGQ+
Sbjct: 9 VIRRLLEVKNLKPGKNAQ--LSESEIKQLCAAAKEIFLQQPNLLELEAPIKICGDVHGQY 66
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLFD G P A +YLFLGDYVDRG+ SLETI LLLA KV+YP N L+RG
Sbjct: 67 SDLLRLFDYGGYPPQA------NYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRG 120
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A +N ++GF EC R + W FN LP++ALI++KI+CMHGG+
Sbjct: 121 NHECASVNRIYGFYDECKRRFSVK----LWKTFTDCFNCLPVSALIDEKILCMHGGLSPE 176
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+N +EQI NL RP + + L DLLWSDP+ + G N RG TFGPD+V EF
Sbjct: 177 LNKLEQILNLNRPTDVPDTGL-LCDLLWSDPS--NEATGWAINDRGVSF-TFGPDKVSEF 232
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+DL LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 233 LEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQI 292
Query: 951 IHP 953
+ P
Sbjct: 293 LKP 295
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|O82734|PP18_ARATH Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 7e-73, Method: Composition-based stats.
Identities = 147/311 (47%), Positives = 200/311 (64%), Gaps = 19/311 (6%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ +G K Q L +EI LC +A +IF S+P++L L API+I GD+HGQ+
Sbjct: 17 IIRRLLEGKGGK-----QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQY 71
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K+ YP+ ++L+RG
Sbjct: 72 QDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRG 125
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AALI++KI+CMHGG+
Sbjct: 126 NHEDAKINRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDEKILCMHGGLSPD 181
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
++++ QI +QRPI + S +L DLLWSDP + +EG + RG TFG D+V EF
Sbjct: 182 LDNLNQIREIQRPIEI-PDSGLLCDLLWSDP--DQKIEGWADSDRGIS-CTFGADKVAEF 237
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ NDL LI R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV ++
Sbjct: 238 LDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEI 297
Query: 951 IHPLPPAISSP 961
+ P P + S P
Sbjct: 298 MKPAPASSSHP 308
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 975 | ||||||
| 225462440 | 1006 | PREDICTED: serine/threonine-protein phos | 0.995 | 0.965 | 0.935 | 0.0 | |
| 449444819 | 1002 | PREDICTED: serine/threonine-protein phos | 0.994 | 0.968 | 0.911 | 0.0 | |
| 356550064 | 988 | PREDICTED: serine/threonine-protein phos | 0.977 | 0.964 | 0.902 | 0.0 | |
| 356544772 | 1001 | PREDICTED: serine/threonine-protein phos | 0.988 | 0.963 | 0.905 | 0.0 | |
| 15223207 | 1018 | serine/threonine-protein phosphatase BSL | 0.997 | 0.955 | 0.877 | 0.0 | |
| 395133376 | 999 | Ser/Thr phosphatase-containing Kelch rep | 0.990 | 0.966 | 0.902 | 0.0 | |
| 42569377 | 1006 | serine/threonine-protein phosphatase BSL | 0.993 | 0.963 | 0.900 | 0.0 | |
| 222423388 | 1018 | AT1G08420 [Arabidopsis thaliana] | 0.997 | 0.955 | 0.877 | 0.0 | |
| 356539201 | 1010 | PREDICTED: serine/threonine-protein phos | 0.992 | 0.958 | 0.910 | 0.0 | |
| 297843622 | 1017 | kelch repeat-containing protein [Arabido | 0.997 | 0.956 | 0.879 | 0.0 |
| >gi|225462440|ref|XP_002264614.1| PREDICTED: serine/threonine-protein phosphatase BSL3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 918/981 (93%), Positives = 940/981 (95%), Gaps = 10/981 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQ 58
MDVDS+MVPE D DP+ + SMEREQ + S A +QQQ QQ QQ
Sbjct: 1 MDVDSSMVPETDQDPSTPNHGAPSISASMEREQQLGAAEQS---APAQPPAQQQQQQQQQ 57
Query: 59 QQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 118
Q QQ+PV GPR APTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL
Sbjct: 58 AQVQQSPVAGPRHAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLIL 117
Query: 119 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAH 178
FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV+TNKWSRITPFGEPPTPRAAH
Sbjct: 118 FGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVITNKWSRITPFGEPPTPRAAH 177
Query: 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238
VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ
Sbjct: 178 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 237
Query: 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298
RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG
Sbjct: 238 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 297
Query: 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
GRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM
Sbjct: 298 GRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 357
Query: 359 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
VEDSSSVAVLDTAAGVWCDTKSVVTSPRTG+YSADAAGGDAAVELTRRCRHAAAAVGDLI
Sbjct: 358 VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGKYSADAAGGDAAVELTRRCRHAAAAVGDLI 417
Query: 419 FIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQ 477
FIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAASN+Q+ RLPGRYGF+DERTRQ
Sbjct: 418 FIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAASNLQAGRLPGRYGFIDERTRQ 477
Query: 478 TIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAI 537
TIPEAAPDGSVVLG PVAPP+NGDMYTDISTENAMLQG+RRL+KGVE LV+ASAAEAEAI
Sbjct: 478 TIPEAAPDGSVVLGTPVAPPVNGDMYTDISTENAMLQGSRRLSKGVEYLVEASAAEAEAI 537
Query: 538 SATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIK-PDSAGSNSIAPAGVRLHHRA 593
SATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IK PDSAGSN+IAPAGVRLHHRA
Sbjct: 538 SATLAAAKARQVNGEVELPDRDRGAEATPSGKQISTLIKMPDSAGSNNIAPAGVRLHHRA 597
Query: 594 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA
Sbjct: 598 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 657
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQ+KAP+KIFGDLHGQFGDL
Sbjct: 658 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQIKAPVKIFGDLHGQFGDL 717
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP NVHLIRGNHE
Sbjct: 718 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNHE 777
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 778 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 837
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 838 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 897
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 898 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 957
Query: 954 LPPAISSPETSPERHIEDTWM 974
LPPAISSPETSPERH+EDTWM
Sbjct: 958 LPPAISSPETSPERHLEDTWM 978
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444819|ref|XP_004140171.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1747 bits (4525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/978 (91%), Positives = 920/978 (94%), Gaps = 8/978 (0%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
M+VDS+MVPE DHDPAV+ +T + D EQP T+ QS PQQ Q
Sbjct: 1 MEVDSSMVPEPDHDPAVQNHSTVSSTAAG---VDREQPQAG-GGTSPQSMSLPQQQQTTV 56
Query: 61 TQQTPVV-GPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILF 119
Q V GPR AP YSVVNA+I+KKEDGPGPRCGHTLTAV +VGEEGTPGYIGPRLILF
Sbjct: 57 QMQQTTVVGPRLAPAYSVVNAIIDKKEDGPGPRCGHTLTAVGSVGEEGTPGYIGPRLILF 116
Query: 120 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHV 179
GGATALEGNSAASGTPSSAGSAGIRLAGATADVHC+DVL NKWSRITP GEPPTPRAAHV
Sbjct: 117 GGATALEGNSAASGTPSSAGSAGIRLAGATADVHCFDVLANKWSRITPLGEPPTPRAAHV 176
Query: 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR
Sbjct: 177 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 236
Query: 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299
YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG
Sbjct: 237 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 296
Query: 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359
RDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV
Sbjct: 297 RDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 356
Query: 360 EDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419
EDSSSVAVLDTAAGVWCD KSVVT+PRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIF
Sbjct: 357 EDSSSVAVLDTAAGVWCDIKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIF 416
Query: 420 IYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDERTRQTI 479
IYGGLRGGVLLDDLLVAED+AAAETT+AASHAAAAAAAS RLP RYGF DER RQT+
Sbjct: 417 IYGGLRGGVLLDDLLVAEDMAAAETTSAASHAAAAAAASVQPGRLPPRYGFTDERARQTM 476
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PEAAPDGSVVLGNPVAPP+NGDMYTDISTENAMLQG RR++KGVE LV+ASAAEAEAISA
Sbjct: 477 PEAAPDGSVVLGNPVAPPVNGDMYTDISTENAMLQGQRRMSKGVEYLVEASAAEAEAISA 536
Query: 540 TLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRAVVV 596
T AA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDS GSNSIAPAGVRLHHRAVVV
Sbjct: 537 TFAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSTGSNSIAPAGVRLHHRAVVV 596
Query: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLL 656
AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSINSVPKKVIAHLL
Sbjct: 597 AAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLL 656
Query: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
KPRGWKPPVRRQFFLDCNEIADLCDSAE+IFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL
Sbjct: 657 KPRGWKPPVRRQFFLDCNEIADLCDSAEKIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRL 716
Query: 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
FDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY NVHLIRGNHEAAD
Sbjct: 717 FDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYQQNVHLIRGNHEAAD 776
Query: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQ 836
INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV+Q
Sbjct: 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVQQ 836
Query: 837 IENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
IEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL
Sbjct: 837 IENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDL 896
Query: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP
Sbjct: 897 QLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956
Query: 957 AISSPETSPERHIEDTWM 974
A++SPE SPERH+EDTWM
Sbjct: 957 AMTSPEASPERHLEDTWM 974
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550064|ref|XP_003543410.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1727 bits (4474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/981 (90%), Positives = 913/981 (93%), Gaps = 28/981 (2%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESM---EREQLADTEQPSGSPASTTSQSQQQPQQHQ 57
MDVDS+MVPE DHDPA + + + E EQLA E PS S + PQ
Sbjct: 1 MDVDSSMVPETDHDPAAQNHAAAAPAPDAAEGEQLA--EPPSSGDGSPEQAAASAPQ--- 55
Query: 58 QQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLI 117
+PVVGPR APTY+VVNA++EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLI
Sbjct: 56 ------SPVVGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLI 109
Query: 118 LFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAA 177
LFGGATALEGNSAASGTPSSAG+AGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAA
Sbjct: 110 LFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAA 169
Query: 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237
HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQ PRWHRV VQGPGPGPRYGHVMALVG
Sbjct: 170 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVG 229
Query: 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297
QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC
Sbjct: 230 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 289
Query: 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR 357
GGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR
Sbjct: 290 GGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR 349
Query: 358 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 417
MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL
Sbjct: 350 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 409
Query: 418 IFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTR 476
IFIYGGLRGGVLLDDLLVAEDLAAAETT AASNVQ+ RLP RYGF D+RTR
Sbjct: 410 IFIYGGLRGGVLLDDLLVAEDLAAAETT----------AASNVQAGRLPERYGFADDRTR 459
Query: 477 QTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEA 536
+T+PEAA DGSVVLGNPVAPP+NGD+YTDISTENAMLQG RR +GVE LV+ASAAEAEA
Sbjct: 460 ETMPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTARGVEYLVEASAAEAEA 519
Query: 537 ISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRA 593
ISA LAA KARQ NGEVELPDRDRGAEATPSGK+ +IKPDSAGSN+I P GVRLHHRA
Sbjct: 520 ISAALAAAKARQENGEVELPDRDRGAEATPSGKETSSLIKPDSAGSNNITPGGVRLHHRA 579
Query: 594 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
VVVAAETGGALGGMVRQLSIDQFENEGRRV YGTPE+ATAARKLLDRQMSINSVPKKVIA
Sbjct: 580 VVVAAETGGALGGMVRQLSIDQFENEGRRVGYGTPENATAARKLLDRQMSINSVPKKVIA 639
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDLHGQFGDL
Sbjct: 640 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDL 699
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE
Sbjct: 700 MRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 759
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIW WHRIN+LFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 760 AADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINH 819
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIEN+QRPI MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 820 VEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 879
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 880 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 939
Query: 954 LPPAISSPETSPERHIEDTWM 974
LPPAISSPETSPERHIEDTWM
Sbjct: 940 LPPAISSPETSPERHIEDTWM 960
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544772|ref|XP_003540821.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1721 bits (4458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/983 (90%), Positives = 922/983 (93%), Gaps = 19/983 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQP-----SGSPASTTSQSQQQPQQ 55
MDVDS+MVPE DHDP V+ ER+QL ++ P GSPA Q QQP
Sbjct: 1 MDVDSSMVPEPDHDPPVQNH------AERDQLGESPSPPPSEGGGSPA----QPHQQPLP 50
Query: 56 HQQQQTQQ-TPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP 114
Q QQ P+VGPR APTYSVVNA++EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP
Sbjct: 51 PTAAQVQQPNPLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGP 110
Query: 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTP 174
RLILFGGATALEGNSA SGTPSSAG+AGIRLAGATAD+HCYDV+TNKWSRITP GEPP+
Sbjct: 111 RLILFGGATALEGNSAVSGTPSSAGNAGIRLAGATADIHCYDVITNKWSRITPIGEPPSS 170
Query: 175 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234
RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV V GPGPGPRYGHVMA
Sbjct: 171 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMA 230
Query: 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294
LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL
Sbjct: 231 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 290
Query: 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 354
LLCGGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG
Sbjct: 291 LLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 350
Query: 355 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414
GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAA+
Sbjct: 351 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAI 410
Query: 415 GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRYGFVDER 474
GDLIFIYGGLRGGVLLDDLLVAEDLAAAETT A+ AAAAAA++ RLPGRYGF+D+R
Sbjct: 411 GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASHAAAAAAASNVQAGRLPGRYGFIDDR 470
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
TRQT+PE PDGSVVLGNPVAPP+NGDMYTDISTENA+L G+RR +KGVE LV+ASAAEA
Sbjct: 471 TRQTMPETDPDGSVVLGNPVAPPVNGDMYTDISTENALLPGSRRTSKGVEYLVEASAAEA 530
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDSAGSNSI P GVRLHH
Sbjct: 531 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHH 590
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPES TAARKLLDRQMSINSVPKKV
Sbjct: 591 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESTTAARKLLDRQMSINSVPKKV 650
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDLHGQFG
Sbjct: 651 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFG 710
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETI+LLLALKVEYPNNVHLIRGN
Sbjct: 711 DLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGN 770
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 771 HEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 830
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 831 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 890
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 891 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 950
Query: 952 HPLPPAISSPETSPERHIEDTWM 974
HPLPPAISSPETSPERHIEDTWM
Sbjct: 951 HPLPPAISSPETSPERHIEDTWM 973
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15223207|ref|NP_172318.1| serine/threonine-protein phosphatase BSL2 [Arabidopsis thaliana] gi|160359046|sp|Q9SJF0.2|BSL2_ARATH RecName: Full=Serine/threonine-protein phosphatase BSL2; AltName: Full=BSU1-like protein 2 gi|332190166|gb|AEE28287.1| serine/threonine-protein phosphatase BSL2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1720 bits (4454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/990 (87%), Positives = 910/990 (91%), Gaps = 17/990 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--------SGSPASTTS 47
MD DS+MV + D D + + S MERE Q+ D P +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWM 974
VVVPKLIHPLPPA+SSPETSPERHIEDTWM
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWM 989
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395133376|gb|AFN44701.1| Ser/Thr phosphatase-containing Kelch repeat domain protein [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1719 bits (4452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 884/979 (90%), Positives = 909/979 (92%), Gaps = 13/979 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS M E+DH EN S EQL GSP T QQ QQQ
Sbjct: 1 MDVDSTMSSESDH-----AENKGASS---EQLNGQSSAGGSPPETPKDEQQPATSQPQQQ 52
Query: 61 TQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFG 120
TPVVGPRCAPTYSVV+AV+EKKEDGPGPRCGHTLTAV AVGEEG+P YIGPRLILFG
Sbjct: 53 QGSTPVVGPRCAPTYSVVHAVMEKKEDGPGPRCGHTLTAVPAVGEEGSPNYIGPRLILFG 112
Query: 121 GATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVA 180
GATALEGNSA SGTPSSAGSAGIRLAGATADVHCYDVLTNKWSR+TP GEPPTPRAAHVA
Sbjct: 113 GATALEGNSAGSGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRMTPIGEPPTPRAAHVA 172
Query: 181 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240
TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY
Sbjct: 173 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 232
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR
Sbjct: 233 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 292
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
DA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVE
Sbjct: 293 DANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVE 352
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DSSS+AVLDTAAGVWCDT SVVTSPRTGR+SADAAGGDAAVELTRRCRHAA AVGDLIFI
Sbjct: 353 DSSSIAVLDTAAGVWCDTTSVVTSPRTGRFSADAAGGDAAVELTRRCRHAAVAVGDLIFI 412
Query: 421 YGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYGFVDERTRQTI 479
YGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA NVQ+ RL GRYGF DERTRQT
Sbjct: 413 YGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAAVNVQAGRLTGRYGFGDERTRQTD 472
Query: 480 PEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEAEAISA 539
PEA DGSVVLG PVAPP+NGDMY+DIS+ENA QG RRL KGVE LV+ASAAEAEAI+A
Sbjct: 473 PEAVNDGSVVLGTPVAPPVNGDMYSDISSENATFQGPRRLIKGVEYLVEASAAEAEAITA 532
Query: 540 TLAAVKARQV-NGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAGVRLHHRAVV 595
TLAA KARQ NGEVELPDRDRGAEATPSGKQ +IKPD A SN+ APAGVRLHHRAVV
Sbjct: 533 TLAAAKARQQGNGEVELPDRDRGAEATPSGKQASTLIKPDFALSNNSAPAGVRLHHRAVV 592
Query: 596 VAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHL 655
+AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSINSVPKKVI HL
Sbjct: 593 IAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVITHL 652
Query: 656 LKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMR 715
LKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEPSV+QLKAPIKIFGDLHGQFGDLMR
Sbjct: 653 LKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPSVIQLKAPIKIFGDLHGQFGDLMR 712
Query: 716 LFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775
LFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLET+TLLLALKVEYP NVHLIRGNHEAA
Sbjct: 713 LFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETMTLLLALKVEYPLNVHLIRGNHEAA 772
Query: 776 DINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVE 835
DINALFGFRIECIERMGERDGIWAWHR NRLFNWLPLAALIEKKIICMHGGIGRSINHVE
Sbjct: 773 DINALFGFRIECIERMGERDGIWAWHRFNRLFNWLPLAALIEKKIICMHGGIGRSINHVE 832
Query: 836 QIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND 895
QIEN+QRPITM+AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND
Sbjct: 833 QIENIQRPITMDAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNND 892
Query: 896 LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955
LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP
Sbjct: 893 LQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 952
Query: 956 PAISSPETSPERHIEDTWM 974
PAISSPETSPERHIEDTWM
Sbjct: 953 PAISSPETSPERHIEDTWM 971
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42569377|ref|NP_180289.3| serine/threonine-protein phosphatase BSL3 [Arabidopsis thaliana] gi|160359047|sp|Q9SHS7.2|BSL3_ARATH RecName: Full=Serine/threonine-protein phosphatase BSL3; AltName: Full=BSU1-like protein 3 gi|330252859|gb|AEC07953.1| serine/threonine-protein phosphatase BSL3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1719 bits (4452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/983 (90%), Positives = 923/983 (93%), Gaps = 14/983 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKENTS-----EESMEREQLADTEQPSGSPASTTSQSQQQPQQ 55
MD+DS+MVPE D DP EN S EE+ E++ +++E S +P+ QQQ
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPMEEKEEASEQQTGSESESASLTPSLPPPSQQQQ--- 57
Query: 56 HQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPR 115
QQQQ Q T VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPR
Sbjct: 58 QQQQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPR 117
Query: 116 LILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPR 175
LILFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKWSR+TP+GEPP+PR
Sbjct: 118 LILFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPR 177
Query: 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 235
AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL
Sbjct: 178 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL 237
Query: 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295
VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL
Sbjct: 238 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 297
Query: 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGG 355
LCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGG
Sbjct: 298 LCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGG 357
Query: 356 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVG 415
GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVG
Sbjct: 358 GRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVG 417
Query: 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ-SRLPGRYGFVDER 474
DLIFIYGGLRGGVLLDDLLVAEDLAAAETT+AASHAAAAAAA+N R PGRYGF DER
Sbjct: 418 DLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDER 477
Query: 475 TRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQASAAEA 534
T + +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KGVE LV+ASAAEA
Sbjct: 478 TGE-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEA 535
Query: 535 EAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHH 591
EAISATLAA KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHH
Sbjct: 536 EAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHH 595
Query: 592 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 651
RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV
Sbjct: 596 RAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV 655
Query: 652 IAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFG 711
+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFG
Sbjct: 656 VAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFG 715
Query: 712 DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771
DLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGN
Sbjct: 716 DLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGN 775
Query: 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 831
HEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSI
Sbjct: 776 HEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSI 835
Query: 832 NHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 891
NHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC
Sbjct: 836 NHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFC 895
Query: 892 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 951
NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI
Sbjct: 896 NNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLI 955
Query: 952 HPLPPAISSPETSPERHIEDTWM 974
HPLPPAI+SPETSPERHIEDTWM
Sbjct: 956 HPLPPAITSPETSPERHIEDTWM 978
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222423388|dbj|BAH19666.1| AT1G08420 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1719 bits (4451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/990 (87%), Positives = 910/990 (91%), Gaps = 17/990 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQP--------SGSPASTTS 47
MD DS+MV + D D + + S MERE Q+ D P +
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQVNDQSPPPEGGSVPTPPPSDPNPA 60
Query: 48 QSQQQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEG 107
SQQQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EG
Sbjct: 61 TSQQQAAAVVGQEQQPALVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEG 120
Query: 108 TPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167
TPGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TP
Sbjct: 121 TPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTP 180
Query: 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP
Sbjct: 181 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 240
Query: 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 287
RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS
Sbjct: 241 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS 300
Query: 288 ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLH 347
ARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLH
Sbjct: 301 ARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLH 360
Query: 348 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRC 407
VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRC
Sbjct: 361 VSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420
Query: 408 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGR 467
RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGR
Sbjct: 421 RHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGR 480
Query: 468 YGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLV 527
YGF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KGVE LV
Sbjct: 481 YGFSDERNRE-LSESAADGAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLV 539
Query: 528 QASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAP 584
+ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ P
Sbjct: 540 EASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTP 599
Query: 585 AGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 644
AG+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI
Sbjct: 600 AGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSI 659
Query: 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFG 704
NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFG
Sbjct: 660 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFG 719
Query: 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764
DLHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +N
Sbjct: 720 DLHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHN 779
Query: 765 VHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMH 824
VHLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMH
Sbjct: 780 VHLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMH 839
Query: 825 GGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 884
GGIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP
Sbjct: 840 GGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGP 899
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL
Sbjct: 900 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959
Query: 945 VVVPKLIHPLPPAISSPETSPERHIEDTWM 974
VVVPKLIHPLPPA+SSPETSPERHIEDTWM
Sbjct: 960 VVVPKLIHPLPPALSSPETSPERHIEDTWM 989
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539201|ref|XP_003538088.1| PREDICTED: serine/threonine-protein phosphatase BSL2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1717 bits (4447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 900/988 (91%), Positives = 930/988 (94%), Gaps = 20/988 (2%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEQPSGSPASTTSQSQQQPQQHQQQQ 60
MDVDS+MVPE DHDP V+ ER+QL D+ PS S + QQ QQQQ
Sbjct: 1 MDVDSSMVPEPDHDPPVQNH------AERDQLGDSPSPSLSEGGGSLAQSPPQQQQQQQQ 54
Query: 61 T----------QQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPG 110
Q +VGPR APTYSVVNA++EKKEDGPGPRCGHTLTAVAAVGEEGT G
Sbjct: 55 QPPPATAAQVHQPNSLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSG 114
Query: 111 YIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGE 170
YIGPRLILFGGATALEGNSAASGTPSSAG+AGIRLAGATADVHCYDV++NKWSRITP GE
Sbjct: 115 YIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVISNKWSRITPIGE 174
Query: 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230
PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV V GPGPGPRYG
Sbjct: 175 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYG 234
Query: 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290
HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS
Sbjct: 235 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 294
Query: 291 DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350
DGLLLLCGGRDA+SVPL+SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG
Sbjct: 295 DGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 354
Query: 351 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA 410
GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA
Sbjct: 355 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHA 414
Query: 411 AAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQS-RLPGRYG 469
AAA+GDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQ+ RLPGRYG
Sbjct: 415 AAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGRLPGRYG 474
Query: 470 FVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQA 529
F+D+RTRQT+PEAA DGSVVLGNPVAPP+NGDMYTDISTENA+L GTRR +KGVE LV+A
Sbjct: 475 FIDDRTRQTMPEAASDGSVVLGNPVAPPVNGDMYTDISTENALLPGTRRTSKGVEYLVEA 534
Query: 530 SAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQ---MIKPDSAGSNSIAPAG 586
SAAEAEAISATLAA KARQVNGEVELPDRDRGAEATPSGKQ +IKPDSAGSNSI P G
Sbjct: 535 SAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGG 594
Query: 587 VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS 646
VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS
Sbjct: 595 VRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINS 654
Query: 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDL 706
VPKKV+AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL+APIKIFGDL
Sbjct: 655 VPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDL 714
Query: 707 HGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVH 766
HGQFGDLMRLF+EYG+PSTAGDIAYIDYLFLGDYVDRGQHSLETI+LLLALKVEYPNNVH
Sbjct: 715 HGQFGDLMRLFEEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVH 774
Query: 767 LIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826
LIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGG
Sbjct: 775 LIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGG 834
Query: 827 IGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886
IGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR
Sbjct: 835 IGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 894
Query: 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV 946
VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV
Sbjct: 895 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVV 954
Query: 947 VPKLIHPLPPAISSPETSPERHIEDTWM 974
VPKLIHPLPPAISSP+TSPERHIEDTWM
Sbjct: 955 VPKLIHPLPPAISSPDTSPERHIEDTWM 982
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297843622|ref|XP_002889692.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335534|gb|EFH65951.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1717 bits (4447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/989 (87%), Positives = 909/989 (91%), Gaps = 16/989 (1%)
Query: 1 MDVDSNMVPEADHDPAVEKEN--TSEESMERE---QLADTEQPSGSPASTTSQSQ----- 50
MD DS+MV + D D + + S MERE Q+ D P G T S
Sbjct: 1 MDEDSSMVADNDQDREFQSLDGGQSPSPMERETPQQMNDQSPPEGGSVPTPPPSDPNPTS 60
Query: 51 --QQPQQHQQQQTQQTPVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGT 108
QQ Q+ Q VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EGT
Sbjct: 61 SPQQAAAVVGQEQQPAQVVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGT 120
Query: 109 PGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168
PGYIGPRL+LFGGATALEGNS +GTP+SAGSAGIRLAGATADVHCYDVL+NKW+R+TPF
Sbjct: 121 PGYIGPRLVLFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPF 180
Query: 169 GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228
GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR
Sbjct: 181 GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 240
Query: 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA 288
YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA
Sbjct: 241 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA 300
Query: 289 RSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348
RSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHV
Sbjct: 301 RSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHV 360
Query: 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCR 408
SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCR
Sbjct: 361 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCR 420
Query: 409 HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQSRLPGRY 468
HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETT AASHAAAAAA ++ RLPGRY
Sbjct: 421 HAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRY 480
Query: 469 GFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGVESLVQ 528
GF DER R+ + E+A DG+VVLG+PVAPP+NGDM+TDIS ENA L GTRR KGVE LV+
Sbjct: 481 GFSDERNRE-LSESATDGAVVLGSPVAPPVNGDMHTDISPENAFLPGTRRTNKGVEYLVE 539
Query: 529 ASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPA 585
ASAAEAEAISATLAA KARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ PA
Sbjct: 540 ASAAEAEAISATLAAAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPA 599
Query: 586 GVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 645
G+RLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN
Sbjct: 600 GIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 659
Query: 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 705
SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFGD
Sbjct: 660 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGD 719
Query: 706 LHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765
LHGQFGDLMRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +NV
Sbjct: 720 LHGQFGDLMRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNV 779
Query: 766 HLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825
HLIRGNHEAADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMHG
Sbjct: 780 HLIRGNHEAADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHG 839
Query: 826 GIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885
GIGRSINHVEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD
Sbjct: 840 GIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 899
Query: 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV
Sbjct: 900 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 959
Query: 946 VVPKLIHPLPPAISSPETSPERHIEDTWM 974
VVPKLIHPLPPA+SSPETSPERHIEDTWM
Sbjct: 960 VVPKLIHPLPPALSSPETSPERHIEDTWM 988
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 975 | ||||||
| TAIR|locus:2059610 | 1006 | BSL3 "BRI1 suppressor 1 (BSU1) | 0.995 | 0.965 | 0.821 | 0.0 | |
| TAIR|locus:2201776 | 1018 | BSL2 "BRI1 suppressor 1 (BSU1) | 0.931 | 0.891 | 0.857 | 0.0 | |
| TAIR|locus:2139399 | 881 | BSL1 "BRI1 suppressor 1 (BSU1) | 0.419 | 0.464 | 0.737 | 3.1e-278 | |
| TAIR|locus:2825042 | 793 | BSU1 "BRI1 SUPPRESSOR 1" [Arab | 0.336 | 0.413 | 0.629 | 6.5e-196 | |
| GENEDB_PFALCIPARUM|PF14_0630 | 889 | PF14_0630 "protein serine/thre | 0.242 | 0.265 | 0.558 | 3.1e-112 | |
| UNIPROTKB|Q8IKH5 | 889 | PF14_0630 "Serine/threonine-pr | 0.242 | 0.265 | 0.558 | 3.1e-112 | |
| TAIR|locus:2168484 | 312 | TOPP2 "AT5G59160" [Arabidopsis | 0.295 | 0.923 | 0.488 | 4.4e-68 | |
| TAIR|locus:2063942 | 321 | TOPP4 "type one serine/threoni | 0.305 | 0.928 | 0.473 | 1.9e-67 | |
| TAIR|locus:2180330 | 324 | TOPP8 "AT5G27840" [Arabidopsis | 0.299 | 0.901 | 0.469 | 1.7e-66 | |
| TAIR|locus:2102762 | 312 | TOPP5 "type one serine/threoni | 0.295 | 0.923 | 0.465 | 1.5e-65 |
| TAIR|locus:2059610 BSL3 "BRI1 suppressor 1 (BSU1)-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4189 (1479.7 bits), Expect = 0., P = 0.
Identities = 806/981 (82%), Positives = 836/981 (85%)
Query: 1 MDVDSNMVPEADHDPAVEKENTSEESMEREQLADTEXXXXXXXXXXXXXX---XXXXXXX 57
MD+DS+MVPE D DP EN S E+E+ ++ +
Sbjct: 1 MDLDSSMVPENDQDPIATSENQSPME-EKEEASEQQTGSESESASLTPSLPPPSQQQQQQ 59
Query: 58 XXXXXXXXVVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLI 117
VVGPRCAPTYSVVNA+IEKKEDGPGPRCGHTLTAV AVGEEGT YIGPRLI
Sbjct: 60 QQQPQVTAVVGPRCAPTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLI 119
Query: 118 LFGGATALEXXXXXXXXXXXXXXXXIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAA 177
LFGGATALE IRLAGATADVHCYDVL+NKWSR+TP+GEPP+PRAA
Sbjct: 120 LFGGATALEGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPRAA 179
Query: 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237
HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG
Sbjct: 180 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 239
Query: 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297
QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC
Sbjct: 240 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 299
Query: 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR 357
GGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGR
Sbjct: 300 GGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGR 359
Query: 358 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDL 417
MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDL
Sbjct: 360 MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDL 419
Query: 418 IFIYGGLRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQ-SRLPGRYGFVDERTR 476
IFIYGGLRGG N R PGRYGF DERT
Sbjct: 420 IFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAATNTPPGRSPGRYGFSDERTG 479
Query: 477 QTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGXXXXXXXXXXXXXX 536
+ +PE+APD +VVLG+PVAPP+NGDMYTDISTENAM+ G RR +KG
Sbjct: 480 E-LPESAPD-AVVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEAEA 537
Query: 537 XXXXXXXXKARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRX 593
KARQVNGEVELPDRDRGAEATPSGK +IKPDSA NS+ PAGVRLHHR
Sbjct: 538 ISATLAAAKARQVNGEVELPDRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRA 597
Query: 594 XXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIA 653
ETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKV+A
Sbjct: 598 VVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVA 657
Query: 654 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDL 713
HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEP+VLQLKAPIKIFGDLHGQFGDL
Sbjct: 658 HLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDL 717
Query: 714 MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773
MRLFDEYGSPSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALKVEY +NVHLIRGNHE
Sbjct: 718 MRLFDEYGSPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHE 777
Query: 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 833
AADINALFGFRIECIERMGERDGIW WHRINRLFNWLPLAALIEKKIICMHGGIGRSINH
Sbjct: 778 AADINALFGFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSINH 837
Query: 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 893
VEQIEN+QRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN
Sbjct: 838 VEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNN 897
Query: 894 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953
NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP
Sbjct: 898 NDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 957
Query: 954 LPPAISSPETSPERHIEDTWM 974
LPPAI+SPETSPERHIEDTWM
Sbjct: 958 LPPAITSPETSPERHIEDTWM 978
|
|
| TAIR|locus:2201776 BSL2 "BRI1 suppressor 1 (BSU1)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4128 (1458.2 bits), Expect = 0., P = 0.
Identities = 782/912 (85%), Positives = 812/912 (89%)
Query: 66 VVGPRCAPTYSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATAL 125
VVGPRCAPTYSVV+A+++KKEDGPGPRCGHTLTAV AVG+EGTPGYIGPRL+LFGGATAL
Sbjct: 79 VVGPRCAPTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATAL 138
Query: 126 EXXXXXXXXXXXXXXXXIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT 185
E IRLAGATADVHCYDVL+NKW+R+TPFGEPPTPRAAHVATAVGT
Sbjct: 139 EGNSGGTGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGT 198
Query: 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245
MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG
Sbjct: 199 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 258
Query: 246 GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305
GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA+SV
Sbjct: 259 GNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSV 318
Query: 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSV 365
PLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAVFVNARLHVSGGALGGGRMVEDSSSV
Sbjct: 319 PLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSV 378
Query: 366 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR 425
AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA+VELTRRCRHAAAAVGDLIFIYGGLR
Sbjct: 379 AVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLR 438
Query: 426 GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQSRLPGRYGFVDERTRQTIPEAAPD 485
GG + RLPGRYGF DER R+ + E+A D
Sbjct: 439 GGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRYGFSDERNRE-LSESAAD 497
Query: 486 GSVVLGNPVAPPINGDMYTDISTENAMLQGTRRLTKGXXXXXXXXXXXXXXXXXXXXXXK 545
G+VVLG+PVAPP+NGDM+TDIS ENA+L GTRR KG K
Sbjct: 498 GAVVLGSPVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLVEASAAEAEAISATLAAAK 557
Query: 546 ARQVNGEVELPDRDRGAEATPSGK---QMIKPDSAGSNSIAPAGVRLHHRXXXXXXETGG 602
ARQVNGEVELPDRD GAEATPSGK +IKPDS GS S+ PAG+RLHHR ETGG
Sbjct: 558 ARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPAGIRLHHRAVVVAAETGG 617
Query: 603 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK 662
ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK
Sbjct: 618 ALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWK 677
Query: 663 PPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 722
PPVRRQFFLDCNEIADLCDSAERIF+SEP+VLQLKAPIKIFGDLHGQFGDLMRLFDEYGS
Sbjct: 678 PPVRRQFFLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGS 737
Query: 723 PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFG 782
PSTAGDI+YIDYLFLGDYVDRGQHSLETI+LLLALKVEY +NVHLIRGNHEAADINALFG
Sbjct: 738 PSTAGDISYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNVHLIRGNHEAADINALFG 797
Query: 783 FRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR 842
FRIECIERMGERDGIW WHRINRLFNWLPLAA IEKKIICMHGGIGRSINHVEQIEN+QR
Sbjct: 798 FRIECIERMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHGGIGRSINHVEQIENIQR 857
Query: 843 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 902
PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA
Sbjct: 858 PITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRA 917
Query: 903 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPE 962
HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA+SSPE
Sbjct: 918 HECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPE 977
Query: 963 TSPERHIEDTWM 974
TSPERHIEDTWM
Sbjct: 978 TSPERHIEDTWM 989
|
|
| TAIR|locus:2139399 BSL1 "BRI1 suppressor 1 (BSU1)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1578 (560.5 bits), Expect = 3.1e-278, Sum P(2) = 3.1e-278
Identities = 303/411 (73%), Positives = 332/411 (80%)
Query: 566 PSGKQMIKP--DSAGSNSIAPAGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRV 623
PS P +S + VRLH R ET G+LGGMVRQLS+DQF+NE RR+
Sbjct: 443 PSTSDASSPIVESTTDGTANEGDVRLHPRAVVVAKETVGSLGGMVRQLSLDQFQNESRRM 502
Query: 624 SYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSA 683
K RQ S + KKVIA LL+PR WKPP R+FFLD E+ +LC +A
Sbjct: 503 VPMNNSDVPQPTKKFTRQKSPQGLHKKVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAA 562
Query: 684 ERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR 743
E+IF E +VLQLKAPIK+FGDLHGQFGDLMRLFDEYG PSTAGDI YIDYLFLGDYVDR
Sbjct: 563 EQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR 622
Query: 744 GQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRI 803
GQHSLETITLLLALK+EYP NVHLIRGNHEAADINALFGFR+ECIERMGE DGIWAW R
Sbjct: 623 GQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 682
Query: 804 NRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTE 863
N+LFN+LPLAALIE KIICMHGGIGRSI+ VEQIE ++RPITM+AGS+VLMDLLWSDPTE
Sbjct: 683 NQLFNYLPLAALIENKIICMHGGIGRSISTVEQIEKIERPITMDAGSLVLMDLLWSDPTE 742
Query: 864 NDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFS 923
NDS+EGLRPNARGPGLVTFGPDRV EFC N LQLI+RAHECVMDGFERFAQG LITLFS
Sbjct: 743 NDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFS 802
Query: 924 ATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWM 974
ATNYCGTANNAGAILV+GR LV+VPKLIHPLPP I SPE SPE +D WM
Sbjct: 803 ATNYCGTANNAGAILVVGRGLVIVPKLIHPLPPPILSPENSPEHSGDDAWM 853
|
|
| TAIR|locus:2825042 BSU1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1140 (406.4 bits), Expect = 6.5e-196, Sum P(3) = 6.5e-196
Identities = 209/332 (62%), Positives = 260/332 (78%)
Query: 643 SINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKI 702
S + KKVI+ LL+P+ W PP R FFL E+ LCD E+IF +EP++LQLK PIK+
Sbjct: 448 STQDLHKKVISTLLRPKTWTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKV 507
Query: 703 FGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762
FGD+HGQ+GDLMRLF EYG PS GDI +IDYLFLGDYVDRGQHSLE I LL ALK+EYP
Sbjct: 508 FGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYP 567
Query: 763 NNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIIC 822
N+HLIRGNHE+ +N ++GF EC ERMGE G AW +IN++F++LPLAAL+EKK++C
Sbjct: 568 KNIHLIRGNHESLAMNRIYGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLC 627
Query: 823 MHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTF 882
+HGGIGR++ +E+IEN++RP + GS+VL D+LWSDPT ND+V G+ NARG G+V+F
Sbjct: 628 VHGGIGRAVT-IEEIENIERPAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSF 686
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
GPD V F N L++I+RAHECV+DGFERFA G LIT+FSATNYCGTA NAGAILV+GR
Sbjct: 687 GPDIVKAFLERNGLEMILRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGR 746
Query: 943 DLVVVPKLIHPLPPAISSPETSPERHIEDTWM 974
D+V+ PKLIHP PP ISS E E + + WM
Sbjct: 747 DMVIYPKLIHPHPPPISSSE---EDYTDKAWM 775
|
|
| GENEDB_PFALCIPARUM|PF14_0630 PF14_0630 "protein serine/threonine phosphatase" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 139/249 (55%), Positives = 174/249 (69%)
Query: 718 DEYGSPSTA-GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
++ G A GDI DYLFLGDYVDRG +SLE I LL ALK +YP +HLIRGNHE
Sbjct: 603 EDLGEKLNAIGDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVA 662
Query: 777 INALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV 834
IN+L+GF+ EC R+ E D W++IN++F WLP+ A++E KI+C+HGGIG+SIN +
Sbjct: 663 INSLYGFQEECKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQI 722
Query: 835 EQIENLQRPITMEA-----GSIVLMDLLWSDPTENDSVEGLRPN-ARGPG----LVTFGP 884
I L+RP+ + + DLLWSDPT+NDS+ G PN R P +V +GP
Sbjct: 723 SDISQLKRPLVVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGP 782
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRV +F NDLQLI+RAHECVMDGFERFA G LITLFSATNYC + NAGA+L + RDL
Sbjct: 783 DRVHKFLEENDLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDL 842
Query: 945 VVVPKLIHP 953
V+PKLI+P
Sbjct: 843 TVIPKLIYP 851
|
|
| UNIPROTKB|Q8IKH5 PF14_0630 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 139/249 (55%), Positives = 174/249 (69%)
Query: 718 DEYGSPSTA-GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776
++ G A GDI DYLFLGDYVDRG +SLE I LL ALK +YP +HLIRGNHE
Sbjct: 603 EDLGEKLNAIGDIDSNDYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVA 662
Query: 777 INALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHV 834
IN+L+GF+ EC R+ E D W++IN++F WLP+ A++E KI+C+HGGIG+SIN +
Sbjct: 663 INSLYGFQEECKRRLKEDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQI 722
Query: 835 EQIENLQRPITMEA-----GSIVLMDLLWSDPTENDSVEGLRPN-ARGPG----LVTFGP 884
I L+RP+ + + DLLWSDPT+NDS+ G PN R P +V +GP
Sbjct: 723 SDISQLKRPLVVSQVPQNLNEQKVTDLLWSDPTDNDSILGTIPNDIRDPDGTGHIVKYGP 782
Query: 885 DRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
DRV +F NDLQLI+RAHECVMDGFERFA G LITLFSATNYC + NAGA+L + RDL
Sbjct: 783 DRVHKFLEENDLQLIIRAHECVMDGFERFAGGKLITLFSATNYCNSHKNAGALLFIRRDL 842
Query: 945 VVVPKLIHP 953
V+PKLI+P
Sbjct: 843 TVIPKLIYP 851
|
|
| TAIR|locus:2168484 TOPP2 "AT5G59160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 148/303 (48%), Positives = 198/303 (65%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R KP + Q L+ +EI LC + IF +P++L+L+APIKI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKPGTK-QAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P TA +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFSVR----LWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
+ +VEQI+N++RP T S +L DLLWSDP+++ V+G N RG TFGPD+V EF
Sbjct: 186 LTNVEQIKNIKRP-TDVPDSGLLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGPDKVAEF 241
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
ND+ LI RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ ++
Sbjct: 242 LIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQI 301
Query: 951 IHP 953
+ P
Sbjct: 302 LKP 304
|
|
| TAIR|locus:2063942 TOPP4 "type one serine/threonine protein phosphatase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 149/315 (47%), Positives = 204/315 (64%)
Query: 640 RQMSINS-VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA 698
+Q +I+S V +I L + R +P +Q L EI LC +A IF +P++L+L+A
Sbjct: 10 QQTAIDSAVLDDIIRRLTEVRLARPG--KQVQLSEAEIKQLCTTARDIFLQQPNLLELEA 67
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
PIKI GD+HGQ+ DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K
Sbjct: 68 PIKICGDIHGQYSDLLRLFEYGGFPPSA------NYLFLGDYVDRGKQSLETICLLLAYK 121
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEK 818
++YP N L+RGNHE A IN ++GF EC R R W FN LP+AALI+
Sbjct: 122 IKYPGNFFLLRGNHECASINRIYGFYDECKRRFNVR----VWKVFTDCFNCLPVAALIDD 177
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
KI+CMHGG+ ++H+++I NL RP TM + +L DLLWSDP ++ V+G N RG
Sbjct: 178 KILCMHGGLSPDLDHLDEIRNLPRP-TMIPDTGLLCDLLWSDPGKD--VKGWGMNDRGVS 234
Query: 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
TFGPD+V EF +DL L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++
Sbjct: 235 Y-TFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMM 293
Query: 939 VLGRDLVVVPKLIHP 953
+ +L+ +++ P
Sbjct: 294 SVDENLMCSFQILKP 308
|
|
| TAIR|locus:2180330 TOPP8 "AT5G27840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 146/311 (46%), Positives = 199/311 (63%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ +G K Q L +EI LC +A +IF S+P++L L API+I GD+HGQ+
Sbjct: 17 IIRRLLEGKGGK-----QVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQY 71
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P +A +YLFLGDYVDRG+ SLETI LLLA K+ YP+ ++L+RG
Sbjct: 72 QDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRG 125
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R R W FN LP+AALI++KI+CMHGG+
Sbjct: 126 NHEDAKINRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDEKILCMHGGLSPD 181
Query: 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEF 890
++++ QI +QRPI + + L DLLWSDP + +EG + RG TFG D+V EF
Sbjct: 182 LDNLNQIREIQRPIEIPDSGL-LCDLLWSDPDQK--IEGWADSDRGISC-TFGADKVAEF 237
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKL 950
+ NDL LI R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV ++
Sbjct: 238 LDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEI 297
Query: 951 IHPLPPAISSP 961
+ P P + S P
Sbjct: 298 MKPAPASSSHP 308
|
|
| TAIR|locus:2102762 TOPP5 "type one serine/threonine protein phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 142/305 (46%), Positives = 197/305 (64%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL R K + Q L+ +EI LC + IF +P +L+L AP+KI GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKAGTK-QAMLNDSEIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQY 75
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P A +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 76 SDLLRLFEYGGFPPAA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R + W FN LP+AA+I++KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFNVK----LWKVFTDTFNCLPVAAVIDEKILCMHGGLSPE 185
Query: 831 INHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +VEQI+N++RP + +AG +L DLLWSDP+++ V+G N RG TFG D+V E
Sbjct: 186 LINVEQIKNIERPTDVPDAG--LLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGADKVAE 240
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F ND+ L+ RAH+ V DG+E FA L+T+FSA NYCG +NAGA++ + L+ +
Sbjct: 241 FLIKNDMDLVCRAHQVVEDGYEFFADRQLVTMFSAPNYCGEFDNAGALMSVDESLMCSFQ 300
Query: 950 LIHPL 954
++ P+
Sbjct: 301 ILKPV 305
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SHS7 | BSL3_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.9003 | 0.9938 | 0.9632 | no | no |
| Q9SJF0 | BSL2_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.8777 | 0.9979 | 0.9557 | yes | no |
| Q2QM47 | BSL2_ORYSJ | 3, ., 1, ., 3, ., 1, 6 | 0.8513 | 0.9969 | 0.9633 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 975 | |||
| cd07419 | 311 | cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho | 0.0 | |
| smart00156 | 271 | smart00156, PP2Ac, Protein phosphatase 2A homologu | 1e-108 | |
| cd07414 | 293 | cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li | 1e-100 | |
| cd07415 | 285 | cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos | 4e-87 | |
| PTZ00480 | 320 | PTZ00480, PTZ00480, serine/threonine-protein phosp | 5e-79 | |
| cd00144 | 225 | cd00144, MPP_PPP_family, phosphoprotein phosphatas | 2e-72 | |
| PTZ00244 | 294 | PTZ00244, PTZ00244, serine/threonine-protein phosp | 2e-69 | |
| cd07416 | 305 | cd07416, MPP_PP2B, PP2B, metallophosphatase domain | 2e-67 | |
| PTZ00239 | 303 | PTZ00239, PTZ00239, serine/threonine protein phosp | 2e-67 | |
| cd07417 | 316 | cd07417, MPP_PP5_C, PP5, C-terminal metallophospha | 1e-66 | |
| cd07420 | 321 | cd07420, MPP_RdgC, Drosophila melanogaster RdgC an | 1e-50 | |
| cd07418 | 377 | cd07418, MPP_PP7, PP7, metallophosphatase domain | 3e-39 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-27 | |
| COG0639 | 155 | COG0639, ApaH, Diadenosine tetraphosphatase and re | 3e-12 | |
| cd07422 | 257 | cd07422, MPP_ApaH, Escherichia coli ApaH and relat | 6e-10 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-09 | |
| cd07424 | 207 | cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophos | 6e-09 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-08 | |
| PRK00166 | 275 | PRK00166, apaH, diadenosine tetraphosphatase; Revi | 5e-07 | |
| PHA02239 | 235 | PHA02239, PHA02239, putative protein phosphatase | 2e-06 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 4e-06 | |
| cd07425 | 208 | cd07425, MPP_Shelphs, Shewanella-like phosphatases | 8e-06 | |
| cd07421 | 304 | cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo | 2e-05 | |
| pfam07646 | 48 | pfam07646, Kelch_2, Kelch motif | 2e-05 | |
| cd07423 | 234 | cd07423, MPP_PrpE, Bacillus subtilis PrpE and rela | 1e-04 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 4e-04 | |
| pfam01344 | 46 | pfam01344, Kelch_1, Kelch motif | 5e-04 | |
| cd07413 | 222 | cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 | 8e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 0.001 | |
| TIGR04075 | 851 | TIGR04075, bacter_Pnkp, polynucleotide kinase-phos | 0.003 | |
| PRK13625 | 245 | PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphospha | 0.004 |
| >gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 630 bits (1627), Expect = 0.0
Identities = 239/311 (76%), Positives = 262/311 (84%), Gaps = 8/311 (2%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I HLLKPR WKPP R+FF + NEI +LCD+AE IF EP VL+L+APIKIFGD+HGQF
Sbjct: 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQF 60
Query: 711 GDLMRLFDEYGSPST--AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLI 768
GDLMRLFDEYGSP T AGDI YIDYLFLGDYVDRG +SLETI LLLALKV+YPN +HLI
Sbjct: 61 GDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLI 120
Query: 769 RGNHEAADINALFGFRIECIERMGE--RDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826
RGNHE DINALFGFR EC ER+GE DG W RINRLF WLPLAA+IE KI+CMHGG
Sbjct: 121 RGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGG 180
Query: 827 IGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNA---RGPGL-VTF 882
IGRSINHV +IE+L+RP+TME G V+MDLLWSDPTENDSV GLRPNA RGPGL V F
Sbjct: 181 IGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
GPDRV F NDLQ+I+RAHECVMDGFERFAQG LITLFSATNYCGTA NAGAILVLGR
Sbjct: 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGR 300
Query: 943 DLVVVPKLIHP 953
DL ++PKLIHP
Sbjct: 301 DLTIIPKLIHP 311
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 311 |
| >gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Score = 336 bits (863), Expect = e-108
Identities = 127/272 (46%), Positives = 171/272 (62%), Gaps = 14/272 (5%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
EI +L + IF EP+++++ AP+ + GD+HGQF DL+RLFD+ G P +
Sbjct: 4 EEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDKNGQP------PETN 57
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
Y+FLGDYVDRG S+E I LL ALK+ YPN + L+RGNHE+ +N ++GF EC + GE
Sbjct: 58 YVFLGDYVDRGPFSIEVILLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKYGE 117
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
R I+ N F+WLPLAALI KI+CMHGG+ + ++ I L+RP + L
Sbjct: 118 R--IYEK--FNEAFSWLPLAALINGKILCMHGGLSPDLTTLDDIRKLKRPQEPPDDGL-L 172
Query: 854 MDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERF 913
+DLLWSDP V G P+ RG FGPD V EF N+L+LI+RAH+ V DG+E F
Sbjct: 173 IDLLWSDPD--QPVNGFGPSIRGAS-YIFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFF 229
Query: 914 AQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
A G L+T+FSA NYC N A+L + +DL
Sbjct: 230 ADGKLVTIFSAPNYCDRFGNKAAVLKVDKDLK 261
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. Length = 271 |
| >gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-100
Identities = 142/305 (46%), Positives = 192/305 (62%), Gaps = 18/305 (5%)
Query: 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQF 710
+I LL+ RG +P + L EI LC + IF S+P +L+L+AP+KI GD+HGQ+
Sbjct: 5 IIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 62
Query: 711 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+RG
Sbjct: 63 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 116
Query: 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830
NHE A IN ++GF EC R I W FN LP+AA+I++KI CMHGG+
Sbjct: 117 NHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPD 172
Query: 831 INHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + G +L DLLWSDP ++ V+G N RG TFG D V +
Sbjct: 173 LQSMEQIRRIMRPTDVPDQG--LLCDLLWSDPDKD--VQGWGENDRGVS-FTFGKDVVAK 227
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F N +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 228 FLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 287
Query: 950 LIHPL 954
++ P
Sbjct: 288 ILKPA 292
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293 |
| >gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 4e-87
Identities = 118/272 (43%), Positives = 164/272 (60%), Gaps = 16/272 (5%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
+E+ LC+ A+ I E +V ++++P+ + GD+HGQF DL+ LF GD +
Sbjct: 18 SEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELF------RVGGDPPDTN 71
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
YLFLGDYVDRG +S+ET LLLALKV YP+ + L+RGNHE+ I ++GF EC+ + G
Sbjct: 72 YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYG- 130
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
W LF++LPLAALI+ +I C+HGG+ SI+ ++QI + R E
Sbjct: 131 --NANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDR--FQEVPHEGP 186
Query: 854 M-DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
M DLLWSDP D +EG + RG G FG D V EF +NN L LI RAH+ VM+G++
Sbjct: 187 MCDLLWSDP---DDIEGWGISPRGAG-YLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQW 242
Query: 913 FAQGHLITLFSATNYCGTANNAGAILVLGRDL 944
L+T++SA NYC N +I+ L L
Sbjct: 243 MFDDKLVTVWSAPNYCYRCGNVASIMELDEHL 274
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285 |
| >gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 5e-79
Identities = 139/315 (44%), Positives = 194/315 (61%), Gaps = 18/315 (5%)
Query: 639 DRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA 698
D++ I+ +I LL RG KP + L E+ LC A IF S+P +L+L+A
Sbjct: 4 DKKGEIDV--DNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEA 59
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
P+KI GD+HGQ+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K
Sbjct: 60 PLKICGDVHGQYFDLLRLFEYGGYPPES------NYLFLGDYVDRGKQSLETICLLLAYK 113
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEK 818
++YP N L+RGNHE A IN ++GF EC R I W FN LP+AALI++
Sbjct: 114 IKYPENFFLLRGNHECASINRIYGFYDECKRRY----TIKLWKTFTDCFNCLPVAALIDE 169
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
KI+CMHGG+ ++++EQI + RP + + L DLLWSDP ++ V+G N RG
Sbjct: 170 KILCMHGGLSPELSNLEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWADNERGVS 226
Query: 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
V F + V F ++L LI RAH+ V DG+E F++ L+TLFSA NYCG +NAG+++
Sbjct: 227 YV-FSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMM 285
Query: 939 VLGRDLVVVPKLIHP 953
+ L+ +++ P
Sbjct: 286 TIDESLMCSFQILKP 300
|
Length = 320 |
| >gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 2e-72
Identities = 103/245 (42%), Positives = 131/245 (53%), Gaps = 27/245 (11%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GD+HG DL+RL ++ G P +FLGDYVDRG S+E I LLLALK+
Sbjct: 2 VIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL- 54
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIE-----RMGERDGIWAWHRINRLFNWLPLAALI 816
P+NV L+RGNHE +N L+GF E R+ ++ G W N +F +LPLAALI
Sbjct: 55 PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALI 114
Query: 817 E-KKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875
E KK++C+HGG+ + EQI+ E DLLWSDP E G
Sbjct: 115 ETKKVLCVHGGLSPGLPLEEQIKEEPEDQLPE-------DLLWSDPLELPGGFGSSRRGG 167
Query: 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935
GP D V F N L+LIVR H V +G+E G+LIT+ S NYCG N
Sbjct: 168 GP-------DAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKL 220
Query: 936 AILVL 940
A LVL
Sbjct: 221 AALVL 225
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225 |
| >gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 2e-69
Identities = 113/293 (38%), Positives = 171/293 (58%), Gaps = 16/293 (5%)
Query: 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGD 705
S+ + +I +L +G + RQ + +I + IF S+P +L+++ P+++ GD
Sbjct: 2 SLVQTLIEKMLTVKGNRTQ--RQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGD 59
Query: 706 LHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765
HGQ+ DL+R+F++ G P Y +YLFLGDYVDRG+HS+ETITL K+ YP N
Sbjct: 60 THGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENF 113
Query: 766 HLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825
L+RGNHE A IN ++GF + + R I + +FN +P+ +I +KIICMHG
Sbjct: 114 FLLRGNHECASINKMYGF----FDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHG 169
Query: 826 GIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885
G+ + + + ++RP + I L DLLW+DP D V G + RG + FG D
Sbjct: 170 GLSPDLTSLASVNEIERPCDVPDRGI-LCDLLWADP--EDEVRGFLESDRGVSYL-FGED 225
Query: 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAIL 938
V +F + D+ LIVRAH+ + G+ FA L+T+FSA NYCG +N A++
Sbjct: 226 IVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVM 278
|
Length = 294 |
| >gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 227 bits (582), Expect = 2e-67
Identities = 103/268 (38%), Positives = 144/268 (53%), Gaps = 25/268 (9%)
Query: 683 AERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD 742
I EP++L+++AP+ + GD+HGQF DL++LF+ GSP+ YLFLGDYVD
Sbjct: 28 GAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT------RYLFLGDYVD 81
Query: 743 RGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHR 802
RG S+E + L ALK+ YP + L+RGNHE + F F+ EC + ER +
Sbjct: 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDA 137
Query: 803 INRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM-DLLWSDP 861
F+ LPLAAL+ ++ +C+HGG+ + ++ I L R E + M DLLWSDP
Sbjct: 138 CMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDR--FREPPAFGPMCDLLWSDP 195
Query: 862 TENDSVEGLR----PNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE--RFA 914
E+ E + N RG + V EF N+L I+RAHE G+ R +
Sbjct: 196 LEDFGNEKTQEHFVHNTVRGCSYF-YSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKS 254
Query: 915 QG----HLITLFSATNYCGTANNAGAIL 938
Q LIT+FSA NY NN A+L
Sbjct: 255 QTTGFPSLITIFSAPNYLDVYNNKAAVL 282
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 305 |
| >gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 2e-67
Identities = 112/267 (41%), Positives = 161/267 (60%), Gaps = 15/267 (5%)
Query: 679 LCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
+C+ A+ IF E +V ++AP+ + GD+HGQF DL LF E GDI +Y+F+G
Sbjct: 24 ICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKE------GGDIPNANYIFIG 77
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG +S+ET+ LL LKV+YP N+ L+RGNHE+ ++GF E + + G +
Sbjct: 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSN--- 134
Query: 799 AWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLW 858
W +F+ LPLAALIE +I+C+HGG+ + ++QI + R I + DL+W
Sbjct: 135 PWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMW 193
Query: 859 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-FAQGH 917
SDP E VE N+RG G + FG EFC NDL LI RAH+ VM+G++ F +
Sbjct: 194 SDPEE---VEYWAVNSRGAGYL-FGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQN 249
Query: 918 LITLFSATNYCGTANNAGAILVLGRDL 944
L+T++SA NYC N +IL L +L
Sbjct: 250 LVTVWSAPNYCYRCGNIASILCLDENL 276
|
Length = 303 |
| >gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 1e-66
Identities = 104/275 (37%), Positives = 151/275 (54%), Gaps = 34/275 (12%)
Query: 683 AERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
+ + PS++++ P I + GD HGQF DL+ +F+ G PS YLF G
Sbjct: 41 VKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YLFNG 95
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG S+E I L A K+ YPN+ HL RGNHE ++N ++GF E + E
Sbjct: 96 DFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE----- 150
Query: 799 AWHRINRLF----NWLPLAALIEKKIICMHGGI----GRSINHVEQIENLQRPITMEAGS 850
++ LF NWLPLA LI K++ +HGG+ G +++ + +I+ ++P ++G
Sbjct: 151 ---QMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQP--PDSG- 204
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
++ +LLWSDP G P+ RG G FGPD F N+L+ I+R+HE +G+
Sbjct: 205 -LMCELLWSDPQPQP---GRSPSKRGVGC-QFGPDVTKRFLEENNLEYIIRSHEVKDEGY 259
Query: 911 ERFAQGHLITLFSATNYCGTANNAGA-ILVLGRDL 944
E G IT+FSA NYC N GA I + G DL
Sbjct: 260 EVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDL 294
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 316 |
| >gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 1e-50
Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 44/295 (14%)
Query: 683 AERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLG 738
A ++ P++ ++ + I GDLHG+ DL +F + G PS Y+F G
Sbjct: 32 ARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP-----YVFNG 86
Query: 739 DYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
D+VDRG+ S+E + +L A + YPN VHL RGNHE +N +GF E + + G
Sbjct: 87 DFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYK-LHGKK 145
Query: 799 AWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR---------------- 842
+ +F+WLPLA +I+ KI+ +HGGI S + ++ ++ + R
Sbjct: 146 ILRLLEDVFSWLPLATIIDNKILVVHGGISDSTD-LDLLDKIDRHKYVSVLRPPLRKGME 204
Query: 843 -----------PITMEAGSIVLMDLLWSDPTENDSVEGLRPNA-RGPGLVTFGPDRVMEF 890
P+ +L D+LWSDP +G +PN RG G FGPD +
Sbjct: 205 ELTGEEEDPSEPLDKTEWRQIL-DILWSDPKAQ---KGCKPNTFRGGG-CYFGPDVTSKV 259
Query: 891 CNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945
+ L L++R+HEC +G+E +IT+FSA+NY +N GA + LG DL
Sbjct: 260 LQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 321 |
| >gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-39
Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 66/334 (19%)
Query: 663 PPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQL----KAPIKIFGDLHGQFGDLMRLFD 718
PP L N L +A +I EP+ +++ + + GD+HGQ D++ L +
Sbjct: 27 PPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86
Query: 719 EYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778
+ G P Y+F GDYVDRG LET LLL+ KV P+ V+L+RGNHE+
Sbjct: 87 DAGFPD-----QNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCT 141
Query: 779 ALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI------- 831
+++GF E + + G++ G + + F LPLA++I ++ HGG+ RS
Sbjct: 142 SMYGFEQEVLTKYGDK-GKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKK 200
Query: 832 ---NHVEQIENLQRPITMEAGSI--------------------VLMDLLWSDPTENDSVE 868
+ + +++ G++ + D+LWSDP+
Sbjct: 201 QKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTP--- 257
Query: 869 GLRPNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHE------------CVMDGF---ER 912
GL PN RG GL+ +GPD EF N+L+LI+R+HE + G+
Sbjct: 258 GLSPNKQRGIGLL-WGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHD 316
Query: 913 FAQGHLITLFSATNYCG------TANNAGAILVL 940
G LITLFSA +Y NN GA ++L
Sbjct: 317 VESGKLITLFSAPDYPQFQATEERYNNKGAYIIL 350
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 377 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-27
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 72/233 (30%)
Query: 699 PIKIFGDLHGQFGDL---MRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLL 755
I + GDLHG DL + L + G P D+ LFLGD VDRG SLE + LL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPK--PDL----VLFLGDLVDRGPPSLEVLALLF 54
Query: 756 ALKVEYPNNVHLIRGNHEAADINALFGFRIECIER---------------------MGER 794
ALK++ P V+L+RGNH+ N+ GF +EC + +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLYGK 114
Query: 795 DGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM 854
G W L + L LAAL++ KI+ +HG + S++ + I
Sbjct: 115 GGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDI----------------- 157
Query: 855 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907
FG + + + +N + L++R H V
Sbjct: 158 -------------------------YLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 3e-12
Identities = 52/157 (33%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 777 INALFGFRIECIERMGERDGIWAWHR-INRLFNWLPLAALIE-KKIICMHGGIGRSINH- 833
+ AL+GF E R + W F+ LPLAA+ E K++C HGG+ ++
Sbjct: 3 LTALYGFYDEK-LRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRL 61
Query: 834 VEQIENLQRPITME-AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCN 892
++ IE L R E + DLLWSDP D P RG G D F
Sbjct: 62 LDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRR-IWNPGPRGVPR--DGGDVTAVFGI 118
Query: 893 NNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCG 929
+ +LI RAH G L+T FSA NYC
Sbjct: 119 VHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155
|
Length = 155 |
| >gnl|CDD|163665 cd07422, MPP_ApaH, Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 6e-10
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 702 IFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYL-FLGDYVDRGQHSLETITLLLALKV 759
GD+ G + +L RL ++ P+ D L +GD V+RG SLET+ + +L
Sbjct: 3 AIGDIQGCYDELQRLLEKINFDPAK-------DRLWLVGDLVNRGPDSLETLRFVKSLG- 54
Query: 760 EYPNNVHLIRGNHEAADINAL---FGFRIECIERMGERD---GIWAWHRINRLFNWL--- 810
++ + GNH D++ L G I++ ++D I + L +WL
Sbjct: 55 ---DSAKTVLGNH---DLHLLAVAAG-----IKKPKKKDTLDDILNAPDRDELLDWLRHQ 103
Query: 811 PLAALIEKKIICM-HGGI 827
PL + I M H GI
Sbjct: 104 PLLHRDPELGILMVHAGI 121
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathways in unknown. The PPP (phosphoprotein phosphatase) family, to which ApaH belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and PrpA/PrpB. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 4e-09
Identities = 75/285 (26%), Positives = 105/285 (36%), Gaps = 84/285 (29%)
Query: 82 IEKKEDGPGPRCGHTLTAVA----AVGEEGTPGY-IGPRLILFGGATALEGNSAASGTPS 136
+E+K +GPG RC H + V + G E TP I L +F T S A+G
Sbjct: 156 VEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVP 215
Query: 137 SAGSAGIRLA--GATADV-------------HCYDVLTNKWSRITPFGEPPTPRAAHVAT 181
G+R+ G+T V + +D TN+W +TP E PTPR+ H
Sbjct: 216 HLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMA 275
Query: 182 AVGTMVVIQGGI--------------------------------GPAGLSA--------- 200
A V + GG+ G AGL
Sbjct: 276 ADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVY 335
Query: 201 -------EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPL 253
+D+H D Q +W +V G P R A VG ++++ GG PL
Sbjct: 336 GFNGCEVDDVHYYDPVQD--KWTQVETFGVRPSERSVFASAAVG-KHIVIFGGEIAMDPL 392
Query: 254 ADV---------WALDTAAKPYEWRKLEPEG--EGPPPCMYATAS 287
A V +ALDT + +W +L+ G E P TAS
Sbjct: 393 AHVGPGQLTDGTFALDT--ETLQWERLDKFGEEEETPSSRGWTAS 435
|
Length = 470 |
| >gnl|CDD|163667 cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 6e-09
Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 26/103 (25%)
Query: 704 GDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYLF-LGDYVDRGQHSLETITLLLALKVEY 761
GD+HG + L + D G P D L +GD +DRG SL + LL
Sbjct: 7 GDIHGHYSLLQKALDAVGFDP-------ARDRLISVGDLIDRGPESLACLELL-----LE 54
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRIN 804
P H +RGNHE I+ + N
Sbjct: 55 P-WFHAVRGNHEQM-----------AIDALRAEPLDAVRWLAN 85
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 207 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 4e-08
Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 46/272 (16%)
Query: 169 GEPPTPRAAHVATAVGTMVVIQGG-IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227
G+ P PR +H VG + GG + P +DL+V D W + G P
Sbjct: 17 GKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHT--WS--IAPANGDVP 72
Query: 228 R---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR---KLEPEGEGPPPC 281
R G M VG + L GG D KR +D ++ DT EW KL+ EG GP
Sbjct: 73 RISCLGVRMVAVGTK-LYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEG-GPEAR 128
Query: 282 MYATASARSDGLLLLCGGRDASSVPLAS------AYGLAKHRDGRWEWAIAPGVSPSPRY 335
+ + ++ + + + G + AY +A DG+W PG + R
Sbjct: 129 TFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIA---DGKWVQLPDPGENFEKRG 185
Query: 336 QHAAVFVNARLHVSGG----ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYS 391
V ++ V G L GG+ +S++V D A+G W + ++ P
Sbjct: 186 GAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKP------ 239
Query: 392 ADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ R A A VG I I+GG
Sbjct: 240 ------------SARSVFAHAVVGKYIIIFGG 259
|
Length = 341 |
| >gnl|CDD|234673 PRK00166, apaH, diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 5e-07
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 702 IFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYIDYL-FLGDYVDRGQHSLETITLLLALKV 759
GD+ G + +L RL ++ P+ D L +GD V+RG SLE + + +L
Sbjct: 5 AIGDIQGCYDELQRLLEKIDFDPAK-------DTLWLVGDLVNRGPDSLEVLRFVKSLG- 56
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERD---GIWAWHRINRLFNWL---PLA 813
++ + GNH D++ L I+R ++D I + L +WL PL
Sbjct: 57 ---DSAVTVLGNH---DLHLLAVAA--GIKRNKKKDTLDPILEAPDRDELLDWLRHQPLL 108
Query: 814 A-LIEKKIICMHGGI 827
E ++ +H GI
Sbjct: 109 HVDEELGLVMVHAGI 123
|
Length = 275 |
| >gnl|CDD|107154 PHA02239, PHA02239, putative protein phosphatase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + D+HG++ L+ + D+ + + +FLGDYVDRG+ S + + + L
Sbjct: 3 IYVVPDIHGEYQKLLTIMDKINNERKPEETI----VFLGDYVDRGKRSKDVVNYIFDLMS 58
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIW 798
N V L+ GNH+ N +E ++R+ D W
Sbjct: 59 NDDNVVTLL-GNHDDEFYNI-----MENVDRLSIYDIEW 91
|
Length = 235 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 4e-06
Identities = 68/268 (25%), Positives = 98/268 (36%), Gaps = 33/268 (12%)
Query: 158 LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG-IGPAGLSAEDLHVLDLTQQRPRWH 216
L KW ++ GE P R +H VG + GG P + L+V DL + W
Sbjct: 149 LLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETR--TWS 206
Query: 217 RVVVQGPGPGPR-YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG 275
G P G M +G L GG D R ++ DT EW+ L P
Sbjct: 207 ISPATGDVPHLSCLGVRMVSIGST-LYVFGGRDASRQYNGFYSFDTTTN--EWKLLTPVE 263
Query: 276 EGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY 335
EGP P + + +A + + + G + + +Y + D +W PG S S R
Sbjct: 264 EGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIV---DKKWFHCSTPGDSFSIRG 320
Query: 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAA 395
V ++ V G G V+D V D W ++ P
Sbjct: 321 GAGLEVVQGKVWVVYGF--NGCEVDD---VHYYDPVQDKWTQVETFGVRP---------- 365
Query: 396 GGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ R A+AAVG I I+GG
Sbjct: 366 --------SERSVFASAAVGKHIVIFGG 385
|
Length = 470 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 4e-06
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ D+HG L + + + + D L LGD V G E + LAL +
Sbjct: 2 VISDIHGNLEALEAVLEAALAAAEKPDF----VLVLGDLVGDGPDPEEVLAAALALLLLL 57
Query: 762 PNNVHLIRGNHE 773
V+++ GNH+
Sbjct: 58 GIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 33/145 (22%), Positives = 45/145 (31%), Gaps = 28/145 (19%)
Query: 703 FGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLF--LGDYVDRGQHSLETITLLLALKVE 760
GDLHG + G + LGD DRG +E + LL L+ E
Sbjct: 3 IGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQE 62
Query: 761 YP---NNVHLIRGNHEA-----------ADINALFGFRIECIERMGERDGIWAWHRINRL 806
VH + GNHE FG + G
Sbjct: 63 AAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELG------- 115
Query: 807 FNWL---PLAALIEKKIICMHGGIG 828
WL P+ + + +HGG+G
Sbjct: 116 -RWLRSKPVIVKVN-DTLFVHGGLG 138
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208 |
| >gnl|CDD|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 704 GDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763
GD+HG L L+ S D A +FLGDY DRG + + I L++L ++P
Sbjct: 8 GDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67
Query: 764 NVHL-IRGNHEAA 775
H+ + GNH+ A
Sbjct: 68 QRHVFLCGNHDFA 80
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 304 |
| >gnl|CDD|116261 pfam07646, Kelch_2, Kelch motif | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-05
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 333 PRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381
PRY HA+V V +L+V GG+ G SS + VLD VW + ++
Sbjct: 1 PRYPHASVVVGGKLYVVGGS--TGLGDLSSSDLWVLDPETNVWTELPAL 47
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Drosophila ring canal kelch protein is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 48 |
| >gnl|CDD|163666 cd07423, MPP_PrpE, Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYG-SPSTAGDIAYID---YLFLGDYVDRGQHSLETITLL 754
P I GD+HG + +L L ++ G G + + + +F+GD VDRG S E + L+
Sbjct: 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLV 61
Query: 755 LALKVEYPNNVHLIRGNHE 773
+++ V + GNH+
Sbjct: 62 MSM-VA-AGAALCVPGNHD 78
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 234 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 4e-04
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 22/138 (15%)
Query: 83 EKKEDGPGPRCGHTLTAVA----AVGEEGTPG-YIGPRLILFGGATALEGNSAASGTPSS 137
+K GPGPRC H + V + G E P +I L +F T + A+G
Sbjct: 14 QKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPR 73
Query: 138 AGSAGIRLAG---------------ATADVHCYDVLTNKWSRITPFGEP--PTPRAAHVA 180
G+R+ +D + YD + N+W+ +T E P R H
Sbjct: 74 ISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSM 133
Query: 181 TAVGTMVVIQGGIGPAGL 198
+ V + GG+ GL
Sbjct: 134 ASDENHVYVFGGVSKGGL 151
|
Length = 341 |
| >gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 5e-04
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273
PR G + ++G + IGG DG + L+ V D W KL
Sbjct: 1 PRSGAGVVVLGG-KIYVIGGYDGGQSLSSVEVYDPETN--TWSKLPS 44
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46 |
| >gnl|CDD|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID--YLFLGDYVDRGQHSLETITLLLALKV 759
GD+HG L+ L + G +G + + +FLGD +DRG E + ++ ++ V
Sbjct: 3 FIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSM-V 61
Query: 760 EYPNNVHL-IRGNHEAADINAL 780
+ L + GNHE NA+
Sbjct: 62 D--AGHALAVMGNHE---FNAI 78
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 222 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.001
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 227 PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEP 273
PR H +G L GG + L+DVW D + W +L
Sbjct: 1 PRAYHTSTSIGDGRLYLFGGENEDGSVLSDVWVFDLSTN--TWTRLPS 46
|
Length = 49 |
| >gnl|CDD|234457 TIGR04075, bacter_Pnkp, polynucleotide kinase-phosphatase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.003
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDY---------LFLGDYVDRGQHSLE 749
P I GD+HG +L L +E G + +F+GD VDRG S
Sbjct: 181 PFDIIGDVHGCRDELETLLEELGYQIERDEGGRPVDVTHPEGRKAVFVGDLVDRGPDSPG 240
Query: 750 TITLLLALKVEYPNNVHLIRGNHEAADINALFG 782
+ L++ + V + GNH+ + AL G
Sbjct: 241 VLRLVMGM-VA-AGTALCVPGNHDVKLLRALRG 271
|
Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring [Transcription, RNA processing]. Length = 851 |
| >gnl|CDD|184187 PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.004
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 24/146 (16%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID---YLFLGDYVDRGQHSLETITLLLA 756
I GD+HG + + L ++ G ++G + D F+GD DRG HSL I ++
Sbjct: 3 YDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWE 62
Query: 757 LKVEYPNNVHLIRGNHEAADINALFGF--------------RIECIERMGERDGIWAWHR 802
L VE + + GNH N L+ F + E + +
Sbjct: 63 L-VEK-KAAYYVPGNH----CNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEK 116
Query: 803 INRLFNWLPL-AALIEKKIICMHGGI 827
L+ PL L E +++ H GI
Sbjct: 117 FITLYEQAPLYHILDEGRLVVAHAGI 142
|
Length = 245 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 975 | |||
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 100.0 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 100.0 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 100.0 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 100.0 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 100.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 100.0 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 100.0 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 100.0 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 100.0 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 100.0 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 100.0 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 100.0 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 100.0 | |
| KOG0375 | 517 | consensus Serine-threonine phosphatase 2B, catalyt | 100.0 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 100.0 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 100.0 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 100.0 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 100.0 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 100.0 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 99.98 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 99.97 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 99.97 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 99.97 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.97 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.96 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.96 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.95 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.95 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.94 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 99.94 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.93 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.93 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 99.93 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 99.87 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.87 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 99.85 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 99.84 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 99.84 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 99.83 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 99.82 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 99.79 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.79 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.77 | |
| PHA02239 | 235 | putative protein phosphatase | 99.77 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.73 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.72 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.52 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.45 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.3 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 98.95 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.76 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.75 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.72 | |
| PLN02772 | 398 | guanylate kinase | 98.71 | |
| PLN02772 | 398 | guanylate kinase | 98.7 | |
| COG0639 | 155 | ApaH Diadenosine tetraphosphatase and related seri | 98.68 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.68 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.65 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.6 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.6 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.49 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.48 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.48 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.44 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.44 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.41 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.36 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.36 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.35 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.25 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.23 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.16 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.1 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 98.07 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.99 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.94 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.92 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 97.92 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 97.86 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.82 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 97.81 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 97.79 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 97.72 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 97.68 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 97.61 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 97.52 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 97.46 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 97.41 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 97.37 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.36 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 97.34 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 97.24 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.05 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 97.01 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.01 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 96.93 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.87 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 96.86 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 96.81 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 96.79 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.78 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 96.7 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 96.6 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 96.6 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 96.59 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 96.56 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.43 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 96.41 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 96.24 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.23 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.21 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 96.18 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 96.17 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 96.15 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 96.05 | |
| KOG0918 | 476 | consensus Selenium-binding protein [Inorganic ion | 95.97 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 95.89 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 95.72 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 95.71 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 95.63 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 95.44 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 95.44 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 95.33 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 95.28 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 95.21 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 95.14 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 94.84 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 94.54 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 94.46 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 94.45 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.41 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 94.15 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.04 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 93.93 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 93.81 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 93.49 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 93.14 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 92.8 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 91.6 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 91.29 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 90.71 | |
| PLN02533 | 427 | probable purple acid phosphatase | 90.57 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 90.55 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 89.96 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 89.35 | |
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 89.35 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 88.59 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 88.46 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 88.43 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 88.26 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 88.08 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 88.07 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 87.22 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 85.95 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 84.49 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 84.4 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 84.3 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 83.79 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 83.78 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 83.3 | |
| PF09910 | 339 | DUF2139: Uncharacterized protein conserved in arch | 82.91 | |
| PF02191 | 250 | OLF: Olfactomedin-like domain; InterPro: IPR003112 | 82.5 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 82.34 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 82.26 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 81.57 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 81.42 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 81.13 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 80.9 |
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-76 Score=591.14 Aligned_cols=288 Identities=40% Similarity=0.726 Sum_probs=274.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
+++.|+.|++.+ .+.+.++..||.++.+||.+|++|+.++.|+.|+|||||||.||+.+|+.-|.++..
T Consensus 3 ldr~ie~L~~~~----------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t- 71 (303)
T KOG0372|consen 3 LDRQIEQLRRCE----------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPET- 71 (303)
T ss_pred HHHHHHHHHhcC----------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCC-
Confidence 578899998763 689999999999999999999999999999999999999999999999999888766
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|+|||||||||.+|+|++.||++||++||++|+|||||||.+.++..|||++||.+|||. ..+|+.+.++|
T Consensus 72 -----~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~---~~vWr~c~eiF 143 (303)
T KOG0372|consen 72 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS---ANVWRYCTEIF 143 (303)
T ss_pred -----ceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCC---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999996 47999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||++|+|+++|||||||++|.+.++++|+.+.|..+++.++ .++|||||||.+. .||.-++||+| +.||.+++
T Consensus 144 dyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g-~m~DllWSDPee~---~g~~~SPRGaG-ylFG~dvv 218 (303)
T KOG0372|consen 144 DYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDG-AMCDLLWSDPEEG---PGWGLSPRGAG-YLFGEDVV 218 (303)
T ss_pred HhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCC-cchheeccCcccC---CCcccCCCCcc-ccccHHHH
Confidence 9999999999999999999999999999999999999998876 8999999999873 59999999999 79999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAIS 959 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 959 (975)
++||+.||+++|+|+||.|++||++.++++|+|||||||||+..+|.||||.|+++....|++|+..+...+
T Consensus 219 ~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 219 ESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR 290 (303)
T ss_pred HHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999988765443
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-70 Score=597.21 Aligned_cols=296 Identities=51% Similarity=0.886 Sum_probs=275.5
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhC-CCCC
Q 002047 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYG-SPST 725 (975)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g-~~~~ 725 (975)
.++++|..++..........+...|+.+||.+||..+.++|..+|+++++++||+|+|||||||.||+++|+..| +|+.
T Consensus 8 ~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~ 87 (331)
T KOG0374|consen 8 DLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPD 87 (331)
T ss_pred hHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCc
Confidence 356677777765443333333445899999999999999999999999999999999999999999999999999 8876
Q ss_pred CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhc
Q 002047 726 AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR 805 (975)
Q Consensus 726 ~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~ 805 (975)
. +|||||||||||++|+|+|.||+++|++||++||+||||||++.+|..|||++||.+||++ ..+|..|++
T Consensus 88 ~------~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~ 158 (331)
T KOG0374|consen 88 Q------NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFND 158 (331)
T ss_pred c------cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHH
Confidence 6 8999999999999999999999999999999999999999999999999999999999975 469999999
Q ss_pred cccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHH
Q 002047 806 LFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885 (975)
Q Consensus 806 ~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~ 885 (975)
.|++||++|+|+++|+|+||||+|.+.++++|+.|.||...++.+ +++|||||||.. .+.+|.+|.||.+ +.||++
T Consensus 159 ~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~g-ll~DLlWsdp~~--~~~g~~~n~Rg~s-~~fg~~ 234 (331)
T KOG0374|consen 159 AFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKG-LLCDLLWSDPDD--DVPGWEENDRGVS-FTFGPA 234 (331)
T ss_pred HHhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccc-eeeeeeecCCCC--CCCCcccCCCcee-eEecHH
Confidence 999999999999999999999999999999999999998777665 999999999987 3789999999999 899999
Q ss_pred HHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCC
Q 002047 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (975)
Q Consensus 886 ~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 955 (975)
++++||+++++++||||||+|+||||+|++++++||||||+|||.++|+||+|.+++++.+++++++|..
T Consensus 235 ~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 235 VVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred HHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999954
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-69 Score=529.24 Aligned_cols=287 Identities=37% Similarity=0.709 Sum_probs=271.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
+++.|+...+.+ .|+++|+..||+.++++|..|.++..++.|+.|+|||||||.||+++|+..|-.+..
T Consensus 6 ~d~wi~~vk~ck----------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t- 74 (306)
T KOG0373|consen 6 LDQWIETVKKCK----------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT- 74 (306)
T ss_pred HHHHHHHHHHcC----------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCc-
Confidence 456666665543 689999999999999999999999999999999999999999999999998876644
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||+|||||||.+|+|++.+|+.||.+||.+|.|||||||.+.+...|||++||..|||.. ..|+.+.++|
T Consensus 75 -----nYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVF 146 (306)
T KOG0373|consen 75 -----NYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVF 146 (306)
T ss_pred -----ceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999975 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
+.|+++|+|++++||||||++|++.++++|+-|.|-.++|.++ .++||+||||.+ ++.|.-++||+| +.||.+++
T Consensus 147 D~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G-~fcDlmWSDPed---ve~W~vSpRGAG-wlFGskVt 221 (306)
T KOG0373|consen 147 DFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEG-PFCDLMWSDPED---VETWAVSPRGAG-WLFGSKVT 221 (306)
T ss_pred hhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCC-CccceeccChhh---hhhheeCCCCcc-eeechhhh
Confidence 9999999999999999999999999999999999999999877 899999999985 788999999999 68999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCe-EEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGH-LITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAI 958 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~-~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 958 (975)
++|+..|+|++|.|+||.|++||+++++.| |+|||||||||+..+|.++||.++.+++.++|++..++...
T Consensus 222 ~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~ 293 (306)
T KOG0373|consen 222 TEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNS 293 (306)
T ss_pred HHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCcc
Confidence 999999999999999999999999999988 99999999999999999999999999999999999888764
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-67 Score=574.09 Aligned_cols=295 Identities=46% Similarity=0.823 Sum_probs=276.0
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+.+++.+.+++. ....|++++|.+||++|+++|++||+++++..+++|||||||||.+|.++|+..++++..
T Consensus 11 ~~~~i~~~~~~~~~~~~--~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~- 87 (320)
T PTZ00480 11 VDNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES- 87 (320)
T ss_pred HHHHHHHHHhccccCcc--ccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc-
Confidence 78899999987766542 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++++||+.+|+++|+.+|.+|++||||||...++..|||..||..+|+. .+|..++++|
T Consensus 88 -----~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~----~l~~~~~~~F 158 (320)
T PTZ00480 88 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTI----KLWKTFTDCF 158 (320)
T ss_pred -----eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999953 5999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+||+|++++|||||||+|.+.++++|+.++||.+.+... ++.|+|||||.. ...+|.+|+||.| +.||++++
T Consensus 159 ~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWSDP~~--~~~~~~~s~RG~g-~~FG~~~~ 234 (320)
T PTZ00480 159 NCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTG-LLCDLLWSDPDK--DVQGWADNERGVS-YVFSQEIV 234 (320)
T ss_pred HhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccc-hhhheeecCccc--ccCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999876554 899999999986 3578999999999 68999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAI 958 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 958 (975)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++.+.++.+.|.+...
T Consensus 235 ~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 305 (320)
T PTZ00480 235 QVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQ 305 (320)
T ss_pred HHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998876655
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=571.42 Aligned_cols=286 Identities=33% Similarity=0.604 Sum_probs=256.4
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecC----CEEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~----~i~vvGDiHG~~~~L~~ll~~~g 721 (975)
+.++++|+.|++.. .|+.+++.+||++|+++|++||+|+++.. |++|||||||||.+|+++|+..|
T Consensus 5 ~~~~~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g 74 (321)
T cd07420 5 DHIDALIEAFKEKQ----------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNG 74 (321)
T ss_pred HHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcC
Confidence 34788999998642 47889999999999999999999999986 89999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
+++... +|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||.+||..+|+.. ...+|.
T Consensus 75 ~~~~~~-----~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~ 148 (321)
T cd07420 75 LPSPEN-----PYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILR 148 (321)
T ss_pred CCCccc-----eEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHH
Confidence 886432 79999999999999999999999999999999999999999999999999999999999863 467999
Q ss_pred hhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCccc-----CC---------------------CCcceec
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-----EA---------------------GSIVLMD 855 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~-----~~---------------------~~~~~~d 855 (975)
.++++|++||+||+|++++|||||||++ ..++++|++|+|+... +. +..++.|
T Consensus 149 ~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 227 (321)
T cd07420 149 LLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILD 227 (321)
T ss_pred HHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhhe
Confidence 9999999999999999999999999996 5789999999884210 11 0136789
Q ss_pred cccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcE
Q 002047 856 LLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935 (975)
Q Consensus 856 llWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~g 935 (975)
+|||||.+. ...|.++.||.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+..+|+|
T Consensus 228 lLWSDP~~~--~~~~~~~~RG~g-~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~g 304 (321)
T cd07420 228 ILWSDPKAQ--KGCKPNTFRGGG-CYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRG 304 (321)
T ss_pred eeecCCccC--CCCCccCCCCCc-cccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccE
Confidence 999999853 233666789999 68999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCceEEeEEe
Q 002047 936 AILVLGRDLVVVPKLI 951 (975)
Q Consensus 936 a~l~i~~~~~~~~~~~ 951 (975)
|+|+|++++.+.+.++
T Consensus 305 avl~i~~~~~~~f~~~ 320 (321)
T cd07420 305 AYIKLGPDLTPHFVQY 320 (321)
T ss_pred EEEEECCCCceeEEEe
Confidence 9999999998877665
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-66 Score=574.47 Aligned_cols=303 Identities=79% Similarity=1.341 Sum_probs=279.5
Q ss_pred HHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCC--CC
Q 002047 651 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA--GD 728 (975)
Q Consensus 651 ~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~--~~ 728 (975)
+|++||+++.|+++..+++.|+++++.+||++|+++|++||+++++..|++|||||||||.+|.++|+.+++++.. ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4789999999999888888999999999999999999999999999999999999999999999999999987641 22
Q ss_pred ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCc--ccchhhhhhhcc
Q 002047 729 IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGER--DGIWAWHRINRL 806 (975)
Q Consensus 729 ~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~--~~~~~~~~~~~~ 806 (975)
....+|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. ....+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 222379999999999999999999999999999999999999999999999999999999999862 335699999999
Q ss_pred ccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCC---CCCce-eee
Q 002047 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNA---RGPGL-VTF 882 (975)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~---rg~~~-~~f 882 (975)
|++||+++++++++|||||||+|.+.++++|+.+.||...+....++.|+|||||...+...+|.++. ||.|. +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998544444589999999999766567888876 99995 799
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecC
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 953 (975)
|++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|++++++++.+++|+|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=557.74 Aligned_cols=284 Identities=43% Similarity=0.778 Sum_probs=266.8
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+++++.. .|+.+++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..++++..
T Consensus 2 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~- 70 (285)
T cd07415 2 LDKWIEQLKKCE----------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDT- 70 (285)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCC-
Confidence 467888887642 478999999999999999999999999999999999999999999999999987755
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++++||+.+|++||+.+|.+|++||||||.+.++..|||..||..+|+. ..+|..++++|
T Consensus 71 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f 142 (285)
T cd07415 71 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLF 142 (285)
T ss_pred -----eEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999975 36999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||++|++++++|||||||+|.+.++++|++|+||.+.+..+ ++.|+|||||... .+|.+|.||.| +.||++++
T Consensus 143 ~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~~---~~~~~~~Rg~g-~~fg~~~~ 217 (285)
T cd07415 143 DYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEG-PMCDLLWSDPDDI---EGWGISPRGAG-YLFGQDVV 217 (285)
T ss_pred HHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCC-CccceEecCCCcc---CCCCcCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999998877654 8899999999863 68999999999 78999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 955 (975)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++++.++.+.|.+
T Consensus 218 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 218 EEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred HHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988753
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-65 Score=560.05 Aligned_cols=291 Identities=38% Similarity=0.743 Sum_probs=269.8
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST 725 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~ 725 (975)
++++++|..+++...+.. .....++.++|.+||++|+++|++||+++++..|++|||||||||.+|+++|+.+++++.
T Consensus 2 ~~~~~~i~~~~~~~~~~~--~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~ 79 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRT--QRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPY 79 (294)
T ss_pred chHHHHHHHHHhcccCCC--ccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCc
Confidence 356788899888654432 234468999999999999999999999999999999999999999999999999999876
Q ss_pred CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhc
Q 002047 726 AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR 805 (975)
Q Consensus 726 ~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~ 805 (975)
+ +|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|..+++
T Consensus 80 ~------~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~----~l~~~~~~ 149 (294)
T PTZ00244 80 S------NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNI----KLFKAFTD 149 (294)
T ss_pred c------cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhH----HHHHHHHH
Confidence 5 7999999999999999999999999999999999999999999999999999999999964 59999999
Q ss_pred cccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHH
Q 002047 806 LFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885 (975)
Q Consensus 806 ~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~ 885 (975)
+|++||++|++++++|||||||+|.+.++++|+.++||.+.+... ++.|+|||||.. ...+|.+|+||.| +.||++
T Consensus 150 ~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~ 225 (294)
T PTZ00244 150 VFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRG-ILCDLLWADPED--EVRGFLESDRGVS-YLFGED 225 (294)
T ss_pred HHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccc-hhheeeecCccc--ccCCCCcCCCCCc-cccCHH
Confidence 999999999999999999999999999999999999999876544 899999999985 3578999999999 789999
Q ss_pred HHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEec
Q 002047 886 RVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIH 952 (975)
Q Consensus 886 ~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 952 (975)
++++||++||+++||||||++++||+++++++||||||||||||..+|+||+|.|++++.+.++++.
T Consensus 226 ~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~ 292 (294)
T PTZ00244 226 IVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIP 292 (294)
T ss_pred HHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEee
Confidence 9999999999999999999999999999999999999999999999999999999999999988764
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-65 Score=560.65 Aligned_cols=291 Identities=48% Similarity=0.857 Sum_probs=270.5
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+.+++.+.++. .....|+++++.+||++|+++|++||+++++..+++||||||||+.+|+++|+..++++..
T Consensus 2 ~~~~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~- 78 (293)
T cd07414 2 IDSIIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 78 (293)
T ss_pred HHHHHHHHHhccccCC--cccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcc-
Confidence 4678888888765543 2344689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++++||+.+|+++|+.||.++++||||||.+.++..|||..||..+|+. .+|..++++|
T Consensus 79 -----~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~----~l~~~~~~~f 149 (293)
T cd07414 79 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 149 (293)
T ss_pred -----eEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999864 5999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||++|++++++|||||||+|.+.++++|+.++||.+.+... ++.|+|||||.. ...+|.+|+||.| +.||++++
T Consensus 150 ~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~ 225 (293)
T cd07414 150 NCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGKDVV 225 (293)
T ss_pred HHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchh-hHhhhhccCccc--ccCCCccCCCCcc-eecCHHHH
Confidence 9999999999999999999999999999999999998876544 899999999986 3578999999999 68999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 954 (975)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++.+.++.++|.
T Consensus 226 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 226 AKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred HHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988763
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-65 Score=557.38 Aligned_cols=287 Identities=41% Similarity=0.746 Sum_probs=267.1
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+.+++.. .|+++++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~- 71 (303)
T PTZ00239 3 IDRHIATLLNGG----------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNA- 71 (303)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 567888887642 478999999999999999999999999999999999999999999999999887655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++++||+.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. .+|..++++|
T Consensus 72 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f 143 (303)
T PTZ00239 72 -----NYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVF 143 (303)
T ss_pred -----eEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||++|++++++|||||||+|.+.++++|+.|+||.+++..+ +++|+|||||.+ ..+|.+|.||.| +.||++++
T Consensus 144 ~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~Rg~g-~~fg~~~~ 218 (303)
T PTZ00239 144 DCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMWSDPEE---VEYWAVNSRGAG-YLFGAKVT 218 (303)
T ss_pred HhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCC-CceeeEecCccc---cCCCccCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999999887655 789999999985 468999999999 68999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecC-CeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQ-GHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAI 958 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~-~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 958 (975)
++||++||+++||||||++++||+++++ ++|||||||||||+..+|+||+|.+++++++.++.+.|.+...
T Consensus 219 ~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 219 KEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESA 290 (303)
T ss_pred HHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCccc
Confidence 9999999999999999999999998665 5599999999999999999999999999999999999987754
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-64 Score=553.99 Aligned_cols=293 Identities=35% Similarity=0.638 Sum_probs=268.9
Q ss_pred ChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----EEEEecCCCCHHHHHHHHHHh
Q 002047 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEY 720 (975)
Q Consensus 645 ~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~----i~vvGDiHG~~~~L~~ll~~~ 720 (975)
.++++++|+.+++.+ .|+.+++.+||++|.++|++||+++++..| ++|||||||||.+|+++|+..
T Consensus 13 ~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~ 82 (316)
T cd07417 13 LEFVKEMIEWFKDQK----------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELN 82 (316)
T ss_pred HHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhc
Confidence 467889999998742 478899999999999999999999999866 999999999999999999999
Q ss_pred CCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhh
Q 002047 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAW 800 (975)
Q Consensus 721 g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~ 800 (975)
++++..+ +|||||||||||++|+|||.+|++||+.+|++|++||||||.+.++..|||..|+..+|+. .+|
T Consensus 83 g~~~~~~-----~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~----~l~ 153 (316)
T cd07417 83 GLPSETN-----PYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE----QMF 153 (316)
T ss_pred CCCCccC-----eEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccH----HHH
Confidence 9876542 7999999999999999999999999999999999999999999999999999999999864 589
Q ss_pred hhhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCce
Q 002047 801 HRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGL 879 (975)
Q Consensus 801 ~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~ 879 (975)
..++++|++||+++++++++||||||| ++.+.++++|++++||.+.+.. .+++|+|||||.+. .+|.+|.||.|
T Consensus 154 ~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~-~~~~dllWsDP~~~---~~~~~s~Rg~g- 228 (316)
T cd07417 154 DLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDS-GLMCELLWSDPQPQ---PGRSPSKRGVG- 228 (316)
T ss_pred HHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCcc-ccceeeeecCCCCC---CCCCccCCCCc-
Confidence 999999999999999999999999999 5678899999999999776554 48999999999863 57999999999
Q ss_pred eeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcC-CceEEeEEecCCCCCC
Q 002047 880 VTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-DLVVVPKLIHPLPPAI 958 (975)
Q Consensus 880 ~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~~~ 958 (975)
+.||++++++||++||+++||||||++++||+++++++|+|||||||||+..+|+||+|+|++ ++++.++.+.+.+.+.
