Citrus Sinensis ID: 002049

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-----
Protein Sequence
MAQIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPARRIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEEEcccEEEEccEEEEEcccEEEEEEcccEEEEEEEEEEEEEcEEEEEEEcEEEEEEcEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEEEEEEEccccccccccccccccEEEEEEEEEEcEEEEEccccccccccccEEEEEEEEEccccEEEEEccccccccccccccEEEEEcccccEEEEccccccccccccccccccccEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEccEEEEEcccccccHHHHHHHHHcccccEEEEcccEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEcEEEEEcccEEEEcccEEEEccEEEEEcccccEEEEcEEEEEEEEEEEEccccEEcccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEEcccccccccccEEccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccEEEEEEccccccEEEEEEEEEccccccHHcccccccccccccccccccccHHHHHHHHHHcccccEEEEEcccccccccccccccEEEEEEccccccccccccccEEEEEEccccccccccccccccEEEEccccccccccccEEcccccEEEEcccccccccccccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHccccccccccccEEEEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHEEccccccccccccEEEccccccccccccccccccccccccccccccHHHccccccccEEEEEEEEEEEccccEEEEEcEEEEEcccEEEEEccccEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEccccEEEEccccccccccccccccccccccccccccccEEEEcccccccccccccEEEHHcccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEcccccccccccccccEEEEEEEEEEccEEEEEccccccccccccEEEEEEEEcccccEEEEEccccccccccccccccEEcccccEEEEEcccccccccccccccccccccEEEEEEcccEEEEEEEEEEEEEEEEEEEEcccEEEEccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccEEEEcccccEEEEEEEEEEcEEEEEEcccEEEEcccccEccccEEEccccccHHHHHEEEEHHEEEEEEccccEEEccccccccccccccEccccccccHHHccccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEEcccccccccccccEcccccccccccccccccEEEcccEEcccccccccccccEcccccccccccccccccEEEEEcccccccccEEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEccccccccEcccccccccEEEEEEccccccccEEEEEEEEEEEEEccccccccccccccccEcccccccccEEEEEcccccccEEccccccHHHcccccHHHccccEEEEEEcccccccccccEEccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccHHHccccEEEEEEccccccccccccccccHHHHHHcc
Coil and Loop (DISEMBL)
MAQIFLIFTILIFFSLEtslsldqynfpvigfgadslfhgdytppsppppiapphppslscqrdlggvgTLETVCLLnssltfenddiyvegsgnlhilpgvtlccpikgcllTINVTGefllgrnseivAGTVYVSALNAsfssgsvvnatglggeppaetsgtpdgvqgaggghggrgasclvdnmklpddvwggdpyswssleepwsygskggttfkgenfggdgggrIRLEVVNEIevngslladggdvgvkggggsggSIYVKAHRmtgngkisasggngfagggggRVSINVFsrhdgaevcvhggrsfgcpenagaagtyydavprrlfvsndnlptntdtlllefpkqqlwtnvyirdnakasvpLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESsvirsdanlgvngqgflnlsgpgdmIEAQRLILSLFFSinvgpgsvlqgpsenasnndtkprlycdrhdcpvellhpledcnlnsslSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASgaisasglgcthgvgrgkvfdnglggggghggkggqgyfngsfidggatygdanlpcelgsgsgndnlagaiaGGGIVVMGSLEHSLTSLSVYgsiradgesfEEEIHQQDGrlistvgpgggsggTILLFIHTLVlgesssisttggrgshsggggggggrihfhwsdipigdeylplasvngsidargglgrgqglaggngtvtgkacprglygvfceecpvgtfknvsgsdralcrncssnelphralyipirggvtecpcpykcvseryhmphcyTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKymggdelpalvparridhsfpflESLNEVMetnrteesqsHVHRMYFMgqntfsepwhlphsppeqvieiv
Flexible Loop (DISEMBL)
MAQIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNgslladggdvgvKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGtfknvsgsdrALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPARRIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSepwhlphsppeqvieiv
Low Complexity Region (SEG)
MAQifliftiliffSLETSLSLDQYNFPVIGFGADSLFHGDYTppsppppiapphppSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDgvqgaggghggrgASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFggdgggRIRLEVVNEIEVNGSLLAdggdvgvkggggsggsIYVKAHRMTGNGKISASggngfagggggRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSndnlptntdtlllEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSvvhfhlvrtvvvQASGAISASGLGCTHGVGRGKVFDNglggggghggkggqgyfngSFIDGGATYGDANLPCELGSGSGNDNLagaiagggiVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVgpgggsggTILLFIHTLVLGEsssisttggrgshsggggggggrihFHWSDIPIGDEYLPLASVNGSIDargglgrgqglaggngTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWlfglillgllillalvlsvaRMKYMGGDELPALVPARRIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV
Disordered region (IsUnstruct)
**QIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHG***********************DLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSS***********************************ASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLL*************************************************NVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPG*****************RLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKV******************YFNGSFIDGGATYGDAN**********************************SLSVYGSI****************RLISTVGPGGGSGGTILLFIHTLVLG************************IHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPARRIDHSFPFLESL*****************RMYFMGQ*********************
Disordered Region (DISOPRED)
**QIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDY*********************DLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEP*************AGGGHG****************VWGGDPYSWSSLEEPWSYG***************GGGRIRLEVVNEIEVNGSLLAD************GGSIYVKAHRMTGNGKISA*******GGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVL***************LYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGR***************GKGGQGYFNGSFIDGGATYGDANLP********************IVVMGSLEHSLTSLSVYGSI****************************GGTILLFIHTLVLGES*********************RIHFHWSDIPIGDEYLPLASVNGSID************GGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKY*************RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPP***IEIV
Disordered Region (DISEMBL)
MAQIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQ**********TKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLVLGES*****************GGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPARRIDHSFPFLESLNEVM*********SHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV
Disordered Region (DISPRO)
*AQIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPH*PSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSK*GT*F*GENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGS******L*GAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFE***********S******GSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPARRIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQIFLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPARRIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	975
449446813	1431	PREDICTED: uncharacterized protein LOC10	0.981	0.668	0.708	0.0
449488157	1431	PREDICTED: uncharacterized protein LOC10	0.981	0.668	0.707	0.0
296081597	1439	unnamed protein product [Vitis vinifera]	0.965	0.653	0.688	0.0
359475929	1416	PREDICTED: uncharacterized protein LOC10	0.965	0.664	0.688	0.0
356527738	1441	PREDICTED: uncharacterized protein LOC10	0.989	0.669	0.705	0.0
356511399	1411	PREDICTED: uncharacterized protein LOC10	0.987	0.682	0.706	0.0
224088972	1412	predicted protein [Populus trichocarpa]	0.993	0.686	0.657	0.0
255550884	1426	conserved hypothetical protein [Ricinus	0.968	0.661	0.671	0.0
356515645	1417	PREDICTED: uncharacterized protein LOC10	0.961	0.661	0.673	0.0
356510059	1447	PREDICTED: uncharacterized protein LOC10	0.961	0.647	0.673	0.0

>gi|449446813|ref|XP_004141165.1| PREDICTED: uncharacterized protein LOC101212069 [Cucumis sativus]

 Score = 1147 bits (2967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/974 (70%), Positives = 803/974 (82%), Gaps = 17/974 (1%)

Query: 5   FLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRD 64
           FL F+I + F      S+  Y+             GDY+PPSPPPP   PHPPS SC+ D
Sbjct: 19  FLTFSICVEFDYGDEFSIISYD-------------GDYSPPSPPPPTPFPHPPSFSCEGD 65

Query: 65  LGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLG 124
           L G+G+L  +C LNSSL+F  DD+Y+EG+G+L+IL GV+L CP+ GC + IN++ +F LG
Sbjct: 66  LKGIGSLNKICELNSSLSF-GDDVYIEGNGSLYILSGVSLSCPVMGCTIQINMSRDFSLG 124

Query: 125 RNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCL 184
            NS IVAG++ + ALN S   GSVVN T L G PPA+TSGTP G QGAGGGHGGRGASC+
Sbjct: 125 HNSLIVAGSLRIDALNISLVDGSVVNVTALAGNPPAQTSGTPSGYQGAGGGHGGRGASCV 184

Query: 185 VDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNG 244
            DN KLPDDVWGGD YSWSSL EPWS+GSKGGTT K E++GG+GGGRI LE  N IEV+G
Sbjct: 185 TDNTKLPDDVWGGDTYSWSSLHEPWSFGSKGGTTVKEESYGGEGGGRIWLETKNSIEVSG 244

Query: 245 SLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDG 304
           +L ADGGD G+KGGGGSGGSIY+KA RMTG+G++S  GGNGFAGGGGGR+SINVFSRHD 
Sbjct: 245 NLYADGGDGGIKGGGGSGGSIYIKAQRMTGSGRLSTVGGNGFAGGGGGRISINVFSRHDN 304

Query: 305 AEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYI 364
            E   HGG+S+GC ENAGAAGTYYDAVPR L VSNDNL T TDTLLL FPKQ LWTNVYI
Sbjct: 305 TEFFAHGGKSYGCSENAGAAGTYYDAVPRSLIVSNDNLSTQTDTLLLTFPKQPLWTNVYI 364

Query: 365 RDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGA 424
           +++AKA VPLFWSRVQV+GQIHLS GAVLSFGLAHYA+SEFEL+AEELLMS+S++KIYGA
Sbjct: 365 QNHAKALVPLFWSRVQVQGQIHLSVGAVLSFGLAHYASSEFELIAEELLMSNSVIKIYGA 424

Query: 425 LRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNL 484
           LRM VKMHLMWNSK+LID GD+ I+ATSLLEA+NL+VLKESS I S+ANLGV+GQG+LNL
Sbjct: 425 LRMFVKMHLMWNSKILIDGGDNEIVATSLLEASNLLVLKESSSIHSNANLGVHGQGYLNL 484

Query: 485 SGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLE 544
           +GPG++IEAQRLILSLFFSI VGP S L+GP +++ +N+T+PRLYC+  DCP ELLHP E
Sbjct: 485 TGPGNLIEAQRLILSLFFSIYVGPKSFLRGPLDDSKSNNTRPRLYCELSDCPAELLHPPE 544

Query: 545 DCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGR 604
           DCN+NSSL FTLQICR E++ +EG I GSV+HFH VR + V  SGAISASGLGCT GVGR
Sbjct: 545 DCNVNSSLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLGCTGGVGR 604

Query: 605 GKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGG 664
           G++F NGLG GGGHGGKGG GY+NG+FIDGG  YGD +LPCELGSGSGN +LAG  AGGG
Sbjct: 605 GRIFANGLGAGGGHGGKGGDGYYNGTFIDGGVAYGDPDLPCELGSGSGNGSLAGETAGGG 664

Query: 665 IVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLV 724
           I+VMGSLEHS+ SLS+ GS+RADGE+F   +  + G  +  VGPGGGSGGTILLF+ T+ 
Sbjct: 665 IIVMGSLEHSVVSLSLNGSLRADGETFGRVVGGKGGGELLNVGPGGGSGGTILLFVQTVS 724

Query: 725 LGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQ 784
           L ESS IS  GG+GS +GGGGGGGGR+HFHWSDIP+GD Y P+ASV G+I   GGLG   
Sbjct: 725 LSESSVISAVGGQGSSNGGGGGGGGRVHFHWSDIPVGDAYQPIASVKGNIYTGGGLGSSH 784

Query: 785 GLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIR 844
           G  G NGT+TGKACPRGLYG+FCEECP+GTFKN +GSDR LC  C S ELP+R +Y+ IR
Sbjct: 785 GSDGENGTITGKACPRGLYGIFCEECPLGTFKNATGSDRGLCTKCPSYELPNRGIYVSIR 844

Query: 845 GGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMK 904
           GGV + PCPY+C+S+RYHMP CYT LEELVY FGGPWLFGLIL+GLLILLALVLSVARMK
Sbjct: 845 GGVAKRPCPYRCISDRYHMPQCYTALEELVYAFGGPWLFGLILVGLLILLALVLSVARMK 904

Query: 905 YMGGDELPALVPAR---RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPW 961
           Y+GGDELPA VP R   RID+SFPFLESLNEV+ETNRTEES+SHVHRMYFMG N+FSEPW
Sbjct: 905 YVGGDELPATVPVRQSSRIDYSFPFLESLNEVLETNRTEESKSHVHRMYFMGPNSFSEPW 964

Query: 962 HLPHSPPEQVIEIV 975
           HL HSPPEQV EIV
Sbjct: 965 HLSHSPPEQVAEIV 978

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449488157|ref|XP_004157954.1| PREDICTED: uncharacterized protein LOC101231590 [Cucumis sativus]

 Score = 1146 bits (2964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/974 (70%), Positives = 803/974 (82%), Gaps = 17/974 (1%)

Query: 5   FLIFTILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRD 64
           FL F+I + F      S+  Y+             GDY+PPSPPPP   PHPPS SC+ D
Sbjct: 19  FLTFSICVEFDYGDEFSIISYD-------------GDYSPPSPPPPAPFPHPPSFSCEGD 65

Query: 65  LGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLG 124
           L G+G+L  +C LNSSL+F  DD+Y+EG+G+L+IL GV+L CP+ GC + IN++ +F LG
Sbjct: 66  LKGIGSLNKICELNSSLSF-GDDVYIEGNGSLYILSGVSLSCPVMGCTIQINMSRDFSLG 124

Query: 125 RNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCL 184
            NS IVAG++ + ALN S   GSVVN T L G PPA+TSGTP G QGAGGGHGGRGASC+
Sbjct: 125 HNSLIVAGSLRIDALNISLVDGSVVNVTALAGNPPAQTSGTPSGYQGAGGGHGGRGASCV 184

Query: 185 VDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNG 244
            DN KLPDDVWGGD YSWSSL EPWS+GSKGGTT K E++GG+GGGRI LE  N IEV+G
Sbjct: 185 TDNTKLPDDVWGGDTYSWSSLHEPWSFGSKGGTTVKEESYGGEGGGRIWLETKNSIEVSG 244

Query: 245 SLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDG 304
           +L ADGGD G+KGGGGSGGSIY+KA RMTG+G++S  GGNGFAGGGGGR+SINVFSRHD 
Sbjct: 245 NLYADGGDGGIKGGGGSGGSIYIKAQRMTGSGRLSTVGGNGFAGGGGGRISINVFSRHDN 304

Query: 305 AEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYI 364
            E   HGG+S+GC ENAGAAGTYYDAVPR L VSNDNL T TDTLLL FPKQ LWTNVYI
Sbjct: 305 TEFFAHGGKSYGCSENAGAAGTYYDAVPRSLIVSNDNLSTQTDTLLLTFPKQPLWTNVYI 364

Query: 365 RDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGA 424
           +++AKA VPLFWSRVQV+GQIHLS GAVLSFGLAHYA+SEFEL+AEELLMS+S++KIYGA
Sbjct: 365 QNHAKALVPLFWSRVQVQGQIHLSVGAVLSFGLAHYASSEFELIAEELLMSNSVIKIYGA 424

