Citrus Sinensis ID: 002112
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 965 | 2.2.26 [Sep-21-2011] | |||||||
| Q5GM68 | 963 | Phosphoenolpyruvate carbo | yes | no | 0.996 | 0.998 | 0.896 | 0.0 | |
| Q9FV65 | 967 | Phosphoenolpyruvate carbo | N/A | no | 1.0 | 0.997 | 0.889 | 0.0 | |
| P16097 | 960 | Phosphoenolpyruvate carbo | N/A | no | 0.991 | 0.996 | 0.891 | 0.0 | |
| Q02909 | 967 | Phosphoenolpyruvate carbo | no | no | 1.0 | 0.997 | 0.882 | 0.0 | |
| Q9MAH0 | 967 | Phosphoenolpyruvate carbo | no | no | 1.0 | 0.997 | 0.880 | 0.0 | |
| P29194 | 960 | Phosphoenolpyruvate carbo | N/A | no | 0.994 | 1.0 | 0.884 | 0.0 | |
| Q84VW9 | 968 | Phosphoenolpyruvate carbo | no | no | 1.0 | 0.996 | 0.878 | 0.0 | |
| P27154 | 964 | Phosphoenolpyruvate carbo | N/A | no | 0.998 | 1.0 | 0.880 | 0.0 | |
| Q9FV66 | 965 | Phosphoenolpyruvate carbo | N/A | no | 1.0 | 1.0 | 0.876 | 0.0 | |
| Q01647 | 967 | Phosphoenolpyruvate carbo | N/A | no | 1.0 | 0.997 | 0.872 | 0.0 |
| >sp|Q5GM68|CAPP2_ARATH Phosphoenolpyruvate carboxylase 2 OS=Arabidopsis thaliana GN=PPC2 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1781 bits (4613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 866/966 (89%), Positives = 924/966 (95%), Gaps = 4/966 (0%)
Query: 1 MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC 60
MAARNLEKMASIDAQLRLLAP KVSEDDKL+EYDALLLDRFLDILQDLHGED+RE VQEC
Sbjct: 1 MAARNLEKMASIDAQLRLLAPGKVSEDDKLIEYDALLLDRFLDILQDLHGEDVREFVQEC 60
Query: 61 YELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
YE++A+Y+G R+++KLEELGN+LTSLDPGDSIVVTKSFS+ML+LANLAEEVQIAYRRRIK
Sbjct: 61 YEVAADYDGNRNTEKLEELGNMLTSLDPGDSIVVTKSFSNMLSLANLAEEVQIAYRRRIK 120
Query: 121 -LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRR 179
LKKGDF DE SATTESDIEETLKRL+ QL K+PEEVFDALKNQTVDLV TAHPTQSVRR
Sbjct: 121 KLKKGDFADEASATTESDIEETLKRLL-QLNKTPEEVFDALKNQTVDLVLTAHPTQSVRR 179
Query: 180 SLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAG 239
SLLQK GRIR+CLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRR+PPTPQDEMRAG
Sbjct: 180 SLLQKFGRIRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAG 239
Query: 240 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVT 299
MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVT
Sbjct: 240 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVT 299
Query: 300 RDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQI 359
RDVCLLARMMAANLYFSQIEDLMFE+SMWRCN+ELR RA+ R +KRDAKHYIEFWKQI
Sbjct: 300 RDVCLLARMMAANLYFSQIEDLMFEMSMWRCNEELRVRAER-QRCAKRDAKHYIEFWKQI 358
Query: 360 PPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCA 419
P NEPYR ILGDVRDKLYNTRERARQLL++G+SD+PED +T V+QFLEPLELCYRSLC
Sbjct: 359 PANEPYRAILGDVRDKLYNTRERARQLLSSGVSDVPEDAVFTSVDQFLEPLELCYRSLCD 418
Query: 420 CGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEK 479
CGDRPIADGSLLDFLRQVSTFGL+LV+LDIRQESERH+DV+DAIT HLGIGSY+EWSE+K
Sbjct: 419 CGDRPIADGSLLDFLRQVSTFGLALVKLDIRQESERHSDVLDAITTHLGIGSYKEWSEDK 478
Query: 480 RQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLA 539
RQEWLLSEL GKRPLFG DLPKTEE+ADVLDTF VISELP+DSFGAYIISMATAPSDVLA
Sbjct: 479 RQEWLLSELSGKRPLFGPDLPKTEEVADVLDTFKVISELPSDSFGAYIISMATAPSDVLA 538
Query: 540 VELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599
VELLQREC + PLRVVPLFEKLADLE+APA+VARLFSI+WYRNRI+GKQEVMIGYSDSG
Sbjct: 539 VELLQRECGITDPLRVVPLFEKLADLESAPAAVARLFSIEWYRNRINGKQEVMIGYSDSG 598
Query: 600 KDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 659
KDAGRLSAAWQLYKTQEELVKVAK+YGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH
Sbjct: 599 KDAGRLSAAWQLYKTQEELVKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 658
Query: 660 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIAT 719
G LRVTVQGEVIEQSFGEEHLCFRTLQRF+AATLEHGMHPPVSPKPEWR LMDEMA+IAT
Sbjct: 659 GQLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRVLMDEMAIIAT 718
Query: 720 KEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 779
+EYRS+VF+EPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR
Sbjct: 719 EEYRSVVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 778
Query: 780 FHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYD 839
FHLPVWLGFG AFK VIQKD KNL+ML+EMYN WPFFRVTIDLVEMVFAKGDPGIAALYD
Sbjct: 779 FHLPVWLGFGGAFKRVIQKDSKNLNMLKEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYD 838
Query: 840 KLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQ 899
+LLVSEELQPFGE+LR NY ET+ LLLQVAGH+D+LEGDPYL+QRL+LRD YITTLNVCQ
Sbjct: 839 RLLVSEELQPFGEQLRVNYQETRRLLLQVAGHKDILEGDPYLRQRLQLRDPYITTLNVCQ 898
Query: 900 AYTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAA 959
AYTLKQIRDP+FHVKVRPHLSK+YMES PAAELV+LNP SEYAPGLEDTVILTMKGIAA
Sbjct: 899 AYTLKQIRDPSFHVKVRPHLSKDYMES-SPAAELVKLNPKSEYAPGLEDTVILTMKGIAA 957
Query: 960 GMQNTG 965
GMQNTG
Sbjct: 958 GMQNTG 963
|
Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1 |
| >sp|Q9FV65|CAPPC_FLATR Phosphoenolpyruvate carboxylase 2 OS=Flaveria trinervia GN=PPCC PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P16097|CAPP2_MESCR Phosphoenolpyruvate carboxylase 2 OS=Mesembryanthemum crystallinum GN=PPC2 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q02909|CAPP1_SOYBN Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Glycine max GN=PPC16 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9MAH0|CAPP1_ARATH Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis thaliana GN=PPC1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P29194|CAPP2_SORBI Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q84VW9|CAPP3_ARATH Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana GN=PPC3 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|P27154|CAPP_TOBAC Phosphoenolpyruvate carboxylase OS=Nicotiana tabacum GN=PPC PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9FV66|CAPPB_FLATR Phosphoenolpyruvate carboxylase 1 OS=Flaveria trinervia GN=PPCB PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q01647|CAPP1_FLAPR Phosphoenolpyruvate carboxylase OS=Flaveria pringlei GN=PPCA1 PE=2 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 965 | ||||||
| 255553993 | 965 | Phosphoenolpyruvate carboxylase, putativ | 1.0 | 1.0 | 0.934 | 0.0 | |
| 259506726 | 967 | phosphoenolpyruvate carboxylase [Citrus | 0.998 | 0.996 | 0.932 | 0.0 | |
| 2266947 | 965 | phosphoenolpyruvate carboxylase 1 [Gossy | 1.0 | 1.0 | 0.930 | 0.0 | |
| 149789414 | 965 | phosphoenolpyruvate carboxylase [Ricinus | 1.0 | 1.0 | 0.931 | 0.0 | |
| 155967407 | 965 | phosphoenolpyruvate carboxylase [Jatroph | 1.0 | 1.0 | 0.924 | 0.0 | |
| 225446609 | 965 | PREDICTED: phosphoenolpyruvate carboxyla | 1.0 | 1.0 | 0.915 | 0.0 | |
| 351726780 | 966 | phosphoenolpyruvate carboxylase [Glycine | 1.0 | 0.998 | 0.904 | 0.0 | |
| 224068767 | 965 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.909 | 0.0 | |
| 224114804 | 966 | predicted protein [Populus trichocarpa] | 0.996 | 0.995 | 0.906 | 0.0 | |
| 166714353 | 968 | phosphoenolpyruvate carboxylase [Arachis | 0.998 | 0.995 | 0.903 | 0.0 |
| >gi|255553993|ref|XP_002518037.1| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] gi|223543019|gb|EEF44555.1| Phosphoenolpyruvate carboxylase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1855 bits (4806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/965 (93%), Positives = 937/965 (97%)
Query: 1 MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC 60
MA RNLEKMASIDAQLRLLAP KVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQ+C
Sbjct: 1 MAGRNLEKMASIDAQLRLLAPRKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQDC 60
Query: 61 YELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
YELSAEYEGK + QKL ELG VLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK
Sbjct: 61 YELSAEYEGKHNPQKLAELGKVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
Query: 121 LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180
