Citrus Sinensis ID: 002089
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 969 | 2.2.26 [Sep-21-2011] | |||||||
| Q02909 | 967 | Phosphoenolpyruvate carbo | yes | no | 0.994 | 0.996 | 0.898 | 0.0 | |
| Q9FV65 | 967 | Phosphoenolpyruvate carbo | N/A | no | 0.995 | 0.997 | 0.898 | 0.0 | |
| Q84VW9 | 968 | Phosphoenolpyruvate carbo | yes | no | 0.995 | 0.996 | 0.884 | 0.0 | |
| Q9MAH0 | 967 | Phosphoenolpyruvate carbo | no | no | 0.995 | 0.997 | 0.885 | 0.0 | |
| Q9FV66 | 965 | Phosphoenolpyruvate carbo | N/A | no | 0.994 | 0.998 | 0.886 | 0.0 | |
| Q01647 | 967 | Phosphoenolpyruvate carbo | N/A | no | 0.995 | 0.997 | 0.883 | 0.0 | |
| P27154 | 964 | Phosphoenolpyruvate carbo | N/A | no | 0.993 | 0.998 | 0.886 | 0.0 | |
| P16097 | 960 | Phosphoenolpyruvate carbo | N/A | no | 0.990 | 1.0 | 0.880 | 0.0 | |
| P29194 | 960 | Phosphoenolpyruvate carbo | N/A | no | 0.990 | 1.0 | 0.887 | 0.0 | |
| P51061 | 967 | Phosphoenolpyruvate carbo | no | no | 0.994 | 0.996 | 0.876 | 0.0 |
| >sp|Q02909|CAPP1_SOYBN Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Glycine max GN=PPC16 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1786 bits (4625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/969 (89%), Positives = 924/969 (95%), Gaps = 5/969 (0%)
Query: 3 ANRNLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQECY 62
ANRNLEKMASIDAQLRLLVP KVSEDDKL+EYDALLLDRFLDILQDLHGEDLKETVQE Y
Sbjct: 2 ANRNLEKMASIDAQLRLLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQEVY 61
Query: 63 ELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRIKK 122
EL+AEYEGK+DP K +ELGN++TSLD GDSIV+AK+FSHMLNLANLAEE+QIAH RR K
Sbjct: 62 ELSAEYEGKHDPKKLEELGNLITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHSRR-NK 120
Query: 123 LKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVRRS 182
LKKGDFADEN+ATTESDIEET K+LV ++ KSP+E+FDALKNQTVDLVLTAHPTQSVRRS
Sbjct: 121 LKKGDFADENNATTESDIEETLKKLVVDMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRS 180
Query: 183 LLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGM 242
LLQKH RIRN L QLYAKDITPDDKQELDEALQREIQAAFRTDEIRRT PTPQDEMRAGM
Sbjct: 181 LLQKHGRIRNNLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGM 240
Query: 243 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 302
SYFHETIWKGVP FLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR
Sbjct: 241 SYFHETIWKGVPTFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 300
Query: 303 DVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSSKKD--AKHYIEFWKQ 360
DVCLLARMMAANLYYSQIEDLMFE+SMWRC+DELR RAD L+RSSKK+ AKHYIEFWK
Sbjct: 301 DVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELNRSSKKNSVAKHYIEFWKA 360
Query: 361 IPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC 420
IPPNEPYRV+LG+VR++LYQTRER R LLAHG SDIPEE FTNVE+FLEPLELCYRSLC
Sbjct: 361 IPPNEPYRVLLGEVRNRLYQTRERSRHLLAHGYSDIPEEETFTNVEEFLEPLELCYRSLC 420
Query: 421 SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEE 480
+CGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDV+DAITKHLEIGSY+EWSEE
Sbjct: 421 ACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEE 480
Query: 481 KRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVL 540
KRQ+WLLSELSGKRPLFGPDLP+TEEI DVLETFHVIAELP DNFGAYIISMATAPSDVL
Sbjct: 481 KRQQWLLSELSGKRPLFGPDLPQTEEIRDVLETFHVIAELPLDNFGAYIISMATAPSDVL 540
Query: 541 AVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS 600
AVELLQRECHVK PLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS
Sbjct: 541 AVELLQRECHVKHPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS 600
Query: 601 GKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI 660
GKDAGRFSAAWQLYKAQEELI VAKQYG+KLTMFHGRGGTVGRGGGPTHLAILSQPP+TI
Sbjct: 601 GKDAGRFSAAWQLYKAQEELIMVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETI 660
Query: 661 HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIA 720
HGSLRVTVQGEVIEQSFGE+HLCFRTLQRFTAATLEHGM PPISPKPEWR +MDEMAVIA
Sbjct: 661 HGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDEMAVIA 720
Query: 721 TEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQT 780
TEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRP+KR+PSGGIE+LRAIPWIFAWTQT
Sbjct: 721 TEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQT 780
Query: 781 RFHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALY 840
RFHLPVWLGFGAAFKHVI+KD+RN+H+LQEMYN WPFFRVTIDLVEMVFAKG+ IAALY
Sbjct: 781 RFHLPVWLGFGAAFKHVIEKDVRNIHVLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALY 840
Query: 841 DQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVC 900
D+LLVS+DLWSFGE+LR YEETK LLLQ+AGH+DLLEGDPYLKQRLRLRD+YITTLNVC
Sbjct: 841 DRLLVSEDLWSFGEQLRTMYEETKELLLQVAGHRDLLEGDPYLKQRLRLRDSYITTLNVC 900
Query: 901 QAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKG 960
QAYTLKRIRDPNY+VK+RPHIS+E +E KPADEL+ LN +SEYAPGLEDTLILTMKG
Sbjct: 901 QAYTLKRIRDPNYNVKLRPHISKESIEIS--KPADELITLNPTSEYAPGLEDTLILTMKG 958
Query: 961 IAAGLQNTG 969
IAAGLQNTG
Sbjct: 959 IAAGLQNTG 967
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Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Glycine max (taxid: 3847) EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1 |
| >sp|Q9FV65|CAPPC_FLATR Phosphoenolpyruvate carboxylase 2 OS=Flaveria trinervia GN=PPCC PE=1 SV=1 | Back alignment and function description |
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| >sp|Q84VW9|CAPP3_ARATH Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana GN=PPC3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9MAH0|CAPP1_ARATH Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis thaliana GN=PPC1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FV66|CAPPB_FLATR Phosphoenolpyruvate carboxylase 1 OS=Flaveria trinervia GN=PPCB PE=1 SV=1 | Back alignment and function description |
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| >sp|Q01647|CAPP1_FLAPR Phosphoenolpyruvate carboxylase OS=Flaveria pringlei GN=PPCA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P27154|CAPP_TOBAC Phosphoenolpyruvate carboxylase OS=Nicotiana tabacum GN=PPC PE=2 SV=1 | Back alignment and function description |
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| >sp|P16097|CAPP2_MESCR Phosphoenolpyruvate carboxylase 2 OS=Mesembryanthemum crystallinum GN=PPC2 PE=3 SV=1 | Back alignment and function description |
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| >sp|P29194|CAPP2_SORBI Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor PE=3 SV=1 | Back alignment and function description |
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| >sp|P51061|CAPP2_SOYBN Phosphoenolpyruvate carboxylase OS=Glycine max GN=PPC1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 969 | ||||||
| 259506726 | 967 | phosphoenolpyruvate carboxylase [Citrus | 0.997 | 1.0 | 0.962 | 0.0 | |
| 255579064 | 965 | Phosphoenolpyruvate carboxylase, putativ | 0.992 | 0.996 | 0.924 | 0.0 | |
| 149789409 | 965 | phosphoenolpyruvate carboxylase [Ricinus | 0.992 | 0.996 | 0.921 | 0.0 | |
| 449456583 | 965 | PREDICTED: phosphoenolpyruvate carboxyla | 0.994 | 0.998 | 0.912 | 0.0 | |
| 224114804 | 966 | predicted protein [Populus trichocarpa] | 0.996 | 1.0 | 0.916 | 0.0 | |
| 224121514 | 957 | predicted protein [Populus trichocarpa] | 0.987 | 1.0 | 0.921 | 0.0 | |
| 157812633 | 971 | phosphoenolpyruvate carboxylase [Gossypi | 0.993 | 0.991 | 0.912 | 0.0 | |
| 225461660 | 963 | PREDICTED: phosphoenolpyruvate carboxyla | 0.992 | 0.998 | 0.912 | 0.0 | |
| 255553993 | 965 | Phosphoenolpyruvate carboxylase, putativ | 0.994 | 0.998 | 0.906 | 0.0 | |
| 2266947 | 965 | phosphoenolpyruvate carboxylase 1 [Gossy | 0.994 | 0.998 | 0.899 | 0.0 |
| >gi|259506726|gb|ABK54024.2| phosphoenolpyruvate carboxylase [Citrus sinensis] | Back alignment and taxonomy information |
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Score = 1906 bits (4937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 933/969 (96%), Positives = 953/969 (98%), Gaps = 2/969 (0%)
Query: 1 MAANRNLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQE 60
MAANRNLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQE
Sbjct: 1 MAANRNLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQE 60
Query: 61 CYELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRI 120
CYELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRI
Sbjct: 61 CYELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRI 120
Query: 121 KKLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVR 180
KKLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVR
Sbjct: 121 KKLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVR 180