Query: 425 LRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNL 484
           LRM VKMHLMWNSK+LID GD+ I+ATSLLEA+NL+VLKESS I S+ANLGV+GQG+LNL
Sbjct: 425 LRMFVKMHLMWNSKILIDGGDNEIVATSLLEASNLLVLKESSSIHSNANLGVHGQGYLNL 484

Query: 485 SGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLE 544
           +GPG++IEAQRLILSLFFSI VGP S L+GP +++ +N+T+PRLYC+  DCP ELLHP E
Sbjct: 485 TGPGNLIEAQRLILSLFFSIYVGPKSFLRGPLDDSKSNNTRPRLYCELSDCPAELLHPPE 544

Query: 545 DCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGR 604
           DCN+NS+L FTLQICR E++ +EG I GSV+HFH VR + V  SGAISASGLGCT GVGR
Sbjct: 545 DCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLGCTGGVGR 604

Query: 605 GKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGG 664
           G++F NGLG GGGHGGKGG GY+NG+FIDGG  YGD +LPCELGSGSGN +LAG  AGGG
Sbjct: 605 GRIFANGLGAGGGHGGKGGDGYYNGTFIDGGVAYGDPDLPCELGSGSGNGSLAGETAGGG 664

Query: 665 IVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLV 724
           I+VMGSLEHS+ SLS+ GS+RADGE+F   +  + G  +  VGPGGGSGGTILLF+ T+ 
Sbjct: 665 IIVMGSLEHSVVSLSLNGSLRADGETFGRVVGGKGGGELLNVGPGGGSGGTILLFVQTVS 724

Query: 725 LGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQ 784
           L ESS IS  GG+GS +GGGGGGGGR+HFHWSDIP+GD Y P+ASV G+I   GGLG   
Sbjct: 725 LSESSVISAVGGQGSSNGGGGGGGGRVHFHWSDIPVGDAYQPIASVKGNIYTGGGLGSSH 784

Query: 785 GLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIR 844
           G  G NGT+TGKACPRGLYG+FCEECP+GTFKN +GSDR LC  C S ELP+R +Y+ IR
Sbjct: 785 GSDGENGTITGKACPRGLYGIFCEECPLGTFKNATGSDRGLCTKCPSYELPNRGIYVSIR 844

Query: 845 GGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMK 904
           GGV + PCPY+C+S+RYHMP CYT LEELVY FGGPWLFGLIL+GLLILLALVLSVARMK
Sbjct: 845 GGVAKRPCPYRCISDRYHMPQCYTALEELVYAFGGPWLFGLILVGLLILLALVLSVARMK 904

Query: 905 YMGGDELPALVPAR---RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPW 961
           Y+GGDELPA VP R   RID+SFPFLESLNEV+ETNRTEES+SHVHRMYFMG N+FSEPW
Sbjct: 905 YVGGDELPATVPVRQSSRIDYSFPFLESLNEVLETNRTEESKSHVHRMYFMGPNSFSEPW 964

Query: 962 HLPHSPPEQVIEIV 975
           HL HSPPEQV EIV
Sbjct: 965 HLSHSPPEQVAEIV 978

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081597|emb|CBI20602.3| unnamed protein product [Vitis vinifera]

 Score = 1125 bits (2909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/951 (68%), Positives = 774/951 (81%), Gaps = 10/951 (1%)

Query: 32  FGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVE 91
           F  D +F+ DY+PP+PPPP   P   S+SC  DL G+G+L+T C L S+L    DD+Y+E
Sbjct: 35  FAVDDIFYQDYSPPAPPPPPPLPP--SVSCSEDLHGIGSLDTTCQLVSNLQL-TDDVYIE 91

Query: 92  GSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNA 151
           G GN +I  GV L C   GC +T+N++G F LG N+ IV G   +SA N+S  +GSVVN 
Sbjct: 92  GKGNFYIGSGVRLDCLASGCSITVNISGNFSLGENASIVTGAFELSAYNSSLHNGSVVNT 151

Query: 152 TGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSY 211
           T L G  P +TSGTP GV GAGGGHGGRGA CLVD  KLP+DVWGGD YSWSSL++P S+
Sbjct: 152 TALAGTAPPQTSGTPQGVDGAGGGHGGRGACCLVDKKKLPEDVWGGDAYSWSSLQKPVSF 211

Query: 212 GSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHR 271
           GSKGGTT K E++GG GGGR+++E+   + V+GS+LADGG  G KGGGGSGGSIY+KA++
Sbjct: 212 GSKGGTTTKEEDYGGHGGGRVKMEIAGFLVVDGSILADGGHGGSKGGGGSGGSIYIKAYK 271

Query: 272 MTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAV 331
           MTG+G+ISA GGNGF GGGGGR+S++VFSRHD  ++ VHGG SFGCPEN+GAAGT+YDAV
Sbjct: 272 MTGSGRISACGGNGFGGGGGGRISVDVFSRHDDPKIFVHGGSSFGCPENSGAAGTFYDAV 331

Query: 332 PRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGA 391
           PR L VSN+N  T+TDTLLLEFP Q LWTNVY+RD+AKA+VPL WSRVQV+GQI L  G 
Sbjct: 332 PRSLIVSNNNRSTDTDTLLLEFPYQPLWTNVYVRDHAKATVPLLWSRVQVQGQISLYCGG 391

Query: 392 VLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILAT 451
           VLSFGLAHYA SEFELLAEELLMSDSI+K+YGALRMSVKM LMWNSK+LID G DA +AT
Sbjct: 392 VLSFGLAHYALSEFELLAEELLMSDSIIKVYGALRMSVKMFLMWNSKLLIDGGGDANVAT 451

Query: 452 SLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSV 511
           SLLEA+NL+VLKESSVI S+ANLGV+GQG LNLSGPGD IEAQRL+LSLF+SI+VGPGSV
Sbjct: 452 SLLEASNLVVLKESSVIHSNANLGVHGQGLLNLSGPGDWIEAQRLVLSLFYSIHVGPGSV 511

Query: 512 LQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIK 571
           L+GP ENA+ +   PRLYC+  DCP ELLHP EDCN+NSSLSFTLQICR E+I ++G+IK
Sbjct: 512 LRGPLENATTDAVTPRLYCELQDCPTELLHPPEDCNVNSSLSFTLQICRVEDITVQGLIK 571

Query: 572 GSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSF 631
           GSVVHFH  RT+ VQ+SG IS S +GCT GVGRGK   +GLG GGGHGGKGG G + GS 
Sbjct: 572 GSVVHFHRARTIAVQSSGKISTSRMGCTGGVGRGKFLSSGLGSGGGHGGKGGDGCYKGSC 631

Query: 632 IDGGATYGDANLPCEL--GSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGE 689
           ++GG +YG+A+LPCEL  GSGSGND L G+ AGGG++VMGSLEH L+SLS+ GS++ADGE
Sbjct: 632 VEGGISYGNADLPCELGSGSGSGNDTLDGSTAGGGVIVMGSLEHPLSSLSIEGSVKADGE 691

Query: 690 SFEEEIHQQDGRLI--STVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGG 747
           S  E        +   S V PGGGSGGTILLF+ +L LGE++ +S+ GG GS  GGGGGG
Sbjct: 692 SSRESTRNNYYSMNNGSNVNPGGGSGGTILLFLRSLALGEAAVLSSIGGHGSLHGGGGGG 751

Query: 748 GGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFC 807
           GGRIHFHWSDIP GD Y P+ASV GSI +RGGL R Q   G NGTVTGKACPRGLYG+FC
Sbjct: 752 GGRIHFHWSDIPTGDVYQPIASVKGSIHSRGGLARDQSGMGENGTVTGKACPRGLYGIFC 811

Query: 808 EECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCY 867
           EECP GT+KNV+GSDR+LCR+C  +ELP RA+YI +RGG+ E PCPYKC+S+RYHMPHCY
Sbjct: 812 EECPAGTYKNVTGSDRSLCRHCPYHELPRRAIYISVRGGIAETPCPYKCISDRYHMPHCY 871

Query: 868 TTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPAR---RIDHSF 924
           T LEEL+YTFGGPWLF L+LLG+LILLALVLSVARMK++G DE P   P +   +IDHSF
Sbjct: 872 TALEELIYTFGGPWLFCLLLLGVLILLALVLSVARMKFVGVDESPGPAPTQHGSQIDHSF 931

Query: 925 PFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV 975
           PFLESLNEV+ETNR EESQSHVHRMYFMG NTFSEPWHLPH+PPEQ+ EIV
Sbjct: 932 PFLESLNEVLETNRAEESQSHVHRMYFMGPNTFSEPWHLPHTPPEQIKEIV 982

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475929|ref|XP_002278525.2| PREDICTED: uncharacterized protein LOC100243932 [Vitis vinifera]

 Score = 1123 bits (2905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/951 (68%), Positives = 774/951 (81%), Gaps = 10/951 (1%)

Query: 32  FGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVE 91
           F  D +F+ DY+PP+PPPP   P   S+SC  DL G+G+L+T C L S+L    DD+Y+E
Sbjct: 35  FAVDDIFYQDYSPPAPPPPPPLPP--SVSCSEDLHGIGSLDTTCQLVSNLQL-TDDVYIE 91

Query: 92  GSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNA 151
           G GN +I  GV L C   GC +T+N++G F LG N+ IV G   +SA N+S  +GSVVN 
Sbjct: 92  GKGNFYIGSGVRLDCLASGCSITVNISGNFSLGENASIVTGAFELSAYNSSLHNGSVVNT 151

Query: 152 TGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSY 211
           T L G  P +TSGTP GV GAGGGHGGRGA CLVD  KLP+DVWGGD YSWSSL++P S+
Sbjct: 152 TALAGTAPPQTSGTPQGVDGAGGGHGGRGACCLVDKKKLPEDVWGGDAYSWSSLQKPVSF 211

Query: 212 GSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHR 271
           GSKGGTT K E++GG GGGR+++E+   + V+GS+LADGG  G KGGGGSGGSIY+KA++
Sbjct: 212 GSKGGTTTKEEDYGGHGGGRVKMEIAGFLVVDGSILADGGHGGSKGGGGSGGSIYIKAYK 271

Query: 272 MTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAV 331
           MTG+G+ISA GGNGF GGGGGR+S++VFSRHD  ++ VHGG SFGCPEN+GAAGT+YDAV
Sbjct: 272 MTGSGRISACGGNGFGGGGGGRISVDVFSRHDDPKIFVHGGSSFGCPENSGAAGTFYDAV 331

Query: 332 PRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGA 391
           PR L VSN+N  T+TDTLLLEFP Q LWTNVY+RD+AKA+VPL WSRVQV+GQI L  G 
Sbjct: 332 PRSLIVSNNNRSTDTDTLLLEFPYQPLWTNVYVRDHAKATVPLLWSRVQVQGQISLYCGG 391

Query: 392 VLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILAT 451
           VLSFGLAHYA SEFELLAEELLMSDSI+K+YGALRMSVKM LMWNSK+LID G DA +AT
Sbjct: 392 VLSFGLAHYALSEFELLAEELLMSDSIIKVYGALRMSVKMFLMWNSKLLIDGGGDANVAT 451

Query: 452 SLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSV 511
           SLLEA+NL+VLKESSVI S+ANLGV+GQG LNLSGPGD IEAQRL+LSLF+SI+VGPGSV
Sbjct: 452 SLLEASNLVVLKESSVIHSNANLGVHGQGLLNLSGPGDWIEAQRLVLSLFYSIHVGPGSV 511

Query: 512 LQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIK 571
           L+GP ENA+ +   PRLYC+  DCP ELLHP EDCN+NSSLSFTLQICR E+I ++G+IK
Sbjct: 512 LRGPLENATTDAVTPRLYCELQDCPTELLHPPEDCNVNSSLSFTLQICRVEDITVQGLIK 571

Query: 572 GSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSF 631
           GSVVHFH  RT+ VQ+SG IS S +GCT GVGRGK   +GLG GGGHGGKGG G + GS 
Sbjct: 572 GSVVHFHRARTIAVQSSGKISTSRMGCTGGVGRGKFLSSGLGSGGGHGGKGGDGCYKGSC 631

Query: 632 IDGGATYGDANLPCEL--GSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGE 689
           ++GG +YG+A+LPCEL  GSGSGND L G+ AGGG++VMGSLEH L+SLS+ GS++ADGE
Sbjct: 632 VEGGISYGNADLPCELGSGSGSGNDTLDGSTAGGGVIVMGSLEHPLSSLSIEGSVKADGE 691

Query: 690 SFEEEIHQQDGRLI--STVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGG 747
           S  E        +   S V PGGGSGGTILLF+ +L LGE++ +S+ GG GS  GGGGGG
Sbjct: 692 SSRESTRNNYYSMNNGSNVNPGGGSGGTILLFLRSLALGEAAVLSSIGGHGSLHGGGGGG 751

Query: 748 GGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFC 807
           GGRIHFHWSDIP GD Y P+ASV GSI +RGGL R Q   G NGTVTGKACPRGLYG+FC
Sbjct: 752 GGRIHFHWSDIPTGDVYQPIASVKGSIHSRGGLARDQSGMGENGTVTGKACPRGLYGIFC 811

Query: 808 EECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCY 867
           EECP GT+KNV+GSDR+LCR+C  +ELP RA+YI +RGG+ E PCPYKC+S+RYHMPHCY
Sbjct: 812 EECPAGTYKNVTGSDRSLCRHCPYHELPRRAIYISVRGGIAETPCPYKCISDRYHMPHCY 871

Query: 868 TTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPAR---RIDHSF 924
           T LEEL+YTFGGPWLF L+LLG+LILLALVLSVARMK++G DE P   P +   +IDHSF
Sbjct: 872 TALEELIYTFGGPWLFCLLLLGVLILLALVLSVARMKFVGVDESPGPAPTQHGSQIDHSF 931

Query: 925 PFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV 975
           PFLESLNEV+ETNR EESQSHVHRMYFMG NTFSEPWHLPH+PPEQ+ EIV
Sbjct: 932 PFLESLNEVLETNRAEESQSHVHRMYFMGPNTFSEPWHLPHTPPEQIKEIV 982

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527738|ref|XP_003532465.1| PREDICTED: uncharacterized protein LOC100797714 [Glycine max]

 Score = 1121 bits (2899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/976 (70%), Positives = 813/976 (83%), Gaps = 11/976 (1%)

Query: 9    TILIFFSLETSLSLDQY--NFPVIGFGA-DSLF---HGDYTPPSPPPPIAPPHPPSLSCQ 62
            T L FFS +  +S  Q+  + P+ GF   DS F   + DYTPPSPPPP   PHPPSL+CQ
Sbjct: 34   TCLFFFSAKFPISSFQFTISLPLSGFSILDSDFDALYADYTPPSPPPPPPLPHPPSLTCQ 93