LKKGDF DENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLV TAHPTQSVRRS
Sbjct: 121 LKKGDFADENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVLTAHPTQSVRRS 180
Query: 181 LLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGM 240
LLQKH RIR+CLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRR+PPTPQDEMRAGM
Sbjct: 181 LLQKHARIRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGM 240
Query: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTR 300
SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVTR
Sbjct: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTR 300
Query: 301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQIP 360
DVCLLARMMAANLYFSQIEDLMFELSMWRCN+ELR RAD LHR+S++DAKHYIEFWKQIP
Sbjct: 301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNEELRVRADELHRTSRKDAKHYIEFWKQIP 360
Query: 361 PNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCAC 420
P+EPYRVILGDVRDKLYNTRER+RQLLANGISDIPE+ +T+VEQFLEPLELCYRSLCAC
Sbjct: 361 PSEPYRVILGDVRDKLYNTRERSRQLLANGISDIPEEATFTNVEQFLEPLELCYRSLCAC 420
Query: 421 GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKR 480
GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDV+DAITKHLGIG YREWSEE R
Sbjct: 421 GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVLDAITKHLGIGFYREWSEEHR 480
Query: 481 QEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAV 540
QEWLL+ELRGKRPLFG DLPKT+EIADVLDTFHVI+ELPAD+FGAYIISMATAPSDVLAV
Sbjct: 481 QEWLLTELRGKRPLFGPDLPKTDEIADVLDTFHVIAELPADNFGAYIISMATAPSDVLAV 540
Query: 541 ELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGK 600
ELLQRECRVKQPLRVVPLFEKLADLEAAPA+VARLFSIDWYRNRI+GKQEVMIGYSDSGK
Sbjct: 541 ELLQRECRVKQPLRVVPLFEKLADLEAAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGK 600
Query: 601 DAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHG 660
DAGRLSAAWQLYK QEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHG
Sbjct: 601 DAGRLSAAWQLYKAQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHG 660
Query: 661 SLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATK 720
SLRVTVQGEVIEQSFGEEHLCFRTLQRF+AATLEHGMHPPVSPKPEWR L+DEMAVIATK
Sbjct: 661 SLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRTLLDEMAVIATK 720
Query: 721 EYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF 780
EYRSIVFQEPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF
Sbjct: 721 EYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRF 780
Query: 781 HLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDK 840
HLPVWLGFG AFKHVI+KD++NLHMLQEMYN WPFFRVTIDLVEMVFAKGDPGIAALYDK
Sbjct: 781 HLPVWLGFGPAFKHVIEKDVRNLHMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDK 840
Query: 841 LLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQA 900
LLVSEEL PFGE+LR NY ETK LLLQVAGH+DLLEGDPYLKQRLRLRDAYITTLNVCQA
Sbjct: 841 LLVSEELWPFGERLRVNYEETKHLLLQVAGHKDLLEGDPYLKQRLRLRDAYITTLNVCQA 900
Query: 901 YTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAG 960
YTLK+IRDP++HV +RPHLSKE+MES KPAAELV+LNP SEYAPGLEDT+ILTMKGIAAG
Sbjct: 901 YTLKRIRDPDYHVTLRPHLSKEHMESSKPAAELVKLNPRSEYAPGLEDTLILTMKGIAAG 960
Query: 961 MQNTG 965
MQNTG
Sbjct: 961 MQNTG 965
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|259506726|gb|ABK54024.2| phosphoenolpyruvate carboxylase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
| >gi|2266947|gb|AAB80714.1| phosphoenolpyruvate carboxylase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|149789414|gb|ABR29878.1| phosphoenolpyruvate carboxylase [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|155967407|gb|ABU41519.1| phosphoenolpyruvate carboxylase [Jatropha curcas] | Back alignment and taxonomy information |
|---|
| >gi|225446609|ref|XP_002280569.1| PREDICTED: phosphoenolpyruvate carboxylase, housekeeping isozyme isoform 1 [Vitis vinifera] gi|147770696|emb|CAN77927.1| hypothetical protein VITISV_018739 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|351726780|ref|NP_001237394.1| phosphoenolpyruvate carboxylase [Glycine max] gi|45505269|gb|AAS67006.1| Phosphoenolpyruvate carboxylase [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224068767|ref|XP_002302820.1| predicted protein [Populus trichocarpa] gi|222844546|gb|EEE82093.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224114804|ref|XP_002316861.1| predicted protein [Populus trichocarpa] gi|222859926|gb|EEE97473.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|166714353|gb|ABY87944.1| phosphoenolpyruvate carboxylase [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 965 | ||||||
| TAIR|locus:2041529 | 963 | PPC2 "phosphoenolpyruvate carb | 0.996 | 0.998 | 0.885 | 0.0 | |
| UNIPROTKB|Q9FV65 | 967 | PPCC "Phosphoenolpyruvate carb | 1.0 | 0.997 | 0.877 | 0.0 | |
| TAIR|locus:2009600 | 967 | PPC1 "phosphoenolpyruvate carb | 1.0 | 0.997 | 0.868 | 0.0 | |
| UNIPROTKB|Q9FV66 | 965 | PPCB "Phosphoenolpyruvate carb | 1.0 | 1.0 | 0.865 | 0.0 | |
| TAIR|locus:2086315 | 968 | PPC3 "phosphoenolpyruvate carb | 1.0 | 0.996 | 0.866 | 0.0 | |
| UNIPROTKB|P30694 | 966 | PPCA "C4 phosphoenolpyruvate c | 1.0 | 0.998 | 0.834 | 0.0 | |
| TAIR|locus:2012448 | 1032 | PPC4 "phosphoenolpyruvate carb | 0.573 | 0.535 | 0.472 | 9.8e-187 | |
| UNIPROTKB|Q9KNT4 | 876 | ppc "Phosphoenolpyruvate carbo | 0.561 | 0.618 | 0.459 | 2.4e-175 | |
| TIGR_CMR|VC_2646 | 876 | VC_2646 "phosphoenolpyruvate c | 0.561 | 0.618 | 0.459 | 2.4e-175 | |
| UNIPROTKB|P00864 | 883 | ppc "Ppc" [Escherichia coli K- | 0.561 | 0.613 | 0.456 | 8.2e-173 |
| TAIR|locus:2041529 PPC2 "phosphoenolpyruvate carboxylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4470 (1578.6 bits), Expect = 0., P = 0.
Identities = 855/966 (88%), Positives = 913/966 (94%)
Query: 1 MAARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC 60
MAARNLEKMASIDAQLRLLAP KVSEDDKL+EYDALLLDRFLDILQDLHGED+RE VQEC
Sbjct: 1 MAARNLEKMASIDAQLRLLAPGKVSEDDKLIEYDALLLDRFLDILQDLHGEDVREFVQEC 60
Query: 61 YELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIK 120
YE++A+Y+G R+++KLEELGN+LTSLDPGDSIVVTKSFS+ML+LANLAEEVQIAYRRRIK
Sbjct: 61 YEVAADYDGNRNTEKLEELGNMLTSLDPGDSIVVTKSFSNMLSLANLAEEVQIAYRRRIK 120
Query: 121 -LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRR 179
LKKGDF DE SATTESDIEETLKRL+ QL K+PEEVFDALKNQTVDLV TAHPTQSVRR
Sbjct: 121 KLKKGDFADEASATTESDIEETLKRLL-QLNKTPEEVFDALKNQTVDLVLTAHPTQSVRR 179
Query: 180 SLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAG 239
SLLQK GRIR+CLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRR+PPTPQDEMRAG
Sbjct: 180 SLLQKFGRIRDCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAG 239
Query: 240 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVT 299
MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVT EVT
Sbjct: 240 MSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVT 299
Query: 300 RDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDAKHYIEFWKQI 359
RDVCLLARMMAANLYFSQIEDLMFE+SMWRCN+ELR RA+ R +KRDAKHYIEFWKQI
Sbjct: 300 RDVCLLARMMAANLYFSQIEDLMFEMSMWRCNEELRVRAER-QRCAKRDAKHYIEFWKQI 358
Query: 360 PPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCA 419
P NEPYR ILGDVRDKLYNTRERARQLL++G+SD+PED +T V+QFLEPLELCYRSLC
Sbjct: 359 PANEPYRAILGDVRDKLYNTRERARQLLSSGVSDVPEDAVFTSVDQFLEPLELCYRSLCD 418
Query: 420 CGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEK 479
CGDRPIADGSLLDFLRQVSTFGL+LV+LDIRQESERH+DV+DAIT HLGIGSY+EWSE+K
Sbjct: 419 CGDRPIADGSLLDFLRQVSTFGLALVKLDIRQESERHSDVLDAITTHLGIGSYKEWSEDK 478
Query: 480 RQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLA 539
RQEWLLSEL GKRPLFG DLPKTEE+ADVLDTF VISELP+DSFGAYIISMATAPSDVLA
Sbjct: 479 RQEWLLSELSGKRPLFGPDLPKTEEVADVLDTFKVISELPSDSFGAYIISMATAPSDVLA 538
Query: 540 VELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599
VELLQREC + PLRVVPLFEKLADLE+APA+VARLFSI+WYRNRI+GKQEVMIGYSDSG
Sbjct: 539 VELLQRECGITDPLRVVPLFEKLADLESAPAAVARLFSIEWYRNRINGKQEVMIGYSDSG 598
