Citrus Sinensis ID: 002162
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 958 | 2.2.26 [Sep-21-2011] | |||||||
| P34098 | 1010 | Lysosomal alpha-mannosida | yes | no | 0.935 | 0.887 | 0.385 | 0.0 | |
| Q8VHC8 | 1007 | Lysosomal alpha-mannosida | yes | no | 0.920 | 0.875 | 0.396 | 1e-180 | |
| O00754 | 1011 | Lysosomal alpha-mannosida | yes | no | 0.931 | 0.882 | 0.393 | 1e-178 | |
| Q60HE9 | 1012 | Lysosomal alpha-mannosida | N/A | no | 0.931 | 0.881 | 0.391 | 1e-178 | |
| O09159 | 1013 | Lysosomal alpha-mannosida | yes | no | 0.933 | 0.882 | 0.388 | 1e-177 | |
| O46432 | 1007 | Lysosomal alpha-mannosida | N/A | no | 0.927 | 0.882 | 0.394 | 1e-177 | |
| Q29451 | 999 | Lysosomal alpha-mannosida | yes | no | 0.919 | 0.881 | 0.388 | 1e-175 | |
| O54782 | 1018 | Epididymis-specific alpha | no | no | 0.909 | 0.855 | 0.269 | 1e-77 | |
| P27046 | 1150 | Alpha-mannosidase 2 OS=Mu | no | no | 0.739 | 0.615 | 0.278 | 5e-75 | |
| Q16706 | 1144 | Alpha-mannosidase 2 OS=Ho | no | no | 0.743 | 0.622 | 0.281 | 8e-75 |
| >sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/975 (38%), Positives = 539/975 (55%), Gaps = 79/975 (8%)
Query: 16 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGG 75
A VQ LD+ I L+A+ RKFIYVE AFFQRWW +QS +QN+VK LV SGQLE INGG
Sbjct: 74 AGVQYTLDTAITCLLANPERKFIYVEIAFFQRWWDEQSTTMQNIVKGLVESGQLEFINGG 133
Query: 76 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDF 135
CM+DEA +Y D IDQ TLGH+++ E F V P+IGW IDPFGHSA QA + ++GFD
Sbjct: 134 YCMNDEATTYYDDTIDQMTLGHQFLWENFGVMPKIGWHIDPFGHSATQARIF-GQLGFDA 192
Query: 136 LFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTS 195
R+DYQD R+ K +E +WR+++S + Q+ T + Y P D F FE GD
Sbjct: 193 FIIGRMDYQDIEARLENKQMEFMWRSTQSTPEN-QVFTSVLRAMYCTP-DGFNFEQGD-D 249
Query: 196 PIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKF 255
PI QDD NLFD NV R F A+ A RTN+++ G DF Y A +++ +DK
Sbjct: 250 PI-QDDPNLFDNNVDSRAEQFTQVALEYATHYRTNNVLIPFGCDFAYLNAQMYYKNIDKL 308
Query: 256 IHYVNQDGR---VNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRP 312
I ++N + +N LYSTPS+YIDA AN W +KTDD FPYAD E +YWTGYF SRP
Sbjct: 309 IAHINSNPDKYGLNLLYSTPSIYIDAVNDANLVWEVKTDDLFPYADNEFSYWTGYFVSRP 368
Query: 313 ALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLAD-------ALALVQHHDAVSGTEK 365
ALKGYVR +A Q+ ++ L D + + QHHDAVSGTE+
Sbjct: 369 ALKGYVRQNNALLHVVEQMLVTSSNLMPSSRSEQLVDDIVIMREVMGIAQHHDAVSGTEQ 428
Query: 366 QHVADDYAKRLSIGYT---EAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPP 422
QHVADDYA+RLSIG E V +L SK+ P +F CPLLN S CP
Sbjct: 429 QHVADDYAERLSIGNCASLETINTVVGTLLTANGNSKSAAATPTISF--CPLLNQSICPA 486
Query: 423 SEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSL 482
++ LSSG S+ V++YN L W R + +RIP+ NVTV S I SQ+
Sbjct: 487 TD-PLSSGTSVPVLIYNSLSWTRNEPVRIPIPIANVTVTSSSNGSITSQV---------- 535