Query: 181 RSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRA 240
RSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRA
Sbjct: 181 RSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRA 240
Query: 241 GMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEV 300
GMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEV
Sbjct: 241 GMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEV 300
Query: 301 TRDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSSKKDAKHYIEFWKQ 360
TRDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSSKKDAKHYIEFWKQ
Sbjct: 301 TRDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSSKKDAKHYIEFWKQ 360
Query: 361 IPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC 420
IPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC
Sbjct: 361 IPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC 420
Query: 421 SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEE 480
SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEE
Sbjct: 421 SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEE 480
Query: 481 KRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVL 540
KRQEWLLSEL GKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVL
Sbjct: 481 KRQEWLLSELRGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVL 540
Query: 541 AVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS 600
AVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS
Sbjct: 541 AVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS 600
Query: 601 GKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI 660
GKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI
Sbjct: 601 GKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI 660
Query: 661 HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIA 720
HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWR +MDEMAVIA
Sbjct: 661 HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRALMDEMAVIA 720
Query: 721 TEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQT 780
T+EYRSIVF+EPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQT
Sbjct: 721 TKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQT 780
Query: 781 RFHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALY 840
RFHLPVWLGFGAAFKHVIQKDI+NLHMLQEMYN WPFFRVTIDLVEMVFAKG+ IAALY
Sbjct: 781 RFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALY 840
Query: 841 DQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVC 900
D+LLVS++L FGEKLR N+ ETK LLLQ+AGH+DLLEGDPYLKQRLRLRDAYITTLNVC
Sbjct: 841 DKLLVSEELQPFGEKLRANFAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVC 900
Query: 901 QAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKG 960
QAYTLK+IRDPN+HVKVRPH+S+E MES KPA ELV+LN +SEYAPGLEDT+ILTMKG
Sbjct: 901 QAYTLKQIRDPNFHVKVRPHLSKEYMESR--KPAAELVRLNPTSEYAPGLEDTVILTMKG 958
Query: 961 IAAGLQNTG 969
IAAG+QNTG
Sbjct: 959 IAAGMQNTG 967
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Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579064|ref|XP_002530381.1| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] gi|223530082|gb|EEF32001.1| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|149789409|gb|ABR29876.1| phosphoenolpyruvate carboxylase [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449456583|ref|XP_004146028.1| PREDICTED: phosphoenolpyruvate carboxylase, housekeeping isozyme-like [Cucumis sativus] gi|449516750|ref|XP_004165409.1| PREDICTED: phosphoenolpyruvate carboxylase, housekeeping isozyme-like [Cucumis sativus] gi|406353249|gb|AFS33790.1| phosphoenolpyruvate carboxylase protein [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224114804|ref|XP_002316861.1| predicted protein [Populus trichocarpa] gi|222859926|gb|EEE97473.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224121514|ref|XP_002330719.1| predicted protein [Populus trichocarpa] gi|222872495|gb|EEF09626.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|157812633|gb|ABV80356.1| phosphoenolpyruvate carboxylase [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|225461660|ref|XP_002285441.1| PREDICTED: phosphoenolpyruvate carboxylase, housekeeping isozyme isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255553993|ref|XP_002518037.1| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] gi|223543019|gb|EEF44555.1| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|2266947|gb|AAB80714.1| phosphoenolpyruvate carboxylase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 969 | ||||||
| UNIPROTKB|Q9FV65 | 967 | PPCC "Phosphoenolpyruvate carb | 0.995 | 0.997 | 0.873 | 0.0 | |
| TAIR|locus:2009600 | 967 | PPC1 "phosphoenolpyruvate carb | 0.995 | 0.997 | 0.860 | 0.0 | |
| TAIR|locus:2086315 | 968 | PPC3 "phosphoenolpyruvate carb | 0.995 | 0.996 | 0.859 | 0.0 | |
| UNIPROTKB|Q9FV66 | 965 | PPCB "Phosphoenolpyruvate carb | 0.994 | 0.998 | 0.861 | 0.0 | |
| TAIR|locus:2041529 | 963 | PPC2 "phosphoenolpyruvate carb | 0.993 | 1.0 | 0.836 | 0.0 | |
| UNIPROTKB|P30694 | 966 | PPCA "C4 phosphoenolpyruvate c | 0.995 | 0.998 | 0.833 | 0.0 | |
| TAIR|locus:2012448 | 1032 | PPC4 "phosphoenolpyruvate carb | 0.567 | 0.532 | 0.466 | 5.4e-186 | |
| UNIPROTKB|P00864 | 883 | ppc "Ppc" [Escherichia coli K- | 0.558 | 0.612 | 0.452 | 1.7e-172 | |
| DICTYBASE|DDB_G0287723 | 931 | DDB_G0287723 "Phosphoenolpyruv | 0.888 | 0.924 | 0.370 | 2.8e-165 | |
| TIGR_CMR|SO_0274 | 881 | SO_0274 "phosphoenolpyruvate c | 0.577 | 0.635 | 0.423 | 1.1e-163 |
| UNIPROTKB|Q9FV65 PPCC "Phosphoenolpyruvate carboxylase 2" [Flaveria trinervia (taxid:4227)] | Back alignment and assigned GO terms |
|---|
Score = 4419 (1560.6 bits), Expect = 0., P = 0.
Identities = 846/968 (87%), Positives = 894/968 (92%)
Query: 3 ANRNLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQECY 62
ANRNLEK+ASIDAQLRLLVP KVSEDDKLIEYDALLLD+FLDILQDLHGE LKETVQECY
Sbjct: 2 ANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEGLKETVQECY 61
Query: 63 ELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRIKK 122
EL+AEYEGK+DP K +ELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEE+QIA+RRRIK
Sbjct: 62 ELSAEYEGKHDPKKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIK- 120
Query: 123 LKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVRRS 182
LKKGDFADE SATTESDIEETFK+LV +L KSPEE+FDALKNQTVDLV TAHPTQSVRRS
Sbjct: 121 LKKGDFADEASATTESDIEETFKKLVHKLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180
Query: 183 LLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGM 242
LLQKH RIR+CLAQLYAKDITPDDKQELDEAL REIQAAFRTDEIRRT PTPQDEMRAGM
Sbjct: 181 LLQKHGRIRDCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTPPTPQDEMRAGM 240
Query: 243 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 302
SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR
Sbjct: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 300
Query: 303 DVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSS-KKDAKHYIEFWKQI 361
DVCLLARMMAAN+Y+SQIEDLMFEMSMWRCSDELR RA+ LHRSS K+D KHYIEFWKQ+
Sbjct: 301 DVCLLARMMAANMYFSQIEDLMFEMSMWRCSDELRVRAEELHRSSSKRDVKHYIEFWKQV 360
Query: 362 PPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLCS 421
PP EPYRVILGDVRDKLY TRER R LLAH +SDIPEE+V+TNVEQFLEPLELCYRSLC+
Sbjct: 361 PPTEPYRVILGDVRDKLYNTRERARHLLAHDVSDIPEESVYTNVEQFLEPLELCYRSLCA 420
Query: 422 CGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEEK 481
CGDR IADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDV+DAIT+HLEIGSYREWSEEK
Sbjct: 421 CGDRVIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITQHLEIGSYREWSEEK 480
Query: 482 RQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLA 541
RQEWLLSELSGKRPLFGPDLPKTEEIADVL+TFHV+AELPAD FGAYIISMAT+PSDVLA
Sbjct: 481 RQEWLLSELSGKRPLFGPDLPKTEEIADVLDTFHVLAELPADCFGAYIISMATSPSDVLA 540
Query: 542 VELLQRECHVKQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGKQEVMIGYSDSG 601
VELLQRECHVKQPLRVVPLFEK FS++WY+NRI+GKQEVMIGYSDSG
Sbjct: 541 VELLQRECHVKQPLRVVPLFEKLADLEAAPAAVARLFSIEWYKNRIDGKQEVMIGYSDSG 600
Query: 602 KDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIH 661
KDAGR SAAWQLYKAQEELI VAK++G+KLTMFH PTHLAILSQPP+TIH
Sbjct: 601 KDAGRLSAAWQLYKAQEELINVAKKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIH 660
Query: 662 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIAT 721
GSLRVTVQGEVIEQSFGEEHLCFRTLQRF AATLEHGM PPISP+PEWR +MDEMAV AT
Sbjct: 661 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRALMDEMAVYAT 720
Query: 722 EEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 781
E+YR IVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR
Sbjct: 721 EQYREIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 780
Query: 782 FHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALYD 841