T Consensus 229 ~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~ 308 (316)
T cd07417 229 CQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPN 308 (316)
T ss_pred eEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCC
Confidence 699999999999999999999999999999999999999999999999999999999999999 8999999998876665
Q ss_pred CCC
Q 002047 959 SSP 961 (975)
Q Consensus 959 ~~~ 961 (975)
.-|
T Consensus 309 ~~~ 311 (316)
T cd07417 309 VKP 311 (316)
T ss_pred CCc
Confidence 443
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-63 Score=545.87 Aligned_cols=287 Identities=36% Similarity=0.636 Sum_probs=260.7
Q ss_pred HHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCCC
Q 002047 649 KKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGD 728 (975)
Q Consensus 649 ~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~ 728 (975)
+-+++++++.. .|+++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++..
T Consensus 4 ~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~-- 71 (305)
T cd07416 4 DVLKAHFMREG----------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT-- 71 (305)
T ss_pred HHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc--
Confidence 44666666542 478899999999999999999999999999999999999999999999999987765
Q ss_pred ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhcccc
Q 002047 729 IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFN 808 (975)
Q Consensus 729 ~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~ 808 (975)
+|||||||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||..||..+|+. .+|..++++|+
T Consensus 72 ----~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f~ 143 (305)
T cd07416 72 ----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMEAFD 143 (305)
T ss_pred ----eEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccH----HHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999998853 58999999999
Q ss_pred ccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCC----CCcccC-CCCCceeeeC
Q 002047 809 WLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSV----EGLRPN-ARGPGLVTFG 883 (975)
Q Consensus 809 ~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~----~~~~~n-~rg~~~~~fg 883 (975)
+||+++++++++|||||||++.+.++++|++|+||.+.+..+ +++|+|||||...+.. .+|.+| .||.| +.||
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g-~~fG 221 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFG-PMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCS-YFYS 221 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCC-cceeeeecCcccccccccccccccccCCCCCc-eecC
Confidence 999999999999999999999999999999999998776554 8899999999864321 257776 89999 7999
Q ss_pred HHHHHHHHHHcCCeEEEEeccccccceEEecCC------eEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCC
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 957 (975)
++++++||++||+++||||||++++||++++++ +|||||||||||+..+|+||+|.++++. +.++.+.+.+-+
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred HHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 999999999999999999999999999998886 9999999999999999999999999985 688888776544
Q ss_pred C
Q 002047 958 I 958 (975)
Q Consensus 958 ~ 958 (975)
+
T Consensus 301 ~ 301 (305)
T cd07416 301 Y 301 (305)
T ss_pred C
Confidence 3
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-63 Score=538.31 Aligned_cols=269 Identities=47% Similarity=0.897 Sum_probs=254.6
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHH
Q 002047 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET 750 (975)
Q Consensus 671 l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev 750 (975)
++++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.. +|||||||||||++++||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~------~~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDT------NYVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCc------eEEEeCCccCCCCChHHH
Confidence 35789999999999999999999999999999999999999999999999987655 899999999999999999
Q ss_pred HHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCc
Q 002047 751 ITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRS 830 (975)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~ 830 (975)
+.+|++||+.+|.+|++||||||.+.++..|||..||..+|+. .+|..++++|++||+++++++++|||||||+|.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~ 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCCc
Confidence 9999999999999999999999999999999999999999964 699999999999999999999999999999999
Q ss_pred ccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccce
Q 002047 831 INHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910 (975)
Q Consensus 831 ~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~ 910 (975)
+.++++|++|+||.+.+.. .++.|+|||||.. ...+|.+|.||.| +.||++++++||++||+++||||||++++||
T Consensus 151 ~~~l~~i~~i~r~~~~~~~-~~~~dllWsDP~~--~~~~~~~~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 226 (271)
T smart00156 151 LTTLDDIRKLKRPQEPPDE-GLLIDLLWSDPDQ--PVDGFQPSIRGAS-YYFGPDAVDEFLKKNNLKLIIRAHQVVDDGY 226 (271)
T ss_pred cCCHHHHhcccCCCCCCch-hhhhheeecCCCc--ccCCCccCCCCCc-cccCHHHHHHHHHHCCCeEEEecCcccCCcE
Confidence 9999999999999877654 4899999999974 3578999999999 6899999999999999999999999999999
Q ss_pred EEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecC
Q 002047 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 953 (975)
Q Consensus 911 ~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 953 (975)
+++++++|||||||||||+..+|+||+|.+++++++.++++.|
T Consensus 227 ~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~ 269 (271)
T smart00156 227 EFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKP 269 (271)
T ss_pred EEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999998876
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-61 Score=534.73 Aligned_cols=299 Identities=33% Similarity=0.571 Sum_probs=257.7
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCEEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~----~~i~vvGDiHG~~~~L~~ll~~~g 721 (975)
+.++.||+.+.....--.+......|+.++|.+||++|+++|++||+++++. .+++||||||||+.+|+++|+..|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g 89 (377)
T cd07418 10 EWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAG 89 (377)
T ss_pred HHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhC
Confidence 4577888887543211122333446889999999999999999999999998 899999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
+++.+. +|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..|||..||..+|+.. +..+|+
T Consensus 90 ~~~~~~-----~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~~~l~~ 163 (377)
T cd07418 90 FPDQNR-----FYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-GKHVYR 163 (377)
T ss_pred CCCCCc-----eEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-HHHHHH
Confidence 876542 69999999999999999999999999999999999999999999999999999999999864 457999
Q ss_pred hhhccccccceEEEEcceEEEecCCcc---------------------------CcccCHhhhhhccCCc-ccCCCC--c
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGIG---------------------------RSINHVEQIENLQRPI-TMEAGS--I 851 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi~---------------------------~~~~~~~~i~~i~rp~-~~~~~~--~ 851 (975)
.++++|++||+++++++++|||||||+ +.+.++++|+.++||. +.+..+ .
T Consensus 164 ~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~ 243 (377)
T cd07418 164 KCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNL 243 (377)
T ss_pred HHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccc
Confidence 999999999999999999999999993 4567999999999985 443322 2
Q ss_pred ceeccccCCCCCCCCCCCcccC-CCCCceeeeCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecC---
Q 002047 852 VLMDLLWSDPTENDSVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC------------VMDGFERFAQ--- 915 (975)
Q Consensus 852 ~~~dllWsdP~~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~------------~~~G~~~~~~--- 915 (975)
+++|||||||.. ..+|.+| .||.| +.||++++++||++|++++||||||| |++||+++++
T Consensus 244 i~~dlLWSDP~~---~~g~~~~~~RG~g-~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~ 319 (377)
T cd07418 244 IPGDVLWSDPSL---TPGLSPNKQRGIG-LLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVES 319 (377)
T ss_pred cceeeEeeCCcc---CCCCCccCCCCCc-cccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCC
Confidence 578999999986 3578787 79999 68999999999999999999999996 6899999887
Q ss_pred CeEEEEecccccc------CCCCCcEEEEEEcCCc--eEEeEEecCC
Q 002047 916 GHLITLFSATNYC------GTANNAGAILVLGRDL--VVVPKLIHPL 954 (975)
Q Consensus 916 ~~~iTvfSa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~~~ 954 (975)
++||||||||||| +..+|+||+++++.+- ...++.+...
T Consensus 320 ~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 320 GKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred CcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 9999999999999 5689999999997654 4555555443
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-60 Score=480.56 Aligned_cols=285 Identities=40% Similarity=0.709 Sum_probs=267.1
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++..|..|.+.+ .+++.++..||+.|+++|.+|.+|..++.|++|+||+||||++|+++|+.-|..+..
T Consensus 20 vd~~ie~L~~ck----------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdt- 88 (319)
T KOG0371|consen 20 VDPWIEQLYKCK----------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDT- 88 (319)
T ss_pred cccchHHHHhcC----------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCc-
Confidence 455667776653 578899999999999999999999999999999999999999999999877766544
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|+|+|||||||++|+|++.+|.++|++||++|.+||||||.+.+...|||++||.+|||.. .+|..|.++|
T Consensus 89 -----nylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlf 160 (319)
T KOG0371|consen 89 -----NYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 160 (319)
T ss_pred -----ceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999975 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
+++|++|+|+++|||+|||++|++.+++.++.+.|-.+++.++ .++|||||||.+ .-+|..++||+| +.||.+..
T Consensus 161 dy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evpheg-pmcDlLwsdpdd---r~gwg~sprgag-~tfg~di~ 235 (319)
T KOG0371|consen 161 DYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEG-PMCDLLWSDPDD---RCGWGISPRGAG-YTFGQDIS 235 (319)
T ss_pred hccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCC-ChhheeccCccc---CCCCCCCCCCCC-cccchhhH
Confidence 9999999999999999999999999999999999988888776 788999999985 679999999999 79999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 956 (975)
++|-.+||+++|-|+||.+++||.+.+...++|||||||||+..+|.+|++.+++.....+..|+|.+-
T Consensus 236 ~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~ 304 (319)
T KOG0371|consen 236 EQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPR 304 (319)
T ss_pred HHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998443
|
|
| >KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=495.88 Aligned_cols=275 Identities=37% Similarity=0.650 Sum_probs=250.3
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHH
Q 002047 670 FLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLE 749 (975)
Q Consensus 670 ~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~e 749 (975)
.|+++..++|+.++..+|++|++++++++||.|+|||||||.||+++|+.-|.|... +|+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t------~YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT------RYLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccc------eeEeeccccccceeeee
Confidence 478999999999999999999999999999999999999999999999998877655 89999999999999999
Q ss_pred HHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccC
Q 002047 750 TITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829 (975)
Q Consensus 750 vl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~ 829 (975)
|+.+|.+||+.||..+++||||||++.+...|.|..||..||.+ .+|+++.+.|+.|||||+.++.+||||||++|
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse----~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccH----HHHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 99999999999999999999999999999999999999999965 59999999999999999999999999999999
Q ss_pred cccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCcccC-CCCCceeeeCHHHHHHHHHHcCCeEEEEecc
Q 002047 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHE 904 (975)
Q Consensus 830 ~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~ 904 (975)
.+.+++||++|.|..++|.-+ .+||||||||.++.. .+.|.+| .||+. +.|.-.++.+||+.|||--|||+||
T Consensus 210 Ei~tl~DIr~l~RF~EpPa~G-pmCDLLWsDPlEdfgnek~~e~f~hNsvRGCS-yfysy~A~C~FLq~nnLLSIiRAHE 287 (517)
T KOG0375|consen 210 EIHTLDDIRKLDRFKEPPAFG-PMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCS-YFYSYPAVCEFLQNNNLLSIIRAHE 287 (517)
T ss_pred ccccHHHHHhhhhccCCCccC-cchhhhccChhhhccccccccccccCcccccc-ceechHHHHHHHHhCCchhhhhhhh
Confidence 999999999999999988766 999999999987432 2356666 89998 7899999999999999999999999
Q ss_pred ccccceEEecCC------eEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCC
Q 002047 905 CVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (975)
Q Consensus 905 ~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 957 (975)
.++.||..+-.. .||||||||||.+..+|++|||..+.++ +-.+++...|-+
T Consensus 288 AQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncSPHP 345 (517)
T KOG0375|consen 288 AQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCCCCC
Confidence 999999876554 4899999999999999999999998764 344555544433
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-52 Score=447.61 Aligned_cols=280 Identities=33% Similarity=0.637 Sum_probs=247.7
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCEEEEecCCCCHHHHHHHHHHhCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSP 723 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~----~~i~vvGDiHG~~~~L~~ll~~~g~~ 723 (975)
++.+|+.+... ..|.+..++.|+.+|+++|++-|++-++. ..|.||||+||.++||+-||-+.|+|
T Consensus 121 i~~lieaFk~k----------q~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 121 IDLLIEAFKKK----------QRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred HHHHHHHHHHh----------hhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 56667665432 25778889999999999999999999985 57999999999999999999999999
Q ss_pred CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhh
Q 002047 724 STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRI 803 (975)
Q Consensus 724 ~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~ 803 (975)
+... -|||.||+||||.+|+|||++|+++.+.||..|||-|||||+..+|..|||-.|+..||... +..+...+
T Consensus 191 S~~n-----pYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~-~k~Ilr~l 264 (631)
T KOG0377|consen 191 SSSN-----PYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRH-GKRILRFL 264 (631)
T ss_pred CCCC-----CeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhc-ccHHHHHH
Confidence 9774 79999999999999999999999999999999999999999999999999999999999764 67788999
Q ss_pred hccccccceEEEEcceEEEecCCccCcccCHhhhhhccC---------Cccc--CC----------CCcceeccccCCCC
Q 002047 804 NRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR---------PITM--EA----------GSIVLMDLLWSDPT 862 (975)
Q Consensus 804 ~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~r---------p~~~--~~----------~~~~~~dllWsdP~ 862 (975)
.++|.|||++.+|+.+||+|||||+.. +.++-|.+|+| |.+. +. +++.+.|+|||||.
T Consensus 265 eevy~WLPi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~ 343 (631)
T KOG0377|consen 265 EEVYRWLPIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQ 343 (631)
T ss_pred HHHHHhcchhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcc
Confidence 999999999999999999999999876 67777777665 2211 00 23457899999998
Q ss_pred CCCCCCCcccC-CCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEc
Q 002047 863 ENDSVEGLRPN-ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG 941 (975)
Q Consensus 863 ~~~~~~~~~~n-~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~ 941 (975)
.+ .|..|| .||.| ++||+|++.+||++++++++||+|||.++|||+.+|++|+|||||+||.....|+||++.+.
T Consensus 344 ~~---~GC~pNt~RGgG-~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~ 419 (631)
T KOG0377|consen 344 AT---MGCVPNTLRGGG-CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLG 419 (631)
T ss_pred cc---cCCCcccccCCc-ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeC
Confidence 64 677788 79999 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEe
Q 002047 942 RDLVVVP 948 (975)
Q Consensus 942 ~~~~~~~ 948 (975)
+.+.-.+
T Consensus 420 ~~~~Phf 426 (631)
T KOG0377|consen 420 NQLTPHF 426 (631)
T ss_pred CCCCchH
Confidence 8876444
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=405.48 Aligned_cols=277 Identities=39% Similarity=0.672 Sum_probs=251.4
Q ss_pred cCHHHHHHHHHHHHHHHhcCCCeeeecC----CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC
Q 002047 671 LDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH 746 (975)
Q Consensus 671 l~~~~i~~l~~~~~~~~~~ep~~l~l~~----~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~ 746 (975)
|...-+..|+..+..+++++|+++++.. .+.|+||+||||.||+++|...|.|+... .|+|.||+||||..
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~-----~ylfngdfv~rgs~ 257 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN-----PYLFNGDFVDRGSW 257 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc-----cccccCceeeeccc
Confidence 4455567899999999999999999864 48999999999999999999999998764 89999999999999
Q ss_pred hHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCC
Q 002047 747 SLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG 826 (975)
Q Consensus 747 s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgG 826 (975)
+.|++..+++.|+.+|+++|++|||||...++..|||..|+..+|.+. .+..+.++|.+||++-+|+++++.+|||
T Consensus 258 s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~----~~~~f~~~f~~LPl~~~i~~~~~~~hgg 333 (476)
T KOG0376|consen 258 SVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEE----MFNLFSEVFIWLPLAHLINNKVLVMHGG 333 (476)
T ss_pred ceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHH----HHHhhhhhhccccchhhhcCceEEEecC
Confidence 999999999999999999999999999999999999999999999764 6777779999999999999999999999
Q ss_pred ccC-cccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccc
Q 002047 827 IGR-SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (975)
Q Consensus 827 i~~-~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (975)
+.. .-.++++|++|.|+...+ +...++|+|||||.. ..|..++.||.| ..||+|++++||+.|++++|||+||+
T Consensus 334 lf~~~~v~l~d~r~i~r~~~~~-~~~~~~~~lws~pq~---~~g~s~S~r~~g-~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 334 LFSPDGVTLEDFRNIDRFEQPP-EEGLMCELLWSDPQP---ANGRSPSKRGVG-LQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred cCCCCCccHHHHHhhhhccCCc-ccccccccccCCCcc---ccCCCccccCce-eeeCCCchhhHHhhcchHHHhhcccc
Confidence 964 446899999999995444 444999999999986 478999999999 68999999999999999999999999
Q ss_pred cccceEEecCCeEEEEeccccccCCCCCcEEEEEEc-CCceEEeEEecCCCCCCCCC
Q 002047 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAISSP 961 (975)
Q Consensus 906 ~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~~~~ 961 (975)
.+.||++.++|+|+|||||||||...+|.||++.++ ++++.++..+.++|-.-.-|
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ 465 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKP 465 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCC
Confidence 999999999999999999999999999999999998 78888888888877655433
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=347.48 Aligned_cols=305 Identities=24% Similarity=0.276 Sum_probs=230.6
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
.+....+..|.||.+|+++++ +++||||||...... ...+++|+||+.+
T Consensus 11 ~~~~~~~~~P~pR~~h~~~~~------------~~~iyv~GG~~~~~~-------------------~~~~~~~~yd~~~ 59 (341)
T PLN02153 11 KVEQKGGKGPGPRCSHGIAVV------------GDKLYSFGGELKPNE-------------------HIDKDLYVFDFNT 59 (341)
T ss_pred EecCCCCCCCCCCCcceEEEE------------CCEEEEECCccCCCC-------------------ceeCcEEEEECCC
Confidence 333344568999999999998 789999999853211 1568999999999
Q ss_pred CcEEEecCCCCCCCC-ccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec--CCCCCCCcccEEEEe
Q 002047 160 NKWSRITPFGEPPTP-RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPGPGPRYGHVMALV 236 (975)
Q Consensus 160 ~~W~~l~~~g~~P~p-R~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~--g~~P~~R~~h~~~~~ 236 (975)
++|+.+++++..|.. +.+|++++++++||+|||.... ...+++++||+.+++ |+.++.. ...|.+|.+|+++++
T Consensus 60 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~t~~--W~~~~~~~~~~~p~~R~~~~~~~~ 136 (341)
T PLN02153 60 HTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEK-REFSDFYSYDTVKNE--WTFLTKLDEEGGPEARTFHSMASD 136 (341)
T ss_pred CEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCC-CccCcEEEEECCCCE--EEEeccCCCCCCCCCceeeEEEEE
Confidence 999999887644443 4589999999999999998544 346899999999875 9988732 123889999999999
Q ss_pred CCcEEEEEcCCCCC------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC-------
Q 002047 237 GQRYLMAIGGNDGK------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS------- 303 (975)
Q Consensus 237 ~~~~lyV~GG~~g~------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~------- 303 (975)
++ +||||||.+.. ..++++++||+.++ +|+.+++++..|.+|..|.++ +.+++|||+||.+..
T Consensus 137 ~~-~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~l~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~gG~~ 212 (341)
T PLN02153 137 EN-HVYVFGGVSKGGLMKTPERFRTIEAYNIADG--KWVQLPDPGENFEKRGGAGFA-VVQGKIWVVYGFATSILPGGKS 212 (341)
T ss_pred CC-EEEEECCccCCCccCCCcccceEEEEECCCC--eEeeCCCCCCCCCCCCcceEE-EECCeEEEEeccccccccCCcc
Confidence 88 89999998642 24689999999999 999999887666666666554 568999999997521
Q ss_pred CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCC-----CccccCCcEEEEECCCCeEEEc
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG-----RMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~-----~~~~~~~dv~~yD~~t~~W~~v 378 (975)
...+++++.|++.++ +|+.....+..|.+|..|++++++++||||||..... ......+++|+||+++++|+.+
T Consensus 213 ~~~~~~v~~yd~~~~-~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~ 291 (341)
T PLN02153 213 DYESNAVQFFDPASG-KWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKL 291 (341)
T ss_pred ceecCceEEEEcCCC-cEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEEec
Confidence 123678999988866 4444433345688999999999999999999974211 0112367999999999999998
Q ss_pred ccCcCCCCCCCCccccCCCCCccCCCccceeEEEEE--CCEEEEEcCCCC-CCCccceEeeecc
Q 002047 379 KSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRG-GVLLDDLLVAEDL 439 (975)
Q Consensus 379 ~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~-~~~l~Dv~~ld~~ 439 (975)
.....+ ..|.+|++|+++.+ +++||||||+++ ...++|+|+++..
T Consensus 292 ~~~~~~----------------~~pr~~~~~~~~~v~~~~~~~~~gG~~~~~~~~~~~~~~~~~ 339 (341)
T PLN02153 292 GECGEP----------------AMPRGWTAYTTATVYGKNGLLMHGGKLPTNERTDDLYFYAVN 339 (341)
T ss_pred cCCCCC----------------CCCCccccccccccCCcceEEEEcCcCCCCccccceEEEecc
Confidence 754222 12345555555554 348999999866 4789999998753
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=359.26 Aligned_cols=304 Identities=21% Similarity=0.309 Sum_probs=239.7
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
......++.|.||++|+++++ +++||||||....... ..+++|+||+.+
T Consensus 154 ~~~~~~~~~P~pR~~h~~~~~------------~~~iyv~GG~~~~~~~-------------------~~~~v~~yD~~~ 202 (470)
T PLN02193 154 IKVEQKGEGPGLRCSHGIAQV------------GNKIYSFGGEFTPNQP-------------------IDKHLYVFDLET 202 (470)
T ss_pred EEcccCCCCCCCccccEEEEE------------CCEEEEECCcCCCCCC-------------------eeCcEEEEECCC
Confidence 333455668999999999998 7899999997532210 457899999999
Q ss_pred CcEEEecCCCCCCC-CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCC
Q 002047 160 NKWSRITPFGEPPT-PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ 238 (975)
Q Consensus 160 ~~W~~l~~~g~~P~-pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~ 238 (975)
++|..++.+++.|. +|.+|++++++++||||||.... ..++++|+||+.+++ |+.+.+.+..|.+|+.|+++++++
T Consensus 203 ~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~-~~~ndv~~yD~~t~~--W~~l~~~~~~P~~R~~h~~~~~~~ 279 (470)
T PLN02193 203 RTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS-RQYNGFYSFDTTTNE--WKLLTPVEEGPTPRSFHSMAADEE 279 (470)
T ss_pred CEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCC-CCCccEEEEECCCCE--EEEcCcCCCCCCCccceEEEEECC
Confidence 99999887765565 46799999999999999998643 357899999999975 999985555699999999999988
Q ss_pred cEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC
Q 002047 239 RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (975)
Q Consensus 239 ~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~ 318 (975)
+||||||.++...++++++||+.++ +|+.++.....|.+|..|.++ +.+++||++||.++. .+++++.|++.++
T Consensus 280 -~iYv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~R~~~~~~-~~~gkiyviGG~~g~--~~~dv~~yD~~t~ 353 (470)
T PLN02193 280 -NVYVFGGVSATARLKTLDSYNIVDK--KWFHCSTPGDSFSIRGGAGLE-VVQGKVWVVYGFNGC--EVDDVHYYDPVQD 353 (470)
T ss_pred -EEEEECCCCCCCCcceEEEEECCCC--EEEeCCCCCCCCCCCCCcEEE-EECCcEEEEECCCCC--ccCceEEEECCCC
Confidence 8999999988888999999999999 999998766556666665554 558999999998654 4789999988866
Q ss_pred CeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCC-----ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccc
Q 002047 319 GRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSAD 393 (975)
Q Consensus 319 ~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~-----~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~ 393 (975)
+|+.....+..|.+|..|++++++++|||+||...... .....+++|+||+.+++|+.+..+...
T Consensus 354 -~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~~~~~~~~~--------- 423 (470)
T PLN02193 354 -KWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGEE--------- 423 (470)
T ss_pred -EEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEEEcccCCCC---------
Confidence 55444444556889999999999999999999864211 012367899999999999998866321
Q ss_pred cCCCCCccCCCccceeEEE--EE-C-CEEEEEcCCCC-CCCccceEeeecc
Q 002047 394 AAGGDAAVELTRRCRHAAA--AV-G-DLIFIYGGLRG-GVLLDDLLVAEDL 439 (975)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~--~~-~-~~LyV~GG~~~-~~~l~Dv~~ld~~ 439 (975)
...|.+|..|+++ .+ + +.|+||||+++ +.+++|+|.++..
T Consensus 424 ------~~~P~~R~~~~~~~~~~~~~~~~~~fGG~~~~~~~~~D~~~~~~~ 468 (470)
T PLN02193 424 ------EETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGID 468 (470)
T ss_pred ------CCCCCCCccccceeeEEcCCceEEEEcCCCCccccccceEEEecC
Confidence 1235678777543 23 3 46999999875 5889999999754
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=314.20 Aligned_cols=300 Identities=24% Similarity=0.392 Sum_probs=247.0
Q ss_pred CCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCC-
Q 002047 90 GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF- 168 (975)
Q Consensus 90 ~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~- 168 (975)
+-|.+|+++++ |++||-|||+-........ --=|++.++..+.+|+++++.
T Consensus 12 PrRVNHAavaV------------G~riYSFGGYCsGedy~~~----------------~piDVH~lNa~~~RWtk~pp~~ 63 (392)
T KOG4693|consen 12 PRRVNHAAVAV------------GSRIYSFGGYCSGEDYDAK----------------DPIDVHVLNAENYRWTKMPPGI 63 (392)
T ss_pred cccccceeeee------------cceEEecCCcccccccccC----------------CcceeEEeeccceeEEecCccc
Confidence 46899999999 7999999998654432211 223899999999999999772
Q ss_pred ---------CCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 169 ---------GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 169 ---------g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
...|.-|++|+.+.+.+++|++||.++.....+-+|.||++++ +|.+..+.|..|.+|-+|++|++++
T Consensus 64 ~ka~i~~~yp~VPyqRYGHtvV~y~d~~yvWGGRND~egaCN~Ly~fDp~t~--~W~~p~v~G~vPgaRDGHsAcV~gn- 140 (392)
T KOG4693|consen 64 TKATIESPYPAVPYQRYGHTVVEYQDKAYVWGGRNDDEGACNLLYEFDPETN--VWKKPEVEGFVPGARDGHSACVWGN- 140 (392)
T ss_pred ccccccCCCCccchhhcCceEEEEcceEEEEcCccCcccccceeeeeccccc--cccccceeeecCCccCCceeeEECc-
Confidence 1247789999999999999999999987777899999999998 5999999999999999999999998
Q ss_pred EEEEEcCCCC--CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC-------ccce
Q 002047 240 YLMAIGGNDG--KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP-------LASA 310 (975)
Q Consensus 240 ~lyV~GG~~g--~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~-------l~d~ 310 (975)
.+|||||+.. +...+|++.||+.+. +|+.+...+.+|.-|-.|+++++ ++++|||||+...... +.+.
T Consensus 141 ~MyiFGGye~~a~~FS~d~h~ld~~Tm--tWr~~~Tkg~PprwRDFH~a~~~-~~~MYiFGGR~D~~gpfHs~~e~Yc~~ 217 (392)
T KOG4693|consen 141 QMYIFGGYEEDAQRFSQDTHVLDFATM--TWREMHTKGDPPRWRDFHTASVI-DGMMYIFGGRSDESGPFHSIHEQYCDT 217 (392)
T ss_pred EEEEecChHHHHHhhhccceeEeccce--eeeehhccCCCchhhhhhhhhhc-cceEEEeccccccCCCccchhhhhcce
Confidence 8999999954 677899999999999 99999999997777777777666 6999999998654322 2233
Q ss_pred EEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCC
Q 002047 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRY 390 (975)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~ 390 (975)
..+.+..++.|.-....++.|.+|..|++.+++++||+|||+++.-. ..++++|+||++|..|..+...+.-
T Consensus 218 i~~ld~~T~aW~r~p~~~~~P~GRRSHS~fvYng~~Y~FGGYng~ln--~HfndLy~FdP~t~~W~~I~~~Gk~------ 289 (392)
T KOG4693|consen 218 IMALDLATGAWTRTPENTMKPGGRRSHSTFVYNGKMYMFGGYNGTLN--VHFNDLYCFDPKTSMWSVISVRGKY------ 289 (392)
T ss_pred eEEEeccccccccCCCCCcCCCcccccceEEEcceEEEecccchhhh--hhhcceeecccccchheeeeccCCC------
Confidence 33445556677666666788999999999999999999999987654 4589999999999999998876443
Q ss_pred ccccCCCCCccCCCccceeEEEEECCEEEEEcCCCC-------------------CCCccceEeeecccccc
Q 002047 391 SADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG-------------------GVLLDDLLVAEDLAAAE 443 (975)
Q Consensus 391 ~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~-------------------~~~l~Dv~~ld~~~~~~ 443 (975)
|.+|.++++++.+++||+|||... -..++|+.+||..+..+
T Consensus 290 ------------P~aRRRqC~~v~g~kv~LFGGTsP~~~~~~Spt~~~G~~~~~~LiD~SDLHvLDF~PsLK 349 (392)
T KOG4693|consen 290 ------------PSARRRQCSVVSGGKVYLFGGTSPLPCHPLSPTNYNGMISPSGLIDLSDLHVLDFAPSLK 349 (392)
T ss_pred ------------CCcccceeEEEECCEEEEecCCCCCCCCCCCccccCCCCCcccccccccceeeecChhHH
Confidence 679999999999999999999432 03468888888776443
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=344.19 Aligned_cols=264 Identities=23% Similarity=0.395 Sum_probs=241.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
.+.||++||...... ..+.+.+||+.++.|..++++ |.+|..+++++++++||++||
T Consensus 284 ~~~l~~vGG~~~~~~--------------------~~~~ve~yd~~~~~w~~~a~m---~~~r~~~~~~~~~~~lYv~GG 340 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQ--------------------SLRSVECYDPKTNEWSSLAPM---PSPRCRVGVAVLNGKLYVVGG 340 (571)
T ss_pred CCeEEEECCCCCCCc--------------------ccceeEEecCCcCcEeecCCC---CcccccccEEEECCEEEEEcc
Confidence 578999999976221 788999999999999999998 899999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.+.+...++++|+||+.++. |+.++ +|+.+|.+++++++++ +||++||.+|...++++++||+.++ +|+.++
T Consensus 341 ~~~~~~~l~~ve~YD~~~~~--W~~~a---~M~~~R~~~~v~~l~g-~iYavGG~dg~~~l~svE~YDp~~~--~W~~va 412 (571)
T KOG4441|consen 341 YDSGSDRLSSVERYDPRTNQ--WTPVA---PMNTKRSDFGVAVLDG-KLYAVGGFDGEKSLNSVECYDPVTN--KWTPVA 412 (571)
T ss_pred ccCCCcccceEEEecCCCCc--eeccC---CccCccccceeEEECC-EEEEEeccccccccccEEEecCCCC--cccccC
Confidence 97556678999999999985 99998 9999999999999998 8999999999999999999999999 999999
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCc
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGA 352 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~ 352 (975)
++.. +++.+++++.+++||++||.++....++.+.+|++.++ +|...+++ +.+|.++++++++++||++||+
T Consensus 413 ~m~~----~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~---~W~~~~~M-~~~R~~~g~a~~~~~iYvvGG~ 484 (571)
T KOG4441|consen 413 PMLT----RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN---TWTLIAPM-NTRRSGFGVAVLNGKIYVVGGF 484 (571)
T ss_pred CCCc----ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC---ceeecCCc-ccccccceEEEECCEEEEECCc
Confidence 9876 58888889999999999999888778999999999999 89999988 6999999999999999999999
Q ss_pred CCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCccc
Q 002047 353 LGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432 (975)
Q Consensus 353 ~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~D 432 (975)
++... ...+++||+++++|+.+..+ +.+|..+++++++++||++||+++..+++.
T Consensus 485 ~~~~~----~~~VE~ydp~~~~W~~v~~m---------------------~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ 539 (571)
T KOG4441|consen 485 DGTSA----LSSVERYDPETNQWTMVAPM---------------------TSPRSAVGVVVLGGKLYAVGGFDGNNNLNT 539 (571)
T ss_pred cCCCc----cceEEEEcCCCCceeEcccC---------------------ccccccccEEEECCEEEEEecccCccccce
Confidence 88332 66699999999999999888 569999999999999999999999999999
Q ss_pred eEeeeccc
Q 002047 433 LLVAEDLA 440 (975)
Q Consensus 433 v~~ld~~~ 440 (975)
+..+|...
T Consensus 540 ve~ydp~~ 547 (571)
T KOG4441|consen 540 VECYDPET 547 (571)
T ss_pred eEEcCCCC
Confidence 99997543
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=327.71 Aligned_cols=277 Identities=26% Similarity=0.388 Sum_probs=224.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCc--EEEEECCC----CcEEEecCCCCCCCCccceEEEEeCCE
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATAD--VHCYDVLT----NKWSRITPFGEPPTPRAAHVATAVGTM 186 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--v~~yD~~t----~~W~~l~~~g~~P~pR~~hsa~~~~~~ 186 (975)
+++|+.|+|.... .++. +|.+++.+ ++|.++.++++.|.||++|++++++++
T Consensus 120 ~~~ivgf~G~~~~----------------------~~~~ig~y~~~~~~~~~~~~W~~~~~~~~~P~pR~~h~~~~~~~~ 177 (470)
T PLN02193 120 GGKIVGFHGRSTD----------------------VLHSLGAYISLPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQVGNK 177 (470)
T ss_pred CCeEEEEeccCCC----------------------cEEeeEEEEecCCChhhhceEEEcccCCCCCCCccccEEEEECCE
Confidence 6899999997543 2333 35557644 799999988878999999999999999
Q ss_pred EEEEeccCCC-CCccccEEEEEcCCCCCcEEEEEecCCCCC-CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 187 VVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 187 iyv~GG~~~~-~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~-~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
|||+||.... ....+++|+||+.+++ |+.++..+.+|. .|.+|+++++++ +||||||.++...++++|+||+.++
T Consensus 178 iyv~GG~~~~~~~~~~~v~~yD~~~~~--W~~~~~~g~~P~~~~~~~~~v~~~~-~lYvfGG~~~~~~~ndv~~yD~~t~ 254 (470)
T PLN02193 178 IYSFGGEFTPNQPIDKHLYVFDLETRT--WSISPATGDVPHLSCLGVRMVSIGS-TLYVFGGRDASRQYNGFYSFDTTTN 254 (470)
T ss_pred EEEECCcCCCCCCeeCcEEEEECCCCE--EEeCCCCCCCCCCcccceEEEEECC-EEEEECCCCCCCCCccEEEEECCCC
Confidence 9999997533 3345789999999975 998877666776 467999999998 8999999988778999999999999
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCC
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNA 344 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~ 344 (975)
+|+++.+++..|.+|..|++++ .+++||||||.+... .+++++.|++.++ +|+....++.+|.+|.+|+++++++
T Consensus 255 --~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~-~~~~~~~yd~~t~-~W~~~~~~~~~~~~R~~~~~~~~~g 329 (470)
T PLN02193 255 --EWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATA-RLKTLDSYNIVDK-KWFHCSTPGDSFSIRGGAGLEVVQG 329 (470)
T ss_pred --EEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCC-CcceEEEEECCCC-EEEeCCCCCCCCCCCCCcEEEEECC
Confidence 9999998877677777776554 689999999987654 6789999988766 4443333344578899999999999
Q ss_pred EEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCC
Q 002047 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGL 424 (975)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~ 424 (975)
+|||+||.++. ..+++++||+.+++|+++..++.. |.+|..|++++++++||||||.
T Consensus 330 kiyviGG~~g~-----~~~dv~~yD~~t~~W~~~~~~g~~------------------P~~R~~~~~~~~~~~iyv~GG~ 386 (470)
T PLN02193 330 KVWVVYGFNGC-----EVDDVHYYDPVQDKWTQVETFGVR------------------PSERSVFASAAVGKHIVIFGGE 386 (470)
T ss_pred cEEEEECCCCC-----ccCceEEEECCCCEEEEeccCCCC------------------CCCcceeEEEEECCEEEEECCc
Confidence 99999998643 268899999999999998766332 5689999999999999999997
Q ss_pred CC---------CCCccceEeeeccccc
Q 002047 425 RG---------GVLLDDLLVAEDLAAA 442 (975)
Q Consensus 425 ~~---------~~~l~Dv~~ld~~~~~ 442 (975)
.. ..+++|+|+||.....
T Consensus 387 ~~~~~~~~~~~~~~~ndv~~~D~~t~~ 413 (470)
T PLN02193 387 IAMDPLAHVGPGQLTDGTFALDTETLQ 413 (470)
T ss_pred cCCccccccCccceeccEEEEEcCcCE
Confidence 53 2467899999986543
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=304.46 Aligned_cols=309 Identities=27% Similarity=0.427 Sum_probs=257.9
Q ss_pred eeeEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEEC
Q 002047 78 VNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV 157 (975)
Q Consensus 78 ~~~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~ 157 (975)
|..+....|..|.||.||-++++ ...|++|||-+. |+.++++.|+.
T Consensus 19 WrrV~~~tGPvPrpRHGHRAVai------------kELiviFGGGNE----------------------GiiDELHvYNT 64 (830)
T KOG4152|consen 19 WRRVQQSTGPVPRPRHGHRAVAI------------KELIVIFGGGNE----------------------GIIDELHVYNT 64 (830)
T ss_pred eEEEecccCCCCCccccchheee------------eeeEEEecCCcc----------------------cchhhhhhhcc
Confidence 33455778999999999999999 678999999654 28899999999
Q ss_pred CCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEe----cCCCCCCCcccEE
Q 002047 158 LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV----QGPGPGPRYGHVM 233 (975)
Q Consensus 158 ~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~----~g~~P~~R~~h~~ 233 (975)
.+++|......|+.|.+-+.|+.++.+++||+|||+..-+.+.||+|.+.... +.|.++.+ .|..|.||-+|+.
T Consensus 65 atnqWf~PavrGDiPpgcAA~GfvcdGtrilvFGGMvEYGkYsNdLYELQasR--WeWkrlkp~~p~nG~pPCPRlGHSF 142 (830)
T KOG4152|consen 65 ATNQWFAPAVRGDIPPGCAAFGFVCDGTRILVFGGMVEYGKYSNDLYELQASR--WEWKRLKPKTPKNGPPPCPRLGHSF 142 (830)
T ss_pred ccceeecchhcCCCCCchhhcceEecCceEEEEccEeeeccccchHHHhhhhh--hhHhhcCCCCCCCCCCCCCccCcee
Confidence 99999999999999999999999999999999999998889999998766554 56988764 5789999999999
Q ss_pred EEeCCcEEEEEcCCCC---------CCCCCcEEEEECCCC--CcEEEEccCCCCCCCCcceeEEEEEe-----CCeEEEe
Q 002047 234 ALVGQRYLMAIGGNDG---------KRPLADVWALDTAAK--PYEWRKLEPEGEGPPPCMYATASARS-----DGLLLLC 297 (975)
Q Consensus 234 ~~~~~~~lyV~GG~~g---------~~~~ndv~~yDl~s~--~~~W~~v~~~~~~P~~r~~~~a~~~~-----~g~lyvf 297 (975)
..+++ +.|+|||... -.++||+|.+++.-. -..|......+..|++|-.|+|+.+. ..+||||
T Consensus 143 sl~gn-KcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRESHTAViY~eKDs~~skmvvy 221 (830)
T KOG4152|consen 143 SLVGN-KCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVIYTEKDSKKSKMVVY 221 (830)
T ss_pred EEecc-EeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCCCCcccceeEEEEeccCCcceEEEE
Confidence 99998 8999999722 246999999999743 36899999999999999999999873 2489999
Q ss_pred cCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCC----------CCCccccCCcEEE
Q 002047 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG----------GGRMVEDSSSVAV 367 (975)
Q Consensus 298 GG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~----------~~~~~~~~~dv~~ 367 (975)
||+++- .+.|+|.++.. ...|...+..|..|.||.-|+++.++++||||||+-- ......+.+.+-+
T Consensus 222 GGM~G~--RLgDLW~Ldl~-Tl~W~kp~~~G~~PlPRSLHsa~~IGnKMyvfGGWVPl~~~~~~~~~hekEWkCTssl~c 298 (830)
T KOG4152|consen 222 GGMSGC--RLGDLWTLDLD-TLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTSSLAC 298 (830)
T ss_pred cccccc--cccceeEEecc-eeecccccccCCCCCCcccccceeecceeEEecceeeeeccccccccccceeeeccceee
Confidence 999865 58999999766 4577777888999999999999999999999999721 0111245778899
Q ss_pred EECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCC-------CCCccceEeeeccc
Q 002047 368 LDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG-------GVLLDDLLVAEDLA 440 (975)
Q Consensus 368 yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~-------~~~l~Dv~~ld~~~ 440 (975)
+|+.+..|..+-.... +..-.|.+|.+|+++.++.+||+--|.+| ...+-|+|.||+..
T Consensus 299 lNldt~~W~tl~~d~~--------------ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCCkDlWyLdTek 364 (830)
T KOG4152|consen 299 LNLDTMAWETLLMDTL--------------EDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEK 364 (830)
T ss_pred eeecchheeeeeeccc--------------cccccccccccceeEEeccEEEEEeccchhhHhhccccchhhhhhhcccC
Confidence 9999999987753311 11225789999999999999999999765 47889999999755
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=306.99 Aligned_cols=277 Identities=22% Similarity=0.281 Sum_probs=214.3
Q ss_pred CCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEEC--CCCcEE
Q 002047 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV--LTNKWS 163 (975)
Q Consensus 86 ~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~--~t~~W~ 163 (975)
..+|.||..++++++ +++|||+||.. .+++|+||+ .+++|.
T Consensus 2 ~~lp~~~~~~~~~~~------------~~~vyv~GG~~-------------------------~~~~~~~d~~~~~~~W~ 44 (346)
T TIGR03547 2 PDLPVGFKNGTGAII------------GDKVYVGLGSA-------------------------GTSWYKLDLKKPSKGWQ 44 (346)
T ss_pred CCCCccccCceEEEE------------CCEEEEEcccc-------------------------CCeeEEEECCCCCCCce
Confidence 357899999988888 78999999962 246899997 578899
Q ss_pred EecCCCCCC-CCccceEEEEeCCEEEEEeccCCCC-----CccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEE-Ee
Q 002047 164 RITPFGEPP-TPRAAHVATAVGTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA-LV 236 (975)
Q Consensus 164 ~l~~~g~~P-~pR~~hsa~~~~~~iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~-~~ 236 (975)
.++++ | .+|..|++++++++|||+||..... ..++++|+||+.+++ |+.++ ..+|.+|.+|+++ ++
T Consensus 45 ~l~~~---p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~--W~~~~--~~~p~~~~~~~~~~~~ 117 (346)
T TIGR03547 45 KIADF---PGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNS--WQKLD--TRSPVGLLGASGFSLH 117 (346)
T ss_pred ECCCC---CCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCE--EecCC--CCCCCcccceeEEEEe
Confidence 99887 6 5899999999999999999985322 246899999999985 99986 2467888888887 56
Q ss_pred CCcEEEEEcCCCCCC----------------------------------CCCcEEEEECCCCCcEEEEccCCCCCCCCcc
Q 002047 237 GQRYLMAIGGNDGKR----------------------------------PLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (975)
Q Consensus 237 ~~~~lyV~GG~~g~~----------------------------------~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~ 282 (975)
++ +||++||.++.. .++++++||+.++ +|+.+.+++. +++
T Consensus 118 ~g-~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~--~W~~~~~~p~---~~r 191 (346)
T TIGR03547 118 NG-QAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTN--QWRNLGENPF---LGT 191 (346)
T ss_pred CC-EEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCC--ceeECccCCC---CcC
Confidence 66 999999986421 2478999999999 9999987643 245
Q ss_pred eeEEEEEeCCeEEEecCCCCCCCCccceEEeec--CCCCeEEEEECCCCCCCCc-------ceeeEEEeCCEEEEEcCcC
Q 002047 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGVSPSPR-------YQHAAVFVNARLHVSGGAL 353 (975)
Q Consensus 283 ~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~--~~~~~W~w~~~~g~~P~~R-------~~hs~v~~~~~L~V~GG~~ 353 (975)
.+++++..+++|||+||.........+++.|+. .++ +|...+.+ |.+| .+|++++++++|||+||.+
T Consensus 192 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y~~~~~~~---~W~~~~~m-~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~ 267 (346)
T TIGR03547 192 AGSAIVHKGNKLLLINGEIKPGLRTAEVKQYLFTGGKL---EWNKLPPL-PPPKSSSQEGLAGAFAGISNGVLLVAGGAN 267 (346)
T ss_pred CCceEEEECCEEEEEeeeeCCCccchheEEEEecCCCc---eeeecCCC-CCCCCCccccccEEeeeEECCEEEEeecCC
Confidence 667777789999999998655434455666543 333 67777765 3433 4677889999999999986
Q ss_pred CCCCc-------------cccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEE
Q 002047 354 GGGRM-------------VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420 (975)
Q Consensus 354 ~~~~~-------------~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV 420 (975)
..... ......+++||+++++|+.+..+ |.+|..+++++++++|||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~l---------------------p~~~~~~~~~~~~~~iyv 326 (346)
T TIGR03547 268 FPGAQENYKNGKLYAHEGLIKAWSSEVYALDNGKWSKVGKL---------------------PQGLAYGVSVSWNNGVLL 326 (346)
T ss_pred CCCchhhhhcCCccccCCCCceeEeeEEEecCCcccccCCC---------------------CCCceeeEEEEcCCEEEE
Confidence 32110 00124689999999999999887 558889999999999999
Q ss_pred EcCCCC-CCCccceEeee
Q 002047 421 YGGLRG-GVLLDDLLVAE 437 (975)
Q Consensus 421 ~GG~~~-~~~l~Dv~~ld 437 (975)
+||.+. +..++|++.+-
T Consensus 327 ~GG~~~~~~~~~~v~~~~ 344 (346)
T TIGR03547 327 IGGENSGGKAVTDVYLLS 344 (346)
T ss_pred EeccCCCCCEeeeEEEEE
Confidence 999775 47899998653
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=321.26 Aligned_cols=245 Identities=13% Similarity=0.151 Sum_probs=208.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+++||+.+++|..++++ |.+|..|++++++++||++||........+++++||+.++. |..++ +||.+|.
T Consensus 272 ~~v~~yd~~~~~W~~l~~m---p~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~--W~~~~---~m~~~R~ 343 (557)
T PHA02713 272 PCILVYNINTMEYSVISTI---PNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKI--HVELP---PMIKNRC 343 (557)
T ss_pred CCEEEEeCCCCeEEECCCC---CccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCe--EeeCC---CCcchhh
Confidence 4789999999999999987 88999999999999999999975444457899999999985 99988 9999999
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC-----
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS----- 304 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~----- 304 (975)
+|+++++++ +||++||.++...++++++||+.++ +|+.+++++.+ +.++++++.+++||++||.++..
T Consensus 344 ~~~~~~~~g-~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~mp~~----r~~~~~~~~~g~IYviGG~~~~~~~~~~ 416 (557)
T PHA02713 344 RFSLAVIDD-TIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDMPIA----LSSYGMCVLDQYIYIIGGRTEHIDYTSV 416 (557)
T ss_pred ceeEEEECC-EEEEECCcCCCCCCceEEEEECCCC--eEEECCCCCcc----cccccEEEECCEEEEEeCCCcccccccc
Confidence 999999998 8999999988777899999999999 99999987653 44445566799999999986431
Q ss_pred ------------CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCC
Q 002047 305 ------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (975)
Q Consensus 305 ------------~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t 372 (975)
..++.++.|++.++ +|..++++ |.+|..+++++++++|||+||.++... ..+.+++||+++
T Consensus 417 ~~~~~~~~~~~~~~~~~ve~YDP~td---~W~~v~~m-~~~r~~~~~~~~~~~IYv~GG~~~~~~---~~~~ve~Ydp~~ 489 (557)
T PHA02713 417 HHMNSIDMEEDTHSSNKVIRYDTVNN---IWETLPNF-WTGTIRPGVVSHKDDIYVVCDIKDEKN---VKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccccceEEEECCCCC---eEeecCCC-CcccccCcEEEECCEEEEEeCCCCCCc---cceeEEEecCCC
Confidence 12578999999988 78888776 689999999999999999999875332 134589999999
Q ss_pred -CeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCccceEeeeccc
Q 002047 373 -GVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 373 -~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
++|+.+..+ |.+|..+++++++++||++||+++. .++.++|...
T Consensus 490 ~~~W~~~~~m---------------------~~~r~~~~~~~~~~~iyv~Gg~~~~---~~~e~yd~~~ 534 (557)
T PHA02713 490 YNGWELITTT---------------------ESRLSALHTILHDNTIMMLHCYESY---MLQDTFNVYT 534 (557)
T ss_pred CCCeeEcccc---------------------CcccccceeEEECCEEEEEeeecce---eehhhcCccc
Confidence 899999988 6699999999999999999998873 3566666544
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=296.80 Aligned_cols=284 Identities=16% Similarity=0.196 Sum_probs=210.9
Q ss_pred CCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC--CcEEEecC
Q 002047 90 GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT--NKWSRITP 167 (975)
Q Consensus 90 ~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t--~~W~~l~~ 167 (975)
..+.+|.++++ ++.|||+||.+.....- ...| ....++++|+|+... .+|..+.+
T Consensus 2 ~~~~g~~~~~~------------~~~l~v~GG~~~~~~~~---------~~~g--~~~~~~~v~~~~~~~~~~~W~~~~~ 58 (323)
T TIGR03548 2 LGVAGCYAGII------------GDYILVAGGCNFPEDPL---------AEGG--KKKNYKGIYIAKDENSNLKWVKDGQ 58 (323)
T ss_pred CceeeEeeeEE------------CCEEEEeeccCCCCCch---------hhCC--cEEeeeeeEEEecCCCceeEEEccc
Confidence 45678888888 79999999987643100 0001 112678999996332 37999887
Q ss_pred CCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEE-EEEecCCCCCCCcccEEEEeCCcEEEEEcC
Q 002047 168 FGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGPGPRYGHVMALVGQRYLMAIGG 246 (975)
Q Consensus 168 ~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~-~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG 246 (975)
+ |.+|..|++++++++||++||.... ...+++|+||+.++. |. .+...+++|.+|..|+++++++ +|||+||
T Consensus 59 l---p~~r~~~~~~~~~~~lyviGG~~~~-~~~~~v~~~d~~~~~--w~~~~~~~~~lp~~~~~~~~~~~~~-~iYv~GG 131 (323)
T TIGR03548 59 L---PYEAAYGASVSVENGIYYIGGSNSS-ERFSSVYRITLDESK--EELICETIGNLPFTFENGSACYKDG-TLYVGGG 131 (323)
T ss_pred C---CccccceEEEEECCEEEEEcCCCCC-CCceeEEEEEEcCCc--eeeeeeEcCCCCcCccCceEEEECC-EEEEEeC
Confidence 6 8899989999999999999998543 357899999998875 62 2233448999999999999998 8999999
Q ss_pred CCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEEC
Q 002047 247 NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIA 326 (975)
Q Consensus 247 ~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~ 326 (975)
......++++|+||+.++ +|+.+++++.. ++.+++++..+++||||||.+... ..+++.|++.++ +|..+
T Consensus 132 ~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~---~r~~~~~~~~~~~iYv~GG~~~~~--~~~~~~yd~~~~---~W~~~ 201 (323)
T TIGR03548 132 NRNGKPSNKSYLFNLETQ--EWFELPDFPGE---PRVQPVCVKLQNELYVFGGGSNIA--YTDGYKYSPKKN---QWQKV 201 (323)
T ss_pred cCCCccCceEEEEcCCCC--CeeECCCCCCC---CCCcceEEEECCEEEEEcCCCCcc--ccceEEEecCCC---eeEEC
Confidence 876667899999999999 99999876432 255556677799999999986543 467899988877 56666
Q ss_pred CCC----CCCCcceeeE-EEeCCEEEEEcCcCCCCC----------------------------ccccCCcEEEEECCCC
Q 002047 327 PGV----SPSPRYQHAA-VFVNARLHVSGGALGGGR----------------------------MVEDSSSVAVLDTAAG 373 (975)
Q Consensus 327 ~g~----~P~~R~~hs~-v~~~~~L~V~GG~~~~~~----------------------------~~~~~~dv~~yD~~t~ 373 (975)
+.+ .|..+..+++ ++.+++|||+||.+.... .....+++++||+.++
T Consensus 202 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 281 (323)
T TIGR03548 202 ADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTG 281 (323)
T ss_pred CCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhCCCccccCcCceEEEEECCCC
Confidence 543 2444444554 445789999999864210 0011367999999999
Q ss_pred eEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCC-CCCCccce
Q 002047 374 VWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR-GGVLLDDL 433 (975)
Q Consensus 374 ~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~-~~~~l~Dv 433 (975)
+|+.+..++ ..+|..++++.++++|||+||.. .+.+..++
T Consensus 282 ~W~~~~~~p--------------------~~~r~~~~~~~~~~~iyv~GG~~~pg~rt~~~ 322 (323)
T TIGR03548 282 KWKSIGNSP--------------------FFARCGAALLLTGNNIFSINGELKPGVRTPDI 322 (323)
T ss_pred eeeEccccc--------------------ccccCchheEEECCEEEEEeccccCCcCCcCc
Confidence 999998662 13799999999999999999954 34555544
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=291.16 Aligned_cols=266 Identities=27% Similarity=0.479 Sum_probs=220.0
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
.+.+..-.+|.||.+.++++..- .+.|++|||....+... -+++|+|.||..+
T Consensus 55 ~~~e~~~~~PspRsn~sl~~nPe----------keELilfGGEf~ngqkT-----------------~vYndLy~Yn~k~ 107 (521)
T KOG1230|consen 55 HVVETSVPPPSPRSNPSLFANPE----------KEELILFGGEFYNGQKT-----------------HVYNDLYSYNTKK 107 (521)
T ss_pred eeeeccCCCCCCCCCcceeeccC----------cceeEEecceeecceeE-----------------EEeeeeeEEeccc
Confidence 44567778999999999998742 56899999976544321 2889999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeC-CEEEEEeccCC--C---CCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEE
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGP--A---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVM 233 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~-~~iyv~GG~~~--~---~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~ 233 (975)
+.|+++... +.|.||++|.++++. +.+|+|||.-. . .....|+|+||+.++. |+++...| .|.+|.||.|
T Consensus 108 ~eWkk~~sp-n~P~pRsshq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~trk--weql~~~g-~PS~RSGHRM 183 (521)
T KOG1230|consen 108 NEWKKVVSP-NAPPPRSSHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTRK--WEQLEFGG-GPSPRSGHRM 183 (521)
T ss_pred cceeEeccC-CCcCCCccceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccch--heeeccCC-CCCCCcccee
Confidence 999999754 369999999999997 79999999532 1 2347999999999984 99998665 7999999999
Q ss_pred EEeCCcEEEEEcCCCC----CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC-------
Q 002047 234 ALVGQRYLMAIGGNDG----KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA------- 302 (975)
Q Consensus 234 ~~~~~~~lyV~GG~~g----~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~------- 302 (975)
+++.. +|++|||+.. ..++||||+||+.+- +|+++.+.+..|.||..+...+..++.|||+||+..
T Consensus 184 vawK~-~lilFGGFhd~nr~y~YyNDvy~FdLdty--kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~ 260 (521)
T KOG1230|consen 184 VAWKR-QLILFGGFHDSNRDYIYYNDVYAFDLDTY--KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDV 260 (521)
T ss_pred EEeee-eEEEEcceecCCCceEEeeeeEEEeccce--eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhh
Confidence 99998 8999999843 346999999999887 999999988889999999999998999999999742
Q ss_pred -CCCCccceEEeecCC--CCeEEEEECC--CCCCCCcceeeEEEeCC-EEEEEcCcCCC-----CCccccCCcEEEEECC
Q 002047 303 -SSVPLASAYGLAKHR--DGRWEWAIAP--GVSPSPRYQHAAVFVNA-RLHVSGGALGG-----GRMVEDSSSVAVLDTA 371 (975)
Q Consensus 303 -~~~~l~d~~~~~~~~--~~~W~w~~~~--g~~P~~R~~hs~v~~~~-~L~V~GG~~~~-----~~~~~~~~dv~~yD~~ 371 (975)
.+...+|+|.+++.. ...|.|..+. ++.|.||.++++++..+ +-+.|||...- ......++++|.||+.
T Consensus 261 dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt 340 (521)
T KOG1230|consen 261 DKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLT 340 (521)
T ss_pred hcCceeeeeeeecCCcCCCcceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheecc
Confidence 456789999998765 4589999886 68899999999998854 89999997541 1112458999999999
Q ss_pred CCeEEEcc
Q 002047 372 AGVWCDTK 379 (975)
Q Consensus 372 t~~W~~v~ 379 (975)
.++|....
T Consensus 341 ~nrW~~~q 348 (521)
T KOG1230|consen 341 RNRWSEGQ 348 (521)
T ss_pred cchhhHhh
Confidence 99998764
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-31 Score=301.27 Aligned_cols=285 Identities=19% Similarity=0.232 Sum_probs=216.4
Q ss_pred eecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECC--C
Q 002047 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--T 159 (975)
Q Consensus 82 ~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--t 159 (975)
.....++|.||..++.+++ +++|||+||... +.+++||+. +
T Consensus 19 ~~~l~~lP~~~~~~~~~~~------------~~~iyv~gG~~~-------------------------~~~~~~d~~~~~ 61 (376)
T PRK14131 19 AEQLPDLPVPFKNGTGAID------------NNTVYVGLGSAG-------------------------TSWYKLDLNAPS 61 (376)
T ss_pred cccCCCCCcCccCCeEEEE------------CCEEEEEeCCCC-------------------------CeEEEEECCCCC
Confidence 4567789999999988887 789999999621 247899986 4
Q ss_pred CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCC-----CCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEE
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~-----~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~ 234 (975)
+.|..++++ +..+|.+|++++++++|||+||.... ....+++|+||+.+++ |+.++. ..|.+|.+|+++
T Consensus 62 ~~W~~l~~~--p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~--W~~~~~--~~p~~~~~~~~~ 135 (376)
T PRK14131 62 KGWTKIAAF--PGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNS--WQKLDT--RSPVGLAGHVAV 135 (376)
T ss_pred CCeEECCcC--CCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCE--EEeCCC--CCCCcccceEEE
Confidence 789999876 12589999999999999999998641 1346899999999975 999872 357788889888
Q ss_pred E-eCCcEEEEEcCCCCC----------------------------------CCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 235 L-VGQRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 235 ~-~~~~~lyV~GG~~g~----------------------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
+ .++ +|||+||.+.. ...+++++||+.++ +|+.+.+++ .
T Consensus 136 ~~~~~-~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~--~W~~~~~~p---~ 209 (376)
T PRK14131 136 SLHNG-KAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN--QWKNAGESP---F 209 (376)
T ss_pred EeeCC-EEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC--eeeECCcCC---C
Confidence 7 565 99999997532 12578999999999 999987653 3
Q ss_pred CcceeEEEEEeCCeEEEecCCCCCCCCccceEEee--cCCCCeEEEEECCCCCCCCc--------ceeeEEEeCCEEEEE
Q 002047 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLA--KHRDGRWEWAIAPGVSPSPR--------YQHAAVFVNARLHVS 349 (975)
Q Consensus 280 ~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~--~~~~~~W~w~~~~g~~P~~R--------~~hs~v~~~~~L~V~ 349 (975)
+++.+++++..+++|||+||.........++|.+. +.++ +|..+..+ |.+| .++.+++++++|||+
T Consensus 210 ~~~~~~a~v~~~~~iYv~GG~~~~~~~~~~~~~~~~~~~~~---~W~~~~~~-p~~~~~~~~~~~~~~~a~~~~~~iyv~ 285 (376)
T PRK14131 210 LGTAGSAVVIKGNKLWLINGEIKPGLRTDAVKQGKFTGNNL---KWQKLPDL-PPAPGGSSQEGVAGAFAGYSNGVLLVA 285 (376)
T ss_pred CCCCcceEEEECCEEEEEeeeECCCcCChhheEEEecCCCc---ceeecCCC-CCCCcCCcCCccceEeceeECCEEEEe
Confidence 34667777888999999999865554556666553 3333 67777765 3444 234467889999999
Q ss_pred cCcCCCCCc-------------cccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECC
Q 002047 350 GGALGGGRM-------------VEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGD 416 (975)
Q Consensus 350 GG~~~~~~~-------------~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~ 416 (975)
||.+..... ......+++||+++++|+.+..+ |.+|..|+++++++
T Consensus 286 GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~l---------------------p~~r~~~~av~~~~ 344 (376)
T PRK14131 286 GGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNGKWQKVGEL---------------------PQGLAYGVSVSWNN 344 (376)
T ss_pred eccCCCCChhhhhcCCcccccCCcceeehheEEecCCcccccCcC---------------------CCCccceEEEEeCC
Confidence 998642210 00112477999999999998877 56899999999999
Q ss_pred EEEEEcCCCC-CCCccceEeeeccc
Q 002047 417 LIFIYGGLRG-GVLLDDLLVAEDLA 440 (975)
Q Consensus 417 ~LyV~GG~~~-~~~l~Dv~~ld~~~ 440 (975)
+|||+||... ...++|+++++...
T Consensus 345 ~iyv~GG~~~~~~~~~~v~~~~~~~ 369 (376)
T PRK14131 345 GVLLIGGETAGGKAVSDVTLLSWDG 369 (376)
T ss_pred EEEEEcCCCCCCcEeeeEEEEEEcC
Confidence 9999999764 47899999887543
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=317.39 Aligned_cols=249 Identities=24% Similarity=0.425 Sum_probs=222.8
Q ss_pred cceeeeEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCcccccccccCcEE
Q 002047 75 YSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVH 153 (975)
Q Consensus 75 ~~~~~~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv~ 153 (975)
|.+....|.....+|.+|..|+++++ +++||++||.+. .. ..+.++
T Consensus 306 yd~~~~~w~~~a~m~~~r~~~~~~~~------------~~~lYv~GG~~~~~~---------------------~l~~ve 352 (571)
T KOG4441|consen 306 YDPKTNEWSSLAPMPSPRCRVGVAVL------------NGKLYVVGGYDSGSD---------------------RLSSVE 352 (571)
T ss_pred ecCCcCcEeecCCCCcccccccEEEE------------CCEEEEEccccCCCc---------------------ccceEE
Confidence 44555567888999999999999999 789999999984 22 789999
Q ss_pred EEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEE
Q 002047 154 CYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVM 233 (975)
Q Consensus 154 ~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~ 233 (975)
+||+.+++|+.+++| ..+|..|++++++++||++||.. +...++++++||+.++. |+.+. +|+.+|++|++
T Consensus 353 ~YD~~~~~W~~~a~M---~~~R~~~~v~~l~g~iYavGG~d-g~~~l~svE~YDp~~~~--W~~va---~m~~~r~~~gv 423 (571)
T KOG4441|consen 353 RYDPRTNQWTPVAPM---NTKRSDFGVAVLDGKLYAVGGFD-GEKSLNSVECYDPVTNK--WTPVA---PMLTRRSGHGV 423 (571)
T ss_pred EecCCCCceeccCCc---cCccccceeEEECCEEEEEeccc-cccccccEEEecCCCCc--ccccC---CCCcceeeeEE
Confidence 999999999999998 79999999999999999999996 44568899999999985 99997 99999999999
Q ss_pred EEeCCcEEEEEcCCCCCC-CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEE
Q 002047 234 ALVGQRYLMAIGGNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYG 312 (975)
Q Consensus 234 ~~~~~~~lyV~GG~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~ 312 (975)
+++++ +||++||.++.. +++++++||+.++ +|+.++++.. ++.++++++.+++||++||.++ ...+..+..
T Consensus 424 ~~~~g-~iYi~GG~~~~~~~l~sve~YDP~t~--~W~~~~~M~~----~R~~~g~a~~~~~iYvvGG~~~-~~~~~~VE~ 495 (571)
T KOG4441|consen 424 AVLGG-KLYIIGGGDGSSNCLNSVECYDPETN--TWTLIAPMNT----RRSGFGVAVLNGKIYVVGGFDG-TSALSSVER 495 (571)
T ss_pred EEECC-EEEEEcCcCCCccccceEEEEcCCCC--ceeecCCccc----ccccceEEEECCEEEEECCccC-CCccceEEE
Confidence 99998 899999999877 9999999999999 9999999988 4777778888999999999998 446777999
Q ss_pred eecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 313 LAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 313 ~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
|++.++ +|..++++ +.+|..++++++++++|++||+++... ++.+..||+++++|+....+
T Consensus 496 ydp~~~---~W~~v~~m-~~~rs~~g~~~~~~~ly~vGG~~~~~~----l~~ve~ydp~~d~W~~~~~~ 556 (571)
T KOG4441|consen 496 YDPETN---QWTMVAPM-TSPRSAVGVVVLGGKLYAVGGFDGNNN----LNTVECYDPETDTWTEVTEP 556 (571)
T ss_pred EcCCCC---ceeEcccC-ccccccccEEEECCEEEEEecccCccc----cceeEEcCCCCCceeeCCCc
Confidence 999988 78888665 689999999999999999999887654 88999999999999998874
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-31 Score=310.60 Aligned_cols=297 Identities=31% Similarity=0.517 Sum_probs=248.5
Q ss_pred ecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccC-cEEEEECCCCc
Q 002047 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATA-DVHCYDVLTNK 161 (975)
Q Consensus 83 ~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv~~yD~~t~~ 161 (975)
...+..|.+|++|+++.+ ++++|||||...... .++ |+|.||..+..
T Consensus 52 ~~~~~~p~~R~~hs~~~~------------~~~~~vfGG~~~~~~--------------------~~~~dl~~~d~~~~~ 99 (482)
T KOG0379|consen 52 DVLGVGPIPRAGHSAVLI------------GNKLYVFGGYGSGDR--------------------LTDLDLYVLDLESQL 99 (482)
T ss_pred ccCCCCcchhhccceeEE------------CCEEEEECCCCCCCc--------------------cccceeEEeecCCcc
Confidence 356789999999999999 689999999876542 222 69999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEE
Q 002047 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (975)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~l 241 (975)
|......+..|.+|++|++++++++||+|||........++++.||+.+.+ |..+.+.+..|.+|.+|+++++++ +|
T Consensus 100 w~~~~~~g~~p~~r~g~~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~t~~--W~~l~~~~~~P~~r~~Hs~~~~g~-~l 176 (482)
T KOG0379|consen 100 WTKPAATGDEPSPRYGHSLSAVGDKLYLFGGTDKKYRNLNELHSLDLSTRT--WSLLSPTGDPPPPRAGHSATVVGT-KL 176 (482)
T ss_pred cccccccCCCCCcccceeEEEECCeEEEEccccCCCCChhheEeccCCCCc--EEEecCcCCCCCCcccceEEEECC-EE
Confidence 999999999999999999999999999999997656668999999999986 999999999999999999999997 89
Q ss_pred EEEcCCCCCC-CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCe
Q 002047 242 MAIGGNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (975)
Q Consensus 242 yV~GG~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~ 320 (975)
|||||.+... .+||+|+||+.+. +|.++...+..|.||..|+++++ +++++||||.+.....++|+|.|+..+
T Consensus 177 ~vfGG~~~~~~~~ndl~i~d~~~~--~W~~~~~~g~~P~pR~gH~~~~~-~~~~~v~gG~~~~~~~l~D~~~ldl~~--- 250 (482)
T KOG0379|consen 177 VVFGGIGGTGDSLNDLHIYDLETS--TWSELDTQGEAPSPRYGHAMVVV-GNKLLVFGGGDDGDVYLNDVHILDLST--- 250 (482)
T ss_pred EEECCccCcccceeeeeeeccccc--cceecccCCCCCCCCCCceEEEE-CCeEEEEeccccCCceecceEeeeccc---
Confidence 9999998766 8999999999999 99999999999998888877776 777888888776666899999998886
Q ss_pred EEEEECC--CCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCC
Q 002047 321 WEWAIAP--GVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (975)
Q Consensus 321 W~w~~~~--g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (975)
|.|.... +..|.+|+.|+.++.+.+++|+||...... ..+.++|.||.++..|..+....
T Consensus 251 ~~W~~~~~~g~~p~~R~~h~~~~~~~~~~l~gG~~~~~~--~~l~~~~~l~~~~~~w~~~~~~~---------------- 312 (482)
T KOG0379|consen 251 WEWKLLPTGGDLPSPRSGHSLTVSGDHLLLFGGGTDPKQ--EPLGDLYGLDLETLVWSKVESVG---------------- 312 (482)
T ss_pred ceeeeccccCCCCCCcceeeeEEECCEEEEEcCCccccc--ccccccccccccccceeeeeccc----------------
Confidence 5666554 778999999999999999999999876521 24789999999999999998874
Q ss_pred CccCCCccceeEEEEECCE----EEEEcCCC-CCCCccceEeeecc
Q 002047 399 AAVELTRRCRHAAAAVGDL----IFIYGGLR-GGVLLDDLLVAEDL 439 (975)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~----LyV~GG~~-~~~~l~Dv~~ld~~ 439 (975)
...+.+|..|+++..... +.++||.. .....++++.+...
T Consensus 313 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (482)
T KOG0379|consen 313 -VVRPSPRLGHAAELIDELGKDGLGILGGNQILGERLADVFSLQIK 357 (482)
T ss_pred -cccccccccccceeeccCCccceeeecCccccccchhhccccccc
Confidence 123568999998888553 44445422 23556666655433
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=294.79 Aligned_cols=257 Identities=25% Similarity=0.404 Sum_probs=200.8
Q ss_pred CCCcEEEecCC-CCCCCCccceEEEEeCCEEEEEeccCCC-CCccccEEEEEcCCCCCcEEEEEecCCCCCC-CcccEEE
Q 002047 158 LTNKWSRITPF-GEPPTPRAAHVATAVGTMVVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP-RYGHVMA 234 (975)
Q Consensus 158 ~t~~W~~l~~~-g~~P~pR~~hsa~~~~~~iyv~GG~~~~-~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~-R~~h~~~ 234 (975)
....|.++... +..|.||.+|++++++++|||+||.... ....+++|+||+.++. |+.+++.+..|.. +.+|+++
T Consensus 5 ~~~~W~~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~p~~~~~~~~~~ 82 (341)
T PLN02153 5 LQGGWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHT--WSIAPANGDVPRISCLGVRMV 82 (341)
T ss_pred cCCeEEEecCCCCCCCCCCCcceEEEECCEEEEECCccCCCCceeCcEEEEECCCCE--EEEcCccCCCCCCccCceEEE
Confidence 45679999774 3468999999999999999999998533 3345899999999975 9998855544543 4589999
Q ss_pred EeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCC--CCCCcceeEEEEEeCCeEEEecCCCCCC-----CCc
Q 002047 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE--GPPPCMYATASARSDGLLLLCGGRDASS-----VPL 307 (975)
Q Consensus 235 ~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~--~P~~r~~~~a~~~~~g~lyvfGG~~~~~-----~~l 307 (975)
++++ +||||||.++...++++++||+.++ +|+.++++.. .|.+|..|+ +++.+++||||||.+... ..+
T Consensus 83 ~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~ 158 (341)
T PLN02153 83 AVGT-KLYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHS-MASDENHVYVFGGVSKGGLMKTPERF 158 (341)
T ss_pred EECC-EEEEECCCCCCCccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeE-EEEECCEEEEECCccCCCccCCCccc
Confidence 9998 8999999988778899999999999 9999876532 255566554 456689999999986432 235
Q ss_pred cceEEeecCCCCeEEEEECCC--CCCCCcceeeEEEeCCEEEEEcCcCCC----CCccccCCcEEEEECCCCeEEEcccC
Q 002047 308 ASAYGLAKHRDGRWEWAIAPG--VSPSPRYQHAAVFVNARLHVSGGALGG----GRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g--~~P~~R~~hs~v~~~~~L~V~GG~~~~----~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
++++.|++.++ +|..++. .+|.+|.+|++++++++|||+||.... +......+++++||+.+++|+++...
T Consensus 159 ~~v~~yd~~~~---~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~ 235 (341)
T PLN02153 159 RTIEAYNIADG---KWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETT 235 (341)
T ss_pred ceEEEEECCCC---eEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEecccc
Confidence 78899988876 5555553 346889999999999999999997531 11112367899999999999998765
Q ss_pred cCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCC---------CCCCccceEeeecccc
Q 002047 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR---------GGVLLDDLLVAEDLAA 441 (975)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~---------~~~~l~Dv~~ld~~~~ 441 (975)
+. .|.+|..|++++++++||||||.. .+.+++|+|.||....
T Consensus 236 g~------------------~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~ 286 (341)
T PLN02153 236 GA------------------KPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL 286 (341)
T ss_pred CC------------------CCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence 22 256899999999999999999963 2356789999997653
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=312.01 Aligned_cols=248 Identities=11% Similarity=0.140 Sum_probs=206.8
Q ss_pred cceeeeEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEE
Q 002047 75 YSVVNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHC 154 (975)
Q Consensus 75 ~~~~~~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~ 154 (975)
|.+....|......|.+|.+|+++++ +++|||+||...... .++++++
T Consensus 277 yd~~~~~W~~l~~mp~~r~~~~~a~l------------~~~IYviGG~~~~~~--------------------~~~~v~~ 324 (557)
T PHA02713 277 YNINTMEYSVISTIPNHIINYASAIV------------DNEIIIAGGYNFNNP--------------------SLNKVYK 324 (557)
T ss_pred EeCCCCeEEECCCCCccccceEEEEE------------CCEEEEEcCCCCCCC--------------------ccceEEE
Confidence 34444556777889999999999998 789999999753211 5689999
Q ss_pred EECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEE
Q 002047 155 YDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234 (975)
Q Consensus 155 yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~ 234 (975)
||+.+++|..++++ |.+|..|++++++++||++||.... ...+++++||+.+++ |+.++ +||.+|.+|+++
T Consensus 325 Yd~~~n~W~~~~~m---~~~R~~~~~~~~~g~IYviGG~~~~-~~~~sve~Ydp~~~~--W~~~~---~mp~~r~~~~~~ 395 (557)
T PHA02713 325 INIENKIHVELPPM---IKNRCRFSLAVIDDTIYAIGGQNGT-NVERTIECYTMGDDK--WKMLP---DMPIALSSYGMC 395 (557)
T ss_pred EECCCCeEeeCCCC---cchhhceeEEEECCEEEEECCcCCC-CCCceEEEEECCCCe--EEECC---CCCcccccccEE
Confidence 99999999999987 8999999999999999999998533 346889999999985 99988 999999999999
Q ss_pred EeCCcEEEEEcCCCCC------------------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEE
Q 002047 235 LVGQRYLMAIGGNDGK------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (975)
Q Consensus 235 ~~~~~~lyV~GG~~g~------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyv 296 (975)
++++ +|||+||.++. ..++.+++||+.++ +|+.++++..+ +..+++++.+++||+
T Consensus 396 ~~~g-~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m~~~----r~~~~~~~~~~~IYv 468 (557)
T PHA02713 396 VLDQ-YIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNFWTG----TIRPGVVSHKDDIYV 468 (557)
T ss_pred EECC-EEEEEeCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCCCcc----cccCcEEEECCEEEE
Confidence 9998 89999998642 13688999999999 99999988653 445566777999999
Q ss_pred ecCCCCCCCCccceEEeecCC-CCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 297 CGGRDASSVPLASAYGLAKHR-DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 297 fGG~~~~~~~l~d~~~~~~~~-~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+||.++.....+.++.|++.+ + +|..++.+ |.+|..+++++++++|||+||+++. ..+++||+.|++|
T Consensus 469 ~GG~~~~~~~~~~ve~Ydp~~~~---~W~~~~~m-~~~r~~~~~~~~~~~iyv~Gg~~~~-------~~~e~yd~~~~~W 537 (557)
T PHA02713 469 VCDIKDEKNVKTCIFRYNTNTYN---GWELITTT-ESRLSALHTILHDNTIMMLHCYESY-------MLQDTFNVYTYEW 537 (557)
T ss_pred EeCCCCCCccceeEEEecCCCCC---CeeEcccc-CcccccceeEEECCEEEEEeeecce-------eehhhcCcccccc
Confidence 999875443345678999998 6 56677665 7999999999999999999998762 3589999999999
Q ss_pred EEcccC
Q 002047 376 CDTKSV 381 (975)
Q Consensus 376 ~~v~~~ 381 (975)
+.+.+.
T Consensus 538 ~~~~~~ 543 (557)
T PHA02713 538 NHICHQ 543 (557)
T ss_pred cchhhh
Confidence 988765
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=266.80 Aligned_cols=229 Identities=24% Similarity=0.372 Sum_probs=204.5
Q ss_pred CCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEe
Q 002047 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (975)
Q Consensus 86 ~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l 165 (975)
...|.-|+||+.+.+ .+++||+||.+...+ .-|-+|+||++++.|++.
T Consensus 73 p~VPyqRYGHtvV~y------------~d~~yvWGGRND~eg--------------------aCN~Ly~fDp~t~~W~~p 120 (392)
T KOG4693|consen 73 PAVPYQRYGHTVVEY------------QDKAYVWGGRNDDEG--------------------ACNLLYEFDPETNVWKKP 120 (392)
T ss_pred CccchhhcCceEEEE------------cceEEEEcCccCccc--------------------ccceeeeecccccccccc
Confidence 356888999999999 799999999998765 788999999999999999
Q ss_pred cCCCCCCCCccceEEEEeCCEEEEEeccCCC-CCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEE
Q 002047 166 TPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (975)
Q Consensus 166 ~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~-~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~ 244 (975)
...|..|.+|-+|++|++++.+|||||+... ...++|++++|+.+.+ |+.+.+.|..|.=|--|+++++++ .+|||
T Consensus 121 ~v~G~vPgaRDGHsAcV~gn~MyiFGGye~~a~~FS~d~h~ld~~Tmt--Wr~~~Tkg~PprwRDFH~a~~~~~-~MYiF 197 (392)
T KOG4693|consen 121 EVEGFVPGARDGHSACVWGNQMYIFGGYEEDAQRFSQDTHVLDFATMT--WREMHTKGDPPRWRDFHTASVIDG-MMYIF 197 (392)
T ss_pred ceeeecCCccCCceeeEECcEEEEecChHHHHHhhhccceeEecccee--eeehhccCCCchhhhhhhhhhccc-eEEEe
Confidence 9999999999999999999999999998633 4457899999999976 999999999999999999999997 89999
Q ss_pred cCCCC---------CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC-CCccceEEee
Q 002047 245 GGNDG---------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLA 314 (975)
Q Consensus 245 GG~~g---------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~-~~l~d~~~~~ 314 (975)
||... ..+.+.+-.||+.+. .|......+..|..|+.|++.++ +++||+|||+++.. ..++|+|.|+
T Consensus 198 GGR~D~~gpfHs~~e~Yc~~i~~ld~~T~--aW~r~p~~~~~P~GRRSHS~fvY-ng~~Y~FGGYng~ln~HfndLy~Fd 274 (392)
T KOG4693|consen 198 GGRSDESGPFHSIHEQYCDTIMALDLATG--AWTRTPENTMKPGGRRSHSTFVY-NGKMYMFGGYNGTLNVHFNDLYCFD 274 (392)
T ss_pred ccccccCCCccchhhhhcceeEEEecccc--ccccCCCCCcCCCcccccceEEE-cceEEEecccchhhhhhhcceeecc
Confidence 99843 234677889999999 99999988889999999988877 99999999998754 4689999998
Q ss_pred cCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcC
Q 002047 315 KHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGAL 353 (975)
Q Consensus 315 ~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~ 353 (975)
+.+. .|..+.+.+.-|.+|..+++++.++++|+|||..
T Consensus 275 P~t~-~W~~I~~~Gk~P~aRRRqC~~v~g~kv~LFGGTs 312 (392)
T KOG4693|consen 275 PKTS-MWSVISVRGKYPSARRRQCSVVSGGKVYLFGGTS 312 (392)
T ss_pred cccc-hheeeeccCCCCCcccceeEEEECCEEEEecCCC
Confidence 8765 8888888899999999999999999999999964
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=273.50 Aligned_cols=218 Identities=47% Similarity=0.757 Sum_probs=173.7
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhh
Q 002047 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780 (975)
Q Consensus 701 ~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~ 780 (975)
+|||||||++.+|.++|+.++..+.+ .+||||||||||+.+.||+.+|+.++.. |.++++||||||.+.++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d------~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~ 73 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFL 73 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCC------EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhh
Confidence 58999999999999999999886554 8999999999999999999999999887 8899999999999998887
Q ss_pred cCChHHHH-----HHhCCcccchhhhhhhccccccceEEEEcc-eEEEecCCccCcccCHhhhhhccCCcccCCCCccee
Q 002047 781 FGFRIECI-----ERMGERDGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLM 854 (975)
Q Consensus 781 ~gf~~e~~-----~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~ 854 (975)
+++..+.. ..........++..+.++|..||+++.++. +++|||||+.+.....+++. .. ...+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~-~~~~~~~ 146 (225)
T cd00144 74 YGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EE-PEDQLPE 146 (225)
T ss_pred cCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cC-cccccce
Confidence 77654421 001111234567888899999999999987 99999999998865554443 11 1223678
Q ss_pred ccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCc
Q 002047 855 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNA 934 (975)
Q Consensus 855 dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ 934 (975)
+++|++|.... .....+.|+. |+++++.|++.++.++|||||+++.+|+.....+++|||+|+..|++..+|.
T Consensus 147 ~~lw~r~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~ 219 (225)
T cd00144 147 DLLWSDPLELP--GGFGSSRRGG-----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNK 219 (225)
T ss_pred eeeecCCCCCC--CCCcCCCCCC-----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCcc
Confidence 99999997532 1222333332 8999999999999999999999999998767789999999999998777777
Q ss_pred EEEEE
Q 002047 935 GAILV 939 (975)
Q Consensus 935 ga~l~ 939 (975)
.+++.
T Consensus 220 l~~~~ 224 (225)
T cd00144 220 LAALV 224 (225)
T ss_pred EEEEe
Confidence 66654
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=296.34 Aligned_cols=248 Identities=16% Similarity=0.255 Sum_probs=207.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~ 230 (975)
.+.+|+..+.+|..+... | .+..|++++++++||++||........+++++||+.+++ |..++ ++|.+|.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~---~~~~~R~~ 335 (534)
T PHA03098 265 NYITNYSPLSEINTIIDI---H-YVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKS--WNKVP---ELIYPRKN 335 (534)
T ss_pred eeeecchhhhhcccccCc---c-ccccceEEEECCEEEEECCCcCCCCeeccEEEEeCCCCe--eeECC---CCCccccc
Confidence 456788888899988644 3 345678999999999999987666667899999999985 99887 89999999
Q ss_pred cEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccce
Q 002047 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (975)
Q Consensus 231 h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~ 310 (975)
|+++++++ +||++||.++...++++++||+.++ +|+.+++++. +|.. ++++..+++||++||.......++++
T Consensus 336 ~~~~~~~~-~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~lp~---~r~~-~~~~~~~~~iYv~GG~~~~~~~~~~v 408 (534)
T PHA03098 336 PGVTVFNN-RIYVIGGIYNSISLNTVESWKPGES--KWREEPPLIF---PRYN-PCVVNVNNLIYVIGGISKNDELLKTV 408 (534)
T ss_pred ceEEEECC-EEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCcCc---CCcc-ceEEEECCEEEEECCcCCCCcccceE
Confidence 99999988 8999999987777899999999999 9999887754 3544 45566799999999986655567899
Q ss_pred EEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCC
Q 002047 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRY 390 (975)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~ 390 (975)
+.|++.++ +|...+++ |.+|.+|+++.++++|||+||.+..... ...+.+++||+++++|+.++.+
T Consensus 409 ~~yd~~t~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~-~~~~~v~~yd~~~~~W~~~~~~--------- 474 (534)
T PHA03098 409 ECFSLNTN---KWSKGSPL-PISHYGGCAIYHDGKIYVIGGISYIDNI-KVYNIVESYNPVTNKWTELSSL--------- 474 (534)
T ss_pred EEEeCCCC---eeeecCCC-CccccCceEEEECCEEEEECCccCCCCC-cccceEEEecCCCCceeeCCCC---------
Confidence 99988877 67777654 7899999999999999999998654321 2256699999999999999876
Q ss_pred ccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCccceEeeeccc
Q 002047 391 SADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 391 ~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
+.+|..|++++++++|||+||.++....++++++|...
T Consensus 475 ------------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 475 ------------NFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred ------------CcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCC
Confidence 45899999999999999999998877789999998665
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=287.67 Aligned_cols=246 Identities=31% Similarity=0.502 Sum_probs=215.2
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeccCCCCCccc-cEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEc
Q 002047 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAE-DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (975)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~-dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~G 245 (975)
..+..|.+|+.|+++.+++++|||||.+......+ |+|++|+.+. .|......|..|.+|++|+++.+++ +||+||
T Consensus 53 ~~~~~p~~R~~hs~~~~~~~~~vfGG~~~~~~~~~~dl~~~d~~~~--~w~~~~~~g~~p~~r~g~~~~~~~~-~l~lfG 129 (482)
T KOG0379|consen 53 VLGVGPIPRAGHSAVLIGNKLYVFGGYGSGDRLTDLDLYVLDLESQ--LWTKPAATGDEPSPRYGHSLSAVGD-KLYLFG 129 (482)
T ss_pred cCCCCcchhhccceeEECCEEEEECCCCCCCccccceeEEeecCCc--ccccccccCCCCCcccceeEEEECC-eEEEEc
Confidence 34557999999999999999999999865544333 6999999986 4999999999999999999999998 899999
Q ss_pred CCCC-CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEE
Q 002047 246 GNDG-KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (975)
Q Consensus 246 G~~g-~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~ 324 (975)
|.+. ...+++++.||+.+. +|..+.+.+.+|++|.+|+++++ +++||||||.+.....++|+|.|+..+. +|...
T Consensus 130 G~~~~~~~~~~l~~~d~~t~--~W~~l~~~~~~P~~r~~Hs~~~~-g~~l~vfGG~~~~~~~~ndl~i~d~~~~-~W~~~ 205 (482)
T KOG0379|consen 130 GTDKKYRNLNELHSLDLSTR--TWSLLSPTGDPPPPRAGHSATVV-GTKLVVFGGIGGTGDSLNDLHIYDLETS-TWSEL 205 (482)
T ss_pred cccCCCCChhheEeccCCCC--cEEEecCcCCCCCCcccceEEEE-CCEEEEECCccCcccceeeeeeeccccc-cceec
Confidence 9984 667999999999999 99999999998888888888777 6999999999888778999999988866 58888
Q ss_pred ECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCC
Q 002047 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELT 404 (975)
Q Consensus 325 ~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~ 404 (975)
.+.+..|.||++|+++++++++||+||.+... .+++|+|+||+.+.+|.++...+ ..|.
T Consensus 206 ~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~---~~l~D~~~ldl~~~~W~~~~~~g------------------~~p~ 264 (482)
T KOG0379|consen 206 DTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGD---VYLNDVHILDLSTWEWKLLPTGG------------------DLPS 264 (482)
T ss_pred ccCCCCCCCCCCceEEEECCeEEEEeccccCC---ceecceEeeecccceeeeccccC------------------CCCC
Confidence 88899999999999999999999999988333 35999999999999999776653 3367
Q ss_pred ccceeEEEEECCEEEEEcCCCCC-C-CccceEeeeccc
Q 002047 405 RRCRHAAAAVGDLIFIYGGLRGG-V-LLDDLLVAEDLA 440 (975)
Q Consensus 405 ~R~~hsa~~~~~~LyV~GG~~~~-~-~l~Dv~~ld~~~ 440 (975)
+|.+|+.++.+..++|+||.... . .+.|+|.|+...
T Consensus 265 ~R~~h~~~~~~~~~~l~gG~~~~~~~~l~~~~~l~~~~ 302 (482)
T KOG0379|consen 265 PRSGHSLTVSGDHLLLFGGGTDPKQEPLGDLYGLDLET 302 (482)
T ss_pred CcceeeeEEECCEEEEEcCCcccccccccccccccccc
Confidence 99999999999999999997764 3 799999999874
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=290.32 Aligned_cols=242 Identities=18% Similarity=0.251 Sum_probs=197.1
Q ss_pred ecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcE
Q 002047 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW 162 (975)
Q Consensus 83 ~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W 162 (975)
......|. +..|+++++ +++||++||...... ..+++++||+.+++|
T Consensus 277 ~~~~~~~~-~~~~~~~~~------------~~~lyv~GG~~~~~~--------------------~~~~v~~yd~~~~~W 323 (534)
T PHA03098 277 NTIIDIHY-VYCFGSVVL------------NNVIYFIGGMNKNNL--------------------SVNSVVSYDTKTKSW 323 (534)
T ss_pred ccccCccc-cccceEEEE------------CCEEEEECCCcCCCC--------------------eeccEEEEeCCCCee
Confidence 33333343 445677777 789999999865331 567999999999999
Q ss_pred EEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEE
Q 002047 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242 (975)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~ly 242 (975)
..++.+ |.+|.+|++++++++||++||.. .....+++++||+.+++ |+.++ ++|.+|++|+++.+++ +||
T Consensus 324 ~~~~~~---~~~R~~~~~~~~~~~lyv~GG~~-~~~~~~~v~~yd~~~~~--W~~~~---~lp~~r~~~~~~~~~~-~iY 393 (534)
T PHA03098 324 NKVPEL---IYPRKNPGVTVFNNRIYVIGGIY-NSISLNTVESWKPGESK--WREEP---PLIFPRYNPCVVNVNN-LIY 393 (534)
T ss_pred eECCCC---CcccccceEEEECCEEEEEeCCC-CCEecceEEEEcCCCCc--eeeCC---CcCcCCccceEEEECC-EEE
Confidence 999876 78999999999999999999986 34457899999999875 99887 8999999999999988 899
Q ss_pred EEcCCCC-CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC--CCccceEEeecCCCC
Q 002047 243 AIGGNDG-KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS--VPLASAYGLAKHRDG 319 (975)
Q Consensus 243 V~GG~~g-~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~--~~l~d~~~~~~~~~~ 319 (975)
|+||... ...++++++||+.++ +|+.+.+++. +|..| +++..+++||++||.+... ..++.++.|++.++
T Consensus 394 v~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~---~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~- 466 (534)
T PHA03098 394 VIGGISKNDELLKTVECFSLNTN--KWSKGSPLPI---SHYGG-CAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN- 466 (534)
T ss_pred EECCcCCCCcccceEEEEeCCCC--eeeecCCCCc---cccCc-eEEEECCEEEEECCccCCCCCcccceEEEecCCCC-
Confidence 9999743 445799999999999 9999887643 35544 4566699999999986543 23567999998877
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
+|...+.+ |.+|..++++.++++|||+||.+.... .+++++||+++++|..+..+
T Consensus 467 --~W~~~~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~ 521 (534)
T PHA03098 467 --KWTELSSL-NFPRINASLCIFNNKIYVVGGDKYEYY----INEIEVYDDKTNTWTLFCKF 521 (534)
T ss_pred --ceeeCCCC-CcccccceEEEECCEEEEEcCCcCCcc----cceeEEEeCCCCEEEecCCC
Confidence 77777755 688999999999999999999876432 67899999999999998775
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=261.88 Aligned_cols=226 Identities=18% Similarity=0.206 Sum_probs=182.3
Q ss_pred eecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCc
Q 002047 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (975)
Q Consensus 82 ~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (975)
|.....+|.||..|+++++ +++||++||..... .++++++||+.+++
T Consensus 53 W~~~~~lp~~r~~~~~~~~------------~~~lyviGG~~~~~---------------------~~~~v~~~d~~~~~ 99 (323)
T TIGR03548 53 WVKDGQLPYEAAYGASVSV------------ENGIYYIGGSNSSE---------------------RFSSVYRITLDESK 99 (323)
T ss_pred EEEcccCCccccceEEEEE------------CCEEEEEcCCCCCC---------------------CceeEEEEEEcCCc
Confidence 4566788999998888888 78999999976432 57899999999999
Q ss_pred E----EEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC-CCCcccEEEEe
Q 002047 162 W----SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALV 236 (975)
Q Consensus 162 W----~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P-~~R~~h~~~~~ 236 (975)
| +.++++ |.+|..|++++++++|||+||... +...+++++||+.+++ |+.++ ++| .+|..|+++++
T Consensus 100 w~~~~~~~~~l---p~~~~~~~~~~~~~~iYv~GG~~~-~~~~~~v~~yd~~~~~--W~~~~---~~p~~~r~~~~~~~~ 170 (323)
T TIGR03548 100 EELICETIGNL---PFTFENGSACYKDGTLYVGGGNRN-GKPSNKSYLFNLETQE--WFELP---DFPGEPRVQPVCVKL 170 (323)
T ss_pred eeeeeeEcCCC---CcCccCceEEEECCEEEEEeCcCC-CccCceEEEEcCCCCC--eeECC---CCCCCCCCcceEEEE
Confidence 8 455544 899999999999999999999743 3347899999999875 99987 677 47999999889
Q ss_pred CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCC--CCCCcceeEEEEEeCCeEEEecCCCCCC----------
Q 002047 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE--GPPPCMYATASARSDGLLLLCGGRDASS---------- 304 (975)
Q Consensus 237 ~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~--~P~~r~~~~a~~~~~g~lyvfGG~~~~~---------- 304 (975)
++ +|||+||.++.. ..++++||+.++ +|+.+.++.. .|..+..++++++.+++|||+||.+...
T Consensus 171 ~~-~iYv~GG~~~~~-~~~~~~yd~~~~--~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 246 (323)
T TIGR03548 171 QN-ELYVFGGGSNIA-YTDGYKYSPKKN--QWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLAT 246 (323)
T ss_pred CC-EEEEEcCCCCcc-ccceEEEecCCC--eeEECCCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhh
Confidence 88 899999987643 468999999999 9999988753 2333445666677789999999986431
Q ss_pred ---------------------CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCC
Q 002047 305 ---------------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG 356 (975)
Q Consensus 305 ---------------------~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~ 356 (975)
...++++.|++.++ +|..++.++..+|..++++.++++|||+||....+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~pg 316 (323)
T TIGR03548 247 MKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTG---KWKSIGNSPFFARCGAALLLTGNNIFSINGELKPG 316 (323)
T ss_pred ccchhhhhhHHHHhCCCccccCcCceEEEEECCCC---eeeEcccccccccCchheEEECCEEEEEeccccCC
Confidence 01356899999888 77777765446899999999999999999986554
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-26 Score=268.34 Aligned_cols=207 Identities=17% Similarity=0.262 Sum_probs=174.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||++||..... ..+.+++||+.+++|..++++ |.+|..+++++++++||++||
T Consensus 271 ~~~lyviGG~~~~~---------------------~~~~v~~Ydp~~~~W~~~~~m---~~~r~~~~~v~~~~~iYviGG 326 (480)
T PHA02790 271 GEVVYLIGGWMNNE---------------------IHNNAIAVNYISNNWIPIPPM---NSPRLYASGVPANNKLYVVGG 326 (480)
T ss_pred CCEEEEEcCCCCCC---------------------cCCeEEEEECCCCEEEECCCC---CchhhcceEEEECCEEEEECC
Confidence 78999999975422 567899999999999999988 789999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
... .+++++||+.+++ |..++ +||.+|.+|+++++++ +|||+||.++. .+.+++||+.++ +|+.++
T Consensus 327 ~~~----~~sve~ydp~~n~--W~~~~---~l~~~r~~~~~~~~~g-~IYviGG~~~~--~~~ve~ydp~~~--~W~~~~ 392 (480)
T PHA02790 327 LPN----PTSVERWFHGDAA--WVNMP---SLLKPRCNPAVASINN-VIYVIGGHSET--DTTTEYLLPNHD--QWQFGP 392 (480)
T ss_pred cCC----CCceEEEECCCCe--EEECC---CCCCCCcccEEEEECC-EEEEecCcCCC--CccEEEEeCCCC--EEEeCC
Confidence 742 2579999998875 99988 9999999999999998 89999998654 378999999999 999998
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCc
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGA 352 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~ 352 (975)
+++.+ |.. +++++.+++||++||. ...|++.++ +|...+++ |.+|..+++++++++|||+||+
T Consensus 393 ~m~~~---r~~-~~~~~~~~~IYv~GG~---------~e~ydp~~~---~W~~~~~m-~~~r~~~~~~v~~~~IYviGG~ 455 (480)
T PHA02790 393 STYYP---HYK-SCALVFGRRLFLVGRN---------AEFYCESSN---TWTLIDDP-IYPRDNPELIIVDNKLLLIGGF 455 (480)
T ss_pred CCCCc---ccc-ceEEEECCEEEEECCc---------eEEecCCCC---cEeEcCCC-CCCccccEEEEECCEEEEECCc
Confidence 87653 444 4556779999999983 356777766 66777765 6899999999999999999998
Q ss_pred CCCCCccccCCcEEEEECCCCeEEEc
Q 002047 353 LGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 353 ~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
++.. ..+.+++||+++++|+..