Query: 63   RDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFL 122
              L G G+L T C LNSSL F +D +Y+EGSG+L+ILPGV L CP+ GC++ INV+ EF 
Sbjct: 94   EGLNGTGSLATTCDLNSSLIFSSD-VYIEGSGSLNILPGVNLSCPVSGCVIFINVSIEFS 152

Query: 123  LGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGAS 182
            L   + IVAGTV V++ NA+   GSV+N TGL G PPA+TSGTP G QGAGGGHGGRGA+
Sbjct: 153  LQSGAAIVAGTVLVASRNATLFGGSVINVTGLAGAPPAQTSGTPSGTQGAGGGHGGRGAT 212

Query: 183  CLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEV 242
            C+ DN KLPDDVWGGD YSWSSL+EPWSYGSKGGTT K E +GG+GGGRI+ EV++ I+V
Sbjct: 213  CVSDNTKLPDDVWGGDAYSWSSLDEPWSYGSKGGTTSKEEKYGGEGGGRIKFEVLDSIDV 272

Query: 243  NGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRH 302
            +G LLA+GGD G+KGGGGSGGSI+VKAHRMTG G ISA+G  GFAGGGGGRVSINVFSRH
Sbjct: 273  SGDLLANGGDGGMKGGGGSGGSIFVKAHRMTGTGTISATGAGGFAGGGGGRVSINVFSRH 332

Query: 303  DGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNV 362
            D  +  +HGG S GC  NAGAAGTYYDAVPR L + N NL T TDTLLLEFPK  LWTNV
Sbjct: 333  DSTKFFIHGGISLGCSGNAGAAGTYYDAVPRSLTICNHNLSTQTDTLLLEFPKVPLWTNV 392

Query: 363  YIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIY 422
            Y+++ AKA  PL+WSRVQV G I L+ GA LSFGLAHY +SEFEL+AEELLMSDS+VKIY
Sbjct: 393  YVQNQAKALFPLYWSRVQVGGLIRLTFGAALSFGLAHYGSSEFELMAEELLMSDSVVKIY 452

Query: 423  GALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFL 482
            GALRMSVK+HLM NSKMLIDA  D I+ATSLLEA+NL+VLK+SSVI S+ANLGV+GQGFL
Sbjct: 453  GALRMSVKIHLMLNSKMLIDANGDRIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGFL 512

Query: 483  NLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHP 542
            NLSG G++IEAQ LILSLF+SINVGPGSVL+GP E AS +D  P+LYC+  +CPVELLHP
Sbjct: 513  NLSGAGNLIEAQHLILSLFYSINVGPGSVLRGPLE-ASGDDMTPQLYCEVENCPVELLHP 571

Query: 543  LEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGV 602
             EDCN+NSSL+FTLQICR E++ +EG I GSVVHFH +R + V  SG IS SGLGCT G+
Sbjct: 572  PEDCNVNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYSGVISVSGLGCTGGL 631

Query: 603  GRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAG 662
            GR + F+NG+GGGGGHGG GG GY+NG+FI+GG+TYGD +LPCELGSGSGN++LAGA AG
Sbjct: 632  GRARYFENGIGGGGGHGGYGGDGYYNGNFIEGGSTYGDVDLPCELGSGSGNNSLAGATAG 691

Query: 663  GGIVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHT 722
            GGI+VMGSLEHSL+SL++ GS+RADGESF ++   +DG + S++GPGGGSGGT+LLFI T
Sbjct: 692  GGIIVMGSLEHSLSSLTLNGSLRADGESFGDDPRGKDGGITSSIGPGGGSGGTVLLFIQT 751

Query: 723  LVLGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGR 782
            L LG+SS IST GG+GS SGGGGGGGGR+H HWS+IP+GDEY+PLASV GSI   GG G 
Sbjct: 752  LALGDSSIISTAGGQGSPSGGGGGGGGRVHLHWSNIPVGDEYVPLASVKGSIITGGGFGG 811

Query: 783  GQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIP 842
            GQGL G NG+++G ACPRGLYG+FCEECPVGT+KNVSGSDRALC +C S++LPHRA+YI 
Sbjct: 812  GQGLPGKNGSISGTACPRGLYGIFCEECPVGTYKNVSGSDRALCHDCPSDKLPHRAIYIS 871

Query: 843  IRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVAR 902
            +RGGV E PCPYKC+S+RYHMP+C+T  EELVYTFGGPWLFGL+LLGLL+LLALVLSVAR
Sbjct: 872  VRGGVAETPCPYKCISDRYHMPNCHTAFEELVYTFGGPWLFGLLLLGLLVLLALVLSVAR 931

Query: 903  MKYMGGDELPALVPAR---RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSE 959
            MKY+ GD+LPA+ PAR   R++HSFPFLESLNE+METNR+EES SHVHR+YF G NTFSE
Sbjct: 932  MKYVAGDDLPAVTPARNDTRLNHSFPFLESLNEIMETNRSEESPSHVHRLYFQGPNTFSE 991

Query: 960  PWHLPHSPPEQVIEIV 975
            PWHLPH PPEQV +IV
Sbjct: 992  PWHLPHCPPEQVKDIV 1007

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511399|ref|XP_003524414.1| PREDICTED: uncharacterized protein LOC100796396 [Glycine max]

 Score = 1108 bits (2867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/969 (70%), Positives = 809/969 (83%), Gaps = 6/969 (0%)

Query: 10  ILIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVG 69
           +L++F+   +     + F ++    D+L+ GDYTPPSPPPP   PHPPSL+C   L G G
Sbjct: 13  LLLYFTFSFASQHSHHGFSILDSDFDALY-GDYTPPSPPPPPPLPHPPSLTCLEGLNGTG 71

Query: 70  TLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEI 129
           +L T C LNSSL F N D+Y+EG+G+L+ILPGV L CP+ GC++ INV+ EF L   + I
Sbjct: 72  SLTTTCDLNSSLIF-NSDVYIEGNGSLNILPGVNLSCPVSGCVILINVSNEFSLQSGAAI 130

Query: 130 VAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMK 189
           VAGTV V++ NA+   GSV+N TGL G PPA+TSGTP G QGAGGGHGGRGA+C+ DN K
Sbjct: 131 VAGTVLVASRNATLFGGSVINVTGLAGAPPAQTSGTPSGTQGAGGGHGGRGATCVSDNTK 190

Query: 190 LPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLAD 249
           LPDDVWGGD YSWSSL+EPWSYGSKGGTT K E +GG+GGGRI+  VV+ I+V+G LLA+
Sbjct: 191 LPDDVWGGDAYSWSSLDEPWSYGSKGGTTSKEEKYGGEGGGRIKFAVVDSIDVSGDLLAN 250

Query: 250 GGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCV 309
           GGD G+KGGGGSGGSIYVKAHR+TG G ISA+GG GFAGGGGGRVSINVFSRHD  +  +
Sbjct: 251 GGDGGMKGGGGSGGSIYVKAHRITGTGTISATGGGGFAGGGGGRVSINVFSRHDNTKFFI 310

Query: 310 HGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAK 369
           HGG S GC  NAGAAGTYYDAVPR L + N NL T TDTLLLEFPK  LWTNVY+++ AK
Sbjct: 311 HGGISLGCSRNAGAAGTYYDAVPRSLTICNHNLSTQTDTLLLEFPKVPLWTNVYVQNQAK 370

Query: 370 ASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSV 429
           A  PL+WSRVQV G I L+ GAVLSFGLAHY +SEFEL+AEELLMSDS+VKIYGALRMSV
Sbjct: 371 ALFPLYWSRVQVGGLIRLTYGAVLSFGLAHYGSSEFELMAEELLMSDSVVKIYGALRMSV 430

Query: 430 KMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGD 489
           K+HLM NSKMLIDA  D I+ATSLLEA+NL+VLK+SSVI S+ANLGV+GQG LNLSG G+
Sbjct: 431 KIHLMLNSKMLIDANGDQIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGSLNLSGAGN 490

Query: 490 MIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLN 549
           +IEAQ LILSLFFSINVGPGSVL+GP E AS +D  P+LYC+  +CPVELLHP EDCN+N
Sbjct: 491 LIEAQHLILSLFFSINVGPGSVLRGPLE-ASGDDMTPQLYCEVENCPVELLHPPEDCNVN 549

Query: 550 SSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFD 609
           SSL+FTLQICR E++ +EG I GSVVHFH +R + V  SG IS SGLGCT G+GR + F+
Sbjct: 550 SSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYSGVISVSGLGCTGGLGRARYFE 609

Query: 610 NGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMG 669
           NG+GGGGGHGG GG GY+NG+FI+GG+TYGD +LPCELGSGSGN++LAGA AGGGI+VMG
Sbjct: 610 NGIGGGGGHGGYGGDGYYNGNFIEGGSTYGDVDLPCELGSGSGNNSLAGATAGGGIIVMG 669

Query: 670 SLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVGPGGGSGGTILLFIHTLVLGESS 729
           SLEHSL+SL++ GS+RADGESF ++   +DG + S++GPGGGSGGT+LLFI TL LG+SS
Sbjct: 670 SLEHSLSSLTLNGSLRADGESFGDDPRGKDGGITSSIGPGGGSGGTVLLFIQTLALGDSS 729

Query: 730 SISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGG 789
            IST GG+GS SGGGGGGGGR+HFHWS+IP+GDEY+PLASV GSI   GG G GQGL G 
Sbjct: 730 IISTAGGQGSPSGGGGGGGGRVHFHWSNIPVGDEYVPLASVKGSIITGGGFGGGQGLPGK 789

Query: 790 NGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTE 849
           NG+++G ACPRGLYG+FCEECPVGT+K+VSGSDRALC +C  +ELPHRA+YI +RGGV E
Sbjct: 790 NGSISGTACPRGLYGIFCEECPVGTYKDVSGSDRALCHDCPPDELPHRAIYISVRGGVAE 849

Query: 850 CPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGD 909
            PCPYKC+S+RYHMP+CYT  EELVYTFGGPWLFGL+LLGLLILLALVLSVARMKY+ GD
Sbjct: 850 TPCPYKCISDRYHMPNCYTAFEELVYTFGGPWLFGLLLLGLLILLALVLSVARMKYVAGD 909

Query: 910 ELPALVPAR---RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHS 966
           +LPA+ PAR   R++HSFPFLESLNE+METNR+EESQSHVHR+YF G NTFSEPWHL H 
Sbjct: 910 DLPAVTPARNDTRLNHSFPFLESLNEIMETNRSEESQSHVHRLYFHGPNTFSEPWHLLHC 969

Query: 967 PPEQVIEIV 975
           PPEQV +IV
Sbjct: 970 PPEQVKDIV 978

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088972|ref|XP_002308587.1| predicted protein [Populus trichocarpa] gi|222854563|gb|EEE92110.1| predicted protein [Populus trichocarpa]

 Score = 1091 bits (2822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/992 (65%), Positives = 780/992 (78%), Gaps = 23/992 (2%)

Query: 1   MAQIFLIFTI-------------LIFFSLETSLSLDQYNFPVIGFGADSLFHGDYTPPSP 47
           MA+   IFT              L      +    +  +F VI F ++ LFH DY+   P
Sbjct: 1   MARFQFIFTFIPILITIITLTTNLRVLCSGSDSDSESGSFSVIDFDSNLLFHQDYS--PP 58

Query: 48  PPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCP 107
            PP  PPHPPS SC  DLGG+G+++TVC + + +     D+Y+EG G+ +I PGV   CP
Sbjct: 59  APPPPPPHPPSASCTDDLGGIGSIDTVCQIVADVNLTR-DVYIEGKGDFNIHPGVRFHCP 117

Query: 108 IKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPD 167
             GC +TINV+G F L  NS IV GT  + A NASF +GSVVN TGL G+PP +TSGTP 
Sbjct: 118 NFGCSITINVSGNFNLSVNSSIVTGTFELVANNASFFNGSVVNTTGLAGDPPPQTSGTPQ 177

Query: 168 GVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFGGD 227
           G++GAGGGHGGRGA CLVD  KLP+D+WGGD YSWSSL++PWSYGSKGG+T K  ++GG 
Sbjct: 178 GLEGAGGGHGGRGACCLVDKEKLPEDIWGGDAYSWSSLQDPWSYGSKGGSTSKEVDYGGA 237

Query: 228 GGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGNGKISASGGNGFA 287
           GGGR++++V   + V+G++LADGG  GVKGGGGSGGSI +KA++MTG G+ISA GGNGFA
Sbjct: 238 GGGRVKMKVKEYLAVDGAILADGGYGGVKGGGGSGGSILLKAYKMTGGGRISACGGNGFA 297

Query: 288 GGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSNDNLPTNTD 347
           GGGGGRVS+++FSRHD  ++ VHGG SFGCPENAG AGT YDAV R L VSN N+ T+TD
Sbjct: 298 GGGGGRVSVDIFSRHDDPQIFVHGGNSFGCPENAGGAGTLYDAVARSLTVSNHNMSTDTD 357

Query: 348 TLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFEL 407
           TL+LEFP Q LWTNVY+R++A+A+VPL WSRVQV+GQI L    VLSFGLAHYA+SEFEL
Sbjct: 358 TLILEFPYQPLWTNVYVRNHARATVPLLWSRVQVQGQISLLCSGVLSFGLAHYASSEFEL 417

Query: 408 LAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSV 467
            AEELLMSDS   +YGALRMSVKM LMWNSKM+ID G+D  +ATSLLEA+NL+VLKESSV
Sbjct: 418 FAEELLMSDS---VYGALRMSVKMFLMWNSKMIIDGGEDVTVATSLLEASNLVVLKESSV 474

Query: 468 IRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPR 527
           I S+ANLGV+GQG LNLSG G+ IEAQRL+LSLF+SI+V PGSVL+GP ENA+++   PR
Sbjct: 475 IHSNANLGVHGQGLLNLSGSGNWIEAQRLVLSLFYSIHVAPGSVLRGPVENATSDAITPR 534

Query: 528 LYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVVHFHLVRTVVVQA 587
           L+C   +CP EL HP EDCN+NSSLSFTLQICR E+I +EG+I+GSVVHF+  R + V +
Sbjct: 535 LHCQLEECPAELFHPPEDCNVNSSLSFTLQICRVEDITVEGLIEGSVVHFNQARAISVPS 594

Query: 588 SGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGGATYGDANLPCEL 647
           SG ISASG+GCT GVGRG    NG+G GGGHGGKGG   +N + +DGG +YGDA LPCEL
Sbjct: 595 SGTISASGMGCTGGVGRGNGLSNGIGSGGGHGGKGGSACYNDNCVDGGVSYGDAELPCEL 654

Query: 648 GSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRL-ISTV 706
           GSGSG +N +G+ AGGGI+VMGSLEH L+SLSV GS+R DGESF+     Q   +  +  
Sbjct: 655 GSGSGQENSSGSTAGGGIIVMGSLEHPLSSLSVEGSVRVDGESFKGITRDQLVVMKGTAG 714