Query: 600 KDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIH 659
KDAGRLSAAWQLYKTQEELVKVAK+YGVKLTMFH PTHLAILSQPPDTIH
Sbjct: 599 KDAGRLSAAWQLYKTQEELVKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 658
Query: 660 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIAT 719
G LRVTVQGEVIEQSFGEEHLCFRTLQRF+AATLEHGMHPPVSPKPEWR LMDEMA+IAT
Sbjct: 659 GQLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRVLMDEMAIIAT 718
Query: 720 KEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 779
+EYRS+VF+EPRFVEYFRLATPE+EYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR
Sbjct: 719 EEYRSVVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 778
Query: 780 FHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYD 839
FHLPVWLGFG AFK VIQKD KNL+ML+EMYN WPFFRVTIDLVEMVFAKGDPGIAALYD
Sbjct: 779 FHLPVWLGFGGAFKRVIQKDSKNLNMLKEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYD 838
Query: 840 KLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQ 899
+LLVSEELQPFGE+LR NY ET+ LLLQVAGH+D+LEGDPYL+QRL+LRD YITTLNVCQ
Sbjct: 839 RLLVSEELQPFGEQLRVNYQETRRLLLQVAGHKDILEGDPYLRQRLQLRDPYITTLNVCQ 898
Query: 900 AYTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAA 959
AYTLKQIRDP+FHVKVRPHLSK+YMES PAAELV+LNP SEYAPGLEDTVILTMKGIAA
Sbjct: 899 AYTLKQIRDPSFHVKVRPHLSKDYMES-SPAAELVKLNPKSEYAPGLEDTVILTMKGIAA 957
Query: 960 GMQNTG 965
GMQNTG
Sbjct: 958 GMQNTG 963
|
|
| UNIPROTKB|Q9FV65 PPCC "Phosphoenolpyruvate carboxylase 2" [Flaveria trinervia (taxid:4227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2009600 PPC1 "phosphoenolpyruvate carboxylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9FV66 PPCB "Phosphoenolpyruvate carboxylase 1" [Flaveria trinervia (taxid:4227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086315 PPC3 "phosphoenolpyruvate carboxylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P30694 PPCA "C4 phosphoenolpyruvate carboxylase" [Flaveria trinervia (taxid:4227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2012448 PPC4 "phosphoenolpyruvate carboxylase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9KNT4 ppc "Phosphoenolpyruvate carboxylase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_2646 VC_2646 "phosphoenolpyruvate carboxylase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P00864 ppc "Ppc" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A6VUQ5 | CAPP_MARMS | 4, ., 1, ., 1, ., 3, 1 | 0.4118 | 0.8943 | 0.9851 | yes | no |
| A3MA94 | CAPP_ACIBT | 4, ., 1, ., 1, ., 3, 1 | 0.4040 | 0.8953 | 0.9664 | yes | no |
| Q6LVH1 | CAPP_PHOPR | 4, ., 1, ., 1, ., 3, 1 | 0.4021 | 0.8797 | 0.9691 | yes | no |
| P27154 | CAPP_TOBAC | 4, ., 1, ., 1, ., 3, 1 | 0.8808 | 0.9989 | 1.0 | N/A | no |
| P10490 | CAPP1_MESCR | 4, ., 1, ., 1, ., 3, 1 | 0.8333 | 1.0 | 0.9989 | N/A | no |
| Q1R3V5 | CAPP_ECOUT | 4, ., 1, ., 1, ., 3, 1 | 0.4069 | 0.8932 | 0.9762 | yes | no |
| Q9AU12 | CAPP_PHAVU | 4, ., 1, ., 1, ., 3, 1 | 0.8522 | 1.0 | 0.9969 | N/A | no |
| Q02735 | CAPP_MEDSA | 4, ., 1, ., 1, ., 3, 1 | 0.8590 | 0.9979 | 0.9968 | N/A | no |
| A1AID4 | CAPP_ECOK1 | 4, ., 1, ., 1, ., 3, 1 | 0.4069 | 0.8932 | 0.9762 | yes | no |
| Q5E2E3 | CAPP_VIBF1 | 4, ., 1, ., 1, ., 3, 1 | 0.3980 | 0.8829 | 0.9726 | yes | no |
| B5FBP8 | CAPP_VIBFM | 4, ., 1, ., 1, ., 3, 1 | 0.3980 | 0.8829 | 0.9726 | yes | no |
| B5XZ20 | CAPP_KLEP3 | 4, ., 1, ., 1, ., 3, 1 | 0.4047 | 0.8932 | 0.9762 | yes | no |
| Q5GM68 | CAPP2_ARATH | 4, ., 1, ., 1, ., 3, 1 | 0.8964 | 0.9968 | 0.9989 | yes | no |
| P29193 | CAPP1_SACHY | 4, ., 1, ., 1, ., 3, 1 | 0.8757 | 1.0 | 0.9989 | N/A | no |
| P29195 | CAPP1_SORBI | 4, ., 1, ., 1, ., 3, 1 | 0.8696 | 0.9927 | 0.9979 | N/A | no |
| P29194 | CAPP2_SORBI | 4, ., 1, ., 1, ., 3, 1 | 0.8843 | 0.9948 | 1.0 | N/A | no |
| Q6DAR6 | CAPP_ERWCT | 4, ., 1, ., 1, ., 3, 1 | 0.4095 | 0.8901 | 0.9772 | yes | no |
| P29196 | CAPP_SOLTU | 4, ., 1, ., 1, ., 3, 1 | 0.8871 | 0.9989 | 0.9989 | N/A | no |
| C6DI86 | CAPP_PECCP | 4, ., 1, ., 1, ., 3, 1 | 0.4073 | 0.8901 | 0.9772 | yes | no |
| P16097 | CAPP2_MESCR | 4, ., 1, ., 1, ., 3, 1 | 0.8916 | 0.9917 | 0.9968 | N/A | no |
| Q6F6Q6 | CAPP_ACIAD | 4, ., 1, ., 1, ., 3, 1 | 0.4081 | 0.9139 | 0.9865 | yes | no |
| Q9FV66 | CAPPB_FLATR | 4, ., 1, ., 1, ., 3, 1 | 0.8766 | 1.0 | 1.0 | N/A | no |
| Q9FV65 | CAPPC_FLATR | 4, ., 1, ., 1, ., 3, 1 | 0.8893 | 1.0 | 0.9979 | N/A | no |
| B7MI92 | CAPP_ECO45 | 4, ., 1, ., 1, ., 3, 1 | 0.4069 | 0.8932 | 0.9762 | yes | no |
| Q01647 | CAPP1_FLAPR | 4, ., 1, ., 1, ., 3, 1 | 0.8728 | 1.0 | 0.9979 | N/A | no |
| Q9HXV3 | CAPP_PSEAE | 4, ., 1, ., 1, ., 3, 1 | 0.4207 | 0.8860 | 0.9738 | yes | no |
| A6V1A0 | CAPP_PSEA7 | 4, ., 1, ., 1, ., 3, 1 | 0.4175 | 0.8860 | 0.9738 | yes | no |
| Q02909 | CAPP1_SOYBN | 4, ., 1, ., 1, ., 3, 1 | 0.8821 | 1.0 | 0.9979 | no | no |
| P15804 | CAPP3_SORBI | 4, ., 1, ., 1, ., 3, 1 | 0.7702 | 0.9886 | 0.9937 | N/A | no |
| B7LUN9 | CAPP_ESCF3 | 4, ., 1, ., 1, ., 3, 1 | 0.4047 | 0.8932 | 0.9762 | yes | no |
| P51062 | CAPP_PEA | 4, ., 1, ., 1, ., 3, 1 | 0.8540 | 0.9979 | 0.9958 | N/A | no |
| P51063 | CAPP_PICAB | 4, ., 1, ., 1, ., 3, 1 | 0.8725 | 0.9979 | 1.0 | N/A | no |
| P51061 | CAPP2_SOYBN | 4, ., 1, ., 1, ., 3, 1 | 0.8634 | 1.0 | 0.9979 | no | no |
| A4SIM0 | CAPP_AERS4 | 4, ., 1, ., 1, ., 3, 1 | 0.4121 | 0.8849 | 0.9737 | yes | no |
| Q43299 | CAPP_AMAHP | 4, ., 1, ., 1, ., 3, 1 | 0.8281 | 0.9979 | 0.9989 | N/A | no |
| Q9MAH0 | CAPP1_ARATH | 4, ., 1, ., 1, ., 3, 1 | 0.8800 | 1.0 | 0.9979 | no | no |
| Q8EK30 | CAPP_SHEON | 4, ., 1, ., 1, ., 3, 1 | 0.4008 | 0.8922 | 0.9772 | yes | no |
| A4XXP6 | CAPP_PSEMY | 4, ., 1, ., 1, ., 3, 1 | 0.4273 | 0.9025 | 0.9920 | yes | no |
| A1U2U4 | CAPP_MARAV | 4, ., 1, ., 1, ., 3, 1 | 0.4180 | 0.8880 | 0.9727 | yes | no |
| Q84VW9 | CAPP3_ARATH | 4, ., 1, ., 1, ., 3, 1 | 0.8780 | 1.0 | 0.9969 | no | no |
| A8GL86 | CAPP_SERP5 | 4, ., 1, ., 1, ., 3, 1 | 0.4060 | 0.8860 | 0.9738 | yes | no |
| Q2SL23 | CAPP_HAHCH | 4, ., 1, ., 1, ., 3, 1 | 0.4208 | 0.8911 | 0.9761 | yes | no |
| Q9KNT4 | CAPP_VIBCH | 4, ., 1, ., 1, ., 3, 1 | 0.4057 | 0.8839 | 0.9737 | yes | no |
| P04711 | CAPP1_MAIZE | 4, ., 1, ., 1, ., 3, 1 | 0.7960 | 0.9927 | 0.9876 | N/A | no |
| Q87L54 | CAPP_VIBPA | 4, ., 1, ., 1, ., 3, 1 | 0.4075 | 0.8860 | 0.9749 | yes | no |
| A0KFU8 | CAPP_AERHH | 4, ., 1, ., 1, ., 3, 1 | 0.4132 | 0.8849 | 0.9737 | yes | no |
| C4L7S3 | CAPP_TOLAT | 4, ., 1, ., 1, ., 3, 1 | 0.4122 | 0.8777 | 0.9657 | yes | no |
| P30694 | CAPPA_FLATR | 4, ., 1, ., 1, ., 3, 1 | 0.8457 | 1.0 | 0.9989 | N/A | no |
| P51059 | CAPP2_MAIZE | 4, ., 1, ., 1, ., 3, 1 | 0.8781 | 0.9948 | 0.9927 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.1.31 | 0.994 |
| 3rd Layer | 4.1.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | GPEPC | RecName- Full=Phosphoenolpyruvate carboxylase; EC=4.1.1.31; (965 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00019865001 | • | • | 0.951 | |||||||
 | GSVIVG00025495001 | • | • | 0.935 | |||||||
 | 26N20_30 | • | • | 0.935 | |||||||
 | GSVIVG00024850001 | • | • | 0.934 | |||||||
 | GSVIVG00002610001 | • | • | 0.933 | |||||||
 | GSVIVG00006511001 | • | • | 0.932 | |||||||
 | GSVIVG00006460001 | • | • | 0.927 | |||||||
 | GSVIVG00023818001 | • | • | 0.925 | |||||||
 | GSVIVG00020102001 | • | • | 0.925 | |||||||
 | GSVIVG00038611001 | • | • | 0.925 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 965 | |||
| pfam00311 | 794 | pfam00311, PEPcase, Phosphoenolpyruvate carboxylas | 0.0 | |
| PRK00009 | 911 | PRK00009, PRK00009, phosphoenolpyruvate carboxylas | 0.0 | |
| COG2352 | 910 | COG2352, Ppc, Phosphoenolpyruvate carboxylase [Ene | 0.0 | |
| PTZ00398 | 974 | PTZ00398, PTZ00398, phosphoenolpyruvate carboxylas | 0.0 |
| >gnl|CDD|215852 pfam00311, PEPcase, Phosphoenolpyruvate carboxylase | Back alignment and domain information |