T Consensus 456 ~~~~----~~~~ve~Yd~~~~~W~~~ 477 (480)
T PHA02790 456 YRGS----YIDTIEVYNNRTYSWNIW 477 (480)
T ss_pred CCCc----ccceEEEEECCCCeEEec
Confidence 7533 257799999999999764
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=255.47 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=184.2
Q ss_pred ecCCCCC-CCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCc
Q 002047 83 EKKEDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (975)
Q Consensus 83 ~~~~~~P-~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (975)
......| .||.+|+++++ +++||||||........ ....++++|+||+.+++
T Consensus 65 ~~l~~~p~~~r~~~~~v~~------------~~~IYV~GG~~~~~~~~---------------~~~~~~~v~~YD~~~n~ 117 (376)
T PRK14131 65 TKIAAFPGGPREQAVAAFI------------DGKLYVFGGIGKTNSEG---------------SPQVFDDVYKYDPKTNS 117 (376)
T ss_pred EECCcCCCCCcccceEEEE------------CCEEEEEcCCCCCCCCC---------------ceeEcccEEEEeCCCCE
Confidence 3445556 58999999988 78999999986411000 00157899999999999
Q ss_pred EEEecCCCCCCCCccceEEEE-eCCEEEEEeccCCCC---------------------------------CccccEEEEE
Q 002047 162 WSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAG---------------------------------LSAEDLHVLD 207 (975)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~-~~~~iyv~GG~~~~~---------------------------------~~~~dv~~yD 207 (975)
|+.++.. .|.+|.+|++++ .+++||++||..... ...+++++||
T Consensus 118 W~~~~~~--~p~~~~~~~~~~~~~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD 195 (376)
T PRK14131 118 WQKLDTR--SPVGLAGHVAVSLHNGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYD 195 (376)
T ss_pred EEeCCCC--CCCcccceEEEEeeCCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEE
Confidence 9999853 377788888887 799999999975310 0247899999
Q ss_pred cCCCCCcEEEEEecCCCCC-CCcccEEEEeCCcEEEEEcCCCCC-CCCCcEEE--EECCCCCcEEEEccCCCCCCC---C
Q 002047 208 LTQQRPRWHRVVVQGPGPG-PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWA--LDTAAKPYEWRKLEPEGEGPP---P 280 (975)
Q Consensus 208 ~~t~~~~W~~v~~~g~~P~-~R~~h~~~~~~~~~lyV~GG~~g~-~~~ndv~~--yDl~s~~~~W~~v~~~~~~P~---~ 280 (975)
+.+++ |+.+. ++|. +|.+|+++.+++ +|||+||.... ....++|. ||+.++ +|+.+.+++.++. +
T Consensus 196 ~~t~~--W~~~~---~~p~~~~~~~a~v~~~~-~iYv~GG~~~~~~~~~~~~~~~~~~~~~--~W~~~~~~p~~~~~~~~ 267 (376)
T PRK14131 196 PSTNQ--WKNAG---ESPFLGTAGSAVVIKGN-KLWLINGEIKPGLRTDAVKQGKFTGNNL--KWQKLPDLPPAPGGSSQ 267 (376)
T ss_pred CCCCe--eeECC---cCCCCCCCcceEEEECC-EEEEEeeeECCCcCChhheEEEecCCCc--ceeecCCCCCCCcCCcC
Confidence 99985 99876 7885 788999988887 89999997532 23455554 566777 9999998765321 1
Q ss_pred -cceeEEEEEeCCeEEEecCCCCCCC----------------CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeC
Q 002047 281 -CMYATASARSDGLLLLCGGRDASSV----------------PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVN 343 (975)
Q Consensus 281 -r~~~~a~~~~~g~lyvfGG~~~~~~----------------~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~ 343 (975)
++.++.+++.+++|||+||.+.... ....+..|++.++ +|.....+ |.+|..++++.++
T Consensus 268 ~~~~~~~a~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~r~~~~av~~~ 343 (376)
T PRK14131 268 EGVAGAFAGYSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNG---KWQKVGEL-PQGLAYGVSVSWN 343 (376)
T ss_pred CccceEeceeECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCC---cccccCcC-CCCccceEEEEeC
Confidence 1233445677999999999863210 0123456777766 56666554 7899999999999
Q ss_pred CEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
++|||+||...... ..++|++|+++.+.|+.
T Consensus 344 ~~iyv~GG~~~~~~---~~~~v~~~~~~~~~~~~ 374 (376)
T PRK14131 344 NGVLLIGGETAGGK---AVSDVTLLSWDGKKLTV 374 (376)
T ss_pred CEEEEEcCCCCCCc---EeeeEEEEEEcCCEEEE
Confidence 99999999865432 37899999999988865
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-25 Score=248.49 Aligned_cols=222 Identities=18% Similarity=0.255 Sum_probs=169.2
Q ss_pred CCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC-CCCcccEEEEeCCcEEEEEcCCCC
Q 002047 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVGQRYLMAIGGNDG 249 (975)
Q Consensus 171 ~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P-~~R~~h~~~~~~~~~lyV~GG~~g 249 (975)
+|.+|..+++++++++|||+||.. .+++++||+...+.+|..++ +|| .+|..|+++++++ +|||+||.+.
T Consensus 4 lp~~~~~~~~~~~~~~vyv~GG~~-----~~~~~~~d~~~~~~~W~~l~---~~p~~~R~~~~~~~~~~-~iYv~GG~~~ 74 (346)
T TIGR03547 4 LPVGFKNGTGAIIGDKVYVGLGSA-----GTSWYKLDLKKPSKGWQKIA---DFPGGPRNQAVAAAIDG-KLYVFGGIGK 74 (346)
T ss_pred CCccccCceEEEECCEEEEEcccc-----CCeeEEEECCCCCCCceECC---CCCCCCcccceEEEECC-EEEEEeCCCC
Confidence 488999999999999999999973 26799999854334699998 888 5899999999998 8999999854
Q ss_pred C------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC-------------------
Q 002047 250 K------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS------------------- 304 (975)
Q Consensus 250 ~------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~------------------- 304 (975)
. ..++++|+||+.++ +|+.++.. .|..+..++++++.+++||++||.+...
T Consensus 75 ~~~~~~~~~~~~v~~Yd~~~~--~W~~~~~~--~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (346)
T TIGR03547 75 ANSEGSPQVFDDVYRYDPKKN--SWQKLDTR--SPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAADKDSEPKD 150 (346)
T ss_pred CCCCCcceecccEEEEECCCC--EEecCCCC--CCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhcCccchhhh
Confidence 2 25789999999999 99999732 2334455555557899999999986421
Q ss_pred --------------CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEE-
Q 002047 305 --------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLD- 369 (975)
Q Consensus 305 --------------~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD- 369 (975)
..+++++.|++.++ +|..++.++..+|.+|++++++++|||+||...... ...+++.||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~YDp~t~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~y~~ 224 (346)
T TIGR03547 151 KLIAAYFSQPPEDYFWNKNVLSYDPSTN---QWRNLGENPFLGTAGSAIVHKGNKLLLINGEIKPGL---RTAEVKQYLF 224 (346)
T ss_pred hhHHHHhCCChhHcCccceEEEEECCCC---ceeECccCCCCcCCCceEEEECCEEEEEeeeeCCCc---cchheEEEEe
Confidence 01478999999887 777777664357899999999999999999864332 134566665
Q ss_pred -CCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCC
Q 002047 370 -TAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLR 425 (975)
Q Consensus 370 -~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~ 425 (975)
+++++|+.+..++.+.. ..+..|..|++++++++|||+||.+
T Consensus 225 ~~~~~~W~~~~~m~~~r~--------------~~~~~~~~~~a~~~~~~Iyv~GG~~ 267 (346)
T TIGR03547 225 TGGKLEWNKLPPLPPPKS--------------SSQEGLAGAFAGISNGVLLVAGGAN 267 (346)
T ss_pred cCCCceeeecCCCCCCCC--------------CccccccEEeeeEECCEEEEeecCC
Confidence 57789999988833210 0012456787889999999999975
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-25 Score=238.36 Aligned_cols=245 Identities=23% Similarity=0.379 Sum_probs=198.6
Q ss_pred CCCCCccceEEEEeC--CEEEEEeccCCCCC---ccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEE
Q 002047 170 EPPTPRAAHVATAVG--TMVVIQGGIGPAGL---SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (975)
Q Consensus 170 ~~P~pR~~hsa~~~~--~~iyv~GG~~~~~~---~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~ 244 (975)
.+|+||.+.++++.. +.|++|||.-..+. ..+|+|+||+.+++ |+.+... ..|.||++|.++++..+.+|+|
T Consensus 62 ~~PspRsn~sl~~nPekeELilfGGEf~ngqkT~vYndLy~Yn~k~~e--Wkk~~sp-n~P~pRsshq~va~~s~~l~~f 138 (521)
T KOG1230|consen 62 PPPSPRSNPSLFANPEKEELILFGGEFYNGQKTHVYNDLYSYNTKKNE--WKKVVSP-NAPPPRSSHQAVAVPSNILWLF 138 (521)
T ss_pred CCCCCCCCcceeeccCcceeEEecceeecceeEEEeeeeeEEeccccc--eeEeccC-CCcCCCccceeEEeccCeEEEe
Confidence 368999999999873 48999999654432 47999999999986 9988633 5689999999999986699999
Q ss_pred cCCCC----C--CCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC---CCCCccceEEeec
Q 002047 245 GGNDG----K--RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA---SSVPLASAYGLAK 315 (975)
Q Consensus 245 GG~~g----~--~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~---~~~~l~d~~~~~~ 315 (975)
||.-. . ..+.|+|.||+.++ +|+++...+ .|.+|..|-+++. ..+|+||||... +..++||+|+|+.
T Consensus 139 GGEfaSPnq~qF~HYkD~W~fd~~tr--kweql~~~g-~PS~RSGHRMvaw-K~~lilFGGFhd~nr~y~YyNDvy~FdL 214 (521)
T KOG1230|consen 139 GGEFASPNQEQFHHYKDLWLFDLKTR--KWEQLEFGG-GPSPRSGHRMVAW-KRQLILFGGFHDSNRDYIYYNDVYAFDL 214 (521)
T ss_pred ccccCCcchhhhhhhhheeeeeeccc--hheeeccCC-CCCCCccceeEEe-eeeEEEEcceecCCCceEEeeeeEEEec
Confidence 99732 1 23789999999999 999998777 5788888877776 889999999733 3357899999976
Q ss_pred CCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCC-----ccccCCcEEEEECCC-----CeEEEcccCcCC
Q 002047 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-----MVEDSSSVAVLDTAA-----GVWCDTKSVVTS 384 (975)
Q Consensus 316 ~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~-----~~~~~~dv~~yD~~t-----~~W~~v~~~~~~ 384 (975)
. ..+|...+.++.-|.+|.+|...+. .+.|||+||++.... .....+|+|.++++. .+|.++...+.+
T Consensus 215 d-tykW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~k 293 (521)
T KOG1230|consen 215 D-TYKWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVK 293 (521)
T ss_pred c-ceeeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCcceeEeeccCCCCC
Confidence 6 4467666676777999999999998 999999999853210 112378999999999 799999987554
Q ss_pred CCCCCCccccCCCCCccCCCccceeEEEEECC-EEEEEcCCCC---------CCCccceEeeeccc
Q 002047 385 PRTGRYSADAAGGDAAVELTRRCRHAAAAVGD-LIFIYGGLRG---------GVLLDDLLVAEDLA 440 (975)
Q Consensus 385 p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~-~LyV~GG~~~---------~~~l~Dv~~ld~~~ 440 (975)
|.+|.++++++..+ +-+.|||... +.++||+|.+|+..
T Consensus 294 ------------------PspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt~ 341 (521)
T KOG1230|consen 294 ------------------PSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLTR 341 (521)
T ss_pred ------------------CCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheeccc
Confidence 67999999999955 9999999543 47899999999765
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=256.44 Aligned_cols=205 Identities=18% Similarity=0.298 Sum_probs=172.9
Q ss_pred EEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEE
Q 002047 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (975)
Q Consensus 180 a~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~y 259 (975)
++.+++.||++||.... ...+++++||+.+++ |..++ +||.+|..++++.+++ +||++||.++. +++++|
T Consensus 267 ~~~~~~~lyviGG~~~~-~~~~~v~~Ydp~~~~--W~~~~---~m~~~r~~~~~v~~~~-~iYviGG~~~~---~sve~y 336 (480)
T PHA02790 267 STHVGEVVYLIGGWMNN-EIHNNAIAVNYISNN--WIPIP---PMNSPRLYASGVPANN-KLYVVGGLPNP---TSVERW 336 (480)
T ss_pred eEEECCEEEEEcCCCCC-CcCCeEEEEECCCCE--EEECC---CCCchhhcceEEEECC-EEEEECCcCCC---CceEEE
Confidence 34589999999997533 356789999999975 99998 8999999999999988 89999998642 679999
Q ss_pred ECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeE
Q 002047 260 DTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (975)
Q Consensus 260 Dl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~ 339 (975)
|+.++ +|..+++++.+ +.++++++.+|+||++||.+.. .+.+..|++.++ +|...+++ |.+|..|++
T Consensus 337 dp~~n--~W~~~~~l~~~----r~~~~~~~~~g~IYviGG~~~~---~~~ve~ydp~~~---~W~~~~~m-~~~r~~~~~ 403 (480)
T PHA02790 337 FHGDA--AWVNMPSLLKP----RCNPAVASINNVIYVIGGHSET---DTTTEYLLPNHD---QWQFGPST-YYPHYKSCA 403 (480)
T ss_pred ECCCC--eEEECCCCCCC----CcccEEEEECCEEEEecCcCCC---CccEEEEeCCCC---EEEeCCCC-CCccccceE
Confidence 99999 99999887652 4455666779999999998643 356788888877 77777765 689999999
Q ss_pred EEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEE
Q 002047 340 VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIF 419 (975)
Q Consensus 340 v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~Ly 419 (975)
++++++|||+||. +++||+++++|+.++++ +.+|..+++++++++||
T Consensus 404 ~~~~~~IYv~GG~------------~e~ydp~~~~W~~~~~m---------------------~~~r~~~~~~v~~~~IY 450 (480)
T PHA02790 404 LVFGRRLFLVGRN------------AEFYCESSNTWTLIDDP---------------------IYPRDNPELIIVDNKLL 450 (480)
T ss_pred EEECCEEEEECCc------------eEEecCCCCcEeEcCCC---------------------CCCccccEEEEECCEEE
Confidence 9999999999983 56899999999999888 56899999999999999
Q ss_pred EEcCCCCCCCccceEeeeccc
Q 002047 420 IYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 420 V~GG~~~~~~l~Dv~~ld~~~ 440 (975)
|+||+++...++.++++|...
T Consensus 451 viGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 451 LIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred EECCcCCCcccceEEEEECCC
Confidence 999988766678899988654
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=243.30 Aligned_cols=255 Identities=25% Similarity=0.373 Sum_probs=202.1
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..-...|+.|.+-..|.++.. |.+||+|||....+. ++||+|.+....
T Consensus 70 f~PavrGDiPpgcAA~Gfvcd------------GtrilvFGGMvEYGk--------------------YsNdLYELQasR 117 (830)
T KOG4152|consen 70 FAPAVRGDIPPGCAAFGFVCD------------GTRILVFGGMVEYGK--------------------YSNDLYELQASR 117 (830)
T ss_pred ecchhcCCCCCchhhcceEec------------CceEEEEccEeeecc--------------------ccchHHHhhhhh
Confidence 334567999999999998887 799999999876543 889999999999
Q ss_pred CcEEEecC----CCCCCCCccceEEEEeCCEEEEEeccCCC--------CCccccEEEEEcCCC--CCcEEEEEecCCCC
Q 002047 160 NKWSRITP----FGEPPTPRAAHVATAVGTMVVIQGGIGPA--------GLSAEDLHVLDLTQQ--RPRWHRVVVQGPGP 225 (975)
Q Consensus 160 ~~W~~l~~----~g~~P~pR~~hsa~~~~~~iyv~GG~~~~--------~~~~~dv~~yD~~t~--~~~W~~v~~~g~~P 225 (975)
-.|+++.+ .|.+|.||.+|+..+++++-|+|||...+ ..+++|+|++.+.-. ...|......|.+|
T Consensus 118 WeWkrlkp~~p~nG~pPCPRlGHSFsl~gnKcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P 197 (830)
T KOG4152|consen 118 WEWKRLKPKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLP 197 (830)
T ss_pred hhHhhcCCCCCCCCCCCCCccCceeEEeccEeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCC
Confidence 99999854 46789999999999999999999997432 235899999999843 23599999999999
Q ss_pred CCCcccEEEEeC-----CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 226 GPRYGHVMALVG-----QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 226 ~~R~~h~~~~~~-----~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
.+|..|+++++- ..++||+||..|. .+.|+|.+|+.+. .|.+..-.+..|-||..|++..+ +++||||||+
T Consensus 198 ~pRESHTAViY~eKDs~~skmvvyGGM~G~-RLgDLW~Ldl~Tl--~W~kp~~~G~~PlPRSLHsa~~I-GnKMyvfGGW 273 (830)
T KOG4152|consen 198 PPRESHTAVIYTEKDSKKSKMVVYGGMSGC-RLGDLWTLDLDTL--TWNKPSLSGVAPLPRSLHSATTI-GNKMYVFGGW 273 (830)
T ss_pred CCcccceeEEEEeccCCcceEEEEcccccc-cccceeEEeccee--ecccccccCCCCCCcccccceee-cceeEEecce
Confidence 999999999981 2389999999874 4899999999998 99999999999999999988877 9999999997
Q ss_pred CCC-------------CCCccceEEeecCCCCeEEEEECC----CCCCCCcceeeEEEeCCEEEEEcCcCCCCCc---cc
Q 002047 301 DAS-------------SVPLASAYGLAKHRDGRWEWAIAP----GVSPSPRYQHAAVFVNARLHVSGGALGGGRM---VE 360 (975)
Q Consensus 301 ~~~-------------~~~l~d~~~~~~~~~~~W~w~~~~----g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~---~~ 360 (975)
-.. ..+.+.+-+++..+. .|+-.... ...|.+|.+|+++.++.+|||..|+++.... .-
T Consensus 274 VPl~~~~~~~~~hekEWkCTssl~clNldt~-~W~tl~~d~~ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQV 352 (830)
T KOG4152|consen 274 VPLVMDDVKVATHEKEWKCTSSLACLNLDTM-AWETLLMDTLEDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQV 352 (830)
T ss_pred eeeeccccccccccceeeeccceeeeeecch-heeeeeeccccccccccccccceeEEeccEEEEEeccchhhHhhcccc
Confidence 211 122333444444433 55433332 2368999999999999999999999875321 12
Q ss_pred cCCcEEEEECC
Q 002047 361 DSSSVAVLDTA 371 (975)
Q Consensus 361 ~~~dv~~yD~~ 371 (975)
+..|+|++|++
T Consensus 353 CCkDlWyLdTe 363 (830)
T KOG4152|consen 353 CCKDLWYLDTE 363 (830)
T ss_pred chhhhhhhccc
Confidence 45778888764
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-22 Score=216.70 Aligned_cols=131 Identities=23% Similarity=0.366 Sum_probs=98.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCC---ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGD---IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~---~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
+++.||||||||++.|.++|+++++....+. ....++||||||||||++|+|||.+|++|. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 4689999999999999999999987421100 001179999999999999999999999885 44689999999999
Q ss_pred cchhhhcCC-------hHHHHHHhCCc---ccchhhhhhhccccccceEEEE-cceEEEecCCccCc
Q 002047 775 ADINALFGF-------RIECIERMGER---DGIWAWHRINRLFNWLPLAALI-EKKIICMHGGIGRS 830 (975)
Q Consensus 775 ~~~~~~~gf-------~~e~~~~~g~~---~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~~~ 830 (975)
++++...+- ..+....|... ....+++.+.++|+.||++..+ .++++|||||+.+.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 887755331 12233333221 1234667888999999999876 46899999999876
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-22 Score=208.58 Aligned_cols=185 Identities=21% Similarity=0.363 Sum_probs=130.2
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhhc---CCCCEEEEecccccc
Q 002047 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKVE---YPNNVHLIRGNHEAA 775 (975)
Q Consensus 701 ~vvGDiHG~~~~L~~ll~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~---~P~~v~llrGNHE~~ 775 (975)
+||||||||+..|.++|+.+++......+ ....+||+|||||||+++.|||.+|++|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999998864322111 1127999999999999999999999999754 456899999999999
Q ss_pred chhhhcCChH-HHHHHhCCc--ccchhh---hhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCC
Q 002047 776 DINALFGFRI-ECIERMGER--DGIWAW---HRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAG 849 (975)
Q Consensus 776 ~~~~~~gf~~-e~~~~~g~~--~~~~~~---~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~ 849 (975)
.++..+.+.. +....+... ....++ ..+.+++..||+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 8875443321 111111100 001122 23467899999998887 58889999932
Q ss_pred CcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEecc
Q 002047 850 SIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSA 924 (975)
Q Consensus 850 ~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa 924 (975)
+|+.... .+... ..-+.+.++++|+.++.++||+||+.++.|....++|++|+|.+.
T Consensus 140 -------~w~r~y~-------~~~~~----~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 -------LWYRGYS-------KETSD----KECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred -------HHhhHhh-------hhhhh----ccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 2321110 00000 011336788999999999999999999988877899999999873
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-21 Score=208.43 Aligned_cols=206 Identities=18% Similarity=0.315 Sum_probs=138.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
|+++||||||||+..|.++|+++++.+..+ .++|||||||||++|+|||.+|+++ +.++++|+||||.+.+
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D-----~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll 71 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKD-----TLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLL 71 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCC-----EEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHH
Confidence 468999999999999999999998754332 7999999999999999999999987 3579999999999988
Q ss_pred hhhcCChHH----HHHHhCCcccchhhhhhhccccccceEEEE-cceEEEecCCccCcccCHhhhhh----ccCCcccCC
Q 002047 778 NALFGFRIE----CIERMGERDGIWAWHRINRLFNWLPLAALI-EKKIICMHGGIGRSINHVEQIEN----LQRPITMEA 848 (975)
Q Consensus 778 ~~~~gf~~e----~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~~~~~~~~~i~~----i~rp~~~~~ 848 (975)
...+|+... ....+- .....+.+.++++.||+...+ ++++++|||||+|.+ ++++... ++..+..+.
T Consensus 72 ~~~~g~~~~~~~~~l~~~l---~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~-~~~~~~~~a~eve~~l~~~~ 147 (275)
T PRK00166 72 AVAAGIKRNKKKDTLDPIL---EAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW-DLATALALAREVEAVLRSDD 147 (275)
T ss_pred HhhcCCccccchhHHHHHH---ccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCc
Confidence 877765321 111110 112335577889999998776 668999999999975 3333221 112222222
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHH--HHHHcC-----------------------------Ce
Q 002047 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME--FCNNND-----------------------------LQ 897 (975)
Q Consensus 849 ~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~--fl~~~~-----------------------------l~ 897 (975)
...++..+.|+.|.. |.++..|.....|--.++.+ ||...| -.
T Consensus 148 ~~~~~~~my~~~p~~------W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~ 221 (275)
T PRK00166 148 YRDFLANMYGNEPDR------WSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDY 221 (275)
T ss_pred HHHHHHHhcCCCcCc------cCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCC
Confidence 122566677766753 55555554433344333322 344333 33
Q ss_pred EEEEeccccccceEEecCCeEEEEecc
Q 002047 898 LIVRAHECVMDGFERFAQGHLITLFSA 924 (975)
Q Consensus 898 ~iiR~H~~~~~G~~~~~~~~~iTvfSa 924 (975)
.||-||-....|... ...++.|=+.
T Consensus 222 ~i~fGHwa~l~G~~~--~~~~~~LDtG 246 (275)
T PRK00166 222 TIVFGHWAALEGLTT--PPNIIALDTG 246 (275)
T ss_pred eEEEecCcccCCccC--CCCeEEeecc
Confidence 689999998778765 4556776544
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-21 Score=210.63 Aligned_cols=177 Identities=20% Similarity=0.337 Sum_probs=124.0
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhh
Q 002047 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINA 779 (975)
Q Consensus 700 i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~ 779 (975)
++||||||||+..|+++|+++++.+..+ +++|||||||||++|+|||.+|++|+ .++++|+||||.+.++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D-----~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~ 71 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKD-----RLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAV 71 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCC-----EEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHH
Confidence 5899999999999999999998765332 89999999999999999999999986 58999999999998887
Q ss_pred hcCChHH----HHHHhCCcccchhhhhhhccccccceEEEEcc-eEEEecCCccCcccCHhhhhhccCCcc----cCCCC
Q 002047 780 LFGFRIE----CIERMGERDGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPIT----MEAGS 850 (975)
Q Consensus 780 ~~gf~~e----~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~----~~~~~ 850 (975)
.+|+... ....+- .....+.+.+++..+|++..+++ ++++|||||+|.+ ++++...+.+.++ .+...
T Consensus 72 ~~g~~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~~a~eve~~l~~~~~~ 147 (257)
T cd07422 72 AAGIKKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALKLAREVEAALRGPNYR 147 (257)
T ss_pred hcCccccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHH
Confidence 6664311 111110 01123567788999999988865 8999999999975 4444333222211 11112
Q ss_pred cceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHH--HHHHcC
Q 002047 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME--FCNNND 895 (975)
Q Consensus 851 ~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~--fl~~~~ 895 (975)
.++..+.|+.|.. |.++.+|.....|-.+++.+ ||...|
T Consensus 148 ~~~~~my~~~p~~------W~~~l~g~~r~r~~~n~~trmR~~~~~g 188 (257)
T cd07422 148 EFLKNMYGNEPDR------WSDDLTGIDRLRYIVNAFTRMRFCTPDG 188 (257)
T ss_pred HHHHHhhCCCCcc------cCcccCccHHHHHHHHHhhceeeecCCC
Confidence 2566677777753 77776666655565555554 455444
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-21 Score=204.54 Aligned_cols=130 Identities=24% Similarity=0.415 Sum_probs=98.6
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCC----CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAG----DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~----~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (975)
++|.||||||||+.+|+++|+++++...+. .....++||||||||||++|.|||.+|++|+.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999998764320 000117999999999999999999999998754 47999999999
Q ss_pred ccchhhhcCCh-------HHHHHHhCCcccchhhhhhhccccccceEEEEc-ceEEEecCCccCc
Q 002047 774 AADINALFGFR-------IECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRS 830 (975)
Q Consensus 774 ~~~~~~~~gf~-------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~ 830 (975)
.+.++...+.. .+....|... ...+.+.+.++|+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 98877543311 1222333221 2345677889999999998765 5799999998864
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-21 Score=204.37 Aligned_cols=194 Identities=21% Similarity=0.311 Sum_probs=127.0
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
+.++||||||||++.|.++|+++++.+..+ +++|||||||||++|+|||.+|.+++ .++++|+||||.+.+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D-----~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL 71 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQD-----TLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLL 71 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCC-----EEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHH
Confidence 468999999999999999999999765443 79999999999999999999999874 468899999999999
Q ss_pred hhhcCCh-----HHHHHHhCCcccchhhhhhhccccccceEEEEc-ceEEEecCCccCcccCHhhhhhccCCcc----cC
Q 002047 778 NALFGFR-----IECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSINHVEQIENLQRPIT----ME 847 (975)
Q Consensus 778 ~~~~gf~-----~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~~~~~~~i~~i~rp~~----~~ 847 (975)
+..+|+. +.....+. ....+.+.+++..||+....+ .++++|||||+|.+ ++++...+.+.++ -+
T Consensus 72 ~~~~g~~~~~~~d~l~~~l~----a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~~a~eve~~L~~~ 146 (279)
T TIGR00668 72 AVFAGISRNKPKDRLDPLLE----APDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSD 146 (279)
T ss_pred HHhcCCCccCchHHHHHHHH----ccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHHHHHHHHHHHcCC
Confidence 8887753 12211121 124467788899999997654 47999999999985 4444333222211 11
Q ss_pred CCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHH--HHHHcC-CeEEEEec-cccccceE
Q 002047 848 AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME--FCNNND-LQLIVRAH-ECVMDGFE 911 (975)
Q Consensus 848 ~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~--fl~~~~-l~~iiR~H-~~~~~G~~ 911 (975)
.-..++..+.=+.|. .|.++..|.....|--+++.+ ||...| +++-..+. +-.+.||.
T Consensus 147 ~~~~fl~~mygn~p~------~W~~~l~g~~r~r~i~n~~TRmR~c~~~g~ld~~~k~~~~~~p~~~~ 208 (279)
T TIGR00668 147 SYPFFLDAMYGDMPN------RWSPELQGLARLRFIINAFTRMRFCFPNGQLDMYSKESPEDAPAPLK 208 (279)
T ss_pred CHHHHHHHhhCCCCc------cCCCCCchHHHHHHHHHHHhhheeeCCCCCCcccccCCcccCCCCCC
Confidence 100122333323343 266666555544555555544 555554 33333321 22355654
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=8e-20 Score=194.00 Aligned_cols=123 Identities=23% Similarity=0.293 Sum_probs=91.9
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCC--ccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchh
Q 002047 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGD--IAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (975)
Q Consensus 701 ~vvGDiHG~~~~L~~ll~~~g~~~~~~~--~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (975)
+||||||||++.|.++|+++++....+. ...-++||||||||||++|.|||.+|++++.. .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 6999999999999999999987532100 00117999999999999999999999998643 4899999999998876
Q ss_pred hhcCCh-----------------HHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCcc
Q 002047 779 ALFGFR-----------------IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIG 828 (975)
Q Consensus 779 ~~~gf~-----------------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~ 828 (975)
...+.. .+..+.++. ....++.+.++|+.||++...+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 443210 112222221 1234577889999999998764 7999999986
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=186.73 Aligned_cols=82 Identities=32% Similarity=0.479 Sum_probs=66.4
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC-CEEEEeccccccch
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN-NVHLIRGNHEAADI 777 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~-~v~llrGNHE~~~~ 777 (975)
++++||||||+++.|.++|+.+.............+||||||||||++|.|||.+|++++..+|. ++++||||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 68999999999999999998765321100001126999999999999999999999999999886 68999999998876
Q ss_pred hhh
Q 002047 778 NAL 780 (975)
Q Consensus 778 ~~~ 780 (975)
..+
T Consensus 83 ~fL 85 (304)
T cd07421 83 AFL 85 (304)
T ss_pred hHh
Confidence 543
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-19 Score=189.73 Aligned_cols=120 Identities=26% Similarity=0.336 Sum_probs=90.1
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++++||||||||+..|+++|+.+++.+..+ +++|||||||||++|.|||.+|.+ .+++.||||||.+.+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D-----~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l 85 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRD-----LLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMAL 85 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccC-----EEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHH
Confidence 489999999999999999999998763332 799999999999999999999976 368899999999988
Q ss_pred hhhcCChHHHHHHhCCc-------ccchhhhhhhccccccceEEEE---cceEEEecCCcc
Q 002047 778 NALFGFRIECIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIG 828 (975)
Q Consensus 778 ~~~~gf~~e~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~ 828 (975)
+...+-....+...|.. .....+..+.++++.||+...+ ++++++||||++
T Consensus 86 ~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 86 DALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 76533211112222211 1122345556889999999755 357999999984
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=183.60 Aligned_cols=147 Identities=26% Similarity=0.331 Sum_probs=104.6
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++|+|||||||++..|.++++.+++....+ .++|+|||||||+++.|++.+|.. ..+++|+||||.+.+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d-----~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~ 69 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARD-----RLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAI 69 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCC-----EEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHH
Confidence 479999999999999999999987643222 799999999999999999999875 368999999999988
Q ss_pred hhhcC--ChHHHHHHhCCccc-----chhhhhhhccccccceEEEEc---ceEEEecCCccCcccCHhhhhhccCCcccC
Q 002047 778 NALFG--FRIECIERMGERDG-----IWAWHRINRLFNWLPLAALIE---KKIICMHGGIGRSINHVEQIENLQRPITME 847 (975)
Q Consensus 778 ~~~~g--f~~e~~~~~g~~~~-----~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (975)
....+ +..+.+.+++.... ..+++.+.++|+.||+...++ .+++|||||+.+... ...+.. .+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~--~~~--- 143 (207)
T cd07424 70 DALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA--VTL--- 143 (207)
T ss_pred hHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc--ccc---
Confidence 77654 33344444443211 113455778999999998764 479999999965421 111100 011
Q ss_pred CCCcceeccccCCCC
Q 002047 848 AGSIVLMDLLWSDPT 862 (975)
Q Consensus 848 ~~~~~~~dllWsdP~ 862 (975)
......+++|+++.
T Consensus 144 -~~~~~~~~~w~~~~ 157 (207)
T cd07424 144 -RPEDIEELLWSRTR 157 (207)
T ss_pred -Ccccceeeeeccch
Confidence 11256678998765
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-18 Score=183.52 Aligned_cols=125 Identities=25% Similarity=0.365 Sum_probs=92.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
|++++|||||||+..|.++++.+... +.+ .+||||||||||+++.+|+.+|++++. .+.++++|+||||.+
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d------~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEE------TIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCC------EEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHH
Confidence 46899999999999999999988543 222 799999999999999999999999754 456899999999998
Q ss_pred chhhhcCC--------------hHHHHHHhCCccc---------------------------chhhhhhhccccccceEE
Q 002047 776 DINALFGF--------------RIECIERMGERDG---------------------------IWAWHRINRLFNWLPLAA 814 (975)
Q Consensus 776 ~~~~~~gf--------------~~e~~~~~g~~~~---------------------------~~~~~~~~~~f~~LPlaa 814 (975)
+++...+. ..+....||-... ...+..+..+++.||+..
T Consensus 74 ~l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~ 153 (235)
T PHA02239 74 FYNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYY 153 (235)
T ss_pred HHHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceE
Confidence 76543211 1223344542110 012244556888999997
Q ss_pred EEcceEEEecCCccCc
Q 002047 815 LIEKKIICMHGGIGRS 830 (975)
Q Consensus 815 ~i~~~il~vHgGi~~~ 830 (975)
..+ +++|||||+.|.
T Consensus 154 ~~~-~~ifVHAGi~p~ 168 (235)
T PHA02239 154 KED-KYIFSHSGGVSW 168 (235)
T ss_pred EEC-CEEEEeCCCCCC
Confidence 765 799999999875
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-18 Score=178.32 Aligned_cols=120 Identities=23% Similarity=0.244 Sum_probs=86.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++++||||||||+..|+++|+.+.+.+..+ .++|||||||||+++.|||.+|.+ .+++.||||||.+.+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d-----~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~ 83 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETD-----LLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMAL 83 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCC-----EEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHH
Confidence 489999999999999999999987654332 799999999999999999999864 378999999999888
Q ss_pred hhhcCChHHHHHHhCCcc-------cchhhhhhhccccccceEEEEc---ceEEEecCCcc
Q 002047 778 NALFGFRIECIERMGERD-------GIWAWHRINRLFNWLPLAALIE---KKIICMHGGIG 828 (975)
Q Consensus 778 ~~~~gf~~e~~~~~g~~~-------~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~ 828 (975)
+....-....+...|... .......+..+++.||+...+. +++++||||++
T Consensus 84 ~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 84 DAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 654211111111111110 0112233455789999997653 47899999984
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-16 Score=165.43 Aligned_cols=283 Identities=18% Similarity=0.216 Sum_probs=213.6
Q ss_pred ecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC--C
Q 002047 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT--N 160 (975)
Q Consensus 83 ~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t--~ 160 (975)
.+.++.|.+.-+-+-..+ ++.+||-=|. .-...|.+|+.. .
T Consensus 28 ~~lPdlPvg~KnG~Ga~i------------g~~~YVGLGs-------------------------~G~afy~ldL~~~~k 70 (381)
T COG3055 28 GQLPDLPVGFKNGAGALI------------GDTVYVGLGS-------------------------AGTAFYVLDLKKPGK 70 (381)
T ss_pred ccCCCCCcccccccccee------------cceEEEEecc-------------------------CCccceehhhhcCCC
Confidence 456677888776666666 7789987663 223667788864 5
Q ss_pred cEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCC----CccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe
Q 002047 161 KWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG----LSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (975)
Q Consensus 161 ~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~----~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~ 236 (975)
.|++++.. +-.+|....+++++++||+|||.+... ...+|+|+||+.+++ |+++.+.. |..-.+|+++.+
T Consensus 71 ~W~~~a~F--pG~~rnqa~~a~~~~kLyvFgG~Gk~~~~~~~~~nd~Y~y~p~~ns--W~kl~t~s--P~gl~G~~~~~~ 144 (381)
T COG3055 71 GWTKIADF--PGGARNQAVAAVIGGKLYVFGGYGKSVSSSPQVFNDAYRYDPSTNS--WHKLDTRS--PTGLVGASTFSL 144 (381)
T ss_pred CceEcccC--CCcccccchheeeCCeEEEeeccccCCCCCceEeeeeEEecCCCCh--hheecccc--ccccccceeEec
Confidence 79999887 467899999999999999999987443 347999999999986 99998554 667889999999
Q ss_pred CCcEEEEEcCCC----------------------------------CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcc
Q 002047 237 GQRYLMAIGGND----------------------------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (975)
Q Consensus 237 ~~~~lyV~GG~~----------------------------------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~ 282 (975)
++..||++||.+ .......++.||+.++ +|+.+.-.+.. ..
T Consensus 145 ~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n--~W~~~G~~pf~---~~ 219 (381)
T COG3055 145 NGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN--QWRNLGENPFY---GN 219 (381)
T ss_pred CCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--hhhhcCcCccc---Cc
Confidence 988999999973 1122568999999999 99988644333 46
Q ss_pred eeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCC------CcceeeEEEeCCEEEEEcCcCCCC
Q 002047 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS------PRYQHAAVFVNARLHVSGGALGGG 356 (975)
Q Consensus 283 ~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~------~R~~hs~v~~~~~L~V~GG~~~~~ 356 (975)
+.++++..++++.++-|.-..+.....++.++...+ .-+|......++. ...++-.-..++.++|.||.+-.+
T Consensus 220 aGsa~~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~-~~~w~~l~~lp~~~~~~~eGvAGaf~G~s~~~~lv~GGAnF~G 298 (381)
T COG3055 220 AGSAVVIKGNKLTLINGEIKPGLRTAEVKQADFGGD-NLKWLKLSDLPAPIGSNKEGVAGAFSGKSNGEVLVAGGANFPG 298 (381)
T ss_pred cCcceeecCCeEEEEcceecCCccccceeEEEeccC-ceeeeeccCCCCCCCCCccccceeccceeCCeEEEecCCCChh
Confidence 678888888999999998887777777777765533 4467777654322 223333444578899999964321
Q ss_pred ---------------CccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEE
Q 002047 357 ---------------RMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIY 421 (975)
Q Consensus 357 ---------------~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~ 421 (975)
......++||+|| ++.|..+..+ |.++++..++..++.||++
T Consensus 299 a~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d--~g~Wk~~GeL---------------------p~~l~YG~s~~~nn~vl~I 355 (381)
T COG3055 299 ALKAYKNGKFYAHEGLSKSWNSEVYIFD--NGSWKIVGEL---------------------PQGLAYGVSLSYNNKVLLI 355 (381)
T ss_pred HHHHHHhcccccccchhhhhhceEEEEc--CCceeeeccc---------------------CCCccceEEEecCCcEEEE
Confidence 1123467899998 9999999988 6688899999999999999
Q ss_pred cCC-CCCCCccceEeee
Q 002047 422 GGL-RGGVLLDDLLVAE 437 (975)
Q Consensus 422 GG~-~~~~~l~Dv~~ld 437 (975)
||- +++..+..++.+-
T Consensus 356 GGE~~~Gka~~~v~~l~ 372 (381)
T COG3055 356 GGETSGGKATTRVYSLS 372 (381)
T ss_pred ccccCCCeeeeeEEEEE
Confidence 994 5678888888764
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-15 Score=164.52 Aligned_cols=317 Identities=17% Similarity=0.265 Sum_probs=206.9
Q ss_pred CCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEE
Q 002047 85 KEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSR 164 (975)
Q Consensus 85 ~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~ 164 (975)
....|.-|.||.++.... .+.||++||.++.. -+.|+|.|....+.|..
T Consensus 254 ~~~~p~~RgGHQMV~~~~----------~~CiYLYGGWdG~~---------------------~l~DFW~Y~v~e~~W~~ 302 (723)
T KOG2437|consen 254 EDNRPGMRGGHQMVIDVQ----------TECVYLYGGWDGTQ---------------------DLADFWAYSVKENQWTC 302 (723)
T ss_pred cccCccccCcceEEEeCC----------CcEEEEecCcccch---------------------hHHHHHhhcCCcceeEE
Confidence 347899999999999742 46899999998765 68899999999999999
Q ss_pred ecCCCCCCCCccceEEEEeCC--EEEEEeccCCCC-----CccccEEEEEcCCCCCcEEEEEec---CCCCCCCcccEEE
Q 002047 165 ITPFGEPPTPRAAHVATAVGT--MVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMA 234 (975)
Q Consensus 165 l~~~g~~P~pR~~hsa~~~~~--~iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~---g~~P~~R~~h~~~ 234 (975)
+...+..|..|..|-++.... ++|+.|-+-+.. ..-.|+|+||..+++ |..+.-. ..-|..-+.|.|+
T Consensus 303 iN~~t~~PG~RsCHRMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~~--W~~ls~dt~~dGGP~~vfDHqM~ 380 (723)
T KOG2437|consen 303 INRDTEGPGARSCHRMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTNT--WMLLSEDTAADGGPKLVFDHQMC 380 (723)
T ss_pred eecCCCCCcchhhhhhhhhhhHhHHhhhhhccccccccccccccceEEEecCCce--eEEecccccccCCcceeecceee
Confidence 988888899999999999876 999999754322 235899999999986 9988642 2358899999999
Q ss_pred EeCCc-EEEEEcCCCC--C-CCCCcEEEEECCCCCcEEEEccCCCC-------CCCCcceeEEE-EEeCCeEEEecCCCC
Q 002047 235 LVGQR-YLMAIGGNDG--K-RPLADVWALDTAAKPYEWRKLEPEGE-------GPPPCMYATAS-ARSDGLLLLCGGRDA 302 (975)
Q Consensus 235 ~~~~~-~lyV~GG~~g--~-~~~ndv~~yDl~s~~~~W~~v~~~~~-------~P~~r~~~~a~-~~~~g~lyvfGG~~~ 302 (975)
+.+++ .||||||..- . -.+..+|.||+... .|..+..... .-..|..|.+- ...+.++|+|||...
T Consensus 381 Vd~~k~~iyVfGGr~~~~~e~~f~GLYaf~~~~~--~w~~l~e~~~~~~~vvE~~~sR~ghcmE~~~~n~~ly~fggq~s 458 (723)
T KOG2437|consen 381 VDSEKHMIYVFGGRILTCNEPQFSGLYAFNCQCQ--TWKLLREDSCNAGPVVEDIQSRIGHCMEFHSKNRCLYVFGGQRS 458 (723)
T ss_pred EecCcceEEEecCeeccCCCccccceEEEecCCc--cHHHHHHHHhhcCcchhHHHHHHHHHHHhcCCCCeEEeccCccc
Confidence 99872 3999999842 2 34788999999998 8977643211 01123444433 344679999999765
Q ss_pred CCCCccceEEeecCCCCeE----EEEECCCCCCCCcceeeEEEe---CCEEEEEcCcCCCCCc--cccCCcEEEEECCCC
Q 002047 303 SSVPLASAYGLAKHRDGRW----EWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRM--VEDSSSVAVLDTAAG 373 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W----~w~~~~g~~P~~R~~hs~v~~---~~~L~V~GG~~~~~~~--~~~~~dv~~yD~~t~ 373 (975)
+. .++=.+.|+....+.= .-...+.+.|.+-.. .-+.. ...|++.-|......- ....+.+|+|+..++
T Consensus 459 ~~-El~L~f~y~I~~E~~~~~s~~~k~dsS~~pS~~f~-qRs~~dp~~~~i~~~~G~~~~~~~~e~~~rns~wi~~i~~~ 536 (723)
T KOG2437|consen 459 KT-ELNLFFSYDIDSEHVDIISDGTKKDSSMVPSTGFT-QRATIDPELNEIHVLSGLSKDKEKREENVRNSFWIYDIVRN 536 (723)
T ss_pred ce-EEeehhcceeccccchhhhccCcCccccCCCcchh-hhcccCCCCcchhhhcccchhccCccccccCcEEEEEeccc
Confidence 54 2333333322111000 000011222222111 11222 3467777776432211 123678999999999
Q ss_pred eEEEcccCcCCCCCC--CCccccCCC--CCccCCCccceeEEEEE--CCEEEEEcCCCCC-----CCccceEeeecc
Q 002047 374 VWCDTKSVVTSPRTG--RYSADAAGG--DAAVELTRRCRHAAAAV--GDLIFIYGGLRGG-----VLLDDLLVAEDL 439 (975)
Q Consensus 374 ~W~~v~~~~~~p~~~--~~~~~~~~~--~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~-----~~l~Dv~~ld~~ 439 (975)
.|..+.......... +. ....+- .--..+.+|++|+.++. ..-+|++||+.+. ..++|.|.++.-
T Consensus 537 ~w~cI~~I~~~~~d~dtvf-svpFp~ks~~~~~~~~rf~h~~~~dL~~~~~yl~Ggn~~~~~~~~m~l~dfW~l~I~ 612 (723)
T KOG2437|consen 537 SWSCIYKIDQAAKDNDTVF-SVPFPTKSLQEEEPCPRFAHQLVYDLLHKVHYLFGGNPGKSCSPKMRLDDFWSLKIC 612 (723)
T ss_pred chhhHhhhHHhhccCCcee-eccCCcccccceeccccchhHHHHHHhhhhhhhhcCCCCCCCCchhhhhhHHHHhhc
Confidence 998876552211000 00 000000 11234778888887655 5568999997653 467888887755
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.9e-12 Score=137.02 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=169.5
Q ss_pred eecCCCCC-CCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCC
Q 002047 82 IEKKEDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTN 160 (975)
Q Consensus 82 ~~~~~~~P-~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~ 160 (975)
|+.....| .+|-+.+.+++ +++||||||....... .-...+|+|+||+.++
T Consensus 72 W~~~a~FpG~~rnqa~~a~~------------~~kLyvFgG~Gk~~~~----------------~~~~~nd~Y~y~p~~n 123 (381)
T COG3055 72 WTKIADFPGGARNQAVAAVI------------GGKLYVFGGYGKSVSS----------------SPQVFNDAYRYDPSTN 123 (381)
T ss_pred ceEcccCCCcccccchheee------------CCeEEEeeccccCCCC----------------CceEeeeeEEecCCCC
Confidence 34445555 47888888888 7999999998765431 1128899999999999
Q ss_pred cEEEecCCCCCCCCccceEEEEeCC-EEEEEeccCCCC---------------------------------CccccEEEE
Q 002047 161 KWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAG---------------------------------LSAEDLHVL 206 (975)
Q Consensus 161 ~W~~l~~~g~~P~pR~~hsa~~~~~-~iyv~GG~~~~~---------------------------------~~~~dv~~y 206 (975)
+|.++... .|....+|+++.+++ +||++||.+..- .....+..|
T Consensus 124 sW~kl~t~--sP~gl~G~~~~~~~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy 201 (381)
T COG3055 124 SWHKLDTR--SPTGLVGASTFSLNGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSY 201 (381)
T ss_pred hhheeccc--cccccccceeEecCCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhccccccccc
Confidence 99999877 477788999999988 999999964110 014678889
Q ss_pred EcCCCCCcEEEEEecCCCC-CCCcccEEEEeCCcEEEEEcCCC-CCCCCCcEEEEECCCCCcEEEEccCCCCCCCC---c
Q 002047 207 DLTQQRPRWHRVVVQGPGP-GPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPP---C 281 (975)
Q Consensus 207 D~~t~~~~W~~v~~~g~~P-~~R~~h~~~~~~~~~lyV~GG~~-g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~---r 281 (975)
++.++. |+.+- ..| .++++++. +.+++++.++-|.- ..-....+++++...+..+|..+.+.+.+... -
T Consensus 202 ~p~~n~--W~~~G---~~pf~~~aGsa~-~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~~~~w~~l~~lp~~~~~~~eG 275 (381)
T COG3055 202 DPSTNQ--WRNLG---ENPFYGNAGSAV-VIKGNKLTLINGEIKPGLRTAEVKQADFGGDNLKWLKLSDLPAPIGSNKEG 275 (381)
T ss_pred ccccch--hhhcC---cCcccCccCcce-eecCCeEEEEcceecCCccccceeEEEeccCceeeeeccCCCCCCCCCccc
Confidence 998875 98774 334 57777555 45555788887763 23446778889988777899999766543222 2
Q ss_pred ceeEEEEEeCCeEEEecCCCCCC------------------CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeC
Q 002047 282 MYATASARSDGLLLLCGGRDASS------------------VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVN 343 (975)
Q Consensus 282 ~~~~a~~~~~g~lyvfGG~~~~~------------------~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~ 343 (975)
...+.....++.+.+.||..-.+ .-.+++|.|+ ++.|+ .+ +..|.++..-.++..+
T Consensus 276 vAGaf~G~s~~~~lv~GGAnF~Ga~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d---~g~Wk--~~-GeLp~~l~YG~s~~~n 349 (381)
T COG3055 276 VAGAFSGKSNGEVLVAGGANFPGALKAYKNGKFYAHEGLSKSWNSEVYIFD---NGSWK--IV-GELPQGLAYGVSLSYN 349 (381)
T ss_pred cceeccceeCCeEEEecCCCChhHHHHHHhcccccccchhhhhhceEEEEc---CCcee--ee-cccCCCccceEEEecC
Confidence 23333456678999999952211 1235677775 44554 33 4457888888888999
Q ss_pred CEEEEEcCcCCCCCccccCCcEEEE
Q 002047 344 ARLHVSGGALGGGRMVEDSSSVAVL 368 (975)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~~y 368 (975)
+.||++||.+..+.. ...|+.+
T Consensus 350 n~vl~IGGE~~~Gka---~~~v~~l 371 (381)
T COG3055 350 NKVLLIGGETSGGKA---TTRVYSL 371 (381)
T ss_pred CcEEEEccccCCCee---eeeEEEE
Confidence 999999999877643 4445544
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-12 Score=144.94 Aligned_cols=211 Identities=21% Similarity=0.356 Sum_probs=155.9
Q ss_pred CCcEEEEEecC-------CCCCCCcccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcce
Q 002047 212 RPRWHRVVVQG-------PGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (975)
Q Consensus 212 ~~~W~~v~~~g-------~~P~~R~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~ 283 (975)
..+|.+++... ..|..|.||.|+... +++||+.||.+|...+.|.|.|+...+ .|..+...+..|+.|.+
T Consensus 238 ~~~W~~i~~~~~~~~~~~~~p~~RgGHQMV~~~~~~CiYLYGGWdG~~~l~DFW~Y~v~e~--~W~~iN~~t~~PG~RsC 315 (723)
T KOG2437|consen 238 KPRWSQIIPKSTKGDGEDNRPGMRGGHQMVIDVQTECVYLYGGWDGTQDLADFWAYSVKEN--QWTCINRDTEGPGARSC 315 (723)
T ss_pred cccccccCchhhcccccccCccccCcceEEEeCCCcEEEEecCcccchhHHHHHhhcCCcc--eeEEeecCCCCCcchhh
Confidence 35799887654 568999999998754 359999999999999999999999999 99999998888999999
Q ss_pred eEEEE-EeCCeEEEecCCCCCC-----CCccceEEeecCCCCeEEEEECCC---CCCCCcceeeEEEeCCE--EEEEcCc
Q 002047 284 ATASA-RSDGLLLLCGGRDASS-----VPLASAYGLAKHRDGRWEWAIAPG---VSPSPRYQHAAVFVNAR--LHVSGGA 352 (975)
Q Consensus 284 ~~a~~-~~~g~lyvfGG~~~~~-----~~l~d~~~~~~~~~~~W~w~~~~g---~~P~~R~~hs~v~~~~~--L~V~GG~ 352 (975)
|-++. ....+||+.|-+-+.+ ..-+|.|.|+..++ .|.-..... --|..-+.|.+++.+.+ +||+||.
T Consensus 316 HRMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~-~W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGGr 394 (723)
T KOG2437|consen 316 HRMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTN-TWMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGGR 394 (723)
T ss_pred hhhhhhhhHhHHhhhhhccccccccccccccceEEEecCCc-eeEEecccccccCCcceeecceeeEecCcceEEEecCe
Confidence 98876 3456999999864332 23478999988776 444333221 12677899999999887 9999998
Q ss_pred CCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEE--CCEEEEEcCCCCCCCc
Q 002047 353 LGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLL 430 (975)
Q Consensus 353 ~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~~~l 430 (975)
.-... ...+..+|+||+....|.....--+- ..+ .......|.+|++-.. ++++|+|||....+.+
T Consensus 395 ~~~~~-e~~f~GLYaf~~~~~~w~~l~e~~~~----------~~~-vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~~El 462 (723)
T KOG2437|consen 395 ILTCN-EPQFSGLYAFNCQCQTWKLLREDSCN----------AGP-VVEDIQSRIGHCMEFHSKNRCLYVFGGQRSKTEL 462 (723)
T ss_pred eccCC-CccccceEEEecCCccHHHHHHHHhh----------cCc-chhHHHHHHHHHHHhcCCCCeEEeccCcccceEE
Confidence 54332 12367899999999999876543110 000 1122346778876665 5689999998776666
Q ss_pred cceEeee
Q 002047 431 DDLLVAE 437 (975)
Q Consensus 431 ~Dv~~ld 437 (975)
+=.+.+|
T Consensus 463 ~L~f~y~ 469 (723)
T KOG2437|consen 463 NLFFSYD 469 (723)
T ss_pred eehhcce
Confidence 5555554
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.8e-09 Score=105.45 Aligned_cols=77 Identities=30% Similarity=0.374 Sum_probs=56.5
Q ss_pred CEEEEecCCCCHHHH---HH-HHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHH--HHhhhcCCCCEEEEeccc
Q 002047 699 PIKIFGDLHGQFGDL---MR-LFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLL--LALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L---~~-ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll--~~lk~~~P~~v~llrGNH 772 (975)
+|++|||+|+.+... .+ +.........+ .+|++||++|++..+.+..... +..+...+..+++++|||
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPD------FIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTS------EEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCC------EEEeeccccccccccccchhhhccchhhhhcccccccccccc
Confidence 689999999999987 33 33332222222 6899999999999988877665 555566677999999999
Q ss_pred cccchhhhc
Q 002047 773 EAADINALF 781 (975)
Q Consensus 773 E~~~~~~~~ 781 (975)
|.......+
T Consensus 76 D~~~~~~~~ 84 (200)
T PF00149_consen 76 DYYSGNSFY 84 (200)
T ss_dssp SSHHHHHHH
T ss_pred ccceecccc
Confidence 998765544
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-08 Score=80.60 Aligned_cols=50 Identities=42% Similarity=0.823 Sum_probs=44.2
Q ss_pred CCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCC
Q 002047 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGE 170 (975)
Q Consensus 91 pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~ 170 (975)
||++|+++++ +++||||||...... .++++++||+.+++|+.++++
T Consensus 1 pR~~~s~v~~------------~~~iyv~GG~~~~~~--------------------~~~~v~~yd~~t~~W~~~~~m-- 46 (50)
T PF13964_consen 1 PRYGHSAVVV------------GGKIYVFGGYDNSGK--------------------YSNDVERYDPETNTWEQLPPM-- 46 (50)
T ss_pred CCccCEEEEE------------CCEEEEECCCCCCCC--------------------ccccEEEEcCCCCcEEECCCC--
Confidence 7999999999 789999999876421 789999999999999999987
Q ss_pred CCCCc
Q 002047 171 PPTPR 175 (975)
Q Consensus 171 ~P~pR 175 (975)
|.||
T Consensus 47 -p~pR 50 (50)
T PF13964_consen 47 -PTPR 50 (50)
T ss_pred -CCCC
Confidence 7776
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.7e-08 Score=80.88 Aligned_cols=50 Identities=32% Similarity=0.615 Sum_probs=45.8
Q ss_pred CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 174 PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 174 pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
||.+|++++++++|||+||........+++++||+.+++ |+.++ +||.+|
T Consensus 1 pR~~~s~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~---~mp~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVVGGKIYVFGGYDNSGKYSNDVERYDPETNT--WEQLP---PMPTPR 50 (50)
T ss_pred CCccCEEEEECCEEEEECCCCCCCCccccEEEEcCCCCc--EEECC---CCCCCC
Confidence 699999999999999999997767778999999999986 99998 899887
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.5e-07 Score=91.66 Aligned_cols=59 Identities=24% Similarity=0.400 Sum_probs=47.8
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
+|.+++|+||++..+.++++.+.. .+ .++++||+++++.... ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d------~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD------LIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC------EEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 578999999999999999998754 22 7999999999998654 111 24699999999984
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.71 E-value=8.1e-08 Score=108.17 Aligned_cols=93 Identities=17% Similarity=0.311 Sum_probs=78.8
Q ss_pred cCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEE
Q 002047 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (975)
Q Consensus 84 ~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~ 163 (975)
+.|-.+.||..|+++.+ ++++|||||.+.... ..+++|+||..+.+|.
T Consensus 17 ~~~~~~~~~~~~tav~i------------gdk~yv~GG~~d~~~--------------------~~~~v~i~D~~t~~W~ 64 (398)
T PLN02772 17 TNGFGVKPKNRETSVTI------------GDKTYVIGGNHEGNT--------------------LSIGVQILDKITNNWV 64 (398)
T ss_pred ccCccCCCCCcceeEEE------------CCEEEEEcccCCCcc--------------------ccceEEEEECCCCcEe
Confidence 34556779999999999 899999999776332 6789999999999999
Q ss_pred EecCCCCCCCCccceEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCC
Q 002047 164 RITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (975)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~ 211 (975)
.....|.+|.||.+|++|+++ ++|+|+++.++. .+++|.+.+.+.
T Consensus 65 ~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~---~~~~w~l~~~t~ 110 (398)
T PLN02772 65 SPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAP---DDSIWFLEVDTP 110 (398)
T ss_pred cccccCCCCCCCCcceEEEECCceEEEEeCCCCC---ccceEEEEcCCH
Confidence 999999999999999999996 599999875433 478999888773
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.70 E-value=7e-08 Score=108.66 Aligned_cols=89 Identities=18% Similarity=0.399 Sum_probs=79.0
Q ss_pred CCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCC
Q 002047 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251 (975)
Q Consensus 172 P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~ 251 (975)
..|+.+|+++++++++|||||.++.+...+++|+||..+.+ |....+.|..|.+|.+|++|++++.+|+|+++..+.
T Consensus 22 ~~~~~~~tav~igdk~yv~GG~~d~~~~~~~v~i~D~~t~~--W~~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~- 98 (398)
T PLN02772 22 VKPKNRETSVTIGDKTYVIGGNHEGNTLSIGVQILDKITNN--WVSPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAP- 98 (398)
T ss_pred CCCCCcceeEEECCEEEEEcccCCCccccceEEEEECCCCc--EecccccCCCCCCCCcceEEEECCceEEEEeCCCCC-
Confidence 57899999999999999999988766578999999999986 999999999999999999999988899999876553
Q ss_pred CCCcEEEEECCCC
Q 002047 252 PLADVWALDTAAK 264 (975)
Q Consensus 252 ~~ndv~~yDl~s~ 264 (975)
-.++|.+.+.+.
T Consensus 99 -~~~~w~l~~~t~ 110 (398)
T PLN02772 99 -DDSIWFLEVDTP 110 (398)
T ss_pred -ccceEEEEcCCH
Confidence 378999988764
|
|
| >COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.5e-08 Score=98.35 Aligned_cols=147 Identities=35% Similarity=0.484 Sum_probs=117.1
Q ss_pred chhhhcCChHHHHHHhCCcccchhhhh---hhccccccceEEEEcc-eEEEecCCccCcc-cCHhhhhhccCCc--ccCC
Q 002047 776 DINALFGFRIECIERMGERDGIWAWHR---INRLFNWLPLAALIEK-KIICMHGGIGRSI-NHVEQIENLQRPI--TMEA 848 (975)
Q Consensus 776 ~~~~~~gf~~e~~~~~g~~~~~~~~~~---~~~~f~~LPlaa~i~~-~il~vHgGi~~~~-~~~~~i~~i~rp~--~~~~ 848 (975)
.+...+|+.+++...++.. ..|.. +.++|+.||+.+++++ .++|.|+++++.+ ..+++++.+.|.. ....
T Consensus 2 ~l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 78 (155)
T COG0639 2 LLTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPH 78 (155)
T ss_pred hhhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCC
Confidence 3556788888888877653 34655 9999999999999988 9999999999976 6777888777765 3333
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEecccccc
Q 002047 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYC 928 (975)
Q Consensus 849 ~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~ 928 (975)
.+ ...+.+|+++... ....|.+..||.+. .| .+....|+..+..+.+.|+|+.+..++...+.+..+|+|++++|+
T Consensus 79 ~g-~~~~~~~~~~~~~-~~~~w~~~~~g~~~-~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 79 AG-HTHDLLWSDPDGG-DRRIWNPGPRGVPR-DG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cc-ccccccCCCCCCC-cccccccCCCCCCc-cc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 33 5666699998753 24679999999883 44 678888998898888999999999999988776889999999987
Q ss_pred C
Q 002047 929 G 929 (975)
Q Consensus 929 ~ 929 (975)
.
T Consensus 155 ~ 155 (155)
T COG0639 155 Y 155 (155)
T ss_pred C
Confidence 3
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.4e-08 Score=99.96 Aligned_cols=69 Identities=19% Similarity=0.323 Sum_probs=53.8
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC--------hHHHHHHHHHhhhcCCCCEEEEe
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH--------SLETITLLLALKVEYPNNVHLIR 769 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~--------s~evl~ll~~lk~~~P~~v~llr 769 (975)
++|.|++|+||++..|.++++.+.....+ .++++||++|+|+. ..+++.+|..+ ...+++++
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d------~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~ 70 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGAD------WLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVR 70 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCC------EEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEc
Confidence 57999999999999999999887433333 79999999999873 45667666543 24699999
Q ss_pred ccccccc
Q 002047 770 GNHEAAD 776 (975)
Q Consensus 770 GNHE~~~ 776 (975)
||||...
T Consensus 71 GNhD~~~ 77 (182)
T PRK09453 71 GNCDSEV 77 (182)
T ss_pred cCCcchh
Confidence 9999743
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.9e-07 Score=91.97 Aligned_cols=152 Identities=23% Similarity=0.307 Sum_probs=90.0
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
|+|.++||+|++...+.++++.+. ..+ .++++||++|+ .+++.++..+ .+++++||||....
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~--~~d------~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~ 62 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYIN--EPD------FVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAF 62 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHT--TES------EEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHhc--CCC------EEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccc
Confidence 579999999999999999999982 122 68889999993 7777777554 69999999996442
Q ss_pred hhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccc
Q 002047 778 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLL 857 (975)
Q Consensus 778 ~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dll 857 (975)
..... . .. +...+.+ .+...+++++||.....
T Consensus 63 ~~~~~----------~----~~------~~~~~~~-~~~~~~i~~~H~~~~~~--------------------------- 94 (156)
T PF12850_consen 63 PNEND----------E----EY------LLDALRL-TIDGFKILLSHGHPYDV--------------------------- 94 (156)
T ss_dssp HSEEC----------T----CS------SHSEEEE-EETTEEEEEESSTSSSS---------------------------
T ss_pred hhhhh----------c----cc------cccceee-eecCCeEEEECCCCccc---------------------------
Confidence 22110 0 00 1111111 12245899999966430
Q ss_pred cCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEE
Q 002047 858 WSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAI 937 (975)
Q Consensus 858 WsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~ 937 (975)
..+.+.+.+.+...+.++++-||.-...-++ ..+..+++.-|..... .+...++
T Consensus 95 -----------------------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~ 148 (156)
T PF12850_consen 95 -----------------------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGY 148 (156)
T ss_dssp -----------------------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEE
T ss_pred -----------------------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEE
Confidence 0234556677789999999999987644333 3343455544433222 2225666
Q ss_pred EEEc
Q 002047 938 LVLG 941 (975)
Q Consensus 938 l~i~ 941 (975)
++++
T Consensus 149 ~i~~ 152 (156)
T PF12850_consen 149 AILD 152 (156)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=1e-07 Score=76.07 Aligned_cols=49 Identities=41% Similarity=0.751 Sum_probs=40.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV 183 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~ 183 (975)
|++||||||...... ..++|+|+||+.+++|+++. +.|.+|++|+++++
T Consensus 1 g~~~~vfGG~~~~~~-------------------~~~nd~~~~~~~~~~W~~~~---~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGG-------------------TRLNDVWVFDLDTNTWTRIG---DLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCC-------------------CEecCEEEEECCCCEEEECC---CCCCCccceEEEEC
Confidence 478999999984221 18899999999999999994 45999999999874
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.60 E-value=1e-06 Score=88.84 Aligned_cols=62 Identities=19% Similarity=0.253 Sum_probs=47.4
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCC-CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~-~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
+++.|++|+||++..+..+++.+... ..+ .++++||++ +.+++.+|..+. ..++.++||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVD------LVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCC------EEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 57899999999998877766665443 223 689999999 467777776542 259999999998
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.2e-07 Score=75.52 Aligned_cols=47 Identities=28% Similarity=0.678 Sum_probs=30.6
Q ss_pred CCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCC
Q 002047 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168 (975)
Q Consensus 91 pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~ 168 (975)
||++|+++.+. +++||||||...... .++|+|+||+.+++|++++++
T Consensus 1 pR~~h~~~~~~-----------~~~i~v~GG~~~~~~--------------------~~~d~~~~d~~~~~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIG-----------DNSIYVFGGRDSSGS--------------------PLNDLWIFDIETNTWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE------------TTEEEEE--EEE-TE--------------------E---EEEEETTTTEEEE--SS
T ss_pred CcceEEEEEEe-----------CCeEEEECCCCCCCc--------------------ccCCEEEEECCCCEEEECCCC
Confidence 79999999983 479999999876532 889999999999999999554
|
|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.6e-07 Score=73.73 Aligned_cols=48 Identities=33% Similarity=0.704 Sum_probs=42.1
Q ss_pred CCEEEEEeccC-CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe
Q 002047 184 GTMVVIQGGIG-PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (975)
Q Consensus 184 ~~~iyv~GG~~-~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~ 236 (975)
+++||||||.. .....++|+|+||+.+.+ |+++ +++|.+|++|+++++
T Consensus 1 g~~~~vfGG~~~~~~~~~nd~~~~~~~~~~--W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGTRLNDVWVFDLDTNT--WTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCCEecCEEEEECCCCE--EEEC---CCCCCCccceEEEEC
Confidence 57999999998 467778999999998874 9988 589999999999864
|
|
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.5e-07 Score=72.98 Aligned_cols=47 Identities=34% Similarity=0.620 Sum_probs=39.9
Q ss_pred CcceeeEEEeCCEEEEEcCc-CCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 333 PRYQHAAVFVNARLHVSGGA-LGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 333 ~R~~hs~v~~~~~L~V~GG~-~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
+|++|++++++++|||+||+ .... ....+++++||+++++|+.+..+
T Consensus 1 ~r~~hs~~~~~~kiyv~GG~~~~~~--~~~~~~v~~~d~~t~~W~~~~~~ 48 (49)
T PF07646_consen 1 PRYGHSAVVLDGKIYVFGGYGTDNG--GSSSNDVWVFDTETNQWTELSPM 48 (49)
T ss_pred CccceEEEEECCEEEEECCcccCCC--CcccceeEEEECCCCEEeecCCC
Confidence 68999999999999999999 2111 24589999999999999998876
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.3e-07 Score=86.60 Aligned_cols=118 Identities=22% Similarity=0.265 Sum_probs=77.7
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
+|.+++|+||++. .+ .....+ .+|++||+++++.... +++.++..++ .| .+++++||||...
T Consensus 1 ~i~~isD~H~~~~----~~---~~~~~D------~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~ 64 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SIPDGD------VLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTL 64 (135)
T ss_pred CEEEEeCCCCCCC----cC---cCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcC
Confidence 4789999999987 11 111222 6888999999986532 3444444432 12 3678999999631
Q ss_pred hhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceecc
Q 002047 777 INALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDL 856 (975)
Q Consensus 777 ~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dl 856 (975)
. .-+.+++++||.+.... +.
T Consensus 65 ~-------------------------------------~~~~~ilv~H~~p~~~~-----------------------~~ 84 (135)
T cd07379 65 D-------------------------------------PEDTDILVTHGPPYGHL-----------------------DL 84 (135)
T ss_pred C-------------------------------------CCCCEEEEECCCCCcCc-----------------------cc
Confidence 1 12347899999653210 00
Q ss_pred ccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceE
Q 002047 857 LWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (975)
Q Consensus 857 lWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (975)
++ + . ..+|.+.+.+++++.+.+++|-||.-...|++
T Consensus 85 ~~--~----------------~-~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 85 VS--S----------------G-QRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred cc--c----------------C-cccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 00 0 0 23577889999999999999999999988887
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.8e-07 Score=74.54 Aligned_cols=46 Identities=35% Similarity=0.850 Sum_probs=30.6
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCC-CCCCcEEEEECCCCCcEEEEccCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEPE 274 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~-~~~ndv~~yDl~s~~~~W~~v~~~ 274 (975)
||++|+++.+++++||||||.+.. ..++|+|+||+.++ +|+++.++
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~--~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIETN--TWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTTT--EEEE--SS
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCCC--EEEECCCC
Confidence 699999999975699999999876 68999999999999 99999543
|
|
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.8e-07 Score=71.30 Aligned_cols=46 Identities=37% Similarity=0.862 Sum_probs=41.3
Q ss_pred CCcccEEEEeCCcEEEEEcCC---CCCCCCCcEEEEECCCCCcEEEEccCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGN---DGKRPLADVWALDTAAKPYEWRKLEPEG 275 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~---~g~~~~ndv~~yDl~s~~~~W~~v~~~~ 275 (975)
+|++|+++++++ +||||||. ......+++++||+.++ +|+.+++++
T Consensus 1 ~r~~hs~~~~~~-kiyv~GG~~~~~~~~~~~~v~~~d~~t~--~W~~~~~~g 49 (49)
T PF07646_consen 1 PRYGHSAVVLDG-KIYVFGGYGTDNGGSSSNDVWVFDTETN--QWTELSPMG 49 (49)
T ss_pred CccceEEEEECC-EEEEECCcccCCCCcccceeEEEECCCC--EEeecCCCC
Confidence 699999999998 89999999 45667999999999999 999998764
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.9e-06 Score=90.27 Aligned_cols=113 Identities=23% Similarity=0.234 Sum_probs=72.1
Q ss_pred CEEEEecCCCCHHHHH-HHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 699 PIKIFGDLHGQFGDLM-RLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~-~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
+|.++|||||++.... +.++..+ .+ .+||+||+++. +.+++..|..+ +..++.++||||....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~---pD------~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ---PD------LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC---CC------EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 5899999999987642 3444332 12 68999999864 56777766554 2458999999997553
Q ss_pred hhh---cC-----------------------------------------C-hHHHHHHhCCcccchhhhhhhccccccce
Q 002047 778 NAL---FG-----------------------------------------F-RIECIERMGERDGIWAWHRINRLFNWLPL 812 (975)
Q Consensus 778 ~~~---~g-----------------------------------------f-~~e~~~~~g~~~~~~~~~~~~~~f~~LPl 812 (975)
... +. + ..++...|+ ....++.+..+++.++.
T Consensus 66 ~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fg---i~s~~eA~~~ive~~~~ 142 (238)
T cd07397 66 ATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYG---VISLEESAQRIIAAAKK 142 (238)
T ss_pred ccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhC---CCCHHHHHHHHHHHhhh
Confidence 200 00 0 114455554 22455666677777764
Q ss_pred EEEEcceEEEecCCccCc
Q 002047 813 AALIEKKIICMHGGIGRS 830 (975)
Q Consensus 813 aa~i~~~il~vHgGi~~~ 830 (975)
+......||+.|+++...
T Consensus 143 ~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 143 APPDLPLILLAHNGPSGL 160 (238)
T ss_pred cCCCCCeEEEeCcCCcCC
Confidence 434445799999998654
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.9e-07 Score=71.81 Aligned_cols=45 Identities=38% Similarity=0.753 Sum_probs=41.3
Q ss_pred CCcccEEEEeCCcEEEEEcCCCC-CCCCCcEEEEECCCCCcEEEEccCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKLEPE 274 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g-~~~~ndv~~yDl~s~~~~W~~v~~~ 274 (975)
||++|+++++++ +|||+||.++ ...++++++||+.++ +|+.++++
T Consensus 1 pR~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~m 46 (47)
T PF01344_consen 1 PRSGHAAVVVGN-KIYVIGGYDGNNQPTNSVEVYDPETN--TWEELPPM 46 (47)
T ss_dssp -BBSEEEEEETT-EEEEEEEBESTSSBEEEEEEEETTTT--EEEEEEEE
T ss_pred CCccCEEEEECC-EEEEEeeecccCceeeeEEEEeCCCC--EEEEcCCC
Confidence 689999999998 8999999988 778999999999999 99999875
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.2e-07 Score=70.69 Aligned_cols=44 Identities=25% Similarity=0.532 Sum_probs=40.2
Q ss_pred CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE
Q 002047 174 PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (975)
Q Consensus 174 pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~ 219 (975)
||++|++++++++|||+||........+++++||+.+++ |+.++
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~ 44 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGNNQPTNSVEVYDPETNT--WEELP 44 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBESTSSBEEEEEEEETTTTE--EEEEE
T ss_pred CCccCEEEEECCEEEEEeeecccCceeeeEEEEeCCCCE--EEEcC
Confidence 699999999999999999998777889999999999985 99998
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.9e-06 Score=66.28 Aligned_cols=40 Identities=40% Similarity=0.572 Sum_probs=36.2
Q ss_pred CCCCccceEEEEeCCEEEEEeccCC-CCCccccEEEEEcCC
Q 002047 171 PPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQ 210 (975)
Q Consensus 171 ~P~pR~~hsa~~~~~~iyv~GG~~~-~~~~~~dv~~yD~~t 210 (975)
+|.+|++|++++++++|||+||... .....+|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGNNIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECCEEEEEcCccCCCCCEECcEEEEECCC
Confidence 4889999999999999999999983 677789999999876
|
|
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-06 Score=66.14 Aligned_cols=39 Identities=36% Similarity=0.701 Sum_probs=35.4
Q ss_pred CCCCCcccEEEEeCCcEEEEEcCCCC--CCCCCcEEEEECCC
Q 002047 224 GPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDTAA 263 (975)
Q Consensus 224 ~P~~R~~h~~~~~~~~~lyV~GG~~g--~~~~ndv~~yDl~s 263 (975)
+|.+|++|+++++++ +|||+||.++ ...++|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~-~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGN-NIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECC-EEEEEcCccCCCCCEECcEEEEECCC
Confidence 489999999999998 8999999984 67799999999976
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.7e-05 Score=75.69 Aligned_cols=117 Identities=23% Similarity=0.372 Sum_probs=81.6
Q ss_pred EEEecCCCCHHHHHHHH--HHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchh
Q 002047 701 KIFGDLHGQFGDLMRLF--DEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (975)
Q Consensus 701 ~vvGDiHG~~~~L~~ll--~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (975)
+++||+|+......... ........+ .+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~------~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPD------FVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCC------EEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 47999999999888764 221111112 68889999999988877665533444455568999999999
Q ss_pred hhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceecccc
Q 002047 779 ALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLW 858 (975)
Q Consensus 779 ~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllW 858 (975)
++++|..+.+...... ..
T Consensus 70 -----------------------------------------i~~~H~~~~~~~~~~~------------~~--------- 87 (131)
T cd00838 70 -----------------------------------------ILLTHGPPYDPLDELS------------PD--------- 87 (131)
T ss_pred -----------------------------------------EEEeccCCCCCchhhc------------cc---------
Confidence 8889998865411000 00
Q ss_pred CCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceE
Q 002047 859 SDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (975)
Q Consensus 859 sdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (975)
.......+...+...+..++|-||.-....+.
T Consensus 88 ---------------------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 ---------------------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ---------------------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00145677888999999999999998766554
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.1e-05 Score=77.48 Aligned_cols=58 Identities=24% Similarity=0.441 Sum_probs=41.8
Q ss_pred CEEEEecCC-CCHH-----HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccc
Q 002047 699 PIKIFGDLH-GQFG-----DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 699 ~i~vvGDiH-G~~~-----~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (975)
.|.||+|.| |.-. .+.++|+. ...+ .++.+||+++ .+++.+|..++ ..++.++|||
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d------~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~ 62 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQ------HVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDF 62 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCC------EEEECCCCCC-----HHHHHHHHhhC----CceEEEECCC
Confidence 478999999 6543 35555544 1122 6888999987 77777776652 2599999999
Q ss_pred cc
Q 002047 773 EA 774 (975)
Q Consensus 773 E~ 774 (975)
|.
T Consensus 63 D~ 64 (178)
T cd07394 63 DE 64 (178)
T ss_pred Cc
Confidence 97
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.6e-06 Score=86.46 Aligned_cols=71 Identities=11% Similarity=0.178 Sum_probs=56.2
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
++|.+++||||++..|.++++.+.....+ .+|++||++++|...-++..++..|... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D------~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGAD------AIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 46999999999999999999876432233 6899999999997777777777666432 34699999999985
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.7e-06 Score=63.62 Aligned_cols=47 Identities=30% Similarity=0.599 Sum_probs=40.0
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC
Q 002047 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT 185 (975)
Q Consensus 115 ~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~ 185 (975)
+||++||..... .++++++||+.+++|..++++ |.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~~---------------------~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ---------------------RLKSVEVYDPETNKWTPLPSM---PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc---------------------eeeeEEEECCCCCeEccCCCC---CCccccceEEEeCC
Confidence 489999985422 678999999999999999877 89999999998764
|
|
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.2e-05 Score=62.78 Aligned_cols=47 Identities=32% Similarity=0.471 Sum_probs=39.2
Q ss_pred EEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECC
Q 002047 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGD 416 (975)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~ 416 (975)
+|||+||..... ..+++++||+.+++|..+..+ +.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ----RLKSVEVYDPETNKWTPLPSM---------------------PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc----eeeeEEEECCCCCeEccCCCC---------------------CCccccceEEEeCC
Confidence 489999986532 378899999999999998877 56899999988764
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00069 Score=72.55 Aligned_cols=151 Identities=15% Similarity=0.234 Sum_probs=97.6
Q ss_pred EEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC----CCcEEEEccC-CCCC
Q 002047 203 LHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA----KPYEWRKLEP-EGEG 277 (975)
Q Consensus 203 v~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s----~~~~W~~v~~-~~~~ 277 (975)
-.+||+.+++ ++.+.+. .--+..+.+.+.++.+++.||.... ...+-.|++.. . .|..... +..
T Consensus 48 s~~yD~~tn~--~rpl~v~----td~FCSgg~~L~dG~ll~tGG~~~G--~~~ir~~~p~~~~~~~--~w~e~~~~m~~- 116 (243)
T PF07250_consen 48 SVEYDPNTNT--FRPLTVQ----TDTFCSGGAFLPDGRLLQTGGDNDG--NKAIRIFTPCTSDGTC--DWTESPNDMQS- 116 (243)
T ss_pred EEEEecCCCc--EEeccCC----CCCcccCcCCCCCCCEEEeCCCCcc--ccceEEEecCCCCCCC--CceECcccccC-
Confidence 3478999985 8777532 2223333345556689999998542 34677788765 4 7887754 433
Q ss_pred CCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCC---CCeEEEEECC---CCCCCCcceeeEEEeCCEEEEEcC
Q 002047 278 PPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR---DGRWEWAIAP---GVSPSPRYQHAAVFVNARLHVSGG 351 (975)
Q Consensus 278 P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~---~~~W~w~~~~---g~~P~~R~~hs~v~~~~~L~V~GG 351 (975)
+|.|.++....+|+++|+||... ..+.|.+.. ...+.|.-.. ...+...|-+..+.-+++|||++.
T Consensus 117 --~RWYpT~~~L~DG~vlIvGG~~~------~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an 188 (243)
T PF07250_consen 117 --GRWYPTATTLPDGRVLIVGGSNN------PTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFAN 188 (243)
T ss_pred --CCccccceECCCCCEEEEeCcCC------CcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEc
Confidence 48999999999999999999873 334454442 2223332221 122344555666666999999986
Q ss_pred cCCCCCccccCCcEEEEECCCCeE-EEcccCcC
Q 002047 352 ALGGGRMVEDSSSVAVLDTAAGVW-CDTKSVVT 383 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD~~t~~W-~~v~~~~~ 383 (975)
. +-.+||..++++ +.++.++.
T Consensus 189 ~-----------~s~i~d~~~n~v~~~lP~lPg 210 (243)
T PF07250_consen 189 R-----------GSIIYDYKTNTVVRTLPDLPG 210 (243)
T ss_pred C-----------CcEEEeCCCCeEEeeCCCCCC
Confidence 3 255799999987 67777643
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00072 Score=71.75 Aligned_cols=145 Identities=19% Similarity=0.222 Sum_probs=90.8
Q ss_pred CCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCc-----
Q 002047 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK----- 161 (975)
Q Consensus 87 ~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~----- 161 (975)
-.|+-|+=..+..-.+.+++ -...++.||.+.++. ..+.+|++...+..
T Consensus 18 YLPPLR~PAv~~~~~~~~~~------~~~YlIHGGrTPNNE--------------------lS~~LY~ls~~s~~cNkK~ 71 (337)
T PF03089_consen 18 YLPPLRCPAVCHLSDPSDGE------PEQYLIHGGRTPNNE--------------------LSSSLYILSVDSRGCNKKV 71 (337)
T ss_pred cCCCCCCccEeeecCCCCCC------eeeEEecCCcCCCcc--------------------cccceEEEEeecCCCCcee
Confidence 45666665544442333221 234566788877653 77788888765433
Q ss_pred ---EEEecCCCCCCCCccceEEEEe---C-CEEEEEeccCCC--CC-----------ccccEEEEEcCCCCCcEEEEEec
Q 002047 162 ---WSRITPFGEPPTPRAAHVATAV---G-TMVVIQGGIGPA--GL-----------SAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 162 ---W~~l~~~g~~P~pR~~hsa~~~---~-~~iyv~GG~~~~--~~-----------~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
...-.-.|+.|.+|++|++.++ | ..+++|||...- +. +...|+.+|+.-.-..-..++
T Consensus 72 tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRTTenWNsVvDC~P~VfLiDleFGC~tah~lp-- 149 (337)
T PF03089_consen 72 TLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRTTENWNSVVDCPPQVFLIDLEFGCCTAHTLP-- 149 (337)
T ss_pred EEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccchhhcceeccCCCeEEEEeccccccccccch--
Confidence 3333456889999999999988 2 378999997522 11 234567778764321123344
Q ss_pred CCCCCCCcccEEEEeCCcEEEEEcCCCC--CCCCCcEEEEEC
Q 002047 222 GPGPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDT 261 (975)
Q Consensus 222 g~~P~~R~~h~~~~~~~~~lyV~GG~~g--~~~~ndv~~yDl 261 (975)
.+..+..-|.+..-++ .+|++||..- +..-..++++..
T Consensus 150 -El~dG~SFHvslar~D-~VYilGGHsl~sd~Rpp~l~rlkV 189 (337)
T PF03089_consen 150 -ELQDGQSFHVSLARND-CVYILGGHSLESDSRPPRLYRLKV 189 (337)
T ss_pred -hhcCCeEEEEEEecCc-eEEEEccEEccCCCCCCcEEEEEE
Confidence 5566778888888887 9999999743 333445666533
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00027 Score=72.77 Aligned_cols=65 Identities=25% Similarity=0.323 Sum_probs=44.2
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-HHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-LETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 700 i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
|.+++||||++..|.+ ..+.....+ -+|+.||++++|... .+.+..|.. .+..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD------AVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC------EEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 222211222 688999999998763 333333332 2446999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0017 Score=69.57 Aligned_cols=139 Identities=15% Similarity=0.193 Sum_probs=91.1
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCC--CCCcEEEEEecCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ--QRPRWHRVVVQGPGP 225 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t--~~~~W~~v~~~g~~P 225 (975)
...-..||+.+++++.+... .--.+.+.+.+ ++++++.||...+ ...+..|++.+ ....|.+.. ..|-
T Consensus 45 ~a~s~~yD~~tn~~rpl~v~----td~FCSgg~~L~dG~ll~tGG~~~G---~~~ir~~~p~~~~~~~~w~e~~--~~m~ 115 (243)
T PF07250_consen 45 PAHSVEYDPNTNTFRPLTVQ----TDTFCSGGAFLPDGRLLQTGGDNDG---NKAIRIFTPCTSDGTCDWTESP--NDMQ 115 (243)
T ss_pred eEEEEEEecCCCcEEeccCC----CCCcccCcCCCCCCCEEEeCCCCcc---ccceEEEecCCCCCCCCceECc--cccc
Confidence 45566899999999998754 22333333333 5699999998653 34677788765 123588775 2489
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC---CCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA---AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~---s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
.+|...+++.+.+++++|+||... ...+.+... ...+.|..+......-+.-.|-...+..+|+||+|+..
T Consensus 116 ~~RWYpT~~~L~DG~vlIvGG~~~----~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~ 189 (243)
T PF07250_consen 116 SGRWYPTATTLPDGRVLIVGGSNN----PTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR 189 (243)
T ss_pred CCCccccceECCCCCEEEEeCcCC----CcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC
Confidence 999999999999999999999873 122333321 12234444433222222345667778889999999874
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.81 E-value=5e-05 Score=77.07 Aligned_cols=67 Identities=27% Similarity=0.236 Sum_probs=45.2
Q ss_pred EEEEecCCCCHHHHHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 700 IKIFGDLHGQFGDLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 700 i~vvGDiHG~~~~L~~ll~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
+.+++|||+....+...+.. ......+ -++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d------~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDAD------ILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCC------EEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 46899999998877665431 1111112 5888999999987765544 2222 23345799999999986
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0039 Score=66.34 Aligned_cols=122 Identities=20% Similarity=0.268 Sum_probs=78.5
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCC-C-c----EEEEEecCCCCCCCcccEEEEeC---CcEEEEEcCCCC-------
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQR-P-R----WHRVVVQGPGPGPRYGHVMALVG---QRYLMAIGGNDG------- 249 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~-~-~----W~~v~~~g~~P~~R~~h~~~~~~---~~~lyV~GG~~g------- 249 (975)
..+|.||..+.+...+.+|++.+.+.. . | ..+-...|..|.+||+|++.++. ...+++|||..-
T Consensus 40 ~YlIHGGrTPNNElS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRT 119 (337)
T PF03089_consen 40 QYLIHGGRTPNNELSSSLYILSVDSRGCNKKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRT 119 (337)
T ss_pred eEEecCCcCCCcccccceEEEEeecCCCCceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccc
Confidence 456779999988889999999887542 1 1 22333568999999999998873 336889999731
Q ss_pred -------CCCCCcEEEEECCCCCcEEEE--ccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC-CCccceEEe
Q 002047 250 -------KRPLADVWALDTAAKPYEWRK--LEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGL 313 (975)
Q Consensus 250 -------~~~~ndv~~yDl~s~~~~W~~--v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~-~~l~d~~~~ 313 (975)
-.+...|+.+|++-. .++. ++-... ....+.+...++.+|+.||..-.. ...-.++++
T Consensus 120 TenWNsVvDC~P~VfLiDleFG--C~tah~lpEl~d----G~SFHvslar~D~VYilGGHsl~sd~Rpp~l~rl 187 (337)
T PF03089_consen 120 TENWNSVVDCPPQVFLIDLEFG--CCTAHTLPELQD----GQSFHVSLARNDCVYILGGHSLESDSRPPRLYRL 187 (337)
T ss_pred hhhcceeccCCCeEEEEecccc--ccccccchhhcC----CeEEEEEEecCceEEEEccEEccCCCCCCcEEEE
Confidence 113456788888665 3322 222222 244455556699999999974322 233344544
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.006 Score=65.34 Aligned_cols=206 Identities=7% Similarity=0.061 Sum_probs=114.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccce-EEEEeC----C-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAH-VATAVG----T-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~h-sa~~~~----~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
..++++||.|++|..++....++.....+ .+..++ + ||+.+...... .....+++|++.++. |+.+...
T Consensus 14 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~-~~~~~~~Vys~~~~~--Wr~~~~~-- 88 (230)
T TIGR01640 14 KRLVVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGN-RNQSEHQVYTLGSNS--WRTIECS-- 88 (230)
T ss_pred CcEEEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCC-CCCccEEEEEeCCCC--ccccccC--
Confidence 36899999999999997541110001111 111222 2 67766543211 133578999999885 9988622
Q ss_pred CCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEE-ccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 224 ~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.+........+.+++ .||-+.-.........|..||+.+. +|.. +..... .............+|+|.++.....
T Consensus 89 ~~~~~~~~~~v~~~G-~lyw~~~~~~~~~~~~IvsFDl~~E--~f~~~i~~P~~-~~~~~~~~~L~~~~G~L~~v~~~~~ 164 (230)
T TIGR01640 89 PPHHPLKSRGVCING-VLYYLAYTLKTNPDYFIVSFDVSSE--RFKEFIPLPCG-NSDSVDYLSLINYKGKLAVLKQKKD 164 (230)
T ss_pred CCCccccCCeEEECC-EEEEEEEECCCCCcEEEEEEEcccc--eEeeeeecCcc-ccccccceEEEEECCEEEEEEecCC
Confidence 122122222556676 7888764332222236999999999 8985 433211 1101123445566788888765432
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcc----eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCC
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY----QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~----~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~ 373 (975)
. ..-++|.+.+.....|+..-.-+.++.+.. ....+..+++|++.... .. ..-+..||++++
T Consensus 165 ~--~~~~IWvl~d~~~~~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~~-~~------~~~~~~y~~~~~ 230 (230)
T TIGR01640 165 T--NNFDLWVLNDAGKQEWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCED-EN------PFYIFYYNVGEN 230 (230)
T ss_pred C--CcEEEEEECCCCCCceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeCC-CC------ceEEEEEeccCC
Confidence 2 126899987665566764333332222222 23456667888887642 10 113888998875
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00018 Score=77.76 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=47.0
Q ss_pred CCEEEEecCCCCH------HHHHHHHHHhCCCCCCCCccceeEEEeccccCC--C-----CChHHHHHHHHHhhhcCCCC
Q 002047 698 APIKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR--G-----QHSLETITLLLALKVEYPNN 764 (975)
Q Consensus 698 ~~i~vvGDiHG~~------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDR--G-----~~s~evl~ll~~lk~~~P~~ 764 (975)
|++++++|+|... ..|.++|+.... ..+ .++++||++|. | +...+++.+|..|+.. +..
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~-~~d------~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~ 72 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEAR-QAD------ALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVP 72 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhc-cCC------EEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCe
Confidence 5789999999542 235555543211 112 68889999985 2 2346777777777543 246
Q ss_pred EEEEecccccc
Q 002047 765 VHLIRGNHEAA 775 (975)
Q Consensus 765 v~llrGNHE~~ 775 (975)
|++++||||..
T Consensus 73 v~~v~GNHD~~ 83 (241)
T PRK05340 73 CYFMHGNRDFL 83 (241)
T ss_pred EEEEeCCCchh
Confidence 99999999973
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00053 Score=66.68 Aligned_cols=107 Identities=17% Similarity=0.236 Sum_probs=73.0
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhh
Q 002047 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780 (975)
Q Consensus 701 ~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~ 780 (975)
.||+|.||..+.+.+++... ...+ .++++||+. .+++.++..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~~~d------~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--EGVD------LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------- 56 (129)
T ss_pred CeeccccCccccchHHHhhC--CCCC------EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------
Confidence 38999999988777766652 2222 799999984 35566666542 224899999999
Q ss_pred cCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCC
Q 002047 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSD 860 (975)
Q Consensus 781 ~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsd 860 (975)
-+++++|+-+... ... +
T Consensus 57 -------------------------------------~~Ilv~H~pp~~~----------------~~~----------~ 73 (129)
T cd07403 57 -------------------------------------VDILLTHAPPAGI----------------GDG----------E 73 (129)
T ss_pred -------------------------------------cCEEEECCCCCcC----------------cCc----------c
Confidence 3789999743210 000 0
Q ss_pred CCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceE
Q 002047 861 PTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (975)
Q Consensus 861 P~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (975)
. . ..-|.+.+.++++..+.++++-||.-....+.
T Consensus 74 --~------~---------~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 --D------F---------AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred --c------c---------cccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 0 12356788899999999999999998877665
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=1.8e-05 Score=89.69 Aligned_cols=243 Identities=12% Similarity=0.005 Sum_probs=160.1
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCCeeeecC----CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC
Q 002047 670 FLDCNEIADLCDSAERIFSSEPSVLQLKA----PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ 745 (975)
Q Consensus 670 ~l~~~~i~~l~~~~~~~~~~ep~~l~l~~----~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~ 745 (975)
.|...++..+++-+.+++..+|+...+.. -.+.++|.||.+.|+.+.++.- +... .-|++-|++|+++.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d---P~~~----K~Y~rrg~a~m~l~ 86 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD---PTYI----KAYVRRGTAVMALG 86 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC---chhh----heeeeccHHHHhHH
Confidence 46778889999999999999998887642 3788999999999999988764 2211 15999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecC
Q 002047 746 HSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHG 825 (975)
Q Consensus 746 ~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHg 825 (975)
...+.+..|...+...|+...+.|++||+..+-..++|..+....+++. ...++..+...+.. |++..+.+.++=-|
T Consensus 87 ~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~- 163 (476)
T KOG0376|consen 87 EFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH- 163 (476)
T ss_pred HHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-
Confidence 9999999999999999999999999999999988899998887777654 22333333333222 14445554333322
Q ss_pred CccCc--------------c-----cCH-hhhh----hccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceee
Q 002047 826 GIGRS--------------I-----NHV-EQIE----NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVT 881 (975)
Q Consensus 826 Gi~~~--------------~-----~~~-~~i~----~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~ 881 (975)
-+... + .++ ++.. .+..+.++ .+-.|..|+++... -..+-...++.+ ..
T Consensus 164 kvt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~----~~~~d~~~sv~gd~--hGqfydl~nif~-l~ 236 (476)
T KOG0376|consen 164 KVTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI----SVPGDVKISVCGDT--HGQFYDLLNIFE-LN 236 (476)
T ss_pred hhhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe----ecCCCceEEecCCc--cccccchhhhHh-hc
Confidence 11100 0 000 0111 11111111 14457788888642 122333355554 34
Q ss_pred eCHHHHHHHHHHcCCeEEEEecccc-----------ccc-eEEec---CCeEEEEeccccccC
Q 002047 882 FGPDRVMEFCNNNDLQLIVRAHECV-----------MDG-FERFA---QGHLITLFSATNYCG 929 (975)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~-----------~~G-~~~~~---~~~~iTvfSa~~y~~ 929 (975)
.+++....||.+.++.-+++.|.-+ +++ |...+ .+.++++|+++.++-
T Consensus 237 g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 237 GLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 5677778888888888888888654 222 22111 235889999988763
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0017 Score=64.11 Aligned_cols=29 Identities=10% Similarity=0.167 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceE
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (975)
+.+.+.+++++.+.++++-||.-....+.
T Consensus 101 ~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 101 DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 55678889999999999999997755544
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00031 Score=77.34 Aligned_cols=70 Identities=20% Similarity=0.082 Sum_probs=50.0
Q ss_pred CCEEEEecCCCC----HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCC--CChHHHHHHHHHhhhcCCCCEEEEecc
Q 002047 698 APIKIFGDLHGQ----FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG--QHSLETITLLLALKVEYPNNVHLIRGN 771 (975)
Q Consensus 698 ~~i~vvGDiHG~----~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG--~~s~evl~ll~~lk~~~P~~v~llrGN 771 (975)
.+|.+++|||.. ...+.++++.......+ -++++|||+|++ ....+++.+|..|+... .++.+.||
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD------lVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GN 121 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPD------LILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGN 121 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC------EEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCC
Confidence 579999999976 45577777765432222 688899999954 23345667777776544 49999999
Q ss_pred cccc
Q 002047 772 HEAA 775 (975)
Q Consensus 772 HE~~ 775 (975)
||..