Query: 707 GPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHFHWSDIPIGDEYLP 766
           GPGGGSGGTILLF+HTL LGE + +S+ GG GS  GGGGGGGGR+HFHWSDIP GD Y P
Sbjct: 715 GPGGGSGGTILLFLHTLDLGEHAVLSSVGGYGSPKGGGGGGGGRVHFHWSDIPTGDMYQP 774

Query: 767 LASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALC 826
           +A VNGSI   GGLGR  G AG NGTVTGKACP+GLYG+FCEECPVGT+KNV+GS R LC
Sbjct: 775 IARVNGSIHTWGGLGRDDGHAGENGTVTGKACPKGLYGIFCEECPVGTYKNVTGSSRVLC 834

Query: 827 RNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWLFGLI 886
            +C +++LP RA YI +RGG+ E PCPYKCVSER+HMPHCYT LEEL+YTFGGPWLF L+
Sbjct: 835 HSCPADDLPRRAAYIAVRGGIAETPCPYKCVSERFHMPHCYTALEELIYTFGGPWLFCLL 894

Query: 887 LLGLLILLALVLSVARMKYMGGDELPALVPAR---RIDHSFPFLESLNEVMETNRTEESQ 943
           LLGLLILLALVLSVARMK++G DELP   P +   +IDHSFPFLESLNEV+ETNR EESQ
Sbjct: 895 LLGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESQ 954

Query: 944 SHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV 975
           SHVHRMYFMG+NTFSEPWHLPH+PPEQ+ EIV
Sbjct: 955 SHVHRMYFMGRNTFSEPWHLPHTPPEQIKEIV 986

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550884|ref|XP_002516490.1| conserved hypothetical protein [Ricinus communis] gi|223544310|gb|EEF45831.1| conserved hypothetical protein [Ricinus communis]

 Score = 1085 bits (2805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/957 (67%), Positives = 786/957 (82%), Gaps = 13/957 (1%)

Query: 26  NFPVIGFGADSLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFEN 85
           +F +I + ++ LFH DY+PPSPPPP       S+SC  DLGG+G+L+T C + S++    
Sbjct: 38  SFSIIDYDSN-LFHQDYSPPSPPPPPPHAP--SVSCTDDLGGIGSLDTTCRIISNVNLTR 94

Query: 86  DDIYVEGSGNLHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSS 145
           D +Y+ G GN +I PGV+  C   GC +TIN+TG F L  N+ IV  +  + A NASFS+
Sbjct: 95  D-VYIAGKGNFYIHPGVSFNCLSFGCSVTINITGNFTLSINASIVTSSFELVAYNASFSN 153

Query: 146 GSVVNATGLGGEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSL 205
            SVVN TGL G PP +TSGTP G+ GAGGGHGGRGA CLVD+ KLP+DVWGGD YSWSSL
Sbjct: 154 NSVVNTTGLAGNPPPQTSGTPQGIDGAGGGHGGRGACCLVDDKKLPEDVWGGDAYSWSSL 213

Query: 206 EEPWSYGSKGGTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSI 265
           + P SYGS+GG+T K  N+GG GGG+++  +   + V+G +LADGGD G KGGGGSGGSI
Sbjct: 214 QIPNSYGSRGGSTSKEVNYGGGGGGKVKFTISEYLVVDGGILADGGDGGSKGGGGSGGSI 273

Query: 266 YVKAHRMTGNGKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAG 325
           ++KA++MTG+G+ISA GG+GFAGGGGGRVS+++FSRHD  ++ VHGG SFGCPENAGAAG
Sbjct: 274 FIKAYKMTGSGRISACGGSGFAGGGGGRVSVDIFSRHDDPQIFVHGGSSFGCPENAGAAG 333

Query: 326 TYYDAVPRRLFVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQI 385
           T YDAVPR L VSN N+ T+T+TLLL+FP Q LWTNVY+R++A+A+VPL WSRVQV+GQI
Sbjct: 334 TLYDAVPRSLIVSNHNMSTDTETLLLDFPYQPLWTNVYVRNHARATVPLLWSRVQVQGQI 393

Query: 386 HLSQGAVLSFGLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGD 445
            L    VLSFGLAHYA+SEFELLAEELLMSDS++K+YGALRM+VK+ LMWNSKM++D G+
Sbjct: 394 SLLCHGVLSFGLAHYASSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSKMIVDGGE 453

Query: 446 DAILATSLLEATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSIN 505
           D  + TS LEA+NL+VLKESSVI+S+ANLGV+GQG LNLSGPGD IEAQRL+LSLF+SI+
Sbjct: 454 DTTVTTSWLEASNLIVLKESSVIQSNANLGVHGQGLLNLSGPGDSIEAQRLVLSLFYSIH 513

Query: 506 VGPGSVLQGPSENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEIN 565
           VGPGSVL+GP +NA+++   PRLYC+  DCP+ELLHP EDCN+NSSLSFTLQICR E+I 
Sbjct: 514 VGPGSVLRGPLQNATSDAVTPRLYCELQDCPIELLHPPEDCNVNSSLSFTLQICRVEDIT 573

Query: 566 IEGIIKGSVVHFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQG 625
           +EG+IKGSVVHFH  RTV V +SG ISASG+GCT GVGRG V +NG+G GGGHGGKGG G
Sbjct: 574 VEGLIKGSVVHFHRARTVSVLSSGRISASGMGCTGGVGRGHVLENGIGSGGGHGGKGGLG 633

Query: 626 YFNGSFIDGGATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIR 685
            +NGS I+GG +YG+  LPCELGSGSG+++ AG+ AGGGI+VMGSL+H L+SLSV GS+R
Sbjct: 634 CYNGSCIEGGMSYGNVELPCELGSGSGDESSAGSTAGGGIIVMGSLDHPLSSLSVEGSVR 693

Query: 686 ADGESFEEEIHQQDGRLI----STVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHS 741
           ADGESF++ +  + G+L     +T GPGGGSGGTIL+F+HTL L ES+ +S+ GG GS +
Sbjct: 694 ADGESFQQTV--KLGKLTVKNDTTGGPGGGSGGTILMFLHTLDLSESAVLSSGGGYGSQN 751

Query: 742 GGGGGGGGRIHFHWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRG 801
           G GGGGGGRIHFHWSDIP GD Y P+ASV GSI   GG GR +G AG NGTVTGKACP+G
Sbjct: 752 GAGGGGGGRIHFHWSDIPTGDVYQPIASVKGSILFGGGTGRDEGCAGENGTVTGKACPKG 811

Query: 802 LYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERY 861
           L+GVFCEECP GTFKNV+GS+R+LC  C +NELPHRA+Y+ +RGG+ E PCPYKC+S+R+
Sbjct: 812 LFGVFCEECPAGTFKNVTGSERSLCHPCPANELPHRAVYVAVRGGIAETPCPYKCISDRF 871

Query: 862 HMPHCYTTLEELVYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPAR--- 918
           HMPHCYT LEEL+YTFGGPWLF L+L+ LLILLALVLSVARMK++G DELP   P +   
Sbjct: 872 HMPHCYTALEELIYTFGGPWLFCLLLVALLILLALVLSVARMKFVGVDELPGPAPTQHGS 931

Query: 919 RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV 975
           +IDHSFPFLESLNEV+ETNR EESQ+HVHRMYFMG NTFSEPWHLPH+PPEQ+ EIV
Sbjct: 932 QIDHSFPFLESLNEVLETNRAEESQNHVHRMYFMGPNTFSEPWHLPHTPPEQIKEIV 988

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515645|ref|XP_003526509.1| PREDICTED: uncharacterized protein LOC100804207 [Glycine max]

 Score = 1077 bits (2786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/945 (67%), Positives = 767/945 (81%), Gaps = 8/945 (0%)

Query: 36  SLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGN 95
           +LFH DY+PP+PPPP   P   S+SC  DLGGVGTL+T C + + +    D +Y+ G GN
Sbjct: 41  NLFHQDYSPPAPPPPPPHPP--SVSCVDDLGGVGTLDTTCKIVNDVNLTRD-VYIAGKGN 97

Query: 96  LHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLG 155
            +ILPGV   C I GC++T+NVTG F LG NS IV G     A NA F + SVVN TG+ 
Sbjct: 98  FNILPGVRFHCEIPGCMVTVNVTGNFSLGSNSSIVTGAFEFEAENAVFGNESVVNTTGMA 157

Query: 156 GEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKG 215
           G+PP +TSGTP GV+G GGGHGGRGASCLVD  KLP+DVWGGD YSW+SL++P+S+GS+G
Sbjct: 158 GDPPPQTSGTPQGVEGGGGGHGGRGASCLVDTTKLPEDVWGGDAYSWASLQKPYSFGSRG 217

Query: 216 GTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGN 275
           G+T K  ++GG GGG +R+ V   +E+N ++LADG D G KGGGGSGGSIY+KA+RMTGN
Sbjct: 218 GSTSKESDYGGLGGGLVRMVVHQIVEMNATVLADGADGGTKGGGGSGGSIYIKAYRMTGN 277

Query: 276 GKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRL 335
           G ISA GGNGFAGGGGGRVS++VFSRHD  ++ VHGG+S GCPENAGAAGT YDAVPR L
Sbjct: 278 GIISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHGGKSLGCPENAGAAGTLYDAVPRSL 337

Query: 336 FVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSF 395
            V N N+ T+T+TLLLEFP Q LWTNVY+R+ A+A+VPL WSRVQV+GQI + QG VLSF
Sbjct: 338 IVDNYNMTTDTETLLLEFPNQPLWTNVYVRNKARATVPLLWSRVQVQGQISILQGGVLSF 397

Query: 396 GLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLE 455
           GL HYATSEFELLAEELLMSDS++K+YGALRMSVKM LMWNSKMLID G+D  +ATSLLE
Sbjct: 398 GLRHYATSEFELLAEELLMSDSVMKVYGALRMSVKMFLMWNSKMLIDGGEDVTVATSLLE 457

Query: 456 ATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGP 515
           A+NL+VL+ +SVI S+ANLGV+GQG LNLSGPGD IEAQRL+LSLF+SI+VGPGSVL+GP
Sbjct: 458 ASNLIVLRGASVIHSNANLGVHGQGLLNLSGPGDWIEAQRLVLSLFYSIHVGPGSVLRGP 517

Query: 516 SENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVV 575
            ENA+ +D  P+LYC+  DCP ELLHP EDCN+NSSLSFTLQICR E+I +EG+IKGSVV
Sbjct: 518 LENATTDDVTPKLYCNNEDCPYELLHPPEDCNVNSSLSFTLQICRVEDILVEGLIKGSVV 577

Query: 576 HFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGG 635
           HFH  RT+ V++SG ISASG+GCT G+GRG    NG+G GGGHGG GG  ++N + ++GG
Sbjct: 578 HFHRARTISVESSGTISASGMGCTGGLGRGNTLTNGIGSGGGHGGTGGDAFYNDNHVEGG 637

Query: 636 ATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEI 695
            +YG+A LPCELGSGSG  N  G+ AGGGI+V+GSLEH L+SLS+ GS+ ADG +FE +I
Sbjct: 638 RSYGNATLPCELGSGSGIGNSTGSTAGGGIIVVGSLEHPLSSLSIQGSVNADGGNFEPQI 697

Query: 696 HQQDGRLIS--TVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHF 753
             +   +    T GPGGGSGGTIL+F+H L +G+S+ +S+ GG  S +G GGGGGGRIHF
Sbjct: 698 RNEKFAIFDNFTGGPGGGSGGTILMFLHMLNIGQSAVLSSMGGYSSSNGSGGGGGGRIHF 757

Query: 754 HWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVG 813
           HWSDIP GD YLP+ASV G I   GG G+GQG +G NGT+TGKACP+GLYG FCEECP G
Sbjct: 758 HWSDIPTGDVYLPIASVEGDIQIWGGKGKGQGGSGANGTITGKACPKGLYGTFCEECPAG 817

Query: 814 TFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEEL 873
           T+KNV+GSD++LC +C  NELPHRA+YI +RGG+TE PCPY+C S+RY MP CYT LEEL
Sbjct: 818 TYKNVTGSDKSLCHSCPVNELPHRAVYISVRGGITETPCPYQCASDRYLMPDCYTALEEL 877

Query: 874 VYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPAR---RIDHSFPFLESL 930
           +YTFGGPWLFGL L+GLLILLALVLSVARMK++G DELP   P +   +IDHSFPFLESL
Sbjct: 878 IYTFGGPWLFGLFLIGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESL 937

Query: 931 NEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV 975
           NEV+ETNR EESQSHVHRMYFMG NTFSEPWHLPH+P EQ+ ++V
Sbjct: 938 NEVLETNRVEESQSHVHRMYFMGPNTFSEPWHLPHTPSEQIKDVV 982

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510059|ref|XP_003523758.1| PREDICTED: uncharacterized protein LOC100783686 [Glycine max]

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/945 (67%), Positives = 766/945 (81%), Gaps = 8/945 (0%)

Query: 36  SLFHGDYTPPSPPPPIAPPHPPSLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGN 95
           +LFH DY+PP+PPPP   P   S+SC  DLGGVGTL+T C + + +    D +Y+ G GN
Sbjct: 40  NLFHQDYSPPAPPPPPPHPP--SVSCVDDLGGVGTLDTTCKIVNDVNLTRD-VYIAGKGN 96

Query: 96  LHILPGVTLCCPIKGCLLTINVTGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLG 155
            +ILPGV   C I GC++T+NVTG F LG NS IV G     + NA F + SVVN TG+ 
Sbjct: 97  FNILPGVRFLCEIPGCMVTVNVTGNFSLGSNSSIVTGAFEFESENAVFGNESVVNTTGMA 156

Query: 156 GEPPAETSGTPDGVQGAGGGHGGRGASCLVDNMKLPDDVWGGDPYSWSSLEEPWSYGSKG 215
           G+PP +TSGTP GV+G GGGHGGRGASCLVD  KLP+DVWGGD YSW+SL+ P+S+GS+G
Sbjct: 157 GDPPPQTSGTPQGVEGGGGGHGGRGASCLVDTTKLPEDVWGGDAYSWASLQNPYSFGSRG 216

Query: 216 GTTFKGENFGGDGGGRIRLEVVNEIEVNGSLLADGGDVGVKGGGGSGGSIYVKAHRMTGN 275
           G+T K  ++GG GGG +R+ V   +E+N ++LADGGD G KGGGGSGGSIY+KA+RMTGN
Sbjct: 217 GSTSKESDYGGLGGGLVRMVVHQIVEMNATVLADGGDGGTKGGGGSGGSIYIKAYRMTGN 276

Query: 276 GKISASGGNGFAGGGGGRVSINVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRL 335
           G ISA GGNGFAGGGGGRVS++VFSRHD  ++ VHGG+S GCPENAGAAGT YDAVPR L
Sbjct: 277 GIISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHGGKSLGCPENAGAAGTLYDAVPRSL 336

Query: 336 FVSNDNLPTNTDTLLLEFPKQQLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSF 395
            V N N+ T+T+TLLLEFP Q LWTNVY+R+ A+A+VPL WSRVQV+GQI + QG VLSF
Sbjct: 337 IVDNFNMTTDTETLLLEFPNQPLWTNVYVRNKARATVPLLWSRVQVQGQISILQGGVLSF 396