|---|
Score = 1192 bits (3086), Expect = 0.0
Identities = 399/824 (48%), Positives = 522/824 (63%), Gaps = 50/824 (6%)
Query: 162 NQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFR 221
+ LVFTAHPT+ VRR++L K RI L QL D+TP ++QELDE L+ EI+ ++
Sbjct: 1 ELDIRLVFTAHPTEIVRRTILDKQRRIAELLAQLDDADLTPRERQELDEQLREEIRLLWQ 60
Query: 222 TDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFS 281
TDE+R+ PT DE+R G+SYF ET++ +P+ RR+D ALK R+P ++F
Sbjct: 61 TDELRQFKPTVLDEVRNGLSYFEETLFDALPQLYRRLDRALKESFPGLRLPLPNF-LRFG 119
Query: 282 SWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSM----WRCNDELRAR 337
SW+GGDRDGNP VT+EVT + LL R +A LY +E L FELSM + EL A
Sbjct: 120 SWIGGDRDGNPNVTAEVTWETLLLQRELALELYLKSVEALRFELSMSLRWSDVSPELLAS 179
Query: 338 ADGLHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPED 397
+ R ++ + Y E + EPYR+ L +R +L NTRER LLA ++P
Sbjct: 180 LE---RDREQLPEVYEE-LAERYRQEPYRLKLAYIRARLENTRERLAALLAGR--ELPPG 233
Query: 398 IAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHT 457
AYT E+ LE LEL YRSL G +ADG LLD +RQV FG L LDIRQES RH
Sbjct: 234 EAYTSAEELLEDLELIYRSLRETGGGLLADGRLLDLIRQVEVFGFHLATLDIRQESTRHE 293
Query: 458 DVIDAITKHLGI-GSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVIS 516
D + IT++LG+ G Y E SEE+RQ WLL EL +RPL DLP +EE +VLDTF VI+
Sbjct: 294 DALAEITRYLGLPGDYAELSEEERQAWLLRELETRRPLIPPDLPFSEETREVLDTFRVIA 353
Query: 517 ELPA----DSFGAYIISMATAPSDVLAVELLQRECRVKQP------LRVVPLFEKLADLE 566
L ++ G YIISMA SDVL V LL +E + P LRVVPLFE + DL
Sbjct: 354 RLQQEFGPEAIGTYIISMAHTASDVLEVLLLAKEAGLLDPATGRSTLRVVPLFETIEDLR 413
Query: 567 AAPASVARLFSIDWYRNRISG---KQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAK 623
AP + +LFS+ WYR ++G QEVM+GYSDS KD G L++ W+LYK QE LVKVA+
Sbjct: 414 NAPEIMRQLFSLPWYRELLAGRGDLQEVMLGYSDSNKDGGFLTSNWELYKAQEALVKVAE 473
Query: 624 QYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFR 683
+YGVKL +FHGRGG+VGRGGGP + AIL+QPP T++G +R+T QGEVI +G L R
Sbjct: 474 KYGVKLRLFHGRGGSVGRGGGPAYEAILAQPPGTLNGRIRITEQGEVIASKYGLPELALR 533
Query: 684 TLQRFSAATLEHGMHPPVSPK-PEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPE 742
L+ ++AA LE + PP PK PEWR +M+E++ + K YR++V++ P FV+YFR ATP
Sbjct: 534 NLELYTAAVLEASLLPPPPPKIPEWREIMEELSERSRKAYRALVYETPDFVDYFRQATPI 593
Query: 743 MEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKN 802
E G++NIGSRP++RK SGGIESLRAIPW+F+WTQ+RF LP W G G A + +QKD N
Sbjct: 594 QEIGKLNIGSRPARRKGSGGIESLRAIPWVFSWTQSRFLLPAWYGVGTALQAFLQKDPGN 653
Query: 803 LHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEEL-QPFGEKLRANYAET 861
L +L+EMY WPFFR I VEMV AK D IA Y +LLV EL + E++RA Y T
Sbjct: 654 LKLLREMYREWPFFRTLISNVEMVLAKADLQIARHYVQLLVDPELRERLFEQIRAEYELT 713
Query: 862 KSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKQIRDPNFHVKVRPHLSK 921
+ L+L++ G ++LL+ +P L++ +RLR+ YI LN Q LK++R N
Sbjct: 714 RELVLKITGQKELLDDNPVLQRSIRLRNPYIDPLNYLQVELLKRLRQANE---------- 763
Query: 922 EYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQNTG 965
+ T L D +ILT+ GIAAGM+NTG
Sbjct: 764 -------------QGPSTYSRDELLRDALILTINGIAAGMRNTG 794
|
Length = 794 |
| >gnl|CDD|234570 PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|225227 COG2352, Ppc, Phosphoenolpyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|173589 PTZ00398, PTZ00398, phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 965 | |||
| COG2352 | 910 | Ppc Phosphoenolpyruvate carboxylase [Energy produc | 100.0 | |
| PRK00009 | 911 | phosphoenolpyruvate carboxylase; Reviewed | 100.0 | |
| PTZ00398 | 974 | phosphoenolpyruvate carboxylase; Provisional | 100.0 | |
| PF00311 | 794 | PEPcase: Phosphoenolpyruvate carboxylase; InterPro | 100.0 | |
| PRK13655 | 494 | phosphoenolpyruvate carboxylase; Provisional | 100.0 | |
| TIGR02751 | 506 | PEPCase_arch phosphoenolpyruvate carboxylase, arch | 100.0 | |
| PF14010 | 491 | PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 | 99.39 | |
| COG1892 | 488 | Phosphoenolpyruvate carboxylase [Carbohydrate tran | 98.88 | |
| PF03328 | 221 | HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family | 96.24 | |
| PRK10558 | 256 | alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro | 95.61 | |
| TIGR03239 | 249 | GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co | 94.91 | |
| TIGR01064 | 473 | pyruv_kin pyruvate kinase. This enzyme is a homote | 93.87 | |
| PRK08187 | 493 | pyruvate kinase; Validated | 90.01 | |
| PRK09206 | 470 | pyruvate kinase; Provisional | 89.76 | |
| PLN02623 | 581 | pyruvate kinase | 89.69 | |
| PRK05826 | 465 | pyruvate kinase; Provisional | 89.23 | |
| PTZ00300 | 454 | pyruvate kinase; Provisional | 88.37 | |
| TIGR01588 | 288 | citE citrate lyase, beta subunit. This is a model | 88.0 | |
| TIGR02311 | 249 | HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola | 87.21 | |
| cd00288 | 480 | Pyruvate_Kinase Pyruvate kinase (PK): Large allost | 86.68 | |
| PRK06247 | 476 | pyruvate kinase; Provisional | 86.22 | |
| PRK06354 | 590 | pyruvate kinase; Provisional | 85.71 |
| >COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-262 Score=2240.94 Aligned_cols=886 Identities=43% Similarity=0.721 Sum_probs=833.1
Q ss_pred chHhhHHHHHHHHHHH-HHHHhhhChhHHHHHHHHHHHHHhhhcCCChhHHHHHHHHhcCCCcchHHHHHHHHHHHhhhh
Q 002112 27 DDKLVEYDALLLDRFL-DILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLA 105 (965)
Q Consensus 27 ~~~~l~~~~~ll~~ll-evl~e~~G~~~~~~vE~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~yf~L~ 105 (965)
++..++.|+.+||.+| |+|+++.|+++|++||+||+++++.|.+ +..++++|.+.+.+|+.+++..|+||||+|++|+
T Consensus 5 ~~~~lr~~v~~Lg~lLge~i~e~~g~~~~e~ve~ir~~s~~~r~~-~~~~~~~L~~~l~~Ls~~~~~~vaRaFs~f~~L~ 83 (910)
T COG2352 5 KYSALRSDVSMLGRLLGETIREAEGEAILELVETIRKLSKESRAG-DQADRQELEATLANLSNDEAIPVARAFSQFLLLA 83 (910)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-chhhHHHHHHHHcCCCHhhhhHHHHHHHHHhhhh
Confidence 5678999999999998 9999999999999999999999988775 4567789999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhcCCCcccCcCCCcchHHHHHHHHHHHcCCCHHHHHHHhhcCceeEeeccCCCccchhhHHHHH
Q 002112 106 NLAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKH 185 (965)
Q Consensus 106 NiAEe~hr~r~~r~~~~~~~~~~~~~~~~~~sl~~~l~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrtvL~~~ 185 (965)
||||++|+.|+++.+...+. ..+++..++++| ++.|++++++.+.|.++.|+|||||||||++||||++|+
T Consensus 84 NiaEd~~~~~r~~~~~~~~~--------~~~sL~~~~~~L-k~~~~~~~~v~~~l~~l~v~lVLTAHPTEv~RrTv~~~~ 154 (910)
T COG2352 84 NIAEDYHRIRRRQIHEAAGD--------SDGSLAATLKKL-KEQGLSPETVARALENLNVELVLTAHPTEVQRRTVIDKQ 154 (910)
T ss_pred hHHHHhhhHhhhhhhhccCC--------CcchHHHHHHHH-HhcCCCHHHHHHHHHhCceeEEEecCchHHHHHHHHHHH
Confidence 99999999987765544321 338999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccCCCCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Q 002112 186 GRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNI 265 (965)
Q Consensus 186 r~I~~~L~~~~~~~~~~~e~~~~~~~L~~~i~~LW~T~eiR~~kPtv~DE~~~~l~y~~~~l~~avP~~~~~l~~~l~~~ 265 (965)
++|..+|.+++...+++. +++++++|++.|..+|||++||..||||.||++||++||++|||++||+++++++.++.++
T Consensus 155 ~~I~~lL~~~~~~~~~~~-~~~~~~~L~~~I~~~W~TdeiR~~rptv~DEi~~gl~y~~~sl~~avP~l~r~~~~~~~~~ 233 (910)
T COG2352 155 REINRLLRKLDHADLSDE-RARIRRRLRRLIAQLWQTDEIRKLRPTVLDEIKNGLAYYENSLWQAVPKLLRELNEALQET 233 (910)
T ss_pred HHHHHHHHHhhcccchhH-HHHHHHHHHHHHHHHhhhhHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999987766666 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCcccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcC----CCCCHHHHHHHhhh
Q 002112 266 GINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSM----WRCNDELRARADGL 341 (965)
Q Consensus 266 ~~~~~~p~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~l~~~r~~al~~y~~~l~~L~~~LS~----~~~s~~l~~~~~~~ 341 (965)
++ ...|..++|++|||||||||||||||||+||++++..+|+.++++|.++|.+|+.+||+ ++||++|+++++..