FHLPVWLGFGAAFK+ I+KDI+NLHMLQEMY WPFFRVTIDLVEMVFAKG+ IAAL D
Sbjct: 781 FHLPVWLGFGAAFKYAIEKDIKNLHMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALND 840
Query: 842 QLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVCQ 901
+LLVS+DLWSFGE LR NYEETK LLL+IAGHKDLLEGDPYL+QRLRLRD+YITTLNVCQ
Sbjct: 841 KLLVSEDLWSFGESLRANYEETKNLLLKIAGHKDLLEGDPYLRQRLRLRDSYITTLNVCQ 900
Query: 902 AYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGI 961
AYTLKRIRDPNYHV RPHIS+E E S KPADE +KLN SEYAPGLEDTLILTMKGI
Sbjct: 901 AYTLKRIRDPNYHVTFRPHISKEYSEPSS-KPADEYIKLNPKSEYAPGLEDTLILTMKGI 959
Query: 962 AAGLQNTG 969
AAG+QNTG
Sbjct: 960 AAGMQNTG 967
|
|
| TAIR|locus:2009600 PPC1 "phosphoenolpyruvate carboxylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086315 PPC3 "phosphoenolpyruvate carboxylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9FV66 PPCB "Phosphoenolpyruvate carboxylase 1" [Flaveria trinervia (taxid:4227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041529 PPC2 "phosphoenolpyruvate carboxylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P30694 PPCA "C4 phosphoenolpyruvate carboxylase" [Flaveria trinervia (taxid:4227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2012448 PPC4 "phosphoenolpyruvate carboxylase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P00864 ppc "Ppc" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0287723 DDB_G0287723 "Phosphoenolpyruvate carboxylase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SO_0274 SO_0274 "phosphoenolpyruvate carboxylase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A6VUQ5 | CAPP_MARMS | 4, ., 1, ., 1, ., 3, 1 | 0.3987 | 0.8906 | 0.9851 | yes | no |
| Q6LVH1 | CAPP_PHOPR | 4, ., 1, ., 1, ., 3, 1 | 0.4027 | 0.8730 | 0.9657 | yes | no |
| P27154 | CAPP_TOBAC | 4, ., 1, ., 1, ., 3, 1 | 0.8862 | 0.9938 | 0.9989 | N/A | no |
| P10490 | CAPP1_MESCR | 4, ., 1, ., 1, ., 3, 1 | 0.8215 | 0.9927 | 0.9958 | N/A | no |
| Q1R3V5 | CAPP_ECOUT | 4, ., 1, ., 1, ., 3, 1 | 0.4094 | 0.8885 | 0.9750 | yes | no |
| Q9AU12 | CAPP_PHAVU | 4, ., 1, ., 1, ., 3, 1 | 0.8721 | 0.9948 | 0.9958 | N/A | no |
| Q02735 | CAPP_MEDSA | 4, ., 1, ., 1, ., 3, 1 | 0.8679 | 0.9938 | 0.9968 | N/A | no |
| Q83IS7 | CAPP_SHIFL | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| A1AID4 | CAPP_ECOK1 | 4, ., 1, ., 1, ., 3, 1 | 0.4094 | 0.8885 | 0.9750 | yes | no |
| B7MR83 | CAPP_ECO81 | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| B5FBP8 | CAPP_VIBFM | 4, ., 1, ., 1, ., 3, 1 | 0.4023 | 0.8823 | 0.9760 | yes | no |
| B5XZ20 | CAPP_KLEP3 | 4, ., 1, ., 1, ., 3, 1 | 0.4030 | 0.8885 | 0.9750 | yes | no |
| Q5GM68 | CAPP2_ARATH | 4, ., 1, ., 1, ., 3, 1 | 0.8603 | 0.9927 | 0.9989 | no | no |
| P29193 | CAPP1_SACHY | 4, ., 1, ., 1, ., 3, 1 | 0.8636 | 0.9948 | 0.9979 | N/A | no |
| B1XBC1 | CAPP_ECODH | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| P29195 | CAPP1_SORBI | 4, ., 1, ., 1, ., 3, 1 | 0.8504 | 0.9876 | 0.9968 | N/A | no |
| P29194 | CAPP2_SORBI | 4, ., 1, ., 1, ., 3, 1 | 0.8878 | 0.9907 | 1.0 | N/A | no |
| Q6DAR6 | CAPP_ERWCT | 4, ., 1, ., 1, ., 3, 1 | 0.4103 | 0.8864 | 0.9772 | yes | no |
| P29196 | CAPP_SOLTU | 4, ., 1, ., 1, ., 3, 1 | 0.8872 | 0.9948 | 0.9989 | N/A | no |
| C6DI86 | CAPP_PECCP | 4, ., 1, ., 1, ., 3, 1 | 0.4082 | 0.8864 | 0.9772 | yes | no |
| P16097 | CAPP2_MESCR | 4, ., 1, ., 1, ., 3, 1 | 0.8802 | 0.9907 | 1.0 | N/A | no |
| Q6F6Q6 | CAPP_ACIAD | 4, ., 1, ., 1, ., 3, 1 | 0.4081 | 0.9081 | 0.9843 | yes | no |
| Q9FV66 | CAPPB_FLATR | 4, ., 1, ., 1, ., 3, 1 | 0.8862 | 0.9948 | 0.9989 | N/A | no |
| C5A0C2 | CAPP_ECOBW | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| B2TWF1 | CAPP_SHIB3 | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| Q9FV65 | CAPPC_FLATR | 4, ., 1, ., 1, ., 3, 1 | 0.8987 | 0.9958 | 0.9979 | N/A | no |
| B7MI92 | CAPP_ECO45 | 4, ., 1, ., 1, ., 3, 1 | 0.4094 | 0.8885 | 0.9750 | yes | no |
| Q84VW9 | CAPP3_ARATH | 4, ., 1, ., 1, ., 3, 1 | 0.8844 | 0.9958 | 0.9969 | yes | no |
| B7LUN9 | CAPP_ESCF3 | 4, ., 1, ., 1, ., 3, 1 | 0.4045 | 0.8895 | 0.9762 | yes | no |
| Q02909 | CAPP1_SOYBN | 4, ., 1, ., 1, ., 3, 1 | 0.8988 | 0.9948 | 0.9968 | yes | no |
| P15804 | CAPP3_SORBI | 4, ., 1, ., 1, ., 3, 1 | 0.7551 | 0.9855 | 0.9947 | N/A | no |
| P51062 | CAPP_PEA | 4, ., 1, ., 1, ., 3, 1 | 0.8597 | 0.9938 | 0.9958 | N/A | no |
| P51063 | CAPP_PICAB | 4, ., 1, ., 1, ., 3, 1 | 0.8697 | 0.9927 | 0.9989 | N/A | no |
| P51061 | CAPP2_SOYBN | 4, ., 1, ., 1, ., 3, 1 | 0.8761 | 0.9948 | 0.9968 | no | no |
| A4SIM0 | CAPP_AERS4 | 4, ., 1, ., 1, ., 3, 1 | 0.4075 | 0.8813 | 0.9737 | yes | no |
| Q43299 | CAPP_AMAHP | 4, ., 1, ., 1, ., 3, 1 | 0.8004 | 0.9938 | 0.9989 | N/A | no |
| Q9MAH0 | CAPP1_ARATH | 4, ., 1, ., 1, ., 3, 1 | 0.8853 | 0.9958 | 0.9979 | no | no |
| B5Z058 | CAPP_ECO5E | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| A4XXP6 | CAPP_PSEMY | 4, ., 1, ., 1, ., 3, 1 | 0.4125 | 0.9060 | 1.0 | yes | no |
| A1U2U4 | CAPP_MARAV | 4, ., 1, ., 1, ., 3, 1 | 0.4186 | 0.8864 | 0.9750 | yes | no |
| Q01647 | CAPP1_FLAPR | 4, ., 1, ., 1, ., 3, 1 | 0.8832 | 0.9958 | 0.9979 | N/A | no |
| P04711 | CAPP1_MAIZE | 4, ., 1, ., 1, ., 3, 1 | 0.7850 | 0.9896 | 0.9886 | N/A | no |
| A0KFU8 | CAPP_AERHH | 4, ., 1, ., 1, ., 3, 1 | 0.4086 | 0.8813 | 0.9737 | yes | no |
| C4L7S3 | CAPP_TOLAT | 4, ., 1, ., 1, ., 3, 1 | 0.4136 | 0.8751 | 0.9669 | yes | no |
| P30694 | CAPPA_FLATR | 4, ., 1, ., 1, ., 3, 1 | 0.8572 | 0.9958 | 0.9989 | N/A | no |
| B7UNT2 | CAPP_ECO27 | 4, ., 1, ., 1, ., 3, 1 | 0.4084 | 0.8885 | 0.9750 | yes | no |
| P51059 | CAPP2_MAIZE | 4, ., 1, ., 1, ., 3, 1 | 0.8770 | 0.9958 | 0.9979 | N/A | no |
| Q5E2E3 | CAPP_VIBF1 | 4, ., 1, ., 1, ., 3, 1 | 0.4012 | 0.8823 | 0.9760 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.1.31 | 0.994 |
| 3rd Layer | 4.1.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 969 | |||
| pfam00311 | 794 | pfam00311, PEPcase, Phosphoenolpyruvate carboxylas | 0.0 | |
| PRK00009 | 911 | PRK00009, PRK00009, phosphoenolpyruvate carboxylas | 0.0 | |
| COG2352 | 910 | COG2352, Ppc, Phosphoenolpyruvate carboxylase [Ene | 0.0 | |
| PTZ00398 | 974 | PTZ00398, PTZ00398, phosphoenolpyruvate carboxylas | 0.0 |
| >gnl|CDD|215852 pfam00311, PEPcase, Phosphoenolpyruvate carboxylase | Back alignment and domain information |
|---|
Score = 1183 bits (3064), Expect = 0.0
Identities = 395/826 (47%), Positives = 518/826 (62%), Gaps = 52/826 (6%)
Query: 164 NQTVDLVLTAHPTQSVRRSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFR 223
+ LV TAHPT+ VRR++L K RI LAQL D+TP ++QELDE L+ EI+ ++
Sbjct: 1 ELDIRLVFTAHPTEIVRRTILDKQRRIAELLAQLDDADLTPRERQELDEQLREEIRLLWQ 60
Query: 224 TDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFS 283
TDE+R+ +PT DE+R G+SYF ET++ +P+ RR+D ALK R+P ++F
Sbjct: 61 TDELRQFKPTVLDEVRNGLSYFEETLFDALPQLYRRLDRALKESFPGLRLPLPNF-LRFG 119
Query: 284 SWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFEMSM----WRCSDELRHR 339
SW+GGDRDGNP VT EVT + LL R +A LY +E L FE+SM S EL
Sbjct: 120 SWIGGDRDGNPNVTAEVTWETLLLQRELALELYLKSVEALRFELSMSLRWSDVSPELLAS 179
Query: 340 ADVLHRSSKKDAKHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEE 399
+ R ++ + Y E + EPYR+ L +R +L TRER+ LLA ++P
Sbjct: 180 LE---RDREQLPEVYEE-LAERYRQEPYRLKLAYIRARLENTRERLAALLAGR--ELPPG 233
Query: 400 AVFTNVEQFLEPLELCYRSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHT 459
+T+ E+ LE LEL YRSL G +ADG LLD +RQV FG L LDIRQES RH
Sbjct: 234 EAYTSAEELLEDLELIYRSLRETGGGLLADGRLLDLIRQVEVFGFHLATLDIRQESTRHE 293
Query: 460 DVIDAITKHLEI-GSYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIA 518
D + IT++L + G Y E SEE+RQ WLL EL +RPL PDLP +EE +VL+TF VIA
Sbjct: 294 DALAEITRYLGLPGDYAELSEEERQAWLLRELETRRPLIPPDLPFSEETREVLDTFRVIA 353
Query: 519 ELPA----DNFGAYIISMATAPSDVLAVELLQRECHVKQP------LRVVPLFEKLADLE 568
L + G YIISMA SDVL V LL +E + P LRVVPLFE + DL
Sbjct: 354 RLQQEFGPEAIGTYIISMAHTASDVLEVLLLAKEAGLLDPATGRSTLRVVPLFETIEDLR 413
Query: 569 AAPAALARLFSVDWYRNRING---KQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAK 625
AP + +LFS+ WYR + G QEVM+GYSDS KD G ++ W+LYKAQE L+KVA+
Sbjct: 414 NAPEIMRQLFSLPWYRELLAGRGDLQEVMLGYSDSNKDGGFLTSNWELYKAQEALVKVAE 473
Query: 626 QYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFR 685
+YG+KL +FHGRGG+VGRGGGP + AIL+QPP T++G +R+T QGEVI +G L R
Sbjct: 474 KYGVKLRLFHGRGGSVGRGGGPAYEAILAQPPGTLNGRIRITEQGEVIASKYGLPELALR 533
Query: 686 TLQRFTAATLEHGMRPPISPK-PEWRTMMDEMAVIATEEYRSIVFKEPRFVEYFRLATPE 744
L+ +TAA LE + PP PK PEWR +M+E++ + + YR++V++ P FV+YFR ATP
Sbjct: 534 NLELYTAAVLEASLLPPPPPKIPEWREIMEELSERSRKAYRALVYETPDFVDYFRQATPI 593
Query: 745 LEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIRN 804