Query: 396 GLAHYATSEFELLAEELLMSDSIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLE 455
           GL HYATSEFELLAEELLMSDS++K+YGALRMSVKM LMWNSKMLID G+D  +ATSLLE
Sbjct: 397 GLRHYATSEFELLAEELLMSDSVMKVYGALRMSVKMFLMWNSKMLIDGGEDITVATSLLE 456

Query: 456 ATNLMVLKESSVIRSDANLGVNGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGP 515
           A+NL+VL+ +SVI S+ANLGV+GQG LNLSGPGD IEAQRL+LSLF+SI+VGPGSVL+GP
Sbjct: 457 ASNLIVLRGASVIHSNANLGVHGQGLLNLSGPGDWIEAQRLVLSLFYSIHVGPGSVLRGP 516

Query: 516 SENASNNDTKPRLYCDRHDCPVELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSVV 575
            ENA+ +D  P+LYCD+ DCP ELLHP EDCN+NSSLSFTLQICR E+I +EG+IKGSVV
Sbjct: 517 LENATTDDVTPKLYCDKEDCPYELLHPPEDCNVNSSLSFTLQICRVEDILVEGLIKGSVV 576

Query: 576 HFHLVRTVVVQASGAISASGLGCTHGVGRGKVFDNGLGGGGGHGGKGGQGYFNGSFIDGG 635
           HFH  RT+ V++SG ISASG+GCT G+G G    NG+G GGGHGG GG+ ++N + + GG
Sbjct: 577 HFHRARTISVESSGTISASGMGCTGGLGHGNTLSNGIGSGGGHGGTGGEAFYNDNHVKGG 636

Query: 636 ATYGDANLPCELGSGSGNDNLAGAIAGGGIVVMGSLEHSLTSLSVYGSIRADGESFEEEI 695
            +YG A LPCELGSGSGN N  G  AGGGI+V+GSLEH L+SLS+ G ++A+G +FE +I
Sbjct: 637 CSYGSATLPCELGSGSGNGNSTGTTAGGGIIVVGSLEHPLSSLSIQGYVKANGGNFEPQI 696

Query: 696 HQQDGRLIS--TVGPGGGSGGTILLFIHTLVLGESSSISTTGGRGSHSGGGGGGGGRIHF 753
             +   +    T GPGGGSGGTIL+F+H L +G+S+ +S+ GG  S +G GGGGGGRIHF
Sbjct: 697 RNEKFAIFDNFTGGPGGGSGGTILMFLHMLTIGKSAVLSSMGGYSSSNGSGGGGGGRIHF 756

Query: 754 HWSDIPIGDEYLPLASVNGSIDARGGLGRGQGLAGGNGTVTGKACPRGLYGVFCEECPVG 813
           HWSDIP GD YLP+ASV G I   GG G+GQG +G NGT+TGKACP+GLYG FCEECP G
Sbjct: 757 HWSDIPTGDVYLPIASVKGDIQIWGGKGKGQGGSGANGTITGKACPKGLYGTFCEECPAG 816

Query: 814 TFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEEL 873
           T+KNV+GSD++LC +C  NELPHRA YI +RGG+TE PCPY+CVS+RYHMP CYT LEEL
Sbjct: 817 TYKNVTGSDKSLCHSCPVNELPHRAAYISVRGGITETPCPYQCVSDRYHMPDCYTALEEL 876

Query: 874 VYTFGGPWLFGLILLGLLILLALVLSVARMKYMGGDELPALVPAR---RIDHSFPFLESL 930
           +Y FGGPWLFGL L+GLLILLALVLSVARMK++G DELP   P +   +IDHSFPFLESL
Sbjct: 877 IYRFGGPWLFGLFLMGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESL 936

Query: 931 NEVMETNRTEESQSHVHRMYFMGQNTFSEPWHLPHSPPEQVIEIV 975
           NEV+ETNR EESQSHVHRMYFMG NTFSEPWHLPH+P EQ+ ++V
Sbjct: 937 NEVLETNRVEESQSHVHRMYFMGPNTFSEPWHLPHTPSEQIKDVV 981

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	975
TAIR|locus:2123762	1432	AT4G32920 "AT4G32920" [Arabido	0.937	0.638	0.498	2.5e-246

TAIR|locus:2123762 AT4G32920 "AT4G32920" [Arabidopsis thaliana (taxid:3702)]

 Score = 2373 (840.4 bits), Expect = 2.5e-246, P = 2.5e-246
 Identities = 460/922 (49%), Positives = 586/922 (63%)

Query:    58 SLSCQRDLGGVGTLETVCLLNSSLTFENDDIYVEGSGNLHILPGVTLCCPIKGCLLTINV 117
             S+SC  DLGGVG+L++ C L + L    D + + G GNLH+LPGV L C   GC +++N+
Sbjct:    57 SVSCVDDLGGVGSLDSTCKLVADLNLTRD-LNITGKGNLHVLPGVRLVCQFPGCSISVNI 115

Query:   118 TGEFLLGRNSEIVAGTVYVSALNASFSSGSVVNATGLGGEPPAETSGTPDXXXXXXXXXX 177
             +G F L  NS ++AGT  ++A NA F   S V+ TGL GEPP +TSGTP+          
Sbjct:   116 SGNFSLAENSSVIAGTFRLAAENAEFGLSSAVDTTGLAGEPPPDTSGTPEGVEGAGGGYG 175

Query:   178 XXXASCLVDNM-KLPDDVWGGDPYSWSSLEEPWSYGSKGGTTFKGENFXXXXXXRIRLEV 236
                A CL D   K+P+DV+GGD Y WSSLE+P  YGS+GG+T    ++       + +E+
Sbjct:   176 GRGACCLSDTTTKIPEDVFGGDVYGWSSLEKPEIYGSRGGSTSNEVDYGGGGGGTVAIEI 235

Query:   237 VNEIEVNGSLLAXXXXXXXXXXXXXXXXIYVKAHRMTGNGKISASXXXXXXXXXXXRVSI 296
             +  I +NGS+LA                I+V AH+M GNG++SAS           RVS+
Sbjct:   236 LGYISLNGSVLADGASGGVKGGGGSGGSIFVMAHKMAGNGRLSASGGDGYAGGGGGRVSV 295

Query:   297 NVFSRHDGAEVCVHGGRSFGCPENAGAAGTYYDAVPRRLFVSXXXXXXXXXXXXXEFPKQ 356
             +++SRH   ++  +GGRSFGCPENAGAAGT YD +   L +              EFP  
Sbjct:   296 DIYSRHSDPKIFFNGGRSFGCPENAGAAGTLYDVISESLTIDNHNKTTYTDTLLLEFPNH 355

Query:   357 QLWTNVYIRDNAKASVPLFWSRVQVRGQIHLSQGAVLSFGLAHYATSEFELLAEELLMSD 416
             +L+TN+YIR+ AK +VPL WSRVQV+G I LS G  L+FGL  YA+SEFEL AEELLMS+
Sbjct:   356 RLFTNLYIRNMAKVAVPLRWSRVQVQGLISLSNGGELNFGLPRYASSEFELFAEELLMSN 415

Query:   417 SIVKIYGALRMSVKMHLMWNSKMLIDAGDDAILATSLLEATNLMVLKESSVIRSDANLGV 476
             S +K+YGALRM+VK+ LM  S+M ID G   IL TS+LE +NL+VLKESSVI+S+ NLGV
Sbjct:   416 SAIKVYGALRMTVKVFLMLKSRMFIDGGGVTILGTSMLEISNLLVLKESSVIQSNGNLGV 475

Query:   477 NGQGFLNLSGPGDMIEAQRLILSLFFSINVGPGSVLQGPSENASNNDTKPRLYCDRHDCP 536
             +GQG LNL+G GD IEAQRLILSLF+SI VG G+VL+GP +NAS     P+LYC R DCP
Sbjct:   476 HGQGLLNLTGTGDTIEAQRLILSLFYSIQVGAGAVLRGPLQNASTGGLTPKLYCQRQDCP 535

Query:   537 VELLHPLEDCNLNSSLSFTLQICRAEEINIEGIIKGSXXXXXXXXXXXXQASGAISASGL 596
             VELLHP EDCN+NSSL FTLQICR E+I +EG+IKGS            ++SG ISA G+
Sbjct:   536 VELLHPPEDCNVNSSLPFTLQICRVEDITVEGLIKGSVIQFHLARTVLVRSSGTISADGM 595

Query:   597 GCTHGVGRGKVFDNXXXXXXXXXXXXXXXXXXXSFIDGGATYGDANLPCELGSGSGNDNL 656
             GC  GVG G+   +                   + I+GG +YG+A+LPCELGSGSGN+  
Sbjct:   596 GCKGGVGTGRFLRSGIGSGGGHGGKGGSGCYNHTCIEGGESYGNADLPCELGSGSGNEES 655

Query:   657 XXXXXXXXXVVMGSLEHSLTSLSVYGSIRADGESFEEEIHQQDGRLISTVXXXXXXXXTI 716
                      +V+GSLEH L+SLS+ GSI  DGES  + +    G   S++        T+
Sbjct:   656 TDSVAGGGIIVLGSLEHPLSSLSLEGSITTDGESPRKTLK---GLSNSSLGPGGGSGGTV 712

Query:   717 LLFIHTLVLGEXXXXXXXXXXXXXXXXXXXXXXXXXFHWSDIPIGDEYLPLASVNGSIDX 776
             LLF+ TL +G                          FHWSDIP GD Y P+A V G +  
Sbjct:   713 LLFLRTLEIGRSAILSSIGGNGSLKGGGGGSGGRIHFHWSDIPTGDVYHPVAIVKGRVYV 772

Query:   777 XXXXXXXXXXXXXXXTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCSSNELPH 836
                            T+TGKACP GLYG+FCEECP GT+KNV+GSD+ALC  C +N++PH
Sbjct:   773 RGGMGIIEDNIGGNGTLTGKACPEGLYGLFCEECPSGTYKNVTGSDKALCHLCPANDIPH 832

Query:   837 RALYIPIRGGVTECPCPYKCVSERYHMPHCYTTLEELVYTFGGPWXXXXXXXXXXXXXXX 896
             RA+Y+ +RGGV E PCPYKC+S+RYHMPHCYTTLEEL+YTFGGPW               
Sbjct:   833 RAVYVTVRGGVAETPCPYKCISDRYHMPHCYTTLEELIYTFGGPWLFGVLLVVVLLLLAL 892

Query:   897 XXXXXRMKYMGGDELPALVPAR---RIDHSFPFLESLNEVMETNRTEESQSHVHRMYFMG 953
                  RMK++ GDEL    P +   +IDHSFPFLESLNEVMET+R EESQ H+HR+YF+G
Sbjct:   893 VFSVARMKFVSGDELHGSAPTQHGSQIDHSFPFLESLNEVMETSRVEESQGHMHRIYFLG 952

Query:   954 QNTFSEPWHLPHSPPEQVIEIV 975
              NTFSEPWHL H+PPE++ EIV
Sbjct:   953 PNTFSEPWHLSHTPPEEIKEIV 974


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      975       782   0.00094  121 3  11 22  0.41    34
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  409 KB (2197 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  52.76u 0.11s 52.87t   Elapsed:  00:00:03
  Total cpu time:  52.76u 0.11s 52.87t   Elapsed:  00:00:03
  Start:  Fri May 10 07:46:22 2013   End:  Fri May 10 07:46:25 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	975
PF07699	48	GCC2_GCC3: GCC2 and GCC3; InterPro: IPR011641 Prot	96.93
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	96.31
PF07562	54	NCD3G: Nine Cysteines Domain of family 3 GPCR; Int	94.01
PHA02637	127	TNF-alpha-receptor-like protein; Provisional	93.4
cd00185	98	TNFR Tumor necrosis factor receptor (TNFR) domain;	89.11
PHA02637	127	TNF-alpha-receptor-like protein; Provisional	82.74

>PF07699 GCC2_GCC3: GCC2 and GCC3; InterPro: IPR011641 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.93  E-value=0.0005  Score=56.54  Aligned_cols=26  Identities=31%  Similarity=0.887  Sum_probs=22.8

Q ss_pred             ccceeCCCCceeccCCCCCCCcccCCCC
Q 002049          805 VFCEECPVGTFKNVSGSDRALCRNCSSN  832 (975)
Q Consensus       805 ~fC~eCP~GtYKn~~gs~~~~C~pCp~~  832 (975)
                      .-|++||+||||+..|+  ..|++||.+
T Consensus         9 ~~C~~Cp~GtYq~~~g~--~~C~~Cp~g   34 (48)
T PF07699_consen    9 NKCQPCPKGTYQDEEGQ--TSCTPCPPG   34 (48)
T ss_pred             CccCCCCCCccCCccCC--ccCccCcCC
Confidence            36999999999999975  599999974

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. This entry represents various ephrin type A and B receptors, which have tyrosine kinase activity.

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=96.31  E-value=0.0036  Score=76.41  Aligned_cols=55  Identities=33%  Similarity=0.776  Sum_probs=39.0

Q ss_pred             CCCCCCCc----cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccCCccCCCCCccccCCcccC
Q 002049          796 KACPRGLY----GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSERYHM  863 (975)
Q Consensus       796 ~~CP~G~y----G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rggv~~~~Cpy~C~s~~y~~  863 (975)
                      =-|-+||.    +.-|+.||.||||...+  ..+|.+||.++..+       ..|  .+.|  +|.++.|+-
T Consensus       261 C~C~aGye~~~~~~~C~aCp~G~yK~~~~--~~~C~~CP~~S~s~-------~eg--a~~C--~C~~gyyRA  319 (996)
T KOG0196|consen  261 CVCKAGYEEAENGKACQACPPGTYKASQG--DSLCLPCPPNSHSS-------SEG--ATSC--TCENGYYRA  319 (996)
T ss_pred             eeecCCCCcccCCCcceeCCCCcccCCCC--CCCCCCCCCCCCCC-------CCC--CCcc--cccCCcccC
Confidence            46888883    45799999999999874  69999999865532       122  3455  467666643

>PF07562 NCD3G: Nine Cysteines Domain of family 3 GPCR; InterPro: IPR011500 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=94.01  E-value=0.012  Score=50.02  Aligned_cols=36  Identities=33%  Similarity=0.826  Sum_probs=20.9

Q ss_pred             cCCCCCCCc-----cc-----cceeCCCCceeccCCCCCCCcccCCCC
Q 002049          795 GKACPRGLY-----GV-----FCEECPVGTFKNVSGSDRALCRNCSSN  832 (975)
Q Consensus       795 g~~CP~G~y-----G~-----fC~eCP~GtYKn~~gs~~~~C~pCp~~  832 (975)
                      .++|++|++     +.     -|++||.|+|.|.+  |...|++||.+
T Consensus         6 S~~C~pG~~k~~~~~~~~CCw~C~~C~~~~is~~~--~~~~C~~C~~~   51 (54)
T PF07562_consen    6 SEPCPPGQRKKIQKGQPSCCWDCVPCPEGEISNQT--DSTSCTKCPEG   51 (54)
T ss_dssp             S----TTTEEEE--SSS-S--EEEE--TTEEEE----ETTEEEE--TT
T ss_pred             CCCCCCCCEECccCCCcceEEEeecCCCCcEECCC--CccccccCCCc
Confidence            478999984     32     39999999999987  67999999964

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). GPCR family 3 receptors (also known as family C) are structurally similar to other GPCRs, but do not show any significant sequence similarity and thus represent a distinct group. Structurally they are composed of four elements; an N-terminal signal sequence; a large hydrophilic extracellular agonist-binding region containing several conserved cysteine residues which could be involved in disulphide bonds; a shorter region containing seven transmembrane domains; and a C-terminal cytoplasmic domain of variable length []. Family 3 members include the metabotropic glutamate receptors, the extracellular calcium-sensing receptors, the gamma-amino-butyric acid (GABA) type B receptors, and the vomeronasal type-2 receptors [, , , ]. As these receptors regulate many important physiological processes they are potentially promising targets for drug development. This entry represents a conserved sequence, found in the extracellular region, that contains several highly-conserved Cys residues that are predicted to form disulphide bridges.; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway; PDB: 2E4X_B 2E4Y_A 2E4U_B 2E4V_B 2E4W_A.