T Consensus 234 ~~-~~~~~~~~p~~~gSWiGGDRDGNPfVTae~tr~~~~~~r~~~~~~Yl~~i~~L~~eLS~S~~~~~vs~el~ala~~~ 312 (910)
T COG2352 234 FG-ELLPVEAVPLRFGSWIGGDRDGNPFVTAETTRQALLLQRWKALDLYLKEIQKLYSELSMSTRLVKVSPELLALAGES 312 (910)
T ss_pred cc-cccCCCCCccccccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhcccCCHHHHHHHhcC
Confidence 75 45676778999999999999999999999999999999999999999999999999999 68999999987653
Q ss_pred hhcchhhhhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCChHHhhhHHHHHHHHHHhcC
Q 002112 342 HRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACG 421 (965)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~SL~~~~ 421 (965)
.+. ..+ ..+||||++|..|+.||.+|..++.+...+.. ......+|.+++||++||..|++||.+||
T Consensus 313 ~d~----~~~--------r~~EPYR~al~~i~~rL~~T~~~l~~~~~~~~-~~~~~~~y~~~~el~~dL~~i~~SL~~~G 379 (910)
T COG2352 313 QDQ----SIR--------RADEPYRRALKYIRSRLMATQAYLDGLLAGEE-GVGPEPPYTSPEELLEDLYAIYQSLHACG 379 (910)
T ss_pred ccc----cch--------hccccHHHHHHHHHHHHHHHHHHHhccccccc-cCCCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 322 111 35899999999999999999988766543221 22334589999999999999999999999
Q ss_pred CccccchHHHHHHHHHHhcCCccccccccccchHHHHHHHHHHHHcCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCC
Q 002112 422 DRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIG-SYREWSEEKRQEWLLSELRGKRPLFGSDLP 500 (965)
Q Consensus 422 ~~~~a~~~L~~lir~v~~FGfhla~LDiRQ~S~~H~~a~~el~~~~g~~-~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~ 500 (965)
++.+|+|.|.+++++|++|||||++|||||||++|++||+||++++|++ +|.+|+|++|++||.+||.++|||+++.++
T Consensus 380 ~~~la~g~L~~ll~~v~~FGf~L~~LDiRQ~S~~h~~avaEL~~~ag~~~dY~~lsE~~K~~~L~~EL~s~RPL~p~~~~ 459 (910)
T COG2352 380 MEILADGRLLDLLRRVEVFGFHLVSLDIRQESTRHEEAVAELLRYAGLGADYSSLSEEDKQAFLLRELSSRRPLLPPFWQ 459 (910)
T ss_pred CceeccchHHHHHHHHHhcCceeeccccccccchHHHHHHHHHHHccCCCChhhcCHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhC----CCcchhhHHhccCCChhhHHHHHHHHHHcCCC----CCCccccccCChHHHhchHHHH
Q 002112 501 KTEEIADVLDTFHVISEL----PADSFGAYIISMATAPSDVLAVELLQRECRVK----QPLRVVPLFEKLADLEAAPASV 572 (965)
Q Consensus 501 ~s~~~~e~l~~f~~i~~~----~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~----~~l~VvPLFETi~DL~~a~~Im 572 (965)
+|+.++++|+||++++++ |.++|++||||||+++||||||++|+||+|+. .+++|||||||||||+||+.||
T Consensus 460 ~Se~t~~~L~t~r~a~~~~~~~G~~~i~~yIISma~s~SDvLev~lLlKE~Gl~~~~~~~v~VvPLFETieDL~na~~vm 539 (910)
T COG2352 460 PSEETREELATFRVAAEAKDEFGEDAIGAYIISMAESVSDVLEVLLLLKEAGLVDPERARVPVVPLFETIEDLDNAPDVM 539 (910)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccCCHHHHHHHHHHHHHhCCCCccCCccccccccccHHHHhccHHHH
Confidence 999999999999999976 56789999999999999999999999999997 7999999999999999999999
Q ss_pred HHHhccHHHHhhc---CCeeEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhhh
Q 002112 573 ARLFSIDWYRNRI---SGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLA 649 (965)
Q Consensus 573 ~~ll~~p~yr~~l---~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~a 649 (965)
++||+.|+||..| +|.||||||||||||||||+||||++|+||+.|+++|+++||+++|||||||||||||||+|.|
T Consensus 540 ~~ll~l~~yR~~l~~~~n~QEVMlGYSDSnKDgG~laa~Wa~y~Aq~aLv~~~~~~gV~LrlFHGRGGtVGRGGGPa~~A 619 (910)
T COG2352 540 TQLLNLPLYRALLAGRGNVQEVMLGYSDSNKDGGYLAANWALYKAQLALVELCEKAGVELRLFHGRGGSVGRGGGPAYAA 619 (910)
T ss_pred HHHHcChHHHHHHcCCCCceEEEecccccccccchhhhHHHHHHHHHHHHHHHHHhCceEEEEccCCCCCCCCCchHHHH
Confidence 9999999999999 3599999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcccCceeeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhhc
Q 002112 650 ILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPP-VSPKPEWRALMDEMAVIATKEYRSIVFQ 728 (965)
Q Consensus 650 ilaqP~gs~~g~ir~TeQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~-~~~~~~~~~~m~~ls~~s~~~Yr~lv~~ 728 (965)
|+|||||||+|+||+|||||||+.|||+|++|.||||.+++|+|++++.|+ +.|+++|+.+||++|+.||++||+|||+
T Consensus 620 ILsQP~gsv~g~iRiTEQGE~I~~Kyg~p~~A~~nLe~l~sAvLeAsllp~~~dp~~~~~~iMd~ls~~S~~~YR~lV~~ 699 (910)
T COG2352 620 ILSQPPGSVKGRIRITEQGEMIAFKYGLPEVARRNLETLVSAVLEASLLPPKPDPKESWRAIMDELSDISCDAYRGLVRE 699 (910)
T ss_pred HhcCCCcccCCceEeehhHHHHHHhhCChHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999877 6778889999999999999999999999
Q ss_pred CCchHHHHHhhCchhHhhhCCCCCCCCccCCC-CCCCCccccchhhhhhhhhccccchhhHHHHHHHHHHhCCCcHHHHH
Q 002112 729 EPRFVEYFRLATPEMEYGRMNIGSRPSKRKPS-GGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQ 807 (965)
Q Consensus 729 ~p~F~~yF~~aTPi~ei~~lnIGSRPakR~~~-~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAL~~~~~~~~~~~~~L~ 807 (965)
+|+|++||+++|||+||++|||||||||||.. ++++|||||||||||||+|+|||||||+|+|+++++++++++++.|+
T Consensus 700 ~pdFvdyF~~~TPi~EIs~LniGSRPA~Rk~~~~~ie~LRAIPWVFSWsQnR~mLP~WyG~Gsal~~~i~~g~~~~~~L~ 779 (910)
T COG2352 700 NPDFVDYFRQATPIQEISKLNIGSRPASRKPTTGGIESLRAIPWVFSWTQNRLMLPAWYGVGSALQRFIEEGPENLALLR 779 (910)
T ss_pred CCcHHHHHHhcCcHHHHhcCCCCCCCcCCCCCCCccccccccchhhhhhhhhhcchhhhhhhHHHHHHHHcCcchHHHHH
Confidence 99999999999999999999999999999986 56999999999999999999999999999999999999988899999
Q ss_pred HHHhhChhHHHHHHHHHHHHHhcCHHHHHHHhhccCCccch-HHHHHHHHHHHHHHHHHHHHhCCCCccCCCchHHHHHH
Q 002112 808 EMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQ-PFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLR 886 (965)
Q Consensus 808 ~my~~wpfF~~~ldn~em~LaKaD~~Ia~~Y~~l~~d~~~~-~i~~~i~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~ 886 (965)
+||++||||+++|+||+|||+|+||.||++|+++++|+++. ++|+.|++||+.|+++++.|+|+++||+++|+|++||.
T Consensus 780 ~m~~~WPFF~s~Lsn~emvlaKsd~~iA~~Y~qll~d~~~~~~lf~~i~~e~~~T~~~vl~I~~~~~LL~d~p~La~Si~ 859 (910)
T COG2352 780 DMYQNWPFFSSRLSNMEMVLAKSDLWLAEHYAQLLVDPELGERLFDQIREEYQLTRKVVLAITGHDELLADNPWLAESIA 859 (910)
T ss_pred HHHhcCcHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhhcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999965 99999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHhcCCCCCCccCCcchhhhhhccchhhhhhhcCCCCCCCcchhHHHHHHHHHHHhhhccCC
Q 002112 887 LRDAYITTLNVCQAYTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQNTG 965 (965)
Q Consensus 887 ~R~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~TingIAaGlrnTG 965 (965)
+||||+||||++|||||||+|+.... + .++.+++++++|||||||||||||
T Consensus 860 lRn~Y~dPLn~LQvELLkR~R~~~~~-~---------------------------~~~~~er~i~lTInGIAaGlRNTG 910 (910)
T COG2352 860 LRNPYLDPLNVLQVELLKRSRQSKRG-D---------------------------PDPEVERALLLTINGIAAGLRNTG 910 (910)
T ss_pred HhccccChhHHHHHHHHHHHhhcccC-C---------------------------CCHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999964310 0 146799999999999999999999
|
|
| >PRK00009 phosphoenolpyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00398 phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
| >PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] | Back alignment and domain information |
|---|
| >PRK13655 phosphoenolpyruvate carboxylase; Provisional | Back alignment and domain information |
|---|
| >TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type | Back alignment and domain information |
|---|
| >PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C | Back alignment and domain information |
|---|
| >COG1892 Phosphoenolpyruvate carboxylase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
| >PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 | Back alignment and domain information |
|---|
| >PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional | Back alignment and domain information |
|---|
| >TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase | Back alignment and domain information |
|---|
| >TIGR01064 pyruv_kin pyruvate kinase | Back alignment and domain information |
|---|
| >PRK08187 pyruvate kinase; Validated | Back alignment and domain information |
|---|
| >PRK09206 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02623 pyruvate kinase | Back alignment and domain information |
|---|
| >PRK05826 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00300 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01588 citE citrate lyase, beta subunit | Back alignment and domain information |
|---|
| >TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | Back alignment and domain information |
|---|
| >cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors | Back alignment and domain information |
|---|
| >PRK06247 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK06354 pyruvate kinase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 965 | ||||
| 3zgb_A | 972 | Greater Efficiency Of Photosynthetic Carbon Fixatio | 0.0 | ||
| 3zge_A | 990 | Greater Efficiency Of Photosynthetic Carbon Fixatio | 0.0 | ||
| 1jqo_A | 970 | Crystal Structure Of C4-Form Phosphoenolpyruvate Ca | 0.0 | ||
| 1qb4_A | 883 | Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruva | 0.0 |
| >pdb|3ZGB|A Chain A, Greater Efficiency Of Photosynthetic Carbon Fixation Due To Single Amino Acid Substitution Length = 972 | Back alignment and structure |
|
| >pdb|3ZGE|A Chain A, Greater Efficiency Of Photosynthetic Carbon Fixation Due To Single Amino Acid Substitution Length = 990 | Back alignment and structure |
| >pdb|1JQO|A Chain A, Crystal Structure Of C4-Form Phosphoenolpyruvate Carboxylase From Maize Length = 970 | Back alignment and structure |
| >pdb|1QB4|A Chain A, Crystal Structure Of Mn(2+)-Bound Phosphoenolpyruvate Carboxylase Length = 883 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Length = 970 | Back alignment and structure |
|---|
Score = 1332 bits (3448), Expect = 0.0
Identities = 766/966 (79%), Positives = 852/966 (88%), Gaps = 3/966 (0%)
Query: 2 AARNLEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECY 61
A EK SIDAQLR L P KVSEDDKL+EYDALL+DRFL+ILQDLHG +RE VQECY
Sbjct: 6 APGPGEKHHSIDAQLRQLVPGKVSEDDKLIEYDALLVDRFLNILQDLHGPSLREFVQECY 65
Query: 62 ELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRR-IK 120
E+SA+YEGK D+ KL ELG LT L P D+I+V S HMLNLANLAEEVQIA+RRR K
Sbjct: 66 EVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEEVQIAHRRRNSK 125
Query: 121 LKKGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRS 180
LKKG F DE SATTESDIEETLKRLV ++ KSPEEVF+ALKNQTVDLVFTAHPTQS RRS
Sbjct: 126 LKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARRS 185
Query: 181 LLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGM 240
LLQK+ RIRNCLTQL AKDIT DDKQELDEALQREIQAAFRTDEIRR+ PTPQ EMR GM
Sbjct: 186 LLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGM 245
Query: 241 SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTR 300
SY HET+WKGVPKFLRRVDTALKNIGINER+PYN LI+FSSWMGGDRDGNPRVT EVTR
Sbjct: 246 SYIHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTR 305
Query: 301 DVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRD-AKHYIEFWKQI 359
DVCLLARMMAANLY QIE+LMFELSMWRCNDELR RA+ LH SS K+YIEFWKQI
Sbjct: 306 DVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQI 365
Query: 360 PPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCA 419