E G++NIGSRP++RK SGGIESLRAIPW+F+WTQ+RF LP W G G A + +QKD N
Sbjct: 594 QEIGKLNIGSRPARRKGSGGIESLRAIPWVFSWTQSRFLLPAWYGVGTALQAFLQKDPGN 653
Query: 805 LHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALYDQLLVSKDL-WSFGEKLRVNYEET 863
L +L+EMY WPFFR I VEMV AK + +IA Y QLLV +L E++R YE T
Sbjct: 654 LKLLREMYREWPFFRTLISNVEMVLAKADLQIARHYVQLLVDPELRERLFEQIRAEYELT 713
Query: 864 KGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKRIRDPNYHVKVRPHISR 923
+ L+L+I G K+LL+ +P L++ +RLR+ YI LN Q LKR+R N S
Sbjct: 714 RELVLKITGQKELLDDNPVLQRSIRLRNPYIDPLNYLQVELLKRLRQAN-----EQGPST 768
Query: 924 EIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGIAAGLQNTG 969
L D LILT+ GIAAG++NTG
Sbjct: 769 Y--------------------SRDELLRDALILTINGIAAGMRNTG 794
|
Length = 794 |
| >gnl|CDD|234570 PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|225227 COG2352, Ppc, Phosphoenolpyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|173589 PTZ00398, PTZ00398, phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 969 | |||
| COG2352 | 910 | Ppc Phosphoenolpyruvate carboxylase [Energy produc | 100.0 | |
| PRK00009 | 911 | phosphoenolpyruvate carboxylase; Reviewed | 100.0 | |
| PTZ00398 | 974 | phosphoenolpyruvate carboxylase; Provisional | 100.0 | |
| PF00311 | 794 | PEPcase: Phosphoenolpyruvate carboxylase; InterPro | 100.0 | |
| PRK13655 | 494 | phosphoenolpyruvate carboxylase; Provisional | 100.0 | |
| TIGR02751 | 506 | PEPCase_arch phosphoenolpyruvate carboxylase, arch | 100.0 | |
| PF14010 | 491 | PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 | 99.41 | |
| COG1892 | 488 | Phosphoenolpyruvate carboxylase [Carbohydrate tran | 98.83 | |
| PF03328 | 221 | HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family | 96.27 | |
| PRK10558 | 256 | alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro | 95.51 | |
| TIGR03239 | 249 | GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co | 94.76 | |
| TIGR01064 | 473 | pyruv_kin pyruvate kinase. This enzyme is a homote | 93.88 | |
| PRK09206 | 470 | pyruvate kinase; Provisional | 90.26 | |
| PLN02623 | 581 | pyruvate kinase | 89.93 | |
| PRK08187 | 493 | pyruvate kinase; Validated | 89.83 | |
| PRK05826 | 465 | pyruvate kinase; Provisional | 89.04 | |
| PTZ00300 | 454 | pyruvate kinase; Provisional | 88.71 | |
| cd00288 | 480 | Pyruvate_Kinase Pyruvate kinase (PK): Large allost | 87.07 | |
| PRK06247 | 476 | pyruvate kinase; Provisional | 86.93 | |
| TIGR01588 | 288 | citE citrate lyase, beta subunit. This is a model | 86.68 | |
| PRK06354 | 590 | pyruvate kinase; Provisional | 86.24 | |
| TIGR02311 | 249 | HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola | 84.73 |
| >COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-265 Score=2268.51 Aligned_cols=886 Identities=43% Similarity=0.728 Sum_probs=831.0
Q ss_pred chhhhHHHHHHHHHHH-HHHHHhcChhHHHHHHHHHHHHHhhhCCCCchhHHHHHHHHcCCChhhHHHHHHHHHHHhhhh
Q 002089 28 DDKLIEYDALLLDRFL-DILQDLHGEDLKETVQECYELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLA 106 (969)
Q Consensus 28 ~~~~l~~~~~ll~~ll-~vl~e~~G~~~~~~ve~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~yf~L~ 106 (969)
.+..++.|+.+||.+| ++|+++.|+++|++||+||+++++.|.+ +..+++.|.+.+.+|+.+++..|+||||+|++|+
T Consensus 5 ~~~~lr~~v~~Lg~lLge~i~e~~g~~~~e~ve~ir~~s~~~r~~-~~~~~~~L~~~l~~Ls~~~~~~vaRaFs~f~~L~ 83 (910)
T COG2352 5 KYSALRSDVSMLGRLLGETIREAEGEAILELVETIRKLSKESRAG-DQADRQELEATLANLSNDEAIPVARAFSQFLLLA 83 (910)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-chhhHHHHHHHHcCCCHhhhhHHHHHHHHHhhhh
Confidence 5678999999999998 9999999999999999999999988876 4567889999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhhcCCCcccCCCCCcccHHHHHHHHHHhcCCCHHHHHHHhhcCceeEeeccCCCcchhhhHHHH
Q 002089 107 NLAEELQIAHRRRIKKLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVRRSLLQK 186 (969)
Q Consensus 107 NiAEe~~r~r~~R~~~~~~~~~~~~~~~~~~gs~~~~l~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrtvL~~ 186 (969)
||||+.|+.++++. +...+ ...||+..++.+| ++.|++++++.++|+++.|+|||||||||++||||++|
T Consensus 84 NiaEd~~~~~r~~~-~~~~~--------~~~~sL~~~~~~L-k~~~~~~~~v~~~l~~l~v~lVLTAHPTEv~RrTv~~~ 153 (910)
T COG2352 84 NIAEDYHRIRRRQI-HEAAG--------DSDGSLAATLKKL-KEQGLSPETVARALENLNVELVLTAHPTEVQRRTVIDK 153 (910)
T ss_pred hHHHHhhhHhhhhh-hhccC--------CCcchHHHHHHHH-HhcCCCHHHHHHHHHhCceeEEEecCchHHHHHHHHHH
Confidence 99999999876653 32222 2349999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhcchhhhccCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Q 002089 187 HARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKN 266 (969)
Q Consensus 187 ~~~I~~~L~~~d~~~~~~~e~~~~~~~L~~~I~~LW~T~eiR~~KPtv~DE~~~gl~y~~~sl~~avP~~~~~l~~al~~ 266 (969)
+++|.++|.+++...+++. +++++++|++.|..+||||+||..||||.|||+||++||++|||++||+++++++.++++
T Consensus 154 ~~~I~~lL~~~~~~~~~~~-~~~~~~~L~~~I~~~W~TdeiR~~rptv~DEi~~gl~y~~~sl~~avP~l~r~~~~~~~~ 232 (910)
T COG2352 154 QREINRLLRKLDHADLSDE-RARIRRRLRRLIAQLWQTDEIRKLRPTVLDEIKNGLAYYENSLWQAVPKLLRELNEALQE 232 (910)
T ss_pred HHHHHHHHHHhhcccchhH-HHHHHHHHHHHHHHHhhhhHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988777766 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCccccCcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----ccCCHHHHHhHHH
Q 002089 267 IGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFEMSM----WRCSDELRHRADV 342 (969)
Q Consensus 267 ~~~~~~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~l~~~r~~al~~Y~~~l~~L~~~LS~----~~~s~~l~~~~~~ 342 (969)
+++ ...|..++|++|||||||||||||||||+||++++..+|++|+++|.++|.+|+.+||| ++||++|+++++.
T Consensus 233 ~~~-~~~~~~~~p~~~gSWiGGDRDGNPfVTae~tr~~~~~~r~~~~~~Yl~~i~~L~~eLS~S~~~~~vs~el~ala~~ 311 (910)
T COG2352 233 TFG-ELLPVEAVPLRFGSWIGGDRDGNPFVTAETTRQALLLQRWKALDLYLKEIQKLYSELSMSTRLVKVSPELLALAGE 311 (910)
T ss_pred hcc-cccCCCCCccccccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhcccCCHHHHHHHhc
Confidence 864 34566678999999999999999999999999999999999999999999999999999 6899999997765
Q ss_pred hhhhhhhhhhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccCCCCChHHhhhHHHHHHHHHHhc
Q 002089 343 LHRSSKKDAKHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLCSC 422 (969)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~SL~~~ 422 (969)
.. +...+ +.+||||++|.+|+.||.+|..++.+...+.. ......+|.+++||++||..|++||.+|
T Consensus 312 ~~----d~~~~--------r~~EPYR~al~~i~~rL~~T~~~l~~~~~~~~-~~~~~~~y~~~~el~~dL~~i~~SL~~~ 378 (910)
T COG2352 312 SQ----DQSIR--------RADEPYRRALKYIRSRLMATQAYLDGLLAGEE-GVGPEPPYTSPEELLEDLYAIYQSLHAC 378 (910)
T ss_pred Cc----cccch--------hccccHHHHHHHHHHHHHHHHHHHhccccccc-cCCCCcccCCHHHHHHHHHHHHHHHHhc
Confidence 22 11111 45899999999999999999998766543221 2233558999999999999999999999
Q ss_pred CCccchhhHHHHHHHHHHHhCCccccccccccchHHHHHHHHHHHhcCCC-CCCCCCHHHHHHHHHhHhcCCCCCCCCCC
Q 002089 423 GDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIG-SYREWSEEKRQEWLLSELSGKRPLFGPDL 501 (969)
Q Consensus 423 ~~~~~a~~~L~~lir~v~~FGfhla~LDiRQ~S~~H~~al~ei~~~~g~~-~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~ 501 (969)
|++.+|+|.|.+++++|++|||||++|||||||++|++||+||++++|++ +|.+|+|++|++||.+||.++|||+++.+
T Consensus 379 G~~~la~g~L~~ll~~v~~FGf~L~~LDiRQ~S~~h~~avaEL~~~ag~~~dY~~lsE~~K~~~L~~EL~s~RPL~p~~~ 458 (910)
T COG2352 379 GMEILADGRLLDLLRRVEVFGFHLVSLDIRQESTRHEEAVAELLRYAGLGADYSSLSEEDKQAFLLRELSSRRPLLPPFW 458 (910)
T ss_pred CCceeccchHHHHHHHHHhcCceeeccccccccchHHHHHHHHHHHccCCCChhhcCHHHHHHHHHHHhcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhC----CCCchhhHHhhcCCChhhHHHHHHHHHHcCCC----CCCccccccCChHHHhcHHHH
Q 002089 502 PKTEEIADVLETFHVIAEL----PADNFGAYIISMATAPSDVLAVELLQRECHVK----QPLRVVPLFEKLADLEAAPAA 573 (969)
Q Consensus 502 ~~s~~~~e~l~~f~~i~~~----~~~a~~~yIISmt~sasDvL~V~lL~ke~Gl~----~~l~VvPLFETi~DL~~a~~i 573 (969)
++|+.|+++|+||++++++ |.++|++||||||+++||||||++|+||+|+. .+++|||||||||||+||+.|
T Consensus 459 ~~Se~t~~~L~t~r~a~~~~~~~G~~~i~~yIISma~s~SDvLev~lLlKE~Gl~~~~~~~v~VvPLFETieDL~na~~v 538 (910)
T COG2352 459 QPSEETREELATFRVAAEAKDEFGEDAIGAYIISMAESVSDVLEVLLLLKEAGLVDPERARVPVVPLFETIEDLDNAPDV 538 (910)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccCCHHHHHHHHHHHHHhCCCCccCCccccccccccHHHHhccHHH
Confidence 9999999999999999976 56789999999999999999999999999997 789999999999999999999
Q ss_pred HHHHhhcHHHHhhc---cCeeEEEEeeccCCcchhHHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcchhh
Q 002089 574 LARLFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHL 650 (969)
Q Consensus 574 m~~ll~~p~yr~~l---~~~QeVMlGYSDS~KDgG~las~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~ 650 (969)
|++||+.|+||+.| +|.||||||||||||||||+||||++|+||++|+++|+++||+++|||||||||||||||+|.