T Consensus 122 HD~~ 125 (271)
T PRK11340 122 HDRP 125 (271)
T ss_pred CCcc
Confidence 9973
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.009 Score=63.40 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=38.9
Q ss_pred eCHHHHHHHHHHc-CCeEEEEeccccccceEEe-----cCCeEEEEeccccccCCCCC-cEEEEEEcCC-ceEEeEEecC
Q 002047 882 FGPDRVMEFCNNN-DLQLIVRAHECVMDGFERF-----AQGHLITLFSATNYCGTANN-AGAILVLGRD-LVVVPKLIHP 953 (975)
Q Consensus 882 fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~-----~~~~~iTvfSa~~y~~~~~n-~ga~l~i~~~-~~~~~~~~~~ 953 (975)
.+...+.+.++++ ++++++-||.-. .+.... .++.+..+++........+| .=.++.++.+ .++.++.+.|
T Consensus 135 ~~~~~~~~ll~~~~~V~~v~~GH~H~-~~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 135 DGQQIWDKLVKKNDNVFMVLSGHVHG-AGRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred cHHHHHHHHHhCCCCEEEEEccccCC-CceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 4566788889888 899999999654 333332 13345555432211111111 1144555555 4666666554
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0062 Score=62.00 Aligned_cols=65 Identities=17% Similarity=0.252 Sum_probs=43.8
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
++|.|++|.||...+..+.++.......+ -+|.+||++...... +|......+++.+|||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d------~vih~GD~~~~~~~~--------~l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVD------AVIHAGDSTSPFTLD--------ALEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCC------EEEECCCcCCccchH--------HhhcccccceEEEEccCCCcc
Confidence 67899999999997555555544333333 578899999865432 111102368999999999843
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00035 Score=74.35 Aligned_cols=70 Identities=30% Similarity=0.300 Sum_probs=49.9
Q ss_pred CCEEEEecCCCCHH----HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH-HHHHHHHHhhhcCCCCEEEEeccc
Q 002047 698 APIKIFGDLHGQFG----DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-ETITLLLALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 698 ~~i~vvGDiHG~~~----~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-evl~ll~~lk~~~P~~v~llrGNH 772 (975)
.+|.+++|+|.... .+.++++.+.....+ -+|++||++|.+.... ++..++..++ .+..++++.|||
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d------~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNH 73 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPD------LVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNH 73 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCC------EEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCc
Confidence 47899999998743 666777665432222 6888999999987765 5555555543 234699999999
Q ss_pred ccc
Q 002047 773 EAA 775 (975)
Q Consensus 773 E~~ 775 (975)
|..
T Consensus 74 D~~ 76 (223)
T cd07385 74 DYY 76 (223)
T ss_pred ccc
Confidence 984
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00086 Score=72.05 Aligned_cols=180 Identities=12% Similarity=0.135 Sum_probs=89.4
Q ss_pred EEEEecCCCCH------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCC--C---C--hHHHHHHHHHhhhcCCCCEE
Q 002047 700 IKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG--Q---H--SLETITLLLALKVEYPNNVH 766 (975)
Q Consensus 700 i~vvGDiHG~~------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG--~---~--s~evl~ll~~lk~~~P~~v~ 766 (975)
+++++|+|... ..|++.|..... ..+ .+|++||++|.. . . ..+++.+|..|+.. +..|+
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d------~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KAD------ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCC------EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEE
Confidence 36899999543 234444444321 122 688899999952 1 1 23556666666543 35799
Q ss_pred EEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCccc-CHhhhhhccC-Cc
Q 002047 767 LIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSIN-HVEQIENLQR-PI 844 (975)
Q Consensus 767 llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~-~~~~i~~i~r-p~ 844 (975)
+++||||...-. ...+..| ..++..--..-+-+.+++++||-.-..-. ...-.+++-| |.
T Consensus 73 ~v~GNHD~~~~~-------~~~~~~g-----------i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~ 134 (231)
T TIGR01854 73 FMHGNRDFLIGK-------RFAREAG-----------MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPW 134 (231)
T ss_pred EEcCCCchhhhH-------HHHHHCC-----------CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHH
Confidence 999999973211 0111111 11222211112235689999997643111 1111122211 11
Q ss_pred cc------CC-CCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEE
Q 002047 845 TM------EA-GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912 (975)
Q Consensus 845 ~~------~~-~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~ 912 (975)
.. +. ....+...+++-.... .. .+..-.....+..+.++++..+.+++|-||.-.+.=+..
T Consensus 135 ~~~~~~~l~~~~r~~l~~~~~~~s~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~ 202 (231)
T TIGR01854 135 LQRLFLHLPLAVRVKLARKIRAESRAD---KQ----MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPL 202 (231)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHh---cC----CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeec
Confidence 00 00 0001223333321110 00 000012334678889999999999999999866544433
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.34 Score=56.29 Aligned_cols=187 Identities=17% Similarity=0.178 Sum_probs=102.1
Q ss_pred cEEEEECCCCc--EEEecCCCC-----CCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC
Q 002047 151 DVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
.+++||..+++ |+.-..... .+.++..-+.++.+++||+.+. ...++.+|..+....|+.-.
T Consensus 80 ~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~---- 148 (394)
T PRK11138 80 LVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSE-------KGQVYALNAEDGEVAWQTKV---- 148 (394)
T ss_pred eEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcC-------CCEEEEEECCCCCCcccccC----
Confidence 67889987654 875432100 0012333345666788887543 24699999988777797643
Q ss_pred CCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC
Q 002047 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (975)
Q Consensus 224 ~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~ 303 (975)
+..- ..+-++.++ .+|+..+ -..++.||+.+....|+.-...+. ...+...+-++.++.+|+..+ +
T Consensus 149 -~~~~-~ssP~v~~~-~v~v~~~------~g~l~ald~~tG~~~W~~~~~~~~--~~~~~~~sP~v~~~~v~~~~~-~-- 214 (394)
T PRK11138 149 -AGEA-LSRPVVSDG-LVLVHTS------NGMLQALNESDGAVKWTVNLDVPS--LTLRGESAPATAFGGAIVGGD-N-- 214 (394)
T ss_pred -CCce-ecCCEEECC-EEEEECC------CCEEEEEEccCCCEeeeecCCCCc--ccccCCCCCEEECCEEEEEcC-C--
Confidence 1111 122234454 7777543 136999999998888987543211 000111222344677666433 1
Q ss_pred CCCccceEEeecCCCCeEEEEECCCCCCC----Cc---ceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCC--e
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPS----PR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--V 374 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g~~P~----~R---~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~ 374 (975)
..++.++.. +++-.|......+.. .| ...+-++.++.+|+.+. ...++++|++++ .
T Consensus 215 ----g~v~a~d~~-~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~----------~g~l~ald~~tG~~~ 279 (394)
T PRK11138 215 ----GRVSAVLME-QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAY----------NGNLVALDLRSGQIV 279 (394)
T ss_pred ----CEEEEEEcc-CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEc----------CCeEEEEECCCCCEE
Confidence 234555443 444455433221111 01 12344567888888642 234899999987 4
Q ss_pred EEE
Q 002047 375 WCD 377 (975)
Q Consensus 375 W~~ 377 (975)
|+.
T Consensus 280 W~~ 282 (394)
T PRK11138 280 WKR 282 (394)
T ss_pred Eee
Confidence 764
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0014 Score=70.86 Aligned_cols=68 Identities=26% Similarity=0.215 Sum_probs=46.3
Q ss_pred CEEEEecCCCCH------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccc
Q 002047 699 PIKIFGDLHGQF------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 699 ~i~vvGDiHG~~------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (975)
+|.+++|+|.++ ..|.++++.+.-...+ -+|+.||++++.....+++..|..+ .+..|+++.|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d------~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKID------HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCC------EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCC
Confidence 478999999764 1245566655322222 6889999999876666655555543 334699999999
Q ss_pred ccc
Q 002047 773 EAA 775 (975)
Q Consensus 773 E~~ 775 (975)
|..
T Consensus 72 D~~ 74 (239)
T TIGR03729 72 DML 74 (239)
T ss_pred CCC
Confidence 974
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0026 Score=64.74 Aligned_cols=40 Identities=35% Similarity=0.535 Sum_probs=29.9
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
.+|++||+++++..... +.+|.++ +..+++++||||....
T Consensus 45 ~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 45 TVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred EEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 79999999999986644 4444433 3469999999997543
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0013 Score=67.38 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=27.0
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 733 DYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
.+|++||++|..... .+...+-+.........+++++||||..
T Consensus 44 ~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 44 RLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred EEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 799999999865433 2222211111223345799999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.042 Score=60.12 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcE-EEEEEcCC
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG-AILVLGRD 943 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~g-a~l~i~~~ 943 (975)
...+.+.|++.++++++-||.-....... +|--+.+-.++.++....+.| .++.++++
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 253 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTED 253 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCC
Confidence 34677788899999999999987665432 342222223333332223333 35556544
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0045 Score=74.04 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=61.2
Q ss_pred cCCEEEEecCC-CCH----HHHHHHHHHhC-CCCCCCC--ccceeEEEeccccCC-CCCh---------------HHHHH
Q 002047 697 KAPIKIFGDLH-GQF----GDLMRLFDEYG-SPSTAGD--IAYIDYLFLGDYVDR-GQHS---------------LETIT 752 (975)
Q Consensus 697 ~~~i~vvGDiH-G~~----~~L~~ll~~~g-~~~~~~~--~~~~~~vfLGDyVDR-G~~s---------------~evl~ 752 (975)
...+++++||| |.. ..+..+++.+. ......+ -.-..+|++||+||. |.+. .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35789999999 653 22344444332 2111000 001178999999994 3211 13445
Q ss_pred HHHHhhhcCCCCEEEEeccccccchhhhc-CChHHHHHHhCCcccchhhhhhhccccccceEEEEc-ceEEEecCCc
Q 002047 753 LLLALKVEYPNNVHLIRGNHEAADINALF-GFRIECIERMGERDGIWAWHRINRLFNWLPLAALIE-KKIICMHGGI 827 (975)
Q Consensus 753 ll~~lk~~~P~~v~llrGNHE~~~~~~~~-gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi 827 (975)
+|..|.. .-.|++++||||........ .+.......+.. .-..++.. |....++ .+++++||-.
T Consensus 323 ~L~~L~~--~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~--------~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIPE--DIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE--------HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhhc--CCeEEEecCCCcchhhccCCCCccHHHHHhcCc--------CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 5555432 23699999999975533221 122222111111 11223333 6544444 4889999965
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0024 Score=69.55 Aligned_cols=72 Identities=25% Similarity=0.295 Sum_probs=46.3
Q ss_pred CCEEEEecCC-CC-----------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHH----HHHHHhhhcC
Q 002047 698 APIKIFGDLH-GQ-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI----TLLLALKVEY 761 (975)
Q Consensus 698 ~~i~vvGDiH-G~-----------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl----~ll~~lk~~~ 761 (975)
++++.++|+| |. +..|.++++.+.....+ .+|+.||++|+...+.+.. .+|..|+...
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D------~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~ 74 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQID------ALLVAGDVFDTANPPAEAQELFNAFFRNLSDAN 74 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 5789999999 32 22344555444222222 6889999999886655433 3444554443
Q ss_pred CCCEEEEecccccc
Q 002047 762 PNNVHLIRGNHEAA 775 (975)
Q Consensus 762 P~~v~llrGNHE~~ 775 (975)
|-.|+++.||||..
T Consensus 75 ~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 75 PIPIVVISGNHDSA 88 (253)
T ss_pred CceEEEEccCCCCh
Confidence 35699999999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0022 Score=67.95 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=46.0
Q ss_pred CEEEEecCC-CCH--------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcC--
Q 002047 699 PIKIFGDLH-GQF--------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY-- 761 (975)
Q Consensus 699 ~i~vvGDiH-G~~--------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~-- 761 (975)
+|+.++|+| |.. ..|.++++.+.....+ .+|+.||++|....+.+.+..+...-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVD------FVLIAGDLFDSNNPSPEALELLIEALRRLKE 74 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCC------EEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 578999999 432 2355565554332222 58999999998875554443333322222
Q ss_pred -CCCEEEEeccccccch
Q 002047 762 -PNNVHLIRGNHEAADI 777 (975)
Q Consensus 762 -P~~v~llrGNHE~~~~ 777 (975)
.-.++++.||||....
T Consensus 75 ~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 75 AGIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCCEEEecCCCCCccc
Confidence 3469999999998654
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0032 Score=69.18 Aligned_cols=73 Identities=23% Similarity=0.350 Sum_probs=47.4
Q ss_pred CEEEEecCC-CC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-hHHHHHHHHHhhhcCCCC
Q 002047 699 PIKIFGDLH-GQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-SLETITLLLALKVEYPNN 764 (975)
Q Consensus 699 ~i~vvGDiH-G~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s~evl~ll~~lk~~~P~~ 764 (975)
++.+++|+| +. ...|.++++.+.....+ -+|++||+++.|.. +.+-+..++++-...+-.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d------~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p 75 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLD------FVVQLGDIIDGDNARAEEALDAVLAILDRLKGP 75 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCC------EEEECCCeecCCCchHHHHHHHHHHHHHhcCCC
Confidence 578999999 22 35666777766432222 58889999998873 223333333333333346
Q ss_pred EEEEeccccccch
Q 002047 765 VHLIRGNHEAADI 777 (975)
Q Consensus 765 v~llrGNHE~~~~ 777 (975)
++++.||||....
T Consensus 76 ~~~v~GNHD~~~~ 88 (267)
T cd07396 76 VHHVLGNHDLYNP 88 (267)
T ss_pred EEEecCccccccc
Confidence 9999999998643
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.96 Score=48.00 Aligned_cols=181 Identities=19% Similarity=0.222 Sum_probs=104.9
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEE-EEecCCCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR-VVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~-v~~~g~~P~ 226 (975)
..+++||..+++ |+.-... +.....+..++.||+..+ .+.++.+|..+....|+. .......+
T Consensus 46 ~~l~~~d~~tG~~~W~~~~~~------~~~~~~~~~~~~v~v~~~-------~~~l~~~d~~tG~~~W~~~~~~~~~~~- 111 (238)
T PF13360_consen 46 GNLYALDAKTGKVLWRFDLPG------PISGAPVVDGGRVYVGTS-------DGSLYALDAKTGKVLWSIYLTSSPPAG- 111 (238)
T ss_dssp SEEEEEETTTSEEEEEEECSS------CGGSGEEEETTEEEEEET-------TSEEEEEETTTSCEEEEEEE-SSCTCS-
T ss_pred CEEEEEECCCCCEEEEeeccc------cccceeeecccccccccc-------eeeeEecccCCcceeeeeccccccccc-
Confidence 489999998775 7765422 222224677888888863 237999998887778984 43211111
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCC----cceeEEEEEeCCeEEEecCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP----CMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~----r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.+......+.++ .+|+... -..++.+|+++....|+.-...+....+ .......++.++.+|++.+...
T Consensus 112 ~~~~~~~~~~~~-~~~~~~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ 184 (238)
T PF13360_consen 112 VRSSSSPAVDGD-RLYVGTS------SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGR 184 (238)
T ss_dssp TB--SEEEEETT-EEEEEET------CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSS
T ss_pred cccccCceEecC-EEEEEec------cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCe
Confidence 233444444454 6666543 3579999999988889885533221000 0112334455678888766432
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
+..+ +..++.-.|...... ........++.||+.. . ...++++|++|++
T Consensus 185 -------~~~~-d~~tg~~~w~~~~~~-----~~~~~~~~~~~l~~~~-~---------~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 185 -------VVAV-DLATGEKLWSKPISG-----IYSLPSVDGGTLYVTS-S---------DGRLYALDLKTGK 233 (238)
T ss_dssp -------EEEE-ETTTTEEEEEECSS------ECECEECCCTEEEEEE-T---------TTEEEEEETTTTE
T ss_pred -------EEEE-ECCCCCEEEEecCCC-----ccCCceeeCCEEEEEe-C---------CCEEEEEECCCCC
Confidence 5666 445555446333111 1222455677888765 2 2459999999984
|
... |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0032 Score=71.67 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=45.4
Q ss_pred CCEEEEecCC-C-----------CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCC-CChHHHHHHHHH----hhhc
Q 002047 698 APIKIFGDLH-G-----------QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG-QHSLETITLLLA----LKVE 760 (975)
Q Consensus 698 ~~i~vvGDiH-G-----------~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~----lk~~ 760 (975)
++++.++|+| | +...|.++++.+.-...+ .+|+.||++|+. +.+.+++.++.. +-..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD------~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~ 74 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGIT------TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKE 74 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCC------EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5789999999 4 223445555544322222 688899999985 455555444433 1122
Q ss_pred CCCCEEEEecccccc
Q 002047 761 YPNNVHLIRGNHEAA 775 (975)
Q Consensus 761 ~P~~v~llrGNHE~~ 775 (975)
.+-.|++|.||||..
T Consensus 75 ~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 75 AGITLHVLVGNHDMY 89 (340)
T ss_pred CCCeEEEEccCCCcc
Confidence 345799999999974
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0049 Score=65.18 Aligned_cols=28 Identities=7% Similarity=0.025 Sum_probs=21.6
Q ss_pred eCHHHHHHHHHHcCCeEEEEeccccccc
Q 002047 882 FGPDRVMEFCNNNDLQLIVRAHECVMDG 909 (975)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~~G 909 (975)
.....+.+.++..+.+++|-||.-...-
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 203 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRPAL 203 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCe
Confidence 3455677778899999999999876443
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.059 Score=59.46 Aligned_cols=74 Identities=27% Similarity=0.328 Sum_probs=50.3
Q ss_pred CCEEEEecCCCC------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHh--hhcCCCCEEEEe
Q 002047 698 APIKIFGDLHGQ------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL--KVEYPNNVHLIR 769 (975)
Q Consensus 698 ~~i~vvGDiHG~------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~l--k~~~P~~v~llr 769 (975)
++|..|.|+|-- ...+..+++.+.....+ -+|+.||+.++|. ..| ...+..+ +...+..+++++
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D------~~v~tGDl~~~~~-~~~-~~~~~~~l~~~~~~~~~~~vp 72 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPD------LLVVTGDLTNDGE-PEE-YRRLKELLARLELPAPVIVVP 72 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCC------EEEEccCcCCCCC-HHH-HHHHHHHHhhccCCCceEeeC
Confidence 368899999977 34556666777644333 6899999999963 222 2222222 236677899999
Q ss_pred ccccccchhh
Q 002047 770 GNHEAADINA 779 (975)
Q Consensus 770 GNHE~~~~~~ 779 (975)
||||....+.
T Consensus 73 GNHD~~~~~~ 82 (301)
T COG1409 73 GNHDARVVNG 82 (301)
T ss_pred CCCcCCchHH
Confidence 9999976654
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0042 Score=67.77 Aligned_cols=70 Identities=20% Similarity=0.328 Sum_probs=44.0
Q ss_pred EEEEecCCCCHHHHHHHHHHhCC---CCCCCCccceeEEEeccccCCCC-ChHHHHH------HHHHh------hhcCCC
Q 002047 700 IKIFGDLHGQFGDLMRLFDEYGS---PSTAGDIAYIDYLFLGDYVDRGQ-HSLETIT------LLLAL------KVEYPN 763 (975)
Q Consensus 700 i~vvGDiHG~~~~L~~ll~~~g~---~~~~~~~~~~~~vfLGDyVDRG~-~s~evl~------ll~~l------k~~~P~ 763 (975)
|+|+||+||+++.|.+.++.... .+.+ -+|++||+-..+. ..++.+. -+..+ ....|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D------~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVD------LLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPI 74 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCc------EEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCe
Confidence 68999999999988775554321 1222 5888999975443 3333331 11111 233566
Q ss_pred CEEEEecccccc
Q 002047 764 NVHLIRGNHEAA 775 (975)
Q Consensus 764 ~v~llrGNHE~~ 775 (975)
-+++|-||||..
T Consensus 75 ~t~fi~GNHE~~ 86 (262)
T cd00844 75 LTIFIGGNHEAS 86 (262)
T ss_pred eEEEECCCCCCH
Confidence 689999999974
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.58 Score=54.39 Aligned_cols=180 Identities=17% Similarity=0.222 Sum_probs=101.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec--CCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~--g~~P 225 (975)
+.++.||+.+++ |+.-.... ....+...+-++.++.+|+..+ ...++.+|..+....|+.-... +...
T Consensus 170 g~l~ald~~tG~~~W~~~~~~~-~~~~~~~~sP~v~~~~v~~~~~-------~g~v~a~d~~~G~~~W~~~~~~~~~~~~ 241 (394)
T PRK11138 170 GMLQALNESDGAVKWTVNLDVP-SLTLRGESAPATAFGGAIVGGD-------NGRVSAVLMEQGQLIWQQRISQPTGATE 241 (394)
T ss_pred CEEEEEEccCCCEeeeecCCCC-cccccCCCCCEEECCEEEEEcC-------CCEEEEEEccCChhhheeccccCCCccc
Confidence 468999998775 87754320 0111222233445667666443 2468889998876678753211 1000
Q ss_pred CCC---cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 226 GPR---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 226 ~~R---~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
..| ...+-++.++ .+|+.+. + ..++++|+.+....|+.-.. .. ...++.+++||+....
T Consensus 242 ~~~~~~~~~sP~v~~~-~vy~~~~-~-----g~l~ald~~tG~~~W~~~~~--~~-------~~~~~~~~~vy~~~~~-- 303 (394)
T PRK11138 242 IDRLVDVDTTPVVVGG-VVYALAY-N-----GNLVALDLRSGQIVWKREYG--SV-------NDFAVDGGRIYLVDQN-- 303 (394)
T ss_pred hhcccccCCCcEEECC-EEEEEEc-C-----CeEEEEECCCCCEEEeecCC--Cc-------cCcEEECCEEEEEcCC--
Confidence 001 1123344555 7887653 2 36999999988778986321 11 1234568899987531
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
..++.++.. +++-.|.... ...+...+.++.+++||+... ...++++|+.+++
T Consensus 304 -----g~l~ald~~-tG~~~W~~~~---~~~~~~~sp~v~~g~l~v~~~----------~G~l~~ld~~tG~ 356 (394)
T PRK11138 304 -----DRVYALDTR-GGVELWSQSD---LLHRLLTAPVLYNGYLVVGDS----------EGYLHWINREDGR 356 (394)
T ss_pred -----CeEEEEECC-CCcEEEcccc---cCCCcccCCEEECCEEEEEeC----------CCEEEEEECCCCC
Confidence 346777654 4444454321 112333445667899987532 2348899998874
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.43 E-value=1.6 Score=46.25 Aligned_cols=182 Identities=21% Similarity=0.301 Sum_probs=104.3
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCccceE--EEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHV--ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hs--a~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.++|+.+++ |+.-.. + +..+.. .+..++.+|+..+ ...+++||..+....|+.-. +.
T Consensus 4 ~l~~~d~~tG~~~W~~~~~----~-~~~~~~~~~~~~~~~v~~~~~-------~~~l~~~d~~tG~~~W~~~~-----~~ 66 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLG----P-GIGGPVATAVPDGGRVYVASG-------DGNLYALDAKTGKVLWRFDL-----PG 66 (238)
T ss_dssp EEEEEETTTTEEEEEEECS----S-SCSSEEETEEEETTEEEEEET-------TSEEEEEETTTSEEEEEEEC-----SS
T ss_pred EEEEEECCCCCEEEEEECC----C-CCCCccceEEEeCCEEEEEcC-------CCEEEEEECCCCCEEEEeec-----cc
Confidence 57788887664 777321 1 122222 3346788888843 36899999988766687653 21
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEE-EccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR-KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~-~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
+........++ .+|+..+ -+.+++||..+....|+ .....+. ..........+.++.+|+...
T Consensus 67 -~~~~~~~~~~~-~v~v~~~------~~~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 130 (238)
T PF13360_consen 67 -PISGAPVVDGG-RVYVGTS------DGSLYALDAKTGKVLWSIYLTSSPP--AGVRSSSSPAVDGDRLYVGTS------ 130 (238)
T ss_dssp -CGGSGEEEETT-EEEEEET------TSEEEEEETTTSCEEEEEEE-SSCT--CSTB--SEEEEETTEEEEEET------
T ss_pred -cccceeeeccc-ccccccc------eeeeEecccCCcceeeeeccccccc--cccccccCceEecCEEEEEec------
Confidence 22222455565 7887762 12799999999988999 4544221 112333344455777776543
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCC-------cceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe--EE
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSP-------RYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WC 376 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~-------R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~--W~ 376 (975)
...++.++.. +|.-.|......++.. ......++.++.+|+..+.. .+..+|.++++ |+
T Consensus 131 -~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g----------~~~~~d~~tg~~~w~ 198 (238)
T PF13360_consen 131 -SGKLVALDPK-TGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG----------RVVAVDLATGEKLWS 198 (238)
T ss_dssp -CSEEEEEETT-TTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS----------SEEEEETTTTEEEEE
T ss_pred -cCcEEEEecC-CCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC----------eEEEEECCCCCEEEE
Confidence 2346666544 4555555544332211 11234445567888876531 25666999997 74
Q ss_pred E
Q 002047 377 D 377 (975)
Q Consensus 377 ~ 377 (975)
.
T Consensus 199 ~ 199 (238)
T PF13360_consen 199 K 199 (238)
T ss_dssp E
T ss_pred e
Confidence 3
|
... |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0089 Score=64.30 Aligned_cols=69 Identities=25% Similarity=0.312 Sum_probs=43.8
Q ss_pred CEEEEecCCCC------------HHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCC
Q 002047 699 PIKIFGDLHGQ------------FGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764 (975)
Q Consensus 699 ~i~vvGDiHG~------------~~~L~~ll~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~ 764 (975)
++.+++|||=. ...|.++++.+... ..+ -+|++||+++.|... ....+..+....+-.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d------~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPD------LVLVTGDLTDDGSPE--SYERLRELLAALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCC------EEEECccCCCCCCHH--HHHHHHHHHhhcCCC
Confidence 57899999944 34567777765432 222 588899999987532 222222222222456
Q ss_pred EEEEecccccc
Q 002047 765 VHLIRGNHEAA 775 (975)
Q Consensus 765 v~llrGNHE~~ 775 (975)
++.++||||..
T Consensus 73 ~~~v~GNHD~~ 83 (240)
T cd07402 73 VYLLPGNHDDR 83 (240)
T ss_pred EEEeCCCCCCH
Confidence 99999999974
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0082 Score=69.86 Aligned_cols=72 Identities=22% Similarity=0.362 Sum_probs=44.4
Q ss_pred CCEEEEecCC-CC-H------HH----HHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHH----HHHHHhhhcC
Q 002047 698 APIKIFGDLH-GQ-F------GD----LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI----TLLLALKVEY 761 (975)
Q Consensus 698 ~~i~vvGDiH-G~-~------~~----L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl----~ll~~lk~~~ 761 (975)
++++.++|+| |. + .+ |.++++.+.....+ -+|+.||++|++..+.+.. .++..|+..
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D------~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~- 73 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVD------AIIVAGDIFDTGSPPSYARELYNRFVVNLQQT- 73 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCC------EEEECCccccCCCCcHHHHHHHHHHHHHHHhc-
Confidence 4789999999 42 1 11 23344433222222 6889999999986554432 334445432
Q ss_pred CCCEEEEeccccccc
Q 002047 762 PNNVHLIRGNHEAAD 776 (975)
Q Consensus 762 P~~v~llrGNHE~~~ 776 (975)
+-.|+++.||||...
T Consensus 74 ~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 74 GCQLVVLAGNHDSVA 88 (407)
T ss_pred CCcEEEEcCCCCChh
Confidence 346999999999753
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.23 E-value=3.3 Score=47.67 Aligned_cols=181 Identities=18% Similarity=0.185 Sum_probs=95.9
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+++||..+++ |+.-... +...+.++.++.+|+.+. ...++.||..+....|+.-. +...
T Consensus 76 ~v~a~d~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~-----~~~~ 137 (377)
T TIGR03300 76 TVVALDAETGKRLWRVDLDE------RLSGGVGADGGLVFVGTE-------KGEVIALDAEDGKELWRAKL-----SSEV 137 (377)
T ss_pred eEEEEEccCCcEeeeecCCC------CcccceEEcCCEEEEEcC-------CCEEEEEECCCCcEeeeecc-----Ccee
Confidence 68999987664 8754322 112233444667776543 24799999987766787543 1111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
....++.++ .+|+..+ -..++.||+++....|+.-..... .........++.++.+|+ |..+ .
T Consensus 138 -~~~p~v~~~-~v~v~~~------~g~l~a~d~~tG~~~W~~~~~~~~--~~~~~~~sp~~~~~~v~~-~~~~------g 200 (377)
T TIGR03300 138 -LSPPLVANG-LVVVRTN------DGRLTALDAATGERLWTYSRVTPA--LTLRGSASPVIADGGVLV-GFAG------G 200 (377)
T ss_pred -ecCCEEECC-EEEEECC------CCeEEEEEcCCCceeeEEccCCCc--eeecCCCCCEEECCEEEE-ECCC------C
Confidence 122233444 6777543 235999999988778986533211 000111222344665544 3322 2
Q ss_pred ceEEeecCCCCeEEEEECCCCCC----CCc---ceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCC--eEEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSP----SPR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCD 377 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P----~~R---~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W~~ 377 (975)
.++.++.. +++-.|......+. ..| ...+.++.++.+|+... ...+++||++++ .|..
T Consensus 201 ~v~ald~~-tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~----------~g~l~a~d~~tG~~~W~~ 267 (377)
T TIGR03300 201 KLVALDLQ-TGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY----------QGRVAALDLRSGRVLWKR 267 (377)
T ss_pred EEEEEEcc-CCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc----------CCEEEEEECCCCcEEEee
Confidence 35666543 44444543221110 011 12334556788887542 234899999876 4644
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.013 Score=62.54 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=41.4
Q ss_pred CCEEEEecCC-CCHHH----------------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh---HHHHHHHHHh
Q 002047 698 APIKIFGDLH-GQFGD----------------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS---LETITLLLAL 757 (975)
Q Consensus 698 ~~i~vvGDiH-G~~~~----------------L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s---~evl~ll~~l 757 (975)
.++.||.|+| |--.. |.++.+.......+ .+|++||+++..... -++..+|..+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d------~vIi~GDl~h~~~~~~~~~~~~~~l~~~ 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIE------ALIINGDLKHEFKKGLEWRFIREFIEVT 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCC------EEEEcCccccccCChHHHHHHHHHHHhc
Confidence 6789999999 53222 22232322221122 799999999765542 2223333332
Q ss_pred hhcCCCCEEEEeccccccc
Q 002047 758 KVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 758 k~~~P~~v~llrGNHE~~~ 776 (975)
...+++++||||...
T Consensus 89 ----~~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 89 ----FRDLILIRGNHDALI 103 (225)
T ss_pred ----CCcEEEECCCCCCcc
Confidence 247999999999743
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.007 Score=60.89 Aligned_cols=44 Identities=23% Similarity=0.307 Sum_probs=27.8
Q ss_pred eEEEeccccCCCCCh--H---HHHHHHHHhhhcC-CCCEEEEeccccccc
Q 002047 733 DYLFLGDYVDRGQHS--L---ETITLLLALKVEY-PNNVHLIRGNHEAAD 776 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s--~---evl~ll~~lk~~~-P~~v~llrGNHE~~~ 776 (975)
.+||+||++|.+... . +.+..+.++.... ...++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 689999999987642 2 2222233322222 246999999999843
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.012 Score=64.83 Aligned_cols=71 Identities=13% Similarity=0.099 Sum_probs=45.6
Q ss_pred CCEEEEecCC-C-----------CHHHHHHHHHHhCCC-CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCC
Q 002047 698 APIKIFGDLH-G-----------QFGDLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNN 764 (975)
Q Consensus 698 ~~i~vvGDiH-G-----------~~~~L~~ll~~~g~~-~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~ 764 (975)
.+++.|+|+| . ....|.++++.+... +..+ -+|+.||++|.|. .+-+..+++.-...+..
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D-----~vvitGDl~~~~~--~~~~~~~~~~l~~l~~P 87 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFD-----LIVATGDLAQDHS--SEAYQHFAEGIAPLRKP 87 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCC-----EEEECCCCCCCCC--HHHHHHHHHHHhhcCCc
Confidence 5689999999 1 245677777765321 1111 5888999999874 23333333332334457
Q ss_pred EEEEecccccc
Q 002047 765 VHLIRGNHEAA 775 (975)
Q Consensus 765 v~llrGNHE~~ 775 (975)
++++.||||..
T Consensus 88 v~~v~GNHD~~ 98 (275)
T PRK11148 88 CVWLPGNHDFQ 98 (275)
T ss_pred EEEeCCCCCCh
Confidence 99999999973
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.02 Score=62.04 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=38.8
Q ss_pred EEEecCC--CCH---HHHHHHHHHhCCCCC-CCCccceeEEEeccccCCCCC------------h----HHHHHHHHHhh
Q 002047 701 KIFGDLH--GQF---GDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQH------------S----LETITLLLALK 758 (975)
Q Consensus 701 ~vvGDiH--G~~---~~L~~ll~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~------------s----~evl~ll~~lk 758 (975)
++|+|+| +.. ..+..+++.+.-... ... ...+|++||++|+... . .++..+|.+|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~--~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASR--VKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccC--ccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc
Confidence 6899999 432 222344443321111 000 0178899999997310 0 12333444443
Q ss_pred hcCCCCEEEEeccccccc
Q 002047 759 VEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 759 ~~~P~~v~llrGNHE~~~ 776 (975)
. .-.|+++.||||...
T Consensus 80 ~--~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 S--HIKIIIIPGNHDAVR 95 (243)
T ss_pred c--CCeEEEeCCCCCccc
Confidence 2 246999999999853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.038 Score=61.41 Aligned_cols=35 Identities=9% Similarity=0.113 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCCe
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH 917 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~ 917 (975)
....+.+.++++++++++-||.-..+-+....+++
T Consensus 181 ~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~ 215 (294)
T cd00839 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGT 215 (294)
T ss_pred HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCE
Confidence 34567778999999999999987654444333443
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.00086 Score=74.14 Aligned_cols=207 Identities=9% Similarity=-0.118 Sum_probs=139.3
Q ss_pred eeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccc
Q 002047 732 IDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLP 811 (975)
Q Consensus 732 ~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP 811 (975)
...|+|+++++++.+.++.+-+.+..+..|-.+....++||+. .++++.++.-.....+...+++..++.+..++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCccce
Confidence 3789999999999999999999999999988899999999944 45666666665566667889999999999999
Q ss_pred eEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC--CCCcccCCCCCceeeeCHH--HH
Q 002047 812 LAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS--VEGLRPNARGPGLVTFGPD--RV 887 (975)
Q Consensus 812 laa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~--~~~~~~n~rg~~~~~fg~~--~~ 887 (975)
..++.. +++|.||++.|...+...+.++.-...-+.. -..+. |-++.+.+. ...|. .++.. ..||-| ..
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~--gn~kg-~f~llD~~~~~k~tw~--~~~~~-p~~gyDfwyq 196 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAE--GNAKG-GFLLLDSDFNEKGTWE--KPGHS-PLFGYDFWYQ 196 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccc--cCCcC-CeEEecCccceecccc--cCCCc-cccccceeec
Confidence 997776 9999999999987665554432111100110 11111 333332110 11121 11111 223322 23
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCC--ceEEeEEec
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRD--LVVVPKLIH 952 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~--~~~~~~~~~ 952 (975)
-.++.....+.+.+.|...-.++..+.++ ++.|+..-|.-...+.+..+-++.+ +.+..+.+|
T Consensus 197 pr~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh 261 (476)
T KOG0918|consen 197 PRHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLH 261 (476)
T ss_pred cccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeecc
Confidence 34667777888888888655555556666 7889999998888889999988774 334445554
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.022 Score=59.52 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=29.5
Q ss_pred eEEEeccccCCCCC---hHHHHHHHHHhhhcCCCCEEEEecccc
Q 002047 733 DYLFLGDYVDRGQH---SLETITLLLALKVEYPNNVHLIRGNHE 773 (975)
Q Consensus 733 ~~vfLGDyVDRG~~---s~evl~ll~~lk~~~P~~v~llrGNHE 773 (975)
.+|++||+++.+.. +.+.+..++.......-.++++.||||
T Consensus 44 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 44 LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 68999999997765 355565555443333456899999999
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.72 E-value=1.1 Score=47.06 Aligned_cols=206 Identities=19% Similarity=0.226 Sum_probs=115.3
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEecccc--CCCCChHHHHHH-HHHhhhcCCCCEEEEecccc
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYV--DRGQHSLETITL-LLALKVEYPNNVHLIRGNHE 773 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyV--DRG~~s~evl~l-l~~lk~~~P~~v~llrGNHE 773 (975)
.+++..+.||||.+..|.++++.......+ -+|+.||+. ++|+.-.-..+. +..++. +--.|+.+.||.|
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D------~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD 75 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRAD------LLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCD 75 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCC------EEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCC
Confidence 468999999999999999999887644333 678899999 777643222211 344432 2357999999988
Q ss_pred ccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcc-c-----CHhhhhhccCCcccC
Q 002047 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSI-N-----HVEQIENLQRPITME 847 (975)
Q Consensus 774 ~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~-~-----~~~~i~~i~rp~~~~ 847 (975)
...+-.. .+..+. .+.. -...+++--||-=||+.+.- . +-++|....+-....
T Consensus 76 ~~~v~~~-------l~~~~~----~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~ 134 (226)
T COG2129 76 PPEVIDV-------LKNAGV----NVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKK 134 (226)
T ss_pred hHHHHHH-------HHhccc----cccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhc
Confidence 8644221 111211 1111 11234444455457776542 1 234454432221111
Q ss_pred CCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccc
Q 002047 848 AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNY 927 (975)
Q Consensus 848 ~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y 927 (975)
..+ ...=++---|.-+.... ++-| ...-|..+++++++..+-.+.|.||=-...|++.- |. ||+-.|.-
T Consensus 135 ~~~-~~~Il~~HaPP~gt~~d----~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i--G~--TivVNPG~ 203 (226)
T COG2129 135 ADN-PVNILLTHAPPYGTLLD----TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI--GN--TIVVNPGP 203 (226)
T ss_pred ccC-cceEEEecCCCCCcccc----CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccccccc--CC--eEEECCCC
Confidence 101 00011222222221111 2333 12348999999999999999999986666787653 22 55555544
Q ss_pred cCCCCCcEEEEEEcCC
Q 002047 928 CGTANNAGAILVLGRD 943 (975)
Q Consensus 928 ~~~~~n~ga~l~i~~~ 943 (975)
.+ .-.-|++.+++.
T Consensus 204 ~~--~g~yA~i~l~~~ 217 (226)
T COG2129 204 LG--EGRYALIELEKE 217 (226)
T ss_pred cc--CceEEEEEecCc
Confidence 22 345688888777
|
|
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.024 Score=61.00 Aligned_cols=44 Identities=9% Similarity=0.019 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceE---EecCCeEEEEecccccc
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFE---RFAQGHLITLFSATNYC 928 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~---~~~~~~~iTvfSa~~y~ 928 (975)
+...+.+.+++.++++++-||.-...-.. ...+| |+.+++|.=|
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~ 227 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADY 227 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchh
Confidence 45677888899999999999986533222 12344 4566666544
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.028 Score=65.06 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=53.1
Q ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 002047 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (975)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (975)
++|.+++|+|-- +..|.++++.+.....+ -+|+.||++|+..-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD------~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~ 77 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVD------MILLGGDLFHENKPSRKSLYQVLRSLRLYCLGD 77 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHhhccC
Confidence 578999999932 45677777777433333 5888999999999998888655544332
Q ss_pred -------------------------------CCCCEEEEeccccccc
Q 002047 761 -------------------------------YPNNVHLIRGNHEAAD 776 (975)
Q Consensus 761 -------------------------------~P~~v~llrGNHE~~~ 776 (975)
..--||+|-||||...
T Consensus 78 ~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 78 KPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred CccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1226999999999964
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=95.44 E-value=3.5 Score=47.49 Aligned_cols=177 Identities=20% Similarity=0.217 Sum_probs=95.8
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.+|+.+++ |+.-.... ....+...+.++.++.+| +|.. ...++.+|+.+....|+.-. ..+..
T Consensus 155 g~l~a~d~~tG~~~W~~~~~~~-~~~~~~~~sp~~~~~~v~-~~~~------~g~v~ald~~tG~~~W~~~~---~~~~g 223 (377)
T TIGR03300 155 GRLTALDAATGERLWTYSRVTP-ALTLRGSASPVIADGGVL-VGFA------GGKLVALDLQTGQPLWEQRV---ALPKG 223 (377)
T ss_pred CeEEEEEcCCCceeeEEccCCC-ceeecCCCCCEEECCEEE-EECC------CCEEEEEEccCCCEeeeecc---ccCCC
Confidence 468999998664 87643321 001122233455566554 4432 23688999987765786532 11111
Q ss_pred -----C---cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecC
Q 002047 228 -----R---YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (975)
Q Consensus 228 -----R---~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG 299 (975)
| ...+.++.++ .+|+... + ..+++||+.+....|..-... ....++.++++|+...
T Consensus 224 ~~~~~~~~~~~~~p~~~~~-~vy~~~~-~-----g~l~a~d~~tG~~~W~~~~~~---------~~~p~~~~~~vyv~~~ 287 (377)
T TIGR03300 224 RTELERLVDVDGDPVVDGG-QVYAVSY-Q-----GRVAALDLRSGRVLWKRDASS---------YQGPAVDDNRLYVTDA 287 (377)
T ss_pred CCchhhhhccCCccEEECC-EEEEEEc-C-----CEEEEEECCCCcEEEeeccCC---------ccCceEeCCEEEEECC
Confidence 1 1122333444 7777543 2 369999998887789764211 1223456888888642
Q ss_pred CCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 300 ~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
-..++.++.. +++-.|.... ...+...+.++.+++||+. .. ...++++|..+++
T Consensus 288 -------~G~l~~~d~~-tG~~~W~~~~---~~~~~~ssp~i~g~~l~~~-~~---------~G~l~~~d~~tG~ 341 (377)
T TIGR03300 288 -------DGVVVALDRR-SGSELWKNDE---LKYRQLTAPAVVGGYLVVG-DF---------EGYLHWLSREDGS 341 (377)
T ss_pred -------CCeEEEEECC-CCcEEEcccc---ccCCccccCEEECCEEEEE-eC---------CCEEEEEECCCCC
Confidence 1346666554 3333444321 0122233445578888774 22 2348899988763
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.36 Score=52.68 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=24.1
Q ss_pred eCHHHHHHHHHHcCCeEEEEeccccccceEEe
Q 002047 882 FGPDRVMEFCNNNDLQLIVRAHECVMDGFERF 913 (975)
Q Consensus 882 fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~ 913 (975)
-.++..++.|+..+-.+|.-||+- ++.+..
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~ 232 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVV 232 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeE
Confidence 478899999999999999999984 444443
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=95.33 E-value=1.4 Score=47.05 Aligned_cols=164 Identities=12% Similarity=0.117 Sum_probs=90.5
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCC---Cccc-EEEEe----CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGP---RYGH-VMALV----GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~---R~~h-~~~~~----~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
..++++|+.|.. |..++. .+.+ ...+ ...-+ +.=+++.+....+......+++|++.++ .|+.+.
T Consensus 14 ~~~~V~NP~T~~--~~~LP~---~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~~~~~~~~Vys~~~~--~Wr~~~ 86 (230)
T TIGR01640 14 KRLVVWNPSTGQ--SRWLPT---PKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGNRNQSEHQVYTLGSN--SWRTIE 86 (230)
T ss_pred CcEEEECCCCCC--EEecCC---CCCcccccccceEEEeecccCCcEEEEEEEeecCCCCCccEEEEEeCCC--Cccccc
Confidence 468999999974 988862 2221 1111 11111 1114555543322223457899999999 999987
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEE-EEECCCCCCCCcceeeEEEeCCEEEEEcC
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWE-WAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~-w~~~~g~~P~~R~~hs~v~~~~~L~V~GG 351 (975)
.... ....... .+..+|.||-+.-..... ....+..||..+. +|. +...+............+.++|+|.++..
T Consensus 87 ~~~~--~~~~~~~-~v~~~G~lyw~~~~~~~~-~~~~IvsFDl~~E-~f~~~i~~P~~~~~~~~~~~L~~~~G~L~~v~~ 161 (230)
T TIGR01640 87 CSPP--HHPLKSR-GVCINGVLYYLAYTLKTN-PDYFIVSFDVSSE-RFKEFIPLPCGNSDSVDYLSLINYKGKLAVLKQ 161 (230)
T ss_pred cCCC--CccccCC-eEEECCEEEEEEEECCCC-CcEEEEEEEcccc-eEeeeeecCccccccccceEEEEECCEEEEEEe
Confidence 4321 1111222 456688888776432211 1125777766654 555 34333221111223457777899888765
Q ss_pred cCCCCCccccCCcEEEEE-CCCCeEEEcccC
Q 002047 352 ALGGGRMVEDSSSVAVLD-TAAGVWCDTKSV 381 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD-~~t~~W~~v~~~ 381 (975)
..... .-+||+++ -...+|+++-.+
T Consensus 162 ~~~~~-----~~~IWvl~d~~~~~W~k~~~i 187 (230)
T TIGR01640 162 KKDTN-----NFDLWVLNDAGKQEWSKLFTV 187 (230)
T ss_pred cCCCC-----cEEEEEECCCCCCceeEEEEE
Confidence 32211 25799986 446679987665
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.05 Score=59.42 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=22.2
Q ss_pred HHHHHHHcCCeEEEEeccccccceEEe
Q 002047 887 VMEFCNNNDLQLIVRAHECVMDGFERF 913 (975)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~ 913 (975)
+.+.+++.++++++-||.=..++.+..
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceee
Confidence 777889999999999999887774544
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.052 Score=56.21 Aligned_cols=65 Identities=18% Similarity=0.104 Sum_probs=40.7
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-HHHHHHHHHhhhcC---------------------C
Q 002047 705 DLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-LETITLLLALKVEY---------------------P 762 (975)
Q Consensus 705 DiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-~evl~ll~~lk~~~---------------------P 762 (975)
|++|+=.=|.++++.+-.....+ .++||||++|.|--+ -|--..+..++..+ .
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd-----~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPD-----AVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGK 98 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCC-----EEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCC
Confidence 44566666777777654322221 688999999998533 23334444444433 1
Q ss_pred CCEEEEeccccc
Q 002047 763 NNVHLIRGNHEA 774 (975)
Q Consensus 763 ~~v~llrGNHE~ 774 (975)
-.+++|.||||.
T Consensus 99 i~~i~V~GNHDI 110 (193)
T cd08164 99 TPLINIAGNHDV 110 (193)
T ss_pred ceEEEECCcccC
Confidence 357899999998
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.073 Score=56.23 Aligned_cols=198 Identities=19% Similarity=0.221 Sum_probs=99.9
Q ss_pred EEecCCCC------HHHHHHHHHHhCCCCCCCCccceeEEEeccccC--CCCC-----hHHHHHHHHHhhhcCCCCEEEE
Q 002047 702 IFGDLHGQ------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD--RGQH-----SLETITLLLALKVEYPNNVHLI 768 (975)
Q Consensus 702 vvGDiHG~------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVD--RG~~-----s~evl~ll~~lk~~~P~~v~ll 768 (975)
+|+|+|=. -+-|+++|+.... ..+ .+++|||++| .|.. --+|...|..+. +-..+|+.+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad------~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i 73 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA-QAD------ALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYI 73 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc-cCc------EEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEe
Confidence 68898844 2334555555432 222 7899999998 3433 234444554443 334689999
Q ss_pred eccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceE---EEEcceEEEecCCccCcccC------------
Q 002047 769 RGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLA---ALIEKKIICMHGGIGRSINH------------ 833 (975)
Q Consensus 769 rGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPla---a~i~~~il~vHgGi~~~~~~------------ 833 (975)
.||||. .+...+ ....|. +.-+|-. ..-+++++++||-.--....
T Consensus 74 ~GN~Df-ll~~~f------~~~~g~-------------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~ 133 (237)
T COG2908 74 HGNHDF-LLGKRF------AQEAGG-------------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWA 133 (237)
T ss_pred cCchHH-HHHHHH------HhhcCc-------------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccH
Confidence 999995 332222 111221 2233333 23468999999966332100
Q ss_pred HhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCc--eeeeCHHHHHHHHHHcCCeEEEEeccccccceE
Q 002047 834 VEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG--LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 911 (975)
Q Consensus 834 ~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~--~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~ 911 (975)
..++.-+.+|+.... .+..=+|+.-. |........ .....+.++.+-+++++++.+|-||.-.+..-.
T Consensus 134 ~~~~lflnl~l~~R~---ri~~k~r~~s~-------~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~ 203 (237)
T COG2908 134 WLQLLFLNLPLRVRR---RIAYKIRSLSS-------WAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHN 203 (237)
T ss_pred HHHHHHHHhHHHHHH---HHHHHHHHhhH-------HhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhcc
Confidence 011111222222000 11111343331 111100000 122466778888999999999999987765544
Q ss_pred EecCCeEEEEeccccccCCCCCcEEEEEEcCCce
Q 002047 912 RFAQGHLITLFSATNYCGTANNAGAILVLGRDLV 945 (975)
Q Consensus 912 ~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~ 945 (975)
.. +...-+ +|.--..++++.++.+..
T Consensus 204 i~--~~~yi~------lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 204 IP--GITYIN------LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred CC--CceEEe------cCcchhcceEEEEecCcE
Confidence 32 211111 111224578888877653
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.043 Score=56.89 Aligned_cols=43 Identities=19% Similarity=0.364 Sum_probs=32.3
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCC----CCEEEEecccccc
Q 002047 733 DYLFLGDYVDRGQHS--LETITLLLALKVEYP----NNVHLIRGNHEAA 775 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P----~~v~llrGNHE~~ 775 (975)
-+|||||++|.|+.. .|.+..+..++..|. -.++.|.||||--
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 589999999999853 456676666664433 3688999999973
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=94.54 E-value=1.9 Score=47.57 Aligned_cols=113 Identities=14% Similarity=0.219 Sum_probs=72.5
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec--CCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--GPGP 225 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~--g~~P 225 (975)
-..+..||..+.+|..+... -..-. +++... +++||+.|-..-.+.....+-.||..+.+ |+.+... ..+|
T Consensus 15 C~~lC~yd~~~~qW~~~g~~---i~G~V-~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~--w~~~~~~~s~~ip 88 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNG---ISGTV-TDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT--WSSLGGGSSNSIP 88 (281)
T ss_pred CCEEEEEECCCCEeecCCCC---ceEEE-EEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe--eeecCCcccccCC
Confidence 45788899999999998653 12222 233333 56888888665444345678899999986 9988742 2456
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~ 273 (975)
.+....+....+...+|+.|... .-..-+.+||= . +|..+..
T Consensus 89 gpv~a~~~~~~d~~~~~~aG~~~--~g~~~l~~~dG--s--~W~~i~~ 130 (281)
T PF12768_consen 89 GPVTALTFISNDGSNFWVAGRSA--NGSTFLMKYDG--S--SWSSIGS 130 (281)
T ss_pred CcEEEEEeeccCCceEEEeceec--CCCceEEEEcC--C--ceEeccc
Confidence 66543333333444688887752 22345677755 5 8999977
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=94.46 E-value=8.2 Score=46.32 Aligned_cols=113 Identities=15% Similarity=0.159 Sum_probs=61.2
Q ss_pred cEEEEECCCCc--EEEecCCC-CCCCCc-cceEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNK--WSRITPFG-EPPTPR-AAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g-~~P~pR-~~hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
.++.+|..+.+ |+.-.... ....+. .....++.+ ++||+... ...++.+|..+....|+.-......+
T Consensus 72 ~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~-------~g~v~AlD~~TG~~~W~~~~~~~~~~ 144 (488)
T cd00216 72 ALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTF-------DGRLVALDAETGKQVWKFGNNDQVPP 144 (488)
T ss_pred cEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecC-------CCeEEEEECCCCCEeeeecCCCCcCc
Confidence 67889988654 87643321 001111 122234445 77776432 35799999988766788643110000
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCC----CCCCcEEEEECCCCCcEEEEcc
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGK----RPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~----~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.-....+.++.++ .+|+ |..++. .....+++||..+....|+.-.
T Consensus 145 ~~~i~ssP~v~~~-~v~v-g~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~ 193 (488)
T cd00216 145 GYTMTGAPTIVKK-LVII-GSSGAEFFACGVRGALRAYDVETGKLLWRFYT 193 (488)
T ss_pred ceEecCCCEEECC-EEEE-eccccccccCCCCcEEEEEECCCCceeeEeec
Confidence 0011233345554 5554 433221 2346799999999888897643
|
The alignment model contains an 8-bladed beta-propeller. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.072 Score=54.44 Aligned_cols=44 Identities=27% Similarity=0.314 Sum_probs=28.3
Q ss_pred eEEEeccccCCCCCh--HH---HHHHHHHhhhcC-----CCCEEEEeccccccc
Q 002047 733 DYLFLGDYVDRGQHS--LE---TITLLLALKVEY-----PNNVHLIRGNHEAAD 776 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s--~e---vl~ll~~lk~~~-----P~~v~llrGNHE~~~ 776 (975)
.+||+||++|.+... .+ .+..+..+.... ...+++|.||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 689999999988743 22 233332322111 346999999999853
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.13 Score=54.70 Aligned_cols=77 Identities=25% Similarity=0.295 Sum_probs=46.3
Q ss_pred CCeeee-cCCEEEEecCCCCHHHHH----------------HHHHHh--CCCCCCCCccceeEEEeccccCCCCC-----
Q 002047 691 PSVLQL-KAPIKIFGDLHGQFGDLM----------------RLFDEY--GSPSTAGDIAYIDYLFLGDYVDRGQH----- 746 (975)
Q Consensus 691 p~~l~l-~~~i~vvGDiHG~~~~L~----------------~ll~~~--g~~~~~~~~~~~~~vfLGDyVDRG~~----- 746 (975)
...+.+ ..++.||.|+|=-|+.-+ +.++.+ .+.+ + ++|+|||+-.-.+.
T Consensus 12 ~~~~~l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p-~------~lIilGD~KH~~~~~~~~e 84 (235)
T COG1407 12 LGVLYLPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGP-K------RLIILGDLKHEFGKSLRQE 84 (235)
T ss_pred cceeEeccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCC-C------EEEEcCccccccCcccccc
Confidence 334444 478999999995544332 222211 1111 1 79999999864332
Q ss_pred hHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 747 SLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 747 s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
..|+..++-.++.. .++++|||||...-
T Consensus 85 ~~~~~~f~~~~~~~---evi~i~GNHD~~i~ 112 (235)
T COG1407 85 KEEVREFLELLDER---EVIIIRGNHDNGIE 112 (235)
T ss_pred HHHHHHHHHHhccC---cEEEEeccCCCccc
Confidence 34555555444433 59999999998543
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=94.15 E-value=17 Score=43.65 Aligned_cols=202 Identities=18% Similarity=0.204 Sum_probs=98.6
Q ss_pred cCcEEEEECCCCc--EEEecCCCCCCCCc---------------cceEEEEe--CCEEEEEeccCC-----------CCC
Q 002047 149 TADVHCYDVLTNK--WSRITPFGEPPTPR---------------AAHVATAV--GTMVVIQGGIGP-----------AGL 198 (975)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR---------------~~hsa~~~--~~~iyv~GG~~~-----------~~~ 198 (975)
...++.||..+++ |+.-.....+-..+ ...+.++. ++.||+..|... ...
T Consensus 174 ~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~ 253 (488)
T cd00216 174 RGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNL 253 (488)
T ss_pred CcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCC
Confidence 4578999998764 87643221110111 11122222 356666644321 122
Q ss_pred ccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEE-----eCCc--EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc
Q 002047 199 SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL-----VGQR--YLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 199 ~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~-----~~~~--~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
..+.++.+|..+....|+.-....+...-+.....++ +++. .++++|..++ .++.||..+....|+.-
T Consensus 254 ~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G-----~l~ald~~tG~~~W~~~ 328 (488)
T cd00216 254 YTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNG-----FFYVLDRTTGKLISARP 328 (488)
T ss_pred ceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCc-----eEEEEECCCCcEeeEeE
Confidence 3457999999998778986431111110011111111 1221 2444454443 59999999998889764
Q ss_pred cCCCCCCCCcceeEEEEEeCCeEEEecCCCCC-----------CCCccceEEeecCCCCeEEEEECCCCCC------CCc
Q 002047 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDAS-----------SVPLASAYGLAKHRDGRWEWAIAPGVSP------SPR 334 (975)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~-----------~~~l~d~~~~~~~~~~~W~w~~~~g~~P------~~R 334 (975)
..... .....+.+|+-...... ......++.++. .+++-.|....+... .+.
T Consensus 329 ~~~~~----------~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~-~tG~~~W~~~~~~~~~~~~~g~~~ 397 (488)
T cd00216 329 EVEQP----------MAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDP-KTGKVVWEKREGTIRDSWNIGFPH 397 (488)
T ss_pred eeccc----------cccCCceEEEccccccccCcccccCCCCCCCceEEEEEeC-CCCcEeeEeeCCccccccccCCcc
Confidence 32100 11122566663321100 011234566644 355556665543110 122
Q ss_pred ceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCC--eEE
Q 002047 335 YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWC 376 (975)
Q Consensus 335 ~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W~ 376 (975)
.....++.++.||+ |..+ ..+++||.+|+ .|+
T Consensus 398 ~~~~~~~~g~~v~~-g~~d---------G~l~ald~~tG~~lW~ 431 (488)
T cd00216 398 WGGSLATAGNLVFA-GAAD---------GYFRAFDATTGKELWK 431 (488)
T ss_pred cCcceEecCCeEEE-ECCC---------CeEEEEECCCCceeeE
Confidence 23344556666665 3332 34899999988 465
|
The alignment model contains an 8-bladed beta-propeller. |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.11 Score=51.68 Aligned_cols=68 Identities=18% Similarity=0.343 Sum_probs=48.3
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccc
Q 002047 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (975)
Q Consensus 701 ~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (975)
.|+||+||+++.+.+-++.+.-. .+. +--+|++||+..-....-+ +.-++.=+++.|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k--~gp--Fd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKK--KGP--FDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcc--cCC--eeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 48999999999998877775321 221 2257889999986665534 44444445677888999999998
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.12 Score=57.10 Aligned_cols=71 Identities=24% Similarity=0.224 Sum_probs=46.6
Q ss_pred CCEEEEecCCCCHHH--HHHHHHHhCCCCCCCCccceeEEEeccccCC-CC-ChHHHHHHHHHhhhcCCCCEEEEecccc
Q 002047 698 APIKIFGDLHGQFGD--LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDR-GQ-HSLETITLLLALKVEYPNNVHLIRGNHE 773 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~--L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDR-G~-~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (975)
.+|+.+.|+|=.... ..+.+........+ -+++.|||+|+ .+ .--.++..|..|+.. -.+|.+.||||
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~D------livltGD~~~~~~~~~~~~~~~~L~~L~~~--~gv~av~GNHd 116 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPD------LIVLTGDYVDGDRPPGVAALALFLAKLKAP--LGVFAVLGNHD 116 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCC------EEEEEeeeecCCCCCCHHHHHHHHHhhhcc--CCEEEEecccc
Confidence 458999999977655 22233332222112 68899999995 44 445556666666544 57999999998
Q ss_pred ccc
Q 002047 774 AAD 776 (975)
Q Consensus 774 ~~~ 776 (975)
...
T Consensus 117 ~~~ 119 (284)
T COG1408 117 YGV 119 (284)
T ss_pred ccc
Confidence 743
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=93.81 E-value=14 Score=44.92 Aligned_cols=112 Identities=15% Similarity=0.102 Sum_probs=63.2
Q ss_pred cEEEEECCCC--cEEEecCCCC--CC---CCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC
Q 002047 151 DVHCYDVLTN--KWSRITPFGE--PP---TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 151 dv~~yD~~t~--~W~~l~~~g~--~P---~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
.++.+|..++ .|+.-..... .+ ......+.++.+++||+... ...++.+|..+....|+.-. ..
T Consensus 80 ~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~-------dg~l~ALDa~TGk~~W~~~~--~~ 150 (527)
T TIGR03075 80 RVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTL-------DARLVALDAKTGKVVWSKKN--GD 150 (527)
T ss_pred cEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcC-------CCEEEEEECCCCCEEeeccc--cc
Confidence 6888998875 4876432210 00 11122334566778876432 24699999998876787643 11
Q ss_pred CCC-CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 224 GPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 224 ~P~-~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
... .....+-++.++ .||+.........-..++.||.++....|+.-.
T Consensus 151 ~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 151 YKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred ccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 111 112233345565 666643222222345799999999987887543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.13 Score=55.71 Aligned_cols=66 Identities=33% Similarity=0.360 Sum_probs=42.2
Q ss_pred CEEEEecCCCCH---------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH-----HHHHHHHHhhhcCCCC
Q 002047 699 PIKIFGDLHGQF---------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL-----ETITLLLALKVEYPNN 764 (975)
Q Consensus 699 ~i~vvGDiHG~~---------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~-----evl~ll~~lk~~~P~~ 764 (975)
+|+.++|+||.+ ..|.++++...-...+ .-+|..||+++....+. .++..|-++ .-
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~-----~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~-----g~ 71 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENEN-----TLLLDAGDNFDGSPPSTATKGEANIELMNAL-----GY 71 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCC-----eEEEeCCccCCCccchhccCCcHHHHHHHhc-----CC
Confidence 578999999887 4556666665432111 14567999999887643 455555444 22
Q ss_pred EEEEeccccc
Q 002047 765 VHLIRGNHEA 774 (975)
Q Consensus 765 v~llrGNHE~ 774 (975)
.++..||||.
T Consensus 72 d~~~~GNHe~ 81 (252)
T cd00845 72 DAVTIGNHEF 81 (252)
T ss_pred CEEeeccccc
Confidence 3345699996
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=93.14 E-value=1.9 Score=49.20 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=73.4
Q ss_pred CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC------ccce
Q 002047 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP------LASA 310 (975)
Q Consensus 237 ~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~------l~d~ 310 (975)
.+.+|+.++.. ..+.+||+.+. .=. ..+..+.+...- .++..+++||+.......... .-.+
T Consensus 75 ~gskIv~~d~~------~~t~vyDt~t~--av~---~~P~l~~pk~~p-isv~VG~~LY~m~~~~~~~~~~~~~~~~FE~ 142 (342)
T PF07893_consen 75 HGSKIVAVDQS------GRTLVYDTDTR--AVA---TGPRLHSPKRCP-ISVSVGDKLYAMDRSPFPEPAGRPDFPCFEA 142 (342)
T ss_pred cCCeEEEEcCC------CCeEEEECCCC--eEe---ccCCCCCCCcce-EEEEeCCeEEEeeccCccccccCccceeEEE
Confidence 33478888654 34889999887 333 333333334444 444458889999886443211 1112
Q ss_pred EEee-----cCCCCeEEEEECCCCCCCCcc-------eeeEEEe-CCEEEEE-cCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 311 YGLA-----KHRDGRWEWAIAPGVSPSPRY-------QHAAVFV-NARLHVS-GGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 311 ~~~~-----~~~~~~W~w~~~~g~~P~~R~-------~hs~v~~-~~~L~V~-GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
..+. ......|.|...++ +|..+. -.+-+++ +..|||. -|.. ...|.||+++.+|+
T Consensus 143 l~~~~~~~~~~~~~~w~W~~LP~-PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~---------~GTysfDt~~~~W~ 212 (342)
T PF07893_consen 143 LVYRPPPDDPSPEESWSWRSLPP-PPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR---------WGTYSFDTESHEWR 212 (342)
T ss_pred eccccccccccCCCcceEEcCCC-CCccccCCcccceEEEEEEecCCeEEEEecCCc---------eEEEEEEcCCccee
Confidence 2222 13467899999876 344332 3345555 6688883 2211 23789999999999
Q ss_pred EcccC
Q 002047 377 DTKSV 381 (975)
Q Consensus 377 ~v~~~ 381 (975)
++..=
T Consensus 213 ~~GdW 217 (342)
T PF07893_consen 213 KHGDW 217 (342)
T ss_pred eccce
Confidence 98653
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=92.80 E-value=25 Score=41.44 Aligned_cols=193 Identities=12% Similarity=0.044 Sum_probs=86.3
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
...+|..|.....=+.+.... . ........-+ ++|++..-. .+ ...+|++|+.+.. ...+. ..+..
T Consensus 181 ~~~l~~~d~dg~~~~~lt~~~---~-~v~~p~wSpDG~~lay~s~~-~g---~~~i~~~dl~~g~--~~~l~---~~~g~ 247 (435)
T PRK05137 181 IKRLAIMDQDGANVRYLTDGS---S-LVLTPRFSPNRQEITYMSYA-NG---RPRVYLLDLETGQ--RELVG---NFPGM 247 (435)
T ss_pred ceEEEEECCCCCCcEEEecCC---C-CeEeeEECCCCCEEEEEEec-CC---CCEEEEEECCCCc--EEEee---cCCCc
Confidence 457788887654434443221 1 1111111223 345444321 11 2589999998763 55554 22221
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
-. .....-++++|++....++ ..++|.+|+.+. ...++..... .........+++-++|..... + .
T Consensus 248 ~~-~~~~SPDG~~la~~~~~~g---~~~Iy~~d~~~~--~~~~Lt~~~~-----~~~~~~~spDG~~i~f~s~~~-g--~ 313 (435)
T PRK05137 248 TF-APRFSPDGRKVVMSLSQGG---NTDIYTMDLRSG--TTTRLTDSPA-----IDTSPSYSPDGSQIVFESDRS-G--S 313 (435)
T ss_pred cc-CcEECCCCCEEEEEEecCC---CceEEEEECCCC--ceEEccCCCC-----ccCceeEcCCCCEEEEEECCC-C--C
Confidence 11 1111223435555443333 358999999888 6666654321 111223334554444433111 1 2
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
.++|.++.... ..+..... ..+.......-+++.+++...... ...++++|+.+..+..+.
T Consensus 314 ~~Iy~~d~~g~-~~~~lt~~----~~~~~~~~~SpdG~~ia~~~~~~~------~~~i~~~d~~~~~~~~lt 374 (435)
T PRK05137 314 PQLYVMNADGS-NPRRISFG----GGRYSTPVWSPRGDLIAFTKQGGG------QFSIGVMKPDGSGERILT 374 (435)
T ss_pred CeEEEEECCCC-CeEEeecC----CCcccCeEECCCCCEEEEEEcCCC------ceEEEEEECCCCceEecc
Confidence 35677764432 22222111 111111112224443333322111 235899999877665543
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=91.60 E-value=0.23 Score=51.98 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=43.5
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHH-------------------------HHH
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLE-------------------------TIT 752 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~e-------------------------vl~ 752 (975)
.+|..+.|.||+++.|.++.+.+.-...+ -+||+||++-....+-| .|.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D------~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPD------AVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-S------EEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCC------EEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 46899999999999999998877443333 69999999965543333 333
Q ss_pred HHHHhhhcCCCCEEEEeccccccch
Q 002047 753 LLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 753 ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
-++..--..+--+++|.||||....
T Consensus 80 ~ff~~L~~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 80 KFFRILGELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HHHHHHHCC-SEEEEE--TTS-SHH
T ss_pred HHHHHHHhcCCcEEEecCCCCchHH
Confidence 3333334455679999999999543
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.83 Score=44.98 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=29.6
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhh
Q 002047 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~ 780 (975)
.+.+|||+.-.-..--+..+++-+ .|.+++|++||||-..-...
T Consensus 48 ~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~~~~~ 91 (186)
T COG4186 48 VLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCHPMYR 91 (186)
T ss_pred eEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCccccc
Confidence 688899999654443443344433 36899999999998544333
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=90.71 E-value=2.1 Score=49.86 Aligned_cols=191 Identities=18% Similarity=0.203 Sum_probs=100.0
Q ss_pred CEEEEecCCC-CH----HHHHHHHHHhCCCCCCCCccceeEEE-eccccCC-C-----------CChHHHHHHHHHhhhc
Q 002047 699 PIKIFGDLHG-QF----GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDR-G-----------QHSLETITLLLALKVE 760 (975)
Q Consensus 699 ~i~vvGDiHG-~~----~~L~~ll~~~g~~~~~~~~~~~~~vf-LGDyVDR-G-----------~~s~evl~ll~~lk~~ 760 (975)
.+.+++|+|= .. +.+..+++.++-+.. --...+|+. -||.||. | .+..|-...+..+-..
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~--~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~ 304 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGD--LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ 304 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcc--cccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence 4789999995 22 334445555443321 112335655 7799994 2 1223334444444444
Q ss_pred CCC--CEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEE-cceEEEecCCccCcccCHhhh
Q 002047 761 YPN--NVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI-EKKIICMHGGIGRSINHVEQI 837 (975)
Q Consensus 761 ~P~--~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~~~~~~~~~i 837 (975)
-|. .|++..||||..-.....-+..+..+ .+|...+-.|-.=|...-+ +..+|..|| .+++||
T Consensus 305 vp~~I~v~i~PGnhDa~r~a~PQp~~~~~~k--------slf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDi 370 (481)
T COG1311 305 VPEHIKVFIMPGNHDAVRQALPQPHFPELIK--------SLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDI 370 (481)
T ss_pred CCCCceEEEecCCCCccccccCCCCcchhhc--------ccccccceEecCCCcEEEECCEEEEEecC------CCHHHH
Confidence 555 58999999999765443323333222 1232222222222444444 347788887 355555
Q ss_pred hhccCCcccCCCC-------------cceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEecc
Q 002047 838 ENLQRPITMEAGS-------------IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHE 904 (975)
Q Consensus 838 ~~i~rp~~~~~~~-------------~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~ 904 (975)
.+.-.....+.-. +...+-+|.-|...|- |.=.---++++.||+
T Consensus 371 i~~vP~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~-----------------------lVIeevPDv~~~Ghv 427 (481)
T COG1311 371 IKLVPGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDY-----------------------LVIEEVPDVFHTGHV 427 (481)
T ss_pred HhhCCCCCccchHHHHHHHHHhcccCCCCCCccccccCCcCc-----------------------eeeccCCcEEEEccc
Confidence 4432222211100 1223344544443210 111112356788999
Q ss_pred ccccceEEecCCeEEEEeccccccC
Q 002047 905 CVMDGFERFAQGHLITLFSATNYCG 929 (975)
Q Consensus 905 ~~~~G~~~~~~~~~iTvfSa~~y~~ 929 (975)
.. .|+....+.++|-.++-+.+..
T Consensus 428 h~-~g~~~y~gv~~vns~T~q~qTe 451 (481)
T COG1311 428 HK-FGTGVYEGVNLVNSGTWQEQTE 451 (481)
T ss_pred cc-cceeEEeccceEEeeeecchhc
Confidence 86 8888888888888888776543
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=90.57 E-value=0.37 Score=56.58 Aligned_cols=27 Identities=11% Similarity=0.272 Sum_probs=21.9
Q ss_pred HHHHHHHHHHcCCeEEEEeccccccce
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMDGF 910 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G~ 910 (975)
.+.++.+++++++++++-||.-..+-+
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~ 337 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERF 337 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceeccccc
Confidence 357888999999999999999764443
|
|
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=90.55 E-value=6.6 Score=44.82 Aligned_cols=122 Identities=18% Similarity=0.207 Sum_probs=70.2
Q ss_pred eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCC-----cEE
Q 002047 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLA-----DVW 257 (975)
Q Consensus 183 ~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~n-----dv~ 257 (975)
.+++|+..+.. ..+.+||..+.. -...+ .++.+...-.++.+++ +||++.......... .++
T Consensus 75 ~gskIv~~d~~-------~~t~vyDt~t~a--v~~~P---~l~~pk~~pisv~VG~-~LY~m~~~~~~~~~~~~~~~~FE 141 (342)
T PF07893_consen 75 HGSKIVAVDQS-------GRTLVYDTDTRA--VATGP---RLHSPKRCPISVSVGD-KLYAMDRSPFPEPAGRPDFPCFE 141 (342)
T ss_pred cCCeEEEEcCC-------CCeEEEECCCCe--EeccC---CCCCCCcceEEEEeCC-eEEEeeccCccccccCccceeEE
Confidence 48899998664 337799998863 33333 4455555556667787 699998764322111 444
Q ss_pred EE--E------CCCCCcEEEEccCCCCCCCCcce---eEEEEE-eCCeEEE-ecCCCCCCCCccceEEeecCCCCeEEEE
Q 002047 258 AL--D------TAAKPYEWRKLEPEGEGPPPCMY---ATASAR-SDGLLLL-CGGRDASSVPLASAYGLAKHRDGRWEWA 324 (975)
Q Consensus 258 ~y--D------l~s~~~~W~~v~~~~~~P~~r~~---~~a~~~-~~g~lyv-fGG~~~~~~~l~d~~~~~~~~~~~W~w~ 324 (975)
++ + .....|.|+.+++.+.....+.. -++-++ .+..|+| .-|.. .-+|.|+..+. +|++.
T Consensus 142 ~l~~~~~~~~~~~~~~w~W~~LP~PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~------~GTysfDt~~~-~W~~~ 214 (342)
T PF07893_consen 142 ALVYRPPPDDPSPEESWSWRSLPPPPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR------WGTYSFDTESH-EWRKH 214 (342)
T ss_pred EeccccccccccCCCcceEEcCCCCCccccCCcccceEEEEEEecCCeEEEEecCCc------eEEEEEEcCCc-ceeec
Confidence 44 3 23456899998764322111110 233333 3778888 43321 24889987765 45433
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.47 Score=52.35 Aligned_cols=64 Identities=25% Similarity=0.261 Sum_probs=37.9
Q ss_pred CEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEE--eccccCCCCCh-----------HH
Q 002047 699 PIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLF--LGDYVDRGQHS-----------LE 749 (975)
Q Consensus 699 ~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vf--LGDyVDRG~~s-----------~e 749 (975)
.|+.++|+||.+. .|..+++...-... ..|+ .||+++..+.+ ..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~-------~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~ 74 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENP-------NTLLIDNGDTIQGSPLADYYAKIEDGDPHP 74 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCC-------CeEEEeCCccCCccHHHHHhhhcccCCCCh
Confidence 4788999999973 35555655532111 2333 69999965422 22
Q ss_pred HHHHHHHhhhcCCCCEEEEeccccc
Q 002047 750 TITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 750 vl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
++..|-.+. --++..||||.
T Consensus 75 ~~~~ln~~g-----~d~~~lGNHe~ 94 (277)
T cd07410 75 MIAAMNALG-----YDAGTLGNHEF 94 (277)
T ss_pred HHHHHHhcC-----CCEEeecccCc
Confidence 455555442 22455699996
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=89.35 E-value=0.91 Score=52.78 Aligned_cols=73 Identities=22% Similarity=0.205 Sum_probs=48.2
Q ss_pred CCEEEEecCCCC-------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC--
Q 002047 698 APIKIFGDLHGQ-------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP-- 762 (975)
Q Consensus 698 ~~i~vvGDiHG~-------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P-- 762 (975)
+++..+.|+|=- +..|..+++.+.-...+ -+|+-||+.|+..-+.+++.++...-.+.-
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD------~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~ 74 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVD------FVLIAGDLFDTNNPSPRALKLFLEALRRLKDA 74 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCC------EEEEccccccCCCCCHHHHHHHHHHHHHhccC
Confidence 467888888833 23344444444322222 588899999999988888766555433322
Q ss_pred -CCEEEEeccccccc
Q 002047 763 -NNVHLIRGNHEAAD 776 (975)
Q Consensus 763 -~~v~llrGNHE~~~ 776 (975)
--||+|.||||...
T Consensus 75 ~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 75 GIPVVVIAGNHDSPS 89 (390)
T ss_pred CCcEEEecCCCCchh
Confidence 26999999999864
|
|
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=89.35 E-value=0.44 Score=56.81 Aligned_cols=71 Identities=20% Similarity=0.217 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHcCCe----EEEEeccccc--cceE-EecCCeEEEE---eccccccCCCCCcEEEEEEcCCceEEeEEec
Q 002047 883 GPDRVMEFCNNNDLQ----LIVRAHECVM--DGFE-RFAQGHLITL---FSATNYCGTANNAGAILVLGRDLVVVPKLIH 952 (975)
Q Consensus 883 g~~~~~~fl~~~~l~----~iiR~H~~~~--~G~~-~~~~~~~iTv---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 952 (975)
.++..++.|+..||+ .||-||.+|. +|=. ..++||++.| ||.. |.... -.|++-+|-...-+...-++
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~T-GIAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTT-GIAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hcccc-CccceEEEecCCcceeccCC
Confidence 567788899999999 9999999996 5543 4689999999 7765 44332 34455555555555555555
Q ss_pred CCC
Q 002047 953 PLP 955 (975)
Q Consensus 953 ~~~ 955 (975)
|-.
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 544
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=88.59 E-value=60 Score=38.52 Aligned_cols=192 Identities=15% Similarity=0.129 Sum_probs=90.3
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
...++..|.....-+.+.... . ........-+ ++|++.- .. .+ ...+|++|+.+.. -+.+. ..+..
T Consensus 197 ~~~l~i~d~dG~~~~~l~~~~---~-~~~~p~wSPDG~~La~~s-~~-~g--~~~L~~~dl~tg~--~~~lt---~~~g~ 263 (448)
T PRK04792 197 PYQLMIADYDGYNEQMLLRSP---E-PLMSPAWSPDGRKLAYVS-FE-NR--KAEIFVQDIYTQV--REKVT---SFPGI 263 (448)
T ss_pred ceEEEEEeCCCCCceEeecCC---C-cccCceECCCCCEEEEEE-ec-CC--CcEEEEEECCCCC--eEEec---CCCCC
Confidence 346777777665545443321 1 1111122223 3444432 11 11 2579999998753 44443 22211
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCe-EEEecCCCCCCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASSVP 306 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~-lyvfGG~~~~~~~ 306 (975)
- ......-++++|++....++ ..++|.+|+.+. +.+++..... .........+++ |++.....+
T Consensus 264 ~-~~~~wSPDG~~La~~~~~~g---~~~Iy~~dl~tg--~~~~lt~~~~-----~~~~p~wSpDG~~I~f~s~~~g---- 328 (448)
T PRK04792 264 N-GAPRFSPDGKKLALVLSKDG---QPEIYVVDIATK--ALTRITRHRA-----IDTEPSWHPDGKSLIFTSERGG---- 328 (448)
T ss_pred c-CCeeECCCCCEEEEEEeCCC---CeEEEEEECCCC--CeEECccCCC-----CccceEECCCCCEEEEEECCCC----
Confidence 1 11122223445666543333 258999999988 7777754321 111222333444 444432222
Q ss_pred ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 307 l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
..++|.++... +.++.....+. ........-+++.+++.+.... ...++++|+.+.....+.
T Consensus 329 ~~~Iy~~dl~~-g~~~~Lt~~g~----~~~~~~~SpDG~~l~~~~~~~g------~~~I~~~dl~~g~~~~lt 390 (448)
T PRK04792 329 KPQIYRVNLAS-GKVSRLTFEGE----QNLGGSITPDGRSMIMVNRTNG------KFNIARQDLETGAMQVLT 390 (448)
T ss_pred CceEEEEECCC-CCEEEEecCCC----CCcCeeECCCCCEEEEEEecCC------ceEEEEEECCCCCeEEcc
Confidence 24677776543 34443322211 1111122224444444333221 246999999999887654
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=88.46 E-value=0.82 Score=52.40 Aligned_cols=57 Identities=32% Similarity=0.350 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCCCCCccceeEEEeccccCCCCC--hHHHHHHHHHhhhcCCC----CEEEEeccccc
Q 002047 713 LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH--SLETITLLLALKVEYPN----NVHLIRGNHEA 774 (975)
Q Consensus 713 L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~--s~evl~ll~~lk~~~P~----~v~llrGNHE~ 774 (975)
|.+.|+..-+.-..+ -++|||||+|-|.+ .-|--.....+|..|+. .++.+.||||-
T Consensus 81 lrr~f~~~~~~lkPd-----vvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPD-----VVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCC-----EEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 445555544333221 57889999998875 35556677777777765 68999999997
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=88.43 E-value=55 Score=37.93 Aligned_cols=146 Identities=19% Similarity=0.194 Sum_probs=72.3
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
..++++|+.+.. ...+. ..+.... +.+.. +++.|++....++ ..++|.+|+.+. ..+.+......
T Consensus 214 ~~i~v~d~~~g~--~~~~~---~~~~~~~--~~~~spDg~~l~~~~~~~~---~~~i~~~d~~~~--~~~~l~~~~~~-- 279 (417)
T TIGR02800 214 PEIYVQDLATGQ--REKVA---SFPGMNG--APAFSPDGSKLAVSLSKDG---NPDIYVMDLDGK--QLTRLTNGPGI-- 279 (417)
T ss_pred cEEEEEECCCCC--EEEee---cCCCCcc--ceEECCCCCEEEEEECCCC---CccEEEEECCCC--CEEECCCCCCC--
Confidence 579999998763 44443 2222211 22222 3335665543332 257999999988 66766543221
Q ss_pred CcceeEEEEEeCC-eEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEE-eCCEEEEEcCcCCCCC
Q 002047 280 PCMYATASARSDG-LLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGR 357 (975)
Q Consensus 280 ~r~~~~a~~~~~g-~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~-~~~~L~V~GG~~~~~~ 357 (975)
... .....++ +|++.....+ ...+|.++.... .+......+ ......++ -+++.+++......
T Consensus 280 --~~~-~~~s~dg~~l~~~s~~~g----~~~iy~~d~~~~-~~~~l~~~~-----~~~~~~~~spdg~~i~~~~~~~~-- 344 (417)
T TIGR02800 280 --DTE-PSWSPDGKSIAFTSDRGG----SPQIYMMDADGG-EVRRLTFRG-----GYNASPSWSPDGDLIAFVHREGG-- 344 (417)
T ss_pred --CCC-EEECCCCCEEEEEECCCC----CceEEEEECCCC-CEEEeecCC-----CCccCeEECCCCCEEEEEEccCC--
Confidence 111 1222344 4544433322 135777665433 333222111 11122222 24555555544321
Q ss_pred ccccCCcEEEEECCCCeEEEcc
Q 002047 358 MVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 358 ~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
...++++|+.+..+..+.
T Consensus 345 ----~~~i~~~d~~~~~~~~l~ 362 (417)
T TIGR02800 345 ----GFNIAVMDLDGGGERVLT 362 (417)
T ss_pred ----ceEEEEEeCCCCCeEEcc
Confidence 346999999997776654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.26 E-value=33 Score=39.88 Aligned_cols=68 Identities=18% Similarity=0.271 Sum_probs=41.6
Q ss_pred EeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEEC
Q 002047 182 AVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 182 ~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
..++.+++.|+-. .-+-.+|+.+. .......|..-.-|++..+ -.+ ++|++-||+|+ .|-.||+
T Consensus 120 ~~d~t~l~s~sDd------~v~k~~d~s~a---~v~~~l~~htDYVR~g~~~-~~~-~hivvtGsYDg-----~vrl~Dt 183 (487)
T KOG0310|consen 120 PQDNTMLVSGSDD------KVVKYWDLSTA---YVQAELSGHTDYVRCGDIS-PAN-DHIVVTGSYDG-----KVRLWDT 183 (487)
T ss_pred ccCCeEEEecCCC------ceEEEEEcCCc---EEEEEecCCcceeEeeccc-cCC-CeEEEecCCCc-----eEEEEEe
Confidence 3577888888741 23444566654 3344445555555655443 233 38999999997 4666777
Q ss_pred CCCC
Q 002047 262 AAKP 265 (975)
Q Consensus 262 ~s~~ 265 (975)
.+.+
T Consensus 184 R~~~ 187 (487)
T KOG0310|consen 184 RSLT 187 (487)
T ss_pred ccCC
Confidence 7763
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=88.08 E-value=6.5 Score=43.48 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=62.2
Q ss_pred EEEeccCCCCC-ccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCC-CCCcEEEEECCCCC
Q 002047 188 VIQGGIGPAGL-SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR-PLADVWALDTAAKP 265 (975)
Q Consensus 188 yv~GG~~~~~~-~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~-~~ndv~~yDl~s~~ 265 (975)
||.|-+...+. ....+..||..+. +|..+- .--.. .=+.+...+++.||+.|-.+-.. ....+-.||..+.
T Consensus 2 ~VGG~F~~aGsL~C~~lC~yd~~~~--qW~~~g---~~i~G-~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~- 74 (281)
T PF12768_consen 2 YVGGSFTSAGSLPCPGLCLYDTDNS--QWSSPG---NGISG-TVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ- 74 (281)
T ss_pred EEeeecCCCCCcCCCEEEEEECCCC--EeecCC---CCceE-EEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC-
Confidence 44444443333 5678999999887 499875 11111 11233344555888888654433 4567889999999
Q ss_pred cEEEEccCCC--CCCCCcceeEEEEEeCCeEEEecCC
Q 002047 266 YEWRKLEPEG--EGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 266 ~~W~~v~~~~--~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
+|..+.... ..|.+-..-.........+++.|..
T Consensus 75 -~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~ 110 (281)
T PF12768_consen 75 -TWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRS 110 (281)
T ss_pred -eeeecCCcccccCCCcEEEEEeeccCCceEEEecee
Confidence 999887732 3343322222222344578887775
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=88.07 E-value=42 Score=36.17 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=47.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
+.++.||..+.+....-..+ ..++ ..+.. ++.+|+.++. ...+.+||+.+.. ....+. ..
T Consensus 53 ~~v~~~d~~~~~~~~~~~~~--~~~~---~~~~~~~g~~l~~~~~~------~~~l~~~d~~~~~-~~~~~~------~~ 114 (300)
T TIGR03866 53 DTIQVIDLATGEVIGTLPSG--PDPE---LFALHPNGKILYIANED------DNLVTVIDIETRK-VLAEIP------VG 114 (300)
T ss_pred CeEEEEECCCCcEEEeccCC--CCcc---EEEECCCCCEEEEEcCC------CCeEEEEECCCCe-EEeEee------CC
Confidence 36788999887765432221 1121 22222 3356666542 2468999998753 122221 11
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..-+.++...++.+++++..++ +.++.||..+.
T Consensus 115 ~~~~~~~~~~dg~~l~~~~~~~----~~~~~~d~~~~ 147 (300)
T TIGR03866 115 VEPEGMAVSPDGKIVVNTSETT----NMAHFIDTKTY 147 (300)
T ss_pred CCcceEEECCCCCEEEEEecCC----CeEEEEeCCCC
Confidence 1123444444445666654432 24666788765
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=87.22 E-value=44 Score=38.38 Aligned_cols=159 Identities=15% Similarity=0.225 Sum_probs=86.6
Q ss_pred EEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEE
Q 002047 181 TAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALD 260 (975)
Q Consensus 181 ~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yD 260 (975)
+..++++|+.-. ...++.+|+.+....|...... ....-.+-..+.+++||+ |..++ .+++||
T Consensus 65 ~~~dg~v~~~~~-------~G~i~A~d~~~g~~~W~~~~~~----~~~~~~~~~~~~~G~i~~-g~~~g-----~~y~ld 127 (370)
T COG1520 65 ADGDGTVYVGTR-------DGNIFALNPDTGLVKWSYPLLG----AVAQLSGPILGSDGKIYV-GSWDG-----KLYALD 127 (370)
T ss_pred EeeCCeEEEecC-------CCcEEEEeCCCCcEEecccCcC----cceeccCceEEeCCeEEE-ecccc-----eEEEEE
Confidence 555678888711 1279999999876568765421 001111111222336555 43333 799999
Q ss_pred CCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEE
Q 002047 261 TAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV 340 (975)
Q Consensus 261 l~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v 340 (975)
..+....|..-... . .....+.+..++.+|+.- .-..++.++.. +++-.|.......-..+...+.+
T Consensus 128 ~~~G~~~W~~~~~~-~----~~~~~~~v~~~~~v~~~s-------~~g~~~al~~~-tG~~~W~~~~~~~~~~~~~~~~~ 194 (370)
T COG1520 128 ASTGTLVWSRNVGG-S----PYYASPPVVGDGTVYVGT-------DDGHLYALNAD-TGTLKWTYETPAPLSLSIYGSPA 194 (370)
T ss_pred CCCCcEEEEEecCC-C----eEEecCcEEcCcEEEEec-------CCCeEEEEEcc-CCcEEEEEecCCccccccccCce
Confidence 98888899887655 1 244555666677777753 12345666544 34444443332211222222223
Q ss_pred EeCCEEEEEcCcCCCCCccccCCcEEEEECCCC--eEEE
Q 002047 341 FVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCD 377 (975)
Q Consensus 341 ~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W~~ 377 (975)
.-++.+|+- ... . ...++.+|++++ .|..
T Consensus 195 ~~~~~vy~~-~~~-~------~~~~~a~~~~~G~~~w~~ 225 (370)
T COG1520 195 IASGTVYVG-SDG-Y------DGILYALNAEDGTLKWSQ 225 (370)
T ss_pred eecceEEEe-cCC-C------cceEEEEEccCCcEeeee
Confidence 445566654 321 0 125899999877 5764
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=85.95 E-value=80 Score=37.19 Aligned_cols=150 Identities=17% Similarity=0.112 Sum_probs=71.7
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (975)
..+|++|+.+.. -+.+. ..+.. .......-++++|++....++ ..++|.+|+.+. +.+++.....
T Consensus 223 ~~i~i~dl~~G~--~~~l~---~~~~~-~~~~~~SPDG~~La~~~~~~g---~~~I~~~d~~tg--~~~~lt~~~~---- 287 (429)
T PRK03629 223 SALVIQTLANGA--VRQVA---SFPRH-NGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS---- 287 (429)
T ss_pred cEEEEEECCCCC--eEEcc---CCCCC-cCCeEECCCCCEEEEEEcCCC---CcEEEEEECCCC--CEEEccCCCC----
Confidence 579999987753 34443 22211 111122223445665543333 236999999988 7777654321
Q ss_pred cceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccc
Q 002047 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360 (975)
Q Consensus 281 r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~ 360 (975)
.........+++.++|...... ...+|.++.... ..+.....+ .........-+++.+++.+....
T Consensus 288 -~~~~~~wSPDG~~I~f~s~~~g---~~~Iy~~d~~~g-~~~~lt~~~----~~~~~~~~SpDG~~Ia~~~~~~g----- 353 (429)
T PRK03629 288 -NNTEPTWFPDSQNLAYTSDQAG---RPQVYKVNINGG-APQRITWEG----SQNQDADVSSDGKFMVMVSSNGG----- 353 (429)
T ss_pred -CcCceEECCCCCEEEEEeCCCC---CceEEEEECCCC-CeEEeecCC----CCccCEEECCCCCEEEEEEccCC-----
Confidence 1122233345554444332111 236676655433 222221111 11111122224444444333221
Q ss_pred cCCcEEEEECCCCeEEEccc
Q 002047 361 DSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 361 ~~~dv~~yD~~t~~W~~v~~ 380 (975)
...++++|++++.+..+..
T Consensus 354 -~~~I~~~dl~~g~~~~Lt~ 372 (429)
T PRK03629 354 -QQHIAKQDLATGGVQVLTD 372 (429)
T ss_pred -CceEEEEECCCCCeEEeCC
Confidence 2359999999999887653
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=84.49 E-value=1.4 Score=48.96 Aligned_cols=66 Identities=29% Similarity=0.364 Sum_probs=41.2
Q ss_pred CEEEEecCCCCHHH--------------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-h-----HHHHHHHHHhh
Q 002047 699 PIKIFGDLHGQFGD--------------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-S-----LETITLLLALK 758 (975)
Q Consensus 699 ~i~vvGDiHG~~~~--------------L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-s-----~evl~ll~~lk 758 (975)
.|+.+.|+||++.. |..+++....... ..-+|..||++...+. + ..++.+|-++.
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~-----~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g 76 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNP-----NSLFVSAGDLIGASPFESALLQDEPTIEALNAMG 76 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCC-----CeEEEeCCcccccccchhhcccCCcHHHHHHhhC
Confidence 47889999998653 5566666533211 1246679999986653 2 24566666653
Q ss_pred hcCCCCEEEEeccccc
Q 002047 759 VEYPNNVHLIRGNHEA 774 (975)
Q Consensus 759 ~~~P~~v~llrGNHE~ 774 (975)
. . .+..||||.
T Consensus 77 ~----D-a~t~GNHef 87 (288)
T cd07412 77 V----D-ASAVGNHEF 87 (288)
T ss_pred C----e-eeeeccccc
Confidence 2 2 355599996
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=84.40 E-value=30 Score=37.82 Aligned_cols=49 Identities=16% Similarity=0.287 Sum_probs=29.4
Q ss_pred eEEEeccccCCCCC------------------hHHHHHHHHHhhhcCCC--CEEEEeccccccchhhhc
Q 002047 733 DYLFLGDYVDRGQH------------------SLETITLLLALKVEYPN--NVHLIRGNHEAADINALF 781 (975)
Q Consensus 733 ~~vfLGDyVDRG~~------------------s~evl~ll~~lk~~~P~--~v~llrGNHE~~~~~~~~ 781 (975)
++|+.||.|+.-.. ..+-+..|-.+-..-+. .|.++.||||-.......
T Consensus 45 rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQ 113 (257)
T cd07387 45 RLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQ 113 (257)
T ss_pred EEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCC
Confidence 68889999995432 22223322222222222 588999999997765443
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=84.30 E-value=2 Score=47.25 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=20.3
Q ss_pred HHHHHHHHHHcCCeEEEEecccccc
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMD 908 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~ 908 (975)
...+.+++++++++++|-||.-...
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccce
Confidence 3567888999999999999986543
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=83.79 E-value=88 Score=35.88 Aligned_cols=193 Identities=17% Similarity=0.219 Sum_probs=99.8
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.++.+|+.+.. |+...... .....-....-+++||+....+ .+|+||..+.+..|..-... . .+
T Consensus 79 ~i~A~d~~~g~~~W~~~~~~~---~~~~~~~~~~~~G~i~~g~~~g-------~~y~ld~~~G~~~W~~~~~~---~-~~ 144 (370)
T COG1520 79 NIFALNPDTGLVKWSYPLLGA---VAQLSGPILGSDGKIYVGSWDG-------KLYALDASTGTLVWSRNVGG---S-PY 144 (370)
T ss_pred cEEEEeCCCCcEEecccCcCc---ceeccCceEEeCCeEEEecccc-------eEEEEECCCCcEEEEEecCC---C-eE
Confidence 78889998876 87654310 0011111122256766554432 79999997766679876522 1 44
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
..-..+..++ .+|+.- .-+.++++|..+....|+.-...+ .+ ........+.++.+|+-.-- . -.
T Consensus 145 ~~~~~v~~~~-~v~~~s------~~g~~~al~~~tG~~~W~~~~~~~-~~--~~~~~~~~~~~~~vy~~~~~----~-~~ 209 (370)
T COG1520 145 YASPPVVGDG-TVYVGT------DDGHLYALNADTGTLKWTYETPAP-LS--LSIYGSPAIASGTVYVGSDG----Y-DG 209 (370)
T ss_pred EecCcEEcCc-EEEEec------CCCeEEEEEccCCcEEEEEecCCc-cc--cccccCceeecceEEEecCC----C-cc
Confidence 4444433333 555542 235789999998888998554332 11 12222222667777774221 1 12
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcce--eeEEEeCCEEEEEcCc-CCCCCccccCCcEEEEECCCC--eEEEcc
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQ--HAAVFVNARLHVSGGA-LGGGRMVEDSSSVAVLDTAAG--VWCDTK 379 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~--hs~v~~~~~L~V~GG~-~~~~~~~~~~~dv~~yD~~t~--~W~~v~ 379 (975)
.++.++.. ++.-.|...... +..+.. -...+..+.+++-||. ... ....++++|..+. .|..-.
T Consensus 210 ~~~a~~~~-~G~~~w~~~~~~-~~~~~~~~~~~~~~~~~v~v~~~~~~~~-----~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 210 ILYALNAE-DGTLKWSQKVSQ-TIGRTAISTTPAVDGGPVYVDGGVYAGS-----YGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred eEEEEEcc-CCcEeeeeeeec-ccCcccccccccccCceEEECCcEEEEe-----cCCeEEEEEcCCCceEEEEec
Confidence 56777654 445556532211 111110 0123445555555552 111 1334788888766 576544
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=83.78 E-value=92 Score=36.07 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=72.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..++++|+.++....+... +......+....++.|++..... ...++|++|+.+.. ...+... ....