PPNEPYRVILG VRDKLYNTRERAR LLA+G+S+I + ++T +E+FLEPLELCY+SLC
Sbjct: 366 PPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLCD 425
Query: 420 CGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEK 479
CGD+ IADGSLLD LRQV TFGLSLV+LDIRQESERHTDVIDAIT HLGIGSYREW E+K
Sbjct: 426 CGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDK 485
Query: 480 RQEWLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLA 539
RQEWLLSELRGKRPL DLP+T+EIADV+ FHV++ELP DSFG YIISMATAPSDVLA
Sbjct: 486 RQEWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLA 545
Query: 540 VELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSG 599
VELLQREC V+QPL VVPLFE+LADL++APASV RLFS+DWY +RI GKQ+VM+GYSDSG
Sbjct: 546 VELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSG 605
Query: 600 KDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH 659
KDAGRLSAAWQLY+ QEE+ +VAK+YGVKLT+FHGRGGTVGRGGGPTHLAILSQPPDTI+
Sbjct: 606 KDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTIN 665
Query: 660 GSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIAT 719
GS+RVTVQGEVIE FGEEHLCF+TLQRF+AATLEHGMHPPVSPKPEWR LMDEMAV+AT
Sbjct: 666 GSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVAT 725
Query: 720 KEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR 779
+EYRS+V +E RFVEYFR ATPE EYGRMNIGSRP+KR+P GGI +LRAIPWIF+WTQTR
Sbjct: 726 EEYRSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTR 785
Query: 780 FHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYD 839
FHLPVWLG GAAFK I KD++N +L+EMYN WPFFRVT+DL+EMVFAKGDPGIA LYD
Sbjct: 786 FHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYD 845
Query: 840 KLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQ 899
+LLV+EEL+PFG++LR Y ET+ LLLQ+AGH+D+LEGDP+LKQ L LR+ YITTLNV Q
Sbjct: 846 ELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVFQ 905
Query: 900 AYTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAA 959
AYTLK+IRDPNF V +P LSKE+ + KP A LV+LNP SEY PGLEDT+ILTMKGIAA
Sbjct: 906 AYTLKRIRDPNFKVTPQPPLSKEFADENKP-AGLVKLNPASEYPPGLEDTLILTMKGIAA 964
Query: 960 GMQNTG 965
GMQNTG
Sbjct: 965 GMQNTG 970
|
| >1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Length = 883 | Back alignment and structure |
|---|
| >3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Length = 560 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 965 | |||
| 1jqo_A | 970 | Phosphoenolpyruvate carboxylase; beta barrel, carb | 100.0 | |
| 1jqn_A | 883 | Pepcase, PEPC, phosphoenolpyruvate carboxylase; be | 100.0 | |
| 3odm_A | 560 | Pepcase, PEPC, phosphoenolpyruvate carboxylase; be | 100.0 | |
| 1e0t_A | 470 | Pyruvate kinase, PK; phosphotransferase, glycolysi | 93.33 | |
| 1sgj_A | 284 | Citrate lyase, beta subunit; trimer, TIM barrel, s | 92.3 | |
| 1a3w_A | 500 | Pyruvate kinase; allosteric regulation, tranferase | 91.93 | |
| 3gr4_A | 550 | Pyruvate kinase isozymes M1/M2; activator, acetyla | 91.26 | |
| 1dxe_A | 256 | 2-dehydro-3-deoxy-galactarate aldolase; class II a | 91.17 | |
| 3qll_A | 316 | Citrate lyase; beta barrel; 2.45A {Yersinia pestis | 90.63 | |
| 3qtg_A | 461 | Pyruvate kinase, PK; TIM barrel, glycolysis, trans | 90.59 | |
| 3qqw_A | 332 | Putative citrate lyase; TIM beta/alpha-barrel, str | 89.98 | |
| 3r4i_A | 339 | Citrate lyase; TIM beta/alpha-barrel, structural g | 89.45 | |
| 3khd_A | 520 | Pyruvate kinase; malaria, structural genomics, str | 89.37 | |
| 3hqn_D | 499 | Pyruvate kinase, PK; TIM barrel, T-state enzyme, t | 89.24 | |
| 3qz6_A | 261 | HPCH/HPAI aldolase; structural genomics, PSI-biolo | 88.48 | |
| 3gg8_A | 511 | Pyruvate kinase; malaria, genomics, proteomics, gl | 88.29 | |
| 2v5j_A | 287 | 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l | 87.43 | |
| 3t05_A | 606 | Pyruvate kinase, PK; tetramer, glycolysis, transfe | 85.79 | |
| 1izc_A | 339 | Macrophomate synthase intermolecular diels-aldera; | 85.66 | |
| 2e28_A | 587 | Pyruvate kinase, PK; allosteric, transferase; 2.40 | 85.17 |
| >1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-257 Score=2307.05 Aligned_cols=958 Identities=78% Similarity=1.235 Sum_probs=843.1
Q ss_pred hhhhhhhHHHHhhhCCCCCCCchHhhHHHHHHHHHHH-HHHHhhhChhHHHHHHHHHHHHHhhhcCCChhHHHHHHHHhc
Q 002112 6 LEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFL-DILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLT 84 (965)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ll~~ll-evl~e~~G~~~~~~vE~iR~la~~~~~~~~~~~~~~L~~~l~ 84 (965)
.+++++++.+++.+.|++++++ ..|++|+++||.+| +||++++|+++|++||+||++|+++++.++++..++|.+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-~~Lr~dv~lLg~lLg~vl~~~~g~~~~~~ve~ir~ls~~~~r~~~~~~~~~l~~~l~ 88 (970)
T 1jqo_A 10 GEKHHSIDAQLRQLVPGKVSED-DKLIEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLT 88 (970)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred HHHHHhhhHHhhcccCCCCCcc-HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHh
Confidence 4789999999999999999996 58999999999998 999999999999999999999998744335567789999999
Q ss_pred CCCcchHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHhhc-CCCcccCcCCCcchHHHHHHHHHHHcCCCHHHHHHHhhcC
Q 002112 85 SLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKK-GDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQ 163 (965)
Q Consensus 85 ~L~~~~~~~vaRAFs~yf~L~NiAEe~hr~r~~r~~~~~-~~~~~~~~~~~~~sl~~~l~~L~~~~g~~~e~i~~~L~~~ 163 (965)
+|+++++..|+||||+||||+|||||+|++|++|..... ++.++.+..+..+||..++.+|+++.|+++++|+++|+++
T Consensus 89 ~L~~~~~~~v~RAFs~~~~L~NiAEe~~~~r~~r~~~~~~~~~~~~~~~~~~~sl~~~~~~L~~~~g~~~~~i~~~L~~~ 168 (970)
T 1jqo_A 89 GLAPADAILVASSILHMLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQ 168 (970)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------CHHHHHHHHHTTSCCCHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 999999999999999999999999999999887754322 3332222334679999999999548899999999999999
Q ss_pred ceeEeeccCCCccchhhHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccCCCCCChHHHHHHHHHHH
Q 002112 164 TVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYF 243 (965)
Q Consensus 164 ~i~pVlTAHPTEa~RrtvL~~~r~I~~~L~~~~~~~~~~~e~~~~~~~L~~~i~~LW~T~eiR~~kPtv~DE~~~~l~y~ 243 (965)
.|+|||||||||++|||||+||++|+++|.++++.++++.|+++++++|+++|+.||||||||..||||.||++||++||
T Consensus 169 ~v~pVlTAHPTE~~RrTvl~k~~~I~~lL~~l~~~~lt~~e~~~~~~~L~~~I~~lW~TdeiR~~kPtv~DE~~~gl~y~ 248 (970)
T 1jqo_A 169 TVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYI 248 (970)
T ss_dssp EEEEEEECCTTCCSCHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHHH
T ss_pred ceeeeeccCCccccHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhCChhhhccCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002112 244 HETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMF 323 (965)
Q Consensus 244 ~~~l~~avP~~~~~l~~~l~~~~~~~~~p~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~l~~~r~~al~~y~~~l~~L~~ 323 (965)
++|||++||.+|++++++|.+.+....+|...++|+|||||||||||||||||+||++|+.++|++|+++|+++|++|++
T Consensus 249 ~~sl~~avP~~~r~l~~al~~~~~~~~l~~~~~~i~fGSWiGGDRDGNP~VTaevT~~~~~~~r~~al~~Y~~~l~~L~~ 328 (970)
T 1jqo_A 249 HETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMF 328 (970)
T ss_dssp TTTTTTTHHHHHHHHHHHHHTTTCCSCCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998874324456555669999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCHHHHHHHhhhhhcchhhh-hhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCC
Q 002112 324 ELSMWRCNDELRARADGLHRSSKRDA-KHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTH 402 (965)
Q Consensus 324 ~LS~~~~s~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~ 402 (965)
+||+++||++|++.++...+..++.. ++|..++..++++||||++|..|++||.+|+.++...+.+.....+....|.+
T Consensus 329 eLS~s~~s~eL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EPYR~~L~~i~~rL~~T~~~~~~~l~~~~~~~~~~~~Y~~ 408 (970)
T 1jqo_A 329 ELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTS 408 (970)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHCCCCCTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCCS
T ss_pred HcCCCCCCHHHHHHHHHHHhhcccchhcccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccCCCC
Confidence 99999999999987765433333221 23333444556789999999999999999998766544332211112347999
Q ss_pred hHHhhhHHHHHHHHHHhcCCccccchHHHHHHHHHHhcCCccccccccccchHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002112 403 VEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQE 482 (965)
Q Consensus 403 ~~ell~dL~~i~~SL~~~~~~~~a~~~L~~lir~v~~FGfhla~LDiRQ~S~~H~~a~~el~~~~g~~~Y~~l~E~~r~~ 482 (965)
++||++||..|++||++||+..+|+|.|.++||+|++|||||++|||||||++|++|++||++++|+++|.+|||++|++
T Consensus 409 ~~ell~dL~~i~~SL~~~g~~~iA~g~L~~lir~V~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~ 488 (970)
T 1jqo_A 409 IEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQE 488 (970)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCTTTTTHHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCChhhhhhhHHHHHHHHHHhCeeccccchhhcchHHHHHHHHHHHHcCCCCcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCCh
Q 002112 483 WLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKL 562 (965)
Q Consensus 483 ~L~~eL~~~rpl~~~~~~~s~~~~e~l~~f~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi 562 (965)
||.+||.++||++++..++|++++++|++|++++++|+++|++||||||+++||||+|++|+|++|+.++|+|||||||+
T Consensus 489 ~L~~eL~~~rpL~~~~~~~s~~~~evL~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi 568 (970)
T 1jqo_A 489 WLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERL 568 (970)
T ss_dssp HHHHHHHCCSCCCCTTCCCCHHHHHHHHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSH
T ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCC
Q 002112 563 ADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRG 642 (965)
Q Consensus 563 ~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRG 642 (965)
+||+||+.||++||++|+||+|++++|||||||||||||||+++|+|+||+||++|+++|++|||+++||||||||||||
T Consensus 569 ~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRG 648 (970)
T 1jqo_A 569 ADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRG 648 (970)
T ss_dssp HHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGT
T ss_pred HHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCcccCceeeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 002112 643 GGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEY 722 (965)
Q Consensus 643 GGPt~~ailaqP~gs~~g~ir~TeQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~~Y 722 (965)
|||+|+||+||||||++|.+|+|||||||++|||+|++|.||||++++|++++++.+++.++++|+++|++||+.|+++|
T Consensus 649 Ggp~~~ailaqP~gsv~G~ir~TeQGEvI~~kYg~p~~a~~nLe~~~aA~l~a~l~~~~~~~~~~~~~m~~la~~s~~~Y 728 (970)
T 1jqo_A 649 GGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEY 728 (970)
T ss_dssp CCCHHHHHHTSCTTSCTTEEEEEEEHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHcCCCcccCCceEEEeecHHHHHhcCChHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987666677899999999999999999
Q ss_pred HHhhhcCCchHHHHHhhCchhHhhhCCCCCCCCccCCCCCCCCccccchhhhhhhhhccccchhhHHHHHHHHHHhCCCc