T Consensus 539 m~~ll~l~~yR~~l~~~~n~QEVMlGYSDSnKDgG~laa~Wa~y~Aq~aLv~~~~~~gV~LrlFHGRGGtVGRGGGPa~~ 618 (910)
T COG2352 539 MTQLLNLPLYRALLAGRGNVQEVMLGYSDSNKDGGYLAANWALYKAQLALVELCEKAGVELRLFHGRGGSVGRGGGPAYA 618 (910)
T ss_pred HHHHHcChHHHHHHcCCCCceEEEecccccccccchhhhHHHHHHHHHHHHHHHHHhCceEEEEccCCCCCCCCCchHHH
Confidence 99999999999999 359999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCcccCceeeecchhHHHhhhCChhHHHHHHHHHHHHHHHccCCCC-CCCChhHHHHHHHHHHHHHHHHHHhhh
Q 002089 651 AILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPP-ISPKPEWRTMMDEMAVIATEEYRSIVF 729 (969)
Q Consensus 651 ailaqP~gsv~g~irvTEQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~-~~~~~~~~~~m~~ls~~s~~aYr~lv~ 729 (969)
||+|||||||+|+||+|||||||+.|||+|++|.||||.+++|+|++++.|+ +.|+++|+.+||++|+.||++||+||+
T Consensus 619 AILsQP~gsv~g~iRiTEQGE~I~~Kyg~p~~A~~nLe~l~sAvLeAsllp~~~dp~~~~~~iMd~ls~~S~~~YR~lV~ 698 (910)
T COG2352 619 AILSQPPGSVKGRIRITEQGEMIAFKYGLPEVARRNLETLVSAVLEASLLPPKPDPKESWRAIMDELSDISCDAYRGLVR 698 (910)
T ss_pred HHhcCCCcccCCceEeehhHHHHHHhhCChHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999976 577788999999999999999999999
Q ss_pred cCCchhHHHHhhCchhHhhhCCCCCCCCccCCC-CCCCCccccchhhhhhhhcccccchhhHHHHHHHHHHhCcCcHHHH
Q 002089 730 KEPRFVEYFRLATPELEYGRMNIGSRPSKRKPS-GGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIRNLHML 808 (969)
Q Consensus 730 ~~p~F~~yF~~aTPi~ei~~lnIGSRPakR~~~-~~ledLRAIPWVFaWtQ~R~~lPgWyGvGsAL~~~~~~~~~~~~~L 808 (969)
++|+|++||+++|||.||++||||||||||+.. ++++|||||||||||||+|+|||||||+|+|++.+++++|++++.|
T Consensus 699 ~~pdFvdyF~~~TPi~EIs~LniGSRPA~Rk~~~~~ie~LRAIPWVFSWsQnR~mLP~WyG~Gsal~~~i~~g~~~~~~L 778 (910)
T COG2352 699 ENPDFVDYFRQATPIQEISKLNIGSRPASRKPTTGGIESLRAIPWVFSWTQNRLMLPAWYGVGSALQRFIEEGPENLALL 778 (910)
T ss_pred CCCcHHHHHHhcCcHHHHhcCCCCCCCcCCCCCCCccccccccchhhhhhhhhhcchhhhhhhHHHHHHHHcCcchHHHH
Confidence 999999999999999999999999999999987 5599999999999999999999999999999999999998889999
Q ss_pred HHHHhhCchHHHHHHHHHHHHHhccHHHHHHHHhccCChhhH-HHHHHHHHHHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 002089 809 QEMYNNWPFFRVTIDLVEMVFAKGNHKIAALYDQLLVSKDLW-SFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRL 887 (969)
Q Consensus 809 ~~my~~wpfF~~~ldn~em~LaKaD~~Ia~~Y~~l~~d~~~~-~i~~~I~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si 887 (969)
++||++||||+++|+||+|||+|+||.||.+|+++++|+++. ++|+.|++||+.|++.++.|+|+++||+++|+|++||
T Consensus 779 ~~m~~~WPFF~s~Lsn~emvlaKsd~~iA~~Y~qll~d~~~~~~lf~~i~~e~~~T~~~vl~I~~~~~LL~d~p~La~Si 858 (910)
T COG2352 779 RDMYQNWPFFSSRLSNMEMVLAKSDLWLAEHYAQLLVDPELGERLFDQIREEYQLTRKVVLAITGHDELLADNPWLAESI 858 (910)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhhcCCHHHHHHH
Confidence 999999999999999999999999999999999999999954 8999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhHHHHHHHHHHhcCCCCCCcccCcchhhhhhcccCCchhHHhhhccCCCCCcchHHHHHHHHHHHHhhhcc
Q 002089 888 RLRDAYITTLNVCQAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGIAAGLQN 967 (969)
Q Consensus 888 ~~R~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lllTIngIAAGlrN 967 (969)
.+||||+||||++|||||||+|+.+. . + .++.++++|++|||||||||||
T Consensus 859 ~lRn~Y~dPLn~LQvELLkR~R~~~~----------~--~------------------~~~~~er~i~lTInGIAaGlRN 908 (910)
T COG2352 859 ALRNPYLDPLNVLQVELLKRSRQSKR----------G--D------------------PDPEVERALLLTINGIAAGLRN 908 (910)
T ss_pred HHhccccChhHHHHHHHHHHHhhccc----------C--C------------------CCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999996431 0 1 1367999999999999999999
Q ss_pred CC
Q 002089 968 TG 969 (969)
Q Consensus 968 TG 969 (969)
||
T Consensus 909 TG 910 (910)
T COG2352 909 TG 910 (910)
T ss_pred CC
Confidence 99
|
|
| >PRK00009 phosphoenolpyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00398 phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
| >PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] | Back alignment and domain information |
|---|
| >PRK13655 phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
| >TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type | Back alignment and domain information |
|---|
| >PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C | Back alignment and domain information |
|---|
| >COG1892 Phosphoenolpyruvate carboxylase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
| >PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 | Back alignment and domain information |
|---|
| >PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional | Back alignment and domain information |
|---|
| >TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase | Back alignment and domain information |
|---|
| >TIGR01064 pyruv_kin pyruvate kinase | Back alignment and domain information |
|---|
| >PRK09206 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02623 pyruvate kinase | Back alignment and domain information |
|---|
| >PRK08187 pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >PRK05826 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00300 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors | Back alignment and domain information |
|---|
| >PRK06247 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01588 citE citrate lyase, beta subunit | Back alignment and domain information |
|---|
| >PRK06354 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 969 | ||||
| 3zgb_A | 972 | Greater Efficiency Of Photosynthetic Carbon Fixatio | 0.0 | ||
| 3zge_A | 990 | Greater Efficiency Of Photosynthetic Carbon Fixatio | 0.0 | ||
| 1jqo_A | 970 | Crystal Structure Of C4-Form Phosphoenolpyruvate Ca | 0.0 | ||
| 1qb4_A | 883 | Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruva | 0.0 |
| >pdb|3ZGB|A Chain A, Greater Efficiency Of Photosynthetic Carbon Fixation Due To Single Amino Acid Substitution Length = 972 | Back alignment and structure |
|
| >pdb|3ZGE|A Chain A, Greater Efficiency Of Photosynthetic Carbon Fixation Due To Single Amino Acid Substitution Length = 990 | Back alignment and structure |
| >pdb|1JQO|A Chain A, Crystal Structure Of C4-Form Phosphoenolpyruvate Carboxylase From Maize Length = 970 | Back alignment and structure |
| >pdb|1QB4|A Chain A, Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruvate Carboxylase Length = 883 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Length = 970 | Back alignment and structure |
|---|
Score = 1326 bits (3434), Expect = 0.0
Identities = 753/969 (77%), Positives = 842/969 (86%), Gaps = 4/969 (0%)
Query: 2 AANRNLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEC 61
A EK SIDAQLR LVP KVSEDDKLIEYDALL+DRFL+ILQDLHG L+E VQEC
Sbjct: 5 KAPGPGEKHHSIDAQLRQLVPGKVSEDDKLIEYDALLVDRFLNILQDLHGPSLREFVQEC 64
Query: 62 YELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRIK 121
YE++A+YEGK D +K ELG LT L P D+I++A + HMLNLANLAEE+QIAHRRR
Sbjct: 65 YEVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEEVQIAHRRRNS 124
Query: 122 KLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVRR 181
KLKKG FADE SATTESDIEET KRLV E+ KSPEE+F+ALKNQTVDLV TAHPTQS RR
Sbjct: 125 KLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARR 184
Query: 182 SLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAG 241
SLLQK+ARIRNCL QL AKDIT DDKQELDEALQREIQAAFRTDEIRR QPTPQ EMR G
Sbjct: 185 SLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYG 244
Query: 242 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVT 301
MSY HET+WKGVPKFLRRVDTALKNIGINER+PYN LI+FSSWMGGDRDGNPRVTPEVT
Sbjct: 245 MSYIHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVT 304
Query: 302 RDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSSKKD-AKHYIEFWKQ 360
RDVCLLARMMAANLY QIE+LMFE+SMWRC+DELR RA+ LH SS K+YIEFWKQ
Sbjct: 305 RDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQ 364
Query: 361 IPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC 420
IPPNEPYRVILG VRDKLY TRER R LLA G+S+I E+ FT++E+FLEPLELCY+SLC
Sbjct: 365 IPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLC 424
Query: 421 SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEE 480
CGD+AIADGSLLD LRQV TFGLSLV+LDIRQES+RHTDVIDAIT HL IGSYREW E+
Sbjct: 425 DCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPED 484
Query: 481 KRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVL 540
KRQEWLLSEL GKRPL PDLP+T+EIADV+ FHV+AELP D+FG YIISMATAPSDVL
Sbjct: 485 KRQEWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVL 544
Query: 541 AVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDS 600
AVELLQREC V+QPL VVPLFE+LADL++APA++ RLFSVDWY +RI GKQ+VM+GYSDS
Sbjct: 545 AVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDS 604
Query: 601 GKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI 660
GKDAGR SAAWQLY+AQEE+ +VAK+YG+KLT+FHGRGGTVGRGGGPTHLAILSQPPDTI
Sbjct: 605 GKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTI 664
Query: 661 HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIA 720
+GS+RVTVQGEVIE FGEEHLCF+TLQRFTAATLEHGM PP+SPKPEWR +MDEMAV+A
Sbjct: 665 NGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVA 724
Query: 721 TEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQT 780
TEEYRS+V KE RFVEYFR ATPE EYGRMNIGSRP+KR+P GGI +LRAIPWIF+WTQT
Sbjct: 725 TEEYRSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQT 784
Query: 781 RFHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALY 840
RFHLPVWLG GAAFK I KD+RN +L+EMYN WPFFRVT+DL+EMVFAKG+ IA LY
Sbjct: 785 RFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLY 844
Query: 841 DQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVC 900
D+LLV+++L FG++LR Y ET+ LLLQIAGHKD+LEGDP+LKQ L LR+ YITTLNV
Sbjct: 845 DELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVF 904
Query: 901 QAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKG 960
QAYTLKRIRDPN+ V +P +S+E + LVKLN +SEY PGLEDTLILTMKG
Sbjct: 905 QAYTLKRIRDPNFKVTPQPPLSKEFADE---NKPAGLVKLNPASEYPPGLEDTLILTMKG 961
Query: 961 IAAGLQNTG 969
IAAG+QNTG
Sbjct: 962 IAAGMQNTG 970
|
| >1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Length = 883 | Back alignment and structure |
|---|
| >3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Length = 560 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 969 | |||