T Consensus 214 ~~i~v~d~~~g~~~~~~~~---~~~~~~~~~spDg~~l~~~~~~~----~~~~i~~~d~~~~~--~~~l~~~---~~~~- 280 (417)
T TIGR02800 214 PEIYVQDLATGQREKVASF---PGMNGAPAFSPDGSKLAVSLSKD----GNPDIYVMDLDGKQ--LTRLTNG---PGID- 280 (417)
T ss_pred cEEEEEECCCCCEEEeecC---CCCccceEECCCCCEEEEEECCC----CCccEEEEECCCCC--EEECCCC---CCCC-
Confidence 5799999998877766543 11111111111233566553321 12579999998753 5555321 1110
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
......-++++|++.....+ ...+|++|+.+. +++.+..... .........+++.+++...... ...
T Consensus 281 ~~~~~s~dg~~l~~~s~~~g---~~~iy~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~i~~~~~~~~---~~~ 347 (417)
T TIGR02800 281 TEPSWSPDGKSIAFTSDRGG---SPQIYMMDADGG--EVRRLTFRGG-----YNASPSWSPDGDLIAFVHREGG---GFN 347 (417)
T ss_pred CCEEECCCCCEEEEEECCCC---CceEEEEECCCC--CEEEeecCCC-----CccCeEECCCCCEEEEEEccCC---ceE
Confidence 01111123435555443322 247999999888 7777654332 2222333446666666554431 235
Q ss_pred eEEeecCC
Q 002047 310 AYGLAKHR 317 (975)
Q Consensus 310 ~~~~~~~~ 317 (975)
++.++...
T Consensus 348 i~~~d~~~ 355 (417)
T TIGR02800 348 IAVMDLDG 355 (417)
T ss_pred EEEEeCCC
Confidence 66665543
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.30 E-value=2 Score=46.85 Aligned_cols=65 Identities=23% Similarity=0.223 Sum_probs=38.9
Q ss_pred CEEEEecCCCCHH----------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-----HHHHHHHHHhhhcCCC
Q 002047 699 PIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETITLLLALKVEYPN 763 (975)
Q Consensus 699 ~i~vvGDiHG~~~----------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl~ll~~lk~~~P~ 763 (975)
+|+-+.|+||++. .|..+++...-.+ ..-+|..||+++..+.+ ..++..|-++. -
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~------~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~ 71 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLD------NDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----Y 71 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcC------CEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----C
Confidence 4778999999853 4556666653221 12466799999875533 23334443332 2
Q ss_pred CEEEEeccccc
Q 002047 764 NVHLIRGNHEA 774 (975)
Q Consensus 764 ~v~llrGNHE~ 774 (975)
.+ +..||||.
T Consensus 72 d~-~~~GNHef 81 (257)
T cd07408 72 DA-VTPGNHEF 81 (257)
T ss_pred cE-Eccccccc
Confidence 34 45699996
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=82.91 E-value=82 Score=34.86 Aligned_cols=151 Identities=20% Similarity=0.235 Sum_probs=74.9
Q ss_pred CCCCCCc-CceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEe
Q 002047 87 DGPGPRC-GHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (975)
Q Consensus 87 ~~P~pR~-ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l 165 (975)
-.|.||. |-|..++... +..+.|||....-..+... ..+..-+.+..-.+.++.||...++-+-|
T Consensus 28 vG~~P~SGGDTYNAV~~v----------Dd~IyFGGWVHAPa~y~gk----~~g~~~IdF~NKYSHVH~yd~e~~~VrLL 93 (339)
T PF09910_consen 28 VGPPPTSGGDTYNAVEWV----------DDFIYFGGWVHAPAVYEGK----GDGRATIDFRNKYSHVHEYDTENDSVRLL 93 (339)
T ss_pred ccCCCCCCCccceeeeee----------cceEEEeeeecCCceeeec----cCCceEEEEeeccceEEEEEcCCCeEEEE
Confidence 3456666 3444444322 3467799986532111100 01112244556678999999988764433
Q ss_pred cCCCCCCCCccceEEE---E---eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 166 TPFGEPPTPRAAHVAT---A---VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 166 ~~~g~~P~pR~~hsa~---~---~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
-.-+ .-.++.-.+=+ . ++++|++.=+-+ ...=-+|.+|..+.. -+.+. .-|.. -.+ .+.+.
T Consensus 94 Wkes-ih~~~~WaGEVSdIlYdP~~D~LLlAR~DG---h~nLGvy~ldr~~g~--~~~L~---~~ps~---KG~-~~~D~ 160 (339)
T PF09910_consen 94 WKES-IHDKTKWAGEVSDILYDPYEDRLLLARADG---HANLGVYSLDRRTGK--AEKLS---SNPSL---KGT-LVHDY 160 (339)
T ss_pred Eecc-cCCccccccchhheeeCCCcCEEEEEecCC---cceeeeEEEcccCCc--eeecc---CCCCc---Cce-Eeeee
Confidence 2111 01111111111 1 146777775432 222346777766653 44444 33433 222 22331
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEE
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEW 268 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W 268 (975)
.+|-+ .+...-+..+.+||+.++ +|
T Consensus 161 a~F~i--~~~~~g~~~i~~~Dli~~--~~ 185 (339)
T PF09910_consen 161 ACFGI--NNFHKGVSGIHCLDLISG--KW 185 (339)
T ss_pred EEEec--cccccCCceEEEEEccCC--eE
Confidence 23322 333445789999999999 99
|
|
| >PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium [] | Back alignment and domain information |
|---|
Probab=82.50 E-value=76 Score=34.53 Aligned_cols=159 Identities=15% Similarity=0.075 Sum_probs=81.9
Q ss_pred CCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCc-EEEEEecCCC---CCCCcccE---EEEeCCcEEEEE
Q 002047 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPR-WHRVVVQGPG---PGPRYGHV---MALVGQRYLMAI 244 (975)
Q Consensus 172 P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~-W~~v~~~g~~---P~~R~~h~---~~~~~~~~lyV~ 244 (975)
|.+-.+-+.+++++.+|.-=. ..+++.+||+.+.... |..++-.+.. |-...+++ .++-++ -|||+
T Consensus 66 p~~~~GtG~vVYngslYY~~~------~s~~IvkydL~t~~v~~~~~L~~A~~~n~~~y~~~~~t~iD~AvDE~-GLWvI 138 (250)
T PF02191_consen 66 PYPWQGTGHVVYNGSLYYNKY------NSRNIVKYDLTTRSVVARRELPGAGYNNRFPYYWSGYTDIDFAVDEN-GLWVI 138 (250)
T ss_pred eceeccCCeEEECCcEEEEec------CCceEEEEECcCCcEEEEEECCccccccccceecCCCceEEEEEcCC-CEEEE
Confidence 444556666777777766533 2578999999998633 5444422211 11111222 222244 58888
Q ss_pred cCCCCCCCCCcEEEEECCCCC--cEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEE
Q 002047 245 GGNDGKRPLADVWALDTAAKP--YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWE 322 (975)
Q Consensus 245 GG~~g~~~~ndv~~yDl~s~~--~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~ 322 (975)
-....+.-.--|-++|+.+.. -+|..--+ +.....+-+.-|.||++-..+... ..-.+.||..++ +
T Consensus 139 Yat~~~~g~ivvskld~~tL~v~~tw~T~~~-------k~~~~naFmvCGvLY~~~s~~~~~--~~I~yafDt~t~---~ 206 (250)
T PF02191_consen 139 YATEDNNGNIVVSKLDPETLSVEQTWNTSYP-------KRSAGNAFMVCGVLYATDSYDTRD--TEIFYAFDTYTG---K 206 (250)
T ss_pred EecCCCCCcEEEEeeCcccCceEEEEEeccC-------chhhcceeeEeeEEEEEEECCCCC--cEEEEEEECCCC---c
Confidence 665443322345667776542 25653211 233333455578899987765443 233455665544 2
Q ss_pred EEECCCCCCCCcceeeEEEe---CCEEEEE
Q 002047 323 WAIAPGVSPSPRYQHAAVFV---NARLHVS 349 (975)
Q Consensus 323 w~~~~g~~P~~R~~hs~v~~---~~~L~V~ 349 (975)
-..+.-..+.+-..++++-+ +.+||+.
T Consensus 207 ~~~~~i~f~~~~~~~~~l~YNP~dk~LY~w 236 (250)
T PF02191_consen 207 EEDVSIPFPNPYGNISMLSYNPRDKKLYAW 236 (250)
T ss_pred eeceeeeeccccCceEeeeECCCCCeEEEE
Confidence 22221111223334555555 3578887
|
Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding |
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=82.34 E-value=1.1e+02 Score=35.97 Aligned_cols=147 Identities=20% Similarity=0.246 Sum_probs=71.3
Q ss_pred cccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
...+|++|+.+.. ...+. ..+.. .......-++++|++....++ ..++|.+|+.+. ..+++.....
T Consensus 227 ~~~l~~~dl~~g~--~~~l~---~~~g~-~~~~~~SpDG~~l~~~~s~~g---~~~Iy~~d~~~g--~~~~lt~~~~--- 292 (433)
T PRK04922 227 RSAIYVQDLATGQ--RELVA---SFRGI-NGAPSFSPDGRRLALTLSRDG---NPEIYVMDLGSR--QLTRLTNHFG--- 292 (433)
T ss_pred CcEEEEEECCCCC--EEEec---cCCCC-ccCceECCCCCEEEEEEeCCC---CceEEEEECCCC--CeEECccCCC---
Confidence 3579999998764 44443 22221 111122223445655433333 258999999888 6666543321
Q ss_pred CcceeEEEEEeCCeEEEecC-CCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCC
Q 002047 280 PCMYATASARSDGLLLLCGG-RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGG 356 (975)
Q Consensus 280 ~r~~~~a~~~~~g~lyvfGG-~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~ 356 (975)
.........+++-++|.. ..+ ..++|.++... +.++.....+ .+....++. +..|++..+. +.
T Consensus 293 --~~~~~~~spDG~~l~f~sd~~g----~~~iy~~dl~~-g~~~~lt~~g-----~~~~~~~~SpDG~~Ia~~~~~-~~- 358 (433)
T PRK04922 293 --IDTEPTWAPDGKSIYFTSDRGG----RPQIYRVAASG-GSAERLTFQG-----NYNARASVSPDGKKIAMVHGS-GG- 358 (433)
T ss_pred --CccceEECCCCCEEEEEECCCC----CceEEEEECCC-CCeEEeecCC-----CCccCEEECCCCCEEEEEECC-CC-
Confidence 111223334555444432 222 13577765443 3333332221 111222222 3455554332 11
Q ss_pred CccccCCcEEEEECCCCeEEEcc
Q 002047 357 RMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 357 ~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
...++++|+.++.+..+.
T Consensus 359 -----~~~I~v~d~~~g~~~~Lt 376 (433)
T PRK04922 359 -----QYRIAVMDLSTGSVRTLT 376 (433)
T ss_pred -----ceeEEEEECCCCCeEECC
Confidence 236999999998887654
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=82.26 E-value=19 Score=40.60 Aligned_cols=104 Identities=19% Similarity=0.193 Sum_probs=63.4
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEecc---CCCCCccccEEEEEcCCCCCcEEEEEecCC
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGI---GPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~iyv~GG~---~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
.+..+|.||..+++-.-.- +.+-.++.+..-+ ..+|+..-+ ...+...+-+.+||..+..++++..-+.+
T Consensus 15 ~~~rv~viD~d~~k~lGmi-----~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k- 88 (342)
T PF06433_consen 15 MTSRVYVIDADSGKLLGMI-----DTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPK- 88 (342)
T ss_dssp SSEEEEEEETTTTEEEEEE-----EEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-
T ss_pred ccceEEEEECCCCcEEEEe-----ecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCc-
Confidence 4568999999988754443 3334455444333 377776543 23445677889999999876676554221
Q ss_pred CCCCCc------ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 224 GPGPRY------GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 224 ~P~~R~------~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+|. +.....-+++.+||+= -.+..+|-+.|+..+
T Consensus 89 ---~R~~~~~~~~~~~ls~dgk~~~V~N----~TPa~SVtVVDl~~~ 128 (342)
T PF06433_consen 89 ---PRAQVVPYKNMFALSADGKFLYVQN----FTPATSVTVVDLAAK 128 (342)
T ss_dssp ----B--BS--GGGEEE-TTSSEEEEEE----ESSSEEEEEEETTTT
T ss_pred ---chheecccccceEEccCCcEEEEEc----cCCCCeEEEEECCCC
Confidence 133 2233334666788862 345678999999988
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.57 E-value=21 Score=41.17 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=59.5
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
...-+|.||+.+.+-.++.++.-.+.+-...-.+...+.++++-|.. .-++++...+. +|..-- .++..
T Consensus 278 rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~------G~I~lLhakT~--eli~s~---KieG~ 346 (514)
T KOG2055|consen 278 RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN------GHIHLLHAKTK--ELITSF---KIEGV 346 (514)
T ss_pred cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccC------ceEEeehhhhh--hhhhee---eeccE
Confidence 34478999999999999977644443222333344455566666642 34666666554 353222 23333
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
....+.... ++.||+.||.. .||+||+.++
T Consensus 347 v~~~~fsSd-sk~l~~~~~~G------eV~v~nl~~~ 376 (514)
T KOG2055|consen 347 VSDFTFSSD-SKELLASGGTG------EVYVWNLRQN 376 (514)
T ss_pred EeeEEEecC-CcEEEEEcCCc------eEEEEecCCc
Confidence 344444433 34888888853 7999999887
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=81.42 E-value=1e+02 Score=34.99 Aligned_cols=176 Identities=12% Similarity=0.212 Sum_probs=80.6
Q ss_pred CCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC
Q 002047 159 TNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (975)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~ 237 (975)
-.+|+++.... ..+........++ +.+++.|.. ..+++-+-.-. .|+.+.. +..-.-+.+....
T Consensus 118 G~tW~~~~~~~--~~~~~~~~i~~~~~~~~~~~g~~-------G~i~~S~DgG~--tW~~~~~----~~~g~~~~i~~~~ 182 (334)
T PRK13684 118 GKNWTRIPLSE--KLPGSPYLITALGPGTAEMATNV-------GAIYRTTDGGK--NWEALVE----DAAGVVRNLRRSP 182 (334)
T ss_pred CCCCeEccCCc--CCCCCceEEEEECCCcceeeecc-------ceEEEECCCCC--CceeCcC----CCcceEEEEEECC
Confidence 35898885321 1222223344444 356666542 23433332223 4998751 2222334454555
Q ss_pred CcEEEEEcCCCCCCCCCcEEEE-ECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEee-c
Q 002047 238 QRYLMAIGGNDGKRPLADVWAL-DTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLA-K 315 (975)
Q Consensus 238 ~~~lyV~GG~~g~~~~ndv~~y-Dl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~-~ 315 (975)
++ .|+..|..| .++.. |.... +|+.+..... +.........++.+|++|... . ..+. .
T Consensus 183 ~g-~~v~~g~~G-----~i~~s~~~gg~--tW~~~~~~~~----~~l~~i~~~~~g~~~~vg~~G-~-------~~~~s~ 242 (334)
T PRK13684 183 DG-KYVAVSSRG-----NFYSTWEPGQT--AWTPHQRNSS----RRLQSMGFQPDGNLWMLARGG-Q-------IRFNDP 242 (334)
T ss_pred CC-eEEEEeCCc-----eEEEEcCCCCC--eEEEeeCCCc----ccceeeeEcCCCCEEEEecCC-E-------EEEccC
Confidence 54 444444333 23332 34445 7988754322 233444455678888886532 1 1221 1
Q ss_pred CCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 316 ~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.....|+-...+.. .....-+++++. ++.+|++|.. ..++.-.-.-.+|..+..
T Consensus 243 d~G~sW~~~~~~~~-~~~~~l~~v~~~~~~~~~~~G~~----------G~v~~S~d~G~tW~~~~~ 297 (334)
T PRK13684 243 DDLESWSKPIIPEI-TNGYGYLDLAYRTPGEIWAGGGN----------GTLLVSKDGGKTWEKDPV 297 (334)
T ss_pred CCCCccccccCCcc-ccccceeeEEEcCCCCEEEEcCC----------CeEEEeCCCCCCCeECCc
Confidence 22224543221101 011122334444 5678887753 124443444569988754
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.13 E-value=1.2e+02 Score=35.45 Aligned_cols=149 Identities=17% Similarity=0.173 Sum_probs=77.5
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
|...++++|. ..=+|.||+.+. +-.++.....++.+-...-.+...+ .++++-|..| -|+.+...+
T Consensus 269 G~~~i~~s~r------rky~ysyDle~a--k~~k~~~~~g~e~~~~e~FeVShd~-~fia~~G~~G-----~I~lLhakT 334 (514)
T KOG2055|consen 269 GHSVIFTSGR------RKYLYSYDLETA--KVTKLKPPYGVEEKSMERFEVSHDS-NFIAIAGNNG-----HIHLLHAKT 334 (514)
T ss_pred CceEEEeccc------ceEEEEeecccc--ccccccCCCCcccchhheeEecCCC-CeEEEcccCc-----eEEeehhhh
Confidence 3457888875 345889999885 4666653333332222222233344 4666666654 466666766
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC-eEEEEECCCCCCCCcceee-EEE
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG-RWEWAIAPGVSPSPRYQHA-AVF 341 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~-~W~w~~~~g~~P~~R~~hs-~v~ 341 (975)
+ .|..--.+ .......+....+.+||+.||.. .+|.++...+. .-+|....+. .+-+ |..
T Consensus 335 ~--eli~s~Ki----eG~v~~~~fsSdsk~l~~~~~~G-------eV~v~nl~~~~~~~rf~D~G~v-----~gts~~~S 396 (514)
T KOG2055|consen 335 K--ELITSFKI----EGVVSDFTFSSDSKELLASGGTG-------EVYVWNLRQNSCLHRFVDDGSV-----HGTSLCIS 396 (514)
T ss_pred h--hhhheeee----ccEEeeEEEecCCcEEEEEcCCc-------eEEEEecCCcceEEEEeecCcc-----ceeeeeec
Confidence 6 55321111 11233444445566888888743 46777655442 2234443322 2223 233
Q ss_pred eCCEEEEEcCcCCCCCccccCCcEEEEECCCC
Q 002047 342 VNARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (975)
Q Consensus 342 ~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~ 373 (975)
.++.++.+|-..+ -|-+||.++.
T Consensus 397 ~ng~ylA~GS~~G---------iVNIYd~~s~ 419 (514)
T KOG2055|consen 397 LNGSYLATGSDSG---------IVNIYDGNSC 419 (514)
T ss_pred CCCceEEeccCcc---------eEEEeccchh
Confidence 4666666664322 2567775443
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=80.90 E-value=3.2 Score=45.47 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=20.9
Q ss_pred EEEeccccCCCCCh-----HHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 734 YLFLGDYVDRGQHS-----LETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 734 ~vfLGDyVDRG~~s-----~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
+|..||+++..+.+ ..++.+|-++ + --.+. ||||.
T Consensus 55 ~l~~GD~~~gs~~~~~~~g~~~~~~l~~~----g-~da~~-GNHef 94 (264)
T cd07411 55 LLDGGDTWQGSGEALYTRGQAMVDALNAL----G-VDAMV-GHWEF 94 (264)
T ss_pred EEeCCCccCCChHHhhcCChhHHHHHHhh----C-CeEEe-ccccc
Confidence 45599999876543 2344444443 2 22334 99996
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 975 | ||||
| 1jk7_A | 323 | Crystal Structure Of The Tumor-Promoter Okadaic Aci | 1e-69 | ||
| 3v4y_A | 306 | Crystal Structure Of The First Nuclear Pp1 Holoenzy | 1e-68 | ||
| 3n5u_B | 300 | Crystal Structure Of An Rb C-Terminal Peptide Bound | 1e-68 | ||
| 3e7a_A | 299 | Crystal Structure Of Protein Phosphatase-1 Bound To | 1e-68 | ||
| 2o8a_A | 329 | Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng | 5e-68 | ||
| 1s70_A | 330 | Complex Between Protein Ser/thr Phosphatase-1 (delt | 1e-67 | ||
| 1u32_A | 293 | Crystal Structure Of A Protein Phosphatase-1: Calci | 2e-67 | ||
| 4g9j_A | 331 | Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P | 2e-67 | ||
| 1fjm_A | 330 | Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor | 2e-67 | ||
| 3egg_A | 329 | Crystal Structure Of A Complex Between Protein Phos | 3e-67 | ||
| 3c5w_C | 310 | Complex Between Pp2a-Specific Methylesterase Pme-1 | 2e-50 | ||
| 2ie4_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-50 | ||
| 2nyl_C | 293 | Crystal Structure Of Protein Phosphatase 2a (Pp2a) | 2e-50 | ||
| 2ie3_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 2e-50 | ||
| 3p71_C | 304 | Crystal Structure Of The Complex Of Lcmt-1 And Pp2a | 2e-50 | ||
| 3fga_C | 309 | Structural Basis Of Pp2a And Sgo Interaction Length | 5e-50 | ||
| 2iae_C | 309 | Crystal Structure Of A Protein Phosphatase 2a (Pp2a | 6e-50 | ||
| 1aui_A | 521 | Human Calcineurin Heterodimer Length = 521 | 9e-42 | ||
| 2p6b_A | 383 | Crystal Structure Of Human Calcineurin In Complex W | 2e-41 | ||
| 1m63_A | 372 | Crystal Structure Of Calcineurin-Cyclophilin-Cyclos | 3e-41 | ||
| 1mf8_A | 373 | Crystal Structure Of Human Calcineurin Complexed Wi | 4e-41 | ||
| 1tco_A | 375 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 4e-41 | ||
| 3ll8_A | 357 | Crystal Structure Of Calcineurin In Complex With Ak | 5e-41 | ||
| 2jog_A | 327 | Structure Of The Calcineurin-Nfat Complex Length = | 5e-41 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 1e-38 | ||
| 3h60_A | 315 | Catalytic Domain Of Human SerineTHREONINE PHOSPHATA | 2e-38 | ||
| 1s95_A | 333 | Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 | 2e-38 | ||
| 3icf_A | 335 | Structure Of Protein SerineTHREONINE PHOSPHATASE FR | 8e-37 |
| >pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 | Back alignment and structure |
|
| >pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 | Back alignment and structure |
|
| >pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 | Back alignment and structure |
|
| >pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 | Back alignment and structure |
|
| >pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 | Back alignment and structure |
|
| >pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 | Back alignment and structure |
|
| >pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 | Back alignment and structure |
|
| >pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 | Back alignment and structure |
|
| >pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 | Back alignment and structure |
|
| >pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 | Back alignment and structure |
|
| >pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 | Back alignment and structure |
|
| >pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 | Back alignment and structure |
|
| >pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 | Back alignment and structure |
|
| >pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 | Back alignment and structure |
|
| >pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 | Back alignment and structure |
|
| >pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 | Back alignment and structure |
|
| >pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 | Back alignment and structure |
|
| >pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 | Back alignment and structure |
|
| >pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 | Back alignment and structure |
|
| >pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 | Back alignment and structure |
|
| >pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 | Back alignment and structure |
|
| >pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 | Back alignment and structure |
|
| >pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
| >pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 | Back alignment and structure |
|
| >pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 | Back alignment and structure |
|
| >pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 975 | |||
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 1e-140 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 1e-139 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 1e-120 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 1e-110 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 1e-109 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 1e-108 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 1e-105 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 1e-101 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 8e-30 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 1e-28 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 6e-27 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 3e-10 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 1e-25 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 5e-08 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 6e-07 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-24 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 2e-19 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 3e-11 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 1e-23 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 2e-19 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 2e-15 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 7e-13 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 3e-23 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 2e-17 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 7e-16 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 2e-22 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 4e-15 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 3e-10 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 8e-06 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 8e-22 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 6e-16 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 7e-05 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 1e-19 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 5e-17 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 3e-13 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 3e-10 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 5e-05 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 4e-13 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 2e-12 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 5e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 3e-06 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 3e-06 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 3e-04 |
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 | Back alignment and structure |
|---|
Score = 422 bits (1086), Expect = e-140
Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 16/306 (5%)
Query: 650 KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQ 709
+I LL+ +G +P Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ
Sbjct: 11 SIIGRLLEVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 68
Query: 710 FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIR 769
+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+R
Sbjct: 69 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 770 GNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829
GNHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 123 GNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 178
Query: 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + L DLLWSDP ++ V+G N RG TFG + V +
Sbjct: 179 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVAK 234
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 950 LIHPLP 955
++ P
Sbjct: 295 ILKPAD 300
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-139
Identities = 138/305 (45%), Positives = 190/305 (62%), Gaps = 16/305 (5%)
Query: 650 KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQ 709
+I LL+ +G +P Q L NEI LC + IF S+P +L+L+AP+KI GD+HGQ
Sbjct: 10 SIIGRLLEVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 67
Query: 710 FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIR 769
+ DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA K++YP N L+R
Sbjct: 68 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
Query: 770 GNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGR 829
GNHE A IN ++GF EC R I W FN LP+AA++++KI C HGG+
Sbjct: 122 GNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 177
Query: 830 SINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVME 889
+ +EQI + RP + + L DLLWSDP ++ V+G N RG TFG + V +
Sbjct: 178 DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVS-FTFGAEVVAK 233
Query: 890 FCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPK 949
F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ + L+ +
Sbjct: 234 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 293
Query: 950 LIHPL 954
++ P
Sbjct: 294 ILKPA 298
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 | Back alignment and structure |
|---|
Score = 368 bits (948), Expect = e-120
Identities = 113/299 (37%), Positives = 163/299 (54%), Gaps = 19/299 (6%)
Query: 674 NEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 733
+++ LC+ A+ I + E +V +++ P+ + GD+HGQF DLM LF G +
Sbjct: 26 SQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT------N 79
Query: 734 YLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGE 793
YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGNHE+ I ++GF EC+ + G
Sbjct: 80 YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYG- 138
Query: 794 RDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-EAGSIV 852
W LF++LPL AL++ +I C+HGG+ SI+ ++ I L R + G
Sbjct: 139 --NANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG--P 194
Query: 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
+ DLLWSDP D G + RG G TFG D F + N L L+ RAH+ VM+G+
Sbjct: 195 MCDLLWSDP---DDRGGWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGYNW 250
Query: 913 FAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIED 971
+++T+FSA NYC N AI+ L L P P E R D
Sbjct: 251 CHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP---RRGEPHVTRRTPD 306
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 | Back alignment and structure |
|---|
Score = 343 bits (883), Expect = e-110
Identities = 102/331 (30%), Positives = 160/331 (48%), Gaps = 29/331 (8%)
Query: 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK------ 697
I ++ ++ I+ ++ + +L +A + A+ +F EPS+++L+
Sbjct: 9 IKNMSQEFISKMVNDL-----FLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPD 63
Query: 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL 757
I + GD HGQF D++ LF ++G YLF GD+VDRG S E L L
Sbjct: 64 VKISVCGDTHGQFYDVLNLFRKFGKVG-----PKHTYLFNGDFVDRGSWSCEVALLFYCL 118
Query: 758 KVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIE 817
K+ +PNN L RGNHE+ ++N ++GF EC + +R ++ + F LPLA LI
Sbjct: 119 KILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQR----IFNMFAQSFESLPLATLIN 174
Query: 818 KKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNAR 875
+ MHGG+ + +N+ R G M+LLW+DP G+ P+ R
Sbjct: 175 NDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG--AFMELLWADP---QEANGMGPSQR 229
Query: 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAG 935
G G FGPD F NN L+ I R+HE M G + +G L+T+FSA NYC + N G
Sbjct: 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLG 288
Query: 936 AILVLGRDLVVVPKLIHP-LPPAISSPETSP 965
++ + ++ + I + E
Sbjct: 289 GVIHVVPGHGILQAGRNDDQNLIIETFEAVE 319
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 | Back alignment and structure |
|---|
Score = 339 bits (872), Expect = e-109
Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 636 KLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQ 695
KL D +++I+ + K+++ + Q L + + + S ++++
Sbjct: 5 KLEDGKVTISFM-KELMQWY----------KDQKKLHRKCAYQILVQVKEVLSKLSTLVE 53
Query: 696 LK----APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETI 751
I + GD HGQF DL+ +F+ G PS Y+F GD+VDRG S+E I
Sbjct: 54 TTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YIFNGDFVDRGSFSVEVI 108
Query: 752 TLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLP 811
L K+ YP++ HL+RGNHE ++N ++GF E + + + + +F WLP
Sbjct: 109 LTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYELFSEVFEWLP 164
Query: 812 LAALIEKKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEG 869
LA I K++ MHGG+ ++ I ++R ++G + DLLWSDP G
Sbjct: 165 LAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG--PMCDLLWSDP---QPQNG 219
Query: 870 LRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCG 929
+ RG FGPD F N+L I+R+HE +G+E G +T+FSA NYC
Sbjct: 220 RSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCD 278
Query: 930 TANNAGAIL 938
N + +
Sbjct: 279 QMGNKASYI 287
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 | Back alignment and structure |
|---|
Score = 338 bits (870), Expect = e-108
Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 33 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 92
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 93 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 146
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 147 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 202
Query: 841 QRPITMEAGSIVLM-DLLWSDPTEN-----DSVEGLRPNARGPGLVTFGPDRVMEFCNNN 894
R E + M D+LWSDP E+ RG + V EF +N
Sbjct: 203 DRFK--EPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHN 259
Query: 895 DLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL 944
+L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 260 NLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 315
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 335 bits (862), Expect = e-105
Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 32/318 (10%)
Query: 627 TPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERI 686
T E + KL D +++I+ + K+++ + Q L + + +
Sbjct: 149 TIEDEYSGPKLEDGKVTISFM-KELMQWY----------KDQKKLHRKCAYQILVQVKEV 197
Query: 687 FSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVD 742
S ++++ I + GD HGQF DL+ +F+ G PS Y+F GD+VD
Sbjct: 198 LSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-----YIFNGDFVD 252
Query: 743 RGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHR 802
RG S+E I L K+ YP++ HL+RGNHE ++N ++GF E + + +
Sbjct: 253 RGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQ----MYEL 308
Query: 803 INRLFNWLPLAALIEKKIICMHGGIG-RSINHVEQIENLQRPITM-EAGSIVLMDLLWSD 860
+ +F WLPLA I K++ MHGG+ ++ I ++R ++G + DLLWSD
Sbjct: 309 FSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG--PMCDLLWSD 366
Query: 861 PTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLIT 920
P G + RG FGPD F N+L I+R+HE +G+E G +T
Sbjct: 367 P---QPQNGRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVT 422
Query: 921 LFSATNYCGTANNAGAIL 938
+FSA NYC N + +
Sbjct: 423 VFSAPNYCDQMGNKASYI 440
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 325 bits (835), Expect = e-101
Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 46 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 105
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 106 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 159
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 160 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 215
Query: 841 QRPITMEAGSIVLM-DLLWSDPTEN-----DSVEGLRPNARGPGLVTFGPDRVMEFCNNN 894
R E + M D+LWSDP E+ RG + V EF +N
Sbjct: 216 DRFK--EPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHN 272
Query: 895 DLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL 944
+L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 273 NLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 328
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 8e-30
Identities = 50/251 (19%), Positives = 82/251 (32%), Gaps = 13/251 (5%)
Query: 684 ERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID--YLFLGDYV 741
I P + D+HGQ+ L+ L + + G+ A+ + + GD
Sbjct: 57 SEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF 116
Query: 742 DRGQHSLETITLLLALKVEYP---NNVHLIRGNHEAADINALFGFRIEC---IERMGERD 795
DRG E + + L + VHL+ GNHE + + + + R
Sbjct: 117 DRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP 176
Query: 796 GIWAWHRINRLFNWLPLAALIEK--KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVL 853
+ + WL I K ++ MHGGI E + + A
Sbjct: 177 YNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANAL-YRANVDAS 235
Query: 854 MDLLWSDPTENDSVEGLRP-NARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER 912
L +D N G P RG TF + + ++ IV H +
Sbjct: 236 KKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGH-TSQERVLG 294
Query: 913 FAQGHLITLFS 923
+I + S
Sbjct: 295 LFHNKVIAVDS 305
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-28
Identities = 43/287 (14%), Positives = 81/287 (28%), Gaps = 36/287 (12%)
Query: 153 HCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQR 212
++ ++ ++ E P R G V GG P ++ ++ L + +
Sbjct: 367 SEINLTVDEDYQLLE-CECPINRKFGDVDVAGNDVFYMGGSNPYRVN--EILQLSIHYDK 423
Query: 213 PRWHRVVVQ-GPGPGPRYGHVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269
+ V P R H + + + L+ G + L+D W D + EW
Sbjct: 424 IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWS 481
Query: 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV 329
++ +A + DG +L+ GG L Y + + ++
Sbjct: 482 MIKS---LSHTRFRHSACSLPDGNVLILGGVTEGPAML--LYNVTE---EIFKDVTPKDE 533
Query: 330 SPSPRYQHAAVFVNARLH---VSGGALGGGRMVEDSSSVAVLDTAAGVWC-DTKSVVTSP 385
A + + + GG V D + + D + P
Sbjct: 534 FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP 593
Query: 386 RTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
RY + + I GG L D
Sbjct: 594 LFQRYGS----------------QIKYITPRKLLIVGGTSPSGLFDR 624
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-27
Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 54/285 (18%)
Query: 81 VIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGS 140
+ + P R HT T ++ +L+L GG A
Sbjct: 429 IEVSSSEVPVARMCHTFTTISRNN----------QLLLIGGRKAPHQ------------- 465
Query: 141 AGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS 199
+D +D+ T +WS I R H A ++ V+I GG+
Sbjct: 466 -------GLSDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLILGGVTEGP-- 513
Query: 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH---VMALVGQRYLMAIGGNDGKRPLAD- 255
+ + ++T++ + V + V ++ ++ GG + ++D
Sbjct: 514 --AMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569
Query: 256 --VWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGL 313
++ D ++ + + LL+ GG S + +
Sbjct: 570 AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSI 628
Query: 314 AKHRDGRWEWAIAPGVSPSP------RYQHAAVFV-NARLHVSGG 351
P + V +H+ GG
Sbjct: 629 ISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 3e-10
Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 31/195 (15%)
Query: 277 GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ 336
P + + GG + V + + ++ P R
Sbjct: 383 ECPINRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC 442
Query: 337 HAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADA 394
H + N +L + GG + + D + D W S++ S R+
Sbjct: 443 HTFTTISRNNQLLLIGGRKAPHQGLSD---NWIFDMKTREW----SMIKSLSHTRF---- 491
Query: 395 AGGDAAVELTRRCRHAAAAVGD-LIFIYGGLRGG--VLLDDL--LVAEDLAAAETTTAAS 449
RH+A ++ D + I GG+ G +LL ++ + +D+ + S
Sbjct: 492 -------------RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNS 538
Query: 450 HAAAAAAASNVQSRL 464
+A V +
Sbjct: 539 LVSAGLEFDPVSKQG 553
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 53/288 (18%), Positives = 83/288 (28%), Gaps = 49/288 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
V YD T +WS + R + ++ + + GG + + L
Sbjct: 28 SPIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGGYDGRSRLS-SVECL 83
Query: 207 DL-TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265
D + W+ V P R +G + GG DG R + D
Sbjct: 84 DYTADEDGVWYSVA---PMNVRRGLAGATTLGDM-IYVSGGFDGSRRHTSMERYDPNID- 138
Query: 266 YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEW 323
+W L + G++ GG D + L S Y G W
Sbjct: 139 -QWSMLGD----MQTAREGAGLVVASGVIYCLGGYDGLN-ILNSVEKY---DPHTGHWT- 188
Query: 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383
+ P + R +N ++V GG G + SSV + W S+
Sbjct: 189 NVTP--MATKRSGAGVALLNDHIYVVGGFDGTAHL----SSVEAYNIRTDSWTTVTSM-- 240
Query: 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
T RC A + ++ G G LL
Sbjct: 241 -------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHVLDLT 209
V YD T W+ +TP T R+ + + V+ G G A L S E ++
Sbjct: 177 VEKYDPHTGHWTNVTPM---ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVE---AYNIR 230
Query: 210 QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269
W V PR ++ R L AI G DG L+ + D W
Sbjct: 231 TDS--WTTV---TSMTTPRCYVGATVLRGR-LYAIAGYDGNSLLSSIECYDPIID--SWE 282
Query: 270 KLEP 273
+
Sbjct: 283 VVTS 286
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 6e-07
Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 32/152 (21%)
Query: 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVN 343
A ++ +LL+ GG + P+ EW+ P + R A+V ++
Sbjct: 7 TRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQ---EWSFLPSI-TRKRRYVASVSLH 62
Query: 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAA---GVWCDTKSVVTSPRTGRYSADAAGGDAA 400
R++V GG G R SSV LD A GVW +
Sbjct: 63 DRIYVIGGYDGRSR----LSSVECLDYTADEDGVWYSVAPM------------------- 99
Query: 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
RR A +GD+I++ GG G
Sbjct: 100 --NVRRGLAGATTLGDMIYVSGGFDGSRRHTS 129
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 50/290 (17%), Positives = 84/290 (28%), Gaps = 52/290 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL--- 203
+ + + Y+ W R+ PR+ VG ++ GG + D
Sbjct: 36 QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSAL 92
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263
+ +W P PR + ++ + A+GG+ G V +
Sbjct: 93 DCYNP--MTNQWSPCA---PMSVPRNRIGVGVIDGH-IYAVGGSHGCIHHNSVERYEPER 146
Query: 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRW 321
EW + P A + LL GG D ++ L SA Y W
Sbjct: 147 D--EWHLVAP----MLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECY---YPERNEW 196
Query: 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381
I + R ++ ++ +GG G ++ +SV D W +
Sbjct: 197 R-MITA--MNTIRSGAGVCVLHNCIYAAGGYDGQDQL----NSVERYDVETETWTFVAPM 249
Query: 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
RR I++ GG G LD
Sbjct: 250 ---------------------KHRRSALGITVHQGRIYVLGGYDGHTFLD 278
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 49/283 (17%), Positives = 77/283 (27%), Gaps = 64/283 (22%)
Query: 159 TNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV 218
++ + PR +H + GG LS L + + W R+
Sbjct: 3 SHHHHHHSS---GLVPRGSHAPKVGRLIYTA-GGYFRQSLS--YLEAYNPSNG--TWLRL 54
Query: 219 VVQGPGPGPRYGHVMALVGQRYLMAIGG----NDGKRPLADVWALDTAAKPYEWRKLEPE 274
PR G +VG L A+GG DG + + + +W P
Sbjct: 55 ---ADLQVPRSGLAGCVVGGL-LYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCAP- 107
Query: 275 GEGPPPCM----YATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWAIAPG 328
M DG + GG S Y + W +AP
Sbjct: 108 -------MSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERY---EPERDEWH-LVAP- 154
Query: 329 VSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTG 388
+ R +N L+ GG G R+ +S W ++
Sbjct: 155 -MLTRRIGVGVAVLNRLLYAVGGFDGTNRL----NSAECYYPERNEWRMITAM------- 202
Query: 389 RYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
T R + + I+ GG G L+
Sbjct: 203 --------------NTIRSGAGVCVLHNCIYAAGGYDGQDQLN 231
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 23/196 (11%)
Query: 146 AGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-GPAGLSAEDLH 204
V Y+ ++W + P T R + ++ GG G L++
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPM---LTRRIGVGVAVLNRLLYAVGGFDGTNRLNS--AE 187
Query: 205 VLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264
+ W + R G + ++ + A GG DG+ L V D +
Sbjct: 188 CYYPERN--EWRMI---TAMNTIRSGAGVCVLHNC-IYAAGGYDGQDQLNSVERYDVETE 241
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324
W + P + G + + GG D + L S D W+
Sbjct: 242 --TWTFVAPM---KHRRSALGITV-HQGRIYVLGGYDGHTF-LDSVECYDPDTD---TWS 291
Query: 325 IAPGVSPSPRYQHAAV 340
+ S R
Sbjct: 292 EVTRM-TSGRSGVGVA 306
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 59/288 (20%), Positives = 87/288 (30%), Gaps = 50/288 (17%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
A V CYD +W ++ P+ R + +V GG + +
Sbjct: 27 KAIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGGFNGSLRVR-TVDSY 82
Query: 207 DLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY 266
D + + W V R A++ L A+GG DG L+ V A + +
Sbjct: 83 DPVKDQ--WTSVA---NMRDRRSTLGAAVLNGL-LYAVGGFDGSTGLSSVEAYNIKSN-- 134
Query: 267 EWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASA--YGLAKHRDGRWEW 323
EW + P + GLL GG D +S L++ Y W
Sbjct: 135 EWFHVAP----MNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECY---NATTNEWT- 186
Query: 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383
IA + R +N L+ GG G SV V D W +
Sbjct: 187 YIAE--MSTRRSGAGVGVLNNLLYAVGGHDGPLVR----KSVEVYDPTTNAWRQVADM-- 238
Query: 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431
R AV L+++ GG G L
Sbjct: 239 -------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 51/266 (19%), Positives = 88/266 (33%), Gaps = 55/266 (20%)
Query: 173 TPR-AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH 231
+ R + ++V+ GG P + + D ++R WH+V P R
Sbjct: 3 SVRTRLRTPMNLPKLMVVVGGQAPKAIR--SVECYDFKEER--WHQV---AELPSRRCRA 55
Query: 232 VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM----YATAS 287
M + + A+GG +G + V + D +W + M +
Sbjct: 56 GMVYMAGL-VFAVGGFNGSLRVRTVDSYDPVKD--QWTSVAN--------MRDRRSTLGA 104
Query: 288 ARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345
A +GLL GG D S+ L+S Y + W +AP + R V
Sbjct: 105 AVLNGLLYAVGGFDGST-GLSSVEAY---NIKSNEWF-HVAP--MNTRRSSVGVGVVGGL 157
Query: 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTR 405
L+ GG R + S+V + W + + T R
Sbjct: 158 LYAVGGYDVASR--QCLSTVECYNATTNEW----TYIAEMST-----------------R 194
Query: 406 RCRHAAAAVGDLIFIYGGLRGGVLLD 431
R + +L++ GG G ++
Sbjct: 195 RSGAGVGVLNNLLYAVGGHDGPLVRK 220
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-15
Identities = 57/284 (20%), Positives = 89/284 (31%), Gaps = 69/284 (24%)
Query: 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHV 205
V YD + ++W+ + R+ A + G + + G G GL S E
Sbjct: 75 RVRTVDSYDPVKDQWTSVANM---RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVE---A 128
Query: 206 LDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG--KRPLADVWALDTAA 263
++ W V P R + +VG L A+GG D ++ L+ V +
Sbjct: 129 YNIKSNE--WFHV---APMNTRRSSVGVGVVG-GLLYAVGGYDVASRQCLSTVECYNATT 182
Query: 264 KPYEWRKLEPEGEGPPPCMYATASARS-------DGLLLLCGGRDASSVPLAS--AYGLA 314
EW + M ++ RS + LL GG D V S Y
Sbjct: 183 N--EWTYIAE--------M---STRRSGAGVGVLNNLLYAVGGHDGPLV-RKSVEVYDP- 227
Query: 315 KHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374
W +A R VN L+V GG G + +SV +
Sbjct: 228 --TTNAWR-QVAD--MNMCRRNAGVCAVNGLLYVVGGDDGSCNL----ASVEYYNPTTDK 278
Query: 375 WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLI 418
W +VV+S + T R + +
Sbjct: 279 W----TVVSSCMS----------------TGRSYAGVTVIDKRL 302
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 7e-13
Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 24/204 (11%)
Query: 146 AGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAED-LH 204
+ + V Y++ +N+W + P T R++ VG ++ GG A +
Sbjct: 120 STGLSSVEAYNIKSNEWFHVAPM---NTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176
Query: 205 VLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264
+ T W + R G + ++ L A+GG+DG V D
Sbjct: 177 CYNATTN--EWTYI---AEMSTRRSGAGVGVLNNL-LYAVGGHDGPLVRKSVEVYDPTTN 230
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS--AYGLAKHRDGRWE 322
WR++ A A +GLL + GG D S LAS Y +
Sbjct: 231 --AWRQVADM---NMCRRNAGVCA-VNGLLYVVGGDDGSCN-LASVEYYNPTTD-----K 278
Query: 323 WAIAPGVSPSPRYQHAAVFVNARL 346
W + + R ++ RL
Sbjct: 279 WTVVSSCMSTGRSYAGVTVIDKRL 302
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 57/330 (17%), Positives = 95/330 (28%), Gaps = 59/330 (17%)
Query: 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL---HVLD 207
YD N+ + P+ V + GG+ + ED + L
Sbjct: 14 GAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQ 71
Query: 208 LTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG---NDGKRPLADVWALDTAAK 264
W + P P PR + + +GG DG+R L V D +
Sbjct: 72 FDHLDSEWLGMP---PLPSPRCLFGLGEALNS-IYVVGGREIKDGERCLDSVMCYDRLSF 127
Query: 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWE 322
+W + +P P +Y L+ + GG+ + L Y + W+
Sbjct: 128 --KWGESDP----LPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD---PKKFEWK 178
Query: 323 WAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382
+AP + R A + R+ V+ G G SS V W ++
Sbjct: 179 -ELAP--MQTARSLFGATVHDGRIIVAAGVTDTGLT----SSAEVYSITDNKWAPFEAF- 230
Query: 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442
R + ++ ++ GG LV +L
Sbjct: 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDI 270
Query: 443 ET--------TTAASHAAAAAAASNVQSRL 464
A AA A+ + RL
Sbjct: 271 WRYNEEEKKWEGVLREIAYAAGATFLPVRL 300
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 2e-17
Identities = 45/277 (16%), Positives = 69/277 (24%), Gaps = 57/277 (20%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
P PRC + + + GG +G
Sbjct: 86 PSPRCLF---GLGEALN---------SIYVVGGREIKDGERC------------------ 115
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
V CYD L+ KW P P H + +V + GG G + V D
Sbjct: 116 LDSVMCYDRLSFKWGESDPL---PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW 268
+ W + P R + R ++ G + +W
Sbjct: 173 KKFE--WKEL---APMQTARSLFGATVHDGR-IIVAAGVTDTGLTSSAEVYSITDN--KW 224
Query: 269 RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH-------RDGRW 321
E P + + G L GG + + +W
Sbjct: 225 APFEAF---PQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280
Query: 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRM 358
E GV Y A F+ RL+V +
Sbjct: 281 E-----GVLREIAYAAGATFLPVRLNVLRLTKMAENL 312
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 7e-16
Identities = 50/348 (14%), Positives = 93/348 (26%), Gaps = 80/348 (22%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
P+ ++ ++ + GG E N
Sbjct: 33 QVPKNHV---SLVTKEN---------QVFVAGGLFYNEDNKEDP---------------M 65
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL----SAEDL 203
+A +D L ++W + P P+PR ++ V+ G G S
Sbjct: 66 SAYFLQFDHLDSEWLGMPPL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVM-- 120
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVWALDTA 262
D +W P P YGH + + IGG ++ L + D
Sbjct: 121 -CYDRLSF--KWGES---DPLPYVVYGHTVLSHM-DLVYVIGGKGSDRKCLNKMCVYDPK 173
Query: 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS--AYGLAKHRDGR 320
EW++L P A+ DG +++ G + +S Y + D +
Sbjct: 174 KF--EWKELAP---MQTARSLFGATVH-DGRIIVAAGVTDTG-LTSSAEVYSI---TDNK 223
Query: 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC-DTK 379
W P R + V + L+ GG L+ +W +
Sbjct: 224 WA-PFEA--FPQERSSLSLVSLVGTLYAIGG-FATLETESGELVPTELND---IWRYN-- 274
Query: 380 SVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427
++ A + + + +
Sbjct: 275 -----EEEKKWEGVLR--------EIAYAAGATFLPVRLNVLRLTKMA 309
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-22
Identities = 50/295 (16%), Positives = 83/295 (28%), Gaps = 62/295 (21%)
Query: 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLD 207
++ W+ I P R +V I GG + + +
Sbjct: 22 QPQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQLFPIK--RMDCYN 76
Query: 208 LTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVWALDTAAKPY 266
+ + W+ + P PR + + GG G L DT +
Sbjct: 77 VVKDS--WYSKL---GPPTPRDSLAACAAEGK-IYTSGGSEVGNSALYLFECYDTRTE-- 128
Query: 267 EWRKLEPEGEGPPPCM----YATASARSDGLLLLCGGRDASSV---PLASA--YGLAKHR 317
W M + ++GL+ +CGG ++V L S Y
Sbjct: 129 SWHTKPS--------MLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVY---DPA 177
Query: 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377
W + P R H VFV ++ GG G G + +V D W
Sbjct: 178 TETWT-ELCP--MIEARKNHGLVFVKDKIFAVGGQNGLGGL----DNVEYYDIKLNEWKM 230
Query: 378 TKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDD 432
+ + AAVG ++++ G +G L
Sbjct: 231 VSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVGRLGH 264
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 4e-15
Identities = 51/265 (19%), Positives = 82/265 (30%), Gaps = 56/265 (21%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG--IGPAGL-SAEDL 203
+ CY+V+ + W PPTPR + A A + GG +G + L E
Sbjct: 67 FPIKRMDCYNVVKDSWYSKLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFE-- 121
Query: 204 HVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG----KRPLADVWAL 259
D + WH R H M + GG+ G R L
Sbjct: 122 -CYDTRTE--SWHTK---PSMLTQRCSHGMVEAN-GLIYVCGGSLGNNVSGRVLNSCEVY 174
Query: 260 DTAAKPYEWRKLEPEGEGPPPCMYATASARS-------DGLLLLCGGRDASSVPLAS--A 310
D A + W +L P M AR + GG++ L +
Sbjct: 175 DPATE--TWTELCP--------M---IEARKNHGLVFVKDKIFAVGGQNGLGG-LDNVEY 220
Query: 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370
Y + + W+ ++P P V + ++V G G GR+ + +T
Sbjct: 221 YDI---KLNEWK-MVSP--MPWKGVTVKCAAVGSIVYVLAGFQGVGRL----GHILEYNT 270
Query: 371 AAGVWCDTKSVVTSPRTGRYSADAA 395
W + R ++
Sbjct: 271 ETDKW----VANSKVRAFPVTSCLI 291
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 34/194 (17%), Positives = 54/194 (27%), Gaps = 40/194 (20%)
Query: 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300
+ GG + W + P A D ++ + GG
Sbjct: 15 IALFGG----SQPQSCRYFNPKDY--SWTDIRC----PFEKRRDAACVFWDNVVYILGGS 64
Query: 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360
+ Y + W + P+PR AA +++ SGG+ G
Sbjct: 65 QLFPIKRMDCYNV---VKDSWY-SKLG--PPTPRDSLAACAAEGKIYTSGGSEVGN---S 115
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFI 420
DT W S+ LT+RC H LI++
Sbjct: 116 ALYLFECYDTRTESWHTKPSM---------------------LTQRCSHGMVEANGLIYV 154
Query: 421 YGGLRGGVLLDDLL 434
GG G + +L
Sbjct: 155 CGGSLGNNVSGRVL 168
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 8e-06
Identities = 25/142 (17%), Positives = 35/142 (24%), Gaps = 43/142 (30%)
Query: 290 SDGLLLLCGGRDASSV----PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345
D + L GG S P +D W P R A VF +
Sbjct: 11 HDYRIALFGGSQPQSCRYFNP----------KDYSWTDIRCP---FEKRRDAACVFWDNV 57
Query: 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTR 405
+++ GG+ + + W T
Sbjct: 58 VYILGGSQLF-----PIKRMDCYNVVKDSWYSKLGP---------------------PTP 91
Query: 406 RCRHAAAAVGDLIFIYGGLRGG 427
R AA A I+ GG G
Sbjct: 92 RDSLAACAAEGKIYTSGGSEVG 113
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 8e-22
Identities = 49/328 (14%), Positives = 90/328 (27%), Gaps = 58/328 (17%)
Query: 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDL---HVLDL 208
YD + N+ PR V + GG+ + + + L
Sbjct: 26 AVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQL 83
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPY 266
W + P P R + V + + + G D + L V D A
Sbjct: 84 DNVSSEWVGLP---PLPSARCLFGLGEVDDK-IYVVAGKDLQTEASLDSVLCYDPVAA-- 137
Query: 267 EWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA--YGLAKHRDGRWEWA 324
+W +++ P +Y +G++ GG+ Y + G W+
Sbjct: 138 KWSEVKN----LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIY---NPKKGDWK-D 189
Query: 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTS 384
+AP +PR ++ ++GG G +SV D W
Sbjct: 190 LAP--MKTPRSMFGVAIHKGKIVIAGGVTEDGLS----ASVEAFDLKTNKWEVMTEF--- 240
Query: 385 PRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAET 444
R + ++ ++ GG L ++
Sbjct: 241 ------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282
Query: 445 --------TTAASHAAAAAAASNVQSRL 464
A+ AS + +RL
Sbjct: 283 YEDDKKEWAGMLKEIRYASGASCLATRL 310
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 6e-16
Identities = 57/372 (15%), Positives = 105/372 (28%), Gaps = 94/372 (25%)
Query: 66 VVGPRCAPTYSVV-NAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA 124
+V A Y + N PR ++ ++ + GG
Sbjct: 20 LVNDTAAVAYDPMENECYLTALAEQIPRNHS---SIVTQQN---------QVYVVGGLYV 67
Query: 125 LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV- 183
E N + D ++++W + P P+ R V
Sbjct: 68 DEENKDQP---------------LQSYFFQLDNVSSEWVGLPPL---PSARCLFGLGEVD 109
Query: 184 GTMVVIQGGIGPAGL----SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239
+ V+ G S D +W V P YGH +
Sbjct: 110 DKIYVV-AGKDLQTEASLDSVL---CYDPVAA--KWSEV---KNLPIKVYGHNVISHN-G 159
Query: 240 YLMAIGG-NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-------D 291
+ +GG D K+ V+ + +W+ L P M + RS
Sbjct: 160 MIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAP--------M---KTPRSMFGVAIHK 206
Query: 292 GLLLLCGGRDASSVPLAS--AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349
G +++ GG + AS A+ L + +WE + P R + V + L+
Sbjct: 207 GKIVIAGGVTEDGL-SASVEAFDL---KTNKWE-VMTE--FPQERSSISLVSLAGSLYAI 259
Query: 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRH 409
GG ++ + V D +W ++ R
Sbjct: 260 GGFAMIQLESKEFAPTEVND----IWK------YEDDKKEWAGMLK--------EIRYAS 301
Query: 410 AAAAVGDLIFIY 421
A+ + + ++
Sbjct: 302 GASCLATRLNLF 313
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-GPAGLSAEDLHV 205
G +A V +D+ TNKW +T F P R++ ++ + GG S E
Sbjct: 219 GLSASVEAFDLKTNKWEVMTEF---PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPT 275
Query: 206 LDLTQQRPRWHRVVVQGPGPGPRYGHVMA-LVGQRYLMAIGG 246
+ + G RY + L + L +
Sbjct: 276 EVNDIWKYEDDKKEWAGMLKEIRYASGASCLATRLNLFKLSK 317
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 1e-19
Identities = 42/294 (14%), Positives = 69/294 (23%), Gaps = 70/294 (23%)
Query: 166 TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225
+ E P P + V I G + LD + +W + P
Sbjct: 1 SVLPETPVPFKSGTGAIDNDTVYIGLGSA-----GTAWYKLDTQAKDKKWTAL---AAFP 52
Query: 226 G-PRYGHVMALVGQRYLMAIGG-----NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279
G PR A + L GG + DV + W KL P
Sbjct: 53 GGPRDQATSAFIDGN-LYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLMSH---AP 106
Query: 280 PCMYATASARSDGLLLLCGGRDASS------------------VPLASAYGLAKHRDGRW 321
M + +G + GG + + + + Y K D +
Sbjct: 107 MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFF 166
Query: 322 ------------EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLD 369
+W+ A A V + + G G + AV +
Sbjct: 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG-----LRTDAVFE 221
Query: 370 TAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGG 423
+ + + A D + GG
Sbjct: 222 LDFTGNNLKWNKLAPVSSPD---------------GVAGGFAGISNDSLIFAGG 260
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 5e-17
Identities = 51/337 (15%), Positives = 84/337 (24%), Gaps = 67/337 (19%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGA 148
GPR T + L +FGG G L
Sbjct: 53 GGPRDQATSAFI------------DGNLYVFGGI----------------GKNSEGLTQV 84
Query: 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
DVH Y+ TN W ++ P A HV + GG + + + DL
Sbjct: 85 FNDVHKYNPKTNSWVKLMSH--APMGMAGHVTFVHNGKAYVTGG---VNQNIFNGYFEDL 139
Query: 209 TQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW 268
+ + + + + + D + + +W
Sbjct: 140 NEAGKDSTAI---DKINAHYFDK--------------KAEDYFFNKFLLSFDPSTQ--QW 180
Query: 269 RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG 328
GE P A L G + + + L + +AP
Sbjct: 181 SYA---GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237
Query: 329 VSPSPRYQHAAVFVNARLHVSG-GALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRT 387
SP A N L +G G R + + + +
Sbjct: 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTD---IHLWHN 294
Query: 388 GRYSADAAGGDAAVEL-TRRCRHAAAAVGDLIFIYGG 423
G++ EL R + + + I GG
Sbjct: 295 GKWDKSG-------ELSQGRAYGVSLPWNNSLLIIGG 324
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 3e-13
Identities = 39/259 (15%), Positives = 66/259 (25%), Gaps = 41/259 (15%)
Query: 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGAT------ALEGNSAASGTPSSAGSAG 142
P GH + + GG E + A ++
Sbjct: 106 PMGMAGH---VTFVHNG---------KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153
Query: 143 IRLAGATA-------DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGP 195
A + +D T +WS P A G + G
Sbjct: 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES--PWYGTAGAAVVNKGDKTWLINGEAK 211
Query: 196 AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA----IGGNDGKR 251
GL + + LD T +W+++ P G + + A G+
Sbjct: 212 PGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENY 270
Query: 252 PLADVWALDTAAKPYEWRKLEPE-------GEGPPPCMYATASARSDGLLLLCGGRDASS 304
+A + K Y GE Y S + LL+ GG A
Sbjct: 271 QNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLPWNNSLLIIGGETAGG 329
Query: 305 VPLASAYGLAKHRDGRWEW 323
+ + + +D +
Sbjct: 330 KAVTDSVLI-TVKDNKVTV 347
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 3e-10
Identities = 31/229 (13%), Positives = 53/229 (23%), Gaps = 48/229 (20%)
Query: 278 PPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337
P P T A + + + G ++ W PR Q
Sbjct: 7 PVPFKSGTG-AIDNDTVYIGLGSAGTAW---YKLDTQAKDKK---WTALAAFPGGPRDQA 59
Query: 338 AAVFVNARLHVSGG-ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAG 396
+ F++ L+V GG + + + V + W S G
Sbjct: 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG-------- 111
Query: 397 GDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAA 456
H ++ GG+ + EDL A
Sbjct: 112 ------------HVTFVHNGKAYVTGGVNQNIFNGYF---EDL----NEAGKDSTAIDKI 152
Query: 457 ASNVQSRLPGRYGFVDE-----------RTRQTIPEAAPDGS--VVLGN 492
++ + Y F P G+ V G+
Sbjct: 153 NAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGD 201
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 5e-05
Identities = 25/197 (12%), Positives = 43/197 (21%), Gaps = 46/197 (23%)
Query: 91 PRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATA 150
G + G + L G G+R T
Sbjct: 190 GTAGAAVVN------------KGDKTWLINGEA----------------KPGLR----TD 217
Query: 151 DVHCYDVLT--NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 208
V D KW+++ P P + +++ G
Sbjct: 218 AVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYA 277
Query: 209 TQQRPRWHRV----------VVQGPGPGPRYGHVMALVGQRYLMAIGG-NDGKRPLADVW 257
+ + + G R V L+ IGG G + + D
Sbjct: 278 HEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS-LLIIGGETAGGKAVTDSV 336
Query: 258 ALDTAAKPYEWRKLEPE 274
+ + LE
Sbjct: 337 LITVKDNKVTVQNLEHH 353
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 22/152 (14%)
Query: 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG 744
+ +++ ++ + + I GD+HG L L D +GD V++G
Sbjct: 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVS-FKQGSDTLV----AVGDLVNKG 60
Query: 745 QHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRIN 804
S + LL L + + GNH+A + + + E + RD + +
Sbjct: 61 PDSFGVVRLLKRL------GAYSVLGNHDAKLLKLVKKLGKK--ECLKGRDAKSSLAPLA 112
Query: 805 R-----LFNWL---PLAA-LIEKKIICMHGGI 827
+ + +L P + ++ H G+
Sbjct: 113 QSIPTDVETYLSQLPHIIRIPAHNVMVAHAGL 144
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 2e-12
Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 41/212 (19%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GDLHG + +LM D G + D+ +GD VDRG ++E + L+
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDN-KKDLLI----SVGDLVDRGAENVECLELITFP---- 67
Query: 762 PNNVHLIRGNHEAADINALFGFRIEC--------------IERMGERDGIWAWHRINRLF 807
+RGNHE I+ L ++ + L
Sbjct: 68 --WFRAVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKAD--ELP 123
Query: 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSV 867
+ L +KK + H +P+ + ++W+ ++S
Sbjct: 124 LIIEL-VSKDKKYVICHADY------PFDEYEFGKPVDHQ-------QVIWNRERISNSQ 169
Query: 868 EGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
G+ +G FG ++ + I
Sbjct: 170 NGIVKEIKGADTFIFGHTPAVKPLKFANQMYI 201
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 5e-12
Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 18/199 (9%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
+ GD+HG + +L+ L + + D + GD V RG SL+ + + +L
Sbjct: 5 LIGDVHGCYDELIALLHKVE-FTPGKDTLW----LTGDLVARGPGSLDVLRYVKSLG--- 56
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWL---PLAALIEK 818
++V L+ GNH+ + G + + + L NWL PL + E+
Sbjct: 57 -DSVRLVLGNHDLHLLAVFAGIS--RNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEE 113
Query: 819 KIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878
K + M ++ + R + S L + D P RG G
Sbjct: 114 KKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY--GDMPNNWSPELRGLG 171
Query: 879 LVTFGPDRV--MEFCNNND 895
+ F + M FC N
Sbjct: 172 RLRFITNAFTRMRFCFPNG 190
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 7e-10
Identities = 61/391 (15%), Positives = 105/391 (26%), Gaps = 128/391 (32%)
Query: 649 KKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSE--PSVLQLKAPI----KI 702
K +++ F DC ++ D + I S E ++ K + ++
Sbjct: 19 KDILSVFE------DAFVDNF--DCKDVQD---MPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 703 FGDLHGQ--------FGDLM---------RLFDEYGSPSTAGDIAYIDY---------LF 736
F L + +++ + E PS + YI+ +F
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM-YIEQRDRLYNDNQVF 126
Query: 737 LGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796
V R Q L+ LL L+ NV + G + G
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPA--KNV-------------LIDG--------VL---G 160
Query: 797 IWAWHRINRLFNWLPLAALIEKKIIC-MHGGI-----GRSINHVEQIENLQR-------- 842
W+ L + K+ C M I + +E LQ+
Sbjct: 161 SGKT--------WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 843 -----------PITMEAGSIVLMDLLWSDPTEN-----DSVEGLRP-NARGPG---LVTF 882
+ + + L LL S P EN +V+ + NA L+T
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272
Query: 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR 942
+V +F L H + + +L Y
Sbjct: 273 RFKQVTDF-----LSAATTTHISLDHHSMTLTPDEVKSLLL--KYLDCRPQ--------- 316
Query: 943 DLVVVPKLIHPLPPAISSPETSPERHIEDTW 973
DL +P +I + D W
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 4e-08
Identities = 88/604 (14%), Positives = 154/604 (25%), Gaps = 231/604 (38%)
Query: 460 VQSRLPGRYGFVDERTRQTIPEAAPDGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRL 519
V+ L Y F+ + P + MY I + RL
Sbjct: 83 VEEVLRINYKFLMSPIKT--------------EQRQPSMMTRMY--IEQRD-------RL 119
Query: 520 TKGVESLVQASAAEAEAISATLAAVKARQVNGEVELPDRDRGAEATPSGKQMIKPDSAGS 579
+ + + + + A+ + V + D G SGK
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-DGVLG-----SGKT--------- 164
Query: 580 NSIAPAGVRLHHRAVVVAAETGGALGGMVRQLSI-DQFENEGRRVSYG---TPESATAAR 635
VA + + + + + ++ +PE+
Sbjct: 165 ---------------WVALDV-------CLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 636 KLLDRQMSIN-------SVPKKVIAHLLKPRGWKPPVRRQFF----------LDCNEIAD 678
+ L Q+ N S K+ H ++ +RR L +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKSKPYENCLLVLL-----N 252
Query: 679 LCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYL--- 735
+ ++ + F +L + L+ T D+L
Sbjct: 253 VQNA--KA-------------WNAF-NLSCKI--LL----------TTRFKQVTDFLSAA 284
Query: 736 ----FLGDYVDRGQHSLETITLLL-ALKVEY---PNNVHLIRGNHEAADIN----ALFGF 783
D+ E +LLL L P E N ++
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP---------REVLTTNPRRLSIIA- 334
Query: 784 RIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQR- 842
E + RDG+ W + L +IE S+N +E E +
Sbjct: 335 -----ESI--RDGLATWDNWKHVNCD-KLTTIIES-----------SLNVLEPAEYRKMF 375
Query: 843 ----------PITMEAGSIVLMDLLWSDPTENDS---VEGLRPN---ARGPGLVTFG-PD 885
I +L L+W D ++D V L + P T P
Sbjct: 376 DRLSVFPPSAHIPTI----LLS-LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
Query: 886 RVMEFC--NNNDLQL---------IVRAHEC------VMDG--FERFA-------QGHLI 919
+E N+ L I + + +D + +
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490
Query: 920 TLFSAT-----------NYCGTANNA-GAILVLGRDLVVVPKLIHPLPPAISSPETSPER 967
TLF + TA NA G+IL + L I + P+ ER
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD-----NDPK--YER 543
Query: 968 HIED 971
+
Sbjct: 544 LVNA 547
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} Length = 246 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 21/145 (14%)
Query: 702 IFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEY 761
I D+H L + + G D LGD V G E + L+ L
Sbjct: 8 IISDVHANLVALEAVLSDAGRVD--------DIWSLGDIVGYGPRPRECVELVRVL---- 55
Query: 762 PNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINR----LFNWLPLAALIE 817
+ GNH+ A + ++ + W ++ LP +I+
Sbjct: 56 -APNISVIGNHDWA---CIGRLSLDEFNPVARFASYWTTMQLQAEHLQYLESLPN-RMID 110
Query: 818 KKIICMHGGIGRSINHVEQIENLQR 842
+HG I +
Sbjct: 111 GDWTVVHGSPRHPIWEYIYNARIAA 135
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Length = 252 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 4/104 (3%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
+ + ++ G L G Y LG+ V + E I ++ L
Sbjct: 4 VAVLANIAGNLPALTAALSRIEEMREEGYEIE-KYYILGNIVGLFPYPKEVIEVIKDLTK 62
Query: 760 EYPNNVHLIRGNHEAADINALF-GFRIECIERMGERDGIWAWHR 802
+ NV +IRG ++ + I+++ + +
Sbjct: 63 K--ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALK 104
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Length = 270 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 21/144 (14%), Positives = 39/144 (27%), Gaps = 20/144 (13%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + D+HG L + + A + +Y LGD + G + LL L
Sbjct: 14 IALLSDIHGNTTALEAVLAD------ARQLGVDEYWLLGDILMPGTGRRRILDLLDQL-- 65
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIEC--IERMGERDGIWAWHRI---NRLFNWLPLAA 814
+ GN E + + + +R R + I
Sbjct: 66 ---PITARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQ 122
Query: 815 LIE----KKIICMHGGIGRSINHV 834
+ + H ++
Sbjct: 123 IHRQFGDLTVGISHHLPDKNWGRE 146
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 975 | |||
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 100.0 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 100.0 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 100.0 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 100.0 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 100.0 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 100.0 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 100.0 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 100.0 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 99.97 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 99.95 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.95 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 99.95 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.89 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 99.88 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.76 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.45 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.39 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.37 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.69 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.66 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 98.62 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.41 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.39 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.37 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 98.23 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.22 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 97.94 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 97.94 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 97.37 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 97.3 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.25 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 97.08 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 96.99 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 96.99 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 96.95 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.94 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.92 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.75 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.69 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.53 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.5 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 96.38 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 96.31 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.27 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.21 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 96.11 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 95.96 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 95.87 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 95.8 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 95.8 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 95.72 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 95.7 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 95.59 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 95.17 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 94.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 94.75 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 94.66 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 94.63 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 94.58 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 94.47 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 94.47 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 94.43 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 94.41 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 94.21 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 93.92 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 93.79 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 93.7 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 93.5 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 93.43 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 93.41 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 93.4 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 93.38 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 93.25 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 93.15 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 93.02 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 92.99 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 92.77 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 92.7 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 92.63 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 92.53 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 92.02 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 91.6 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 91.47 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 91.36 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 91.33 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 91.06 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 90.98 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 90.94 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 90.51 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 90.18 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 89.86 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 89.49 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 89.21 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 88.74 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 88.61 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 88.54 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 88.49 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 88.48 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 88.43 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 88.04 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 88.02 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 87.98 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 87.85 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 87.79 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 87.68 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 87.65 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 87.61 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 87.23 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 87.07 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 86.92 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 86.67 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 86.4 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 86.24 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 85.91 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 85.86 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 85.5 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 85.48 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 85.24 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 85.13 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 85.09 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 85.05 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 84.97 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 84.88 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 84.88 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 84.11 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 83.63 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 83.34 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 83.32 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 82.95 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 82.39 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 82.17 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 82.16 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 81.92 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 81.84 | |
| 1qhu_A | 460 | Protein (hemopexin); beta propeller, HAEM binding | 81.65 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 81.0 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 80.94 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 80.82 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 80.77 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 80.62 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 80.47 |
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-70 Score=596.11 Aligned_cols=291 Identities=47% Similarity=0.856 Sum_probs=275.9
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|++|++.+.|++. ..+.|+++++..||++|+++|.+||+++++++|++||||||||+.+|+++|+..++++..
T Consensus 8 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCC--cccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 78999999998877654 345689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhh----HHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.. ...+|.+|.||.| +.||++++
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~ 231 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 231 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccc--cccCcccCCCCcc-eeeCHHHH
Confidence 9999999999999999999999999999999999999887665 899999999985 3579999999999 78999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 954 (975)
++||++|++++||||||++++||+++++++|||||||||||+..+|+||+|.+++++.+++++++|.
T Consensus 232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~ 298 (299)
T 3e7a_A 232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 298 (299)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred HHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999884
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-66 Score=569.09 Aligned_cols=291 Identities=32% Similarity=0.585 Sum_probs=270.7
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----EEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~----i~vvGDiHG~~~~L~~ll~~~g 721 (975)
++++++|++|.+.+ .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|+++|+..+
T Consensus 14 ~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~g 83 (315)
T 3h63_A 14 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 83 (315)
T ss_dssp HHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHhC
Confidence 56788999998753 588999999999999999999999999877 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+. .+|+
T Consensus 84 ~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~~----~l~~ 154 (315)
T 3h63_A 84 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 154 (315)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCH----HHHH
T ss_pred CCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhhh----HHHH
Confidence 987652 5999999999999999999999999999999999999999999999999999999999953 5999
Q ss_pred hhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCcee
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~ 880 (975)
.+.++|++||+++++++++||||||| ++.+.++++|+++.|+.+++..+ +++|||||||.. ..+|.+|.||.| +
T Consensus 155 ~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~g-~ 229 (315)
T 3h63_A 155 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 229 (315)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-E
T ss_pred HHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCC---CCCcCcCCCCce-E
Confidence 99999999999999999999999999 78889999999999999887655 899999999985 468999999999 6
Q ss_pred eeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEc-CCceEEeEEecCCCCCCC
Q 002047 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAIS 959 (975)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~~ 959 (975)
.||++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.++ +++...++++.+.+....
T Consensus 230 ~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~~~ 309 (315)
T 3h63_A 230 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNV 309 (315)
T ss_dssp EECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCSC
T ss_pred EECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999995 678899999998776553
Q ss_pred C
Q 002047 960 S 960 (975)
Q Consensus 960 ~ 960 (975)
.
T Consensus 310 ~ 310 (315)
T 3h63_A 310 K 310 (315)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-66 Score=574.25 Aligned_cols=294 Identities=35% Similarity=0.630 Sum_probs=270.8
Q ss_pred CChhHHHHH-HHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC------EEEEecCCCCHHHHHHH
Q 002047 644 INSVPKKVI-AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP------IKIFGDLHGQFGDLMRL 716 (975)
Q Consensus 644 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~------i~vvGDiHG~~~~L~~l 716 (975)
..++++++| ++|.+.+ .|+++++.+||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 346688899 7776542 589999999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCccc
Q 002047 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796 (975)
Q Consensus 717 l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~ 796 (975)
|+..|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||..||.++|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999986542 699999999999999999999999999999999999999999999999999999999995
Q ss_pred chhhhhhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCC
Q 002047 797 IWAWHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875 (975)
Q Consensus 797 ~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~r 875 (975)
..+|+.+.++|++||+++++++++||||||| +|.+.++++|+.|.|+.+++..+ +++|||||||.. ..+|.+|.|
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R 229 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR 229 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCC---cCCcccCCC
Confidence 4699999999999999999999999999999 78999999999999998877655 999999999985 468999999
Q ss_pred CCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcC-----------Cc
Q 002047 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-----------DL 944 (975)
Q Consensus 876 g~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~-----------~~ 944 (975)
|.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+..+|+||||.|++ ++
T Consensus 230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~ 308 (335)
T 3icf_A 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ 308 (335)
T ss_dssp C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred CCc-eeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccC
Confidence 999 689999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred eEEeEEecCCCCCCCCC
Q 002047 945 VVVPKLIHPLPPAISSP 961 (975)
Q Consensus 945 ~~~~~~~~~~~~~~~~~ 961 (975)
.+.++++.+++....-|
T Consensus 309 ~~~~~~f~~~~~~~~~p 325 (335)
T 3icf_A 309 NLIIETFEAVEHPDIKP 325 (335)
T ss_dssp TEEEEEECCCCCCSCCT
T ss_pred ceeEEEEecCCCCCCCc
Confidence 99999999987665433
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-66 Score=572.42 Aligned_cols=289 Identities=36% Similarity=0.616 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++.++++|++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 678899998753 589999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+. .+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~~----~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccch----hHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999953 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCccc-CCCCCceeee
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~-n~rg~~~~~f 882 (975)
++||+++++++++|||||||+|.+.++++|++|.|+.+++..+ +++|||||||.+... ..+|.+ +.||.| +.|
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F 247 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCc-eEE
Confidence 9999999999999999999999999999999999999887665 899999999986432 245764 589999 689
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCC------eEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCC
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 956 (975)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.+++++ ..++++.+.+-
T Consensus 248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h 326 (357)
T 3ll8_A 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 326 (357)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred ChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEECCc-ceEEEecCCCC
Confidence 9999999999999999999999999999999887 6999999999999999999999998876 67888887765
Q ss_pred CCC
Q 002047 957 AIS 959 (975)
Q Consensus 957 ~~~ 959 (975)
++.
T Consensus 327 p~~ 329 (357)
T 3ll8_A 327 PYW 329 (357)
T ss_dssp CCC
T ss_pred CCc
Confidence 553
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-64 Score=558.74 Aligned_cols=294 Identities=46% Similarity=0.838 Sum_probs=274.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+.|++.+.+++. ....|+++++..||++|+++|.+||+++++.+|++||||||||+.+|+++|+..++++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 78899999987665543 244689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+|||.+|++||+.||.++++||||||.+.++..|||.+||.++|+. .+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccH----HHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+++++++++||||||++|.+.++++|+.+.||.+.+..+ +++|+|||||.. ...+|.+|.||.+ +.||++++
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~ 232 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 232 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCcc--ccCCcCcccCCCc-eeeChHHH
Confidence 9999999999999999999999999999999999999876554 889999999986 3478999999999 78999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 957 (975)
++||+.+++++||||||++++||+++++++|||||||||||+.++|+||||.|++++.+++++++|.+..
T Consensus 233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~ 302 (330)
T 1fjm_A 233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKN 302 (330)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-63 Score=548.83 Aligned_cols=287 Identities=39% Similarity=0.726 Sum_probs=269.4
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCC
Q 002047 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA 726 (975)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~ 726 (975)
.++.+|+.|++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++..
T Consensus 9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 78 (309)
T 2ie4_C 9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT 78 (309)
T ss_dssp HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred HHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 3688999987642 589999999999999999999999999999999999999999999999999987755
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhcc
Q 002047 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (975)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (975)
+|||||||||||++|+|||.+|++||++||.++++||||||.+.++..|||.+||.++||.. .+|+.+.++
T Consensus 79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~ 149 (309)
T 2ie4_C 79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL 149 (309)
T ss_dssp ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred ------EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999864 589999999
Q ss_pred ccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHH
Q 002047 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (975)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (975)
|++||+++++++++|||||||+|.+.++++|+.++|+.+.+..+ .++|+||+||.. ..+|.++.||.| +.||+++
T Consensus 150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~ 224 (309)
T 2ie4_C 150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI 224 (309)
T ss_dssp TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred HHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCcc---ccccccCCCCcc-cccCHHH
Confidence 99999999999999999999999999999999999998877654 889999999985 478999999999 6899999
Q ss_pred HHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCC
Q 002047 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (975)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 957 (975)
+++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.+++++.+++++++|.+..
T Consensus 225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988764
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-63 Score=567.27 Aligned_cols=290 Identities=37% Similarity=0.617 Sum_probs=266.6
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++.+|++|++.+ .|+++++.+||++|+++|++||+++++.+||+|||||||||.+|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 577888887653 589999999999999999999999999999999999999999999999988887655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||+.||..+|+. .+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~~----~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhhh----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999963 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCcccC-CCCCceeee
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTF 882 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~n-~rg~~~~~f 882 (975)
++||+++++++++|||||||+|.+.++++|++|.|+.+++..+ +++|||||||..... ..+|.+| .||.| +.|
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F 260 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 260 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcc-ccc
Confidence 9999999999999999999999999999999999998877655 899999999986421 2568887 79999 789
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCC------eEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCC
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 956 (975)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.|+++ .+.++++.+.+-
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~ 339 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 339 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeCC-cceEEEecCCCC
Confidence 9999999999999999999999999999999987 599999999999999999999999998 588899988765
Q ss_pred CCCC
Q 002047 957 AISS 960 (975)
Q Consensus 957 ~~~~ 960 (975)
.+.-
T Consensus 340 p~~~ 343 (521)
T 1aui_A 340 PYWL 343 (521)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 5433
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-57 Score=530.83 Aligned_cols=289 Identities=33% Similarity=0.599 Sum_probs=267.2
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----EEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~----i~vvGDiHG~~~~L~~ll~~~g 721 (975)
..++++++.+.+.+ .+++.++..||.++.++|.+||++++++.| ++||||||||+.+|+++|+..+
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 34678888887542 478999999999999999999999999866 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
.++..+ .|||||||||||++|+||+.+|++||+++|.+|++||||||.+.++..|||..||.++|+. .+|.
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 876542 5999999999999999999999999999999999999999999999999999999999975 5999
Q ss_pred hhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCcee
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~ 880 (975)
.+.++|++||+++++++++||||||| ++...++++|+++.|+.+++..+ +++|+|||||.. ..+|.++.||.| +
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~-~ 382 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 382 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS-E
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCc---cCCcCcCCCCCc-e
Confidence 99999999999999999999999999 77888999999999998876554 899999999985 468999999999 6
Q ss_pred eeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEE-cCCceEEeEEecCCCCCC
Q 002047 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLPPAI 958 (975)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i-~~~~~~~~~~~~~~~~~~ 958 (975)
.||++++++||++||+++||||||++++||+++++|+|||||||||||+..+|.||+|.| ++++.+.++++.+.+...
T Consensus 383 ~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (477)
T 1wao_1 383 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 461 (477)
T ss_dssp EECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred eECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999 789999999999877554
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=354.32 Aligned_cols=280 Identities=19% Similarity=0.315 Sum_probs=230.5
Q ss_pred ecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcE
Q 002047 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW 162 (975)
Q Consensus 83 ~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W 162 (975)
...+..|.+|.+|+++.+ +++||+|||.. .. .++++++||+.+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~------------~~~i~v~GG~~-~~---------------------~~~~~~~~d~~~~~W 51 (308)
T 1zgk_A 6 HHHHSSGLVPRGSHAPKV------------GRLIYTAGGYF-RQ---------------------SLSYLEAYNPSNGTW 51 (308)
T ss_dssp ---------------CCC------------CCCEEEECCBS-SS---------------------BCCCEEEEETTTTEE
T ss_pred cccccCCeeeCCccccCC------------CCEEEEEeCcC-CC---------------------CcceEEEEcCCCCeE
Confidence 345677899999999998 78999999972 11 678999999999999
Q ss_pred EEecCCCCCCCCccceEEEEeCCEEEEEeccC---CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~---~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
+.+..+ |.+|.+|++++++++||++||.. ......+++++||+.+++ |+.++ ++|.+|.+|+++++++
T Consensus 52 ~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~- 122 (308)
T 1zgk_A 52 LRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--WSPCA---PMSVPRNRIGVGVIDG- 122 (308)
T ss_dssp EECCCC---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE--EEECC---CCSSCCBTCEEEEETT-
T ss_pred eECCCC---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe--EeECC---CCCcCccccEEEEECC-
Confidence 999765 89999999999999999999984 334457899999999975 99997 8999999999999987
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~ 319 (975)
+|||+||.++...++++++||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+... .+++++.|+..++
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~~~- 194 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM---LTRRIGVGVAV-LNRLLYAVGGFDGTN-RLNSAECYYPERN- 194 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT-
T ss_pred EEEEEcCCCCCcccccEEEECCCCC--eEeECCCC---CccccceEEEE-ECCEEEEEeCCCCCC-cCceEEEEeCCCC-
Confidence 8999999988778999999999999 99999865 34456555554 599999999998765 4899999998877
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
+|..+..+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 195 --~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 249 (308)
T 1zgk_A 195 --EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPM------------------ 249 (308)
T ss_dssp --EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCC------------------
T ss_pred --eEeeCCCC-CCccccceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCC------------------
Confidence 77777654 78999999999999999999987543 378999999999999999876
Q ss_pred ccCCCccceeEEEEECCEEEEEcCCCCCCCccceEeeecccc
Q 002047 400 AVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAA 441 (975)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~~ 441 (975)
|.+|..|++++++++|||+||+++...++|++++|....
T Consensus 250 ---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 250 ---KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp ---SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ---CCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 568999999999999999999998888999999997653
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=351.02 Aligned_cols=281 Identities=18% Similarity=0.206 Sum_probs=225.0
Q ss_pred CCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECC--CCcE
Q 002047 85 KEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TNKW 162 (975)
Q Consensus 85 ~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--t~~W 162 (975)
...+|.||.+|+++++ +++||||||.. .+++++||+. +++|
T Consensus 3 l~~lP~~r~~~~~~~~------------~~~iyv~GG~~-------------------------~~~~~~~d~~~~~~~W 45 (357)
T 2uvk_A 3 LPETPVPFKSGTGAID------------NDTVYIGLGSA-------------------------GTAWYKLDTQAKDKKW 45 (357)
T ss_dssp SCCCSSCCCSCEEEEE------------TTEEEEECGGG-------------------------TTCEEEEETTSSSCCE
T ss_pred CCCCCccccceEEEEE------------CCEEEEEeCcC-------------------------CCeEEEEccccCCCCe
Confidence 4678999999999998 79999999963 2489999998 4999
Q ss_pred EEecCCCCCC-CCccceEEEEeCCEEEEEeccC----CCCCccccEEEEEcCCCCCcEEEEEecCCCC-CCCcccEEEEe
Q 002047 163 SRITPFGEPP-TPRAAHVATAVGTMVVIQGGIG----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALV 236 (975)
Q Consensus 163 ~~l~~~g~~P-~pR~~hsa~~~~~~iyv~GG~~----~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P-~~R~~h~~~~~ 236 (975)
+.++++ | .+|.+|++++++++|||+||.+ .....++++|+||+.+++ |+.++ +++ .+|++|+++++
T Consensus 46 ~~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~---~~~p~~r~~~~~~~~ 117 (357)
T 2uvk_A 46 TALAAF---PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS--WVKLM---SHAPMGMAGHVTFVH 117 (357)
T ss_dssp EECCCC---TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE--EEECS---CCCSSCCSSEEEEEE
T ss_pred eECCCC---CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc--EEECC---CCCCcccccceEEEE
Confidence 999887 6 8999999999999999999982 233457999999999985 99998 555 99999999998
Q ss_pred CCcEEEEEcCCCCC----------------------------------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcc
Q 002047 237 GQRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (975)
Q Consensus 237 ~~~~lyV~GG~~g~----------------------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~ 282 (975)
++ +|||+||.++. ..++++++||+.++ +|+.+.+++ .+++
T Consensus 118 ~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p---~~~~ 191 (357)
T 2uvk_A 118 NG-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESP---WYGT 191 (357)
T ss_dssp TT-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECS---SCCC
T ss_pred CC-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCC---CCCc
Confidence 87 89999998753 25789999999999 999997653 3466
Q ss_pred eeEEEEEeCCeEEEecCCCCCCCCccceEEeec--CCCCeEEEEECCCCC-CCCcceeeEEEeCCEEEEEcCcCCCCC--
Q 002047 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGVS-PSPRYQHAAVFVNARLHVSGGALGGGR-- 357 (975)
Q Consensus 283 ~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~--~~~~~W~w~~~~g~~-P~~R~~hs~v~~~~~L~V~GG~~~~~~-- 357 (975)
.++++++.+++||||||.+......++++.|+. .++ +|..+..++ |..|.+|++++++++|||+||.+....
T Consensus 192 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 268 (357)
T 2uvk_A 192 AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRE 268 (357)
T ss_dssp BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHH
T ss_pred ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcc
Confidence 656667779999999998766656788988865 444 566666542 445778899999999999999754311
Q ss_pred -----------ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCC
Q 002047 358 -----------MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG 426 (975)
Q Consensus 358 -----------~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~ 426 (975)
......++++||+++++|+++..+ |.+|+.|++++++++||||||++.
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 269 NYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL---------------------SQGRAYGVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp HHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC---------------------SSCCBSSEEEEETTEEEEEEEECG
T ss_pred cccccceeccccccceeeEEEEecCCCceeeCCCC---------------------CCCcccceeEEeCCEEEEEeeeCC
Confidence 011246799999999999999877 568999999999999999999876
Q ss_pred C-CCccceEeeeccc
Q 002047 427 G-VLLDDLLVAEDLA 440 (975)
Q Consensus 427 ~-~~l~Dv~~ld~~~ 440 (975)
. ..++|+|.+++..
T Consensus 328 ~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 328 GGKAVTDSVLITVKD 342 (357)
T ss_dssp GGCEEEEEEEEEC-C
T ss_pred CCCEeeeEEEEEEcC
Confidence 4 5689999888764
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=335.95 Aligned_cols=262 Identities=23% Similarity=0.366 Sum_probs=225.8
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
+++||+|||.... ..+++++||+.+++|..+..+ |.+|.+|++++++++||++||
T Consensus 15 ~~~i~v~GG~~~~----------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 15 PKLMVVVGGQAPK----------------------AIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp CEEEEEECCBSSS----------------------BCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESC
T ss_pred CCEEEEECCCCCC----------------------CCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeC
Confidence 5789999997531 567999999999999999765 889999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.... ...+++++||+.+++ |+.++ ++|.+|++|+++++++ +|||+||.++...++++|+||+.++ +|+.+.
T Consensus 70 ~~~~-~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~ 140 (302)
T 2xn4_A 70 FNGS-LRVRTVDSYDPVKDQ--WTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVA 140 (302)
T ss_dssp BCSS-SBCCCEEEEETTTTE--EEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEEC
T ss_pred cCCC-ccccceEEECCCCCc--eeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecC
Confidence 8643 457899999999975 99998 8999999999999988 8999999988888999999999999 999998
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCC-CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcC
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~-~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG 351 (975)
+++ .+|..|++ +..+++||++||.+... ..+++++.|+..++ +|..+..+ |.+|..|++++++++|||+||
T Consensus 141 ~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 141 PMN---TRRSSVGV-GVVGGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CCS---SCCBSCEE-EEETTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCC---CcccCceE-EEECCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECC
Confidence 764 34555544 55699999999987654 35789999998877 66666554 789999999999999999999
Q ss_pred cCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCcc
Q 002047 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~ 431 (975)
.++.. ..+++++||+++++|+.+..+ |.+|..|+++.++++|||+||.++...++
T Consensus 213 ~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 213 HDGPL----VRKSVEVYDPTTNAWRQVADM---------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp BSSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCc----ccceEEEEeCCCCCEeeCCCC---------------------CCccccCeEEEECCEEEEECCcCCCcccc
Confidence 87643 368899999999999999876 56899999999999999999998888899
Q ss_pred ceEeeecccc
Q 002047 432 DLLVAEDLAA 441 (975)
Q Consensus 432 Dv~~ld~~~~ 441 (975)
+++++|....
T Consensus 268 ~v~~yd~~~~ 277 (302)
T 2xn4_A 268 SVEYYNPTTD 277 (302)
T ss_dssp CEEEEETTTT
T ss_pred cEEEEcCCCC
Confidence 9999997653
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=334.90 Aligned_cols=259 Identities=19% Similarity=0.297 Sum_probs=225.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
.+.||+|||.. ..+++++||+.+++|+.+..+ |.+|.+|++++++++||++||
T Consensus 11 ~~~l~~~GG~~------------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 63 (306)
T 3ii7_A 11 HDYRIALFGGS------------------------QPQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGG 63 (306)
T ss_dssp CCEEEEEECCS------------------------STTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECC
T ss_pred cceEEEEeCCC------------------------CCceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeC
Confidence 46899999964 256999999999999999876 889999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCC-CCCCCCcEEEEECCCCCcEEEEc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.. ....+++++||+.+++ |+.++ ++|.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+
T Consensus 64 ~~--~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~ 133 (306)
T 3ii7_A 64 SQ--LFPIKRMDCYNVVKDS--WYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTK 133 (306)
T ss_dssp BS--SSBCCEEEEEETTTTE--EEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEE
T ss_pred CC--CCCcceEEEEeCCCCe--EEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeC
Confidence 86 5568999999999985 99998 8999999999999987 899999997 6677999999999999 99999
Q ss_pred cCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC---ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEE
Q 002047 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP---LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (975)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~---l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V 348 (975)
.+++ .+|..|++ +..+++||++||.+..... +++++.|++.++ +|..++.+ |.+|..|++++++++|||
T Consensus 134 ~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 134 PSML---TQRCSHGM-VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp CCCS---SCCBSCEE-EEETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEE
T ss_pred CCCc---CCcceeEE-EEECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEE
Confidence 7754 34555555 4569999999998766533 899999998877 66677654 789999999999999999
Q ss_pred EcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCC
Q 002047 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGV 428 (975)
Q Consensus 349 ~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~ 428 (975)
+||.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++..
T Consensus 206 ~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 206 VGGQNGLG----GLDNVEYYDIKLNEWKMVSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp ECCEETTE----EBCCEEEEETTTTEEEECCCC---------------------SCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred EeCCCCCC----CCceEEEeeCCCCcEEECCCC---------------------CCCccceeEEEECCEEEEEeCcCCCe
Confidence 99987653 378899999999999999876 56899999999999999999999888
Q ss_pred CccceEeeecccc
Q 002047 429 LLDDLLVAEDLAA 441 (975)
Q Consensus 429 ~l~Dv~~ld~~~~ 441 (975)
.++++|++|....
T Consensus 261 ~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 261 RLGHILEYNTETD 273 (306)
T ss_dssp BCCEEEEEETTTT
T ss_pred eeeeEEEEcCCCC
Confidence 9999999997653
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=331.42 Aligned_cols=264 Identities=21% Similarity=0.321 Sum_probs=226.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
+++||+|||...... ..+++++||+.+++|..++.+ |.+|.+|++++++++||++||
T Consensus 14 ~~~i~~~GG~~~~~~--------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS--------------------PIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTTE--------------------ECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCCc--------------------ceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcC
Confidence 679999999432211 788999999999999999865 789999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCC-CcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc
Q 002047 193 IGPAGLSAEDLHVLDLTQQR-PRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~-~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.. .....+++++||+.+++ .+|+.++ ++|.+|.+|+++++++ +|||+||.++...++++|+||+.++ +|+.+
T Consensus 71 ~~-~~~~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~ 143 (301)
T 2vpj_A 71 YD-GRSRLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWSML 143 (301)
T ss_dssp BC-SSCBCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEEEE
T ss_pred CC-CCccCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEEEC
Confidence 86 34567899999998862 1299996 8999999999999987 8999999998888999999999999 99999
Q ss_pred cCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcC
Q 002047 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (975)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG 351 (975)
.+++ .+|..|++ ++.+++||++||.+... .+++++.|++.++ +|..+..+ |.+|..|+++.++++|||+||
T Consensus 144 ~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG 214 (301)
T 2vpj_A 144 GDMQ---TAREGAGL-VVASGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVVGG 214 (301)
T ss_dssp EECS---SCCBSCEE-EEETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCCC---CCcccceE-EEECCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEEeC
Confidence 8764 34555555 45599999999987765 6899999998877 66666544 789999999999999999999
Q ss_pred cCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCcc
Q 002047 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~ 431 (975)
.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++...++
T Consensus 215 ~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 215 FDGTA----HLSSVEAYNIRTDSWTTVTSM---------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp BCSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBEE
T ss_pred CCCCc----ccceEEEEeCCCCcEEECCCC---------------------CCcccceeEEEECCEEEEEcCcCCCcccc
Confidence 87653 278899999999999999876 56899999999999999999998888889
Q ss_pred ceEeeeccc
Q 002047 432 DLLVAEDLA 440 (975)
Q Consensus 432 Dv~~ld~~~ 440 (975)
+++++|...