>PHA02637 TNF-alpha-receptor-like protein; Provisional

Probab=93.40  E-value=0.093  Score=52.16  Aligned_cols=58  Identities=22%  Similarity=0.543  Sum_probs=40.9

Q ss_pred             CCCCCCc--c-ccceeCCCCceeccCCC--CCCCcccCCCCCCCCCcceeeccCCccCCCCCccccCC
Q 002049          797 ACPRGLY--G-VFCEECPVGTFKNVSGS--DRALCRNCSSNELPHRALYIPIRGGVTECPCPYKCVSE  859 (975)
Q Consensus       797 ~CP~G~y--G-~fC~eCP~GtYKn~~gs--~~~~C~pCp~~~~p~ra~~i~~rggv~~~~Cpy~C~s~  859 (975)
                      .|..+-|  + .-|.+||.|||+...=+  ....|.|||..++-...++..     ....|.-.|+++
T Consensus        31 ~C~e~EY~~~~~CC~kCPPGt~v~~~Ct~~t~T~C~PCp~GTYTe~~N~~~-----~C~~C~~~Cd~~   93 (127)
T PHA02637         31 KCKDNEYKRHNLCCLSCPPGTYASRLCDIKTNTQCTPCGSGTFTSHNNHLP-----ACLSCNGRCDRV   93 (127)
T ss_pred             CCCCCcCcCCCeEcCCCCCCCEEeCcCCCCCCcccccCCCCCeeccCCCCC-----cccccCCccCcc
Confidence            6888865  3 35999999999873221  246899999877765555443     367888888864

>cd00185 TNFR Tumor necrosis factor receptor (TNFR) domain; superfamily of TNF-like receptor domains

Probab=89.11  E-value=0.67  Score=43.45  Aligned_cols=66  Identities=24%  Similarity=0.543  Sum_probs=41.1

Q ss_pred             EecCCCCCCCcc---------ccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccCCc-cCCCCCccccCCccc
Q 002049          793 VTGKACPRGLYG---------VFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGV-TECPCPYKCVSERYH  862 (975)
Q Consensus       793 i~g~~CP~G~yG---------~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rggv-~~~~Cpy~C~s~~y~  862 (975)
                      .-=+.||+|++-         .-|++||.|||++... ....|++|..  -+ ...++....-. ..+.|-  |.++.|-
T Consensus        12 ~cC~~C~pG~~~~~~C~~~~~t~C~~C~~g~ys~~~~-~~~~C~~c~~--C~-~g~~~~~~ct~t~dt~C~--C~~G~y~   85 (98)
T cd00185          12 LCCDQCPPGTYLSKDCTPGSDTVCEPCPPGTYTDSWN-HLPKCLSCRT--CD-SGLVEKAPCTATRNTVCG--CKPGFYC   85 (98)
T ss_pred             CCCCCCCCCccCCCcCCCCCCCeecCCCCCCcccCCC-CCCcCCcCcc--CC-CCCEEEccCCCCCCCeEe--CCCCCEe
Confidence            455889999852         3599999999998653 2368999975  43 23344333322 223564  7777664


Q ss_pred             CC
Q 002049          863 MP  864 (975)
Q Consensus       863 ~p  864 (975)
                      .+
T Consensus        86 ~~   87 (98)
T cd00185          86 LT   87 (98)
T ss_pred             cC
Confidence            43

When bound to TNF-like cytokines, TNFRs trigger multiple signal transduction pathways, they are involved in inflammation response, apoptosis, autoimmunity and organogenesis. TNFRs domains are elongated with generally three tandem repeats of cysteine-rich domains (CRDs). They fit in the grooves between protomers within the ligand trimer. Some TNFRs, such as NGFR and HveA, bind ligands with no structural similarity to TNF and do not bind ligand trimers.

>PHA02637 TNF-alpha-receptor-like protein; Provisional

Probab=82.74  E-value=1  Score=45.01  Aligned_cols=41  Identities=27%  Similarity=0.665  Sum_probs=30.3

Q ss_pred             CCceEecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCC
Q 002049          789 GNGTVTGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCS  830 (975)
Q Consensus       789 ~nGti~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp  830 (975)
                      ..+.+-=+.||||+|         ..-|.+||.|||-...- ....|.+|.
T Consensus        38 ~~~~~CC~kCPPGt~v~~~Ct~~t~T~C~PCp~GTYTe~~N-~~~~C~~C~   87 (127)
T PHA02637         38 KRHNLCCLSCPPGTYASRLCDIKTNTQCTPCGSGTFTSHNN-HLPACLSCN   87 (127)
T ss_pred             cCCCeEcCCCCCCCEEeCcCCCCCCcccccCCCCCeeccCC-CCCcccccC
Confidence            456667789999984         45799999999976432 245688886

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	975
1jma_B	167	Herpesvirus entry mediator; V-type IG molecule and	93.09
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	92.71
3me4_A	216	Tumor necrosis factor receptor superfamily member;	91.74
1ext_A	162	Tumor necrosis factor receptor; binding protein, c	90.28
4fhq_A	134	Tumor necrosis factor receptor superfamily member;	89.64
1sg1_X	161	Tumor necrosis factor receptor superfamily member	89.41
2uwi_A	142	CRME protein; receptor, poxvirus TNF receptor, rec	89.36
2hey_R	146	Tumor necrosis factor receptor superfamily member;	89.25
3k51_B	176	Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity,	89.07
1sg1_X	161	Tumor necrosis factor receptor superfamily member	88.95
3u3p_A	313	Tumor necrosis factor receptor superfamily member;	88.87
1ext_A	162	Tumor necrosis factor receptor; binding protein, c	88.83
1du3_A	130	Death receptor 5; trail, DR5, complex; 2.20A {Homo	88.81
3alq_R	173	Tumor necrosis factor receptor superfamily member;	88.8
3alq_R	173	Tumor necrosis factor receptor superfamily member;	88.07
3tje_F	156	Tumor necrosis factor receptor superfamily member;	87.31
2e4u_A	555	Metabotropic glutamate receptor 3; G-protein-coupl	86.72
3tje_F	156	Tumor necrosis factor receptor superfamily member;	86.08
1jma_B	167	Herpesvirus entry mediator; V-type IG molecule and	84.34
3urf_Z	171	Tumor necrosis factor receptor superfamily member;	83.72
3urf_Z	171	Tumor necrosis factor receptor superfamily member;	82.54
3k51_B	176	Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity,	82.17
3qd6_R	177	CD40L receptor, tumor necrosis factor receptor sup	80.06

>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*

Probab=93.09  E-value=0.049  Score=54.01  Aligned_cols=64  Identities=22%  Similarity=0.504  Sum_probs=40.8

Q ss_pred             ecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCC-cceeecc-CCccCCCCCccccCCccc
Q 002049          794 TGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHR-ALYIPIR-GGVTECPCPYKCVSERYH  862 (975)
Q Consensus       794 ~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~r-a~~i~~r-ggv~~~~Cpy~C~s~~y~  862 (975)
                      .=+.||+|+|         ...|++||.|||++.... ...|.+|+.  -+.. ..|+... .....+.|  .|.++.|.
T Consensus        15 ~C~~CppG~~~~~~C~~~~~t~C~~Cp~GtY~~~~n~-~~~C~~C~~--C~~~~g~~~~~~Ct~t~~t~C--~C~~G~y~   89 (167)
T 1jma_B           15 CCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNG-LSKCLQCQM--CDPAMGLRASRNCSRTENAVC--GCSPGHFC   89 (167)
T ss_dssp             CCBCBCTTEEEEECCCSSSCCEEEECCTTEECSSCBC-SSCCEECCC--CCTTTTEEEEECCCSSSCCEE--EECTTEEE
T ss_pred             CCCCCCCCCEeccCCCCCCCCcCCcCCCCccccccCc-CccccCCcc--cccCCCeEEeccCCCCCCCcc--cCCCCcee
Confidence            4467888875         357999999999986432 467888863  3221 2333222 23345678  89888873

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=92.71  E-value=0.031  Score=64.84  Aligned_cols=37  Identities=27%  Similarity=0.592  Sum_probs=30.2

Q ss_pred             CCCCCCCc--cccceeCCCCceeccCCCCCCCcccCCCCCC
Q 002049          796 KACPRGLY--GVFCEECPVGTFKNVSGSDRALCRNCSSNEL  834 (975)
Q Consensus       796 ~~CP~G~y--G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~  834 (975)
                      =.|.+||.  +--|+.||.|+||...+  ...|++||.+..
T Consensus       265 C~C~~G~e~~~~~C~aC~~g~~k~~~~--~~~C~~CP~~S~  303 (536)
T 3fl7_A          265 CLCQAGYEKVEDACQACSPGFFKFEAS--ESPCLECPEHTL  303 (536)
T ss_dssp             CEECTTEEEETTEEEECCTTEECCSCC--SSCCEECCSSEE
T ss_pred             EeccCccccCCceeeecCCCCCcccCC--CCccccCCCCCC
Confidence            45888885  55799999999998764  589999997554

>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B

Probab=91.74  E-value=0.1  Score=54.29  Aligned_cols=65  Identities=14%  Similarity=0.287  Sum_probs=40.2

Q ss_pred             eEecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccCCc--cCCCCCccccCCc
Q 002049          792 TVTGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGV--TECPCPYKCVSER  860 (975)
Q Consensus       792 ti~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rggv--~~~~Cpy~C~s~~  860 (975)
                      ..-=+.||||+|         ...|++||.|||++.... ...|++|+.  -.....++.++...  ..+.|  .|.+++
T Consensus        43 ~~CC~~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n~-~~~C~~C~~--C~~~~~~~~~~~Ct~t~dtvC--~C~~G~  117 (216)
T 3me4_A           43 GRCCSRCEPGKYLSSKCTPTSDSVCLPCGPDEYLDTWNE-EDKCLLHKV--CDAGKALVAVDPGNHTAPRRC--ACTAGY  117 (216)
T ss_dssp             TEEEECBCTTEEEEECCBTTBCCEEEECCTTEECCSSBC-CSSCEECCC--CCGGGTEEEESTTCSSSCCEE--EECTTE
T ss_pred             CCCcCCCCCCceecccCCCCCCCccccCCCCCeecCCCC-CCcCCCCCC--CCCCcCeEEEecCCCCCCccc--cCCCCe
Confidence            345688888886         457999999999876421 478888885  43322244443332  22344  376666


Q ss_pred             c
Q 002049          861 Y  861 (975)
Q Consensus       861 y  861 (975)
                      |
T Consensus       118 y  118 (216)
T 3me4_A          118 H  118 (216)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R

Probab=90.28  E-value=0.14  Score=50.44  Aligned_cols=36  Identities=31%  Similarity=0.728  Sum_probs=25.2

Q ss_pred             cCCCCCCCc----------cccceeCCCCceeccCCCCCCCcccCCC
Q 002049          795 GKACPRGLY----------GVFCEECPVGTFKNVSGSDRALCRNCSS  831 (975)
Q Consensus       795 g~~CP~G~y----------G~fC~eCP~GtYKn~~gs~~~~C~pCp~  831 (975)
                      =+.||+|+|          -..|++||.|||.+.... ...|++|..
T Consensus        20 C~~CppG~~~~~~Ct~~~~~t~C~~C~~gty~~~~n~-~~~C~~C~~   65 (162)
T 1ext_A           20 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENH-LRHCLSCSK   65 (162)
T ss_dssp             EECBCTTEEEEECCSSTTSCCEEEECCTTEECCSSBC-CSSCEECCC
T ss_pred             CCCCCCCcccccccCCCCCCcccccCCCCccccccCC-CCcccccCC
Confidence            467788764          246888888888887643 466888773

>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*

Probab=89.64  E-value=0.21  Score=48.39  Aligned_cols=62  Identities=23%  Similarity=0.490  Sum_probs=38.7

Q ss_pred             cCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccCCcc--CCCCCccccCCcc
Q 002049          795 GKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGGVT--ECPCPYKCVSERY  861 (975)
Q Consensus       795 g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rggv~--~~~Cpy~C~s~~y  861 (975)
                      =+.||||+|         ...|++||.|||++... ....|++|..  -......+.++-...  .+.|.  |.++.|
T Consensus        18 C~~CppG~~~~~~C~~~~~t~C~pC~~gtys~~~n-~~~~C~~C~~--C~~~~g~~~~~~CT~t~dtvC~--C~~G~~   90 (134)
T 4fhq_A           18 CPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLN-GLSKCLQCQM--CDPAMGLRASRNCSRTENAVCG--CSPGHF   90 (134)
T ss_dssp             EECBCTTEEEEECCC--CCCEEEECCTTEECCSCB-CCSSCEECCC--CCGGGTEEEEECCCSSSCCEEE--ECTTEE
T ss_pred             CCCCCCCCEecccCCCCCCCcccCCCCCCEecCCC-CCCcCcCCCC--CCccCCeEEeccCCCCCCcccc--CCCCCE
Confidence            357777764         45799999999987642 2588999986  432223443333322  33453  777766

>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X

Probab=89.41  E-value=0.21  Score=48.92  Aligned_cols=63  Identities=24%  Similarity=0.486  Sum_probs=38.2