| 1jqo_A | 970 | Phosphoenolpyruvate carboxylase; beta barrel, carb | 100.0 | |
| 1jqn_A | 883 | Pepcase, PEPC, phosphoenolpyruvate carboxylase; be | 100.0 | |
| 3odm_A | 560 | Pepcase, PEPC, phosphoenolpyruvate carboxylase; be | 100.0 | |
| 1e0t_A | 470 | Pyruvate kinase, PK; phosphotransferase, glycolysi | 93.47 | |
| 3gr4_A | 550 | Pyruvate kinase isozymes M1/M2; activator, acetyla | 91.64 | |
| 1a3w_A | 500 | Pyruvate kinase; allosteric regulation, tranferase | 91.46 | |
| 1sgj_A | 284 | Citrate lyase, beta subunit; trimer, TIM barrel, s | 91.09 | |
| 1dxe_A | 256 | 2-dehydro-3-deoxy-galactarate aldolase; class II a | 90.81 | |
| 3qtg_A | 461 | Pyruvate kinase, PK; TIM barrel, glycolysis, trans | 90.49 | |
| 3khd_A | 520 | Pyruvate kinase; malaria, structural genomics, str | 89.54 | |
| 3hqn_D | 499 | Pyruvate kinase, PK; TIM barrel, T-state enzyme, t | 89.48 | |
| 3qll_A | 316 | Citrate lyase; beta barrel; 2.45A {Yersinia pestis | 89.26 | |
| 3gg8_A | 511 | Pyruvate kinase; malaria, genomics, proteomics, gl | 88.6 | |
| 3r4i_A | 339 | Citrate lyase; TIM beta/alpha-barrel, structural g | 88.1 | |
| 3qqw_A | 332 | Putative citrate lyase; TIM beta/alpha-barrel, str | 88.07 | |
| 2v5j_A | 287 | 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l | 86.48 | |
| 3qz6_A | 261 | HPCH/HPAI aldolase; structural genomics, PSI-biolo | 86.12 | |
| 3t05_A | 606 | Pyruvate kinase, PK; tetramer, glycolysis, transfe | 85.96 | |
| 2e28_A | 587 | Pyruvate kinase, PK; allosteric, transferase; 2.40 | 84.83 | |
| 1izc_A | 339 | Macrophomate synthase intermolecular diels-aldera; | 83.5 |
| >1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-261 Score=2336.36 Aligned_cols=959 Identities=77% Similarity=1.216 Sum_probs=843.8
Q ss_pred hhhhhhchHHHHhhccCCCCCCchhhhHHHHHHHHHHH-HHHHHhcChhHHHHHHHHHHHHHhhhCCCCchhHHHHHHHH
Q 002089 6 NLEKMASIDAQLRLLVPRKVSEDDKLIEYDALLLDRFL-DILQDLHGEDLKETVQECYELAAEYEGKNDPSKFKELGNVL 84 (969)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ll~~ll-~vl~e~~G~~~~~~ve~iR~la~~~~~~~~~~~~~~L~~~l 84 (969)
-.++|+++|++++++++++++.. .+|++|+++||.++ +||++++|+++|++||++|.+++.+++.+++...++|.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~-~~Lr~dv~lLg~lLg~vl~~~~g~~~~~~ve~ir~ls~~~~r~~~~~~~~~l~~~l 87 (970)
T 1jqo_A 9 PGEKHHSIDAQLRQLVPGKVSED-DKLIEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKL 87 (970)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHH
T ss_pred hHHHHHhhhHHhhcccCCCCCcc-HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHH
Confidence 35789999999999999999996 58999999999988 99999999999999999999999874433556788999999
Q ss_pred cCCChhhHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHhhhc-CCCcccCCCCCcccHHHHHHHHHHhcCCCHHHHHHHhh
Q 002089 85 TSLDPGDSIVIAKAFSHMLNLANLAEELQIAHRRRIKKLKK-GDFADENSATTESDIEETFKRLVGELNKSPEEIFDALK 163 (969)
Q Consensus 85 ~~L~~~~~~~vaRAFs~yf~L~NiAEe~~r~r~~R~~~~~~-~~~~~~~~~~~~gs~~~~l~~L~~~~g~~~e~i~~~L~ 163 (969)
.+|+++++..|+||||+||+|+|||||+|++|++|. .... ++..+.+..+.+|||..++.+|+++.|+++++|+++|+
T Consensus 88 ~~L~~~~~~~v~RAFs~~~~L~NiAEe~~~~r~~r~-~~~~~~~~~~~~~~~~~~sl~~~~~~L~~~~g~~~~~i~~~L~ 166 (970)
T 1jqo_A 88 TGLAPADAILVASSILHMLNLANLAEEVQIAHRRRN-SKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALK 166 (970)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-----------------CHHHHHHHHHTTSCCCHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhcccccccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 999999999999999999999999999999988775 2222 33322222346799999999984588999999999999
Q ss_pred cCceeEeeccCCCcchhhhHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhcchhhhccCCChHHHHHHHHH
Q 002089 164 NQTVDLVLTAHPTQSVRRSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGMS 243 (969)
Q Consensus 164 ~~~i~pVlTAHPTEa~RrtvL~~~~~I~~~L~~~d~~~~~~~e~~~~~~~L~~~I~~LW~T~eiR~~KPtv~DE~~~gl~ 243 (969)
++.|+|||||||||++|||||+||++|+++|.++++.++++.|+++++++|+++|++||||||||+.||||.||++|||+
T Consensus 167 ~~~v~pVlTAHPTE~~RrTvl~k~~~I~~lL~~l~~~~lt~~e~~~~~~~L~~~I~~lW~TdeiR~~kPtv~DE~~~gl~ 246 (970)
T 1jqo_A 167 NQTVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMS 246 (970)
T ss_dssp TCEEEEEEECCTTCCSCHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHH
T ss_pred cCceeeeeccCCccccHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhCChhhhccCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHhcCCCCCCCCCCCccccCcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002089 244 YFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDL 323 (969)
Q Consensus 244 y~~~sl~~avP~~~~~l~~al~~~~~~~~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~l~~~r~~al~~Y~~~l~~L 323 (969)
||++|||++||.+|++++++|.+++.+..+|...++|+|||||||||||||||||+||++|+.++|++|+++|++++++|
T Consensus 247 y~~~sl~~avP~~~r~l~~al~~~~~~~~l~~~~~~i~fGSWiGGDRDGNP~VTaevT~~~~~~~r~~al~~Y~~~l~~L 326 (970)
T 1jqo_A 247 YIHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEEL 326 (970)
T ss_dssp HHTTTTTTTHHHHHHHHHHHHHTTTCCSCCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988753344564556699999999999999999999999999999999999999999999
Q ss_pred HhhccCccCCHHHHHhHHHhhhhhhhhh-hhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccCCC
Q 002089 324 MFEMSMWRCSDELRHRADVLHRSSKKDA-KHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVF 402 (969)
Q Consensus 324 ~~~LS~~~~s~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y 402 (969)
+++||+++||++|++.++...+.+++.. ++|..++..++++||||++|..|++||.+|..++...+.+.....+....|
T Consensus 327 ~~eLS~s~~s~eL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EPYR~~L~~i~~rL~~T~~~~~~~l~~~~~~~~~~~~Y 406 (970)
T 1jqo_A 327 MFELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSF 406 (970)
T ss_dssp HHHCCCCCCCHHHHHHHHHHHHHHCCCCCTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSC
T ss_pred HHHcCCCCCCHHHHHHHHHHHhhcccchhcccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccCC
Confidence 9999999999999987766443333221 344445455678999999999999999999987765443322111123479
Q ss_pred CChHHhhhHHHHHHHHHHhcCCccchhhHHHHHHHHHHHhCCccccccccccchHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 002089 403 TNVEQFLEPLELCYRSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEEKR 482 (969)
Q Consensus 403 ~~~~ell~dL~~i~~SL~~~~~~~~a~~~L~~lir~v~~FGfhla~LDiRQ~S~~H~~al~ei~~~~g~~~Y~~l~E~~r 482 (969)
.+++||++||.+|++||++||+..+|+|.|.+|||+|++|||||++|||||||++|++|++||++++|+++|.+|||++|
T Consensus 407 ~~~~ell~dL~~i~~SL~~~g~~~iA~g~L~~lir~V~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r 486 (970)
T 1jqo_A 407 TSIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKR 486 (970)
T ss_dssp CSHHHHHHHHHHHHHHHHHTSCCTTTTTHHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCChhhhhhhHHHHHHHHHHhCeeccccchhhcchHHHHHHHHHHHHcCCCCcccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCchhhHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccC
Q 002089 483 QEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFE 562 (969)
Q Consensus 483 ~~~L~~eL~~~rpl~~~~~~~s~~~~e~l~~f~~i~~~~~~a~~~yIISmt~sasDvL~V~lL~ke~Gl~~~l~VvPLFE 562 (969)
++||.+||+++|||+++..++|++++++|+||++++++|+++|++||||||+++||||+|++|+|++|+.++|+||||||
T Consensus 487 ~~~L~~eL~~~rpL~~~~~~~s~~~~evL~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFE 566 (970)
T 1jqo_A 487 QEWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFE 566 (970)
T ss_dssp HHHHHHHHHCCSCCCCTTCCCCHHHHHHHHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEEC
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhcHHHHHHHHhhcHHHHhhccCeeEEEEeeccCCcchhHHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCC
Q 002089 563 KLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVG 642 (969)
Q Consensus 563 Ti~DL~~a~~im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~las~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvg 642 (969)
|++||+||+.||++||++|+||+|++++|||||||||||||||+++|+|+||+||++|+++|++|||+++||||||||||
T Consensus 567 Ti~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvg 646 (970)
T 1jqo_A 567 RLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVG 646 (970)
T ss_dssp SHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGG
T ss_pred CHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhhhhhcCCCCcccCceeeecchhHHHhhhCChhHHHHHHHHHHHHHHHccCCCCCCCChhHHHHHHHHHHHHHH
Q 002089 643 RGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIATE 722 (969)
Q Consensus 643 RGGGPt~~ailaqP~gsv~g~irvTEQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~ 722 (969)
|||||+|+||+||||||++|.||+|||||||++|||+|++|.||||++++|++++++.+++.++++|+++|++||+.|++
T Consensus 647 RGGgp~~~ailaqP~gsv~G~ir~TeQGEvI~~kYg~p~~a~~nLe~~~aA~l~a~l~~~~~~~~~~~~~m~~la~~s~~ 726 (970)
T 1jqo_A 647 RGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATE 726 (970)
T ss_dssp GTCCCHHHHHHTSCTTSCTTEEEEEEEHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHcCCCcccCCceEEEeecHHHHHhcCChHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876666778999999999999999
Q ss_pred HHHHhhhcCCchhHHHHhhCchhHhhhCCCCCCCCccCCCCCCCCccccchhhhhhhhcccccchhhHHHHHHHHHHhCc
Q 002089 723 EYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDI 802 (969)
Q Consensus 723 aYr~lv~~~p~F~~yF~~aTPi~ei~~lnIGSRPakR~~~~~ledLRAIPWVFaWtQ~R~~lPgWyGvGsAL~~~~~~~~ 802 (969)
+||++||++|+|++||+++||+.||+.|||||||+||+++++++|||||||||||||+|++||||||+|+||+.++++++
T Consensus 727 ~Yr~lv~~~p~Fv~yF~~aTP~~ei~~LnIGSRPa~R~~~~~i~~LRAIPWvfsWtQ~R~~lP~w~G~GsAl~~~~~~~~ 806 (970)
T 1jqo_A 727 EYRSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDV 806 (970)
T ss_dssp HHHHHHTTCTTHHHHHHHHSCCGGGGGGCCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCT
T ss_pred HHHHHHhcCCCHHHHHHHhChHHHHHhCccCCCCccCCCCCCcccccccchhhHHHhccCCcchhhhHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999887
Q ss_pred CcHHHHHHHHhhCchHHHHHHHHHHHHHhccHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCch
Q 002089 803 RNLHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALYDQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPY 882 (969)