T Consensus 270 ~v~~yd~~~ 278 (301)
T 2vpj_A 270 SIECYDPII 278 (301)
T ss_dssp EEEEEETTT
T ss_pred cEEEEcCCC
Confidence 999999764
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=327.74 Aligned_cols=260 Identities=19% Similarity=0.298 Sum_probs=219.9
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|......|.+|++|+++++ +++||||||..... .++++++||+.+
T Consensus 40 ~~W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~---------------------~~~~~~~~d~~~ 86 (302)
T 2xn4_A 40 ERWHQVAELPSRRCRAGMVYM------------AGLVFAVGGFNGSL---------------------RVRTVDSYDPVK 86 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEE------------TTEEEEESCBCSSS---------------------BCCCEEEEETTT
T ss_pred CcEeEcccCCcccccceEEEE------------CCEEEEEeCcCCCc---------------------cccceEEECCCC
Confidence 345556789999999999998 78999999986432 678999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
++|+.++++ |.+|..|++++++++||++||... ....+++++||+.+++ |+.++ ++|.+|++|+++++++
T Consensus 87 ~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~- 156 (302)
T 2xn4_A 87 DQWTSVANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNE--WFHVA---PMNTRRSSVGVGVVGG- 156 (302)
T ss_dssp TEEEEECCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTTE--EEEEC---CCSSCCBSCEEEEETT-
T ss_pred CceeeCCCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCCe--EeecC---CCCCcccCceEEEECC-
Confidence 999999876 899999999999999999999864 3457899999999875 99997 8999999999999988
Q ss_pred EEEEEcCCCCCC--CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCC
Q 002047 240 YLMAIGGNDGKR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (975)
Q Consensus 240 ~lyV~GG~~g~~--~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~ 317 (975)
+|||+||.++.. .++++++||+.++ +|+.+.+++ .+|..| ++++.+++||++||.++.. .+++++.|+..+
T Consensus 157 ~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~-~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~ 229 (302)
T 2xn4_A 157 LLYAVGGYDVASRQCLSTVECYNATTN--EWTYIAEMS---TRRSGA-GVGVLNNLLYAVGGHDGPL-VRKSVEVYDPTT 229 (302)
T ss_dssp EEEEECCEETTTTEECCCEEEEETTTT--EEEEECCCS---SCCBSC-EEEEETTEEEEECCBSSSS-BCCCEEEEETTT
T ss_pred EEEEEeCCCCCCCccccEEEEEeCCCC--cEEECCCCc---cccccc-cEEEECCEEEEECCCCCCc-ccceEEEEeCCC
Confidence 899999997653 5899999999999 999997653 445555 4455699999999987654 578999999887
Q ss_pred CCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc-cCcCCCCCCCCccccCC
Q 002047 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK-SVVTSPRTGRYSADAAG 396 (975)
Q Consensus 318 ~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~-~~~~~p~~~~~~~~~~~ 396 (975)
+ +|..+..+ |.+|..|+++.++++|||+||.++.. ..+++++||+++++|+.+. .+
T Consensus 230 ~---~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~--------------- 286 (302)
T 2xn4_A 230 N---AWRQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCM--------------- 286 (302)
T ss_dssp T---EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCC---------------
T ss_pred C---CEeeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCccc---------------
Confidence 7 66666654 68999999999999999999987643 3788999999999999986 45
Q ss_pred CCCccCCCccceeEEEEECCEE
Q 002047 397 GDAAVELTRRCRHAAAAVGDLI 418 (975)
Q Consensus 397 ~~~~~~p~~R~~hsa~~~~~~L 418 (975)
+.+|+.|++++++++|
T Consensus 287 ------~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 287 ------STGRSYAGVTVIDKRL 302 (302)
T ss_dssp ------SSCCBSCEEEEEEC--
T ss_pred ------CcccccceEEEecccC
Confidence 5689999999998875
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=327.80 Aligned_cols=260 Identities=18% Similarity=0.228 Sum_probs=223.9
Q ss_pred eeeEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEEC
Q 002047 78 VNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV 157 (975)
Q Consensus 78 ~~~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~ 157 (975)
....|......|.||.+|+++++ +++||||||.. .. .++++++||+
T Consensus 32 ~~~~W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~-~~---------------------~~~~~~~~d~ 77 (306)
T 3ii7_A 32 KDYSWTDIRCPFEKRRDAACVFW------------DNVVYILGGSQ-LF---------------------PIKRMDCYNV 77 (306)
T ss_dssp TTTEEEECCCCSCCCBSCEEEEE------------TTEEEEECCBS-SS---------------------BCCEEEEEET
T ss_pred CCCCEecCCCCCcccceeEEEEE------------CCEEEEEeCCC-CC---------------------CcceEEEEeC
Confidence 33456677889999999999998 78999999986 21 7889999999
Q ss_pred CCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC
Q 002047 158 LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (975)
Q Consensus 158 ~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~ 237 (975)
.+++|+.+.++ |.+|.+|++++++++|||+||........+++++||+.+++ |+.++ ++|.+|++|+++.++
T Consensus 78 ~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~ 149 (306)
T 3ii7_A 78 VKDSWYSKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKP---SMLTQRCSHGMVEAN 149 (306)
T ss_dssp TTTEEEEEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEEC---CCSSCCBSCEEEEET
T ss_pred CCCeEEECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCC---CCcCCcceeEEEEEC
Confidence 99999999876 89999999999999999999987566678999999999975 99986 899999999999998
Q ss_pred CcEEEEEcCCCCCCC----CCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEe
Q 002047 238 QRYLMAIGGNDGKRP----LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGL 313 (975)
Q Consensus 238 ~~~lyV~GG~~g~~~----~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~ 313 (975)
+ +|||+||.++... ++++++||+.++ +|+.+.+++ .+|..|++ ++.+++||++||.+... .+++++.|
T Consensus 150 ~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~i~v~GG~~~~~-~~~~~~~y 221 (306)
T 3ii7_A 150 G-LIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMI---EARKNHGL-VFVKDKIFAVGGQNGLG-GLDNVEYY 221 (306)
T ss_dssp T-EEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCS---SCCBSCEE-EEETTEEEEECCEETTE-EBCCEEEE
T ss_pred C-EEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCcc---chhhcceE-EEECCEEEEEeCCCCCC-CCceEEEe
Confidence 8 8999999977655 899999999999 999998654 34555555 44599999999987664 67899999
Q ss_pred ecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccc
Q 002047 314 AKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSAD 393 (975)
Q Consensus 314 ~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~ 393 (975)
++.++ +|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.+..+
T Consensus 222 d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~------------ 281 (306)
T 3ii7_A 222 DIKLN---EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKV------------ 281 (306)
T ss_dssp ETTTT---EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEE------------
T ss_pred eCCCC---cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCc------------
Confidence 99887 77777655 78999999999999999999987654 378999999999999999887
Q ss_pred cCCCCCccCCCccceeEEEEECC
Q 002047 394 AAGGDAAVELTRRCRHAAAAVGD 416 (975)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~~~~~ 416 (975)
|.+|.+|+++++.+
T Consensus 282 ---------~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 282 ---------RAFPVTSCLICVVD 295 (306)
T ss_dssp ---------ECCSCTTCEEEEEE
T ss_pred ---------ccccceeEEEEECC
Confidence 56899999888754
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=325.77 Aligned_cols=260 Identities=22% Similarity=0.327 Sum_probs=220.7
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|......|.||.+|+++++ +++||||||...... ....++++++||+.+
T Consensus 49 ~~W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~~-----------------~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 49 GTWLRLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPD-----------------GNTDSSALDCYNPMT 99 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETT-----------------EEEECCCEEEEETTT
T ss_pred CeEeECCCCCcccccceEEEE------------CCEEEEECCCcCCCC-----------------CCeecceEEEECCCC
Confidence 445666889999999999998 789999999731100 001678999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
++|+.++++ |.+|..|++++++++||++||.... ...+++++||+.+++ |+.++ ++|.+|++|+++++++
T Consensus 100 ~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~--W~~~~---~~p~~r~~~~~~~~~~- 169 (308)
T 1zgk_A 100 NQWSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDE--WHLVA---PMLTRRIGVGVAVLNR- 169 (308)
T ss_dssp TEEEECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTE--EEECC---CCSSCCBSCEEEEETT-
T ss_pred CeEeECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCe--EeECC---CCCccccceEEEEECC-
Confidence 999999876 8899999999999999999997543 357899999999975 99987 8999999999999987
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~ 319 (975)
+|||+||.++...++++++||+.++ +|+.+.+++ .+|..|+++ +.+++|||+||.+... .+++++.|++.++
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~- 241 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMN---TIRSGAGVC-VLHNCIYAAGGYDGQD-QLNSVERYDVETE- 241 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT-
T ss_pred EEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCC---CccccceEE-EECCEEEEEeCCCCCC-ccceEEEEeCCCC-
Confidence 8999999988777999999999999 999997653 446656554 5599999999998654 5899999999877
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
+|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.+..+
T Consensus 242 --~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 296 (308)
T 1zgk_A 242 --TWTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM------------------ 296 (308)
T ss_dssp --EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC------------------
T ss_pred --cEEECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCC------------------
Confidence 77777754 78999999999999999999987643 378999999999999999887
Q ss_pred ccCCCccceeEEEEE
Q 002047 400 AVELTRRCRHAAAAV 414 (975)
Q Consensus 400 ~~~p~~R~~hsa~~~ 414 (975)
|.+|+.|+++++
T Consensus 297 ---p~~r~~~~~~~l 308 (308)
T 1zgk_A 297 ---TSGRSGVGVAVT 308 (308)
T ss_dssp ---SSCCBSCEEEEC
T ss_pred ---CCCcccceeEeC
Confidence 669999999874
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=319.72 Aligned_cols=257 Identities=21% Similarity=0.324 Sum_probs=220.4
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|......|.+|.+|+++++ +++||||||..... ..+++++||+.+
T Consensus 41 ~~W~~~~~~p~~r~~~~~~~~------------~~~l~v~GG~~~~~---------------------~~~~~~~~d~~~ 87 (301)
T 2vpj_A 41 QEWSFLPSITRKRRYVASVSL------------HDRIYVIGGYDGRS---------------------RLSSVECLDYTA 87 (301)
T ss_dssp TEEEECCCCSSCCBSCEEEEE------------TTEEEEECCBCSSC---------------------BCCCEEEEETTC
T ss_pred CeEEeCCCCChhhccccEEEE------------CCEEEEEcCCCCCc---------------------cCceEEEEECCC
Confidence 345566688999999999998 78999999986322 778999999999
Q ss_pred Cc---EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe
Q 002047 160 NK---WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (975)
Q Consensus 160 ~~---W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~ 236 (975)
++ |+.+.++ |.+|..|++++++++||++||.... ...+++++||+.+++ |+.++ ++|.+|.+|+++++
T Consensus 88 ~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 88 DEDGVWYSVAPM---NVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQ--WSMLG---DMQTAREGAGLVVA 158 (301)
T ss_dssp CTTCCCEEECCC---SSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTE--EEEEE---ECSSCCBSCEEEEE
T ss_pred CCCCeeEECCCC---CCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCe--EEECC---CCCCCcccceEEEE
Confidence 99 9999776 8899999999999999999998643 347899999999875 99998 78999999999999
Q ss_pred CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecC
Q 002047 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH 316 (975)
Q Consensus 237 ~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~ 316 (975)
++ +||++||.++...++++++||+.++ +|+.+.++ |.+|..|++ +..+++||++||.+... .+++++.|+..
T Consensus 159 ~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~i~v~GG~~~~~-~~~~v~~yd~~ 230 (301)
T 2vpj_A 159 SG-VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGV-ALLNDHIYVVGGFDGTA-HLSSVEAYNIR 230 (301)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEECCBCSSS-BCCCEEEEETT
T ss_pred CC-EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceE-EEECCEEEEEeCCCCCc-ccceEEEEeCC
Confidence 87 8999999988888999999999999 99999765 344555554 55599999999998665 58899999888
Q ss_pred CCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCC
Q 002047 317 RDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAG 396 (975)
Q Consensus 317 ~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~ 396 (975)
++ +|..+..+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 231 ~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~--------------- 287 (301)
T 2vpj_A 231 TD---SWTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSM--------------- 287 (301)
T ss_dssp TT---EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEE---------------
T ss_pred CC---cEEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCC---------------
Confidence 77 66666654 78999999999999999999987643 367899999999999999887
Q ss_pred CCCccCCCccceeEEEEEC
Q 002047 397 GDAAVELTRRCRHAAAAVG 415 (975)
Q Consensus 397 ~~~~~~p~~R~~hsa~~~~ 415 (975)
|.+|+.|+++++.
T Consensus 288 ------~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 ------GTQRCDAGVCVLR 300 (301)
T ss_dssp ------EEEEESCEEEEEE
T ss_pred ------CcccccceEEEeC
Confidence 5699999999874
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=329.90 Aligned_cols=267 Identities=18% Similarity=0.254 Sum_probs=220.3
Q ss_pred CCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEec
Q 002047 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (975)
Q Consensus 87 ~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (975)
+.|.||.+|+++++ +++||||||........ .....+++++||+.+++|+.++
T Consensus 31 ~~p~~r~~~~~~~~------------~~~iyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 31 SSQVPKNHVSLVTK------------ENQVFVAGGLFYNEDNK---------------EDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp CCCSCSSEEEEECT------------TCCEEEEEEEEECSSCS---------------SSCEEEEEEEEETTTTEEEECC
T ss_pred CCCCCccceEEEEE------------CCEEEEEcCcccCCCCC---------------ccccccceEEecCCCCeEEECC
Confidence 34779999999987 78999999963211100 0015678999999999999998
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeccC--CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEE
Q 002047 167 PFGEPPTPRAAHVATAVGTMVVIQGGIG--PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (975)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~iyv~GG~~--~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~ 244 (975)
++ |.+|.+|++++++++||++||.. ......+++++||+.+++ |+.++ ++|.+|++|+++++++ +|||+
T Consensus 84 ~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~ 154 (315)
T 4asc_A 84 PL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESD---PLPYVVYGHTVLSHMD-LVYVI 154 (315)
T ss_dssp CB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECC---CCSSCCBSCEEEEETT-EEEEE
T ss_pred CC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECC---CCCCcccceeEEEECC-EEEEE
Confidence 76 89999999999999999999975 345678999999999975 99987 8999999999999998 89999
Q ss_pred cCC-CCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEE
Q 002047 245 GGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (975)
Q Consensus 245 GG~-~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w 323 (975)
||. ++...++++|+||+.++ +|+.+.+++ .+|..|+++ +.+++|||+||.+... .+++++.|++.++ +|
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 224 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF--EWKELAPMQ---TARSLFGAT-VHDGRIIVAAGVTDTG-LTSSAEVYSITDN---KW 224 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEEE-EETTEEEEEEEECSSS-EEEEEEEEETTTT---EE
T ss_pred eCCCCCCcccceEEEEeCCCC--eEEECCCCC---CchhceEEE-EECCEEEEEeccCCCC-ccceEEEEECCCC---eE
Confidence 999 56677999999999999 999998763 445555554 5599999999987765 6889999998877 66
Q ss_pred EECCCCCCCCcceeeEEEeCCEEEEEcCcCCC----CC-ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCC
Q 002047 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GR-MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (975)
Q Consensus 324 ~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~----~~-~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (975)
..+..+ |.+|..|++++++++|||+||.+.. +. .....+++|+||+++++|+.+.
T Consensus 225 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------------------- 284 (315)
T 4asc_A 225 APFEAF-PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------------------- 284 (315)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE-------------------
T ss_pred EECCCC-CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc-------------------
Confidence 666654 7999999999999999999998532 11 0124688999999999999983
Q ss_pred CccCCCccceeEEEEECCEEEEEcC
Q 002047 399 AAVELTRRCRHAAAAVGDLIFIYGG 423 (975)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~LyV~GG 423 (975)
+.+|..|++++++++|||+..
T Consensus 285 ----~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 285 ----REIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ----SCSSCCSSCEEEEEEECGGGS
T ss_pred ----cCCcCccceEEeCCEEEEEEe
Confidence 338999999999999999876
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=323.13 Aligned_cols=248 Identities=18% Similarity=0.264 Sum_probs=209.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccC-----CCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIG-----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~-----~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
++++||+.+++|.. ..+ ..|.+|.+|++++++++||++||.. ......+++++||+.+++ |+.++ ++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--WLGMP---PLP 86 (315)
T ss_dssp EEEEEETTTTEEEE-EEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--EEECC---CBS
T ss_pred ceEEECCCCCeEec-CCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe--EEECC---CCC
Confidence 78999999999997 333 1367999999999999999999962 233445779999999975 99987 899
Q ss_pred CCCcccEEEEeCCcEEEEEcCCC---CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGND---GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~---g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.+++ .+|..|++ +..+++||++||.+.
T Consensus 87 ~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLP---YVVYGHTV-LSHMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEE-EEETTEEEEECCBCT
T ss_pred cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCC---CcccceeE-EEECCEEEEEeCCCC
Confidence 9999999999988 899999974 4677999999999999 999998753 34555555 457999999999966
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCc
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~ 382 (975)
....+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~- 230 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAGVTDTG----LTSSAEVYSITDNKWAPFEAF- 230 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEEECSSS----EEEEEEEEETTTTEEEEECCC-
T ss_pred CCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEeccCCCC----ccceEEEEECCCCeEEECCCC-
Confidence 6668999999999887 77787765 78999999999999999999987654 367899999999999999876
Q ss_pred CCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCC---------CCccceEeeecccc
Q 002047 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG---------VLLDDLLVAEDLAA 441 (975)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~---------~~l~Dv~~ld~~~~ 441 (975)
|.+|..|++++++++|||+||.++. ..++|+|++|....
T Consensus 231 --------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp --------------------SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred --------------------CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 5689999999999999999997531 56899999997653
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=320.70 Aligned_cols=248 Identities=17% Similarity=0.271 Sum_probs=206.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCC-----CCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~-----~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
++++||+.+++|...... .|.+|.+|++++++++||++||.... ....+++++||+.+++ |+.++ ++|
T Consensus 25 ~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p 97 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE--WVGLP---PLP 97 (318)
T ss_dssp EEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE--EEECS---CBS
T ss_pred ceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc--EEECC---CCC
Confidence 478999999999985322 36789999999999999999996321 1234569999999874 99987 899
Q ss_pred CCCcccEEEEeCCcEEEEEcCCC--CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~--g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~ 303 (975)
.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.+++ .+|..|++ ++.+++||++||.+..
T Consensus 98 ~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 98 SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLP---IKVYGHNV-ISHNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCS---SCEESCEE-EEETTEEEEECCEESS
T ss_pred ccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCC---CcccccEE-EEECCEEEEEcCCCCC
Confidence 9999999999987 899999986 4567899999999999 999998653 34555554 4579999999998766
Q ss_pred CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcC
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~ 383 (975)
...+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 171 ~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-- 240 (318)
T 2woz_A 171 KKCTNRVFIYNPKKG---DWKDLAPM-KTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEF-- 240 (318)
T ss_dssp SCBCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCC--
T ss_pred CCccceEEEEcCCCC---EEEECCCC-CCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCC--
Confidence 667899999998877 66666654 78999999999999999999987643 367899999999999999876
Q ss_pred CCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCC---------CCCccceEeeecccc
Q 002047 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG---------GVLLDDLLVAEDLAA 441 (975)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~---------~~~l~Dv~~ld~~~~ 441 (975)
|.+|..|++++++++|||+||.+. ...++|+|++|....
T Consensus 241 -------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 241 -------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp -------------------SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred -------------------CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 568999999999999999999765 246899999997653
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-35 Score=324.09 Aligned_cols=267 Identities=17% Similarity=0.275 Sum_probs=217.6
Q ss_pred CCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEec
Q 002047 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (975)
Q Consensus 87 ~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (975)
..|.||.+|+++++ +++||||||........ .....+++++||+.+++|+.++
T Consensus 42 ~~~~~r~~~~~~~~------------~~~lyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 42 AEQIPRNHSSIVTQ------------QNQVYVVGGLYVDEENK---------------DQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp CTTSCSSEEEEECS------------SSCEEEEESSCC----------------------CCCBEEEEEETTTTEEEECS
T ss_pred CccCCccceEEEEE------------CCEEEEECCcccCcccc---------------CCCccccEEEEeCCCCcEEECC
Confidence 44689999999887 78999999964321100 0014567999999999999998
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeccCC-CCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEc
Q 002047 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (975)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~iyv~GG~~~-~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~G 245 (975)
++ |.+|..|++++++++|||+||... .....+++++||+.+++ |+.+. ++|.+|++|+++++++ +|||+|
T Consensus 95 ~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 165 (318)
T 2woz_A 95 PL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVK---NLPIKVYGHNVISHNG-MIYCLG 165 (318)
T ss_dssp CB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEEC---CCSSCEESCEEEEETT-EEEEEC
T ss_pred CC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECC---CCCCcccccEEEEECC-EEEEEc
Confidence 76 889999999999999999999863 45668999999999975 99997 8999999999999988 899999
Q ss_pred CCC-CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEE
Q 002047 246 GND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (975)
Q Consensus 246 G~~-g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~ 324 (975)
|.+ +...++++|+||+.++ +|+.+.+++ .+|..|++ ++.+++|||+||.+... .+++++.|++.++ +|.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~ 235 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKG--DWKDLAPMK---TPRSMFGV-AIHKGKIVIAGGVTEDG-LSASVEAFDLKTN---KWE 235 (318)
T ss_dssp CEESSSCBCCCEEEEETTTT--EEEEECCCS---SCCBSCEE-EEETTEEEEEEEEETTE-EEEEEEEEETTTC---CEE
T ss_pred CCCCCCCccceEEEEcCCCC--EEEECCCCC---CCcccceE-EEECCEEEEEcCcCCCC-ccceEEEEECCCC---eEE
Confidence 984 4567899999999999 999998653 44555555 55699999999987654 5789999988877 667
Q ss_pred ECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCC-----ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 325 ~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~-----~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
.+..+ |.+|..|++++++++|||+||.+.... .....+++|+||+++++|+++ +
T Consensus 236 ~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~------------------ 294 (318)
T 2woz_A 236 VMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L------------------ 294 (318)
T ss_dssp ECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E------------------
T ss_pred ECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c------------------
Confidence 77654 789999999999999999999865311 012368999999999999998 3
Q ss_pred ccCCCccceeEEEEECCEEEEEcC
Q 002047 400 AVELTRRCRHAAAAVGDLIFIYGG 423 (975)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyV~GG 423 (975)
+.+|+.|++++++++|||+..
T Consensus 295 ---~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 295 ---KEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ---SCCGGGTTCEEEEEEEEGGGC
T ss_pred ---ccccccccceeeCCEEEEEEe
Confidence 348999999999999999853
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=353.69 Aligned_cols=295 Identities=14% Similarity=0.159 Sum_probs=236.2
Q ss_pred CCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEE
Q 002047 85 KEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSR 164 (975)
Q Consensus 85 ~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~ 164 (975)
....|.+|++|+++ + +++||||||... . ..+++++||+.+++|+.
T Consensus 382 ~~~~p~rr~g~~~~-~------------~~~iyv~GG~~~-~---------------------~~~~v~~yd~~~~~W~~ 426 (695)
T 2zwa_A 382 CECPINRKFGDVDV-A------------GNDVFYMGGSNP-Y---------------------RVNEILQLSIHYDKIDM 426 (695)
T ss_dssp CCCTTCCBSCEEEE-C------------SSCEEEECCBSS-S---------------------BCCCEEEEEECSSCEEE
T ss_pred cCCCCCCceeEEEE-E------------CCEEEEECCCCC-C---------------------CcCcEEEEECCCCeEEE
Confidence 35678888887766 5 688999999764 2 67899999999999999
Q ss_pred ec-C--CCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 165 IT-P--FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 165 l~-~--~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
+. + .+..|.+|.+|+++++ +++|||+||.......++++|+||+.+++ |+.+. ++|.+|++|+++++.++
T Consensus 427 ~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~--W~~~~---~~p~~R~~h~~~~~~~~ 501 (695)
T 2zwa_A 427 KNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE--WSMIK---SLSHTRFRHSACSLPDG 501 (695)
T ss_dssp EECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE--EEECC---CCSBCCBSCEEEECTTS
T ss_pred eccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc--EEECC---CCCCCcccceEEEEcCC
Confidence 98 5 2456999999999999 99999999997666678999999999985 99996 89999999999997334
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-C-CeEEEecCCCCCC-CCccceEEeecC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D-GLLLLCGGRDASS-VPLASAYGLAKH 316 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~-g~lyvfGG~~~~~-~~l~d~~~~~~~ 316 (975)
+||||||.++.. ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||||||...++ ..++++|.|++.
T Consensus 502 ~iyv~GG~~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 502 NVLILGGVTEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp CEEEECCBCSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred EEEEECCCCCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 899999997765 9999999999 999999877677788888866654 2 8999999986654 568999999888
Q ss_pred CCCeE----EEEECCCCCCCCcceeeEEEeC-CEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCc
Q 002047 317 RDGRW----EWAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYS 391 (975)
Q Consensus 317 ~~~~W----~w~~~~g~~P~~R~~hs~v~~~-~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~ 391 (975)
++ .| +|..+..+++.+|.+|++++++ ++|||+||.+.... ....+++++||+.+++|+.+......
T Consensus 577 ~~-~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~------- 647 (695)
T 2zwa_A 577 AE-NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRI------- 647 (695)
T ss_dssp TT-CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHH-------
T ss_pred CC-ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeeccccc-------
Confidence 76 43 4666655556899999999999 99999999865432 13478899999999999954321000
Q ss_pred cccCCCCCccCCCccceeEEEEECC-EEEEEcC----CCCCCCccceEeeeccc
Q 002047 392 ADAAGGDAAVELTRRCRHAAAAVGD-LIFIYGG----LRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 392 ~~~~~~~~~~~p~~R~~hsa~~~~~-~LyV~GG----~~~~~~l~Dv~~ld~~~ 440 (975)
....+..+.+|+++.+++ +|||+|| +..+..+|++|.+|+..
T Consensus 648 -------~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 648 -------WEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp -------HHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred -------cCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 000112678899998877 9999999 34567889999999753
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-36 Score=335.90 Aligned_cols=243 Identities=18% Similarity=0.202 Sum_probs=189.9
Q ss_pred HhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 002047 687 FSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKV---EY 761 (975)
Q Consensus 687 ~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~---~~ 761 (975)
|++|++++...++|+|||||||++.+|.++|+..++++.+..+ ....+||||||||||++++||+.+|++|+. .+
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999999999999999999999876533211 112799999999999999999999999986 79
Q ss_pred CCCEEEEeccccccchhhhc----CChHHHHHHhCCcccchhhhhhh---ccccccceEEEEcceEEEecCCccCccc--
Q 002047 762 PNNVHLIRGNHEAADINALF----GFRIECIERMGERDGIWAWHRIN---RLFNWLPLAALIEKKIICMHGGIGRSIN-- 832 (975)
Q Consensus 762 P~~v~llrGNHE~~~~~~~~----gf~~e~~~~~g~~~~~~~~~~~~---~~f~~LPlaa~i~~~il~vHgGi~~~~~-- 832 (975)
|.++++||||||.+.++..+ +.+..+.+.++.. ...+|..+. ++|..||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 99999999999999886421 1222222223322 234555444 4555669999887 79999999999874
Q ss_pred --CHhhhhhccCCcccCC----CCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEecccc
Q 002047 833 --HVEQIENLQRPITMEA----GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECV 906 (975)
Q Consensus 833 --~~~~i~~i~rp~~~~~----~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~ 906 (975)
++++|+.+.|+..... ....++++||+||.. .| .||.....||.+++++||+.+++++|||||+++
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~~ 289 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTSQ 289 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSCC
T ss_pred CCCHHHHHHHhhhhccccccccccCHHHHhccCCCCC-----CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCcc
Confidence 8999998888632110 012567999999864 24 466522479999999999999999999999999
Q ss_pred ccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCc
Q 002047 907 MDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (975)
Q Consensus 907 ~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~ 944 (975)
++ +...+++++|||||+++|. |.+++|.|+++.
T Consensus 290 ~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~ 322 (342)
T 2z72_A 290 ER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR 322 (342)
T ss_dssp SS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred cc-hhhhcCCCEEEEECCCCCC----CcEEEEEEECCE
Confidence 76 6677899999999999994 678888888764
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=291.42 Aligned_cols=253 Identities=22% Similarity=0.286 Sum_probs=194.0
Q ss_pred EeecCCCCC-CCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCcccccccccCcEEEEECC
Q 002047 81 VIEKKEDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL 158 (975)
Q Consensus 81 ~~~~~~~~P-~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~ 158 (975)
.|......| .||++|+++++ +++||||||... ... ....++++++||+.
T Consensus 44 ~W~~~~~~p~~~R~~~~~~~~------------~~~lyv~GG~~~~~~~-----------------~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 44 KWTALAAFPGGPRDQATSAFI------------DGNLYVFGGIGKNSEG-----------------LTQVFNDVHKYNPK 94 (357)
T ss_dssp CEEECCCCTTCCCBSCEEEEE------------TTEEEEECCEEECTTS-----------------CEEECCCEEEEETT
T ss_pred CeeECCCCCCCcCccceEEEE------------CCEEEEEcCCCCCCCc-----------------cceeeccEEEEeCC
Confidence 345667788 89999999999 789999999722 110 01178999999999
Q ss_pred CCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCC---------------------------------CccccEEE
Q 002047 159 TNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG---------------------------------LSAEDLHV 205 (975)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~---------------------------------~~~~dv~~ 205 (975)
+++|+++.++. |.+|.+|++++++++|||+||..... ...+++++
T Consensus 95 ~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 95 TNSWVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp TTEEEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred CCcEEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 99999999884 79999999999999999999975321 23589999
Q ss_pred EEcCCCCCcEEEEEecCCCCCCC-cccEEEEeCCcEEEEEcCCCCC-CCCCcEEEEEC--CCCCcEEEEccCCCCCCCCc
Q 002047 206 LDLTQQRPRWHRVVVQGPGPGPR-YGHVMALVGQRYLMAIGGNDGK-RPLADVWALDT--AAKPYEWRKLEPEGEGPPPC 281 (975)
Q Consensus 206 yD~~t~~~~W~~v~~~g~~P~~R-~~h~~~~~~~~~lyV~GG~~g~-~~~ndv~~yDl--~s~~~~W~~v~~~~~~P~~r 281 (975)
||+.+++ |+.+. ++|.+| .+|+++++++ +||||||.++. ...+++++||+ .++ +|+.+.+++. |. .
T Consensus 173 yd~~~~~--W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~-~~-~ 242 (357)
T 2uvk_A 173 FDPSTQQ--WSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSS-PD-G 242 (357)
T ss_dssp EETTTTE--EEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCSST-TT-C
T ss_pred EeCCCCc--EEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCC-Cc-c
Confidence 9999975 99997 778765 4599999988 89999998653 35789999987 778 9999988732 22 2
Q ss_pred ceeEEEEEeCCeEEEecCCCCC----------------CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCE
Q 002047 282 MYATASARSDGLLLLCGGRDAS----------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345 (975)
Q Consensus 282 ~~~~a~~~~~g~lyvfGG~~~~----------------~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~ 345 (975)
+..+++++.+++|||+||.+.. ...+++++.|++.++ +| ..+.. .|.+|..|+++.++++
T Consensus 243 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-~W--~~~~~-~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 243 VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-KW--DKSGE-LSQGRAYGVSLPWNNS 318 (357)
T ss_dssp CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----C--EEEEE-CSSCCBSSEEEEETTE
T ss_pred cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-ce--eeCCC-CCCCcccceeEEeCCE
Confidence 3445566679999999997432 223578889988765 44 45544 4789999999999999
Q ss_pred EEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 346 L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
|||+||.+..+. ..++|++|++++++|......
T Consensus 319 i~v~GG~~~~~~---~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 319 LLIIGGETAGGK---AVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEEEEECGGGC---EEEEEEEEEC-CCSCEEEC--
T ss_pred EEEEeeeCCCCC---EeeeEEEEEEcCcEeEeeecc
Confidence 999999876543 268999999999999988766
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-30 Score=284.72 Aligned_cols=202 Identities=20% Similarity=0.335 Sum_probs=160.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++|+||||||||+.+|.++|+.+++++..+ .+||||||||||++++|||.+|++| |.++++||||||.+.+
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d-----~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l 71 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKD-----TLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLL 71 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTC-----EEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCC-----EEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHH
Confidence 579999999999999999999999843322 7999999999999999999999987 3589999999999999
Q ss_pred hhhcCChHHHHHHhCCc-ccchhhhhhhccccccceEEEEcc-eEEEecCCccCcccCHhhhhhccCCccc---CCCCcc
Q 002047 778 NALFGFRIECIERMGER-DGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITM---EAGSIV 852 (975)
Q Consensus 778 ~~~~gf~~e~~~~~g~~-~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~---~~~~~~ 852 (975)
+..+||..+.....-.. .....+..+.++|+.||+++.+++ +++||||||+|.+ ++++++.+.|+++. ......
T Consensus 72 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~ 150 (280)
T 2dfj_A 72 AVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPF 150 (280)
T ss_dssp HHHTTSSCCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHH
T ss_pred hHhcCCcccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHH
Confidence 99998764211000000 001133456677888899988887 9999999999997 79999888877652 112235
Q ss_pred eeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH--HHHHHHcC-CeEEEEec-cccccceEEec
Q 002047 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV--MEFCNNND-LQLIVRAH-ECVMDGFERFA 914 (975)
Q Consensus 853 ~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~--~~fl~~~~-l~~iiR~H-~~~~~G~~~~~ 914 (975)
++++||+||. ..|.++.||.+.+.||.+++ .+||+.+| +++++|+| |.+++||+.++
T Consensus 151 ~~~~l~~d~~-----~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 151 FLDAMYGDMP-----NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp HHHHTTCSCC-----CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred HHHHhcCCCC-----CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 7899999996 36999999998778999984 66999999 99999999 88899998765
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=292.47 Aligned_cols=274 Identities=15% Similarity=0.098 Sum_probs=201.8
Q ss_pred CCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCC
Q 002047 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168 (975)
Q Consensus 89 P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~ 168 (975)
|.||.+|+++++.. +++||+|||........ .....+++++||+.+++|+.+..+
T Consensus 183 ~~P~~~~~~av~~~----------~g~l~v~GG~~~~~~~~---------------~~~~~~~~~~yd~~t~~w~~~~~~ 237 (656)
T 1k3i_A 183 DLPIVPAAAAIEPT----------SGRVLMWSSYRNDAFGG---------------SPGGITLTSSWDPSTGIVSDRTVT 237 (656)
T ss_dssp ECSSCCSEEEEETT----------TTEEEEEEECCCTTTCS---------------CCCSEEEEEEECTTTCCBCCCEEE
T ss_pred cCCCCceeEEEEec----------CCEEEEEeccccccccc---------------CCCCeEEEEEEeCCCCcEEeCccc
Confidence 56778888887731 58999999986432100 001345799999999999998776
Q ss_pred CCCCCCccceE--EEE-eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEc
Q 002047 169 GEPPTPRAAHV--ATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (975)
Q Consensus 169 g~~P~pR~~hs--a~~-~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~G 245 (975)
|.+|..|+ +++ .+++||++||... .++++||+.+++ |+.++ +||.+|+.|+++++.+++|||+|
T Consensus 238 ---~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~--W~~~~---~~~~~R~~~s~~~~~dg~iyv~G 304 (656)
T 1k3i_A 238 ---VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDS--WIPGP---DMQVARGYQSSATMSDGRVFTIG 304 (656)
T ss_dssp ---ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTE--EEECC---CCSSCCSSCEEEECTTSCEEEEC
T ss_pred ---CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCc--eeECC---CCCccccccceEEecCCeEEEEe
Confidence 56665553 444 4789999999743 379999999874 99987 89999999999999334899999
Q ss_pred C-CCCCCCCCcEEEEECCCCCcEEEEccC-----CCCC------------------------------------------
Q 002047 246 G-NDGKRPLADVWALDTAAKPYEWRKLEP-----EGEG------------------------------------------ 277 (975)
Q Consensus 246 G-~~g~~~~ndv~~yDl~s~~~~W~~v~~-----~~~~------------------------------------------ 277 (975)
| .++...++++++||+.++ +|+.+.. +...
T Consensus 305 G~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 305 GSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV 382 (656)
T ss_dssp CCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred CcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCccee
Confidence 9 566678899999999999 9999732 2111
Q ss_pred ------------CCCcceeEEEE--EeCCeEEEecCCCCC--CCCcc---ceEEeecCCCCeEEEEECCCCCCCCcceee
Q 002047 278 ------------PPPCMYATASA--RSDGLLLLCGGRDAS--SVPLA---SAYGLAKHRDGRWEWAIAPGVSPSPRYQHA 338 (975)
Q Consensus 278 ------------P~~r~~~~a~~--~~~g~lyvfGG~~~~--~~~l~---d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs 338 (975)
++++..++++. ..+++||++||.+.. ...++ .++.|++..+ .|.... .+.+|.+|..|+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~-~~~mp~~R~~~~ 460 (656)
T 1k3i_A 383 KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFA-SNGLYFARTFHT 460 (656)
T ss_dssp EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEEC-TTCCSSCCBSCE
T ss_pred ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEc-cCCCCCCcccCC
Confidence 11123344443 258999999997431 22344 5667766655 554433 144589999999
Q ss_pred EEEe-CCEEEEEcCcCCCCC--ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEE-
Q 002047 339 AVFV-NARLHVSGGALGGGR--MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV- 414 (975)
Q Consensus 339 ~v~~-~~~L~V~GG~~~~~~--~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~- 414 (975)
++++ +++|||+||.+.... ......++++||+++++|+.+..+ +.+|..|+++++
T Consensus 461 ~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~---------------------~~~R~~hs~a~ll 519 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLLL 519 (656)
T ss_dssp EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEEC
T ss_pred eEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC---------------------CCccccccHhhcC
Confidence 9888 999999999763210 113468899999999999998776 569999999988
Q ss_pred -CCEEEEEcCCC
Q 002047 415 -GDLIFIYGGLR 425 (975)
Q Consensus 415 -~~~LyV~GG~~ 425 (975)
+++|||+||..
T Consensus 520 ~dg~v~v~GG~~ 531 (656)
T 1k3i_A 520 PDGRVFNGGGGL 531 (656)
T ss_dssp TTSCEEEEECCC
T ss_pred CCcEEEecCCCC
Confidence 99999999953
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=291.04 Aligned_cols=232 Identities=16% Similarity=0.231 Sum_probs=190.9
Q ss_pred CCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE-e--cCCCCCCCcccEEEEe--CCcEEEEEc
Q 002047 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV-V--QGPGPGPRYGHVMALV--GQRYLMAIG 245 (975)
Q Consensus 171 ~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~-~--~g~~P~~R~~h~~~~~--~~~~lyV~G 245 (975)
.|.+|++|++ +++++|||+||.+. ...+++|+||+.+++ |+.++ . .+.+|.+|++|+++++ ++ +|||+|
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~G 458 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIG 458 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEEC
T ss_pred CCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCC-EEEEEc
Confidence 3666666544 48999999999866 668999999999975 99998 3 4679999999999999 66 899999
Q ss_pred CCCCCC-CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEE
Q 002047 246 GNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (975)
Q Consensus 246 G~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~ 324 (975)
|.++.. .++++|+||+.++ +|+.+.++ |.+|..|+++++.+++||||||.+... +++.|++.++ +|.
T Consensus 459 G~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~---~W~ 526 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE---IFK 526 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT---EEE
T ss_pred CCCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC---ceE
Confidence 998754 7999999999999 99999765 445777777665699999999987655 8999988876 555
Q ss_pred ECCC--CCCCCcceeeEEEeC---CEEEEEcCcCCCCCccccCCcEEEEECCCCe------EEEcccCcCCCCCCCCccc
Q 002047 325 IAPG--VSPSPRYQHAAVFVN---ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV------WCDTKSVVTSPRTGRYSAD 393 (975)
Q Consensus 325 ~~~g--~~P~~R~~hs~v~~~---~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~------W~~v~~~~~~p~~~~~~~~ 393 (975)
.+.. ..|.+|.+|++++++ ++|||+||....+. ...+++|+||+.+++ |+.+..++
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p----------- 593 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP----------- 593 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG-----------
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC-----------
Confidence 5553 468899999988877 89999999865432 347899999999999 88887641
Q ss_pred cCCCCCccCCCccceeEEEEEC-CEEEEEcCCCCC---CCccceEeeeccccc
Q 002047 394 AAGGDAAVELTRRCRHAAAAVG-DLIFIYGGLRGG---VLLDDLLVAEDLAAA 442 (975)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~~~~-~~LyV~GG~~~~---~~l~Dv~~ld~~~~~ 442 (975)
+.+|++|++++++ ++|||+||+++. ..+++++++|.....
T Consensus 594 ---------~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 594 ---------LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp ---------GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred ---------CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 3589999999999 999999998755 369999999987544
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=247.07 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=180.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCC-----CccccEEEEEcCCCCCcEEEEEecCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
++..||+.+++|+.+.++ ||..|+++++ +++||++||..... ....++++||+.+++ |+.+. .
T Consensus 167 ~~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~---~ 236 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRT---V 236 (656)
T ss_dssp CCCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCE---E
T ss_pred ccccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCc---c
Confidence 355678889999998754 4566677766 88999999975432 234589999999985 99887 6
Q ss_pred CCCCCcccE--EEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCC
Q 002047 224 GPGPRYGHV--MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 224 ~P~~R~~h~--~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
+|.+|..|+ ++++.+++|||+||.+.. ++++||+.++ +|+.+.++.. +|.+|++++..+++|||+||..
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~--~W~~~~~~~~---~R~~~s~~~~~dg~iyv~GG~~ 307 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD--SWIPGPDMQV---ARGYQSSATMSDGRVFTIGGSW 307 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT--EEEECCCCSS---CCSSCEEEECTTSCEEEECCCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC--ceeECCCCCc---cccccceEEecCCeEEEEeCcc
Confidence 677776654 555555589999998653 7999999999 9999986643 4666666666699999999964
Q ss_pred CCCCCccceEEeecCCCCeEEEEEC---CCCC------------------------------------------------
Q 002047 302 ASSVPLASAYGLAKHRDGRWEWAIA---PGVS------------------------------------------------ 330 (975)
Q Consensus 302 ~~~~~l~d~~~~~~~~~~~W~w~~~---~g~~------------------------------------------------ 330 (975)
.....+++++.|++.++ +|+.... .+++
T Consensus 308 ~~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 308 SGGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CSSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred cCCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 44447889999988766 4544311 1110
Q ss_pred --------CCCcceeeEEE---eCCEEEEEcCcCCCCCccccCC---cEEEEECCCCeEEEcc--cCcCCCCCCCCcccc
Q 002047 331 --------PSPRYQHAAVF---VNARLHVSGGALGGGRMVEDSS---SVAVLDTAAGVWCDTK--SVVTSPRTGRYSADA 394 (975)
Q Consensus 331 --------P~~R~~hs~v~---~~~~L~V~GG~~~~~~~~~~~~---dv~~yD~~t~~W~~v~--~~~~~p~~~~~~~~~ 394 (975)
+.++..++++. ++++|||+||...... ....+ .+++||+.+++|..+. .+
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~-~~~~~~~~~v~~yd~~~~~W~~~~~~~m------------- 452 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD-SDATTNAHIITLGEPGTSPNTVFASNGL------------- 452 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS-SBCCCCEEEEECCSTTSCCEEEECTTCC-------------
T ss_pred ccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC-CCcCCcceEEEcCCCCCCCeeEEccCCC-------------
Confidence 00122344443 4899999999753211 11234 7999999999999886 44
Q ss_pred CCCCCccCCCccceeEEEEE-CCEEEEEcCCCC------CCCccceEeeeccc
Q 002047 395 AGGDAAVELTRRCRHAAAAV-GDLIFIYGGLRG------GVLLDDLLVAEDLA 440 (975)
Q Consensus 395 ~~~~~~~~p~~R~~hsa~~~-~~~LyV~GG~~~------~~~l~Dv~~ld~~~ 440 (975)
|.+|..|+++++ +++|||+||.+. ...+++++++|...
T Consensus 453 --------p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 453 --------YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp --------SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred --------CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 669999999998 999999999653 35688999999754
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-23 Score=223.24 Aligned_cols=186 Identities=19% Similarity=0.321 Sum_probs=127.1
Q ss_pred HHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 002047 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (975)
Q Consensus 685 ~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~ 763 (975)
.+|.+++.++++.++|+|||||||++.+|.++|+.++.... + .+||+|||||||+++.|++.+|..+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 35788999999999999999999999999999999987653 3 7999999999999999999998864
Q ss_pred CEEEEeccccccchhhhcCChHH-HHHHhCCccc-----chhhhhhhccccccceEEEEc-ceEEEecCCccCccc----
Q 002047 764 NVHLIRGNHEAADINALFGFRIE-CIERMGERDG-----IWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSIN---- 832 (975)
Q Consensus 764 ~v~llrGNHE~~~~~~~~gf~~e-~~~~~g~~~~-----~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~~~---- 832 (975)
.+++|+||||...++..+++..+ +..+++.... ..+.....++|+.||+++.++ ++++|||||++|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999998888887654 3444443211 123455667888899998886 599999999988653
Q ss_pred CHhhhhhccCCcc---cCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHH
Q 002047 833 HVEQIENLQRPIT---MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (975)
Q Consensus 833 ~~~~i~~i~rp~~---~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (975)
..+++..+.+... .+..+ ..++|+||... ....|..+.||...++||+..
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~-~~~~w~~~~~g~~~vvfGHt~ 206 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETND-GGKPWASMWRGPETVVFGHDA 206 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTT-CCEEGGGGCCCSSEEEECCCG
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCc-CCCChhhccCCCCEEEECCCc
Confidence 2333333332211 11111 14789998532 244566666655544455443
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-20 Score=193.47 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=92.9
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++|+|||||||++.+|.++|+.++..+..+ .+||+|||||||+++.|++.+|.. ..+++|+||||...+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 689999999999999999999998753221 789999999999999999988754 379999999999887
Q ss_pred hhhcCChHH-HHHHhCCc-------ccchhhhhhhccccccceEEEE---cceEEEecCCccCc
Q 002047 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (975)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~~ 830 (975)
+..+++... .+...+.. ....++..+.++|+.||+++.+ +.+++|||||+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 655433211 11111211 1123456778899999999877 57999999999764
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-13 Score=145.67 Aligned_cols=188 Identities=19% Similarity=0.154 Sum_probs=125.8
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
.++|.+||||||++.+|.++++.+. ..+ .+|++||++|+|+++.|++.+|..++ .+++++||||...
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~ 69 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWAC 69 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHH
Confidence 3689999999999999999999987 222 79999999999999999999999884 3799999999987
Q ss_pred hhhhcC--Ch---HHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCc
Q 002047 777 INALFG--FR---IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSI 851 (975)
Q Consensus 777 ~~~~~g--f~---~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~ 851 (975)
...... +. .+.... ....+.....+++..||.....+ +++++||++....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~-------------------- 124 (246)
T 3rqz_A 70 IGRLSLDEFNPVARFASYW----TTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI-------------------- 124 (246)
T ss_dssp TCCCCCC--CGGGGCHHHH----HHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT--------------------
T ss_pred hccCCccccCHHHHHHHHH----HHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc--------------------
Confidence 653322 10 000000 01123345567788899987655 8999999864310
Q ss_pred ceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEE-------------------
Q 002047 852 VLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER------------------- 912 (975)
Q Consensus 852 ~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~------------------- 912 (975)
| . +.+....+.+.++..+.+++|-||.-.+.-+..
T Consensus 125 ------~----~----------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (246)
T 3rqz_A 125 ------W----E----------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLD 178 (246)
T ss_dssp ------T----C----------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEE
T ss_pred ------c----c----------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceee
Confidence 0 0 122345666777888999999999876544431
Q ss_pred -ecCCeEEEEeccccccCCCCCcEEEEEEcCC-ceEEeE
Q 002047 913 -FAQGHLITLFSATNYCGTANNAGAILVLGRD-LVVVPK 949 (975)
Q Consensus 913 -~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~-~~~~~~ 949 (975)
..+..+|..-|.-.-- ...+.+++++++.+ ..++++
T Consensus 179 l~~g~~ivNpGSVG~Pr-dg~p~A~Y~i~d~~~~~v~~~ 216 (246)
T 3rqz_A 179 VSSGRYIINPGAVGQPR-DGDPRASYAIFEPDAQRVTFH 216 (246)
T ss_dssp CSSSCEEEEECCSSCCC-SSCCSEEEEEEEGGGTEEEEE
T ss_pred cCCCeEEEECCccCCCC-CcCCcceEEEEECCCCEEEEE
Confidence 1134555655542221 13457788888654 344443
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3e-12 Score=137.32 Aligned_cols=199 Identities=11% Similarity=0.040 Sum_probs=121.0
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhC---CC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYG---SP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g---~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (975)
++|++||||||++..|.++++.+. .. ..+ .+|++||++|+|+.+.|++.+|..|+... .+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecch
Confidence 579999999999999999998775 32 122 68999999999999999999999987543 499999999
Q ss_pred cccchhhhcCCh-----------HHHHHHhCCcccchhhhhhhccccccceEEEE--cc-eEEEecCCccCcccCHhhhh
Q 002047 773 EAADINALFGFR-----------IECIERMGERDGIWAWHRINRLFNWLPLAALI--EK-KIICMHGGIGRSINHVEQIE 838 (975)
Q Consensus 773 E~~~~~~~~gf~-----------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~~-~il~vHgGi~~~~~~~~~i~ 838 (975)
|.........+. ......+ ......+-....+++..||....+ ++ +++++||++....
T Consensus 74 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~------- 145 (252)
T 1nnw_A 74 DQIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF------- 145 (252)
T ss_dssp HHHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT-------
T ss_pred HHHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc-------
Confidence 987654321110 0000000 000011223445677788876554 33 8999999872110
Q ss_pred hccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHc-CCeEEEEeccccccceEEecCCe
Q 002047 839 NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNN-DLQLIVRAHECVMDGFERFAQGH 917 (975)
Q Consensus 839 ~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~~~~~ 917 (975)
. +.+| + + -+.+.+.++++.. +.+++|-||.-+...... ++.
T Consensus 146 ----------~-----~~~~--~-----------~--------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~ 187 (252)
T 1nnw_A 146 ----------D-----GEVL--A-----------E--------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYG 187 (252)
T ss_dssp ----------T-----CCCC--S-----------S--------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTE
T ss_pred ----------c-----cccC--C-----------C--------CCHHHHHHHHhcCCCCCEEEECCccccceEec--CCe
Confidence 0 0011 0 0 1235677788887 999999999987655433 454
Q ss_pred E-EEEeccccccCCCCCcEEEEEEcC-CceEEeEEe
Q 002047 918 L-ITLFSATNYCGTANNAGAILVLGR-DLVVVPKLI 951 (975)
Q Consensus 918 ~-iTvfSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~ 951 (975)
+ |..=|. .+.-.....+++++++- +..+.++.+
T Consensus 188 ~~in~Gs~-~~~~~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 188 RVVCPGSV-GFPPGKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp EEEEECCS-SSCSSSSCCEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCc-cCCCCCCCcceEEEEECCCCeEEEEEe
Confidence 3 232222 11111122566666654 344554433
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-12 Score=140.58 Aligned_cols=118 Identities=16% Similarity=0.086 Sum_probs=86.1
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchh
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (975)
+|.||+||||++..|.++|+.+.....+ .+||+||+|++|+++.||+.+|.+++ .+++|+||||...++
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 81 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWH 81 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHH
Confidence 6899999999999999999988644333 79999999999999999999998872 589999999998776
Q ss_pred hhc---CChHHHHHHhC---CcccchhhhhhhccccccceEEEE--c-ceEEEecCCc
Q 002047 779 ALF---GFRIECIERMG---ERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGI 827 (975)
Q Consensus 779 ~~~---gf~~e~~~~~g---~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi 827 (975)
... +|.......+. ......+.....+++..||....+ + .+++++||-.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 82 GVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp HHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred hhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 433 33322111110 001122345667888999998755 3 4899999654
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.69 E-value=2.6e-08 Score=103.60 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.8
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCCEEEEe
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ--------HSLETITLLLALKVEYPNNVHLIR 769 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~--------~s~evl~ll~~lk~~~P~~v~llr 769 (975)
+++.+++|+||++..|.++++.+.....+ .+|++||++|+|+ ...+++.+|.+++ ..+++++
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~ 95 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVR 95 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEE
Confidence 68999999999999999998876422222 7899999999998 4688999888775 3699999
Q ss_pred ccccccc
Q 002047 770 GNHEAAD 776 (975)
Q Consensus 770 GNHE~~~ 776 (975)
||||...
T Consensus 96 GNHD~~~ 102 (208)
T 1su1_A 96 GNCDSEV 102 (208)
T ss_dssp CTTCCHH
T ss_pred CCCchHH
Confidence 9999854
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.66 E-value=2.4e-07 Score=94.91 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
+++.+++|+||++..|.++++.+.....+ .+|++||++|. +++.+|.++ +..+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 68999999999999999999887432222 68899999984 566666543 3469999999998654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=98.62 E-value=4.2e-07 Score=94.88 Aligned_cols=74 Identities=11% Similarity=0.118 Sum_probs=54.9
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
.++|.+++|+|+++..|.++++.+.....+ -+|++||++|+|....++..++-.|+.. +..+++++||||...
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchh
Confidence 468999999999999998888765321122 6889999999997666555555555432 345999999999864
Q ss_pred h
Q 002047 777 I 777 (975)
Q Consensus 777 ~ 777 (975)
.
T Consensus 78 ~ 78 (228)
T 1uf3_A 78 W 78 (228)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.4e-06 Score=87.75 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=43.4
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
+++.+++|+||++..|.++++.+.. ..+ .++++||+.- +++. .++ ..+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 5799999999999999999998853 222 6889999731 2222 221 2699999999974
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.39 E-value=5.7e-06 Score=86.27 Aligned_cols=120 Identities=22% Similarity=0.342 Sum_probs=79.5
Q ss_pred cCCEEEEecCCCCHH------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEec
Q 002047 697 KAPIKIFGDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrG 770 (975)
.++|.+++|+|+++. .|.++++. ...+ .+|++||++| .+++.+|..+. ..+++++|
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~---~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~G 86 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT---DKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSG 86 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC---TTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc---CCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecC
Confidence 468999999999863 33333331 1122 6899999998 58888877763 36999999
Q ss_pred cccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEE--c-ceEEEecCCccCcccCHhhhhhccCCcccC
Q 002047 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITME 847 (975)
Q Consensus 771 NHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (975)
|||....... .+++..||....+ + .+|+++||.... |
T Consensus 87 NHD~~~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~-------------~---- 126 (215)
T 2a22_A 87 DLDSAIFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVL-------------P---- 126 (215)
T ss_dssp TTCCSCCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTSS-------------S----
T ss_pred CCcCcccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCccC-------------C----
Confidence 9998654310 0123456644332 2 489999986511 0
Q ss_pred CCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccc
Q 002047 848 AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (975)
Q Consensus 848 ~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (975)
| .+.+.+.++++..+.+++|-||.-..
T Consensus 127 ----------~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 127 ----------W-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp ----------T-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred ----------C-----------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 0 13456777888889999999998764
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-07 Score=94.79 Aligned_cols=62 Identities=23% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCEEEEecCCC--CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHG--QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG--~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
++|.+++|+|| +...|.++++.+. ...+ .+|++||++|+ +++.+|..+. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 57999999997 7777888887753 2222 68999999984 7888887763 3699999999975
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-05 Score=82.42 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=44.0
Q ss_pred CCEEEEecCCCCHH--HHHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQFG--DLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~~--~L~~ll~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
++|.+++|+|++.. ++.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~ 75 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 75 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCc
Confidence 68999999999753 23333322 2211112 6888999997 67888877653 369999999997
Q ss_pred cc
Q 002047 775 AD 776 (975)
Q Consensus 775 ~~ 776 (975)
..
T Consensus 76 ~~ 77 (192)
T 1z2w_A 76 NL 77 (192)
T ss_dssp CT
T ss_pred cc
Confidence 54
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.22 E-value=3.4e-06 Score=86.45 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=48.6
Q ss_pred CCEEEEecCCCCHHHH-------------HHHHHHhCC--CCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC
Q 002047 698 APIKIFGDLHGQFGDL-------------MRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L-------------~~ll~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P 762 (975)
++|.+++|+|+....+ .++++.+.. ...+ .+|++||++++|+...+++.+|..+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~---- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP---- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----
Confidence 6799999999654332 223333221 1222 68899999999977778888887763
Q ss_pred CCEEEEeccccccc
Q 002047 763 NNVHLIRGNHEAAD 776 (975)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (975)
..+++++||||...
T Consensus 72 ~~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 72 GRKILVMGNHDKDK 85 (195)
T ss_dssp SEEEEECCTTCCCH
T ss_pred CCEEEEeCCCCCch
Confidence 35999999999854
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0001 Score=81.27 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=47.8
Q ss_pred cCCEEEEecCCC------------CHHHHHHHHHHhCC--CCCCCCccceeEEEeccccCCCCCh-H-HHHHHHHHhhhc
Q 002047 697 KAPIKIFGDLHG------------QFGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-L-ETITLLLALKVE 760 (975)
Q Consensus 697 ~~~i~vvGDiHG------------~~~~L~~ll~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~-evl~ll~~lk~~ 760 (975)
.++|++++|+|. ....|.++++.+.. ...+ -+|++||++|.|... . ++..+|..|...
T Consensus 25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 467999999996 26677777777642 2222 588899999998742 2 223333333222
Q ss_pred CCCCEEEEeccccc
Q 002047 761 YPNNVHLIRGNHEA 774 (975)
Q Consensus 761 ~P~~v~llrGNHE~ 774 (975)
..-.+++++||||.
T Consensus 99 ~~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 99 LGAELVWVMGNHDD 112 (330)
T ss_dssp HTCEEEECCCTTSC
T ss_pred cCCCEEEeCCCCCC
Confidence 23459999999997
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=97.94 E-value=4.6e-06 Score=89.04 Aligned_cols=74 Identities=8% Similarity=0.092 Sum_probs=52.7
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--------------------------HHH
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------------------------LET 750 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------------------------~ev 750 (975)
.++|.+++|||+++..|.++++.+.....+ -+|++||++|+|..+ .+.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 78 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 78 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHH
Confidence 368999999999999998888876322222 688999999999652 123
Q ss_pred HHHHHHhhhcCCCCEEEEeccccccch
Q 002047 751 ITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
..+|-.|+. .+..+++++||||....
T Consensus 79 ~~~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 79 DKFFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHHHh-cCCcEEEEcCCCCchhh
Confidence 344444443 23469999999998653
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0029 Score=68.67 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=43.2
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
++|++|+|+||+...| .++..+ -+|++||++|+|... .+++.+|..+. + ..++++.||||..
T Consensus 60 mri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 60 TRFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELT 123 (296)
T ss_dssp EEEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGG
T ss_pred eEEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCcccc
Confidence 5799999999998643 223322 688899999999742 22344443331 1 2489999999985
Q ss_pred c
Q 002047 776 D 776 (975)
Q Consensus 776 ~ 776 (975)
.
T Consensus 124 ~ 124 (296)
T 3rl5_A 124 F 124 (296)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00036 Score=74.59 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=46.8
Q ss_pred CCEEEEecCCCCH------------HHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcC
Q 002047 698 APIKIFGDLHGQF------------GDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEY 761 (975)
Q Consensus 698 ~~i~vvGDiHG~~------------~~L~~ll~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~ 761 (975)
++|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|.... ++..+|..|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l---- 70 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL---- 70 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----
Confidence 4689999999985 6788888776432 112 6889999999887421 222222222
Q ss_pred CCCEEEEecccccc
Q 002047 762 PNNVHLIRGNHEAA 775 (975)
Q Consensus 762 P~~v~llrGNHE~~ 775 (975)
+-.++.++||||..
T Consensus 71 ~~p~~~v~GNHD~~ 84 (274)
T 3d03_A 71 NYPLYLIPGNHDDK 84 (274)
T ss_dssp SSCEEEECCTTSCH
T ss_pred CCCEEEECCCCCCH
Confidence 33599999999984
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.043 Score=57.72 Aligned_cols=185 Identities=17% Similarity=0.106 Sum_probs=116.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||+-.|..+. +.+..+|+.+++-..-... |..-.+.+++..+++||+...
T Consensus 30 ~~~LyestG~~g~------------------------S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 30 RGHLYESTGETGR------------------------SSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TTEEEEEECCTTS------------------------CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe
Confidence 6899999996532 4788999999986665444 444566788889999999865
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
. .+.+++||..+.. .-.++ +.+-.+.+++.-++ .||+.=| .+.++.+|+.+.. .-..+.
T Consensus 83 ~------~~~v~v~D~~tl~-~~~ti------~~~~~Gwglt~dg~-~L~vSdg------s~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 83 R------NHEGFVYDLATLT-PRARF------RYPGEGWALTSDDS-HLYMSDG------TAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp S------SSEEEEEETTTTE-EEEEE------ECSSCCCEEEECSS-CEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred e------CCEEEEEECCcCc-EEEEE------eCCCCceEEeeCCC-EEEEECC------CCeEEEEeCCCCe-EEEEEE
Confidence 3 4789999998853 22233 23346777775554 7998644 3579999999872 122222
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCC--------cceeeEEEe--
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP--------RYQHAAVFV-- 342 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~--------R~~hs~v~~-- 342 (975)
.... +.+...--.....+++||+--- ..+++..+++.+...-.|..+.+..|.. -.--+.+..
T Consensus 142 V~~~-g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 142 VTAG-GRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EccC-CcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 2111 1111111223455889987532 2457888888776666788877543221 122334444
Q ss_pred CCEEEEEcCc
Q 002047 343 NARLHVSGGA 352 (975)
Q Consensus 343 ~~~L~V~GG~ 352 (975)
+++|||.|-.
T Consensus 215 ~~~lfVTGK~ 224 (243)
T 3mbr_X 215 HDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4789998753
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0004 Score=77.28 Aligned_cols=77 Identities=23% Similarity=0.294 Sum_probs=47.0
Q ss_pred Ceeee-cCCEEEEecCC-C----C-----------HHHHHHHHHHhCCCCCCCCccceeEEEecc-ccCCCCChHHH---
Q 002047 692 SVLQL-KAPIKIFGDLH-G----Q-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGD-YVDRGQHSLET--- 750 (975)
Q Consensus 692 ~~l~l-~~~i~vvGDiH-G----~-----------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGD-yVDRG~~s~ev--- 750 (975)
-++.. .++|+.++|+| | . ...|.++++.+.....+ -+|+.|| ++|++..+.+.
T Consensus 12 ~~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~ 85 (336)
T 2q8u_A 12 HVINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHD 85 (336)
T ss_dssp CCTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHH
T ss_pred hheecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHH
Confidence 34444 36899999999 8 3 34455666554321222 5888999 99999877664
Q ss_pred -HHHHHHhhhcCCCCEEEEeccccccc
Q 002047 751 -ITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 751 -l~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
..+|..|+.. -.|+++.||||...
T Consensus 86 ~~~~l~~L~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 86 LLDYLKRMMRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHHHHHHHHHH--SCEEECCC------
T ss_pred HHHHHHHHHhc--CCEEEECCCCCccc
Confidence 4555555433 35999999999865
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00037 Score=76.11 Aligned_cols=72 Identities=19% Similarity=0.172 Sum_probs=48.2
Q ss_pred CCEEEEecCCCCH-------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC----ChHHHHHHH
Q 002047 698 APIKIFGDLHGQF-------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ----HSLETITLL 754 (975)
Q Consensus 698 ~~i~vvGDiHG~~-------------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~----~s~evl~ll 754 (975)
.+|++++|+|... ..|.++++.+.....+ -+|++||+++.+. ...+.+..+
T Consensus 6 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~ 79 (322)
T 2nxf_A 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTV 79 (322)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHH
T ss_pred eEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHH
Confidence 4689999999876 5566666655322222 5889999999875 123444434
Q ss_pred HHhhhcCCCCEEEEecccccc
Q 002047 755 LALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 755 ~~lk~~~P~~v~llrGNHE~~ 775 (975)
+.+-...+..++++.||||..
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHH
T ss_pred HHHHHhcCCcEEEecCCCCcc
Confidence 333333445799999999985
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00079 Score=76.44 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=49.4
Q ss_pred cCCEEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHH----HHHHHHhhh
Q 002047 697 KAPIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET----ITLLLALKV 759 (975)
Q Consensus 697 ~~~i~vvGDiHG~~-------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev----l~ll~~lk~ 759 (975)
.++|++++|+|+.. ..|.++++.+.....+ -+|+.||++|++..+.+. +.+|..|+.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 36899999999762 3466777765432222 688899999999554433 344444432
Q ss_pred cCCCCEEEEeccccccc
Q 002047 760 EYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 760 ~~P~~v~llrGNHE~~~ 776 (975)
.+-.|+++.||||...
T Consensus 94 -~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 94 -NNIKVYIVAGNHEMPR 109 (386)
T ss_dssp -TTCEEEECCCGGGSCS
T ss_pred -cCCcEEEEcCCCCCCc
Confidence 2346999999999854
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0008 Score=74.73 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=46.5
Q ss_pred CCEEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHH----HHHHhhhc
Q 002047 698 APIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIT----LLLALKVE 760 (975)
Q Consensus 698 ~~i~vvGDiHG~~-------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~----ll~~lk~~ 760 (975)
+++++++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~- 73 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE- 73 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-
Confidence 4689999999874 3455555554322222 68889999999855544433 3334432
Q ss_pred CCCCEEEEecccccc
Q 002047 761 YPNNVHLIRGNHEAA 775 (975)
Q Consensus 761 ~P~~v~llrGNHE~~ 775 (975)
..-.|+++.||||..
T Consensus 74 ~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 74 HSIPVFAIEGNHDRT 88 (333)
T ss_dssp TTCCEEEECCTTTCC
T ss_pred CCCcEEEeCCcCCCc
Confidence 123599999999985
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.16 Score=55.57 Aligned_cols=182 Identities=11% Similarity=0.002 Sum_probs=100.2
Q ss_pred CcEEEEECCCCcEE-EecCCCCCCCCccceEEEE-eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEE-EEEecCCCC-
Q 002047 150 ADVHCYDVLTNKWS-RITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGP- 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~-~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~-~v~~~g~~P- 225 (975)
+.+.++|+.+.+-. .+... .. -+.++. -++++|+.... .+.++++|+.+.. -. .++ .+...
T Consensus 64 ~~v~viD~~t~~~~~~i~~~---~~---p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~--~~~~i~-~g~~~~ 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF---TS---PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYE--ITGYIE-CPDMDM 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC---SS---EEEEEEEETTEEEEEEBS------CSEEEEEETTTTE--EEEEEE-CTTCCT
T ss_pred CEEEEEECcccEEEEEcCCC---CC---CcEEEEeCCCeEEEEECC------CCeEEEEECCCCe--EEEEEE-cCCccc
Confidence 47889999988763 34221 22 233444 56799998743 3679999998864 22 232 22200
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
....-+.+++.+ ++|||..- ..-+.+.++|+.+. +....-..+..| +..+...++++|+.........
T Consensus 129 ~~~~p~~i~~~~-~~lyv~~~----~~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 129 ESGSTEQMVQYG-KYVYVNCW----SYQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTCBCCCEEEET-TEEEEEEC----TTCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTC
T ss_pred cCCCcceEEEEC-CEEEEEcC----CCCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCC
Confidence 000223444444 48999842 12357999999998 544332222222 2233345688888754321111
Q ss_pred C----ccceEEeecCCCCeEEE-EECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 306 P----LASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 306 ~----l~d~~~~~~~~~~~W~w-~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
. .+.++.++..+. +... ...+ ....-..+++. ++.||+..+ .+++||+++.+.
T Consensus 197 ~~~~~~~~v~~id~~t~-~v~~~~~~~----~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETF-TVEKQFKFK----LGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SSCBCCCEEEEEETTTT-EEEEEEECC----TTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred ccccCCceEEEEECCCC-eEEEEEecC----CCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 1 256788876544 3322 2221 12222445555 567888632 489999998864
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.25 Score=53.93 Aligned_cols=231 Identities=8% Similarity=-0.038 Sum_probs=126.2
Q ss_pred cCcEEEEECCCCcEEEecCC--CCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPF--GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~--g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.+..||+.++++..--.. ...+.....+.++..++++|+.... .+.+.++|+.+.. .-..++ ...
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~-~~~~i~---~~~- 84 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFK-EVGRIT---GFT- 84 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCC-EEEEEE---CCS-
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccE-EEEEcC---CCC-
Confidence 35788999999988653210 0113344456777788999998753 3679999999864 112332 112
Q ss_pred CCcccEEEE-eCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 227 PRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 227 ~R~~h~~~~-~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
.-+.+++ -++ ++||.... .+.++++|+.+....++. . .+........-..+++.++++|+..-.
T Consensus 85 --~p~~i~~~~~g-~lyv~~~~-----~~~v~~iD~~t~~~~~~i-~-~g~~~~~~~~p~~i~~~~~~lyv~~~~----- 149 (328)
T 3dsm_A 85 --SPRYIHFLSDE-KAYVTQIW-----DYRIFIINPKTYEITGYI-E-CPDMDMESGSTEQMVQYGKYVYVNCWS----- 149 (328)
T ss_dssp --SEEEEEEEETT-EEEEEEBS-----CSEEEEEETTTTEEEEEE-E-CTTCCTTTCBCCCEEEETTEEEEEECT-----
T ss_pred --CCcEEEEeCCC-eEEEEECC-----CCeEEEEECCCCeEEEEE-E-cCCccccCCCcceEEEECCEEEEEcCC-----
Confidence 2234444 455 89998643 368999999988333322 1 121000000111222378999998420
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCC-ccccCCcEEEEECCCCeEEEcccCcC
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-MVEDSSSVAVLDTAAGVWCDTKSVVT 383 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~-~~~~~~dv~~yD~~t~~W~~v~~~~~ 383 (975)
.-+.+..++..+. +..+....+..| +.+++. ++++|+......... .....+.|+++|+++.+....-..
T Consensus 150 ~~~~v~viD~~t~-~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-- 221 (328)
T 3dsm_A 150 YQNRILKIDTETD-KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-- 221 (328)
T ss_dssp TCCEEEEEETTTT-EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC--
T ss_pred CCCEEEEEECCCC-eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec--
Confidence 1235667766544 433332222222 233333 578888753221110 001136799999999986643322
Q ss_pred CCCCCCCccccCCCCCccCCCccceeEEEEE--CCEEEEEcCCCCCCCccceEeeeccc
Q 002047 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
+....-+.+++. +++||+..+ .++++|...
T Consensus 222 -------------------~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t 253 (328)
T 3dsm_A 222 -------------------KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEA 253 (328)
T ss_dssp -------------------CTTCCCEEEEECTTSCEEEEESS--------SEEEEETTC
T ss_pred -------------------CCCCCceeEEEecCCCEEEEEcc--------EEEEEECCC
Confidence 111223445554 568998754 688888653
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.96 Score=49.79 Aligned_cols=187 Identities=15% Similarity=0.170 Sum_probs=102.4
Q ss_pred cEEEEECCCC--cEEEecCCCCC----CCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCC
Q 002047 151 DVHCYDVLTN--KWSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (975)
Q Consensus 151 dv~~yD~~t~--~W~~l~~~g~~----P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~ 224 (975)
.+++||..++ .|+.-...... .......+.++.++.||+... ...++.||..+....|+.-..
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~---- 132 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------KAQVYALNTSDGTVAWQTKVA---- 132 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------TSEEEEEETTTCCEEEEEECS----
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------CCEEEEEECCCCCEEEEEeCC----
Confidence 6889998765 47765432100 012233445556778888643 247999999987667876431
Q ss_pred CCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC
Q 002047 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS 304 (975)
Q Consensus 225 P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~ 304 (975)
.. .....++.++ .+|+... -..++.||+.+....|+.-...... ........++.++.+|+. ..+
T Consensus 133 -~~-~~~~p~~~~~-~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~v~~g-~~~--- 197 (376)
T 3q7m_A 133 -GE-ALSRPVVSDG-LVLIHTS------NGQLQALNEADGAVKWTVNLDMPSL--SLRGESAPTTAFGAAVVG-GDN--- 197 (376)
T ss_dssp -SC-CCSCCEEETT-EEEEECT------TSEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEEC-CTT---
T ss_pred -Cc-eEcCCEEECC-EEEEEcC------CCeEEEEECCCCcEEEEEeCCCCce--eecCCCCcEEECCEEEEE-cCC---
Confidence 11 1222234455 6777543 2379999999887789875432210 011123334457777773 221
Q ss_pred CCccceEEeecCCCCeEEEEECCCCCCC----Cc---ceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCC--eE
Q 002047 305 VPLASAYGLAKHRDGRWEWAIAPGVSPS----PR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VW 375 (975)
Q Consensus 305 ~~l~d~~~~~~~~~~~W~w~~~~g~~P~----~R---~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W 375 (975)
..++.++.. +++-.|......+.. .| .....++.++.+|+.+. ...+++||++++ .|
T Consensus 198 ---g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~----------~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 198 ---GRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY----------NGNLTALDLRSGQIMW 263 (376)
T ss_dssp ---TEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECT----------TSCEEEEETTTCCEEE
T ss_pred ---CEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec----------CcEEEEEECCCCcEEe
Confidence 245666544 455556544322100 11 22344566888888642 234899999877 56
Q ss_pred EE
Q 002047 376 CD 377 (975)
Q Consensus 376 ~~ 377 (975)
..
T Consensus 264 ~~ 265 (376)
T 3q7m_A 264 KR 265 (376)
T ss_dssp EE
T ss_pred ec
Confidence 54
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.58 Score=51.60 Aligned_cols=177 Identities=13% Similarity=0.159 Sum_probs=103.0
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.||..+++ |+.-.... ....+...+.+..++.||+. .. ...++.||+.+....|+.-. ..|..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~g-~~------~g~l~~~d~~tG~~~w~~~~---~~~~~ 221 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVVG-GD------NGRVSAVLMEQGQMIWQQRI---SQATG 221 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEEC-CT------TTEEEEEETTTCCEEEEEEC---CC---
T ss_pred CeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEEE-cC------CCEEEEEECCCCcEEEEEec---ccCCC
Confidence 469999998775 88754321 01112223444557777663 21 24699999988766787653 11211
Q ss_pred C--------cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecC
Q 002047 228 R--------YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (975)
Q Consensus 228 R--------~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG 299 (975)
. .....++.++ .+|+.+. -..+++||+.+....|+.-.. ........++.+|+...
T Consensus 222 ~~~~~~~~~~~~~p~~~~~-~v~~~~~------~g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNG-VVFALAY------NGNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp --------CCCCCCEEETT-EEEEECT------TSCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEET
T ss_pred CcccccccccCCCcEEECC-EEEEEec------CcEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEcC
Confidence 1 1123334454 7777642 236899999988778986421 12335566889998753
Q ss_pred CCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 300 ~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
-..++.++.. +++-.|..... ..+...+.++.++.||+... ...+++||+++++
T Consensus 286 -------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 286 -------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGR 339 (376)
T ss_dssp -------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCC
T ss_pred -------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCc
Confidence 1246777654 45556665421 12233445667888887531 2359999999885
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.98 Score=47.33 Aligned_cols=207 Identities=17% Similarity=0.093 Sum_probs=124.6
Q ss_pred ceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcE
Q 002047 177 AHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (975)
Q Consensus 177 ~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv 256 (975)
-++....++.+|+..|..+ .+.+.++|+.+.. -..-. ++|..-++.+++..++ +||+.... -+.+
T Consensus 23 tqGL~~~~~~LyestG~~g----~S~v~~vD~~tgk--v~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~-----~~~v 87 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG----RSSVRKVDLETGR--ILQRA---EVPPPYFGAGIVAWRD-RLIQLTWR-----NHEG 87 (243)
T ss_dssp EEEEEEETTEEEEEECCTT----SCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESS-----SSEE
T ss_pred cccEEEECCEEEEECCCCC----CceEEEEECCCCC--EEEEE---eCCCCcceeEEEEeCC-EEEEEEee-----CCEE
Confidence 3467777889999988632 3579999999874 32222 4566667888888887 89998644 3689
Q ss_pred EEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCc-c
Q 002047 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (975)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R-~ 335 (975)
++||+.+. +-..--+.+ ...-+++..+++||+.-| .+.++.+|+.+...-.-+.+... +.+. .
T Consensus 88 ~v~D~~tl--~~~~ti~~~------~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~-g~~~~~ 151 (243)
T 3mbr_X 88 FVYDLATL--TPRARFRYP------GEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG-GRPLDN 151 (243)
T ss_dssp EEEETTTT--EEEEEEECS------SCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEEECCcC--cEEEEEeCC------CCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC-Cccccc
Confidence 99999887 433221211 122455566788999755 23577777766544444444321 2221 1
Q ss_pred eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---EEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEE
Q 002047 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAA 412 (975)
Q Consensus 336 ~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~---W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~ 412 (975)
---+...+++||+--- ..++|.+.|+++++ |..+..+.... .. ...+..-.--+.+
T Consensus 152 lNeLe~~~G~lyanvw---------~s~~I~vIDp~tG~V~~~idl~~l~~~~--~~----------~~~~~~~vlNGIA 210 (243)
T 3mbr_X 152 LNELEWVNGELLANVW---------LTSRIARIDPASGKVVAWIDLQALVPDA--DA----------LTDSTNDVLNGIA 210 (243)
T ss_dssp EEEEEEETTEEEEEET---------TTTEEEEECTTTCBEEEEEECGGGSTTT--TS----------CCCTTSSCEEEEE
T ss_pred ceeeEEeCCEEEEEEC---------CCCeEEEEECCCCCEEEEEECCcCcccc--cc----------ccCCcCCceEEEE
Confidence 1224456888886421 25679999999985 44444331110 00 0001122334555
Q ss_pred EE--CCEEEEEcCCCCCCCccceEeeeccc
Q 002047 413 AV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 413 ~~--~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
.. +++|||.|= ++..+|.+.+.+
T Consensus 211 ~d~~~~~lfVTGK-----~wp~~~~v~~~~ 235 (243)
T 3mbr_X 211 FDAEHDRLFVTGK-----RWPMLYEIRLTP 235 (243)
T ss_dssp EETTTTEEEEEET-----TCSEEEEEEECC
T ss_pred EcCCCCEEEEECC-----CCCcEEEEEEec
Confidence 55 679999984 678888877765
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.11 Score=55.19 Aligned_cols=184 Identities=12% Similarity=0.016 Sum_probs=113.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||+-.|..+ .+.+..+|+.+++-..-... +..-.+.+++..+++||+.-.
T Consensus 52 ~~~LyestG~~g------------------------~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 52 NGYFYESTGLNG------------------------RSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp TTEEEEEEEETT------------------------EEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCC------------------------CceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe
Confidence 578999988543 23788999999876554444 333455678888999999955
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
. .+.+++||+.+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 105 ~------~~~v~v~D~~t~~-~~~ti~------~~~eG~glt~dg~-~L~~SdG------s~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 105 K------NGLGFVWNIRNLR-QVRSFN------YDGEGWGLTHNDQ-YLIMSDG------TPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp S------SSEEEEEETTTCC-EEEEEE------CSSCCCCEEECSS-CEEECCS------SSEEEEECTTTCS-EEEEEE
T ss_pred e------CCEEEEEECccCc-EEEEEE------CCCCceEEecCCC-EEEEECC------CCeEEEEcCCCCe-EEEEEE
Confidence 3 4689999999864 233333 2236667765444 7888643 3579999999872 223332
Q ss_pred CCCC-CCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCC-------CcceeeEEEe--
Q 002047 273 PEGE-GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS-------PRYQHAAVFV-- 342 (975)
Q Consensus 273 ~~~~-~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~-------~R~~hs~v~~-- 342 (975)
.... .|..... .....+++||+--- ..+.+..+|+.+...-.|+...+..|. .-.-.+.+..
T Consensus 164 V~~~g~~~~~lN--ELe~~~G~lyan~w------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 164 VTAHGEELPELN--ELEWVDGEIFANVW------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp CEETTEECCCEE--EEEEETTEEEEEET------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred eccCCccccccc--eeEEECCEEEEEEc------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 2111 0111111 12334889987422 245788888877666677887754321 1122445554
Q ss_pred CCEEEEEcCc
Q 002047 343 NARLHVSGGA 352 (975)
Q Consensus 343 ~~~L~V~GG~ 352 (975)
.++|||.|-.
T Consensus 236 ~~~lfVTGK~ 245 (262)
T 3nol_A 236 HHRLFVTGKL 245 (262)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4689998753
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0028 Score=73.09 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=46.8
Q ss_pred CCEEEEecCCCC--------------------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HH
Q 002047 698 APIKIFGDLHGQ--------------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LE 749 (975)
Q Consensus 698 ~~i~vvGDiHG~--------------------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~e 749 (975)
.+|++++|+|.. ...|.++++.+.....+ -+|++||+++.|... .+
T Consensus 40 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~ 113 (443)
T 2xmo_A 40 LSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTD------VLIISGDLTNNGEKTSHEE 113 (443)
T ss_dssp EEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCS------EEEEESCCBSSCCHHHHHH
T ss_pred eEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCHHHHHH
Confidence 478999999974 34556666554211112 688899999988643 33
Q ss_pred HHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 750 TITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 750 vl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
+..+|..|+. .+-.++.++||||...
T Consensus 114 ~~~~l~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 114 LAKKLTQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHHHHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHHHHHHh-CCCeEEEECCcCCCCC
Confidence 3344444431 2346999999999853
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.13 Score=54.63 Aligned_cols=181 Identities=7% Similarity=-0.069 Sum_probs=108.3
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||+-.|.. ..+..+|+.+++-..-. . +..-.+.+++..+++||+...
T Consensus 64 ~~~Ly~stG~~--------------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 64 QGHFFESTGHQ--------------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp TTEEEEEETTT--------------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEES
T ss_pred CCEEEEEcCCC--------------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEc
Confidence 68999999953 23888999887643332 3 233345678888999999855
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 114 ~------~~~v~V~D~~Tl~-~~~ti~------~~~eGwGLt~Dg~-~L~vSdG------s~~l~~iDp~T~~-v~~~I~ 172 (268)
T 3nok_A 114 T------EGLLFTWSGMPPQ-RERTTR------YSGEGWGLCYWNG-KLVRSDG------GTMLTFHEPDGFA-LVGAVQ 172 (268)
T ss_dssp S------SCEEEEEETTTTE-EEEEEE------CSSCCCCEEEETT-EEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred c------CCEEEEEECCcCc-EEEEEe------CCCceeEEecCCC-EEEEECC------CCEEEEEcCCCCe-EEEEEE
Confidence 3 4689999999863 223333 2335677776665 8999754 3589999999872 222222
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCC--------CCcceeeEEEe--
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP--------SPRYQHAAVFV-- 342 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P--------~~R~~hs~v~~-- 342 (975)
.... +.+...--...+.+|+||+--- ..+++..+|+.+...-.|+...+..| ..-.--+.+..
T Consensus 173 V~~~-g~~v~~lNeLe~~dG~lyanvw------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 173 VKLR-GQPVELINELECANGVIYANIW------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred eCCC-CcccccccccEEeCCEEEEEEC------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 2111 1111111223345889886421 24578888887665567777763211 11122334444
Q ss_pred CCEEEEEcC
Q 002047 343 NARLHVSGG 351 (975)
Q Consensus 343 ~~~L~V~GG 351 (975)
+++|||.|-
T Consensus 246 ~~rlfVTGK 254 (268)
T 3nok_A 246 SGRIFMTGK 254 (268)
T ss_dssp TCCEEEEET
T ss_pred CCEEEEeCC
Confidence 468888874
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=1.3 Score=47.21 Aligned_cols=185 Identities=10% Similarity=0.032 Sum_probs=107.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
+.+..+|+.+++-..-.+. +......+.+..+++||+..-. .+.+++||..+.. .-..++ .+ +| .
T Consensus 44 s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~-v~~~i~-~g-~~---~ 108 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS-NIKNFT-HQ-MK---D 108 (266)
T ss_dssp CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE-EEEEEE-CC-SS---S
T ss_pred CEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc-EEEEEE-CC-CC---C
Confidence 4799999999886554433 2333456778888899998643 4689999998753 122232 12 22 3
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
+.+.+. +++++|+.-| .+.++.+|+.+.. .-..+..... +.+...--...+.++++|+--. ..++
T Consensus 109 g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~-v~~~I~Vg~~-~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 109 GWGLAT-DGKILYGSDG------TSILYEIDPHTFK-LIKKHNVKYN-GHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp CCEEEE-CSSSEEEECS------SSEEEEECTTTCC-EEEEEECEET-TEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred eEEEEE-CCCEEEEECC------CCeEEEEECCCCc-EEEEEEECCC-CcccccceeEEEECCEEEEecC------CCCe
Confidence 444544 4457998643 4689999998872 1222222111 1111111122233888987632 2357
Q ss_pred eEEeecCCCCeEEEEECCCCC--------CCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCC
Q 002047 310 AYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~--------P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~ 373 (975)
+..+++.+...-.|+.+.+.. +..-.-.+.++. ++++||.|+. .+.|++.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---------~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---------WPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---------CSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---------CCeEEEEEEecc
Confidence 888888776555677665321 111122445555 4689999875 345777776543
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.27 Score=59.70 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=66.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCC-----CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.||..+++ |+.-........ .....+.++.+++||+... ...++.+|..+....|+.-....
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~ 159 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEG 159 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcC
Confidence 368999998765 887543210000 0112345567788888643 35799999998876798643101
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 160 ~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 160 QKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred cCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 0011112223334555 677754322222346799999999887897754
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0028 Score=71.70 Aligned_cols=70 Identities=20% Similarity=0.223 Sum_probs=46.5
Q ss_pred CCEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEecccc-CCCCChHHHH----HHHHH
Q 002047 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQHSLETI----TLLLA 756 (975)
Q Consensus 698 ~~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyV-DRG~~s~evl----~ll~~ 756 (975)
++|+.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~ 74 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKR 74 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHH
Confidence 57899999997554 455555543221222 588899999 9887776544 34444
Q ss_pred hhhcCCCCEEEEecccccc
Q 002047 757 LKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 757 lk~~~P~~v~llrGNHE~~ 775 (975)
|+.. -.|+++.||||..
T Consensus 75 l~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 75 MMRT--APVVVLPGNQDWK 91 (379)
T ss_dssp HHHH--SCEEECCCTTSCT
T ss_pred HHhC--CCEEEEcCCCccc
Confidence 4433 4699999999953
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.9 Score=50.66 Aligned_cols=188 Identities=14% Similarity=0.059 Sum_probs=93.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+++||+.+.+.......+........-..+.+ ++.+|+.|+. ...+++||+.+... ...+. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~-~~~~~-----~~~~ 212 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAY-KATVD-----LTGK 212 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCE-EEEEE-----CSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceE-EEEEc-----CCCC
Confidence 589999998887765332110111111122233 5688888764 35799999987641 22222 1111
Q ss_pred cccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC-
Q 002047 229 YGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP- 306 (975)
Q Consensus 229 ~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~- 306 (975)
.-.+++.. +++.+|+.++.++ .+++||+.+. +....-.... .....+...+++.+++++.......
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDKIG-----LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCCCS-----EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecCCC-----CceEEEEcCCCCEEEEEECCCCcccc
Confidence 22233333 3446777765543 7999999887 5544322211 1222333345655555554332211
Q ss_pred -ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 307 -LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 307 -l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
-..++.++.... ........ +..-..+++. +..+|+.++. ...+.+||+.+.+-..
T Consensus 281 ~dg~i~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 281 GGGRLGIYSMDKE-KLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQK 339 (433)
T ss_dssp CCEEEEEEETTTT-EEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCC-cEEeeccC-----CCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEEE
Confidence 234555554433 22222110 1111123332 3368887654 2358999999876443
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0062 Score=69.97 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 002047 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (975)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (975)
++|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 77 mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 77 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHHH
T ss_pred eEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 468999999964 33566676665432222 688999999999999887765443
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0071 Score=69.13 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=37.8
Q ss_pred CCEEEEecCCCCH------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHh
Q 002047 698 APIKIFGDLHGQF------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL 757 (975)
Q Consensus 698 ~~i~vvGDiHG~~------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~l 757 (975)
++|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~ 98 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLEL 98 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHH
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHH
Confidence 5799999999532 3556666554332222 6889999999999888877655554
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=95.80 E-value=2.2 Score=45.09 Aligned_cols=206 Identities=8% Similarity=0.044 Sum_probs=120.1
Q ss_pred eEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEE
Q 002047 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (975)
Q Consensus 178 hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~ 257 (975)
.+....++.+|+..|..+ .+.+.++|+.+.. .-.++ +++..-++.+++..++ +||+.... -+.++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgk-v~~~~----~l~~~~FgeGit~~g~-~ly~ltw~-----~~~v~ 110 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGK-TLQQI----ELGKRYFGEGISDWKD-KIVGLTWK-----NGLGF 110 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCC-EEEEE----ECCTTCCEEEEEEETT-EEEEEESS-----SSEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCc-EEEEE----ecCCccceeEEEEeCC-EEEEEEee-----CCEEE
Confidence 455555789999988632 3578999999874 22233 3455556777777777 89998653 36899
Q ss_pred EEECCCCCcEEE-EccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-CCCCcc
Q 002047 258 ALDTAAKPYEWR-KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRY 335 (975)
Q Consensus 258 ~yDl~s~~~~W~-~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-~P~~R~ 335 (975)
+||+.+. +-. .+...+ ..-+++..+++||+.-| .+.++.+|+.+...-.-+.+... .|....
T Consensus 111 v~D~~t~--~~~~ti~~~~-------eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 111 VWNIRNL--RQVRSFNYDG-------EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp EEETTTC--CEEEEEECSS-------CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred EEECccC--cEEEEEECCC-------CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 9999887 322 222211 22345566778888754 13577787776544444444311 111111
Q ss_pred eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcC-CCCCCCCccccCCCCCccCCCccceeEEEEE
Q 002047 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (975)
Q Consensus 336 ~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (975)
. -+...+++||+-- ...+.|.+.|+++++=...-.+.. .+... ...+..-.-.+.|..
T Consensus 175 N-ELe~~~G~lyan~---------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-----------~~~~~~~vlNGIA~d 233 (262)
T 3nol_A 175 N-ELEWVDGEIFANV---------WQTNKIVRIDPETGKVTGIIDLNGILAEAG-----------PLPSPIDVLNGIAWD 233 (262)
T ss_dssp E-EEEEETTEEEEEE---------TTSSEEEEECTTTCBEEEEEECTTGGGGSC-----------SCCSSCCCEEEEEEE
T ss_pred c-eeEEECCEEEEEE---------ccCCeEEEEECCCCcEEEEEECCcCccccc-----------cccCcCCceEEEEEc
Confidence 1 2445588988631 125679999999986443332210 00000 000112233566665
Q ss_pred --CCEEEEEcCCCCCCCccceEeeeccc
Q 002047 415 --GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 415 --~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
+++|||.|- ++..+|.+.+.+
T Consensus 234 p~~~~lfVTGK-----~Wp~~~ev~~~~ 256 (262)
T 3nol_A 234 KEHHRLFVTGK-----LWPKVFEITLTQ 256 (262)
T ss_dssp TTTTEEEEEET-----TCSEEEEEEEEE
T ss_pred CCCCEEEEECC-----CCCceEEEEEec
Confidence 579999984 577788777655
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0094 Score=67.81 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=38.3
Q ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 002047 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (975)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (975)
++++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 579999999975 34566677665432222 688999999999999887765443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=2.4 Score=45.04 Aligned_cols=209 Identities=11% Similarity=0.021 Sum_probs=117.6
Q ss_pred eEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcE
Q 002047 178 HVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (975)
Q Consensus 178 hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv 256 (975)
|+++..+ +.+|+..|.. ..+.+.++|+.+.. -..-- +++....+.+++..++ +||+..-. -+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg~--v~~~i---~l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v 88 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTGK--VENIH---KMDDSYFGEGLTLLNE-KLYQVVWL-----KNIG 88 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEETT-----CSEE
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCCC--EEEEE---ecCCCcceEEEEEeCC-EEEEEEec-----CCEE
Confidence 6666666 6999987742 13679999999874 22222 2344445667777766 89998543 3689
Q ss_pred EEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-CCCCcc
Q 002047 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRY 335 (975)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-~P~~R~ 335 (975)
++||+.+. +=..--+.+ .| ...+.+..++++|+.-| .+.++.+++.+...-.-+.+... .|..+-
T Consensus 89 ~viD~~t~--~v~~~i~~g-~~----~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 89 FIYDRRTL--SNIKNFTHQ-MK----DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp EEEETTTT--EEEEEEECC-SS----SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEECCCC--cEEEEEECC-CC----CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 99999887 322211111 11 12335556788998754 24577777766543333343321 111121
Q ss_pred eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---EEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEE
Q 002047 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAA 412 (975)
Q Consensus 336 ~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~---W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~ 412 (975)
..+...++++|+--. ..+.|.+.|+++++ |..+..+.... . ....+..-.-.+.+
T Consensus 155 -nele~~dg~lyvn~~---------~~~~V~vID~~tg~V~~~I~~~g~~~~~--------~----~~~~~~~~v~nGIa 212 (266)
T 2iwa_A 155 -NELEYINGEVWANIW---------QTDCIARISAKDGTLLGWILLPNLRKKL--------I----DEGFRDIDVLNGIA 212 (266)
T ss_dssp -EEEEEETTEEEEEET---------TSSEEEEEETTTCCEEEEEECHHHHHHH--------H----HTTCTTCCCEEEEE
T ss_pred -eeEEEECCEEEEecC---------CCCeEEEEECCCCcEEEEEECCCccccc--------c----cccccccCceEEEE
Confidence 233444888887522 15679999999985 43333210000 0 00000011225555
Q ss_pred EE--CCEEEEEcCCCCCCCccceEeeeccccc
Q 002047 413 AV--GDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (975)
Q Consensus 413 ~~--~~~LyV~GG~~~~~~l~Dv~~ld~~~~~ 442 (975)
.. ++++||.|+. .+.++.+++....
T Consensus 213 ~~~~~~~lfVTgk~-----~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 213 WDQENKRIFVTGKL-----WPKLFEIKLHLVR 239 (266)
T ss_dssp EETTTTEEEEEETT-----CSEEEEEEEEECC
T ss_pred EcCCCCEEEEECCC-----CCeEEEEEEeccc
Confidence 55 5699999985 4677777776643
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.76 Score=54.55 Aligned_cols=114 Identities=12% Similarity=0.143 Sum_probs=65.1
Q ss_pred CcEEEEEC-CCC--cEEEecCCCCCCC--C---ccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec
Q 002047 150 ADVHCYDV-LTN--KWSRITPFGEPPT--P---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 150 ~dv~~yD~-~t~--~W~~l~~~g~~P~--p---R~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
..+++||. .++ .|+.-........ . ....+.++.+++||+... ...++.+|..+....|+.-...
T Consensus 73 ~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~ 145 (571)
T 2ad6_A 73 NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCD 145 (571)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC
T ss_pred CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCC
Confidence 36899998 765 4887533210000 0 112345567888888743 2469999998877679864311
Q ss_pred CCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 222 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 222 g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 146 -~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 146 -PKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp -GGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred -CCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 0000011222334565 777754321111235799999999888897643
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=95.17 E-value=1.6 Score=49.18 Aligned_cols=190 Identities=13% Similarity=0.028 Sum_probs=95.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..++.+|+....-..+... ... -.+.+.. +++.+++++.... ...++++|+.+.. ...+. ..+ .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----~~~-v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~--~~~l~---~~~--~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----PQP-LMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGA--VRQVA---SFP--R 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----SSC-EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC--EEEEE---CCS--S
T ss_pred ceEEEEcCCCCCCEEEeCC----CCc-ceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCc--EEEee---cCC--C
Confidence 5789999887655555322 111 1122222 4455555553221 2589999998864 55444 111 1
Q ss_pred cccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 229 YGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 229 ~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
.-.+.+.- ++++|++.+..++ ...+|.+|+.+. +...+..... .........+++.+++++.... .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~l~~~s~~~g---~ 290 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS-----NNTEPTWFPDSQNLAFTSDQAG---R 290 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCCSS-----CEEEEEECTTSSEEEEEECTTS---S
T ss_pred cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCCCC-----cccceEECCCCCEEEEEECCCC---C
Confidence 12223233 3334655554443 247999999988 6666544321 1222233346665555543211 2
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
..+|.++.... .. ..... ......+.++. +++.+++++.... ...|+++|+.+.+...+.
T Consensus 291 ~~i~~~d~~~~-~~--~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 291 PQVYKVNINGG-AP--QRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp CEEEEEETTSS-CC--EECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECC
T ss_pred cEEEEEECCCC-CE--EEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEec
Confidence 35666655433 11 12211 11222223332 4555555554321 246999999999886554
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=94.95 E-value=2 Score=47.08 Aligned_cols=178 Identities=17% Similarity=0.172 Sum_probs=91.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
+.+++||+.+++-...-... ..-++++.. +..||+.|+. ...+.+||+.+.. ....... +
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~--~~~~~~~---~-- 73 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN--VIATVPA---G-- 73 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE--EEEEEEC---S--
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCC------CCeEEEEECCCCe--EEEEEEC---C--
Confidence 47889999887655443221 112333333 3367777754 3579999998763 3222211 1
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eEEEecCCCCCCC
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSV 305 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~lyvfGG~~~~~~ 305 (975)
..-.+++.. +++.||+.|..+ ..+++||+.+. +....-.... .....+...++ .+|+.++.++
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~--- 138 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGDK--- 138 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECSS-----SEEEEEECTTSSEEEEEETTTT---
T ss_pred CCccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCCC-----CcceEEECCCCCEEEEEeCCCC---
Confidence 122333333 344577765443 46999999988 4443322222 11222233344 5667765432
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.++... ++..+....+. .-..+++. +..||+.++. ...|++||+.+.+....
T Consensus 139 ---~v~~~d~~~-~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 139 ---TVSVINTVT-KAVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp ---EEEEEETTT-TEEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred ---EEEEEECCC-CcEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEEE
Confidence 455555443 33333322221 11333333 3467777653 23489999998865543
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=94.75 E-value=1.9 Score=47.11 Aligned_cols=178 Identities=16% Similarity=0.123 Sum_probs=89.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.||+.+++....-..+ . .-.+++.. ++.||+.|.. ...+++||+.+.. ....... .
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~--~~~~~~~-----~ 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNT--VAGTVKT-----G 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEEC-----S
T ss_pred CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCe--EEEEEeC-----C
Confidence 47889999888765543331 1 22233333 3356666543 3579999998863 3222211 1
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eEEEecCCCCCCC
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSV 305 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~lyvfGG~~~~~~ 305 (975)
..-..++.. +++.||+.++.+ +.+++||+.+. +....-..... . ...+...++ .+|+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~--~~~~~~~~~~~----~-~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTK--AVINTVSVGRS----P-KGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECCSS----E-EEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCC--cEEEEEecCCC----c-ceEEECCCCCEEEEEeCCC----
Confidence 122333333 334677777544 37999999888 55444332221 1 222223334 666766543
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
..++.++.... ........ ...-.++++. ++ .||+.+ ... ....|.+||+.+.+-.