Q 002112 723 RSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKN 802 (965)
Q Consensus 723 r~lv~~~p~F~~yF~~aTPi~ei~~lnIGSRPakR~~~~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAL~~~~~~~~~~ 802 (965)
|++||++|+|++||+++||+.||+.|||||||+||+++++++|||||||||||+|+|++||||||+|+||+.++++++++
T Consensus 729 r~lv~~~p~Fv~yF~~aTP~~ei~~LnIGSRPa~R~~~~~i~~LRAIPWvfsWtQ~R~~lP~w~G~GsAl~~~~~~~~~~ 808 (970)
T 1jqo_A 729 RSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRN 808 (970)
T ss_dssp HHHHTTCTTHHHHHHHHSCCGGGGGGCCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCTTH
T ss_pred HHHHhcCCCHHHHHHHhChHHHHHhCccCCCCccCCCCCCcccccccchhhHHHhccCCcchhhhHHHHHHHHHHcCchh
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999988767
Q ss_pred HHHHHHHHhhChhHHHHHHHHHHHHHhcCHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHhCCCCccCCCchHH
Q 002112 803 LHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLK 882 (965)
Q Consensus 803 ~~~L~~my~~wpfF~~~ldn~em~LaKaD~~Ia~~Y~~l~~d~~~~~i~~~i~~E~~~T~~~vl~itg~~~Ll~~~p~l~ 882 (965)
++.|++||++||||+++|||++|+|+|+|+.||++|+++++|++++.||++|++||++|+++|++|||+++||+++|+|+
T Consensus 809 l~~L~~my~~wPfF~t~ldn~eM~laK~Dl~iA~~Y~~ll~d~~~~~i~~~i~~E~~~T~~~ll~itg~~~LL~~~p~l~ 888 (970)
T 1jqo_A 809 FQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLK 888 (970)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHHHH
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccChHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHhcCCCCCCccCCcchhhhhhccchhhhhhhcCCCCCCCcchhHHHHHHHHHHHhhhc
Q 002112 883 QRLRLRDAYITTLNVCQAYTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQ 962 (965)
Q Consensus 883 ~si~~R~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~TingIAaGlr 962 (965)
+||++|||||||||++||+||||+|+.+...++.|+.+++++++. +..||+.+||+..+++.++++|++||||||||||
T Consensus 889 ~si~lR~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~lllTInGIAAGlr 967 (970)
T 1jqo_A 889 QGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFADEN-KPAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQ 967 (970)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCCCCCSCC--------CTTTTTSSSCSSCTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhHHhhHHHHHHHHHHHHHHhcCCCCCccccccccccccc-chhhhhccCcccccchHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999973311111222333444443 4459999999999999999999999999999999
Q ss_pred cCC
Q 002112 963 NTG 965 (965)
Q Consensus 963 nTG 965 (965)
|||
T Consensus 968 NTG 970 (970)
T 1jqo_A 968 NTG 970 (970)
T ss_dssp CCC
T ss_pred cCC
Confidence 999
|
| >1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A | Back alignment and structure |
|---|
| >3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} | Back alignment and structure |
|---|
| >1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A | Back alignment and structure |
|---|
| >1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 | Back alignment and structure |
|---|
| >1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A | Back alignment and structure |
|---|
| >3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... | Back alignment and structure |
|---|
| >1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A | Back alignment and structure |
|---|
| >3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} | Back alignment and structure |
|---|
| >3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
| >3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} | Back alignment and structure |
|---|
| >3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
| >3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* | Back alignment and structure |
|---|
| >3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 | Back alignment and structure |
|---|
| >3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A | Back alignment and structure |
|---|
| >2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A | Back alignment and structure |
|---|
| >3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* | Back alignment and structure |
|---|
| >1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 | Back alignment and structure |
|---|
| >2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 965 | ||||
| d1jqoa_ | 936 | c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Esc | 0.0 | |
| d1jqna_ | 880 | c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Esc | 0.0 |
| >d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Length = 936 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate carboxylase domain: Phosphoenolpyruvate carboxylase species: Escherichia coli [TaxId: 562]
Score = 1121 bits (2900), Expect = 0.0
Identities = 746/937 (79%), Positives = 833/937 (88%), Gaps = 3/937 (0%)
Query: 31 VEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGD 90
+EYDALL+DRFL+ILQDLHG +RE VQECYE+SA+YEGK D+ KL ELG LT L P D
Sbjct: 1 IEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPAD 60
Query: 91 SIVVTKSFSHMLNLANLAEEVQIAYRRRI-KLKKGDFVDENSATTESDIEETLKRLVVQL 149
+I+V S HMLNLANLAEEVQIA+RRR KLKKG F DE SATTESDIEETLKRLV ++
Sbjct: 61 AILVASSILHMLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEV 120
Query: 150 KKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELD 209
KSPEEVF+ALKNQTVDLVFTAHPTQS RRSLLQK+ RIRNCLTQL AKDIT DDKQELD
Sbjct: 121 GKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELD 180
Query: 210 EALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINE 269
EALQREIQAAFRTDEIRR+ PTPQ EMR GMSY HET+WKGVPKFLRRVDTALKNIGINE
Sbjct: 181 EALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINE 240
Query: 270 RVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWR 329
R+PYN LI+FSSWMGGDRDGNPRVT EVTRDVCLLARMMAANLY QIE+LMFELSMWR
Sbjct: 241 RLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWR 300
Query: 330 CNDELRARADGLHRSS-KRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLA 388
CNDELR RA+ LH SS + K+YIEFWKQIPPNEPYRVILG VRDKLYNTRERAR LLA
Sbjct: 301 CNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLA 360
Query: 389 NGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLD 448
+G+S+I + ++T +E+FLEPLELCY+SLC CGD+ IADGSLLD LRQV TFGLSLV+LD
Sbjct: 361 SGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLD 420
Query: 449 IRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADV 508
IRQESERHTDVIDAIT HLGIGSYREW E+KRQEWLLSELRGKRPL DLP+T+EIADV
Sbjct: 421 IRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADV 480
Query: 509 LDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAA 568
+ FHV++ELP DSFG YIISMATAPSDVLAVELLQREC V+QPL VVPLFE+LADL++A
Sbjct: 481 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSA 540
Query: 569 PASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVK 628
PASV RLFS+DWY +RI GKQ+VM+GYSDSGKDAGRLSAAWQLY+ QEE+ +VAK+YGVK
Sbjct: 541 PASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVK 600
Query: 629 LTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRF 688
LT+FHGRGGTVGRGGGPTHLAILSQPPDTI+GS+RVTVQGEVIE FGEEHLCF+TLQRF
Sbjct: 601 LTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRF 660
Query: 689 SAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRM 748
+AATLEHGMHPPVSPKPEWR LMDEMAV+AT+EYRS+V +E RFVEYFR ATPE EYGRM
Sbjct: 661 TAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRM 720
Query: 749 NIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQE 808
NIGSRP+KR+P GGI +LRAIPWIF+WTQTRFHLPVWLG GAAFK I KD++N +L+E
Sbjct: 721 NIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKE 780
Query: 809 MYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQV 868
MYN WPFFRVT+DL+EMVFAKGDPGIA LYD+LLV+EEL+PFG++LR Y ET+ LLLQ+
Sbjct: 781 MYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQI 840
Query: 869 AGHRDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKQIRDPNFHVKVRPHLSKEYMESRK 928
AGH+D+LEGDP+LKQ L LR+ YITTLNV QAYTLK+IRDPNF V +P LSKE+ + K
Sbjct: 841 AGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFADENK 900
Query: 929 PAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQNTG 965
P A LV+LNP SEY PGLEDT+ILTMKGIAAGMQNTG
Sbjct: 901 P-AGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG 936
|
| >d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Length = 880 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 965 | |||
| d1jqoa_ | 936 | Phosphoenolpyruvate carboxylase {Escherichia coli | 100.0 | |
| d1jqna_ | 880 | Phosphoenolpyruvate carboxylase {Escherichia coli | 100.0 | |
| d1sgja_ | 231 | Citrate lyase, beta subunit {Deinococcus radiodura | 90.77 | |
| d1u5ha_ | 223 | Citrate lyase, beta subunit {Mycobacterium tubercu | 83.01 | |
| d1dxea_ | 253 | 2-dehydro-3-deoxy-galactarate aldolase {Escherichi | 82.96 | |
| d1izca_ | 299 | Macrophomate synthase {Macrophoma commelinae [TaxI | 80.5 |
| >d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate carboxylase domain: Phosphoenolpyruvate carboxylase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.5e-255 Score=2316.43 Aligned_cols=934 Identities=79% Similarity=1.268 Sum_probs=843.9
Q ss_pred hHHHHHHHHHHHHHHHhhhChhHHHHHHHHHHHHHhhhcCCChhHHHHHHHHhcCCCcchHHHHHHHHHHHhhhhcHHHH
Q 002112 31 VEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLANLAEE 110 (965)
Q Consensus 31 l~~~~~ll~~llevl~e~~G~~~~~~vE~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~yf~L~NiAEe 110 (965)
++.|+++||+||+||++|+|+++|++||+||.+|++++..++++..++|.+.|++|+++++..|+||||+||+|+|||||
T Consensus 1 ~~~D~~llg~ll~vi~e~~G~~~~~~vE~iR~ls~~~r~~~~~~~~~~L~~~l~~L~~~~~~~v~RAFs~~f~L~NiAE~ 80 (936)
T d1jqoa_ 1 IEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEE 80 (936)
T ss_dssp CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999988777788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcccCcCCCcchHHHHHHHHHHHcCCCHHHHHHHhhcCceeEeeccCCCccchhhHHHHHHHHH
Q 002112 111 VQIAYRRRIKLK-KGDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQKHGRIR 189 (965)
Q Consensus 111 ~hr~r~~r~~~~-~~~~~~~~~~~~~~sl~~~l~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrtvL~~~r~I~ 189 (965)
+|++|++|..+. .+...+.+..+.++|++++|++|+++.|+++++|++.|+++.|+|||||||||++|||||+||++|+
T Consensus 81 ~~~~rr~R~~~~~~~~~~~~g~~~~~~sl~~al~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrTvL~~~r~I~ 160 (936)
T d1jqoa_ 81 VQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIR 160 (936)
T ss_dssp HHHHHHHHCC-----------------CHHHHHHHHHTTSCCCHHHHHHHHHTCEEEEEEECCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccCccccHHHHHHHHHHhcCCCHHHHHHHHhcCceeEEeccCCCCCchHHHHHHHHHHH
Confidence 999998886543 2333344455788999999999954569999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccCCCCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCCC
Q 002112 190 NCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINE 269 (965)
Q Consensus 190 ~~L~~~~~~~~~~~e~~~~~~~L~~~i~~LW~T~eiR~~kPtv~DE~~~~l~y~~~~l~~avP~~~~~l~~~l~~~~~~~ 269 (965)
.+|.++++..+++.|+++++++|+++|+.||||+++|..||||.||++||++||+++||++||.+|++|++++.+++.+.