Q Consensus 803 ~~~~~L~~my~~wpfF~~~ldn~em~LaKaD~~Ia~~Y~~l~~d~~~~~i~~~I~~E~~~T~~~vl~itg~~~Ll~~~p~ 882 (969)
++++.|++||++||||+++|||++|+|+|+|+.||++|+++++|++++.||+.|++||++|+++|++|||+++||+++|+
T Consensus 807 ~~l~~L~~my~~wPfF~t~ldn~eM~laK~Dl~iA~~Y~~ll~d~~~~~i~~~i~~E~~~T~~~ll~itg~~~LL~~~p~ 886 (970)
T 1jqo_A 807 RNFQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPF 886 (970)
T ss_dssp THHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHH
T ss_pred hhHHHHHHHHHhChHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccChH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHHHhcCCCCCCcccCcchhhhhhcccCCchhHHhhhccCCCCCcchHHHHHHHHHHHH
Q 002089 883 LKQRLRLRDAYITTLNVCQAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGIA 962 (969)
Q Consensus 883 l~~si~~R~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lllTIngIA 962 (969)
|++||++|||||||||++||+||||+|+.+...+..|+.++++.+ + ++..||+++|+...+++.++++|++||||||
T Consensus 887 l~~si~lR~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~~~lllTInGIA 963 (970)
T 1jqo_A 887 LKQGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFAD--E-NKPAGLVKLNPASEYPPGLEDTLILTMKGIA 963 (970)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCCCCCSCC----------CTTTTTSSSCSSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHhhHHHHHHHHHHHHHHhcCCCCCccccccccccc--c-cchhhhhccCcccccchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999733111112333333222 1 2334999999999999999999999999999
Q ss_pred hhhccCC
Q 002089 963 AGLQNTG 969 (969)
Q Consensus 963 AGlrNTG 969 (969)
|||||||
T Consensus 964 AGlrNTG 970 (970)
T 1jqo_A 964 AGMQNTG 970 (970)
T ss_dssp HHHTCCC
T ss_pred HhcccCC
Confidence 9999999
|
| >1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A | Back alignment and structure |
|---|
| >3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} | Back alignment and structure |
|---|
| >1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A | Back alignment and structure |
|---|
| >3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... | Back alignment and structure |
|---|
| >1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A | Back alignment and structure |
|---|
| >1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 | Back alignment and structure |
|---|
| >1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A | Back alignment and structure |
|---|
| >3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
| >3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
| >3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* | Back alignment and structure |
|---|
| >3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} | Back alignment and structure |
|---|
| >3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A | Back alignment and structure |
|---|
| >3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} | Back alignment and structure |
|---|
| >3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A | Back alignment and structure |
|---|
| >3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 | Back alignment and structure |
|---|
| >3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* | Back alignment and structure |
|---|
| >2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 969 | ||||
| d1jqoa_ | 936 | c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Esc | 0.0 | |
| d1jqna_ | 880 | c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Esc | 0.0 |
| >d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Length = 936 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate carboxylase domain: Phosphoenolpyruvate carboxylase species: Escherichia coli [TaxId: 562]
Score = 1112 bits (2876), Expect = 0.0
Identities = 732/939 (77%), Positives = 821/939 (87%), Gaps = 4/939 (0%)
Query: 32 IEYDALLLDRFLDILQDLHGEDLKETVQECYELAAEYEGKNDPSKFKELGNVLTSLDPGD 91
IEYDALL+DRFL+ILQDLHG L+E VQECYE++A+YEGK D +K ELG LT L P D
Sbjct: 1 IEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPAD 60
Query: 92 SIVIAKAFSHMLNLANLAEELQIAHRRRIKKLKKGDFADENSATTESDIEETFKRLVGEL 151
+I++A + HMLNLANLAEE+QIAHRRR KLKKG FADE SATTESDIEET KRLV E+
Sbjct: 61 AILVASSILHMLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEV 120
Query: 152 NKSPEEIFDALKNQTVDLVLTAHPTQSVRRSLLQKHARIRNCLAQLYAKDITPDDKQELD 211
KSPEE+F+ALKNQTVDLV TAHPTQS RRSLLQK+ARIRNCL QL AKDIT DDKQELD
Sbjct: 121 GKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELD 180
Query: 212 EALQREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINE 271
EALQREIQAAFRTDEIRR QPTPQ EMR GMSY HET+WKGVPKFLRRVDTALKNIGINE
Sbjct: 181 EALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINE 240
Query: 272 RVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFEMSMWR 331
R+PYN LI+FSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLY QIE+LMFE+SMWR
Sbjct: 241 RLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWR 300
Query: 332 CSDELRHRADVLHRSSKKD-AKHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLA 390
C+DELR RA+ LH SS K+YIEFWKQIPPNEPYRVILG VRDKLY TRER R LLA
Sbjct: 301 CNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLA 360
Query: 391 HGISDIPEEAVFTNVEQFLEPLELCYRSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLD 450
G+S+I E+ FT++E+FLEPLELCY+SLC CGD+AIADGSLLD LRQV TFGLSLV+LD
Sbjct: 361 SGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLD 420
Query: 451 IRQESDRHTDVIDAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADV 510
IRQES+RHTDVIDAIT HL IGSYREW E+KRQEWLLSEL GKRPL PDLP+T+EIADV
Sbjct: 421 IRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADV 480
Query: 511 LETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAA 570
+ FHV+AELP D+FG YIISMATAPSDVLAVELLQREC V+QPL VVPLFE+LADL++A
Sbjct: 481 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSA 540
Query: 571 PAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIK 630
PA++ RLFSVDWY +RI GKQ+VM+GYSDSGKDAGR SAAWQLY+AQEE+ +VAK+YG+K
Sbjct: 541 PASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVK 600
Query: 631 LTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRF 690
LT+FHGRGGTVGRGGGPTHLAILSQPPDTI+GS+RVTVQGEVIE FGEEHLCF+TLQRF
Sbjct: 601 LTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRF 660
Query: 691 TAATLEHGMRPPISPKPEWRTMMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRM 750
TAATLEHGM PP+SPKPEWR +MDEMAV+ATEEYRS+V KE RFVEYFR ATPE EYGRM
Sbjct: 661 TAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRM 720
Query: 751 NIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIRNLHMLQE 810
NIGSRP+KR+P GGI +LRAIPWIF+WTQTRFHLPVWLG GAAFK I KD+RN +L+E
Sbjct: 721 NIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKE 780
Query: 811 MYNNWPFFRVTIDLVEMVFAKGNHKIAALYDQLLVSKDLWSFGEKLRVNYEETKGLLLQI 870
MYN WPFFRVT+DL+EMVFAKG+ IA LYD+LLV+++L FG++LR Y ET+ LLLQI
Sbjct: 781 MYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQI 840
Query: 871 AGHKDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKRIRDPNYHVKVRPHISREIMESES 930
AGHKD+LEGDP+LKQ L LR+ YITTLNV QAYTLKRIRDPN+ V +P +S+E +
Sbjct: 841 AGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFADENK 900
Query: 931 VKPADELVKLNLSSEYAPGLEDTLILTMKGIAAGLQNTG 969
LVKLN +SEY PGLEDTLILTMKGIAAG+QNTG
Sbjct: 901 ---PAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG 936
|
| >d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Length = 880 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 969 | |||
| d1jqoa_ | 936 | Phosphoenolpyruvate carboxylase {Escherichia coli | 100.0 | |
| d1jqna_ | 880 | Phosphoenolpyruvate carboxylase {Escherichia coli | 100.0 | |
| d1sgja_ | 231 | Citrate lyase, beta subunit {Deinococcus radiodura | 89.64 | |
| d1izca_ | 299 | Macrophomate synthase {Macrophoma commelinae [TaxI | 83.08 | |
| d1u5ha_ | 223 | Citrate lyase, beta subunit {Mycobacterium tubercu | 81.59 | |
| d1dxea_ | 253 | 2-dehydro-3-deoxy-galactarate aldolase {Escherichi | 81.5 |
| >d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate carboxylase domain: Phosphoenolpyruvate carboxylase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.3e-259 Score=2346.28 Aligned_cols=935 Identities=78% Similarity=1.253 Sum_probs=845.0
Q ss_pred hHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHhhhCCCCchhHHHHHHHHcCCChhhHHHHHHHHHHHhhhhcHHHH
Q 002089 32 IEYDALLLDRFLDILQDLHGEDLKETVQECYELAAEYEGKNDPSKFKELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEE 111 (969)
Q Consensus 32 l~~~~~ll~~ll~vl~e~~G~~~~~~ve~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~yf~L~NiAEe 111 (969)
++.|++|||+|++||++|+|+++|++||+||.++++++..++++..++|.+.|++|+++++..|+||||+||+|+|||||
T Consensus 1 ~~~D~~llg~ll~vi~e~~G~~~~~~vE~iR~ls~~~r~~~~~~~~~~L~~~l~~L~~~~~~~v~RAFs~~f~L~NiAE~ 80 (936)
T d1jqoa_ 1 IEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEE 80 (936)
T ss_dssp CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999988766778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCcccCCCCCcccHHHHHHHHHHhcCCCHHHHHHHhhcCceeEeeccCCCcchhhhHHHHHHHHH
Q 002089 112 LQIAHRRRIKKLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVRRSLLQKHARIR 191 (969)
Q Consensus 112 ~~r~r~~R~~~~~~~~~~~~~~~~~~gs~~~~l~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrtvL~~~~~I~ 191 (969)
+|++|++|......+...+.+..++++|++++|.+|+++.|+++++|++.|+++.|+|||||||||++|||||+|+++|+
T Consensus 81 ~~~~rr~R~~~~~~~~~~~~g~~~~~~sl~~al~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrTvL~~~r~I~ 160 (936)
T d1jqoa_ 81 VQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIR 160 (936)
T ss_dssp HHHHHHHHCC-----------------CHHHHHHHHHTTSCCCHHHHHHHHHTCEEEEEEECCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHhcCCCHHHHHHHHhcCceeEEeccCCCCCchHHHHHHHHHHH
Confidence 99999888744444443444445788999999999855679999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCChhhHHHHHHHHHHHHHHHhcchhhhccCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCCC
Q 002089 192 NCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINE 271 (969)
Q Consensus 192 ~~L~~~d~~~~~~~e~~~~~~~L~~~I~~LW~T~eiR~~KPtv~DE~~~gl~y~~~sl~~avP~~~~~l~~al~~~~~~~ 271 (969)
.+|.++++..+++.|+.+++++|+++|+.||||+|+|..||||.||++|||+||+++||++||.+|++|++++.++|.+.