T Consensus 180 --~~v~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~-~~~------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 180 --MSISVIDTVTN-SVIDTVKV-----EAAPSGIAVNPEGTKAYVTN-VDK------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEEC-----SSEEEEEEECTTSSEEEEEE-ECS------SCCEEEEEETTTTEEE
T ss_pred --CEEEEEECCCC-eEEEEEec-----CCCccceEECCCCCEEEEEe-cCc------CCCcEEEEECCCCeEE
Confidence 23555554433 22211111 1112223333 34 455543 211 1355999999988643
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=1.8 Score=51.69 Aligned_cols=114 Identities=8% Similarity=0.033 Sum_probs=62.9
Q ss_pred CcEEEEEC-CCC--cEEEecCCCCC--CCCc---cceEEEE--eCCE----EEEEeccCCCCCccccEEEEEcCCCCCcE
Q 002047 150 ADVHCYDV-LTN--KWSRITPFGEP--PTPR---AAHVATA--VGTM----VVIQGGIGPAGLSAEDLHVLDLTQQRPRW 215 (975)
Q Consensus 150 ~dv~~yD~-~t~--~W~~l~~~g~~--P~pR---~~hsa~~--~~~~----iyv~GG~~~~~~~~~dv~~yD~~t~~~~W 215 (975)
+.+++||. .+. .|+.-...... +..+ ...+.++ .+++ ||+... ...++.+|..+....|
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W 145 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAALNAETGETVW 145 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEEECCCCCEEE
Confidence 36889999 766 48875432100 0011 1223444 5666 777532 2479999998887679
Q ss_pred EEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 216 HRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 216 ~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
+.-... .........+-++.++ .||+..+......-..++.||..+....|+.-.
T Consensus 146 ~~~~~~-~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 146 KVENSD-IKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEECCC-GGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred eecCCC-CCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 864311 0000011222344565 677643321112345799999999887887653
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.63 E-value=4.7 Score=48.80 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=65.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCC--C---CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPP--T---PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P--~---pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.+|..+++ |+.-....... . .....+.++.+++||+... ...++.+|..+....|+.-....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCC
Confidence 368999998764 88643321000 0 0112234566788887642 35799999998876798754201
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.........+-++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 153 ~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 1111112223345565 67764332111234579999999988789864
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=94.58 E-value=5.2 Score=42.29 Aligned_cols=182 Identities=10% Similarity=0.108 Sum_probs=95.1
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
+.++.+|..+++ |+.-... ....|.+.+. ++.+|+.+ .+.++.||+ +....|+.-. +.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~~ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----PA 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----CT
T ss_pred CEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----CC
Confidence 478899987765 7654321 1123444444 55777732 246999999 4444676543 21
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCC-CCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~-~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
...-+++....++.+++....+ ...++.+|+. ....|+.-..... .+. ...+.+....++.+++....
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~-Gk~l~~~~~~~~~~~~~-~~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH----PSTILEVNMK-GEVLSKTEFETGIERPH-AQFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST----TEEEEEECTT-SCEEEEEEECCSCSSGG-GSCSCCEECTTSCEEEEETT-----
T ss_pred CccccccEECCCCCEEEEecCC----CCEEEEEeCC-CCEEEEEeccCCCCccc-ccccCceECCCCCEEEEecC-----
Confidence 2233455555555566654321 2368888874 4345654322111 110 11122234456666665432
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCC--eEEEc
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCDT 378 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W~~v 378 (975)
-..+..|+.. ++..|....+..| +++... ++.++|.+.. ...|..||++++ .|+.-
T Consensus 145 -~~~v~~~d~~--G~~~w~~~~~~~~-----~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 145 -TSEVREIAPN--GQLLNSVKLSGTP-----FSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp -TTEEEEECTT--SCEEEEEECSSCC-----CEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEEE
T ss_pred -CCEEEEECCC--CCEEEEEECCCCc-----cceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEec
Confidence 2346777665 4445554432212 234444 6788887653 234899999966 46543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=94.47 E-value=4.8 Score=42.68 Aligned_cols=186 Identities=10% Similarity=0.060 Sum_probs=90.7
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.+..||+.+++.......+ .....++.. + +.+|+.+.. .+.+++||+.+....-..+. .+..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~-- 84 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG-----YDFVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQ-EGQS-- 84 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC-----CCEEEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEE-ECSS--
T ss_pred CCeEEEEeCcccceeeeEEcc-----CCcceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecc-cCCC--
Confidence 458899999999887665432 111133332 3 357776652 24899999988642122222 2221
Q ss_pred CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eEEEecCCCCCC
Q 002047 227 PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASS 304 (975)
Q Consensus 227 ~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~lyvfGG~~~~~ 304 (975)
+ .++++.. ++++|| .+...+ ....+++||+.+. +....-..+. ..+..+...++ .+|+.+..+..
T Consensus 85 ~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~~- 151 (331)
T 3u4y_A 85 S--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIPY-----DAVGIAISPNGNGLILIDRSSAN- 151 (331)
T ss_dssp C--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECCT-----TEEEEEECTTSSCEEEEEETTTT-
T ss_pred C--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECCC-----CccceEECCCCCEEEEEecCCCc-
Confidence 1 2313333 344566 332221 1237999999888 5544433322 22334444455 47776543221
Q ss_pred CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 305 ~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
.++.|+...++...... ....+....-..+++. ++ .+|+.+.. .+.+.+||+++.+.
T Consensus 152 ----~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 152 ----TVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp ----EEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred ----eEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 03333332333221111 0000111122334443 34 57776532 34589999988764
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=94.47 E-value=2.9 Score=44.11 Aligned_cols=180 Identities=13% Similarity=0.083 Sum_probs=87.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.++....... .....-.+++.. ++..++.|+. ...+.+||+.+.. ..... .. ...
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------dg~v~~~d~~~~~--~~~~~---~~-~~~ 184 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQT--LVRQF---QG-HTD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE--EEEEE---CC-CSS
T ss_pred CcEEEEECCCCCcceeeecc--cCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCc--eeeee---ec-ccC
Confidence 47888999887754433221 011111222222 3456666664 2468999998753 22211 11 111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-.+++...++..++.|+.++ .+..||+.+. +-........ .........++.++++|+.++
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~------ 246 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESS------ 246 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTS------
T ss_pred ceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecCCC-----ceEEEEECCCCCEEEEEcCCC------
Confidence 122333333445666776553 6899999887 3322221111 222333345677777776543
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
.+..++........ ... ....-.++++. ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 247 ~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred cEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecCC---------CcEEEEECCCCeEE
Confidence 24444444332221 111 11112233333 46677777643 34889999887654
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.018 Score=62.27 Aligned_cols=22 Identities=5% Similarity=0.221 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCeEEEEecccc
Q 002047 885 DRVMEFCNNNDLQLIVRAHECV 906 (975)
Q Consensus 885 ~~~~~fl~~~~l~~iiR~H~~~ 906 (975)
+.+.+.++++++++++-||.-.
T Consensus 203 ~~l~~~l~~~~v~~~l~GH~H~ 224 (313)
T 1ute_A 203 KQLLPLLTTHKVTAYLCGHDHN 224 (313)
T ss_dssp HHTHHHHHHTTCSEEEECSSSS
T ss_pred HHHHHHHHHcCCcEEEECChhh
Confidence 5677788899999999999864
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=94.41 E-value=5.7 Score=47.86 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=65.6
Q ss_pred CcEEEEECCCCc--EEEecCCCCCC-----CCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPP-----TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P-----~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.+|..+++ |+.-....... ......+.++.+++||+... ...++.+|..+....|+.-...
T Consensus 76 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~- 147 (668)
T 1kv9_A 76 SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD- 147 (668)
T ss_dssp GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-
T ss_pred CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-
Confidence 368899988764 88743321000 00112334556788887642 2579999999887779875311
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+.++.++ .+|+..+......-..++.||+.+....|+.-.
T Consensus 148 ~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 148 PAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 1111122223345565 677643322122345799999999888898753
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=94.21 E-value=0.053 Score=62.01 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=42.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC------h-HHHHHHHHHhhhcCCCCEEEEec
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH------S-LETITLLLALKVEYPNNVHLIRG 770 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~------s-~evl~ll~~lk~~~P~~v~llrG 770 (975)
.++.++||+|.....+. +++.+.....+-+ -+|++||+++.+.. . -+...++..+.... -++.+.|
T Consensus 120 ~~f~~igD~~~~~~~~~-~l~~~~~~~~~~D----~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~G 192 (424)
T 2qfp_A 120 YTFGLIGDLGQSFDSNT-TLSHYELSPKKGQ----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTAG 192 (424)
T ss_dssp EEEEEECSCTTBHHHHH-HHHHHHTCSSCCC----EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECCC
T ss_pred eEEEEEEeCCCCCChHH-HHHHHHhCCCCCC----EEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeecC
Confidence 36899999998875442 3443322110111 58889999986421 1 12233444443333 4999999
Q ss_pred cccccc
Q 002047 771 NHEAAD 776 (975)
Q Consensus 771 NHE~~~ 776 (975)
|||...
T Consensus 193 NHD~~~ 198 (424)
T 2qfp_A 193 NHEIEF 198 (424)
T ss_dssp HHHHCC
T ss_pred Cccccc
Confidence 999863
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=93.92 E-value=7.8 Score=41.22 Aligned_cols=188 Identities=15% Similarity=0.100 Sum_probs=91.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCC-----CccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPT-----PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~-----pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.||+.+.+-......+.... +..-+.++.. ++.+|+.+... ...+++||+.+... -..++..
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~-~~~~~~~- 183 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKL-KTAIQNT- 183 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEE-EEEECCC-
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCce-EEEecCC-
Confidence 478999998876433322211111 1112334443 34777776321 34699999987531 1122111
Q ss_pred CCCCCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCC
Q 002047 223 PGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGR 300 (975)
Q Consensus 223 ~~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~ 300 (975)
...-+.++.. +++.+|+... -+.+++||+.+....|..... ...+. ......+... ++.+|+....
T Consensus 184 ----~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 184 ----GKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLL-DDGKE-HFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp ----CTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECC-CSSSC-CCEEEEEEETTTTEEEEEESS
T ss_pred ----CCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcC-CCCCC-cccceEEECCCCCEEEEEeCC
Confidence 1112233333 4446777643 247899999888433332221 11111 1112223333 4457665432
Q ss_pred CCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.+.++.++..+. +..+....+ .+ ..+++. ++.+|+.+.. .+.|.+||+.+.+....
T Consensus 252 ------~~~v~~~d~~~~-~~~~~~~~~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 252 ------AAEVLVVDTRNG-NILAKVAAP---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ------SSEEEEEETTTC-CEEEEEECS---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred ------CCEEEEEECCCC-cEEEEEEcC---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEEE
Confidence 245666765443 322222221 11 223333 3468876542 24599999999876544
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=93.79 E-value=1.9 Score=44.41 Aligned_cols=189 Identities=12% Similarity=0.064 Sum_probs=92.3
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCC-CCCcEEEEEecCCCC
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ-QRPRWHRVVVQGPGP 225 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t-~~~~W~~v~~~g~~P 225 (975)
....++.+|+.+.....+... ...-.+++.. +++.+++++. ..++++|+.+ .. ...+. ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~--~~~~~---~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT-----PELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPS--PEKVD---TGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE-----SSCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCS--CEECC---CTT
T ss_pred cceeEEEEeCCCCceeeeccC-----CcceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCC--ceEec---ccc
Confidence 456899999999887766432 1112222222 3455555542 4799999988 53 44332 112
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCe-EEEecCCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASS 304 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~-lyvfGG~~~~~ 304 (975)
....-..++...++..+++++.+.. ....+|.+|+.+. ....+.... .........+++ |++.++.++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~------~~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKNL------PSYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSSS------SEEEEEECTTSSEEEEEEEETT--
T ss_pred ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecCC------CccceEECCCCCEEEEEECCCC--
Confidence 1122222333333345555543221 3468999998877 444443321 122222333454 444444332
Q ss_pred CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCE-EEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 305 ~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~-L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
...+|.++.... . ....... ...-..+++. ++. |++.+..++ ...+|.+++.+.....+.
T Consensus 152 --~~~l~~~~~~~~-~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 152 --VFDIYSMDIDSG-V--ETRLTHG---EGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp --EEEEEEEETTTC-C--EEECCCS---SSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECC
T ss_pred --ceEEEEEECCCC-c--ceEcccC---CCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEe
Confidence 235666654433 2 2222211 1111223332 444 444443322 345899998877766554
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=93.70 E-value=8 Score=40.66 Aligned_cols=180 Identities=12% Similarity=0.121 Sum_probs=85.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||..+......-.. ....-.+++.. ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 46 ~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~------d~~i~vwd~~~~~-~~~~~~--~---~~~~ 109 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSNLLVSASD------DKTLKIWDVSSGK-CLKTLK--G---HSNY 109 (312)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred eEEEEeCCCcccchhhcc----CCCceEEEEEcCCCCEEEEECC------CCEEEEEECCCCc-EEEEEc--C---CCCC
Confidence 567788877766554321 11111222222 3466677764 3578999998763 111221 1 0111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
-.++....++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 110 v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~------ 172 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTG--KCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGL------ 172 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--EEEEEecCCC----CcEEEEEEcCCCCEEEEEeCCCc------
Confidence 12222333335777777664 5889999876 3222111111 01122223346677777776542
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+..++.... .......... .... ..+++. ++.+++.|+.+ ..|.+||+.+.+-.
T Consensus 173 i~~wd~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASG-QCLKTLIDDD--NPPV-SFVKFSPNGKYILAATLD---------NTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTC-CEEEEECCSS--CCCE-EEEEECTTSSEEEEEETT---------TEEEEEETTTTEEE
T ss_pred EEEEECCCC-ceeeEEeccC--CCce-EEEEECCCCCEEEEEcCC---------CeEEEEECCCCcEE
Confidence 333333322 2111111111 1111 112222 45666776643 34889999887643
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=93.50 E-value=6.7 Score=43.82 Aligned_cols=175 Identities=15% Similarity=0.135 Sum_probs=85.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+.+||..+.+-...-.. ....-.+...++.+++.|+. ...+.+||+.+.. -...- .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~------dg~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSS------DSTVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEET------TSCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcC------CCeEEEEECCCCc--EEEEE-----cCCCC
Confidence 3678899887664433221 11122333446677777775 3569999998764 22111 11222
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEE-EEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-..+.+.+ .+++.|+.++ .+..||+.+..... ..... +. ...-.++.. ++..++.|+.++.
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~-~~----~~~v~~~~~-~~~~l~s~~~dg~----- 277 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRRVLV-GH----RAAVNVVDF-DDKYIVSASGDRT----- 277 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEEEEC-CC----SSCEEEEEE-ETTEEEEEETTSE-----
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeeeEec-CC----CCcEEEEEe-CCCEEEEEeCCCe-----
Confidence 233444555 4677777664 68888887652111 11111 11 111222333 5566666665432
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++..+. .-..... + ... ...++..++.+++.|+.++ .|.+||+.+.+-
T Consensus 278 -i~vwd~~~~-~~~~~~~-~---~~~-~v~~~~~~~~~l~~g~~dg---------~i~iwd~~~~~~ 328 (435)
T 1p22_A 278 -IKVWNTSTC-EFVRTLN-G---HKR-GIACLQYRDRLVVSGSSDN---------TIRLWDIECGAC 328 (435)
T ss_dssp -EEEEETTTC-CEEEEEE-C---CSS-CEEEEEEETTEEEEEETTS---------CEEEEETTTCCE
T ss_pred -EEEEECCcC-cEEEEEc-C---CCC-cEEEEEeCCCEEEEEeCCC---------eEEEEECCCCCE
Confidence 333333322 1111111 1 111 1223334566777777533 488999988753
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.43 E-value=9.2 Score=42.14 Aligned_cols=188 Identities=15% Similarity=0.098 Sum_probs=88.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+..||+.+.+....-.. .. ..-.+...++.+++.|+. ...+.+||+......-..+. + ....
T Consensus 156 g~i~iwd~~~~~~~~~~~~---~~--~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~--~---~~~~ 219 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAG---HQ--ARVGCLSWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQ--G---HSSE 219 (401)
T ss_dssp SCEEEEETTTCCEEEEECC---CS--SCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--C---CSSC
T ss_pred CeEEEEECcCCeEEEEecC---CC--CceEEEEECCCEEEEEcC------CCCEEEEecccCcceeeEEc--C---CCCC
Confidence 4688899887764433221 11 122223335556666664 35789999985421122222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
-.++....++.+++.|+.++ .+..||+.+.......... .. .....+..-.+..+++.||...+ ..
T Consensus 220 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~-~~----~v~~~~~~p~~~~ll~~~~gs~d----~~ 285 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTNH-NA----AVKAVAWCPWQSNLLATGGGTMD----KQ 285 (401)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECCC-SS----CCCEEEECTTSTTEEEEECCTTT----CE
T ss_pred eeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecCC-cc----eEEEEEECCCCCCEEEEecCCCC----CE
Confidence 22233333446777777664 6889999876323322211 11 11122222224567777652211 12
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
+..++............. ..-.++++. ++ .+++.+|.. ...+.+||..+.....+..+
T Consensus 286 i~i~d~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAG------SQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp EEEEETTTCCEEEEEECS------SCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCC------CcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEe
Confidence 444444333211111111 111222332 33 455544432 23488899888877766544
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.41 E-value=6.8 Score=41.96 Aligned_cols=96 Identities=9% Similarity=0.122 Sum_probs=51.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.+.+||+....+..+.... .....-.+++.. + +.+++.|+. ...+.+||+.+. +|..+... ...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~--~~~~~~~~---~~~ 100 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENG--RWSQIAVH---AVH 100 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET------TSCEEEEEEETT--EEEEEEEE---CCC
T ss_pred cEEEEecCCCcceeeeEec--CCCCcEEEEEeCCCCCCCEEEEecc------CCEEEEEEcCCC--ceeEeeee---cCC
Confidence 5777888766666654331 111111222222 2 466666664 246889999886 36665532 212
Q ss_pred CcccEEEEe-CC--cEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~-~~--~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
......+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred CcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 222233333 22 35777776654 6788888765
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=93.40 E-value=3.2 Score=43.99 Aligned_cols=154 Identities=12% Similarity=0.114 Sum_probs=84.6
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+++++.|.. ...++++|..+....|+.-. +.....|.+.+..++.+|+.+ -+.++.||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 567777653 36799999977655677643 111223555555555788843 245999999 66
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-CCCCcceeeEEEeC
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRYQHAAVFVN 343 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-~P~~R~~hs~v~~~ 343 (975)
...|+.-.... ...+.+....++++++....+ ...++.++......|++...... .+...........+
T Consensus 66 ~~~W~~~~~~~-----~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPAG-----CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCTT-----CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCCC-----ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 67887654211 133445556677777764421 23466676543334555433221 11111122233445
Q ss_pred CEEEEEcCcCCCCCccccCCcEEEEECCCC-eEE
Q 002047 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (975)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~-~W~ 376 (975)
+.+++.... ...|.+||++-. .|+
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPNGQLLNS 160 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTTSCEEEE
T ss_pred CCEEEEecC---------CCEEEEECCCCCEEEE
Confidence 666665432 345899999833 354
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=93.38 E-value=0.079 Score=60.59 Aligned_cols=70 Identities=16% Similarity=0.128 Sum_probs=40.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhC-CC-CCCCCccceeEEEeccccCCCCC-----h-H-HHHHHHHHhhhcCCCCEEEE
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYG-SP-STAGDIAYIDYLFLGDYVDRGQH-----S-L-ETITLLLALKVEYPNNVHLI 768 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g-~~-~~~~~~~~~~~vfLGDyVDRG~~-----s-~-evl~ll~~lk~~~P~~v~ll 768 (975)
.+++++||+|...... +.++.+. .. ..+ -+|++||+++.+.. . . +...+|-.+.... -++.+
T Consensus 127 ~~f~~~gD~~~~~~~~-~~l~~i~~~~~~~D------~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v 197 (426)
T 1xzw_A 127 YVFGLIGDIGQTHDSN-TTLTHYEQNSAKGQ------AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWT 197 (426)
T ss_dssp EEEEEECSCTTBHHHH-HHHHHHHHCTTCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECC
T ss_pred eEEEEEEeCCCCCchH-HHHHHHHhCCCCCC------EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEe
Confidence 3589999999875322 2232221 11 111 58889999975321 1 1 1233444444333 48999
Q ss_pred eccccccc
Q 002047 769 RGNHEAAD 776 (975)
Q Consensus 769 rGNHE~~~ 776 (975)
.||||...
T Consensus 198 ~GNHD~~~ 205 (426)
T 1xzw_A 198 AGNHEIDY 205 (426)
T ss_dssp CCGGGCCC
T ss_pred cccccccc
Confidence 99999864
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=93.25 E-value=11 Score=42.10 Aligned_cols=178 Identities=12% Similarity=0.072 Sum_probs=85.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+..||+.+.+-...-.. ....-.++..++..++.|+. ...+.+||+.+.. .+.. +.....
T Consensus 219 g~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~----~~~~---~~~~~~ 280 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET----CLHT---LQGHTN 280 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE----EEEE---ECCCSS
T ss_pred CEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcC------CCEEEEEECCCCc----EeEE---ecCCCC
Confidence 4677778776543322111 11112233335666666664 3568899987752 2221 111122
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
.-.++.+++ ..++.|+.++ .+..||+.+....+..... . ....+... ++.+++.|+.++.
T Consensus 281 ~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~--~-----~~v~~~~~-~~~~l~~~~~dg~------ 340 (445)
T 2ovr_B 281 RVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLTGH--Q-----SLTSGMEL-KDNILVSGNADST------ 340 (445)
T ss_dssp CEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEECCC--C-----SCEEEEEE-ETTEEEEEETTSC------
T ss_pred ceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEEcCC--c-----ccEEEEEE-eCCEEEEEeCCCe------
Confidence 223334455 5666676654 5889999877322222111 1 11222333 4556666665432
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+..++.... .-..... +.. .......++..++.+++.|+.+ ..|.+||+.+.+...
T Consensus 341 i~vwd~~~~-~~~~~~~-~~~-~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 341 VKIWDIKTG-QCLQTLQ-GPN-KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTTC-CEEEEEC-STT-SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred EEEEECCCC-cEEEEEc-cCC-CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 333433322 2122211 110 1112223344466777777753 348899999887544
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=93.15 E-value=3.4 Score=43.81 Aligned_cols=200 Identities=15% Similarity=0.061 Sum_probs=115.1
Q ss_pred eEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEE
Q 002047 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (975)
Q Consensus 178 hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~ 257 (975)
.+....++.||+..|.. ..+.++|+.+....-+. ++..-++.+++..++ +||+.... -+.++
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~------l~~~~FgeGit~~g~-~Ly~ltw~-----~~~v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME------RLGNIFAEGLASDGE-RLYQLTWT-----EGLLF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE------ECTTCCEEEEEECSS-CEEEEESS-----SCEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE------CCCCcceeEEEEeCC-EEEEEEcc-----CCEEE
Confidence 56666688999999863 23899999987422222 233445667777776 89998653 36899
Q ss_pred EEECCCCCcEEEE-ccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcce
Q 002047 258 ALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ 336 (975)
Q Consensus 258 ~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~ 336 (975)
+||+.+. +-.. +...+ ..-+++..+++||+.-| .+.++.+|+.+...-.-+.+... +.+...
T Consensus 120 V~D~~Tl--~~~~ti~~~~-------eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~-g~~v~~ 182 (268)
T 3nok_A 120 TWSGMPP--QRERTTRYSG-------EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR-GQPVEL 182 (268)
T ss_dssp EEETTTT--EEEEEEECSS-------CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEECCcC--cEEEEEeCCC-------ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC-Cccccc
Confidence 9999887 4332 22211 12345566889999865 23577777766544444444321 222111
Q ss_pred -eeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---EEEcccCcCC-CCCCCCccccCCCCCccCCCccceeEE
Q 002047 337 -HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTS-PRTGRYSADAAGGDAAVELTRRCRHAA 411 (975)
Q Consensus 337 -hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~---W~~v~~~~~~-p~~~~~~~~~~~~~~~~~p~~R~~hsa 411 (975)
--+...+++||+-- ...++|.+.|+++++ |..+..+... +.. .....-.--+.
T Consensus 183 lNeLe~~dG~lyanv---------w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~-------------~~~~~~vlNGI 240 (268)
T 3nok_A 183 INELECANGVIYANI---------WHSSDVLEIDPATGTVVGVIDASALTRAVAGQ-------------VTNPEAVLNGI 240 (268)
T ss_dssp EEEEEEETTEEEEEE---------TTCSEEEEECTTTCBEEEEEECHHHHHHHTTT-------------CCCTTCCEEEE
T ss_pred ccccEEeCCEEEEEE---------CCCCeEEEEeCCCCcEEEEEECCCCccccccc-------------ccCcCCceEEE
Confidence 12445588888631 125679999999985 4444432100 000 00001122344
Q ss_pred EEE--CCEEEEEcCCCCCCCccceEeeecc
Q 002047 412 AAV--GDLIFIYGGLRGGVLLDDLLVAEDL 439 (975)
Q Consensus 412 ~~~--~~~LyV~GG~~~~~~l~Dv~~ld~~ 439 (975)
+.. +++|||.|= ++..+|.+.++
T Consensus 241 A~dp~~~rlfVTGK-----~Wp~~~ev~~~ 265 (268)
T 3nok_A 241 AVEPGSGRIFMTGK-----LWPRLFEVRLD 265 (268)
T ss_dssp EECTTTCCEEEEET-----TCSEEEEEEEE
T ss_pred EEcCCCCEEEEeCC-----CCCceEEEEEE
Confidence 444 578999884 56777766553
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=93.02 E-value=3.7 Score=45.50 Aligned_cols=193 Identities=10% Similarity=-0.021 Sum_probs=92.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+|.+|+.+..+..+... +.+..-.+++.. ++.+++.++. ...+++||+.+.. .......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~------~~~i~~~d~~~g~--~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRF---KTGFQPKSVRFIDNTRLAIPLLE------DEGMDVLDINSGQ--TVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEE---ECSSCBCCCEESSSSEEEEEBTT------SSSEEEEETTTCC--EEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEE---cCCCCceEEEEeCCCeEEEEeCC------CCeEEEEECCCCe--EeeecCcccccccCC
Confidence 788888877766655432 111112223333 5678877764 2469999998764 333221101111111
Q ss_pred cc-EEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCc
Q 002047 230 GH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPL 307 (975)
Q Consensus 230 ~h-~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l 307 (975)
.. +++.-.++.+|+.|+.+ ..+.+||+.+....+... .... .....+... +..+|+.++.++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~l~~~~~~~~----- 234 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGK-----WSKILLYDPIRDLVYCSNWISE----- 234 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSS-----SEEEEEEETTTTEEEEEETTTT-----
T ss_pred ceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCC-----CeeEEEEcCCCCEEEEEecCCC-----
Confidence 11 22222344788877654 368999998863333322 1111 112222333 445666665432
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.++.... ...+.. . ....-.++++. ++..+++++...... ......|++||+.+.+-...
T Consensus 235 -~i~~~d~~~~-~~~~~~-~----~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 235 -DISVIDRKTK-LEIRKT-D----KIGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp -EEEEEETTTT-EEEEEC-C----CCSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEEE
T ss_pred -cEEEEECCCC-cEEEEe-c----CCCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEee
Confidence 3555554433 332221 1 11112333333 444444454322211 00134699999998865443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=92.99 E-value=12 Score=41.06 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=49.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..-...-.. ....-.+++.. ++.+++.|+. ...+.+||+.+... -..+. + ....
T Consensus 120 ~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~-~~~~~--~---h~~~ 183 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQ------DMQLKIWSVKDGSN-PRTLI--G---HRAT 183 (420)
T ss_dssp CEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCC-CEEEE--C---CSSC
T ss_pred CEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeC------CCeEEEEeCCCCcC-ceEEc--C---CCCc
Confidence 678888887665444211 11112233333 3456666664 35799999987531 22222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 184 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp EEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 22333343445666777664 5888999877
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=92.77 E-value=3.5 Score=46.30 Aligned_cols=189 Identities=12% Similarity=0.133 Sum_probs=97.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.+|+.+.+...+... + ....+.+.. ++ +|++.+... ....+|++|+.+.. ...+. . ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~---~--~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~--~~~l~---~--~~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASF---P--RHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQ--IRQVT---D--GR 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECC---S--SCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCC--EEECC---C--CS
T ss_pred cEEEEEECCCCcEEEeecC---C--CcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCC--EEeCc---C--CC
Confidence 4799999999888776543 1 112222222 33 555554431 13479999998763 44443 1 11
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~ 306 (975)
..-...+.. +++.|++.+..++ ...+|.+|+.+. +-..+.... ..........+++.+++++.+..
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g---~~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g--- 333 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAG---RPQVYKVNINGG--APQRITWEG-----SQNQDADVSSDGKFMVMVSSNGG--- 333 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSS--CCEECCCSS-----SEEEEEEECTTSSEEEEEEECSS---
T ss_pred CcccceEECCCCCEEEEEECCCC---CcEEEEEECCCC--CEEEEecCC-----CcccCeEECCCCCEEEEEECcCC---
Confidence 111222222 3333444432222 347999999887 444443221 12223333456666666654321
Q ss_pred ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 307 l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
...++.++.... .. ..+... . ...+.++. +++++++++.++. ...||++|+.+.....+..
T Consensus 334 ~~~i~~~d~~~~-~~--~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 334 QQHIAKQDLATG-GV--QVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp CEEEEEEETTTC-CE--EECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCC
T ss_pred ceEEEEEECCCC-CE--EEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeC
Confidence 245666655543 32 233321 1 22223333 5666667664332 2369999999887776654
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.70 E-value=3.9 Score=45.24 Aligned_cols=183 Identities=14% Similarity=0.129 Sum_probs=91.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..++.||..+.......... ....-.+++.. ++.+++.|+. ...+.+||+.+.. ....- ....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~------dg~i~iwd~~~~~--~~~~~-----~~~~ 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLG------NGLVDIYDVESQT--KLRTM-----AGHQ 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTCC--EEEEE-----CCCS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECC------CCeEEEEECcCCe--EEEEe-----cCCC
Confidence 37899999988876664431 11112222222 4456666664 2468999998763 22211 1122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
..-..+.+++ .+++.|+.++ .+..||+......-..+..... .........++.+++.|+.++.
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~----- 240 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGHSS-----EVCGLAWRSDGLQLASGGNDNV----- 240 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSC-----
T ss_pred CceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCCCC-----CeeEEEEcCCCCEEEEEeCCCe-----
Confidence 2233344455 5777777654 6888998743112222221111 1222233346777888876542
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+..++.... .-...... ....-.++++. +..+++.||-.. ...+.+||+.+.+-..
T Consensus 241 -v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 241 -VQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARVN 298 (401)
T ss_dssp -EEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEEE
T ss_pred -EEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEEE
Confidence 333333322 11222111 11112233333 446777775211 2348899998876543
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=92.63 E-value=4.5 Score=47.96 Aligned_cols=111 Identities=16% Similarity=0.261 Sum_probs=61.4
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCc---cceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNK--WSRITPFGEPPTPR---AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR---~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
.++.||..+.+ |+.-........+. ...+.++.+++||+... ...++.+|..+....|+.-. ..+
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~---~~~ 148 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKF---ADH 148 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEEC---SCG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecC---CCC
Confidence 38899998764 88754331100111 12344567888887532 35799999998877798643 111
Q ss_pred CCCc--ccEEEEeCC----cEEEEEcCCCC-CCCCCcEEEEECCCCCcEEEEc
Q 002047 226 GPRY--GHVMALVGQ----RYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 226 ~~R~--~h~~~~~~~----~~lyV~GG~~g-~~~~ndv~~yDl~s~~~~W~~v 271 (975)
...+ ..+-++.++ +.++++|...+ ...-..++.||+.+....|+.-
T Consensus 149 ~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 1111 112223332 11334443211 1224579999999988899753
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=92.53 E-value=12 Score=39.58 Aligned_cols=192 Identities=11% Similarity=0.049 Sum_probs=94.2
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.++.+|+.+.+.......+. + -++++.. ++.+|+.++. .+.+++||+.+....+ .+.. +....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~-~~~~-~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL----K-PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKG-RLVL-DDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS----C-CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEE-EEES-CCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCC----C-cceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEE-EEec-CCCcc
Confidence 4578999998876554433221 1 2233333 3467877653 2479999998864222 2321 11111
Q ss_pred -----CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 227 -----PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 227 -----~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
+..-+.+++. +++.+|+.+... -..+++||+.+....+.. ...+.. ....+....++.+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~----~~~~~~s~dg~~l~~~~~- 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM----STGLALDSEGKRLYTTNA- 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT----CCCCEEETTTTEEEEECT-
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc----cceEEECCCCCEEEEEcC-
Confidence 1112333333 344688776322 246999999887323322 212221 112222223445666533
Q ss_pred CCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
+ ..++.++..+. +-.+....+.........++++. ++.+|+.... .+.+++||+.+.+....
T Consensus 205 ~------~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 205 D------GELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILAK 268 (353)
T ss_dssp T------SEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEEE
T ss_pred C------CeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEEE
Confidence 1 34556655433 33333222111111222233443 4567776431 35699999998876544
Q ss_pred c
Q 002047 379 K 379 (975)
Q Consensus 379 ~ 379 (975)
-
T Consensus 269 ~ 269 (353)
T 3vgz_A 269 V 269 (353)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.02 E-value=4.2 Score=43.65 Aligned_cols=197 Identities=10% Similarity=0.115 Sum_probs=96.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.+..||+.+..|..+.... .....-.+++.. + +.+++.|+. ...+.+||+.+.. ........+ ..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~-~~~~~~~~~---~~ 147 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENG-TTSPIIIDA---HA 147 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTS-CCCEEEEEC---CT
T ss_pred EEEEEEcCCCceeEeeeec--CCCcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCC-ceeeEEecC---CC
Confidence 6788999998887765441 111112222222 2 456666664 3578899988752 122221111 11
Q ss_pred CcccEEEEeC-------------CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeC---
Q 002047 228 RYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD--- 291 (975)
Q Consensus 228 R~~h~~~~~~-------------~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~--- 291 (975)
..-.+++... ++.+++.|+.++ .+..||+.+....|..+....... ......+...+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLL 220 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSS
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEeccc--CcEeEEEECCCCCC
Confidence 1111222222 236777777665 577888766533565543322110 11222223334
Q ss_pred CeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEEC
Q 002047 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (975)
Q Consensus 292 g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~ 370 (975)
+.+++.|+.++. -.+|.+..... .+........ .....-.++++. ++.++++|+.++ .+.+||+
T Consensus 221 ~~~l~s~~~dg~----i~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg---------~i~iw~~ 285 (379)
T 3jrp_A 221 RSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWKE 285 (379)
T ss_dssp SEEEEEEETTSC----EEEEEESSTTS-CCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS---------SEEEEEE
T ss_pred CCeEEEEeCCCE----EEEEeCCCCCc-cceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC---------cEEEEeC
Confidence 688888876643 23444433211 2222222211 112222233332 566777776533 2667777
Q ss_pred C-CCeEEEcccC
Q 002047 371 A-AGVWCDTKSV 381 (975)
Q Consensus 371 ~-t~~W~~v~~~ 381 (975)
. ...|..+...
T Consensus 286 ~~~~~~~~~~~~ 297 (379)
T 3jrp_A 286 NLEGKWEPAGEV 297 (379)
T ss_dssp EETTEEEEEEEE
T ss_pred CCCCccccccce
Confidence 6 5688887765
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=91.60 E-value=10 Score=40.57 Aligned_cols=134 Identities=14% Similarity=0.157 Sum_probs=64.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+.+||+.+..|..+.... .....-.+++.. ++.+++.|+. ...+.+||+.+.. +....... ....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~--~~~~~~~~--~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTCGT------DRNAYVWTLKGRT--WKPTLVIL--RINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEEET------TSCEEEEEEETTE--EEEEEECC--CCSS
T ss_pred CEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEEcC------CCeEEEEECCCCe--eeeeEEee--cCCC
Confidence 36888999888766554331 111112223333 4456666664 2468899987753 54443111 1122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.-.++....++.+++.|+.++ .+..||+.+....+........ ............++.+++.|+.++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKP--IRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTT--CCSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecc--cCCCeeEEEEcCCCCEEEEEcCCC
Confidence 222333333445677776554 4666666554212222211110 011222223334667777777553
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=91.47 E-value=12 Score=40.01 Aligned_cols=201 Identities=10% Similarity=0.069 Sum_probs=90.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+|.+|..+++++.+........| ..++.. ++++|+.+..+ ....+++||+.+.. ++.+.... .....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~--~~~~~~~~--~~~~~ 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKED----DEGGIAAWQIDGQT--AHKLNTVV--APGTP 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEET----TEEEEEEEEEETTE--EEEEEEEE--EESCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecC----CCceEEEEEecCCc--EEEeeeee--cCCCC
Confidence 478888888888775432111111 122322 45777665421 13579999996653 55544210 00111
Q ss_pred ccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECC-CCCcEE-EEccCCCCCCCC----cceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTA-AKPYEW-RKLEPEGEGPPP----CMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~-s~~~~W-~~v~~~~~~P~~----r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-..+++- +++.||+.+..+ +.+.+||+. ....+. ..+...+..|.+ ...+..+...++++|+.+..+
T Consensus 88 p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~- 161 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS- 161 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-
T ss_pred CEEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-
Confidence 1233333 344677765322 357778774 221122 112222222211 122334444567777764322
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
+.++.|+...++.......... +....-..+++. ++ .||+.+...+ .-.+|.++..+.++..+..
T Consensus 162 -----~~v~~~~~~~~g~~~~~~~~~~-~~g~~p~~~~~spdg~~l~v~~~~~~-------~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 162 -----DKVYVYNVSDAGQLSEQSVLTM-EAGFGPRHLVFSPDGQYAFLAGELSS-------QIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp -----TEEEEEEECTTSCEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTT-------EEEEEEEETTTTEEEEEEE
T ss_pred -----CEEEEEEECCCCcEEEeeeEEc-CCCCCCceEEECCCCCEEEEEeCCCC-------EEEEEEecCCCCceEEeee
Confidence 2355555443444433221111 111111123333 44 4777654221 1124455555688766654
Q ss_pred C
Q 002047 381 V 381 (975)
Q Consensus 381 ~ 381 (975)
.
T Consensus 229 ~ 229 (347)
T 3hfq_A 229 V 229 (347)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=91.36 E-value=6.5 Score=41.72 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=51.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC-
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG- 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~- 226 (975)
+.++++|+.+.+....-..+ .....+.++.. + +.+|+.+.. ...+++||+.+.. .......+..+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~--~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK--NTFHANLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc--EEEEEEccccccc
Confidence 47899999988765443331 10012333333 3 367777642 3579999998763 222211111111
Q ss_pred -CCcccEEEEe-CCcEEEEEcCC---CCCC---CCCcEEEEECCCC
Q 002047 227 -PRYGHVMALV-GQRYLMAIGGN---DGKR---PLADVWALDTAAK 264 (975)
Q Consensus 227 -~R~~h~~~~~-~~~~lyV~GG~---~g~~---~~ndv~~yDl~s~ 264 (975)
...-+.+++- ++++||+.+.. .... ..+.+++||+.+.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 1112333343 34356655421 0000 1257999999773
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=91.33 E-value=14 Score=41.23 Aligned_cols=172 Identities=14% Similarity=0.112 Sum_probs=84.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~ 230 (975)
.+..||+.+.+-...-.. ....-.+++ ..+.+++.|+. ...+.+||+.+.. .-..+. .....
T Consensus 140 ~i~vwd~~~~~~~~~~~~----h~~~v~~~~-~~~~~l~s~~~------dg~i~vwd~~~~~-~~~~~~------~h~~~ 201 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVG----HTGGVWSSQ-MRDNIIISGST------DRTLKVWNAETGE-CIHTLY------GHTST 201 (445)
T ss_dssp CEEEEETTTCCEEEECCC----CSSCEEEEE-EETTEEEEEET------TSCEEEEETTTTE-EEEEEC------CCSSC
T ss_pred cEEEEECCCCcEEEEEcC----CCCCEEEEE-ecCCEEEEEeC------CCeEEEEECCcCc-EEEEEC------CCCCc
Confidence 678899887654332211 111112222 33445666664 3578999998763 111121 11122
Q ss_pred cEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccce
Q 002047 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (975)
Q Consensus 231 h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~ 310 (975)
-.+..+.+ ..++.|+.++ .+..||+.+....+..... . ..-.++.. ++..++.|+.++. +
T Consensus 202 v~~~~~~~-~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~--~-----~~v~~~~~-~~~~l~~~~~dg~------i 261 (445)
T 2ovr_B 202 VRCMHLHE-KRVVSGSRDA-----TLRVWDIETGQCLHVLMGH--V-----AAVRCVQY-DGRRVVSGAYDFM------V 261 (445)
T ss_dssp EEEEEEET-TEEEEEETTS-----EEEEEESSSCCEEEEEECC--S-----SCEEEEEE-CSSCEEEEETTSC------E
T ss_pred EEEEEecC-CEEEEEeCCC-----EEEEEECCCCcEEEEEcCC--c-----ccEEEEEE-CCCEEEEEcCCCE------E
Confidence 23333444 3566676654 6888999877322322111 1 11122233 6777777775542 3
Q ss_pred EEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
..++.... .-.... .+ .... ..++..++..++.|+.++ .+.+||+.+.+-
T Consensus 262 ~iwd~~~~-~~~~~~-~~---~~~~-v~~~~~~~~~l~~~~~d~---------~i~i~d~~~~~~ 311 (445)
T 2ovr_B 262 KVWDPETE-TCLHTL-QG---HTNR-VYSLQFDGIHVVSGSLDT---------SIRVWDVETGNC 311 (445)
T ss_dssp EEEEGGGT-EEEEEE-CC---CSSC-EEEEEECSSEEEEEETTS---------CEEEEETTTCCE
T ss_pred EEEECCCC-cEeEEe-cC---CCCc-eEEEEECCCEEEEEeCCC---------eEEEEECCCCCE
Confidence 33333322 211111 11 1111 223333777777777533 388999988754
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=91.06 E-value=13 Score=39.92 Aligned_cols=180 Identities=14% Similarity=0.099 Sum_probs=83.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEe-cCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV-QGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~-~g~~P~~R 228 (975)
.+.++|..+..-...-.. ....-.+++.. ++.+++.||. ...+.+||+.+.......... .+. ..
T Consensus 78 ~v~iWd~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~------d~~v~iw~~~~~~~~~~~~~~~~~h---~~ 144 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPL----RSSWVMTCAYAPSGNYVACGGL------DNICSIYNLKTREGNVRVSRELAGH---TG 144 (340)
T ss_dssp EEEEEETTTCCEEEEEEC----SSSCEEEEEECTTSSEEEEEET------TCEEEEEETTTCSBSCEEEEEEECC---SS
T ss_pred cEEEEECCCCCcceEeec----CCccEEEEEECCCCCEEEEEeC------CCeEEEEECccCCCcceeEEEecCC---Cc
Confidence 677888776653322111 01111122222 3466677775 356889998765322222221 111 11
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-.++....++. ++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 145 ~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~d~~----- 207 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTGHT----GDVMSLSLAPDTRLFVSGACDAS----- 207 (340)
T ss_dssp CEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC-----
T ss_pred cEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcCCC----CceEEEEECCCCCEEEEEeCCCc-----
Confidence 111222233434 55555543 5888999887 4332211111 11222333446778888876543
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++.... .-... ..+ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-
T Consensus 208 -v~~wd~~~~-~~~~~-~~~---h~~~v~~v~~~p~~~~l~s~s~d~---------~v~iwd~~~~~~ 260 (340)
T 1got_B 208 -AKLWDVREG-MCRQT-FTG---HESDINAICFFPNGNAFATGSDDA---------TCRLFDLRADQE 260 (340)
T ss_dssp -EEEEETTTC-SEEEE-ECC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred -EEEEECCCC-eeEEE-EcC---CcCCEEEEEEcCCCCEEEEEcCCC---------cEEEEECCCCcE
Confidence 222332221 11111 111 11111223333 567778887543 378899988754
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=90.98 E-value=16 Score=38.05 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=54.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEE-EecCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV-VVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v-~~~g~~P~ 226 (975)
..+++||+.+.++..+...........-++++.. + +.+|+.... +.+++||+. .. ...+ ........
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~--~~~~~~~~~~~~~ 115 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GT--FEEIAKKDSEGRR 115 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SC--EEECCSBCTTSCB
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CC--EEEEEeccCCCcc
Confidence 4689999988888776431000011122344443 3 578887541 368999987 43 5444 21111011
Q ss_pred CCcccEEEEeCCcEEEEEcCCCC----------CCCCCcEEEEECC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDG----------KRPLADVWALDTA 262 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g----------~~~~ndv~~yDl~ 262 (975)
...-+.++.-.++.+|+....++ ......+++||+.
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 11233444444557888654321 1123579999987
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=90.94 E-value=17 Score=38.00 Aligned_cols=180 Identities=13% Similarity=0.114 Sum_probs=84.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.+-...-.. .... -.+++.. ++.+++.|+. ...+.+||+.+.. .-..+ +...
T Consensus 87 ~~i~vwd~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~-~~~~~------~~~~ 149 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG---HSNY-VFCCNFNPQSNLIVSGSF------DESVRIWDVKTGK-CLKTL------PAHS 149 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSC-EEEEEECSSSSEEEEEET------TSCEEEEETTTCC-EEEEE------CCCS
T ss_pred CEEEEEECCCCcEEEEEcC---CCCC-EEEEEEcCCCCEEEEEeC------CCcEEEEECCCCE-EEEEe------cCCC
Confidence 3678889887653322111 0111 1112222 3456666664 3468999998753 11122 1111
Q ss_pred cccE-EEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 229 YGHV-MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 229 ~~h~-~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
..-. ++...++.+++.|+.++ .+..||+.+. +....-..... ..........++..++.|+.++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~----- 214 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDN----- 214 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCSSC---CCEEEEEECTTSSEEEEEETTT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEeccCC---CceEEEEECCCCCEEEEEcCCC-----
Confidence 1122 22333445777777664 5888999876 33221111110 1122223334666777776543
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCccee--eEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQH--AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~h--s~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
.+..++.... .-.... .+.. ...... .....++.+++.|+.++ .|.+||+.+.+
T Consensus 215 -~i~iwd~~~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg---------~i~vwd~~~~~ 270 (312)
T 4ery_A 215 -TLKLWDYSKG-KCLKTY-TGHK-NEKYCIFANFSVTGGKWIVSGSEDN---------LVYIWNLQTKE 270 (312)
T ss_dssp -EEEEEETTTT-EEEEEE-CSSC-CSSSCCCEEEECSSSCEEEECCTTS---------CEEEEETTTCC
T ss_pred -eEEEEECCCC-cEEEEE-EecC-CceEEEEEEEEeCCCcEEEEECCCC---------EEEEEECCCch
Confidence 2333333322 211111 1111 111111 11223567778887543 38889998875
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.51 E-value=20 Score=38.13 Aligned_cols=180 Identities=14% Similarity=0.140 Sum_probs=88.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..+|+.+.+-...-... +.. ..+++.. ++..++.|+. ...+.+||+.+....+. +. ....
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~~~--~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~-~~-----~~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--PVD--AWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYS-LD-----TRGK 165 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--TTC--CCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEE-EE-----CSSS
T ss_pred CcEEEEECCCCCEEEEEeCC--Ccc--EEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEE-ec-----CCCc
Confidence 46788898877643332211 111 1122222 4466666664 35688999987642222 22 1111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-.+++...++.+++.|+.++ .+..||+.+. +-...-..... .....+...++.+++.|+.++.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h~~----~v~~l~~spd~~~l~s~s~dg~----- 229 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGHAM----PIRSLTFSPDSQLLVTASDDGY----- 229 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCSS----CCCEEEECTTSCEEEEECTTSC-----
T ss_pred eEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEcccCC----ceeEEEEcCCCCEEEEEcCCCe-----
Confidence 222333334446777777664 5889999887 43222111111 1122233446778888876543
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+..++.... .... ...+ ....-.++++. ++.+++.|+.++ .|.++|+.+.+-.
T Consensus 230 -i~iwd~~~~-~~~~-~~~~---h~~~v~~~~~sp~~~~l~s~s~D~---------~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 230 -IKIYDVQHA-NLAG-TLSG---HASWVLNVAFCPDDTHFVSSSSDK---------SVKVWDVGTRTCV 283 (321)
T ss_dssp -EEEEETTTC-CEEE-EECC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEEE
T ss_pred -EEEEECCCc-ceeE-EEcC---CCCceEEEEECCCCCEEEEEeCCC---------cEEEEeCCCCEEE
Confidence 233333222 1111 1111 11111223333 566777777543 3888999887643
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=90.18 E-value=18 Score=37.65 Aligned_cols=150 Identities=15% Similarity=0.060 Sum_probs=73.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc-ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~-~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~ 262 (975)
++..++.|+. ...+.+||+.+.. +...... ..... -.+++...++.+++.|+.++ .+..||+.
T Consensus 108 ~~~~l~~~~~------d~~i~~~d~~~~~--~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~ 171 (337)
T 1gxr_A 108 DGCTLIVGGE------ASTLSIWDLAAPT--PRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLH 171 (337)
T ss_dssp TSSEEEEEES------SSEEEEEECCCC----EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred CCCEEEEEcC------CCcEEEEECCCCC--cceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCC
Confidence 3456666654 3579999998763 3222211 11111 12333333445667776654 58899998
Q ss_pred CCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe
Q 002047 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (975)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~ 342 (975)
+. +....-.... ..........++..++.|+.++ .+..++.... .-..... ....-.++++.
T Consensus 172 ~~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~-~~~~~~~-----~~~~v~~~~~s 233 (337)
T 1gxr_A 172 NQ--TLVRQFQGHT----DGASCIDISNDGTKLWTGGLDN------TVRSWDLREG-RQLQQHD-----FTSQIFSLGYC 233 (337)
T ss_dssp TT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEEC
T ss_pred CC--ceeeeeeccc----CceEEEEECCCCCEEEEEecCC------cEEEEECCCC-ceEeeec-----CCCceEEEEEC
Confidence 87 4433221111 1222223334666777776543 2444444333 2111111 11112233332
Q ss_pred -CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
++.++++|+.+ ..+.+||+.+.+-.
T Consensus 234 ~~~~~l~~~~~~---------~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 234 PTGEWLAVGMES---------SNVEVLHVNKPDKY 259 (337)
T ss_dssp TTSSEEEEEETT---------SCEEEEETTSSCEE
T ss_pred CCCCEEEEEcCC---------CcEEEEECCCCCeE
Confidence 55677777643 34889999887543
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.86 E-value=5.1 Score=48.86 Aligned_cols=96 Identities=9% Similarity=0.122 Sum_probs=53.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.+.+||+....+..+.... .....-.+++.. + +.+++.|+. ...+.+||+.+. +|..+... ...
T Consensus 32 ~I~vwd~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~~--~~~~~~~~---~~h 98 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENG--RWSQIAVH---AVH 98 (753)
T ss_dssp EEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCTTSCSEEEEEET------TSCEEEEEEETT--EEEEEEEE---CCC
T ss_pred cEEEEecCCCCCccceecc--CCcCceEEEEecCCCCCCEEEEEeC------CCeEEEEECCCC--cccccccc---cCC
Confidence 6788888877777665431 111111222222 2 566677764 356899998876 36665522 222
Q ss_pred CcccEEEEe-CC--cEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~-~~--~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
...-..+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 222233333 22 35777777664 6788888665
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=89.49 E-value=18 Score=39.03 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=29.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccce-EEEEeCC-EEEEEeccCCCCCccccEEEEEcCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAH-VATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQR 212 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~h-sa~~~~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~ 212 (975)
..+|.+|+.+.....+.... .+... ....-++ .|++.... ..++++|+.+..
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~----~~~~~~~~~spdg~~l~~~~~~-------~~l~~~d~~~~~ 113 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGK----GDNTFGGFISTDERAFFYVKNE-------LNLMKVDLETLE 113 (396)
T ss_dssp CEEEEEETTTTEEEECCCSS----CBCTTTCEECTTSSEEEEEETT-------TEEEEEETTTCC
T ss_pred ceEEEEECCCCcEEEeecCC----CCccccceECCCCCEEEEEEcC-------CcEEEEECCCCC
Confidence 36899999998887775431 12122 2222234 44444321 269999988753
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.21 E-value=5.3 Score=43.58 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=70.2
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe--CCcEEEEEcCCCCCCCCCcEEEEEC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~--~~~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+++.++.|+. ...+.+||+.+.. .+.. +......-..+.+ .+..+++.|+.++ .|..||+
T Consensus 138 dg~~l~sgs~------d~~i~iwd~~~~~----~~~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 138 SGTQAVSGSK------DICIKVWDLAQQV----VLSS---YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TSSEEEEEET------TSCEEEEETTTTE----EEEE---ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeC------CCeEEEEECCCCc----EEEE---EcCcCCceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 4566777764 3468999998753 2221 1111111122222 2335777777764 5788999
Q ss_pred CCCCcEEEEccCCCCCCCCcceeEEEEE--eCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeE
Q 002047 262 AAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (975)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~ 339 (975)
.+.. .-..+..... .....++.. .++++++.|+.++. +..++........-.. + ....-.++
T Consensus 200 ~~~~-~~~~~~~~~~----~~~~~~~~~~p~~~~~l~sg~~dg~------v~~wd~~~~~~~~~~~--~---h~~~v~~v 263 (344)
T 4gqb_B 200 RCPK-PASQIGCSAP----GYLPTSLAWHPQQSEVFVFGDENGT------VSLVDTKSTSCVLSSA--V---HSQCVTGL 263 (344)
T ss_dssp TSSS-CEEECC--------CCCEEEEEECSSCTTEEEEEETTSE------EEEEESCC--CCEEEE--C---CSSCEEEE
T ss_pred cccc-eeeeeeccee----eccceeeeecCCCCcceEEeccCCc------EEEEECCCCcEEEEEc--C---CCCCEEEE
Confidence 8762 1122211111 011122222 35678888876542 2233322211001011 1 11112233
Q ss_pred EEe-C-CEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
++. + .++++.|+.++ .|.+||..+.+-..
T Consensus 264 ~fsp~g~~~lasgs~D~---------~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDC---------SLAVLDSSLSELFR 294 (344)
T ss_dssp EECSSSSCCEEEEETTS---------CEEEECTTCCEEEE
T ss_pred EEccCCCeEEEEEeCCC---------eEEEEECCCCcEEE
Confidence 333 2 35777777543 37889998886443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=88.74 E-value=26 Score=36.79 Aligned_cols=189 Identities=12% Similarity=0.040 Sum_probs=89.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC-CCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~-~P~~ 227 (975)
..+++||+.+.....+... .+ -.+++.. ++++|+.. .+.+++||+.+.. ++.+..... .+..
T Consensus 35 ~~i~~~d~~~~~~~~~~~~-----~~-~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~--~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMD-----AP-VSSVALRQSGGYVATI--------GTKFCALNWKEQS--AVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEECS-----SC-EEEEEEBTTSSEEEEE--------TTEEEEEETTTTE--EEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEeCC-----Cc-eEEEEECCCCCEEEEE--------CCeEEEEECCCCc--EEEEEecCCCCCCC
Confidence 4789999998876554321 11 1233333 34665542 1468999998763 666543211 1222
Q ss_pred CcccEEEEeCCcEEEEEcCCCC------CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeC-CeEEEecCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDG------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGR 300 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-g~lyvfGG~ 300 (975)
|.. .+++-.++.+|+..-... ......+|++|+... ...+..... .-...+...+ +.||+....
T Consensus 99 ~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~-----~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 99 RFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD-----ISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES-----BEEEEEECTTSCEEEEEEGG
T ss_pred CCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc-----cccceEEcCCCCEEEEecCC
Confidence 222 233333446776421111 122457899988532 332221111 1112222223 457776432
Q ss_pred CCCCCCccceEEeecC-CCCeEE----EEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 301 DASSVPLASAYGLAKH-RDGRWE----WAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~-~~~~W~----w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
...++.|+.. .++... +..... ....-.++++- ++.|||..-. ...|++||+++.+
T Consensus 170 ------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 170 ------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTGK 231 (297)
T ss_dssp ------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTCC
T ss_pred ------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCce
Confidence 2345666532 343332 122211 11111233332 5688876421 2349999999877
Q ss_pred EEEcccC
Q 002047 375 WCDTKSV 381 (975)
Q Consensus 375 W~~v~~~ 381 (975)
....-..
T Consensus 232 ~~~~i~~ 238 (297)
T 3g4e_A 232 RLQTVKL 238 (297)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 6544333
|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
Probab=88.61 E-value=23 Score=39.61 Aligned_cols=63 Identities=17% Similarity=0.055 Sum_probs=34.8
Q ss_pred cccEEEEeCCcEEEEEcCCCC----CCCCCcEEEEE----CCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDG----KRPLADVWALD----TAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g----~~~~ndv~~yD----l~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
..|++++..++.+|.+|-... .....+...-. +... +...+.. ...|+.+...++.+|.+|-.
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE--KMSMVAC-------GWRHTISVSYSGALYTYGWS 252 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTC--CEEEEEE-------CSSEEEEEETTCCEEEEECC
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCc--eEEEEEE-------CCCcEEEEcCCCCEEEeeCC
Confidence 468888888779999995421 11111111110 0001 2222221 24577777889999999853
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=88.54 E-value=29 Score=41.32 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=55.6
Q ss_pred CCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCC
Q 002047 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS 332 (975)
Q Consensus 253 ~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~ 332 (975)
...++++|+.+. +-..+..... ............+++.++++..+... ....++.++..+...+........ +.
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTGEP--KEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCCSC--TTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred eeEEEEEECCCC--ceEeeccCCC--CceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CC
Confidence 357999999988 6555542211 11122233334566655554443322 234566665543313332221111 00
Q ss_pred Cc-ceeeEEEe---CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 333 PR-YQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 333 ~R-~~hs~v~~---~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
.. ....+++. ++++++.+..++ ...+|.+|........+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecC
Confidence 00 01122332 677666665432 356999998777776664
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=88.49 E-value=11 Score=42.07 Aligned_cols=63 Identities=13% Similarity=0.202 Sum_probs=37.8
Q ss_pred eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC
Q 002047 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (975)
Q Consensus 183 ~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~ 262 (975)
.++..++.|+. ...+.+||+.+.. -...- ......-.+..+++ .+++.|+.++ .+.+||+.
T Consensus 141 ~d~~~l~~g~~------dg~i~iwd~~~~~--~~~~~-----~~h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~ 201 (435)
T 1p22_A 141 YDDQKIVSGLR------DNTIKIWDKNTLE--CKRIL-----TGHTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVN 201 (435)
T ss_dssp CCSSEEEEEES------SSCEEEEESSSCC--EEEEE-----CCCSSCEEEEECCS-SEEEEEETTS-----CEEEEESS
T ss_pred ECCCEEEEEeC------CCeEEEEeCCCCe--EEEEE-----cCCCCcEEEEEECC-CEEEEEcCCC-----eEEEEECC
Confidence 35566667764 3579999988754 22111 11222233444555 6777787765 68889998
Q ss_pred CC
Q 002047 263 AK 264 (975)
Q Consensus 263 s~ 264 (975)
+.
T Consensus 202 ~~ 203 (435)
T 1p22_A 202 TG 203 (435)
T ss_dssp SC
T ss_pred CC
Confidence 77
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=88.48 E-value=24 Score=37.28 Aligned_cols=192 Identities=8% Similarity=-0.007 Sum_probs=86.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||+.+..-...-.. ....-.+++.. ++..++.|+. ...+.+||+.+.. ...... ....
T Consensus 55 ~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~--~~~~~~-----~~~~ 117 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDG----HTGTIWSIDVDCFTKYCVTGSA------DYSIKLWDVSNGQ--CVATWK-----SPVP 117 (369)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEET------TTEEEEEETTTCC--EEEEEE-----CSSC
T ss_pred EEEEEeCCCchhhhhhhh----cCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCc--EEEEee-----cCCC
Confidence 678889877654433211 11111222222 3456666664 3579999998764 222221 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCC--cEEEEccCCCC-----CCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP--YEWRKLEPEGE-----GPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~--~~W~~v~~~~~-----~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-.++....++..++.++.+.......+..||+.+.. ..+........ ..........+...++.+++.|+.++
T Consensus 118 v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 118 VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 223333334355565554422223467777765442 12222111100 00000122222334566677766543
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.+..|+............. ....-.++++. ++.+++.|+.+ ..|.+||+.+.+....
T Consensus 198 ------~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 198 ------KISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSRD---------TNSFLVDVSTLQVLKK 255 (369)
T ss_dssp ------EEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEEEE
T ss_pred ------EEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecCC---------ceEEEEECCCCceeee
Confidence 3444544432222211111 11112233333 55666777642 3488999988765443
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=88.43 E-value=5.3 Score=48.10 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=53.6
Q ss_pred cCcEEEEECCCCcEEEecCCCCCC---------------CCc------cceEEEEeCCEEEEEeccCCCCCccccEEEEE
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPP---------------TPR------AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLD 207 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P---------------~pR------~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD 207 (975)
...++.+|+.+.+...+....... ..| ....+..-+++.++++.. ..++++|
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-------~~i~~~d 135 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-------GELYLYD 135 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-------TEEEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-------CcEEEEE
Confidence 458999999999887765321101 000 111112224444444442 6899999
Q ss_pred cCCC---CCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCC
Q 002047 208 LTQQ---RPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (975)
Q Consensus 208 ~~t~---~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~ 274 (975)
+.+. . -..+. .....-...+.-.+++.++++.. +.++++|+.+. +...+...
T Consensus 136 ~~~~~~~~--~~~l~-----~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g--~~~~~~~~ 190 (741)
T 2ecf_A 136 LKQEGKAA--VRQLT-----HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASG--RQMQLTAD 190 (741)
T ss_dssp SSSCSTTS--CCBCC-----CSSSCEEEEEECTTSSEEEEEET------TEEEEEETTTT--EEEECCCC
T ss_pred CCCCCcce--EEEcc-----cCCcccccccCCCCCCEEEEEeC------CcEEEEecCCC--CEEEeccC
Confidence 9875 2 22221 11111122223233344444431 37999999988 77776543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=88.04 E-value=31 Score=41.64 Aligned_cols=180 Identities=11% Similarity=0.056 Sum_probs=83.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||..+......-.. ..... .+++.. ++..++.|+. ...+.+||+.+.. ..... .+ ....
T Consensus 36 ~v~iwd~~~~~~~~~~~~---~~~~v-~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~--~~~~~-~~---~~~~ 99 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQV---TETPV-RAGKFIARKNWIIVGSD------DFRIRVFNYNTGE--KVVDF-EA---HPDY 99 (814)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSCE-EEEEEEGGGTEEEEEET------TSEEEEEETTTCC--EEEEE-EC---CSSC
T ss_pred EEEEEECCCCceEEEEec---CCCcE-EEEEEeCCCCEEEEEeC------CCeEEEEECCCCc--EEEEE-ec---CCCC
Confidence 688899888765443221 11111 222222 4456666664 3578999998764 32221 11 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCcc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l~ 308 (975)
-.+++...++..++.|+.++ .+..||+.+.. .....-.... ......+... ++.+++.|+.++.
T Consensus 100 v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~~~----~~v~~~~~~p~~~~~l~~~~~dg~----- 164 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEGHE----HFVMCVAFNPKDPSTFASGCLDRT----- 164 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEECCS----SCEEEEEEETTEEEEEEEEETTSE-----
T ss_pred EEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcCCC----CcEEEEEEEcCCCCEEEEEeCCCe-----
Confidence 22333333334566666553 67888887641 2222211111 0111222222 5667777775532
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe---CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~---~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++.... .-.+..... ....-..+++. ++.++++|+.+ ..+.+||+.+.+-
T Consensus 165 -v~vwd~~~~-~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 165 -VKVWSLGQS-TPNFTLTTG---QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEETTCS-SCSEEEECC---CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTEE
T ss_pred -EEEEECCCC-cceeEEecC---CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCcE
Confidence 333332221 111111111 11111223332 56677777753 3488899988764
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=88.02 E-value=28 Score=36.38 Aligned_cols=96 Identities=14% Similarity=0.062 Sum_probs=47.2
Q ss_pred cEEEEECC--CCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 151 DVHCYDVL--TNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 151 dv~~yD~~--t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+..|++. +.++..+.... ....-..++.. ++ .||+.+.. ...+++||+.... ....+... +.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~-~~~~~~~~---~~ 127 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESA---LPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGL-PVGVVDVV---EG 127 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEE---CSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTE-EEEEEEEE---CC
T ss_pred eEEEEEecCCCCceeeccccc---cCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCc-cccccccc---cC
Confidence 56667765 77777664331 11122233333 33 56665432 2468888885211 13333221 11
Q ss_pred CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCC-C
Q 002047 227 PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAA-K 264 (975)
Q Consensus 227 ~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s-~ 264 (975)
...-+.++.. +++.||+.+..+ ..+.+||+.+ .
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~ 162 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDG 162 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTS
T ss_pred CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCC
Confidence 1223333333 333677765332 3689999987 5
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=87.98 E-value=32 Score=37.01 Aligned_cols=101 Identities=10% Similarity=0.174 Sum_probs=51.3
Q ss_pred cEEEEECCCCc------EEEecCCCCCCC-CccceEEEEe-----CCEE-EEEeccCCCCCccccEEEEEcCC------C
Q 002047 151 DVHCYDVLTNK------WSRITPFGEPPT-PRAAHVATAV-----GTMV-VIQGGIGPAGLSAEDLHVLDLTQ------Q 211 (975)
Q Consensus 151 dv~~yD~~t~~------W~~l~~~g~~P~-pR~~hsa~~~-----~~~i-yv~GG~~~~~~~~~dv~~yD~~t------~ 211 (975)
.+.+||+.+.. +..+..... .. ...-.+++.. ++.. ++.|+. ...+.+||+.+ .
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDS-DMKKHSFWALKWGASNDRLLSHRLVATDV------KGTTYIWKFHPFADESNS 164 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCT-TGGGSCEEEEEEECCC----CEEEEEEET------TSCEEEEEEESSSSHHHH
T ss_pred CEEEEEccCCcccccccceeeccccc-ccCCCcEEEEEEeeccCCCCceEEEEEeC------CCcEEEEeCCcccccccc
Confidence 57788877766 777654310 00 1222233333 3444 666664 24688888876 3
Q ss_pred C-CcEE---EEEe--cCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 212 R-PRWH---RVVV--QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 212 ~-~~W~---~v~~--~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
. ..|. .+.. .........-.++....++ +++.|+.++ .+..||+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~ 217 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL 217 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC
Confidence 2 1222 1110 0001122223445555565 777776654 6889999877
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=87.85 E-value=19 Score=38.35 Aligned_cols=101 Identities=12% Similarity=0.138 Sum_probs=51.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE---ecCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---VQGPG 224 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~---~~g~~ 224 (975)
..++.||+.+..++.+.... .....-..++.. + ..||+.+.. ...+.+||+.... +...+. ..+..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g-~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADG-ALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTS-CEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCC-CeeecceeecCCCC
Confidence 47889999888877665410 011111223333 3 366666532 2468888885321 233332 22222
Q ss_pred CCCCc----ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC-CC
Q 002047 225 PGPRY----GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA-AK 264 (975)
Q Consensus 225 P~~R~----~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~-s~ 264 (975)
|..|. -+.+++-.++++|+.+..+ +.+++||+. +.
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g 173 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAG 173 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTS
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCC
Confidence 32222 2334444444577765432 478889987 44
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=87.79 E-value=11 Score=38.47 Aligned_cols=198 Identities=8% Similarity=-0.092 Sum_probs=94.8
Q ss_pred cEEEEECCC-CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLT-NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t-~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.++++|+.+ .....+.... ........+..-+++.+++++.... ....+|.+++.+.. ...+. ... .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~--~~~~~---~~~--~- 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT--PRLMT---KNL--P- 130 (297)
T ss_dssp EEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC--CEECC---SSS--S-
T ss_pred eEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc--eEEee---cCC--C-
Confidence 789999998 7777664321 1112222222224455555553222 24678888887653 33332 111 1
Q ss_pred ccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecC-CCCCCCCc
Q 002047 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG-RDASSVPL 307 (975)
Q Consensus 230 ~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG-~~~~~~~l 307 (975)
...+... +++.|++.++.++. ..+|.+|+.+. ....+..... .........+++.+++++ .++ .
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~----~ 196 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHGEG-----RNDGPDYSPDGRWIYFNSSRTG----Q 196 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCSSS-----CEEEEEECTTSSEEEEEECTTS----S
T ss_pred ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccCCC-----ccccceECCCCCEEEEEecCCC----C
Confidence 2222333 34356555554432 37888888777 6665543322 222233334565444443 332 3
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCcc--ccCCcEEEEECCCCeEEEccc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV--EDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~--~~~~dv~~yD~~t~~W~~v~~ 380 (975)
..+|.++.... . ....... .......++. +++.+++++........ .....++++|+.+.+...+..
T Consensus 197 ~~i~~~~~~~~-~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS-S--VERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS-C--EEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC-C--cEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 45666654333 1 2222211 1111222222 45555555543221100 012569999999987766554
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=87.68 E-value=21 Score=39.55 Aligned_cols=93 Identities=13% Similarity=0.149 Sum_probs=51.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
+.|+++|..+++...+-... .....-.++.+ ++.+++.|+. ...+.+||+.+.. .+.. +...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~------Dg~v~iWd~~~~~----~~~~---~~~h 188 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTS------SAEVQLWDVQQQK----RLRN---MTSH 188 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE----EEEE---ECCC
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEEC------CCeEEEEEcCCCc----EEEE---EeCC
Confidence 47899999998876654321 11111122222 4466777764 3568999998753 2221 1111
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.....+...++ .+++.|+.++ .++.+|....
T Consensus 189 ~~~v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 189 SARVGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp SSCEEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred CCceEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 22233344555 5777777654 5677777654
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=87.65 E-value=49 Score=38.76 Aligned_cols=82 Identities=11% Similarity=0.025 Sum_probs=46.3
Q ss_pred CEEEEEeccC---------CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe----CCc--EEEEEcCCCC
Q 002047 185 TMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIGGNDG 249 (975)
Q Consensus 185 ~~iyv~GG~~---------~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~----~~~--~lyV~GG~~g 249 (975)
+.||+..|.. .+..+...++.+|+.+....|+.-........-......+++ +++ ++++++..++
T Consensus 247 g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G 326 (571)
T 2ad6_A 247 NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG 326 (571)
T ss_dssp TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS
T ss_pred CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc
Confidence 5777765531 122234579999999887779865421111111111122222 332 3666665543
Q ss_pred CCCCCcEEEEECCCCCcEEEEc
Q 002047 250 KRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 250 ~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.++++|..+....|..-
T Consensus 327 -----~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 327 -----ILYTLNRENGNLIVAEK 343 (571)
T ss_dssp -----EEEEEETTTCCEEEEEE
T ss_pred -----EEEEEECCCCCEEeeec
Confidence 68999999887788753
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=87.61 E-value=0.22 Score=55.15 Aligned_cols=26 Identities=12% Similarity=0.303 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCeEEEEeccccccc
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMDG 909 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G 909 (975)
.+.+...|+++++++++-||.-..+-
T Consensus 214 ~~~l~~ll~~~~VdlvlsGH~H~~~~ 239 (342)
T 3tgh_A 214 AYYLLPLLKDAEVDLYISGHDNNMEV 239 (342)
T ss_dssp HHHTHHHHHHTTCCEEEECSSSSEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCcceeE
Confidence 35678899999999999999866443
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.23 E-value=33 Score=36.39 Aligned_cols=149 Identities=15% Similarity=0.189 Sum_probs=75.0
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..+++.|+. ...+.+||+.+.. .-..+. .+ + ..-.+++...++..++.|+.++ .+..||+.+.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~-~~~~~~-~~--~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~ 154 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGK-QIKSID-AG--P--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESG 154 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTE-EEEEEE-CC--T--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTC
T ss_pred CCEEEEEeC------CCcEEEEECCCCC-EEEEEe-CC--C--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCC
Confidence 356666664 3578899998753 122222 11 1 1122344444446777777654 6788888876
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-C
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~ 343 (975)
...+..... . ......+...++++++.|+.++. +..++.... .-... ..+. ...-.++++. +
T Consensus 155 ~~~~~~~~~-~-----~~v~~~~~spdg~~lasg~~dg~------i~iwd~~~~-~~~~~-~~~h---~~~v~~l~~spd 217 (321)
T 3ow8_A 155 KKEYSLDTR-G-----KFILSIAYSPDGKYLASGAIDGI------INIFDIATG-KLLHT-LEGH---AMPIRSLTFSPD 217 (321)
T ss_dssp SEEEEEECS-S-----SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEE-ECCC---SSCCCEEEECTT
T ss_pred ceeEEecCC-C-----ceEEEEEECCCCCEEEEEcCCCe------EEEEECCCC-cEEEE-Eccc---CCceeEEEEcCC
Confidence 333322111 1 12223333457788888876542 333433322 21111 1111 1111123332 5
Q ss_pred CEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+.+++.|+.++ .|.+||+.+....
T Consensus 218 ~~~l~s~s~dg---------~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 218 SQLLVTASDDG---------YIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEECTTS---------CEEEEETTTCCEE
T ss_pred CCEEEEEcCCC---------eEEEEECCCccee
Confidence 67888887543 3888999877643
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=87.07 E-value=0.34 Score=57.04 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=43.1
Q ss_pred cCCEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh----------HHH
Q 002047 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS----------LET 750 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s----------~ev 750 (975)
+.+|+.++|+||.+. .|..+++.+.-... ..-+|..||.+++.+.+ ..+
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~ 93 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPL 93 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence 346899999999863 56666666532211 11345579999987543 355
Q ss_pred HHHHHHhhhcCCCCEEEEeccccc
Q 002047 751 ITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
+.+|-.+. --++..||||.
T Consensus 94 ~~~ln~lg-----~D~~t~GNHef 112 (527)
T 3qfk_A 94 VDFYNRMA-----FDFGTLGNHEF 112 (527)
T ss_dssp HHHHHHTC-----CCEECCCGGGG
T ss_pred HHHHHhcC-----CcEEecccccc
Confidence 66665552 22456899995
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.92 E-value=20 Score=38.79 Aligned_cols=99 Identities=11% Similarity=0.086 Sum_probs=49.4
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCC-----------CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEE
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPT-----------PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR 217 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~-----------pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~ 217 (975)
-..+..||+.+......-.....+. ...-.+++...+..++.|+. ...+++||+.+..... .
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~i~~~d~~~~~~~~-~ 242 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------KGAIFVYQITEKTPTG-K 242 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG------GGCEEEEETTCSSCSE-E
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------CCeEEEEEcCCCceee-e
Confidence 3568889988776544332211110 00022233333334555554 3579999998764222 2
Q ss_pred EEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 218 v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+. .....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 243 ~~-----~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~ 279 (425)
T 1r5m_A 243 LI-----GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNG 279 (425)
T ss_dssp EC-----CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSB
T ss_pred ec-----cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 21 1111122333443445666776554 5888888765
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=86.67 E-value=0.29 Score=57.40 Aligned_cols=72 Identities=21% Similarity=0.123 Sum_probs=42.3
Q ss_pred cCCEEEEecCCCCHH----------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHHHHhhhcC
Q 002047 697 KAPIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLLLALKVEY 761 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~----------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~lk~~~ 761 (975)
..+|+.++|+||.+. .+..+++.+.-.... .....-+|..||+++..+. ...++.+|-.|.
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~-~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg--- 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAA-EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG--- 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHH-HTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhc-cCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---
Confidence 356899999999853 455555544210000 0000146779999976542 235566666653
Q ss_pred CCCEEEEeccccc
Q 002047 762 PNNVHLIRGNHEA 774 (975)
Q Consensus 762 P~~v~llrGNHE~ 774 (975)
-.++..||||.
T Consensus 84 --~d~~~~GNHEf 94 (516)
T 1hp1_A 84 --YDAMAIGNHEF 94 (516)
T ss_dssp --CCEEECCGGGG
T ss_pred --CCEEeeccccc
Confidence 23677899997
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=86.40 E-value=24 Score=36.95 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=47.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..-...-.. ..... .++... ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 36 ~v~lWd~~~~~~~~~~~~---~~~~v-~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQV---TETPV-RAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSCE-EEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred cEEEEECCCCceeEEeec---cCCcE-EEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 677888887654332111 01111 122222 4456666664 3578999998763 222222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333334445777777665 5777887654
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.24 E-value=40 Score=36.30 Aligned_cols=180 Identities=8% Similarity=-0.003 Sum_probs=82.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC----
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP---- 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P---- 225 (975)
.+..||........+... ...-.+++.. ++..++.|+. ...+.+||+.+.. ..........+
T Consensus 131 ~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~--~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 131 ELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDV------ENVTILWNVISGT--VMQHFELKETGGSSI 197 (425)
T ss_dssp CEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEET------TCCEEEEETTTTE--EEEEECCC-------
T ss_pred eEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEec------CCeEEEEECCCCc--EEEEeeccccCccce
Confidence 577788555444444322 1112223332 3455555554 3468899997753 22211000000
Q ss_pred -------CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEec
Q 002047 226 -------GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (975)
Q Consensus 226 -------~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfG 298 (975)
....-.+++...++ .++.|+.+ ..+..||+.+......... .. ..........++.+++.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----g~i~~~d~~~~~~~~~~~~-~~-----~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPK-----GAIFVYQITEKTPTGKLIG-HH-----GPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGG-----GCEEEEETTCSSCSEEECC-CS-----SCEEEEEEETTTTEEEEE
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCC-----CeEEEEEcCCCceeeeecc-CC-----CceEEEEECCCCCEEEEE
Confidence 00002333334443 56666655 3689999987632222211 11 122233344466777777
Q ss_pred CCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 299 G~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+.++. +..++.... ....... .....-.++++. ++ +++.|+.+ ..+.+||+.+.+-.
T Consensus 266 ~~d~~------i~i~d~~~~-~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d---------~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 266 SDDGT------LRIWHGGNG-NSQNCFY----GHSQSIVSASWVGDD-KVISCSMD---------GSVRLWSLKQNTLL 323 (425)
T ss_dssp ETTSC------EEEECSSSB-SCSEEEC----CCSSCEEEEEEETTT-EEEEEETT---------SEEEEEETTTTEEE
T ss_pred cCCCE------EEEEECCCC-ccceEec----CCCccEEEEEECCCC-EEEEEeCC---------CcEEEEECCCCcEe
Confidence 75432 233332221 1111111 111222334444 44 66666643 34889999887643
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=85.91 E-value=37 Score=36.30 Aligned_cols=99 Identities=7% Similarity=0.065 Sum_probs=48.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+|.+|..+.+++.+... ....|+ .++.. +..||+.+..+. ....+.+|++...+.+.+.+..... ...
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~---~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~--~~~ 100 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPS---YLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKT--MGA 100 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCC---SEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEEC--SSS
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCc---eEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEecc--CCC
Confidence 456678888888776543 111222 12222 335666654311 1245666665543224555542110 111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.-+..+. +++.||+....+ ..+.+||+...
T Consensus 101 ~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 101 DPCYLTT-NGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp CEEEEEE-CSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred CcEEEEE-CCCEEEEEECCC-----CEEEEEEeCCC
Confidence 1222223 665777765432 46788888643
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=85.86 E-value=30 Score=38.51 Aligned_cols=173 Identities=13% Similarity=0.058 Sum_probs=84.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.+-...-.. .. ..-.+++.. ++..++.|+. ...+.+||+.+.. .+.. +....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~---~~-~~v~~~~~~~~~~~l~sg~~------dg~i~vwd~~~~~----~~~~---~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG---HT-DRIYSTIYDHERKRCISASM------DTTIRIWDLENGE----LMYT---LQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC---CS-SCEEEEEEETTTTEEEEEET------TSCEEEEETTTTE----EEEE---ECCCS
T ss_pred CeEEEEECCCCcEEEEecC---CC-CCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCc----EEEE---EeCCC
Confidence 3688899887654333211 11 112223333 3455666664 3569999998753 2221 11122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
..-..+.+.+ ..++.|+.++ .+..||+.+....+... .. ......+...++.+++.|+ ++
T Consensus 353 ~~v~~~~~~~-~~l~s~s~dg-----~v~vwd~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~l~~~~-dg------ 412 (464)
T 3v7d_B 353 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDYSRKFSYH--HT-----NLSAITTFYVSDNILVSGS-EN------ 412 (464)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEE--CT-----TCCCEEEEEECSSEEEEEE-TT------
T ss_pred CcEEEEEEcC-CEEEEEeCCC-----cEEEEECCCCceeeeec--CC-----CCccEEEEEeCCCEEEEec-CC------
Confidence 2234445555 5667777664 58889998763233221 11 1223344455777777776 22
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEEC
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~ 370 (975)
.+..++..+. + .....- .+....-.++++.++.+++.|+.++ ..-++++|.
T Consensus 413 ~i~iwd~~~g-~--~~~~~~-~~~~~~v~~v~~~~~~l~~~~~~~g-------~~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSG-K--LVHANI-LKDADQIWSVNFKGKTLVAAVEKDG-------QSFLEILDF 463 (464)
T ss_dssp EEEEEETTTC-C--EEESCT-TTTCSEEEEEEEETTEEEEEEEETT-------EEEEEEEEC
T ss_pred eEEEEECCCC-c--EEehhh-ccCCCcEEEEEecCCEEEEEEEeCC-------eEEEEEeec
Confidence 2444443333 2 222111 1122223344455666666665433 223677775
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=85.50 E-value=39 Score=35.53 Aligned_cols=110 Identities=6% Similarity=-0.060 Sum_probs=57.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+++||+.+.++..+... ....-++++.. ++++|+...... .....+++||+.+.. ...+.. ......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~--~~~~~~--~~~~~~ 135 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDN--LQDIIE--DLSTAY 135 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCS--CEEEEC--SSSSCC
T ss_pred CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCE--EEEEEc--cCccCC
Confidence 3689999998888776421 11223344443 457777653211 112479999988763 332221 111122
Q ss_pred cccEEEEeCCcEEEEEcCCC-CCCCCCcEEEEECCCCCcEEEEc
Q 002047 229 YGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.-..+++..++.+|+..... .......+|+||+.+. +...+
T Consensus 136 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 177 (333)
T 2dg1_A 136 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPI 177 (333)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC--CEEEE
T ss_pred cccceEECCCCCEEEEeccccccCCCceEEEEeCCCC--EEEEe
Confidence 22233344444688754321 1122457999999876 44443
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=85.48 E-value=65 Score=38.05 Aligned_cols=83 Identities=8% Similarity=-0.003 Sum_probs=46.5
Q ss_pred CCEEEEEeccC---------CCCCccccEEEEEcCCCCCcEEEEEecCCCCC--CCcccEEEEe---CCc--EEEEEcCC
Q 002047 184 GTMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG--PRYGHVMALV---GQR--YLMAIGGN 247 (975)
Q Consensus 184 ~~~iyv~GG~~---------~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~--~R~~h~~~~~---~~~--~lyV~GG~ 247 (975)
.+.||+.-|.. ....+.+.++.+|+.+...+|+.-......-. .-.....+-. +++ .+++.+..
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECT
T ss_pred CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECC
Confidence 45777765532 12234568999999998778986532111100 0011122221 221 45665554
Q ss_pred CCCCCCCcEEEEECCCCCcEEEEc
Q 002047 248 DGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 248 ~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
++ .++++|..+....|..-
T Consensus 332 ~G-----~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 332 NG-----IVYTLDRTDGALVSANK 350 (599)
T ss_dssp TS-----EEEEEETTTCCEEEEEE
T ss_pred Cc-----EEEEEECCCCCEeeccc
Confidence 43 68999998887788653
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.24 E-value=40 Score=35.42 Aligned_cols=136 Identities=10% Similarity=0.073 Sum_probs=60.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCc--EEEEEecC----
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPR--WHRVVVQG---- 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~--W~~v~~~g---- 222 (975)
..+..||+.+.+....... +. .-.+++.. ++..++.++.. .......+.+||+.+.... +.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~---~~--~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKS---PV--PVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TEEEEEETTTCCEEEEEEC---SS--CEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CeEEEEECCCCcEEEEeec---CC--CeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 3688899887765444322 11 11222222 34555555432 1112357888887654211 22111000
Q ss_pred -CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCC
Q 002047 223 -PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 223 -~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
.......-.+++...++.+++.|+.++ .+..||+.+..-....+..... .........++.+++.|+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecCC
Confidence 000000122222223335666676554 6899999872112222222111 22223333466777777654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=85.13 E-value=19 Score=43.55 Aligned_cols=182 Identities=10% Similarity=0.039 Sum_probs=86.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+.+||..++.....-.. ....-.+++.. ++..++.|+. ...+.+||+.+. |........ ...
T Consensus 77 g~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~---~~~~~~~~~--~~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTFEG--HEH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT---SEEEEEEEC--CSS
T ss_pred CeEEEEECCCCcEEEEEec----CCCCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC---ceEEEEEcC--CCC
Confidence 3688899888776443221 11111222222 3445556653 346889999875 333321111 111
Q ss_pred cccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe--CCeEEEecCCCCCCC
Q 002047 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (975)
Q Consensus 229 ~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~g~lyvfGG~~~~~~ 305 (975)
.-.+++... ++.+++.|+.++ .+..||+.+....+........ ......... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEEEeCCC---
Confidence 112233333 446777777664 6889998765333333322111 111222222 677777777543
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
.+..++.... .-.... .+ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-.
T Consensus 209 ---~i~~~d~~~~-~~~~~~-~~---~~~~v~~~~~~~~~~~l~~~~~dg---------~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVATL-EG---HMSNVSFAVFHPTLPIIISGSEDG---------TLKIWNSSTYKVE 263 (814)
T ss_dssp ---EEEEEETTTT-EEEEEE-EC---CSSCEEEEEECSSSSEEEEEETTS---------CEEEEETTTCSEE
T ss_pred ---EEEEEECCCC-cEEEEE-cC---CCCCEEEEEEcCCCCEEEEEeCCC---------eEEEEECCCCcEE
Confidence 2344433322 211111 11 11111222233 456777777533 3788888876543
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=85.09 E-value=20 Score=43.12 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=71.6
Q ss_pred EEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC--CCCC---CcccEEEEeCCcEEEEEcCCCCCCCCC
Q 002047 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP--GPGP---RYGHVMALVGQRYLMAIGGNDGKRPLA 254 (975)
Q Consensus 180 a~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~--~P~~---R~~h~~~~~~~~~lyV~GG~~g~~~~n 254 (975)
-++.++.||+... .+.++.+|..+....|+.-..... .+.. ....+.++.++ .||+... -.
T Consensus 73 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~v~v~~~------dg 138 (677)
T 1kb0_A 73 PVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG-KVYVGAW------DG 138 (677)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT-EEEEECT------TS
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECC-EEEEEcC------CC
Confidence 3557889998865 357999999987667986541110 0000 11123444555 7887532 24
Q ss_pred cEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC-CeEEEEE
Q 002047 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAI 325 (975)
Q Consensus 255 dv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~-~~W~w~~ 325 (975)
.++.+|..+....|+.-..... +.......+-++.++++|+..+... ...-..++.|+..+. ..|++..
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQ-KGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTC-CSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEEeeecCCcCc-CcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEecc
Confidence 6999999998889987543110 0111122233456888877544222 112345677765432 2455443
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=85.05 E-value=49 Score=36.40 Aligned_cols=94 Identities=18% Similarity=0.157 Sum_probs=46.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+.+||+.+.+-...... ... ...+...++.+++.|+. ...++++|.......-..+. +. ...
T Consensus 169 g~v~iWd~~~~~~~~~~~~---h~~--~v~~~s~~~~~l~sgs~------d~~i~~~d~~~~~~~~~~~~--~h---~~~ 232 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTS---HSA--RVGSLSWNSYILSSGSR------SGHIHHHDVRVAEHHVATLS--GH---SQE 232 (420)
T ss_dssp SCEEEEETTTTEEEEEECC---CSS--CEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--CC---SSC
T ss_pred CeEEEEEcCCCcEEEEEeC---CCC--ceEEEeeCCCEEEEEeC------CCceeEeeecccceeeEEec--cc---ccc
Confidence 4688899888764333221 111 22334445666777764 35678888776531112221 11 111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.......++..++.|+.++ .+..+|..+.
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred eeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 11222222335666666554 4667777654
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.97 E-value=49 Score=40.17 Aligned_cols=188 Identities=11% Similarity=0.007 Sum_probs=98.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC--CCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g--~~P~ 226 (975)
.-+++||+.+.+++.+...+ .....-.+++.. ++.|++... .-+++||..+.. |....... .++.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~--~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~--~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK--NELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKK--VIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT--TCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSS--CCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC--CCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCe--EEecccCccccccc
Confidence 57888999888888875321 111222333333 347766421 358999998764 66654221 1111
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~ 306 (975)
. .-.+++.-.++.||+..-. .-+++||+.+. +|+........|.. ...+.+.-.++.||+...
T Consensus 495 ~-~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~T~------- 557 (781)
T 3v9f_A 495 N-FVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCSN-TINQIYRSSKGQMWLATG------- 557 (781)
T ss_dssp S-CEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSCS-CEEEEEECTTSCEEEEET-------
T ss_pred c-eeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCCC-eeEEEEECCCCCEEEEEC-------
Confidence 1 1123333334467775321 24899999988 88776543222211 112222224678888532
Q ss_pred ccce-EEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 307 LASA-YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 307 l~d~-~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.-+ +.|+.... ++.......-.|.... .+++.- ++.||+.+. +.+.+||+++.++.....
T Consensus 558 -~Glv~~~d~~~~-~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 558 -EGLVCFPSARNF-DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDH 619 (781)
T ss_dssp -TEEEEESCTTTC-CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECG
T ss_pred -CCceEEECCCCC-cEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEecc
Confidence 123 55554433 4443332211222222 333333 467877531 238899999999887654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=84.88 E-value=30 Score=41.19 Aligned_cols=160 Identities=12% Similarity=0.029 Sum_probs=72.4
Q ss_pred cccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
...++++|+.+.. -..+.. + .....+-..++...+++.++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQT-G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTE--EEECCC-C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCCc--eEeecc-C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 4679999998753 333221 0 011122222333333344444444433345689999997751 3333321111000
Q ss_pred CcceeEEEEEe--CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceee-EEEe-C-CEEEEEcCcCC
Q 002047 280 PCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA-AVFV-N-ARLHVSGGALG 354 (975)
Q Consensus 280 ~r~~~~a~~~~--~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs-~v~~-~-~~L~V~GG~~~ 354 (975)
........... ++++++.+..++ ...+|.++.... . ...+... ...... .++. + ..||+.+..++
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~-~--~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR-L--IRQVTKG---EWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC-E--EEECCCS---SSCEEEEEEECTTSSEEEEEESSSC
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC-E--EEecCCC---CeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00011223334 677666665443 355777763322 2 2233221 111112 2222 3 45666554322
Q ss_pred CCCccccCCcEEEEECCCCeEEEcc
Q 002047 355 GGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 355 ~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
.. ...||.+|+.+.....+.
T Consensus 379 ~~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 379 PL-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TT-----CBEEEEEETTCCCCEESC
T ss_pred Cc-----eEEEEEEEcCCCCceecc
Confidence 11 346999999888755543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=84.88 E-value=16 Score=39.40 Aligned_cols=201 Identities=10% Similarity=-0.033 Sum_probs=92.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+|.+|+.+.....+... +.......+..-++ .|++... ..+++++|+.+.. -..+. ..|...
T Consensus 60 ~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~--~~~~~---~~~~~~ 124 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEG---RGDNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLE--ENVVY---QVPAEW 124 (388)
T ss_dssp CEEEEEETTTCEEEECCCS---SCBCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCC--EEEEE---ECCTTE
T ss_pred ceEEEEeCCCCceEEeeeC---CCCCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCc--ceeee---echhhc
Confidence 3799999999988887643 22111112223344 4544432 1479999998864 33333 223322
Q ss_pred cccEEEE-eCCcEEEEEcCCC-----------------CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe
Q 002047 229 YGHVMAL-VGQRYLMAIGGND-----------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290 (975)
Q Consensus 229 ~~h~~~~-~~~~~lyV~GG~~-----------------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~ 290 (975)
....... -.++.+++.--.. .......++++|+.+. +-..+..... .........
T Consensus 125 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~~~~~~~sp 197 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQENQ-----WLGHPIYRP 197 (388)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEESS-----CEEEEEEET
T ss_pred ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecCCc-----cccccEECC
Confidence 2212111 1222232210000 0112368999999887 5444432211 223333444
Q ss_pred -CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCE-EEEEcCcCCCCCccccCCcEEE
Q 002047 291 -DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAV 367 (975)
Q Consensus 291 -~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~-L~V~GG~~~~~~~~~~~~dv~~ 367 (975)
+++.++|............+|.++.... . ...+.... ........++. +++ |+......+. . ...|++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~--~~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~-~----~~~l~~ 268 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT-N--MRKVKTHA-EGESCTHEFWVPDGSALVYVSYLKGS-P----DRFIYS 268 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC-C--CEESCCCC-TTEEEEEEEECTTSSCEEEEEEETTC-C----CEEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC-c--eEEeeeCC-CCcccccceECCCCCEEEEEecCCCC-C----cceEEE
Confidence 5555444333222222456777765433 1 12222111 11111122222 444 4333222111 0 124999
Q ss_pred EECCCCeEEEcccC
Q 002047 368 LDTAAGVWCDTKSV 381 (975)
Q Consensus 368 yD~~t~~W~~v~~~ 381 (975)
+|+++.+-..+...
T Consensus 269 ~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 269 ADPETLENRQLTSM 282 (388)
T ss_dssp ECTTTCCEEEEEEE
T ss_pred EecCCCceEEEEcC
Confidence 99999987666544
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=84.11 E-value=31 Score=35.42 Aligned_cols=176 Identities=7% Similarity=-0.023 Sum_probs=79.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..-...... . ...-.+++.. ++.+++.|+. ...+.+|++.... ....+. .+.....
T Consensus 40 ~v~vw~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~-~~~~~~---~~~~~~~ 105 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYT---G-QGFLNSVCYDSEKELLLFGGK------DTMINGVPLFATS-GEDPLY---TLIGHQG 105 (313)
T ss_dssp EEEEEEESSSEEEEEEEE---C-SSCEEEEEEETTTTEEEEEET------TSCEEEEETTCCT-TSCC-C---EECCCSS
T ss_pred cEEEEECCCCEEEEEeec---C-CccEEEEEECCCCCEEEEecC------CCeEEEEEeeecC-CCCccc---chhhccc
Confidence 678888877654433221 1 1112223333 4466666664 2467888876542 111111 1111222
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
.-....+.+ .+++.|+.++ .+..||.... .+...... . .....+....++..++.|+.++.
T Consensus 106 ~i~~~~~~~-~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~-~----~v~~~~~~~~~~~~l~~~~~d~~------ 166 (313)
T 3odt_A 106 NVCSLSFQD-GVVISGSWDK-----TAKVWKEGSL--VYNLQAHN-A----SVWDAKVVSFSENKFLTASADKT------ 166 (313)
T ss_dssp CEEEEEEET-TEEEEEETTS-----EEEEEETTEE--EEEEECCS-S----CEEEEEEEETTTTEEEEEETTSC------
T ss_pred CEEEEEecC-CEEEEEeCCC-----CEEEEcCCcE--EEecccCC-C----ceeEEEEccCCCCEEEEEECCCC------
Confidence 223334455 4666676654 5777883332 33222211 1 12222223326667777775543
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEE-eCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~-~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++.. . -. ...... ....-.++++ -++. ++.|+.+ ..+.+||+.+.+-
T Consensus 167 i~i~d~~-~--~~-~~~~~~--~~~~i~~~~~~~~~~-~~~~~~d---------g~i~i~d~~~~~~ 217 (313)
T 3odt_A 167 IKLWQND-K--VI-KTFSGI--HNDVVRHLAVVDDGH-FISCSND---------GLIKLVDMHTGDV 217 (313)
T ss_dssp EEEEETT-E--EE-EEECSS--CSSCEEEEEEEETTE-EEEEETT---------SEEEEEETTTCCE
T ss_pred EEEEecC-c--eE-EEEecc--CcccEEEEEEcCCCe-EEEccCC---------CeEEEEECCchhh
Confidence 3333311 1 11 111111 1122223333 3566 6666643 3488999987653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=83.63 E-value=26 Score=38.17 Aligned_cols=96 Identities=11% Similarity=0.021 Sum_probs=49.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++.+++.|+. ...+.+||+.+.. ..... ......-.+++...++.+++.|+.++ .+..||+.+
T Consensus 108 ~~~~l~~~~~------dg~i~iwd~~~~~----~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTT------EGDIKVLDSNFNL----QREID--QAHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEET------TSCEEEECTTSCE----EEEET--TSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEEC------CCCEEEEeCCCcc----eeeec--ccccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 4567777764 3568999987642 22211 01112222333333445677777654 688999877
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
...... +.... ..........++.+++.|+.++
T Consensus 171 ~~~~~~-~~~h~-----~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 171 GSNPRT-LIGHR-----ATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp CCCCEE-EECCS-----SCEEEEEEETTTTEEEEEETTS
T ss_pred CcCceE-EcCCC-----CcEEEEEEcCCCCEEEEEcCCC
Confidence 622211 11111 1122233344677777777654
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=83.34 E-value=42 Score=34.99 Aligned_cols=18 Identities=17% Similarity=0.130 Sum_probs=13.9
Q ss_pred cEEEEECCCCeEEEcccC
Q 002047 364 SVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 364 dv~~yD~~t~~W~~v~~~ 381 (975)
.+|.+|+++.++..+...