Q ss_pred             ecCCCCCCCc--------cccceeCCCC-ceeccCCCCCCCcccCCCCCCCCCcceeeccC-CccCCCCCccccCCccc
Q 002049          794 TGKACPRGLY--------GVFCEECPVG-TFKNVSGSDRALCRNCSSNELPHRALYIPIRG-GVTECPCPYKCVSERYH  862 (975)
Q Consensus       794 ~g~~CP~G~y--------G~fC~eCP~G-tYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rg-gv~~~~Cpy~C~s~~y~  862 (975)
                      -=+.||+|+|        ...|++||.| ||++.... ...|++|+.  -+. ..++.... -...+.|  .|.++.|.
T Consensus        15 ~C~~CppG~~~~~~C~~~~t~C~~C~~g~ty~~~~~~-~~~C~~C~~--C~~-~~~~~~~Ct~t~d~~C--~C~~G~y~   87 (161)
T 1sg1_X           15 CCKACNLGEGVAQPCGANQTVCEPCLDNVTFSDVVSA-TEPCKPCTE--CLG-LQSMSAPCVEADDAVC--RCAYGYYQ   87 (161)
T ss_dssp             BCCCBCTTEEEEECSSSSSCEEEECCTTTEECCSCBS-SCCCEECCC--CCT-TEEEEECCBTTBCCEE--EECTTEEE
T ss_pred             CCCCCCcCCeECCcCCCCCCcCcCCcCCCccccCCCC-CCcCcCCCC--CCC-cceeecCCCcccCcee--ccCCCeEe
Confidence            3467777775        3469999998 99876532 457888874  332 33443221 1233466  37777775

>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}

Probab=89.36  E-value=0.14  Score=49.87  Aligned_cols=63  Identities=25%  Similarity=0.580  Sum_probs=40.6

Q ss_pred             EecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccCC--ccCCCCCccccCCcc
Q 002049          793 VTGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRGG--VTECPCPYKCVSERY  861 (975)
Q Consensus       793 i~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rgg--v~~~~Cpy~C~s~~y  861 (975)
                      .-=+.||||+|         ...|++||.|||.+... ....|++|..-.  . ..++.++..  ...+.|  .|.++.|
T Consensus        15 ~cC~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n-~~~~C~~C~~C~--~-~~~~~~~~Ct~t~dtvC--~C~~G~y   88 (142)
T 2uwi_A           15 KCCKLCKPGTYSDHRCDKYSDTICGHCPSDTFTSIYN-RSPWCHSCRGPC--G-TNRVEVTPCTPTTNRIC--HCDSNSY   88 (142)
T ss_dssp             EEEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSB-CCSSCEECCCCC--C-TTEEEEECCBTTBCCEE--EECTTEE
T ss_pred             CCCCCCCCCCeeCccCCCCCCCccCcCCCCCCcccCC-CCCccCCCcCcc--c-CCeeEeecCCCCCCCEe--eCCCCcE
Confidence            34467888876         56799999999998753 245799998622  1 234433332  234466  4777777

>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R

Probab=89.25  E-value=0.12  Score=49.95  Aligned_cols=61  Identities=18%  Similarity=0.402  Sum_probs=38.1

Q ss_pred             cCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCC-cceeeccC-CccCCCCCccccCCcc
Q 002049          795 GKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHR-ALYIPIRG-GVTECPCPYKCVSERY  861 (975)
Q Consensus       795 g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~r-a~~i~~rg-gv~~~~Cpy~C~s~~y  861 (975)
                      =+.||+|+|         ...|++||.|||.+..+  ...|++|+.  -+.. ..++..+- -...+.|  .|.++.|
T Consensus        19 C~~C~pG~~~~~~Ct~~~~t~C~~C~~gty~~~~~--~~~C~~C~~--C~~~~g~~~~~~Ct~t~dt~C--~C~~G~y   90 (146)
T 2hey_R           19 CHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVS--SKPCKPCTW--CNLRSGSERKQLCTATQDTVC--RCRAGTQ   90 (146)
T ss_dssp             EECBCTTEEEEECCCSSCCCEEEECCTTEECCSCB--SSCCEECCC--CCGGGTEEEEECCBTTBCCEE--EECTTEE
T ss_pred             CCCCCCCCeecccCCCCCCCCcccCCCCCEECCCC--CCcCcccCC--CCCCCCceEeccCccCCCccc--cCCCCee
Confidence            478888875         35799999999998764  468999885  3322 12332222 1223446  4777766

>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D

Probab=89.07  E-value=0.23  Score=49.99  Aligned_cols=63  Identities=19%  Similarity=0.470  Sum_probs=38.2

Q ss_pred             EecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccC--CccCCCCCccccCCcc
Q 002049          793 VTGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRG--GVTECPCPYKCVSERY  861 (975)
Q Consensus       793 i~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rg--gv~~~~Cpy~C~s~~y  861 (975)
                      +-=+.||+|+|         ...|++||.|+|++..- ....|++|.. .-..  ..+.++.  -...+.|  .|.++.|
T Consensus        20 ~cC~~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n-~~~~C~~C~~-~C~~--~~~~~~~Ct~tsdtvC--~C~~G~~   93 (176)
T 3k51_B           20 LVCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWN-YLERCRYCNV-LCGE--REEEARACHATHNRAC--RCRTGFF   93 (176)
T ss_dssp             EEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCB-CCSSCEECCC-CCCS--SEEEEECCBTTBCCEE--EECTTEE
T ss_pred             CCCCCCCCCceeCccCCCCCCCccccCCCCCeecCCC-CCCcCccccC-cCCC--CCEEeccCcCCCCcee--eccCCee
Confidence            34466777765         46899999999987542 2468999973 1221  2332222  2233456  6887766

>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X

Probab=88.95  E-value=0.15  Score=49.86  Aligned_cols=37  Identities=32%  Similarity=0.879  Sum_probs=28.4

Q ss_pred             CCCCCCCc---cccceeCCCCceeccC-CCCCCCcccCCCC
Q 002049          796 KACPRGLY---GVFCEECPVGTFKNVS-GSDRALCRNCSSN  832 (975)
Q Consensus       796 ~~CP~G~y---G~fC~eCP~GtYKn~~-gs~~~~C~pCp~~  832 (975)
                      +.||.|+|   +.-|+.||.|+|.... +.....|.|||.+
T Consensus         2 ~~C~~g~y~~~~~~C~~CppG~~~~~~C~~~~t~C~~C~~g   42 (161)
T 1sg1_X            2 ETCSTGLYTHSGECCKACNLGEGVAQPCGANQTVCEPCLDN   42 (161)
T ss_dssp             CCCTTCCBCTTSCBCCCBCTTEEEEECSSSSSCEEEECCTT
T ss_pred             CCCCcccCccCCcCCCCCCcCCeECCcCCCCCCcCcCCcCC
Confidence            67999986   4569999999997652 1235799999974

>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A

Probab=88.87  E-value=0.21  Score=54.72  Aligned_cols=37  Identities=41%  Similarity=0.908  Sum_probs=28.0

Q ss_pred             EecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCC
Q 002049          793 VTGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCS  830 (975)
Q Consensus       793 i~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp  830 (975)
                      +-=+.||+|+|         ...|++||.|+|++... ....|.+|.
T Consensus        24 ~CC~~CpPGtyv~~~Ct~~~dt~C~pCp~GtYt~~~N-~~~~C~~C~   69 (313)
T 3u3p_A           24 LTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHEN-GIEKCHDCS   69 (313)
T ss_dssp             EEEECBCTTEEEEECCBTTBCCEEEECCTTEECCSCB-CCSSCEECC
T ss_pred             CCCCCCCCCceecCcCCCCCCCccccCCCCceeccCC-CCCcCcccc
Confidence            44567888876         45799999999998642 247898887

>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R

Probab=88.83  E-value=0.13  Score=50.66  Aligned_cols=40  Identities=30%  Similarity=0.754  Sum_probs=30.0

Q ss_pred             CCCCCCCcc------ccceeCCCCceeccCC---CCCCCcccCCCCCCC
Q 002049          796 KACPRGLYG------VFCEECPVGTFKNVSG---SDRALCRNCSSNELP  835 (975)
Q Consensus       796 ~~CP~G~yG------~fC~eCP~GtYKn~~g---s~~~~C~pCp~~~~p  835 (975)
                      ..||.|+|-      .-|+.||.|+|....-   .....|.|||.+++-
T Consensus         3 ~~C~~g~Y~~~~~~~~CC~~CppG~~~~~~Ct~~~~~t~C~~C~~gty~   51 (162)
T 1ext_A            3 SVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFT   51 (162)
T ss_dssp             CCCCTTEEECSSCTTCEEECBCTTEEEEECCSSTTSCCEEEECCTTEEC
T ss_pred             ccCCCCceeccCCCCCCCCCCCCCcccccccCCCCCCcccccCCCCccc
Confidence            579999762      3499999999987652   235789999975543

>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A

Probab=88.81  E-value=0.27  Score=47.11  Aligned_cols=66  Identities=15%  Similarity=0.322  Sum_probs=42.3

Q ss_pred             ceEecCCCCCCCcc----ccceeCCCC-ceeccCCCCCCCcccCCCCCCCCCcceeeccC-CccCCCCCccccCCccc
Q 002049          791 GTVTGKACPRGLYG----VFCEECPVG-TFKNVSGSDRALCRNCSSNELPHRALYIPIRG-GVTECPCPYKCVSERYH  862 (975)
Q Consensus       791 Gti~g~~CP~G~yG----~fC~eCP~G-tYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rg-gv~~~~Cpy~C~s~~y~  862 (975)
                      ....-+.||||+|=    ..|++||.| +|.+.... ...|.+|..  -+. ..++..+- -...+.|.  |.++.|.
T Consensus        21 ~~~~C~~CppG~~~~~~~t~C~pC~~g~ty~~~~n~-~~~C~~C~~--C~~-g~~~~~~Ct~t~dtvC~--C~~G~y~   92 (130)
T 1du3_A           21 SSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWND-LLFCLRCTR--CDS-GEVELSPCTTTRNTVCQ--CEEGTFR   92 (130)
T ss_dssp             CCCBTTBBCTTEEECSSSSCEEECCTTTEECCSSBC-CSSCEECCC--CCT-TEEEEECCCSSSCCEEE--ECTTCEE
T ss_pred             CCCccCCCCCCceecCCCCcCccCCCcCEEeCCCCC-CCcCcCCCC--CCc-ceeeeccCCCCCCCEec--CCCCeEE
Confidence            34466889999863    579999999 99876532 466888874  433 22332221 23445676  8877773

>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}

Probab=88.80  E-value=0.22  Score=49.43  Aligned_cols=63  Identities=17%  Similarity=0.356  Sum_probs=39.0

Q ss_pred             ecCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeeccC-CccCCCCCccccCCcc
Q 002049          794 TGKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPIRG-GVTECPCPYKCVSERY  861 (975)
Q Consensus       794 ~g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rg-gv~~~~Cpy~C~s~~y  861 (975)
                      -=+.||+|+|         ...|++||.|||++..+. ...|++|.. .-+. ..|..... ....+.|  .|.++.|
T Consensus        21 cC~~C~pG~~~~~~C~~~~~t~C~~C~~gty~~~~n~-~~~C~~C~~-~C~~-g~~~~~~Ct~t~d~~C--~C~~G~y   93 (173)
T 3alq_R           21 CCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNW-VPECLSCGS-RCSS-DQVETQACTREQNRIC--TCRPGWY   93 (173)
T ss_dssp             EEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBC-CSSCEECCC-CCCT-TEEEEECCCSSSCCEE--EECTTEE
T ss_pred             CCCCCCCCCeecccCCCCCCCcCCcCCCCccccCCCC-CCccCCCCC-cCCC-CCEEecCCCCCCCCee--ECCCCeE
Confidence            3478888864         346999999999987643 357988872 1222 23332221 2334567  5887777

>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}

Probab=88.07  E-value=0.15  Score=50.67  Aligned_cols=62  Identities=21%  Similarity=0.544  Sum_probs=38.4

Q ss_pred             cCCCCCCCc-----cccceeCCCCceeccC--CCCCCCcccCCCCCCCCCcceeeccCCc-cCCCCCccccCCccc
Q 002049          795 GKACPRGLY-----GVFCEECPVGTFKNVS--GSDRALCRNCSSNELPHRALYIPIRGGV-TECPCPYKCVSERYH  862 (975)
Q Consensus       795 g~~CP~G~y-----G~fC~eCP~GtYKn~~--gs~~~~C~pCp~~~~p~ra~~i~~rggv-~~~~Cpy~C~s~~y~  862 (975)
                      +..|++|.|     +.-|..||.|+|....  ......|.+||.+++      ....+.. ....|.-.|.++++.
T Consensus         5 ~~~C~~g~Y~~~~~~~cC~~C~pG~~~~~~C~~~~~t~C~~C~~gty------~~~~n~~~~C~~C~~~C~~g~~~   74 (173)
T 3alq_R            5 GSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTY------TQLWNWVPECLSCGSRCSSDQVE   74 (173)
T ss_dssp             --CCCTTEEEETTTTEEEECBCTTEEEEECCCSSCCCEEEECCTTEE------CCSSBCCSSCEECCCCCCTTEEE
T ss_pred             cCcCCCCccccCCCCcCCCCCCCCCeecccCCCCCCCcCCcCCCCcc------ccCCCCCCccCCCCCcCCCCCEE
Confidence            468999976     3469999999998752  113579999997444      4322221 233444467776653

>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*

Probab=87.31  E-value=0.21  Score=49.54  Aligned_cols=62  Identities=19%  Similarity=0.396  Sum_probs=31.8

Q ss_pred             cCCCCCCCc----------cccceeCCCC-ceeccCCCCCCCcccCCCCCCCCCcceeeccCC--ccCCCCCccccCCcc
Q 002049          795 GKACPRGLY----------GVFCEECPVG-TFKNVSGSDRALCRNCSSNELPHRALYIPIRGG--VTECPCPYKCVSERY  861 (975)
Q Consensus       795 g~~CP~G~y----------G~fC~eCP~G-tYKn~~gs~~~~C~pCp~~~~p~ra~~i~~rgg--v~~~~Cpy~C~s~~y  861 (975)
                      =+.||||+|          -..|++||.| +|.+... ....|++|..  -.....+..++-.  .+.+.|  .|.++.|
T Consensus        44 C~~CppG~~v~~~Ct~~~~~t~C~pC~~g~ty~~~~n-~~~~C~~C~~--C~~~~g~~~~~~CT~t~dtvC--~C~~G~f  118 (156)
T 3tje_F           44 HKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAH-FSSKCRRCRL--CDEGHGLEVEINCTRTQNTKC--RCKPNFF  118 (156)
T ss_dssp             SSCBCTTEEESSCCCSSSCCCCEEECCTTTEECSSCB-SCSCCEECCC--CCGGGTEEEEECCBTTBCCEE--EECTTEE
T ss_pred             CCCCCCCCeECCcCCCCCCCCcceeCCCCCeeeccCC-CCCcCcCCCC--CCCCcceEEeccccCCCCCee--eCCCCCE
Confidence            356666654          2467777777 6776532 2356777664  3322122222222  123345  6776666

>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*

Probab=86.72  E-value=0.16  Score=57.76  Aligned_cols=40  Identities=20%  Similarity=0.518  Sum_probs=30.2