T Consensus 161 ~lL~~ld~~~lt~~e~~~~~~~L~~~I~~LW~T~eiR~~KPtv~DE~~~~l~y~~~sl~~avP~l~~~l~~al~~~~~~~ 240 (936)
T d1jqoa_ 161 NCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINE 240 (936)
T ss_dssp HHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHhhcccCChHHHHHHHHHHHHHHHHHhCccccccCCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred CCCCCCCccccCcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccCCHHHHHhHHHhhhhhhhh-
Q 002089 272 RVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRADVLHRSSKKD- 350 (969)
Q Consensus 272 ~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~l~~~r~~al~~Y~~~l~~L~~~LS~~~~s~~l~~~~~~~~~~~~~~- 350 (969)
..|..++||+|||||||||||||||||+||++|+.++|+.|+++|++++++|.++||++.++.++......+.+.....
T Consensus 241 ~~~~~~~~irfGSWiGGDRDGNP~VTaevT~~~l~~~r~~al~~Y~~~l~~L~~~LS~s~~~~~~~~~~~~l~~~~~~~~ 320 (936)
T d1jqoa_ 241 RLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKV 320 (936)
T ss_dssp CCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_pred ccccCCCceeeeeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccchhhhhHHHHHHHhhhhhh
Confidence 5676789999999999999999999999999999999999999999999999999999999988876555443322211
Q ss_pred hhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccCCCCChHHhhhHHHHHHHHHHhcCCccchhh
Q 002089 351 AKHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLCSCGDRAIADG 430 (969)
Q Consensus 351 ~~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~SL~~~~~~~~a~~ 430 (969)
.+.+..+...++++||||++|..|++||.+|..++...+.+.........+|.+++||++||.+|++||+++|+..+|+|
T Consensus 321 ~~~~~~~~~~~~~~EPyR~~L~~i~~RL~~t~~~~~~~~~~~~~~~~~~~~Y~s~~ell~dL~~i~~SL~~~g~~~la~~ 400 (936)
T d1jqoa_ 321 TKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADG 400 (936)
T ss_dssp CTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCCSHHHHHHHHHHHHHHHHHTSCCTTTTT
T ss_pred HHHhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCcchhhhh
Confidence 11122233445678999999999999999999987766543332233455899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCccccccccccchHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhHhcCCCCCCCCCCCCCHHHHHH
Q 002089 431 SLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADV 510 (969)
Q Consensus 431 ~L~~lir~v~~FGfhla~LDiRQ~S~~H~~al~ei~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~~~e~ 510 (969)
.|.+||++|++||||||+|||||||++|++|++||++++|+++|.+|+|++|+++|.++|.++||+.+++.+.+++++++
T Consensus 401 ~L~~Lir~V~~FGfhLa~LDIRQ~S~~H~~ai~el~~~~g~~~y~~~~e~~r~~~L~~eL~~~rpl~~~~~~~~~e~~~~ 480 (936)
T d1jqoa_ 401 SLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADV 480 (936)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHHHHHHHHHHCCSCCCCTTCCCCHHHHHH
T ss_pred hhHHHHHHHHHccccccchhhhhhhHHHHHHHHHHHHhcCCCCcccCChHHHHHHHHHHhcCCCCCCCcccccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCchhhHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhhcHHHHhhccCe
Q 002089 511 LETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGK 590 (969)
Q Consensus 511 l~~f~~i~~~~~~a~~~yIISmt~sasDvL~V~lL~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~ 590 (969)
+++|++++++++++||+||||||+++||||+|++|+|++|+.++|+||||||||+||+|||.||++||++|+||+||+|+
T Consensus 481 l~~~~~i~~~g~~aig~YIISmt~s~sDvL~V~lLak~~g~~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~ 560 (936)
T d1jqoa_ 481 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGK 560 (936)
T ss_dssp HHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSE
T ss_pred HHHHHHHHhcCccccccchhccCCcHHHHHHHHHHHHHcCCCCCCCcccccccHHHHHhhHHHHHHHHhChHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeccCCcchhHHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCcchhhhhhcCCCCcccCceeeecch
Q 002089 591 QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQG 670 (969)
Q Consensus 591 QeVMlGYSDS~KDgG~las~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~ailaqP~gsv~g~irvTEQG 670 (969)
||||||||||||||||+||+|+||+||++|+++|++|||+++|||||||||||||||+|+||+|||+||++|+||+||||
T Consensus 561 QeVMlGYSDS~KDgG~laa~W~ly~Aq~~L~~v~~~~gv~l~~FHGRGGsvgRGGGPt~~ai~sqP~gs~~g~ir~TeQG 640 (936)
T d1jqoa_ 561 QQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQG 640 (936)
T ss_dssp EEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHHHHHTSCTTSCTTEEEEEEEH
T ss_pred eEEEeccccccchhHHHHHHHHHHHHHHHHHHHHHHcCceEEEEecCCCccccCCCChHHHHHhCCCCCcCCceEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhCChhHHHHHHHHHHHHHHHccCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHhhCchhHhhhC
Q 002089 671 EVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRM 750 (969)
Q Consensus 671 EvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~aYr~lv~~~p~F~~yF~~aTPi~ei~~l 750 (969)
|||++|||+|.+|.||||++++|++++++.++..+.++|+++|++||+.|+++||++|+++|+|++||+++|||+||+.|
T Consensus 641 EvIs~ky~~~~~a~~~Le~~~aa~l~~~~~~~~~~~~~~~~~~~~ls~~s~~~Yr~lv~~~p~F~~yf~~aTPi~ei~~l 720 (936)
T d1jqoa_ 641 EVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRM 720 (936)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSCCGGGGGG
T ss_pred eehhhhccCHHHHHHHHHHHHHHHHhhccCCCCCCCchHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHhhHHHHhhc
Confidence 99999999999999999999999999999888888899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCCCCccccchhhhhhhhcccccchhhHHHHHHHHHHhCcCcHHHHHHHHhhCchHHHHHHHHHHHHH
Q 002089 751 NIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRVTIDLVEMVFA 830 (969)
Q Consensus 751 nIGSRPakR~~~~~ledLRAIPWVFaWtQ~R~~lPgWyGvGsAL~~~~~~~~~~~~~L~~my~~wpfF~~~ldn~em~La 830 (969)
|||||||||+++++++|||||||||||||+|+|+|||||+|+||++++++++++++.||+||++||||+++|||++|+|+
T Consensus 721 nIGSRPa~R~~~~~l~dLRAIPWVfsWtQ~R~~lPgWyG~GsAl~~~~~~~~~~~~~l~~my~~wpfF~~~l~n~~m~la 800 (936)
T d1jqoa_ 721 NIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFA 800 (936)
T ss_dssp CCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCTTHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred cCCCCCccCCCCCCccccCcCchHHHHHHhhccchHHhhhHHHHHHHHhcCcccHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999998877899999999999999999999999999
Q ss_pred hccHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCchHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 002089 831 KGNHKIAALYDQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKRIRD 910 (969)
Q Consensus 831 KaD~~Ia~~Y~~l~~d~~~~~i~~~I~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~~R~pyvdpLn~lQvelL~r~R~ 910 (969)
||||.||++|+++++|+++++||++|++||++|+++|++|||+++||+++|++++||++|||||||||++||+||+|+|+
T Consensus 801 K~d~~ia~~Y~~l~~d~~~~~~~~~i~~E~~~t~~~~l~it~~~~Ll~~~p~l~~si~~R~py~~pL~~~Qv~lL~r~R~ 880 (936)
T d1jqoa_ 801 KGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRD 880 (936)
T ss_dssp TCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhCHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccChHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCcccCcchhhhhhcccCCchhHHhhhccCCCCCcchHHHHHHHHHHHHhhhccCC
Q 002089 911 PNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGIAAGLQNTG 969 (969)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lllTIngIAAGlrNTG 969 (969)
.+.+...-|.++++..+ ++....+++.++..+.++.+.++|++|||||||||||||
T Consensus 881 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~tingIAaGlrnTG 936 (936)
T d1jqoa_ 881 PNFKVTPQPPLSKEFAD---ENKPAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG 936 (936)
T ss_dssp TTCCCCCCCCCSCC----------CTTTTTSSSCSSCTTHHHHHHHHHHHHHHHHTCCC
T ss_pred cccccccccchhhhccc---ccchhhhhhcccccccchhHHHHHHHHHHHHHHHhccCC
Confidence 54221111222211000 001224556666677788999999999999999999999
|
| >d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} | Back information, alignment and structure |
|---|
| >d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|