T Consensus 302 ~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 302 SVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCceeeEcccc
Confidence 366669999999888765
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.32 E-value=17 Score=39.13 Aligned_cols=163 Identities=12% Similarity=0.104 Sum_probs=78.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++.+++.||. ...+.+||+.+.. |........ .....-.+++...++.+++.|+.++ .+..+|..+
T Consensus 27 ~g~~las~~~------D~~i~iw~~~~~~--~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGG------DRRIRIWGTEGDS--WICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEET------TSCEEEEEEETTE--EEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECC
T ss_pred CCCEEEEEcC------CCeEEEEEcCCCc--ceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccC
Confidence 3466667764 3468888887753 543321100 1111112222223446777777665 466777766
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~- 342 (975)
. .+..+...... ...........++.+++.|+.++. -.+|.+. ....+........ ....-.++++.
T Consensus 93 ~--~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~s~D~~----v~iwd~~--~~~~~~~~~~~~~--h~~~v~~~~~~p 160 (345)
T 3fm0_A 93 D--DFECVTTLEGH--ENEVKSVAWAPSGNLLATCSRDKS----VWVWEVD--EEDEYECVSVLNS--HTQDVKHVVWHP 160 (345)
T ss_dssp C---EEEEEEECCC--SSCEEEEEECTTSSEEEEEETTSC----EEEEEEC--TTSCEEEEEEECC--CCSCEEEEEECS
T ss_pred C--CeEEEEEccCC--CCCceEEEEeCCCCEEEEEECCCe----EEEEECC--CCCCeEEEEEecC--cCCCeEEEEECC
Confidence 6 55443322110 011122223346778888876643 2233332 2222221111100 11111122222
Q ss_pred CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
++.+++.|+.++ .+.+||..+..|..+..+
T Consensus 161 ~~~~l~s~s~d~---------~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 161 SQELLASASYDD---------TVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SSSCEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCC---------cEEEEEecCCCEEEEEEe
Confidence 456777777543 377889889888765544
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.95 E-value=45 Score=37.13 Aligned_cols=154 Identities=13% Similarity=0.023 Sum_probs=72.1
Q ss_pred EEEEEeccCCCCCccccEEEEEcC--CCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLT--QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~--t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
.|++.|+. ...+.+||+. +.. .-..+... ..+..-.+++...++..++.|+.+ ..++.||+.+
T Consensus 116 ~l~~~~~~------dg~v~iwd~~~~~~~-~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~ 180 (450)
T 2vdu_B 116 RLIACADS------DKSLLVFDVDKTSKN-VLKLRKRF---CFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINS 180 (450)
T ss_dssp EEEEEEGG------GTEEEEEEECSSSSS-CEEEEEEE---ECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTS
T ss_pred EEEEEECC------CCeEEEEECcCCCCc-eeeeeecc---cCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Confidence 55677774 3568899987 432 12222210 011111233333333566666543 3678888876
Q ss_pred CCcEEEE--ccCCCCCCCCcceeEEEEEeC---CeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceee
Q 002047 264 KPYEWRK--LEPEGEGPPPCMYATASARSD---GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA 338 (975)
Q Consensus 264 ~~~~W~~--v~~~~~~P~~r~~~~a~~~~~---g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs 338 (975)
. .... +..... ............+ +++++.|+.++. +..++.... ........+. ... -.+
T Consensus 181 ~--~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d~~------i~vwd~~~~-~~~~~~~~~h--~~~-v~~ 246 (450)
T 2vdu_B 181 I--PEEKFTQEPILG--HVSMLTDVHLIKDSDGHQFIITSDRDEH------IKISHYPQC-FIVDKWLFGH--KHF-VSS 246 (450)
T ss_dssp C--CCSSCCCCCSEE--CSSCEEEEEEEECTTSCEEEEEEETTSC------EEEEEESCT-TCEEEECCCC--SSC-EEE
T ss_pred c--ccccccceeeec--ccCceEEEEEcCCCCCCcEEEEEcCCCc------EEEEECCCC-ceeeeeecCC--CCc-eEE
Confidence 5 2111 000000 0011222334456 778888886532 333332222 1121112111 111 122
Q ss_pred EEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 339 AVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 339 ~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+++.++.+++.|+.+ ..|.+||+.+.+...
T Consensus 247 ~~~sd~~~l~s~~~d---------~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 247 ICCGKDYLLLSAGGD---------DKIFAWDWKTGKNLS 276 (450)
T ss_dssp EEECSTTEEEEEESS---------SEEEEEETTTCCEEE
T ss_pred EEECCCCEEEEEeCC---------CeEEEEECCCCcEee
Confidence 222267777787743 348899999886544
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=82.39 E-value=51 Score=36.31 Aligned_cols=123 Identities=11% Similarity=0.087 Sum_probs=59.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||..+......-.. .. ..-.+++.. ++.+++.|+. ...+.+||+.+.. .+. .+.....
T Consensus 131 ~i~vwd~~~~~~~~~l~~---h~-~~V~~v~~~~~~~~l~sgs~------D~~i~iwd~~~~~----~~~---~~~~h~~ 193 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKG---HT-DSVQDISFDHSGKLLASCSA------DMTIKLWDFQGFE----CIR---TMHGHDH 193 (410)
T ss_dssp CEEEEETTTCCCCEEECC---CS-SCEEEEEECTTSSEEEEEET------TSCCCEEETTSSC----EEE---CCCCCSS
T ss_pred eEEEEECCCCcEEEEEec---cC-CcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCc----eeE---EEcCCCC
Confidence 677888877653322111 01 111122222 3467777775 2457788887642 232 1221111
Q ss_pred cc-EEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEE-ccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h-~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.- +++...++..++.|+.++ .+..||+.+. .-.. +..... .........++.+++.|+.++
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~--~~~~~~~~h~~-----~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTG--YCVKTFTGHRE-----WVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----EEEEEETTTC--CEEEEEECCSS-----CEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCC--cEEEEEeCCCc-----cEEEEEECCCCCEEEEEcCCC
Confidence 22 222333335667777664 6888999876 3222 111111 111222334667777777654
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=82.17 E-value=51 Score=40.05 Aligned_cols=189 Identities=6% Similarity=0.008 Sum_probs=96.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC---CCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g---~~P 225 (975)
.-+++||+.+++++.+...........-.+++.. ++.|++... +-+++||+.+. +|+...... .++
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQR--SFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTT--EEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCC--eEEEccccccccccC
Confidence 5788999999888887542110011112223322 346666432 24889998876 477664220 111
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCC-CCcceeEEEEE-eCCeEEEecCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP-PPCMYATASAR-SDGLLLLCGGRDAS 303 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P-~~r~~~~a~~~-~~g~lyvfGG~~~~ 303 (975)
... -.+++.-.++.||+... .-+++||+.+. ++ ......... .+.....+... .++.||+...
T Consensus 497 ~~~-i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 497 SKQ-ITTLFRDSHKRLWIGGE-------EGLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp CCC-EEEEEECTTCCEEEEES-------SCEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES----
T ss_pred Cce-EEEEEECCCCCEEEEeC-------CceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC----
Confidence 111 12222333446887543 24899999888 77 443211111 01111222222 4678888532
Q ss_pred CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.-++.|+.... .++........|... -.+++.- ++.|++.+. +.+.+||+++.++.....
T Consensus 562 ----~Gl~~~d~~~~-~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 562 ----EGFYCFNEKDK-QIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp ----SCEEEEETTTT-EEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECG
T ss_pred ----CCceeECCCCC-cEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCC
Confidence 13566765543 444332221122222 2333333 467877542 238899999999887654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.16 E-value=67 Score=35.63 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=35.1
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+++.|+. ...+.+||+.+.. .......+ ..... .+++..++ .+++.|+.++ .|..||+.+.
T Consensus 210 ~~~l~s~~~------d~~i~vwd~~~~~--~~~~~~~~--h~~~v-~~~~~sd~-~~l~s~~~d~-----~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDR------DEHIKISHYPQCF--IVDKWLFG--HKHFV-SSICCGKD-YLLLSAGGDD-----KIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEET------TSCEEEEEESCTT--CEEEECCC--CSSCE-EEEEECST-TEEEEEESSS-----EEEEEETTTC
T ss_pred CcEEEEEcC------CCcEEEEECCCCc--eeeeeecC--CCCce-EEEEECCC-CEEEEEeCCC-----eEEEEECCCC
Confidence 667777775 3579999988753 22211111 11111 22222234 5666776553 7888999877
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=81.92 E-value=0.9 Score=53.62 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=43.3
Q ss_pred cCCEEEEecCCCCH--------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-----HHHH
Q 002047 697 KAPIKIFGDLHGQF--------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETI 751 (975)
Q Consensus 697 ~~~i~vvGDiHG~~--------------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl 751 (975)
+..|+.+.|+||.+ ..|..+++.+.-.... .-+|+.||+++..+.+ ..++
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHH
Confidence 35689999999874 4455566554321111 1467799999987532 4456
Q ss_pred HHHHHhhhcCCCCEEEEeccccc
Q 002047 752 TLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
.+|-++.. -++..||||.
T Consensus 100 ~~ln~lg~-----d~~~~GNHEf 117 (546)
T 4h2g_A 100 HFMNALRY-----DAMALGNHEF 117 (546)
T ss_dssp HHHHHHTC-----SEEECCGGGG
T ss_pred HHHHhcCC-----cEEeccCccc
Confidence 66666532 2567899996
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=81.84 E-value=18 Score=39.25 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=35.5
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCc---EEEEEecCCCC-CCCcccEEEEeCC-cEEEEEcCCCCCCCCCcEEEE
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPR---WHRVVVQGPGP-GPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWAL 259 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~---W~~v~~~g~~P-~~R~~h~~~~~~~-~~lyV~GG~~g~~~~ndv~~y 259 (975)
+.+++.|+. ...+.+||+.+.... +..... .... ....-.+++...+ +.+++.|+.++ .+..|
T Consensus 126 ~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGN------NGEIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIW 193 (416)
T ss_dssp TTBEEEECS------SSCEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEE
T ss_pred CCEEEEEcC------CCeEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEE
Confidence 566667664 346889998775200 011110 0111 1111223333332 36777777654 58999
Q ss_pred ECCCC
Q 002047 260 DTAAK 264 (975)
Q Consensus 260 Dl~s~ 264 (975)
|+.+.
T Consensus 194 d~~~~ 198 (416)
T 2pm9_A 194 DLKAK 198 (416)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 99887
|
| >1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A* | Back alignment and structure |
|---|
Probab=81.65 E-value=36 Score=38.82 Aligned_cols=49 Identities=8% Similarity=-0.119 Sum_probs=31.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~ 211 (975)
..|+||..+.+...-.-.| .+. --+|....+++|+|-|. ..|+||..+.
T Consensus 168 ~yw~yd~~~~~~~~~~w~g---i~~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~ 216 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPA---VGN-CTSALRWLGRYYCFQGN--------QFLRFNPVSG 216 (460)
T ss_dssp EEEEEETTTTEEEEECCTT---SCC-CSEEEEETTEEEEEETT--------EEEEECTTTC
T ss_pred cEEEEecccceeecccCCC---CCc-cchheeeCCceEEEECC--------EEEEEcCccC
Confidence 5789999887665432221 223 34555567899999883 6788887553
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=81.00 E-value=47 Score=36.25 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=47.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||+.+.+-...-.. ....-.+++.. ++..++.|+. ...+.+||+.+.. ..... . ....
T Consensus 146 ~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~~--~~~~~-~----~~~~ 208 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQ--CSLTL-S----IEDG 208 (393)
T ss_dssp CEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTE--EEEEE-E----CSSC
T ss_pred eEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCCe--eEEEE-E----cCCC
Confidence 678889888765433211 11112223332 3445556654 3578899998753 22211 1 0111
Q ss_pred ccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.+++... ++.+++.|+.++ .+..||+.+.
T Consensus 209 v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~ 239 (393)
T 1erj_A 209 VTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETG 239 (393)
T ss_dssp EEEEEECSTTCCEEEEEETTS-----CEEEEETTTC
T ss_pred cEEEEEECCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 12222222 446777787765 5788898876
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=80.94 E-value=1.2 Score=52.51 Aligned_cols=69 Identities=20% Similarity=0.217 Sum_probs=43.0
Q ss_pred cCCEEEEecCCCCH-----------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHH
Q 002047 697 KAPIKIFGDLHGQF-----------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLL 754 (975)
Q Consensus 697 ~~~i~vvGDiHG~~-----------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll 754 (975)
..+|+.++|+||.+ ..+..+++.+.-...+ .-+|..||++++.+. ...++.+|
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~l 103 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKN-----PLFLDAGDVFQGTLYFNQYRGLADRYFM 103 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCcHHHHHhCCcHHHHHH
Confidence 35689999999864 3566666654321111 145679999997653 23455555
Q ss_pred HHhhhcCCCCEEEEecccccc
Q 002047 755 LALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 755 ~~lk~~~P~~v~llrGNHE~~ 775 (975)
-.+. --++..||||..
T Consensus 104 n~lg-----~d~~~lGNHEfd 119 (552)
T 2z1a_A 104 HRLR-----YRAMALGNHEFD 119 (552)
T ss_dssp HHTT-----CCEEECCGGGGT
T ss_pred HhcC-----CCcccccccccc
Confidence 5542 236678999973
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=80.82 E-value=10 Score=40.86 Aligned_cols=134 Identities=13% Similarity=0.168 Sum_probs=57.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||+.+..|..+.... .....-.+++.. ++.+++.|+. ...+.+||+.+.. .|....... .....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~-~~~~~~~~~--~~~~~ 102 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFS--DHDKIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDG-TWKQTLVLL--RLNRA 102 (377)
T ss_dssp CBCEEEEETTEEEECCCBC--CCSSCEEEEEECTTTCCEEEEET------TSSEEEC-------CCCCEEECC--CCSSC
T ss_pred EEEEEEccCCceEEEEEEe--cCCceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCC-ceeeeeEec--ccCCc
Confidence 5667888888887776542 111111222222 3466677764 3468899987752 233332111 11111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-.+++...++.+++.|+.++ .+..||+.+.. .|..+..... +............++.+++.|+.++
T Consensus 103 v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN-DWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp EEEEECCTTSSCCEEEESSS-----CEEECCC------CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESSS
T ss_pred eEEEEECCCCCEEEEEecCC-----eEEEEEECCcc-cceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 12222223335666776654 47777877651 1322221111 0111222223334677778777654
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=80.77 E-value=50 Score=34.47 Aligned_cols=193 Identities=9% Similarity=-0.008 Sum_probs=85.5
Q ss_pred cEEEEEC-CCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEE--EEecCCCCCC
Q 002047 151 DVHCYDV-LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR--VVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~-~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~--v~~~g~~P~~ 227 (975)
.+..||+ .+.....+... +....-.+++...+.+++.|+. ...+.+||+.+....-.. ..........
T Consensus 80 ~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASW------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp CEEEECSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEET------TSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred eEEEEEeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcC------CCeEEEEcccccccccccccCCeeeEEeeC
Confidence 6888998 88877666431 0111122233332445555553 356888887651000000 0000112212
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC-CCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSV 305 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~ 305 (975)
..-.++....+ . ++.|+.+ ..+..||+.+ ............. .......... ++.+++.|+.++.
T Consensus 151 ~~v~~~~~~~~-~-l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~----~~i~~i~~~~~~~~~l~~~~~dg~-- 217 (342)
T 1yfq_A 151 NKIFTMDTNSS-R-LIVGMNN-----SQVQWFRLPLCEDDNGTIEESGLK----YQIRDVALLPKEQEGYACSSIDGR-- 217 (342)
T ss_dssp CCEEEEEECSS-E-EEEEEST-----TEEEEEESSCCTTCCCEEEECSCS----SCEEEEEECSGGGCEEEEEETTSE--
T ss_pred CceEEEEecCC-c-EEEEeCC-----CeEEEEECCccccccceeeecCCC----CceeEEEECCCCCCEEEEEecCCc--
Confidence 22223333344 4 5555544 3688999987 3112222211111 1112222333 5677777775432
Q ss_pred CccceEEeecC-----CCCeEEEEECCCCCC---CCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 306 PLASAYGLAKH-----RDGRWEWAIAPGVSP---SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 306 ~l~d~~~~~~~-----~~~~W~w~~~~g~~P---~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
..+|.++.. ......+........ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-.
T Consensus 218 --i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---------~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 218 --VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG---------IISCWNLQTRKKI 286 (342)
T ss_dssp --EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS---------CEEEEETTTTEEE
T ss_pred --EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc---------eEEEEcCccHhHh
Confidence 234545443 122222221111000 00011222333 466777777532 3889999988653
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=80.62 E-value=36 Score=40.68 Aligned_cols=110 Identities=7% Similarity=-0.029 Sum_probs=49.4
Q ss_pred cEEEEECCC-CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCC
Q 002047 255 DVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP 333 (975)
Q Consensus 255 dv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~ 333 (975)
.++.+|+.+ . +-..+.... .........+. .+++.++++..+... ...+++.++..+. .............-
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~~--~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLGK--EQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCCS--CSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCCC--CcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 789999988 7 333332210 01112223334 566555554432221 2355666655433 32222111000000
Q ss_pred cceeeEEE-eCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 334 RYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 334 R~~hs~v~-~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
....+.++ -++++++.+..++ ...+|.+|+... +..+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 00112222 2566666665432 356999998766 55443
|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
Probab=80.47 E-value=76 Score=35.18 Aligned_cols=63 Identities=17% Similarity=0.125 Sum_probs=34.9
Q ss_pred cccEEEEeCCcEEEEEcCCCCCC----CCCcEEEEE-C---CCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKR----PLADVWALD-T---AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~----~~ndv~~yD-l---~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
..|++++..++.+|.+|-..... ...+...-. + ... ....+.. ...|+++...++.+|.+|-.
T Consensus 130 ~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~hs~alt~~G~v~~wG~n 200 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI--RIKMVAA-------GAEHTAAVTEDGDLYGWGWG 200 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTC--CEEEEEE-------CSSEEEEEETTSCEEEEECC
T ss_pred hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCC--cEEEEec-------CCCeEEEEeCCCCEEEeeCC
Confidence 46888887777999999653211 111111100 0 001 2222221 24677788889999999853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 975 | ||||
| d1jk7a_ | 294 | d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human | 1e-105 | |
| d3c5wc1 | 288 | d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt | 2e-98 | |
| d1auia_ | 473 | d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc | 7e-95 | |
| d1s95a_ | 324 | d.159.1.3 (A:) Serine/threonine protein phosphatas | 3e-89 | |
| d1g5ba_ | 219 | d.159.1.3 (A:) lambda ser/thr protein phosphatase | 5e-14 | |
| d1nnwa_ | 251 | d.159.1.5 (A:) Hypothetical protein PF1291 {Archae | 5e-13 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 6e-11 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 2e-05 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 1e-04 | |
| d1su1a_ | 184 | d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia | 4e-08 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 3e-04 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Score = 326 bits (838), Expect = e-105
Identities = 140/313 (44%), Positives = 194/313 (61%), Gaps = 20/313 (6%)
Query: 641 QMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPI 700
+++I+S+ I LL+ RG KP + L NEI LC + IF S+P +L+L+AP+
Sbjct: 1 KLNIDSI----IQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPL 54
Query: 701 KIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE 760
KI GD+HGQ+ DL+RLF+ G P +YLFLGDYVDRG+ SLETI LLLA K++
Sbjct: 55 KICGDIHGQYYDLLRLFEYGGFPPE------SNYLFLGDYVDRGKQSLETICLLLAYKIK 108
Query: 761 YPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKI 820
YP N L+RGNHE A IN ++GF EC R + W FN LP+AA++++KI
Sbjct: 109 YPENFFLLRGNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKI 164
Query: 821 ICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880
C HGG+ + +EQI + RP + + L DLLWSDP ++ V G N RG
Sbjct: 165 FCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVS-F 220
Query: 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL 940
TFG + V +F + +DL LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ +
Sbjct: 221 TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSV 280
Query: 941 GRDLVVVPKLIHP 953
L+ +++ P
Sbjct: 281 DETLMCSFQILKP 293
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 308 bits (791), Expect = 2e-98
Identities = 109/285 (38%), Positives = 161/285 (56%), Gaps = 14/285 (4%)
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIA 730
L +++ LC+ A+ I + E +V +++ P+ + GD+HGQF DLM LF G
Sbjct: 18 LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT---- 73
Query: 731 YIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIER 790
+YLF+GDYVDRG +S+ET+TLL+ALKV Y + ++RGNHE+ I ++GF EC+ +
Sbjct: 74 --NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRK 131
Query: 791 MGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850
G + W LF++LPL AL++ +I C+HGG+ SI+ ++ I L R +
Sbjct: 132 YGNAN---VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPH-E 187
Query: 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGF 910
+ DLLWSDP + G + RG G TFG D F + N L L+ RAH+ VM+G+
Sbjct: 188 GPMCDLLWSDPDDRG---GWGISPRGAG-YTFGQDISETFNHANGLTLVSRAHQLVMEGY 243
Query: 911 ERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955
+++T+FSA NYC N AI+ L L P P
Sbjct: 244 NWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Score = 306 bits (785), Expect = 7e-95
Identities = 103/318 (32%), Positives = 153/318 (48%), Gaps = 31/318 (9%)
Query: 661 WKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEY 720
K + ++ L+ + + I E ++L + AP+ + GD+HGQF DLM+LF+
Sbjct: 33 LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVG 92
Query: 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINAL 780
GSP+ YLFLGDYVDRG S+E + L ALK+ YP + L+RGNHE +
Sbjct: 93 GSPANT------RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEY 146
Query: 781 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENL 840
F F+ EC + ER + F+ LPLAAL+ ++ +C+HGG+ IN ++ I L
Sbjct: 147 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKL 202
Query: 841 QRPITMEAGSIVLMDLLWSDPTENDSVEGLR-----PNARGPGLVTFGPDRVMEFCNNND 895
R A + D+LWSDP E+ E + RG + V EF +N+
Sbjct: 203 DRFKEPPAYGP-MCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFYSYPAVCEFLQHNN 260
Query: 896 LQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDL----- 944
L I+RAHE G+ + + LIT+FSA NY NN A+L ++
Sbjct: 261 LLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQ 320
Query: 945 ---VVVPKLIHPLPPAIS 959
P + +
Sbjct: 321 FNCSPHPYWLPNFMDVFT 338
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 285 bits (731), Expect = 3e-89
Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 20/291 (6%)
Query: 671 LDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYGSPSTA 726
L + + + S ++++ I + GD HGQF DL+ +F+ G PS
Sbjct: 29 LHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSET 88
Query: 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIE 786
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E
Sbjct: 89 NP-----YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGE 143
Query: 787 CIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGG-IGRSINHVEQIENLQRPIT 845
+ + + +F WLPLA I K++ MHGG ++ I ++R
Sbjct: 144 VKAKYTA----QMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQ 199
Query: 846 MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905
S + DLLWSDP + G + RG FGPD F N+L I+R+HE
Sbjct: 200 PPD-SGPMCDLLWSDPQPQN---GRSISKRGVS-CQFGPDVTKAFLEENNLDYIIRSHEV 254
Query: 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLP 955
+G+E G +T+FSA NYC N + + L G DL +P
Sbjct: 255 KAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVP 305
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Score = 70.3 bits (171), Expect = 5e-14
Identities = 41/213 (19%), Positives = 71/213 (33%), Gaps = 39/213 (18%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKV 759
I + GDLHG + +LM D G + + +GD VDRG ++E + L
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLEL------ 63
Query: 760 EYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH----------RINRLFNW 809
+RGNHE I+ L + G W ++ + +
Sbjct: 64 ITFPWFRAVRGNHEQMMIDGLSERG--NVNHWLLNGGGWFFNLDYDKEILAKALAHKADE 121
Query: 810 LPLA---ALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS 866
LPL +KK + H + + Q+ +W+ ++S
Sbjct: 122 LPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQV-------------IWNRERISNS 168
Query: 867 VEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLI 899
G+ +G FG ++ + I
Sbjct: 169 QNGIVKEIKGADTFIFGHTPAVKPLKFANQMYI 201
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 67.8 bits (164), Expect = 5e-13
Identities = 18/139 (12%), Positives = 35/139 (25%), Gaps = 7/139 (5%)
Query: 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK 758
+ + ++ G L Y LG+ V + E I ++ L
Sbjct: 2 YVAVLANIAGNLPALTAALSRIEE-MREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT 60
Query: 759 VEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG----IWAWHRINRLFNWLPLAA 814
NV +IRG ++ + E G +
Sbjct: 61 --KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLR 118
Query: 815 LIEKKIICMHGGIGRSINH 833
+ ++ GG +
Sbjct: 119 DLPIYLVDKIGGNEVFGVY 137
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (149), Expect = 6e-11
Identities = 44/293 (15%), Positives = 60/293 (20%), Gaps = 66/293 (22%)
Query: 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVL 206
+ + + Y+ W R+ PR+ VG ++ GG + D L
Sbjct: 16 QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSAL 72
Query: 207 DLTQQRPRWHRVV--------------------------------------------VQG 222
D
Sbjct: 73 DCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV 132
Query: 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282
R V V R L A+GG DG L +
Sbjct: 133 APMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT------AMNTIR 186
Query: 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342
+ GG D + D E R
Sbjct: 187 SGAGVCVLHNCIYAAGGYDGQDQ-----LNSVERYDVETETWTFVAPMKHRRSALGITVH 241
Query: 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAA 395
R++V LGG SV D W S VT +GR A
Sbjct: 242 QGRIYV----LGGYDGHTFLDSVECYDPDTDTW----SEVTRMTSGRSGVGVA 286
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (104), Expect = 2e-05
Identities = 40/275 (14%), Positives = 63/275 (22%), Gaps = 37/275 (13%)
Query: 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242
VG ++ GG LS L + + W R+ PR G +VG L
Sbjct: 3 VGRLIYTAGGYFRQSLS--YLEAYNPSNGT--WLRL---ADLQVPRSGLAGCVVGGL-LY 54
Query: 243 AIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302
A+GG + + P + P +
Sbjct: 55 AVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC- 113
Query: 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGG--RMVE 360
+ + + + + R +N L+ GG G E
Sbjct: 114 ------IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAE 167
Query: 361 DSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVEL----------------- 403
+S A G D +L
Sbjct: 168 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 227
Query: 404 ---TRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLV 435
RR I++ GG G LD +
Sbjct: 228 PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVEC 262
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 12/132 (9%)
Query: 142 GIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAE 201
G CY N+W IT + + V+ I AG
Sbjct: 156 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAG---------VCVLHNCIYAAGGYDG 206
Query: 202 DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261
+ + + P R + + R + +GG DG L V D
Sbjct: 207 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGR-IYVLGGYDGHTFLDSVECYDP 265
Query: 262 AAKPYEWRKLEP 273
W ++
Sbjct: 266 DTD--TWSEVTR 275
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Score = 52.3 bits (124), Expect = 4e-08
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 16/156 (10%)
Query: 700 IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITL----LL 755
+ D+HG R+ + + + LGD ++ G + ++
Sbjct: 4 LMFASDIHGSLPATERVLELFAQSG------AQWLVILGDVLNHGPRNALPEGYAPAKVV 57
Query: 756 ALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAAL 815
E + V +RGN ++ L F I + + + LF L AL
Sbjct: 58 ERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPAL 117
Query: 816 IEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSI 851
+ ++ H+ E GS+
Sbjct: 118 NQNDVLVYGHT------HLPVAEQRGEIFHFNPGSV 147
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 42.1 bits (97), Expect = 3e-04
Identities = 43/318 (13%), Positives = 73/318 (22%), Gaps = 33/318 (10%)
Query: 115 RLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTP 174
R++++ N A G+P G +D T S T
Sbjct: 32 RVLMWSS----YRNDAFGGSP-----------GGITLTSSWDPSTGIVSDRTVTVTKHDM 76
Query: 175 RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMA 234
++ +V+ GG S D Q
Sbjct: 77 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTI 136
Query: 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294
+ + P + W AK + +G +A G +
Sbjct: 137 GGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY-RSDNHAWLFGWKKGSV 195
Query: 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALG 354
G A + S G + + G S R V A+
Sbjct: 196 FQAGPSTAMNWYYTS---------GSGDV-KSAGKRQSNRGVAPDAMCGN--AVMYDAVK 243
Query: 355 GGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414
G + T + + + S + + R +
Sbjct: 244 GKILT-----FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP 298
Query: 415 GDLIFIYGGLRGGVLLDD 432
FI GG R G+ +D
Sbjct: 299 DGSTFITGGQRRGIPFED 316
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 975 | |||
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 100.0 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 100.0 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 100.0 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.95 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.82 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 99.78 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.53 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.08 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.65 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.65 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.34 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.32 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.3 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 98.23 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 97.14 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 96.88 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 96.68 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 95.87 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 95.02 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 94.08 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.86 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.77 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 91.9 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 91.81 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 90.25 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 88.63 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 87.45 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 86.23 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 86.04 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 85.02 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 84.61 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 82.44 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 82.38 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 82.35 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 80.08 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=100.00 E-value=4.1e-74 Score=620.97 Aligned_cols=291 Identities=47% Similarity=0.847 Sum_probs=275.1
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
+|++|++|+..+.+++. +...|+++||.+||++|+++|++||+++++.+|++||||||||+.||+++|+..|+|+..
T Consensus 4 id~~i~~l~~~~~~~~~--~~~~l~~~~i~~l~~~a~~i~~~e~~ll~i~~pv~VvGDiHG~~~DL~~if~~~g~p~~~- 80 (294)
T d1jk7a_ 4 IDSIIQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 80 (294)
T ss_dssp HHHHHHHHHTTTTSCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTSS-
T ss_pred HHHHHHHHHhccCCCCC--cccCCCHHHHHHHHHHHHHHHHhCCCEEEecCCeEEEEECCCChHhHHHHHhhcCCCccc-
Confidence 68899999987655543 244689999999999999999999999999999999999999999999999999999876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+||+.+|++||++||++|++||||||...++..|||++||.++|+. .+|+.++++|
T Consensus 81 -----~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~y~~----~i~~~~~~~F 151 (294)
T d1jk7a_ 81 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 151 (294)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHTTSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccccccccccchhHHHhhcCH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999964 5999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+||+|++++|||||||+|.+.++++|+.++||.+.+..+ ++.|+|||||.. ...+|.+|.||.| +.||++++
T Consensus 152 ~~LPlaalI~~~i~cvHGGi~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~--~~~~~~~~~RG~g-~~fg~~~~ 227 (294)
T d1jk7a_ 152 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVLGWGENDRGVS-FTFGAEVV 227 (294)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCHHHHHTCCSSCCCCSSS-HHHHHHHCEECS--SCSSEEECTTSSS-EEECHHHH
T ss_pred hhCceeeEEcCeEEEecCcccCCccchhhhhhccCCCCCCCcc-hhhhhhhcCCcc--ccCCCCCCCCCCc-cccCHHHH
Confidence 9999999999999999999999999999999999998876554 899999999986 4578999999999 79999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 954 (975)
++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.|++++.+++++|+|.
T Consensus 228 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~viTiFSa~nY~~~~~N~gail~i~~~~~~~~~~~~p~ 294 (294)
T d1jk7a_ 228 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (294)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTGGGTCCCCEEEEEECTTSCEEEEEECCC
T ss_pred HHHHHHCCCCEEEEcCccccCCcEEecCCcEEEEecCCCcCCCCCccEEEEEECCCCcEeEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999984
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-72 Score=603.58 Aligned_cols=284 Identities=39% Similarity=0.738 Sum_probs=270.9
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+.+.+.+ .|++++|.+||++|+++|++||+++++++|++||||||||+.||.++|+..+.++..
T Consensus 5 ~d~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~e~~l~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~- 73 (288)
T d3c5wc1 5 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 73 (288)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEEeCCCeEEEeeCCCCHHHHHHHHHhcCCCccc-
Confidence 688999997763 488999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||..||.++||.. .+|..++++|
T Consensus 74 -----~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~~~~~~gF~~E~~~ky~~~---~i~~~~~~~F 145 (288)
T d3c5wc1 74 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 145 (288)
T ss_dssp -----CEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHHSSS---HHHHHHHHHH
T ss_pred -----eEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCcccccccccCcchhhhhhcCcH---HHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999863 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+||+|++++|||||||++.+.++++|+.+.||...+... ++.|+|||||.. ..+|.+|.||.| +.||++++
T Consensus 146 ~~LPlaaiI~~~i~cvHGGi~~~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~---~~~~~~~~rg~g-~~fg~~~~ 220 (288)
T d3c5wc1 146 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDIS 220 (288)
T ss_dssp TTSCSEEEETTTEEEESSCCCTTCSSHHHHHHSCCSSSCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHHH
T ss_pred hhccceEEecCeEEEecccccCCccchhhHhhcccccCCCccc-cccccccCCccc---CCCCccCCCCCe-eecCHHHH
Confidence 9999999999999999999999999999999999999877654 899999999975 468999999999 68999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLP 955 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 955 (975)
++||++||+++||||||++++||++.+++||||||||||||+..+|.||+|+|++++++++..++|.|
T Consensus 221 ~~Fl~~n~l~~IIR~He~~~~G~~~~~~~kviTiFSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~p~p 288 (288)
T d3c5wc1 221 ETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 288 (288)
T ss_dssp HHHHHHTTCSEEEECCSCCTTSEEEEGGGTEEEEBCCTTGGGTSCCCEEEEEECTTCCEEEEEECCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCCCCeecCCCcEEEEecCCCccCCCCcceEEEEECCCCcEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999976
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-70 Score=595.93 Aligned_cols=296 Identities=32% Similarity=0.578 Sum_probs=273.2
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeec----CCEEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLK----APIKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~----~~i~vvGDiHG~~~~L~~ll~~~g 721 (975)
++++.+|+.+...+ .|+.+++.+||++|+++|++||+++++. .||+|||||||||.||+++|+..|
T Consensus 14 ~~~~~li~~~~~~~----------~l~~~~~~~ll~~~~~il~~e~~l~~i~~~~~~pv~VvGDiHGq~~DL~~if~~~g 83 (324)
T d1s95a_ 14 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 83 (324)
T ss_dssp HHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeecCCCCCEEEEEECCCCHHHHHHHHHHCC
Confidence 56788888886643 4789999999999999999999999984 699999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
+|+... +|||||||||||++|+||+.+|++||++||++|++||||||...++..|||++||..+|+. .+|.
T Consensus 84 ~p~~~~-----~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~~~n~~ygF~~e~~~k~~~----~l~~ 154 (324)
T d1s95a_ 84 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 154 (324)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCH----HHHH
T ss_pred CCCCCC-----eEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCccccccccccccchHhhhhcCH----HHHH
Confidence 998652 6999999999999999999999999999999999999999999999999999999999965 5999
Q ss_pred hhhccccccceEEEEcceEEEecCCcc-CcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCcee
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGIG-RSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi~-~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~ 880 (975)
.++++|++||+||+|++++|||||||+ +.+.++++|++++||.+.+... ++.|+|||||... .+|.++.||.| +
T Consensus 155 ~~~~~F~~LPlaa~I~~~ilcvHGGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dlLWSDP~~~---~~~~~~~Rg~g-~ 229 (324)
T d1s95a_ 155 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQ---NGRSISKRGVS-C 229 (324)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSSCCSSS-HHHHHHHCEECSS---SSEEECTTSSS-E
T ss_pred HHHHHHhhcchhhhccCcEEEecCCcCccccCCHHHHHhccCCCCCcchh-hhhhhhccCcccc---CCcCcCCCCCc-C
Confidence 999999999999999999999999996 5688999999999999877654 8999999999863 57889999999 6
Q ss_pred eeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEc-CCceEEeEEecCCCCCCC
Q 002047 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAIS 959 (975)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~~ 959 (975)
.||++++++||++||+++||||||++++||+++++++|||||||||||+..+|.||+|.|+ +++.+.++.+.|.|....
T Consensus 230 ~FG~~~~~~Fl~~n~l~lIIR~He~v~~G~~~~~~~kviTvFSa~nY~~~~~N~~a~l~i~~~~~~~~~~~f~~~p~p~~ 309 (324)
T d1s95a_ 230 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNV 309 (324)
T ss_dssp EECHHHHHHHHHHHTCCEEEECCSCCTTSEEEEGGGTEEEECCCSSGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCSC
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCccccCceEEecCCcEEEEeCCCccCCCCCcceEEEEEECCCceeEEEEecCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999996 568999999999988877
Q ss_pred CCCCCC
Q 002047 960 SPETSP 965 (975)
Q Consensus 960 ~~~~~~ 965 (975)
.|....
T Consensus 310 ~p~~~~ 315 (324)
T d1s95a_ 310 KPMAYA 315 (324)
T ss_dssp CTTTTS
T ss_pred Chhhhh
Confidence 776553
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-68 Score=599.42 Aligned_cols=292 Identities=37% Similarity=0.621 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++.+.+++++.. .|+++++++||++|.++|++||+|++|.+|++|||||||||.||++||+..|.|+..
T Consensus 30 ~~~l~~hf~~eg----------rl~~~~~l~li~~a~~il~~Epnll~i~~Pv~VvGDIHGq~~DLl~If~~~G~P~~~- 98 (473)
T d1auia_ 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (473)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCCCCHHHHHHHHHHcCCCCcc-
Confidence 455677777642 589999999999999999999999999999999999999999999999999998876
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+|||.+|++||+.||++|++||||||++.++..|||..||..+|++ .+|+.++++|
T Consensus 99 -----~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~~~n~~ygF~~E~~~ky~~----~iy~~~~~~F 169 (473)
T d1auia_ 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 169 (473)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccHhhhcccccHHHHHHhhcH----HHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999999975 5999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCcc-cCCCCCceeee
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLR-PNARGPGLVTF 882 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~-~n~rg~~~~~f 882 (975)
++||+||+|+++||||||||+|.+.++++|+.|.||.+.+..+ +++|||||||.+... ..++. ++.||.| +.|
T Consensus 170 ~~LPLAAiI~~kifcVHGGIsp~l~~l~dI~~I~R~~e~p~~~-~~~DLLWSDP~~~~~~~~~~~~~~~ns~RG~g-~~F 247 (473)
T d1auia_ 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (473)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred ccchhhhhhcCcEEEeeccCCCccCchhhhhhcccccCCCCcC-ceeeeeccCCcccccccccccccccCCCCCCE-EEE
Confidence 9999999999999999999999999999999999999887655 899999999986422 12333 3579999 689
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCCe------EEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCC
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~------~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 956 (975)
|.+++++||++||+++||||||++++||+++++++ |||||||||||+..+|+||||+++++ .+.++.+.+.+-
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~Gy~~~~~~~~~~~~~viTVFSApnYc~~~nN~aavl~~~~~-~~~i~qf~~~~h 326 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 326 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchhhhhhhhcCCccCCCCCEEEEcCCCCcCCCcCCeeEEEeecCC-CcceEEecCCCC
Confidence 99999999999999999999999999999999987 99999999999999999999999876 588899988776
Q ss_pred CCCCCC
Q 002047 957 AISSPE 962 (975)
Q Consensus 957 ~~~~~~ 962 (975)
.+.-|.
T Consensus 327 p~~~p~ 332 (473)
T d1auia_ 327 PYWLPN 332 (473)
T ss_dssp CCCCGG
T ss_pred cccccc
Confidence 665443
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-33 Score=303.67 Aligned_cols=261 Identities=20% Similarity=0.338 Sum_probs=224.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
|+.||||||.... .++++++||+.+++|++++++ |.+|++|++++++++|||+||
T Consensus 4 g~~iyv~GG~~~~----------------------~~~~~~~yd~~t~~W~~~~~~---p~~R~~~~~~~~~~~iyv~GG 58 (288)
T d1zgka1 4 GRLIYTAGGYFRQ----------------------SLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGG 58 (288)
T ss_dssp CCCEEEECCBSSS----------------------BCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEECCcCCC----------------------CCceEEEEECCCCeEEECCCC---CCccceeEEEEECCEEEEEeC
Confidence 6789999997531 678999999999999999776 899999999999999999999
Q ss_pred cCC---CCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEE
Q 002047 193 IGP---AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269 (975)
Q Consensus 193 ~~~---~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~ 269 (975)
... .....+++|+||+.+++ |+.++ ++|.+|++|+++++++ +||++||.++...++++++||+.++ +|.
T Consensus 59 ~~~~~~~~~~~~~~~~yd~~~~~--w~~~~---~~p~~r~~~~~~~~~~-~i~~~gg~~~~~~~~~~~~~~~~~~--~~~ 130 (288)
T d1zgka1 59 RNNSPDGNTDSSALDCYNPMTNQ--WSPCA---PMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERD--EWH 130 (288)
T ss_dssp EEEETTEEEECCCEEEEETTTTE--EEECC---CCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTT--EEE
T ss_pred cccCCCCccccchhhhccccccc--ccccc---cccceecceeccccce-eeEEecceecccccceeeeeccccC--ccc
Confidence 742 23457899999999975 99987 8999999999999998 8999999998888999999999999 999
Q ss_pred EccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEE
Q 002047 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349 (975)
Q Consensus 270 ~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~ 349 (975)
....... +|. .++++..++++|++||.+... .+.+++.|++..+ +|...... +..+..|+++.++++|+++
T Consensus 131 ~~~~~~~---~r~-~~~~~~~~~~~~~~GG~~~~~-~~~~~~~~d~~~~---~~~~~~~~-~~~~~~~~~~~~~~~i~i~ 201 (288)
T d1zgka1 131 LVAPMLT---RRI-GVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERN---EWRMITAM-NTIRSGAGVCVLHNCIYAA 201 (288)
T ss_dssp ECCCCSS---CCB-SCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEE
T ss_pred ccccccc---ccc-cceeeeeeecceEecCccccc-ccceEEEeecccc---cccccccc-ccccccccccceeeeEEEe
Confidence 8766543 344 445556699999999987654 6788999988766 66666654 6788999999999999999
Q ss_pred cCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCC
Q 002047 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVL 429 (975)
Q Consensus 350 GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~ 429 (975)
||.+... ..++++.||+.+++|..+..+ |.+|..|++++++++||||||.++...
T Consensus 202 GG~~~~~----~~~~~~~~~~~~~~~~~~~~~---------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~ 256 (288)
T d1zgka1 202 GGYDGQD----QLNSVERYDVETETWTFVAPM---------------------KHRRSALGITVHQGRIYVLGGYDGHTF 256 (288)
T ss_dssp CCBCSSS----BCCCEEEEETTTTEEEECCCC---------------------SSCCBSCEEEEETTEEEEECCBCSSCB
T ss_pred cCccccc----cccceeeeeecceeeecccCc---------------------cCcccceEEEEECCEEEEEecCCCCee
Confidence 9987654 378899999999999998766 568999999999999999999999999
Q ss_pred ccceEeeeccc
Q 002047 430 LDDLLVAEDLA 440 (975)
Q Consensus 430 l~Dv~~ld~~~ 440 (975)
++++|++|...
T Consensus 257 ~~~v~~yd~~~ 267 (288)
T d1zgka1 257 LDSVECYDPDT 267 (288)
T ss_dssp CCEEEEEETTT
T ss_pred cceEEEEECCC
Confidence 99999999765
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-32 Score=293.27 Aligned_cols=259 Identities=21% Similarity=0.333 Sum_probs=219.8
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|....+.|.||++|+++++ +++||||||....... ...++++++||+.+
T Consensus 29 ~~W~~~~~~p~~R~~~~~~~~------------~~~iyv~GG~~~~~~~-----------------~~~~~~~~~yd~~~ 79 (288)
T d1zgka1 29 GTWLRLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDG-----------------NTDSSALDCYNPMT 79 (288)
T ss_dssp TEEEECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTE-----------------EEECCCEEEEETTT
T ss_pred CeEEECCCCCCccceeEEEEE------------CCEEEEEeCcccCCCC-----------------ccccchhhhccccc
Confidence 456677889999999999999 7899999997532210 11678999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
++|+.++++ |.+|+.|+++++++++|++||... ....++.++||+.+.. |.... .++.+|++|+++.+.+
T Consensus 80 ~~w~~~~~~---p~~r~~~~~~~~~~~i~~~gg~~~-~~~~~~~~~~~~~~~~--~~~~~---~~~~~r~~~~~~~~~~- 149 (288)
T d1zgka1 80 NQWSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEPERDE--WHLVA---PMLTRRIGVGVAVLNR- 149 (288)
T ss_dssp TEEEECCCC---SSCCBTCEEEEETTEEEEECCEET-TEECCCEEEEETTTTE--EEECC---CCSSCCBSCEEEEETT-
T ss_pred ccccccccc---cceecceeccccceeeEEecceec-ccccceeeeeccccCc--ccccc---ccccccccceeeeeee-
Confidence 999999876 899999999999999999999853 4457889999999874 98876 8899999999999988
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~ 319 (975)
.+|++||.+.....+++++||+.++ +|......... +.+++++..+++||++||.+... .+++.+.|+...+
T Consensus 150 ~~~~~GG~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~----~~~~~~~~~~~~i~i~GG~~~~~-~~~~~~~~~~~~~- 221 (288)
T d1zgka1 150 LLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTI----RSGAGVCVLHNCIYAAGGYDGQD-QLNSVERYDVETE- 221 (288)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSC----CBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTT-
T ss_pred cceEecCcccccccceEEEeecccc--ccccccccccc----cccccccceeeeEEEecCccccc-cccceeeeeecce-
Confidence 8999999988888999999999999 99988765442 45566667799999999987765 6788999988876
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
+|...... |.+|..|++++++++|||+||.+... .++++|+||+++++|+.+..+
T Consensus 222 --~~~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 276 (288)
T d1zgka1 222 --TWTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM------------------ 276 (288)
T ss_dssp --EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC------------------
T ss_pred --eeecccCc-cCcccceEEEEECCEEEEEecCCCCe----ecceEEEEECCCCEEEECCCC------------------
Confidence 67777654 78999999999999999999987654 378899999999999999988
Q ss_pred ccCCCccceeEEEE
Q 002047 400 AVELTRRCRHAAAA 413 (975)
Q Consensus 400 ~~~p~~R~~hsa~~ 413 (975)
|.+|.+|++++
T Consensus 277 ---p~~R~~~~~~~ 287 (288)
T d1zgka1 277 ---TSGRSGVGVAV 287 (288)
T ss_dssp ---SSCCBSCEEEE
T ss_pred ---CCCcEeEEEEE
Confidence 66999999876
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.95 E-value=5.4e-27 Score=264.03 Aligned_cols=275 Identities=16% Similarity=0.118 Sum_probs=196.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEe
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQG 191 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~G 191 (975)
+++||||||......... .+....+++||+.+++|+.+..+. .|..+.+++++++ +++||++|
T Consensus 30 ~gkv~v~GG~~~~~~~~~---------------~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~~g~i~v~G 93 (387)
T d1k3ia3 30 SGRVLMWSSYRNDAFGGS---------------PGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDGNGQIVVTG 93 (387)
T ss_dssp TTEEEEEEECCCTTTCSC---------------CCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECTTSCEEEEC
T ss_pred CCEEEEEEeecCcccCCC---------------CCceeEEEEEECCCCcEeecCCCC-CCcccceeEEEEecCCcEEEee
Confidence 789999999865431100 014456889999999999876652 2344455565555 45999999
Q ss_pred ccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCC-CCCCCcEEEEECCCCCcEEEE
Q 002047 192 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRK 270 (975)
Q Consensus 192 G~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g-~~~~ndv~~yDl~s~~~~W~~ 270 (975)
|.+ .+++++||+.+++ |+.++ .+|.+|+.|+++++.++++|++||... ...++++++||+.++ +|+.
T Consensus 94 g~~-----~~~~~~yd~~~~~--w~~~~---~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~ 161 (387)
T d1k3ia3 94 GND-----AKKTSLYDSSSDS--WIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK--TWTS 161 (387)
T ss_dssp SSS-----TTCEEEEEGGGTE--EEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT--EEEE
T ss_pred cCC-----CcceeEecCccCc--ccccc---cccccccccceeeecCCceeeeccccccccccceeeeecCCCC--ceee
Confidence 864 3679999999975 99876 999999999999998779999999754 556899999999999 9998
Q ss_pred ccCCCCCCC-----------------------------------------------------------CcceeEEEE--E
Q 002047 271 LEPEGEGPP-----------------------------------------------------------PCMYATASA--R 289 (975)
Q Consensus 271 v~~~~~~P~-----------------------------------------------------------~r~~~~a~~--~ 289 (975)
+......+. ..+.++++. .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (387)
T d1k3ia3 162 LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA 241 (387)
T ss_dssp ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET
T ss_pred cCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeec
Confidence 764432110 011112222 2
Q ss_pred eCCeEEEecCCCCCCCC----ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCC--ccccC
Q 002047 290 SDGLLLLCGGRDASSVP----LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR--MVEDS 362 (975)
Q Consensus 290 ~~g~lyvfGG~~~~~~~----l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~--~~~~~ 362 (975)
.++++|+|||....... ......+.......|.|.....+ |.+|..|+++++ +++|||+||...... .....
T Consensus 242 ~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 242 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred cCCceEEEEeccCCCCCcccceeecccccccccCCCceeecccc-ccccccceeeeccCCeEEEECCcccCccCCCCcEe
Confidence 46899999997543321 12223333444456678777665 788999998888 679999999864322 11335
Q ss_pred CcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEE--CCEEEEEcCC-CC--CCCccceEeee
Q 002047 363 SSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGL-RG--GVLLDDLLVAE 437 (975)
Q Consensus 363 ~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~-~~--~~~l~Dv~~ld 437 (975)
..+++||+++++|+.+..+ +.+|++|+++++ +++|||+||. .+ .....++++||
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~---------------------~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~ 379 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFT 379 (387)
T ss_dssp CCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEE
T ss_pred ceEEEEECCCCeEEECCCC---------------------CCcccceEEEEECCCCEEEEEeCCCcCCCCcccceEEEEc
Confidence 6799999999999999887 668999998887 8899999994 22 24567788877
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.82 E-value=4.9e-19 Score=198.28 Aligned_cols=234 Identities=14% Similarity=0.218 Sum_probs=162.4
Q ss_pred CCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecC
Q 002047 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (975)
Q Consensus 88 ~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~ 167 (975)
.|..++.|+.+++. +++||++||.. .+++++||+.+++|+.+..
T Consensus 72 ~~~~~~~~~~~~~~-----------~g~i~v~Gg~~-------------------------~~~~~~yd~~~~~w~~~~~ 115 (387)
T d1k3ia3 72 TKHDMFCPGISMDG-----------NGQIVVTGGND-------------------------AKKTSLYDSSSDSWIPGPD 115 (387)
T ss_dssp CSCCCSSCEEEECT-----------TSCEEEECSSS-------------------------TTCEEEEEGGGTEEEECCC
T ss_pred CCcccceeEEEEec-----------CCcEEEeecCC-------------------------CcceeEecCccCccccccc
Confidence 34444555665553 67899999863 2467899999999999877
Q ss_pred CCCCCCCccceEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC-----------------------
Q 002047 168 FGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP----------------------- 223 (975)
Q Consensus 168 ~g~~P~pR~~hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~----------------------- 223 (975)
+ |.+|..|+++++. ++||++||....+...+++++||+.+++ |+.++....
T Consensus 116 ~---~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (387)
T d1k3ia3 116 M---QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW 190 (387)
T ss_dssp C---SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC
T ss_pred c---cccccccceeeecCCceeeeccccccccccceeeeecCCCCc--eeecCCCcccccccccccceeeccceeEEEEe
Confidence 6 8999999999985 5999999987777778999999999875 987652110
Q ss_pred -------------------------------------CCCCCcccEEEEe-CCcEEEEEcCCCCCCC---CCcEEEEECC
Q 002047 224 -------------------------------------GPGPRYGHVMALV-GQRYLMAIGGNDGKRP---LADVWALDTA 262 (975)
Q Consensus 224 -------------------------------------~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~---~ndv~~yDl~ 262 (975)
.+..++++++... .++++|++||...... ......++..
T Consensus 191 ~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~ 270 (387)
T d1k3ia3 191 KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLG 270 (387)
T ss_dssp GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECC
T ss_pred CCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeeccccc
Confidence 1112222222221 2348999999754221 2233333322
Q ss_pred ---CCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC-----CCCccceEEeecCCCCeEEEEECCCCCCCCc
Q 002047 263 ---AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS-----SVPLASAYGLAKHRDGRWEWAIAPGVSPSPR 334 (975)
Q Consensus 263 ---s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~-----~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R 334 (975)
.....|..+..+ |.+|..|++++..+++|||+||.... ...+..++.|++..+ +|..++.+ |.+|
T Consensus 271 ~~~~~~~~~~~~~~~---p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~---~W~~~~~~-~~~R 343 (387)
T d1k3ia3 271 EPGTSPNTVFASNGL---YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPN-SIVR 343 (387)
T ss_dssp STTSCCEEEECTTCC---SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCC-SSCC
T ss_pred ccccCCCceeecccc---ccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCC---eEEECCCC-CCcc
Confidence 222267666655 55688888888889999999997532 234567888988877 77777655 7899
Q ss_pred ceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEEC
Q 002047 335 YQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (975)
Q Consensus 335 ~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~ 370 (975)
..|+++++ +++|||+||...... .....++++|||
T Consensus 344 ~~Hs~a~l~~dG~v~v~GG~~~~~~-~~~~~~~e~y~P 380 (387)
T d1k3ia3 344 VYHSISLLLPDGRVFNGGGGLCGDC-TTNHFDAQIFTP 380 (387)
T ss_dssp CTTEEEEECTTSCEEEEECCCCTTC-SCCCCEEEEEEC
T ss_pred cceEEEEECCCCEEEEEeCCCcCCC-CcccceEEEEcc
Confidence 99998877 889999999643322 123677999997
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=99.78 E-value=5.5e-21 Score=198.94 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=92.2
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
.+|+||||||||+++|+++|+++++++..+ ++||||||||||++|.|||.+|.. .++++|+||||.+++
T Consensus 13 ~rI~vIgDIHG~~~~L~~lL~~i~~~~~~d-----~lv~lGD~vDrGp~s~~vl~~l~~------~~~~~i~GNHE~~ll 81 (219)
T d1g5ba_ 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (219)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred CeEEEEEecccCHHHHHHHHHHcCCCCCCC-----EEEEeCCccccCccHHHHHHHhhc------cccccccCcHHHHHH
Confidence 479999999999999999999999865543 899999999999999999988744 589999999999998
Q ss_pred hhhcCChHH-HHHHhCCc-------ccchhhhhhhccccccceEEEE---cceEEEecCCccCc
Q 002047 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (975)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~~ 830 (975)
+..++.... .....+.. ....+...+.+++..||+...+ +.+++++|||+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~h~~~~~~ 145 (219)
T d1g5ba_ 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (219)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred HHHhccccccHHHHcCchHHhhcccchhHHHHHHHHHHHhCccccccccCCCcEEEEECCCchh
Confidence 877654321 11111111 0112234566788888987654 56899999998754
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.53 E-value=4.1e-14 Score=148.22 Aligned_cols=127 Identities=16% Similarity=0.097 Sum_probs=83.7
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
+|.||||||||+..|.++|+.+..... ..+. -.+||+||+||||+++.||+.+|..|+.. .++++|+||||.+.+
T Consensus 2 ~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~--D~ii~~GDlvd~G~~~~evi~~l~~l~~~--~~v~~v~GNHD~~~~ 77 (251)
T d1nnwa_ 2 YVAVLANIAGNLPALTAALSRIEEMREEGYEI--EKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIA 77 (251)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTTCCE--EEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHH
T ss_pred EEEEEEccccCHHHHHHHHHHHHHhhccCCCC--cEEEEecCcCCCCCCcHHHHHHHHHHhhc--CCEEEEeccHHHHHH
Confidence 589999999999999999987643110 0000 16999999999999999999999998765 479999999998876
Q ss_pred hhhcCChHHHHHHhCCc----------ccchhhhhhhccccccceEEEE---cceEEEecCCccC
Q 002047 778 NALFGFRIECIERMGER----------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGR 829 (975)
Q Consensus 778 ~~~~gf~~e~~~~~g~~----------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~ 829 (975)
....++........... ....+-....+++..+|..... +.+++|+||++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~~ 142 (251)
T d1nnwa_ 78 MSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPIN 142 (251)
T ss_dssp HSCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSC
T ss_pred hccccccccchhhhhccchhHHHhhHHHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCccC
Confidence 54433221110000000 0001113344556677755432 4589999998643
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.08 E-value=9.7e-11 Score=119.80 Aligned_cols=74 Identities=11% Similarity=0.125 Sum_probs=61.6
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
..|.++|||||++++|.++++.+.....+ -+||+||++|||+.+.|+..++..|+... ..++.|+||||....
T Consensus 6 ~~i~~~sd~hg~~eale~~~~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~~~L~~~~-~pv~~i~GNHD~~~~ 78 (228)
T d1uf3a_ 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEAH-LPTAYVPGPQDAPIW 78 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGGC-SCEEEECCTTSCSHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCccchHHHHhhhhhcccc-ceEEEEecCCCchhh
Confidence 46889999999999999999876533333 68999999999999999999998887653 369999999998654
Q ss_pred h
Q 002047 778 N 778 (975)
Q Consensus 778 ~ 778 (975)
.
T Consensus 79 ~ 79 (228)
T d1uf3a_ 79 E 79 (228)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=3.3e-09 Score=105.38 Aligned_cols=70 Identities=19% Similarity=0.363 Sum_probs=54.3
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--------HHHHHHHHHhhhcCCCCEEEEe
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------LETITLLLALKVEYPNNVHLIR 769 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------~evl~ll~~lk~~~P~~v~llr 769 (975)
|+|.|||||||++.+|.++|+.+.....+ .+||+||++|+|+.+ .+++..+..+ ...++.++
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D------~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~ 71 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEV----AHKVIAVR 71 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT----GGGEEECC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCC------EEEEcCcccccCccchhhhccCcHHHHHHHHhc----CCcEEEec
Confidence 68999999999999999999887543333 799999999998754 3455554444 35799999
Q ss_pred ccccccch
Q 002047 770 GNHEAADI 777 (975)
Q Consensus 770 GNHE~~~~ 777 (975)
||||....
T Consensus 72 GNhD~~~~ 79 (184)
T d1su1a_ 72 GNCDSEVD 79 (184)
T ss_dssp CTTCCHHH
T ss_pred CCCCchhh
Confidence 99998543
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.65 E-value=1.4e-07 Score=91.97 Aligned_cols=64 Identities=19% Similarity=0.343 Sum_probs=48.8
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
|+|.|++||||++.+|.++++.+.....+ .++++||+++. +++..+..+. ..++.++||||...
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~~~~v~GN~D~~~ 64 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENLN----ANIIATYGNNDGER 64 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGCS----SEEEEECCTTCCCH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCC------EEEECCCccCH-----HHHHHHhhcC----ccEEEEcccccccc
Confidence 68999999999999999999876433333 79999999974 4555544432 46899999999743
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.34 E-value=2e-06 Score=84.97 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=43.7
Q ss_pred CCEEEEecCCCCHHH--HHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQFGD--LMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~--L~~ll~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
|+|.||+|+||+... |.+.+.. +.....+ .++++||+++ .|++.+|..+. ..++.++||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D------~Ii~~GDi~~-----~e~l~~l~~~~----~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCC------EEEEccCccc-----hhhHHHHHhhC----CceEEEeCCcCc
Confidence 679999999998644 3233322 2211122 6888999996 68999887763 258999999995
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.32 E-value=4.4e-06 Score=81.66 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=44.8
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
.+|.||+|+||++.+|.++++.+.- ..+ .++++||++..+...+ . ..++.++||||.
T Consensus 4 ~kI~viSD~Hgn~~al~~vl~~~~~-~~D------~iih~GD~~~~~~~~~-----------~--~~~~~V~GN~D~ 60 (173)
T d3ck2a1 4 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSELRPDSPL-----------W--EGIRVVKGNMDF 60 (173)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCSCTTCGG-----------G--TTEEECCCTTCC
T ss_pred CEEEEEeccCCCHHHHHHHHHHhhc-CCC------EEEECCcccCcccchh-----------h--cCCeEEecCccc
Confidence 5799999999999999999987632 222 6899999998765431 1 468999999995
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.30 E-value=2.2e-06 Score=85.50 Aligned_cols=125 Identities=21% Similarity=0.293 Sum_probs=81.1
Q ss_pred EEEEecCCCCHHH------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccc
Q 002047 700 IKIFGDLHGQFGD------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHE 773 (975)
Q Consensus 700 i~vvGDiHG~~~~------L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE 773 (975)
|.||+|+||+... |.++|+.-+ .+ .+|++||++++ |++.+|..++ ..++.++||||
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~---vD------~ii~~GDi~~~-----~~l~~l~~l~----~~v~~V~GN~D 67 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDK---IN------YVLCTGNVCSQ-----EYVEMLKNIT----KNVYIVSGDLD 67 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTT---CC------EEEECSCCCCH-----HHHHHHHHHC----SCEEECCCTTC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCC---CC------EEEECCCCCCH-----HHHHHHHhhC----CCEEEEcCCCC
Confidence 7899999986533 445554322 12 78999999974 8999888764 36899999999
Q ss_pred ccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEE--c-ceEEEecCCccCcccCHhhhhhccCCcccCCCC
Q 002047 774 AADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITMEAGS 850 (975)
Q Consensus 774 ~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~ 850 (975)
...... ..++...||....+ + .+++++||-...
T Consensus 68 ~~~~~~-----------------------~~~~~~~lp~~~~~~~~~~~i~l~H~~~~~--------------------- 103 (193)
T d2a22a1 68 SAIFNP-----------------------DPESNGVFPEYVVVQIGEFKIGLMHGNQVL--------------------- 103 (193)
T ss_dssp CSCCBC-----------------------CGGGTBCCCSEEEEEETTEEEEEECSTTSS---------------------
T ss_pred cchhhh-----------------------hHHHHhhCCccEEEEECCEEEEEEeccCCC---------------------
Confidence 743221 11233456644433 3 368888863211
Q ss_pred cceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCe
Q 002047 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH 917 (975)
Q Consensus 851 ~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~ 917 (975)
| ...++.+.++++..+.+++|-||.-++ ..+. .+++
T Consensus 104 ----------~-------------------~~~~~~l~~~~~~~~~dvvi~GHTH~~-~~~~-~~g~ 139 (193)
T d2a22a1 104 ----------P-------------------WDDPGSLEQWQRRLDCDILVTGHTHKL-RVFE-KNGK 139 (193)
T ss_dssp ----------S-------------------TTCHHHHHHHHHHHTCSEEEECSSCCC-EEEE-ETTE
T ss_pred ----------C-------------------CCCHHHHHHHHhhcCCCEEEEcCccCc-eEEE-ECCE
Confidence 0 113456778888999999999999885 3333 3554
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.23 E-value=4.9e-06 Score=85.23 Aligned_cols=73 Identities=11% Similarity=0.134 Sum_probs=52.7
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHH-----------------------
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITL----------------------- 753 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~l----------------------- 753 (975)
..+|++|+|||++++.|.++++.+.....+ -+|+.||++|.+..+.+...+
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D------~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~ 75 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 75 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhH
Confidence 457999999999999999988776533333 589999999988766543322
Q ss_pred ---HHHhhhcCCCCEEEEeccccccc
Q 002047 754 ---LLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 754 ---l~~lk~~~P~~v~llrGNHE~~~ 776 (975)
+..|+ ...-.++++.||||...
T Consensus 76 ~~~~~~L~-~~~~pv~~i~GNHD~~~ 100 (257)
T d2yvta1 76 DKFFREIG-ELGVKTFVVPGKNDAPL 100 (257)
T ss_dssp HHHHHHHH-TTCSEEEEECCTTSCCH
T ss_pred HHHHHHHH-hcCCcEEEEeCCCcchh
Confidence 22222 23457999999999753
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.14 E-value=0.00025 Score=74.99 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=47.7
Q ss_pred CCEEEEecCC-CC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhh---hcC
Q 002047 698 APIKIFGDLH-GQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALK---VEY 761 (975)
Q Consensus 698 ~~i~vvGDiH-G~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk---~~~ 761 (975)
|+++.++|+| |. +..|.++++.+.-...+ -+|++||++|++.-+.+.+..+..+. ...
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D------~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~ 74 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKEH 74 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHhhHHhc
Confidence 5789999999 32 33455555554322222 58889999999877777665543332 123
Q ss_pred CCCEEEEecccccc
Q 002047 762 PNNVHLIRGNHEAA 775 (975)
Q Consensus 762 P~~v~llrGNHE~~ 775 (975)
.-.|+++.||||..
T Consensus 75 ~i~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCCCccc
Confidence 34699999999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=96.88 E-value=0.00071 Score=66.34 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=29.6
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 733 DYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
.+++|||+..+-...-+.+.+|-+| +.+.++|+||||..
T Consensus 46 ~v~~LGD~~~~~~~~~~~~~~l~~L----~g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 46 TLYHLGDFTWHFNDKNEYLRIWKAL----PGRKILVMGNHDKD 84 (188)
T ss_dssp EEEECSCCBSCSCCTTSHHHHHHHS----SSEEEEECCTTCCC
T ss_pred EEEEeCCccccCCCHHHHHHHHHHC----CCceEEEecCCCch
Confidence 6889999987644444666666666 46789999999963
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=96.68 E-value=0.0013 Score=68.05 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=47.2
Q ss_pred CCEEEEecCC---------CC---HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCE
Q 002047 698 APIKIFGDLH---------GQ---FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNV 765 (975)
Q Consensus 698 ~~i~vvGDiH---------G~---~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v 765 (975)
|+|..|+|+| |. ...|.++++.+......-| -+|+.||++|+|. .+.+..+.++-...+-.+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D----~vv~~GDl~~~~~--~~~y~~~~~~l~~l~~p~ 74 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD----AVVVSGDIVNCGR--PEEYQVARQILGSLNYPL 74 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS----EEEEESCCBSSCC--HHHHHHHHHHHTTCSSCE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCC----EEEECcccCcCCc--chhHHHHHHHHhccCCCE
Confidence 5789999999 22 2446667766532211111 5888999999885 344455544444455679
Q ss_pred EEEecccccc
Q 002047 766 HLIRGNHEAA 775 (975)
Q Consensus 766 ~llrGNHE~~ 775 (975)
+++.||||..
T Consensus 75 ~~i~GNHD~~ 84 (271)
T d3d03a1 75 YLIPGNHDDK 84 (271)
T ss_dssp EEECCTTSCH
T ss_pred EEEecCccch
Confidence 9999999974
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.87 E-value=0.0039 Score=63.55 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=44.6
Q ss_pred cCCEEEEecCCC------C------HHHHHHHHHHhCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhc
Q 002047 697 KAPIKIFGDLHG------Q------FGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVE 760 (975)
Q Consensus 697 ~~~i~vvGDiHG------~------~~~L~~ll~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~ 760 (975)
.++|+.|.|||= . ...|.++++.+.. +..+ -+|..||+++.|... .+ ...+|..+...
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD------~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~ 77 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQ 77 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCS------EEEECSCCBSSCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCChhHHHHHHHHhhhhhhh
Confidence 357899999992 1 2346666665421 1112 577799999998643 12 23334334334
Q ss_pred CCCCEEEEeccccc
Q 002047 761 YPNNVHLIRGNHEA 774 (975)
Q Consensus 761 ~P~~v~llrGNHE~ 774 (975)
.+-.+++++||||.
T Consensus 78 ~~~p~~~v~GNHD~ 91 (256)
T d2hy1a1 78 LGAELVWVMGNHDD 91 (256)
T ss_dssp HTCEEEECCCTTSC
T ss_pred cCCCEEEEcccccc
Confidence 44579999999995
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=95.02 E-value=0.0089 Score=61.33 Aligned_cols=72 Identities=19% Similarity=0.204 Sum_probs=47.0
Q ss_pred CEEEEecCCCC-------------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCC----CChHHHHHHHH
Q 002047 699 PIKIFGDLHGQ-------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG----QHSLETITLLL 755 (975)
Q Consensus 699 ~i~vvGDiHG~-------------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG----~~s~evl~ll~ 755 (975)
++.||+|+|=. ...|.++++.+.....+ -+|++||++|.+ ....+.+..++
T Consensus 5 ~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~D------fVv~~GDl~~~~~~~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 5 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 78 (320)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCC------EEEECCCCCCCCCcchhHHHHHHHHHH
Confidence 58899999921 33455555544322222 588899999976 33445555555
Q ss_pred HhhhcCCCCEEEEeccccccc
Q 002047 756 ALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 756 ~lk~~~P~~v~llrGNHE~~~ 776 (975)
..-...+..++.+.||||...
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~ 99 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYN 99 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHH
T ss_pred HHHHHcCCCEEEecccCcccc
Confidence 544455677999999999754
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=94.08 E-value=0.46 Score=49.19 Aligned_cols=70 Identities=23% Similarity=0.197 Sum_probs=41.4
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEecccc-CCCC---Ch---HHHHHHHHHhhhcCCCCEEEEecc
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQ---HS---LETITLLLALKVEYPNNVHLIRGN 771 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyV-DRG~---~s---~evl~ll~~lk~~~P~~v~llrGN 771 (975)
++.|+||++-.......+.........- + -+|++||++ +.|. .. -+-+.++..+....| ++.++||
T Consensus 9 ~F~v~GD~g~~~~~~~~~~~~~~~~~~p-d----fvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P--~~~~~GN 81 (312)
T d2qfra2 9 TFGLIGDLGQSFDSNTTLSHYELSPKKG-Q----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAGN 81 (312)
T ss_dssp EEEEECSCCSBHHHHHHHHHHHHCSSCC-S----EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCCG
T ss_pred EEEEEeeCCCCCchHHHHHHHHHcCCCC-C----EEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcce--EEEeccc
Confidence 5799999988777665554432211111 1 477899997 2222 11 133444444444444 7899999
Q ss_pred cccc
Q 002047 772 HEAA 775 (975)
Q Consensus 772 HE~~ 775 (975)
||..
T Consensus 82 HD~~ 85 (312)
T d2qfra2 82 HEIE 85 (312)
T ss_dssp GGTC
T ss_pred cccc
Confidence 9964
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=92.86 E-value=5.1 Score=44.39 Aligned_cols=114 Identities=16% Similarity=0.141 Sum_probs=67.5
Q ss_pred CcEEEEECCCCc--EEEecCCC-----CCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFG-----EPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g-----~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.+|..+.+ |+.-.... .........+.+..+++||+... ...++.+|..+....|.... .+
T Consensus 76 ~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~g~l~Alda~tG~~~w~~~~-~~ 147 (560)
T d1kv9a2 76 SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQT-TD 147 (560)
T ss_dssp GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEEC-SC
T ss_pred CeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEEeC-------CCEEEEEECCCCcEEeccCc-cC
Confidence 478999999874 88532211 01122233456666778777643 24689999988766687643 22
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+-.++++ .+|+-+.......-..|..||..+....|+.-.
T Consensus 148 ~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t 196 (560)
T d1kv9a2 148 PAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (560)
T ss_dssp TTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred cccceeeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeeee
Confidence 2222223344456666 455533322333346799999999988887643
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=92.77 E-value=9 Score=42.34 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=66.9
Q ss_pred cCcEEEEECCCCc--EEEecCCCC-----CCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec
Q 002047 149 TADVHCYDVLTNK--WSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~-----~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
.+.|+++|..+++ |+.-..... ........+.+..++++|+... ...++.+|..+....|+.-...
T Consensus 86 ~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~-------~g~l~alda~tG~~~W~~~~~~ 158 (573)
T d1kb0a2 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFE 158 (573)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTT
T ss_pred CCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEec-------ccceeeeccccccceecccCcc
Confidence 3478999999874 875332210 0112223456667888877632 3468999998877678765322
Q ss_pred CCCCCCCcccEEEEeCCcEEEEEcCCCC-CCCCCcEEEEECCCCCcEEEEc
Q 002047 222 GPGPGPRYGHVMALVGQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 222 g~~P~~R~~h~~~~~~~~~lyV~GG~~g-~~~~ndv~~yDl~s~~~~W~~v 271 (975)
+....-....+.+++++ .+|+ |+... ...-..|..||..+....|+.-
T Consensus 159 ~~~~~~~~~~~p~v~~~-~viv-g~~~~~~~~~G~v~a~D~~TG~~~W~~~ 207 (573)
T d1kb0a2 159 GQKGSLTITGAPRVFKG-KVII-GNGGAEYGVRGYITAYDAETGERKWRWF 207 (573)
T ss_dssp TCCSSCBCCSCCEEETT-EEEE-CCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCcceEEeecceEEEec-cEEE-eeccccccccceEEEEecCCccceeeee
Confidence 22111112333456666 4554 54432 3335689999999998778754
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=91.90 E-value=3.9 Score=41.00 Aligned_cols=111 Identities=11% Similarity=0.072 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCC
Q 002047 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (975)
Q Consensus 238 ~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~ 317 (975)
++.+++.|+.++ .+..||..+. +-...-.... ..........++.+++.|+.++. +..++...
T Consensus 158 ~~~~l~sgs~d~-----~i~i~d~~~~--~~~~~~~~~~----~~i~~v~~~p~~~~l~~~~~d~~------v~~~d~~~ 220 (311)
T d1nr0a1 158 RPFRIISGSDDN-----TVAIFEGPPF--KFKSTFGEHT----KFVHSVRYNPDGSLFASTGGDGT------IVLYNGVD 220 (311)
T ss_dssp SSCEEEEEETTS-----CEEEEETTTB--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------EEEEETTT
T ss_pred ceeeeccccccc-----cccccccccc--cccccccccc----ccccccccCcccccccccccccc------cccccccc
Confidence 335677777654 5788999876 3333221111 11222333346677777775432 22333222
Q ss_pred CCeEEEEECCCCCCCCcce-----eeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 318 DGRWEWAIAPGVSPSPRYQ-----HAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 318 ~~~W~w~~~~g~~P~~R~~-----hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
. .-....... .....+ .++++. ++.+++.||.++ .|.+||+++++-.+
T Consensus 221 ~-~~~~~~~~~--~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg---------~v~iwd~~t~~~~~ 274 (311)
T d1nr0a1 221 G-TKTGVFEDD--SLKNVAHSGSVFGLTWSPDGTKIASASADK---------TIKIWNVATLKVEK 274 (311)
T ss_dssp C-CEEEECBCT--TSSSCSSSSCEEEEEECTTSSEEEEEETTS---------EEEEEETTTTEEEE
T ss_pred c-ccccccccc--ccccccccccccccccCCCCCEEEEEeCCC---------eEEEEECCCCcEEE
Confidence 2 111111110 111111 122332 467777777533 38899999886443
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.81 E-value=0.021 Score=58.60 Aligned_cols=25 Identities=4% Similarity=0.220 Sum_probs=21.0
Q ss_pred HHHHHHHHHHcCCeEEEEecccccc
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMD 908 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~ 908 (975)
...+.+.|+++++++++-||.-..+
T Consensus 200 ~~~~~~ll~~~~v~~~~~GH~H~~~ 224 (302)
T d1utea_ 200 VKQLLPLLTTHKVTAYLCGHDHNLQ 224 (302)
T ss_dssp HHHTHHHHHHTTCSEEEECSSSSEE
T ss_pred hhhhhHHHHhcCceEEEeCCCcceE
Confidence 4567889999999999999997644
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=90.25 E-value=8.3 Score=37.00 Aligned_cols=92 Identities=17% Similarity=0.217 Sum_probs=52.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
+.+.++|+.+++..+.-+.+. .-++++.- +.+||+.++. .+.+.+||+.+.. .-..++ ..
T Consensus 12 ~~v~v~D~~t~~~~~~i~~g~-----~p~~va~spdG~~l~v~~~~------~~~i~v~d~~t~~-~~~~~~------~~ 73 (301)
T d1l0qa2 12 DNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN-VIATVP------AG 73 (301)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE-EEEEEE------CS
T ss_pred CEEEEEECCCCeEEEEEECCC-----CceEEEEeCCCCEEEEEECC------CCEEEEEECCCCc-eeeeee------cc
Confidence 368889999998776544431 12344443 3478877654 3579999998863 112222 22
Q ss_pred CcccEEEEeCCc-EEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~~~~-~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..-+.++...++ .+++.+..+ ..+..+|..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 106 (301)
T d1l0qa2 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN 106 (301)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT
T ss_pred cccccccccccccccccccccc-----ceeeecccccc
Confidence 233444444433 455544322 35677788776
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=88.63 E-value=13 Score=37.19 Aligned_cols=193 Identities=12% Similarity=0.083 Sum_probs=93.2
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC-CCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG-PGP 225 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g-~~P 225 (975)
.+.+++||+.+..+..+.........-.-++++.. ++.+|+..+. +.+.++|+... ...+.... ...
T Consensus 45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~-------~~i~~~~~~g~---~~~~~~~~~~g~ 114 (314)
T d1pjxa_ 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTDGT---FEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETTSC---EEECCSBCTTSC
T ss_pred CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC-------CeEEEEeCCCc---EEEEEecccccc
Confidence 45799999999988776432100111113345544 3477776542 35888998765 33332111 111
Q ss_pred CCCcccEEEEeCCcEEEEEc--CCC--------CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC---
Q 002047 226 GPRYGHVMALVGQRYLMAIG--GND--------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG--- 292 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~G--G~~--------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g--- 292 (975)
..+.-...++-.++.||+-- +.. .......+|++++.. ++..+...... -...+....++
T Consensus 115 ~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---~~~~~~~~~~~----pNGi~~~~d~d~~~ 187 (314)
T d1pjxa_ 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---QMIQVDTAFQF----PNGIAVRHMNDGRP 187 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---CEEEEEEEESS----EEEEEEEECTTSCE
T ss_pred ccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC---ceeEeeCCcce----eeeeEECCCCCcce
Confidence 11122334454555788852 211 112245789998854 34443221110 11222222222
Q ss_pred -eEEEecCCCCCCCCccceEEeecCCCCeEEE----EECCCCCCCCcceeeEEE-eCCEEEEEcCcCCCCCccccCCcEE
Q 002047 293 -LLLLCGGRDASSVPLASAYGLAKHRDGRWEW----AIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVA 366 (975)
Q Consensus 293 -~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w----~~~~g~~P~~R~~hs~v~-~~~~L~V~GG~~~~~~~~~~~~dv~ 366 (975)
.||+..- ....+|.|+...++.-.+ ....+.. ...--++++ -++.|||..-. .+.|+
T Consensus 188 ~~lyv~d~------~~~~i~~~d~~~~g~~~~~~~~~~~~~~~--~~~pdGiavD~~GnlyVa~~~---------~g~I~ 250 (314)
T d1pjxa_ 188 YQLIVAET------PTKKLWSYDIKGPAKIENKKVWGHIPGTH--EGGADGMDFDEDNNLLVANWG---------SSHIE 250 (314)
T ss_dssp EEEEEEET------TTTEEEEEEEEETTEEEEEEEEEECCCCS--SCEEEEEEEBTTCCEEEEEET---------TTEEE
T ss_pred eEEEEEee------cccceEEeeccCccccceeeEEEEccccc--cccceeeEEecCCcEEEEEcC---------CCEEE
Confidence 5777532 234567775444443322 2222211 111123333 25788886311 34599
Q ss_pred EEECCCCeE
Q 002047 367 VLDTAAGVW 375 (975)
Q Consensus 367 ~yD~~t~~W 375 (975)
+||+++...
T Consensus 251 ~~dp~~g~~ 259 (314)
T d1pjxa_ 251 VFGPDGGQP 259 (314)
T ss_dssp EECTTCBSC
T ss_pred EEeCCCCEE
Confidence 999987653
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.45 E-value=15 Score=36.39 Aligned_cols=177 Identities=12% Similarity=0.075 Sum_probs=79.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+............ .....-...+.. ++.+++.|+. ...+.++|+.+.. .+.... .....
T Consensus 120 ~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~------d~~i~~~~~~~~~-~~~~~~-----~~~~~ 185 (337)
T d1gxra_ 120 TLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQT-LVRQFQ-----GHTDG 185 (337)
T ss_dssp EEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE-EEEEEC-----CCSSC
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccc------ccccccccccccc-cccccc-----ccccc
Confidence 6778888776654433220 011111222222 3455555553 2468889988753 122221 11111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
-.+++...++..++.|+.++ .+..||+.+. +-........ ...+.+...++.+++.|+.++.
T Consensus 186 v~~l~~s~~~~~~~~~~~d~-----~v~i~d~~~~--~~~~~~~~~~-----~i~~l~~~~~~~~l~~~~~d~~------ 247 (337)
T d1gxra_ 186 ASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESSN------ 247 (337)
T ss_dssp EEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTSC------
T ss_pred cccccccccccccccccccc-----cccccccccc--eeeccccccc-----ceEEEEEcccccccceeccccc------
Confidence 12222323335666676553 6788898876 3211111111 1122222345666677765432
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
+..++........ ... . ... -.++.+. ++++++.|+.+ +.|.+||..+++
T Consensus 248 i~i~d~~~~~~~~--~~~-~--~~~-i~~v~~s~~g~~l~s~s~D---------g~i~iwd~~~~~ 298 (337)
T d1gxra_ 248 VEVLHVNKPDKYQ--LHL-H--ESC-VLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGA 298 (337)
T ss_dssp EEEEETTSSCEEE--ECC-C--SSC-EEEEEECTTSSEEEEEETT---------SEEEEEETTTCC
T ss_pred ccccccccccccc--ccc-c--ccc-cceEEECCCCCEEEEEeCC---------CeEEEEECCCCC
Confidence 3334333332211 111 0 111 1222222 56677777753 237788887764
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=86.23 E-value=2.4 Score=41.59 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=55.2
Q ss_pred EEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEe
Q 002047 234 ALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGL 313 (975)
Q Consensus 234 ~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~ 313 (975)
+...++.+++.|+.++ .+..||+.+. +...+...... ..-.......++..++.|+.++. ++.+
T Consensus 143 ~~s~~~~~l~~g~~dg-----~i~~~d~~~~--~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d~~------i~~~ 206 (299)
T d1nr0a2 143 ALSNDKQFVAVGGQDS-----KVHVYKLSGA--SVSEVKTIVHP---AEITSVAFSNNGAFLVATDQSRK------VIPY 206 (299)
T ss_dssp EECTTSCEEEEEETTS-----EEEEEEEETT--EEEEEEEEECS---SCEEEEEECTTSSEEEEEETTSC------EEEE
T ss_pred cccccccccccccccc-----cccccccccc--ccccccccccc---ccccccccccccccccccccccc------cccc
Confidence 3334446777777664 6888898777 54443222110 11122222345666677765432 4444
Q ss_pred ecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 314 AKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 314 ~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+....... ............-.++++. ++.+++.||.++ .|.+||+++...
T Consensus 207 ~~~~~~~~--~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg---------~i~iwd~~~~~~ 258 (299)
T d1nr0a2 207 SVANNFEL--AHTNSWTFHTAKVACVSWSPDNVRLATGSLDN---------SVIVWNMNKPSD 258 (299)
T ss_dssp EGGGTTEE--SCCCCCCCCSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTCTTS
T ss_pred cccccccc--cccccccccccccccccccccccceEEEcCCC---------EEEEEECCCCCc
Confidence 43332111 1111110011111222332 567788887643 388899887654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.04 E-value=10 Score=38.05 Aligned_cols=92 Identities=14% Similarity=0.093 Sum_probs=46.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..+|..+.++...... .... -.+.... ++..++.|+. ...+.++|..+.. -.... . ....
T Consensus 144 ~v~i~~~~~~~~~~~~~~---h~~~-v~~~~~~~~~~~~~~~~~------~~~i~~~d~~~~~--~~~~~-~----~~~~ 206 (388)
T d1erja_ 144 LIRIWDIENRKIVMILQG---HEQD-IYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQ--CSLTL-S----IEDG 206 (388)
T ss_dssp CEEEEETTTTEEEEEECC---CSSC-EEEEEECTTSSEEEEEET------TSEEEEEETTTTE--EEEEE-E----CSSC
T ss_pred cccccccccccccccccc---cccc-cccccccccccccccccc------ceeeeeeeccccc--ccccc-c----cccc
Confidence 577788887776554322 1111 1122222 2344455543 3468889988752 11111 1 1111
Q ss_pred ccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
...+... .++.+++.|+.++ .+..||..+.
T Consensus 207 ~~~~~~~~~~~~~l~~~~~d~-----~i~i~~~~~~ 237 (388)
T d1erja_ 207 VTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETG 237 (388)
T ss_dssp EEEEEECSTTCCEEEEEETTS-----CEEEEETTTC
T ss_pred cccccccCCCCCeEEEEcCCC-----eEEEeecccC
Confidence 1222222 2335777777654 5888898876
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.02 E-value=13 Score=35.85 Aligned_cols=142 Identities=11% Similarity=0.107 Sum_probs=68.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+..||+.+.+-...... .. ..-.+....++ +++.|+. ...+.+||+.... ....+. .......
T Consensus 197 g~i~~~d~~~~~~~~~~~~---~~-~~v~~~~~~~~-~l~s~s~------d~~i~iwd~~~~~-~~~~~~---~~~~~~~ 261 (342)
T d2ovrb2 197 TSIRVWDVETGNCIHTLTG---HQ-SLTSGMELKDN-ILVSGNA------DSTVKIWDIKTGQ-CLQTLQ---GPNKHQS 261 (342)
T ss_dssp SCEEEEETTTCCEEEEECC---CC-SCEEEEEEETT-EEEEEET------TSCEEEEETTTCC-EEEEEC---STTSCSS
T ss_pred CeEEEeecccceeeeEecc---cc-cceeEEecCCC-EEEEEcC------CCEEEEEeccccc-cccccc---ccceeee
Confidence 4678888887664433221 11 11122333344 5555553 3568999988753 222222 1122223
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
...+....+ .+++.|+.++ .|..||+.+.....+ +...........-.......++.+++.|+.++.....--
T Consensus 262 ~~~~~~~~~-~~~~s~s~Dg-----~i~iwd~~tg~~i~~-~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~ 334 (342)
T d2ovrb2 262 AVTCLQFNK-NFVITSSDDG-----TVKLWDLKTGEFIRN-LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLL 334 (342)
T ss_dssp CEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEE-EEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEE
T ss_pred ceeecccCC-CeeEEEcCCC-----EEEEEECCCCCEEEE-EecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEE
Confidence 333344555 5777777664 688999988732222 211111000001112222345677788887765433334
Q ss_pred eEEe
Q 002047 310 AYGL 313 (975)
Q Consensus 310 ~~~~ 313 (975)
+|.|
T Consensus 335 ~~Df 338 (342)
T d2ovrb2 335 VLDF 338 (342)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 4444
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=84.61 E-value=13 Score=36.08 Aligned_cols=106 Identities=14% Similarity=0.045 Sum_probs=51.9
Q ss_pred CcEEEEECCCCcEEE-ecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNKWSR-ITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~-l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
+.+.+||+.+.+-.. +.... ....-++++.- +..+|+.|.. ...+++||+.+....++ +........
T Consensus 11 ~~v~v~D~~s~~~~~~i~~~~---~~~~~~~i~~spDg~~l~v~~~~------~~~v~v~D~~t~~~~~~-~~~~~~~~~ 80 (337)
T d1pbyb_ 11 DKLVVIDTEKMAVDKVITIAD---AGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGR-IDLSTPEER 80 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT---CTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEE-EECCBTTEE
T ss_pred CEEEEEECCCCeEEEEEECCC---CCCCccEEEECCCCCEEEEEECC------CCeEEEEECCCCcEEEE-EecCCCccc
Confidence 578999999876333 33211 11222233333 3477887653 35799999998642222 211111111
Q ss_pred CCcccEEEEe-CCcEEEEEcCCCC------CCCCCcEEEEECCCCC
Q 002047 227 PRYGHVMALV-GQRYLMAIGGNDG------KRPLADVWALDTAAKP 265 (975)
Q Consensus 227 ~R~~h~~~~~-~~~~lyV~GG~~g------~~~~ndv~~yDl~s~~ 265 (975)
...-+.+++. +++.+|+.+.... ......+..+|..+..
T Consensus 81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 126 (337)
T d1pbyb_ 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe
Confidence 1122233333 3335555443211 1123567788888873
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.44 E-value=22 Score=34.00 Aligned_cols=176 Identities=11% Similarity=0.060 Sum_probs=83.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~ 230 (975)
.+..+|..+......... ..............++.|+. ...+.++|+.... .+.. +......
T Consensus 118 ~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------d~~i~~~d~~~~~----~~~~---~~~~~~~ 179 (342)
T d2ovrb2 118 TLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET----CLHT---LQGHTNR 179 (342)
T ss_dssp EEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE----EEEE---ECCCSSC
T ss_pred eEEEeecccccceeeeec-----ccccceeeccccceeeeecC------CCeEEEeecccce----eeEE---EcCcccc
Confidence 355566665554443222 11122233333444455543 2457788877642 1111 1111122
Q ss_pred cEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccce
Q 002047 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (975)
Q Consensus 231 h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~ 310 (975)
......++ ..++.|+.++ .+..||+... +-........ ..-.++.. ++.+++.|+.++. +
T Consensus 180 ~~~~~~~~-~~l~s~~~dg-----~i~~~d~~~~--~~~~~~~~~~-----~~v~~~~~-~~~~l~s~s~d~~------i 239 (342)
T d2ovrb2 180 VYSLQFDG-IHVVSGSLDT-----SIRVWDVETG--NCIHTLTGHQ-----SLTSGMEL-KDNILVSGNADST------V 239 (342)
T ss_dssp EEEEEECS-SEEEEEETTS-----CEEEEETTTC--CEEEEECCCC-----SCEEEEEE-ETTEEEEEETTSC------E
T ss_pred cccccCCC-CEEEEEeCCC-----eEEEeecccc--eeeeEecccc-----cceeEEec-CCCEEEEEcCCCE------E
Confidence 33334455 5667777665 5788898876 3222211111 11223333 4456666665432 3
Q ss_pred EEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
..++............ .. .......++..++.+++.|+.++ .|.+||+++++..
T Consensus 240 ~iwd~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~s~s~Dg---------~i~iwd~~tg~~i 293 (342)
T d2ovrb2 240 KIWDIKTGQCLQTLQG--PN-KHQSAVTCLQFNKNFVITSSDDG---------TVKLWDLKTGEFI 293 (342)
T ss_dssp EEEETTTCCEEEEECS--TT-SCSSCEEEEEECSSEEEEEETTS---------EEEEEETTTCCEE
T ss_pred EEEecccccccccccc--cc-eeeeceeecccCCCeeEEEcCCC---------EEEEEECCCCCEE
Confidence 3444333322222211 11 12223334445667778887533 3889999988754
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=82.38 E-value=5.1 Score=39.80 Aligned_cols=147 Identities=11% Similarity=-0.003 Sum_probs=71.6
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
.++++||..+.. ..++. -..|..+ ++.- +++.|++.|+.++ ..++++|..+. .-.++.....
T Consensus 24 g~v~v~d~~~~~--~~~~~-----~~~~v~~-~~~spDg~~l~~~~~~~g----~~v~v~d~~~~--~~~~~~~~~~--- 86 (360)
T d1k32a3 24 GQAFIQDVSGTY--VLKVP-----EPLRIRY-VRRGGDTKVAFIHGTREG----DFLGIYDYRTG--KAEKFEENLG--- 86 (360)
T ss_dssp TEEEEECTTSSB--EEECS-----CCSCEEE-EEECSSSEEEEEEEETTE----EEEEEEETTTC--CEEECCCCCC---
T ss_pred CeEEEEECCCCc--EEEcc-----CCCCEEE-EEECCCCCEEEEEEcCCC----CEEEEEECCCC--cEEEeeCCCc---
Confidence 468889887753 44432 1223322 2222 4434444444332 34899999988 6666543322
Q ss_pred CcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEE-eCCEEEEEcCcCCCCC-
Q 002047 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGR- 357 (975)
Q Consensus 280 ~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~-~~~~L~V~GG~~~~~~- 357 (975)
.....+...+++.+++++.+. .++.++......+....... .....+++ -+++.+++++......
T Consensus 87 --~v~~~~~spdg~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~la~~~~~~~~~~ 153 (360)
T d1k32a3 87 --NVFAMGVDRNGKFAVVANDRF------EIMTVDLETGKPTVIERSRE-----AMITDFTISDNSRFIAYGFPLKHGET 153 (360)
T ss_dssp --SEEEEEECTTSSEEEEEETTS------EEEEEETTTCCEEEEEECSS-----SCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred --eEEeeeecccccccceecccc------ccccccccccceeeeeeccc-----ccccchhhccceeeeeeeccccccce
Confidence 233334455777777776543 34444444443332222211 11112222 2556666554332211
Q ss_pred ccccCCcEEEEECCCCeEEE
Q 002047 358 MVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 358 ~~~~~~dv~~yD~~t~~W~~ 377 (975)
.......++++|..+.+=..
T Consensus 154 ~~~~~~~~~v~d~~~~~~~~ 173 (360)
T d1k32a3 154 DGYVMQAIHVYDMEGRKIFA 173 (360)
T ss_dssp CSCCEEEEEEEETTTTEEEE
T ss_pred eeccccceeeeccccCceee
Confidence 11123458889998875443
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.35 E-value=19 Score=34.81 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=49.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||..+.+....... .... ..+.... .+..++.|+. ...+.+||..+.. ..... .+ ..
T Consensus 181 ~~i~~~d~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~------d~~i~i~d~~~~~--~~~~~-~~----h~ 243 (355)
T d1nexb2 181 NTLIVWDVAQMKCLYILSG---HTDR-IYSTIYDHERKRCISASM------DTTIRIWDLENGE--LMYTL-QG----HT 243 (355)
T ss_dssp SCEEEEETTTTEEEEEECC---CSSC-EEEEEEETTTTEEEEEET------TSCEEEEETTTCC--EEEEE-CC----CS
T ss_pred ceeeeeecccccceeeeec---cccc-cccccccccceeeecccc------cceEEeeeccccc--ccccc-cc----cc
Confidence 3677888887765544332 1112 2222222 3455555553 2468899998763 21111 11 11
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..-.++.+.+ .+++.|+.++ .+..||+.+.
T Consensus 244 ~~v~~~~~~~-~~l~~~~~dg-----~i~iwd~~~~ 273 (355)
T d1nexb2 244 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDY 273 (355)
T ss_dssp SCCCEEEECS-SEEEEECTTS-----EEEEEETTTC
T ss_pred cccccccccc-ceeeeeeccc-----cccccccccc
Confidence 2223445566 4677777665 5788898776
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=80.08 E-value=46 Score=36.19 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=63.9
Q ss_pred cEEEEEC-CCC--cEEEecCCCC-----CCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 151 DVHCYDV-LTN--KWSRITPFGE-----PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 151 dv~~yD~-~t~--~W~~l~~~g~-----~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
.++.+|. .|+ .|+.-..... ........+.+..+++||+... ...++.+|..+....|..-.. .
T Consensus 74 ~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~~~-------~g~l~alda~tG~~~w~~~~~-~ 145 (571)
T d2ad6a1 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVC-D 145 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC-C
T ss_pred eEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceeeCCeEEEEeC-------CCcEEeeehhhhhhhcccccc-c
Confidence 5777886 344 4765322210 0000112245667788887532 357899999988666875321 1
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
..+......+-+++++ .+|+-+..........|..||..+....|+.-
T Consensus 146 ~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 193 (571)
T d2ad6a1 146 PKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp GGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred cccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEEEEEe
Confidence 1122222334456776 67765443333345689999999998899754
|