Q ss_pred             EecCCCCCCCc-----cc----cceeCCCCceeccCCCCCCCcccCCCCCCCC
Q 002049          793 VTGKACPRGLY-----GV----FCEECPVGTFKNVSGSDRALCRNCSSNELPH  836 (975)
Q Consensus       793 i~g~~CP~G~y-----G~----fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~  836 (975)
                      +=...||||+.     |.    -|.+||.|.|.  +  |...|.+||.+..|+
T Consensus       484 ~CS~~C~pG~rk~~~~g~~CC~~C~~C~~~~~~--t--d~~~C~~Cp~~~wpn  532 (555)
T 2e4u_A          484 QCSDPCAPNEMKNMQPGDVCCWICIPCEPYEYL--V--DEFTCMDCGPGQWPT  532 (555)
T ss_dssp             CSSCCCCTTTEEEECCSSSSCCEEEECCTTEEE--E--ETTEEEECCTTEEEC
T ss_pred             eeCCCCCCCeeeeecCCCeeEEECccCCCceec--C--CCccceeCCcccCcC
Confidence            34478999983     22    39999999997  3  679999999755554

>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*

Probab=86.08  E-value=0.55  Score=46.60  Aligned_cols=62  Identities=23%  Similarity=0.385  Sum_probs=30.0

Q ss_pred             eEecCCCCCCCc---cccceeCCCCceeccCCC---CCCCcccCCCC-CCCCCcceeeccCCccCCCCCccccCC
Q 002049          792 TVTGKACPRGLY---GVFCEECPVGTFKNVSGS---DRALCRNCSSN-ELPHRALYIPIRGGVTECPCPYKCVSE  859 (975)
Q Consensus       792 ti~g~~CP~G~y---G~fC~eCP~GtYKn~~gs---~~~~C~pCp~~-~~p~ra~~i~~rggv~~~~Cpy~C~s~  859 (975)
                      +.-...||.+.|   +.-|..||.|+|....-.   +...|.|||.+ ++-...++..     ....|.+ |.++
T Consensus        26 ~~~~~~C~~~~Y~~~~~CC~~CppG~~v~~~Ct~~~~~t~C~pC~~g~ty~~~~n~~~-----~C~~C~~-C~~~   94 (156)
T 3tje_F           26 TTVETQNLEGLHHDGQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSS-----KCRRCRL-CDEG   94 (156)
T ss_dssp             -------------CCTTCSSCBCTTEEESSCCCSSSCCCCEEECCTTTEECSSCBSCS-----CCEECCC-CCGG
T ss_pred             eecccCCCCCcEECcCeECCCCCCCCeECCcCCCCCCCCcceeCCCCCeeeccCCCCC-----cCcCCCC-CCCC
Confidence            344578999986   445899999999764322   14689999975 3432222211     2345664 7765

>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*

Probab=84.34  E-value=0.36  Score=47.77  Aligned_cols=39  Identities=18%  Similarity=0.503  Sum_probs=27.0

Q ss_pred             CCCCCCCc---cccceeCCCCceeccC--CCCCCCcccCCCCCC
Q 002049          796 KACPRGLY---GVFCEECPVGTFKNVS--GSDRALCRNCSSNEL  834 (975)
Q Consensus       796 ~~CP~G~y---G~fC~eCP~GtYKn~~--gs~~~~C~pCp~~~~  834 (975)
                      ..|+.|.|   +.-|+.||.|+|....  ......|.|||.+++
T Consensus         2 ~~C~~g~Y~~~~~~C~~CppG~~~~~~C~~~~~t~C~~Cp~GtY   45 (167)
T 1jma_B            2 PSCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTY   45 (167)
T ss_dssp             --CCTTBCCBTTBCCBCBCTTEEEEECCCSSSCCEEEECCTTEE
T ss_pred             CCCCCCCEECCCcCCCCCCCCCEeccCCCCCCCCcCCcCCCCcc
Confidence            46999975   4569999999998531  112469999997443

>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R

Probab=83.72  E-value=0.54  Score=47.17  Aligned_cols=35  Identities=37%  Similarity=0.903  Sum_probs=27.2

Q ss_pred             CCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCC
Q 002049          796 KACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSS  831 (975)
Q Consensus       796 ~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~  831 (975)
                      ..||+|++         ...|++||.|||++.. |+...|+||..
T Consensus       101 t~C~~G~~v~~~~t~~~dt~C~~C~~Gtfs~~~-ss~~~C~p~T~  144 (171)
T 3urf_Z          101 RSCPPGFGVVQAGTPERNTVCKRCPDGFFSNET-SSKAPCRKHTN  144 (171)
T ss_dssp             CCBCTTEEEEECCCSSSCCEEEECCTTEECSSC-BSSCCCEECCC
T ss_pred             CcCCCCceEeecCccCCCcccccCCCCcccCCC-CCCCccccCCc
Confidence            67899973         3469999999999874 34688999874

>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R

Probab=82.54  E-value=0.47  Score=47.62  Aligned_cols=34  Identities=29%  Similarity=0.728  Sum_probs=25.8

Q ss_pred             CCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCC
Q 002049          796 KACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCS  830 (975)
Q Consensus       796 ~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp  830 (975)
                      +.||+|+|         ...|++||.|+|++... ....|++|.
T Consensus        21 ~~CppG~~~~~~Ct~~~~t~C~~C~~gty~~~~n-~~~~C~~C~   63 (171)
T 3urf_Z           21 DKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWH-TSDECLYCS   63 (171)
T ss_dssp             ECBCTTEEEEECCCSSSCCEEEECCTTEECCSCB-CCSSCEECC
T ss_pred             CCCCCCceecccCCCCCCCccccCCCCcEecCCC-CCCccccCc
Confidence            56666664         46799999999997642 257899998

>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D

Probab=82.17  E-value=0.88  Score=45.77  Aligned_cols=45  Identities=29%  Similarity=0.597  Sum_probs=32.7

Q ss_pred             CCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCCCCCCCCcceeec
Q 002049          796 KACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSSNELPHRALYIPI  843 (975)
Q Consensus       796 ~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~~~~p~ra~~i~~  843 (975)
                      ..||+|++         ...|++||.|||.+.. +....|+||..  -...+.++.+
T Consensus       103 s~C~pG~~v~~~~t~~~Dt~C~~C~~GtFs~~~-s~~~~C~p~t~--C~~~G~~~~~  156 (176)
T 3k51_B          103 ASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASS-SSSEQCQPHRN--CTALGLALNV  156 (176)
T ss_dssp             CCCCTTEEEEECCCSSSCCEEEECCTTEECCSC-SSSCCCEECCC--STTTTCCEEE
T ss_pred             ccCCCCcEEeecCcccCCCccccCCCCcccCCC-CCCCcccCCCc--cCCCCeeEec
Confidence            68999984         3579999999999875 33689999985  4433444443

>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}

Probab=80.06  E-value=1.4  Score=44.00  Aligned_cols=36  Identities=17%  Similarity=0.323  Sum_probs=25.4

Q ss_pred             cCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCCC
Q 002049          795 GKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCSS  831 (975)
Q Consensus       795 g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp~  831 (975)
                      =+.||+|+|         ...|++||.|+|++... ....|++|..
T Consensus        18 C~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n-~~~~C~~C~~   62 (177)
T 3qd6_R           18 CSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWN-RETHCHQHKY   62 (177)
T ss_dssp             ECCBCTTBCCCBCCCSSCCCBCCBCCSSEECCSSB-CCSSCEECCC
T ss_pred             CCCCCCCCEeccCCCCCCCCccccCCCCceecCCC-CCCcCCCCCc
Confidence            467777764         34799999999987542 1357888874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	975
d1sg1x3	42	Low affinity neurotrophin receptor p75NTR {Rat (Ra	95.83
d1jmab1	56	Cellular receptor HveA {Human (Homo sapiens) [TaxI	93.48
d1exta1	59	Tumor necrosis factor (TNF) receptor {Human (Homo	93.39
d1jmab1	56	Cellular receptor HveA {Human (Homo sapiens) [TaxI	92.2
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	89.97
d2heyr3	54	Tumor necrosis factor receptor superfamily member	85.16

>d1sg1x3 g.24.1.1 (X:96-137) Low affinity neurotrophin receptor p75NTR {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Low affinity neurotrophin receptor p75NTR
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.83  E-value=0.0016  Score=50.31  Aligned_cols=30  Identities=33%  Similarity=0.803  Sum_probs=24.2

Q ss_pred             CCCCCCC---------ccccceeCCCCceeccCCCCCCCc
Q 002049          796 KACPRGL---------YGVFCEECPVGTFKNVSGSDRALC  826 (975)
Q Consensus       796 ~~CP~G~---------yG~fC~eCP~GtYKn~~gs~~~~C  826 (975)
                      +.||+|+         .-+-|++||.|||.+++ |..+.|
T Consensus         3 s~CppG~GV~~~gt~~~DT~C~~C~~GtFSd~~-Ss~~~C   41 (42)
T d1sg1x3           3 SVCEVGSGLVFSCQDKQNTVCEECPEGTYSDEA-NHVDPC   41 (42)
T ss_dssp             CCBCTTEEEEECCBTTBCCEEEECCTTEECCSC-BSSCCC
T ss_pred             ccCCCCcCeeecCcCCCCceeeECcCCcccCcC-CCcCcc
Confidence            5799998         34589999999999987 456666

>d1jmab1 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Cellular receptor HveA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.013  Score=46.88  Aligned_cols=37  Identities=19%  Similarity=0.515  Sum_probs=20.6

Q ss_pred             CCCCCc---cccceeCCCCceeccCC--CCCCCcccCCCCCC
Q 002049          798 CPRGLY---GVFCEECPVGTFKNVSG--SDRALCRNCSSNEL  834 (975)
Q Consensus       798 CP~G~y---G~fC~eCP~GtYKn~~g--s~~~~C~pCp~~~~  834 (975)
                      |++|.|   +.=|..||.|||.....  .....|.|||.+++
T Consensus         1 C~~geY~~~~~CC~~CppG~~~~~~C~~~~~t~C~pC~~gty   42 (56)
T d1jmab1           1 CKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTY   42 (56)
T ss_dssp             CCTTBCCBTTBCCBCBCTTEEEEECCCSSSCCEEEECCTTEE
T ss_pred             CCCCcEeCCCeEcCCCCCCceEcccCCCCCCCeeccCcCCCc
Confidence            556654   22377777777754321  12356777776444

>d1exta1 g.24.1.1 (A:13-71) Tumor necrosis factor (TNF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Tumor necrosis factor (TNF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.013  Score=47.52  Aligned_cols=39  Identities=33%  Similarity=0.887  Sum_probs=28.5

Q ss_pred             CCCCCCc------cccceeCCCCceecc--CCC-CCCCcccCCCCCCC
Q 002049          797 ACPRGLY------GVFCEECPVGTFKNV--SGS-DRALCRNCSSNELP  835 (975)
Q Consensus       797 ~CP~G~y------G~fC~eCP~GtYKn~--~gs-~~~~C~pCp~~~~p  835 (975)
                      .||.|-|      +.=|..||.|+|...  +.+ ....|.|||.+++-
T Consensus         2 ~C~~g~Y~~~~~~~~cC~~CppG~~~~~~Ct~~~~~t~C~pC~~gtyt   49 (59)
T d1exta1           2 VCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFT   49 (59)
T ss_dssp             CCCTTEEECSSCTTCEEECBCTTEEEEECCSSTTSCCEEEECCTTEEC
T ss_pred             CCCCccccccCCCCcCCCCCCCCCeecCccCCCCCCCEeccCCCCCcc
Confidence            6999965      334999999999643  233 35899999975553

>d1jmab1 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Cellular receptor HveA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.034  Score=44.43  Aligned_cols=35  Identities=31%  Similarity=0.748  Sum_probs=26.6

Q ss_pred             cCCCCCCCc---------cccceeCCCCceeccCCCCCCCcccCC
Q 002049          795 GKACPRGLY---------GVFCEECPVGTFKNVSGSDRALCRNCS  830 (975)
Q Consensus       795 g~~CP~G~y---------G~fC~eCP~GtYKn~~gs~~~~C~pCp  830 (975)
                      =+.||+|+|         ...|++||.|||.... .....|++|.
T Consensus        13 C~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~-n~~~~C~~Cr   56 (56)
T d1jmab1          13 CPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHL-NGLSKCLQCQ   56 (56)
T ss_dssp             CBCBCTTEEEEECCCSSSCCEEEECCTTEECSSC-BCSSCCEECC
T ss_pred             cCCCCCCceEcccCCCCCCCeeccCcCCCccCCC-CCCCccccCC
Confidence            466777765         4679999999998755 2357899984

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.97  E-value=0.052  Score=43.29  Aligned_cols=42  Identities=31%  Similarity=0.546  Sum_probs=34.4

Q ss_pred             cCCceEecCCCCCCCccccceeCCCCceeccCCCCCCCcccCC
Q 002049          788 GGNGTVTGKACPRGLYGVFCEECPVGTFKNVSGSDRALCRNCS  830 (975)
Q Consensus       788 g~nGti~g~~CP~G~yG~fC~eCP~GtYKn~~gs~~~~C~pCp  830 (975)
                      ...++++=..|+++|.|..|+.|..|+|.|... ....|+||.
T Consensus        13 ~~~~~~vC~~C~~~~~G~~Ce~C~~g~yg~P~~-~~g~C~pC~   54 (55)
T d1kloa1          13 PKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLG-SNGPVRLCR   54 (55)
T ss_dssp             SSSCCEEECSCCTTEESTTSCEECTTEEEETTC-TTSSCEEEE
T ss_pred             CCCCCEEcCCCCCCCccCcccccCCccccCccc-CCCcCccCc
Confidence            345666667899999999999999999998653 357899986

>d2heyr3 g.24.1.1 (R:29-82) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TNF receptor-like
superfamily: TNF receptor-like
family: TNF receptor-like
domain: Tumor necrosis factor receptor superfamily member 4, OX40L receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.16  E-value=0.14  Score=40.73  Aligned_cols=39  Identities=26%  Similarity=0.515  Sum_probs=24.6

Q ss_pred             CCCCCCc---cccceeCCCCceeccCCC--CCCCcccCCCCCCC
Q 002049          797 ACPRGLY---GVFCEECPVGTFKNVSGS--DRALCRNCSSNELP  835 (975)
Q Consensus       797 ~CP~G~y---G~fC~eCP~GtYKn~~gs--~~~~C~pCp~~~~p  835 (975)
                      .|+.+-|   |.=|..||.|+|....-+  ....|.|||.+++-
T Consensus         2 ~C~~~eY~~~g~CC~~C~pG~~~~~~Cs~~~~t~C~pC~~gtyt   45 (54)
T d2heyr3           2 HCVGDTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYN   45 (54)
T ss_dssp             CBCSSEEEETTEEEECBCTTEEEEECCCSSCCCEEEECCTTEEC
T ss_pred             cCCcCcCcCCCeECCCCCCCCeEcCcCCCCCCCeeccCcCCCcc
Confidence            3666643   445888888888743211  24688888875553