T Consensus 161 ~lL~~ld~~~lt~~e~~~~~~~L~~~I~~LW~T~eiR~~KPtv~DE~~~~l~y~~~sl~~avP~l~~~l~~al~~~~~~~ 240 (936)
T d1jqoa_ 161 NCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINE 240 (936)
T ss_dssp HHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHhhcccCChHHHHHHHHHHHHHHHHHhCccccccCCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCCCCHHHHHHHhhhhhcchhhh
Q 002112 270 RVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRSSKRDA 349 (965)
Q Consensus 270 ~~p~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~l~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~~~~~~~~~~~~ 349 (965)
..|..++||+|||||||||||||||||+||++|+.++|+.++++|.+++++|.++||++.++.++........+......
T Consensus 241 ~~~~~~~~irfGSWiGGDRDGNP~VTaevT~~~l~~~r~~al~~Y~~~l~~L~~~LS~s~~~~~~~~~~~~l~~~~~~~~ 320 (936)
T d1jqoa_ 241 RLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKV 320 (936)
T ss_dssp CCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_pred ccccCCCceeeeeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccchhhhhHHHHHHHhhhhhh
Confidence 56777899999999999999999999999999999999999999999999999999999888887665443322221111
Q ss_pred -hhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCChHHhhhHHHHHHHHHHhcCCccccch
Q 002112 350 -KHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRPIADG 428 (965)
Q Consensus 350 -~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~SL~~~~~~~~a~~ 428 (965)
..+..+....+++||||++|..|++||.+|..+....+.+.........+|.+++||++||..|++||+++|+..+|+|
T Consensus 321 ~~~~~~~~~~~~~~EPyR~~L~~i~~RL~~t~~~~~~~~~~~~~~~~~~~~Y~s~~ell~dL~~i~~SL~~~g~~~la~~ 400 (936)
T d1jqoa_ 321 TKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADG 400 (936)
T ss_dssp CTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCCSHHHHHHHHHHHHHHHHHTSCCTTTTT
T ss_pred HHHhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCcchhhhh
Confidence 1112223344678999999999999999999887766543332333455899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCccccccccccchHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q 002112 429 SLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEEIADV 508 (965)
Q Consensus 429 ~L~~lir~v~~FGfhla~LDiRQ~S~~H~~a~~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~~~e~ 508 (965)
.|.+||++|++|||||++|||||||++|++|++||++++|+++|.+|+|++|+++|.++|.++||+.++..+.+++++++
T Consensus 401 ~L~~Lir~V~~FGfhLa~LDIRQ~S~~H~~ai~el~~~~g~~~y~~~~e~~r~~~L~~eL~~~rpl~~~~~~~~~e~~~~ 480 (936)
T d1jqoa_ 401 SLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADV 480 (936)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHHHHHHHHHHCCSCCCCTTCCCCHHHHHH
T ss_pred hhHHHHHHHHHccccccchhhhhhhHHHHHHHHHHHHhcCCCCcccCChHHHHHHHHHHhcCCCCCCCcccccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCe
Q 002112 509 LDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGK 588 (965)
Q Consensus 509 l~~f~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~ 588 (965)
+++|++++++++++|++||||||+++||||+|++|+|++|+.++|+||||||||+||+|||.||++||++|+||+||+++
T Consensus 481 l~~~~~i~~~g~~aig~YIISmt~s~sDvL~V~lLak~~g~~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~ 560 (936)
T d1jqoa_ 481 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGK 560 (936)
T ss_dssp HHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSE
T ss_pred HHHHHHHHhcCccccccchhccCCcHHHHHHHHHHHHHcCCCCCCCcccccccHHHHHhhHHHHHHHHhChHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhhhhhcCCCCcccCceeeeccc
Q 002112 589 QEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQG 668 (965)
Q Consensus 589 QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~ailaqP~gs~~g~ir~TeQG 668 (965)
||||||||||||||||+||+|+||+||++|+++|++|||+++|||||||||||||||+|+||+|||+||++|+||+||||
T Consensus 561 QeVMlGYSDS~KDgG~laa~W~ly~Aq~~L~~v~~~~gv~l~~FHGRGGsvgRGGGPt~~ai~sqP~gs~~g~ir~TeQG 640 (936)
T d1jqoa_ 561 QQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQG 640 (936)
T ss_dssp EEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHHHHHTSCTTSCTTEEEEEEEH
T ss_pred eEEEeccccccchhHHHHHHHHHHHHHHHHHHHHHHcCceEEEEecCCCccccCCCChHHHHHhCCCCCcCCceEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcCChhHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCchHHHHHhhCchhHhhhC
Q 002112 669 EVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRM 748 (965)
Q Consensus 669 EvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~aTPi~ei~~l 748 (965)
|||++|||+|.+|.||||++++|++++++.+++.+.++|+++|++||+.|+++||++|+++|+|++||+++||++||+.|
T Consensus 641 EvIs~ky~~~~~a~~~Le~~~aa~l~~~~~~~~~~~~~~~~~~~~ls~~s~~~Yr~lv~~~p~F~~yf~~aTPi~ei~~l 720 (936)
T d1jqoa_ 641 EVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRM 720 (936)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSCCGGGGGG
T ss_pred eehhhhccCHHHHHHHHHHHHHHHHhhccCCCCCCCchHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHhhHHHHhhc
Confidence 99999999999999999999999999999888888899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCCCCCccccchhhhhhhhhccccchhhHHHHHHHHHHhCCCcHHHHHHHHhhChhHHHHHHHHHHHHH
Q 002112 749 NIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVEMVFA 828 (965)
Q Consensus 749 nIGSRPakR~~~~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAL~~~~~~~~~~~~~L~~my~~wpfF~~~ldn~em~La 828 (965)
|||||||||+++++++|||||||||||||+|+|+|||||+|+||++++++++++++.||+||++||||+++|||++|+|+
T Consensus 721 nIGSRPa~R~~~~~l~dLRAIPWVfsWtQ~R~~lPgWyG~GsAl~~~~~~~~~~~~~l~~my~~wpfF~~~l~n~~m~la 800 (936)
T d1jqoa_ 721 NIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFA 800 (936)
T ss_dssp CCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCTTHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred cCCCCCccCCCCCCccccCcCchHHHHHHhhccchHHhhhHHHHHHHHhcCcccHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999998877899999999999999999999999999
Q ss_pred hcCHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHhCCCCccCCCchHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 002112 829 KGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKQIRD 908 (965)
Q Consensus 829 KaD~~Ia~~Y~~l~~d~~~~~i~~~i~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~~R~pyvdpLn~lQvelL~r~R~ 908 (965)
||||.||++|+++++|+++++||++|++||++|+++|++|||+++||+++|++++||++|||||||||++||+||+|+|+
T Consensus 801 K~d~~ia~~Y~~l~~d~~~~~~~~~i~~E~~~t~~~~l~it~~~~Ll~~~p~l~~si~~R~py~~pL~~~Qv~lL~r~R~ 880 (936)
T d1jqoa_ 801 KGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRD 880 (936)
T ss_dssp TCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhCHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccChHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCccCCcchhhhhhccchhhhhhhcCCCCCCCcchhHHHHHHHHHHHhhhccCC
Q 002112 909 PNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQNTG 965 (965)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~TingIAaGlrnTG 965 (965)
.+.+....+...++. .......+++..+|..+.++.+.++|++|||||||||||||
T Consensus 881 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~tingIAaGlrnTG 936 (936)
T d1jqoa_ 881 PNFKVTPQPPLSKEF-ADENKPAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG 936 (936)
T ss_dssp TTCCCCCCCCCSCC--------CTTTTTSSSCSSCTTHHHHHHHHHHHHHHHHTCCC
T ss_pred cccccccccchhhhc-ccccchhhhhhcccccccchhHHHHHHHHHHHHHHHhccCC
Confidence 542211111111110 00011235667777777889999999999999999999999
|
| >d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} | Back information, alignment and structure |
|---|