Query: 483 RNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYII-SSAKQAASHSGMRTV------- 534
+ ++ L F A++PPLG++TYII S+A + + +
Sbjct: 536 ------------NQINGTFILEFLATIPPLGYSTYIITSTASDFVEPNSIPAIIIQDEII 583
Query: 535 ------YKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDD 588
++ ND I + + + +S + ++ N + V + Q YI+Y
Sbjct: 584 VSGGGKINEKVSYNDPIILENDYINVQFSSQDGSILSITNKTSGVTSSITQEYIWYNPSV 643
Query: 589 GSKD-LQPSGAYIFRP--NGTYPIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKG 645
G+ D Q SGAYIFRP + YP S +I+RG + + + + + Q R+Y
Sbjct: 644 GNDDSAQCSGAYIFRPVEDFAYPYN-NATPSVSIIRGEISSSIRRFWSNEMVQTFRLYSN 702
Query: 646 KDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLE 705
DH E+E +GPI I DGIGKE+V++ T+ +++++T+Y+DS G + +RI +YR WNL
Sbjct: 703 ADHLEVEEIIGPIDISDGIGKEIVSRYTTTLVTDQTWYSDSQGMEMQKRITNYRPSWNLT 762
Query: 706 VNQPIAGNYYPVNLGIYMKD--NSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRG 763
V QP +GNY PVN Y++D S + +I+ DRS G +S+ DGQL++M+HRR + DD RG
Sbjct: 763 VVQPTSGNYVPVNAIAYIQDPNQSLQFTIVTDRSRGCASLRDGQLDMMMHRRTLKDDGRG 822
Query: 764 VSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAF--TEQDG 821
V + +NE+ + + + D A R + P L F T+Q
Sbjct: 823 VGQPMNESTQI--------VTTSKLIFHDISSYAQSHYRPAALSLSHPLLPMFTTTQQSS 874
Query: 822 DHWANSHLATYSAMDTTYVLPDNVALITLQELDS--GKILLRLAHLYEIE-EDTDLSVMS 878
+ W + + YS + + LP+ + + TLQ LD+ ILLR+ ++Y+I+ +D+
Sbjct: 875 NDWNSQYQGVYSPLTSASPLPNGLKIQTLQWLDNQDNTILLRIENIYQIDGQDSQDPQTI 934
Query: 879 SVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWR-VEGSSKEQPTAVRGSPVDPAK 937
+++L +F I+ TEMNL+ Q+ + + RL W+ V+G + + ++
Sbjct: 935 TLDLSTIFSTITITSATEMNLTGVQKLSNL--SRLKWKTVDGKNYDHKSSSSTKEDSSNG 992
Query: 938 LVVELAPMEIRTFVI 952
V +PM+IRTF+I
Sbjct: 993 FVFTFSPMQIRTFII 1007
|
Dictyostelium discoideum (taxid: 44689) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 | Back alignment and function description |
|---|
| >sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|O54782|MA2B2_MOUSE Epididymis-specific alpha-mannosidase OS=Mus musculus GN=Man2b2 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 958 | ||||||
| 255540059 | 1012 | lysosomal alpha-mannosidase, putative [R | 0.983 | 0.930 | 0.777 | 0.0 | |
| 224122176 | 1012 | predicted protein [Populus trichocarpa] | 0.979 | 0.926 | 0.774 | 0.0 | |
| 359491464 | 1016 | PREDICTED: lysosomal alpha-mannosidase [ | 0.979 | 0.923 | 0.760 | 0.0 | |
| 225456481 | 1009 | PREDICTED: lysosomal alpha-mannosidase [ | 0.978 | 0.928 | 0.737 | 0.0 | |
| 356508869 | 1011 | PREDICTED: lysosomal alpha-mannosidase-l | 0.978 | 0.926 | 0.743 | 0.0 | |
| 297734249 | 1048 | unnamed protein product [Vitis vinifera] | 0.975 | 0.892 | 0.744 | 0.0 | |
| 440546588 | 1024 | alpha-mannosidase [Prunus persica] | 0.982 | 0.918 | 0.734 | 0.0 | |
| 359488553 | 1025 | PREDICTED: lysosomal alpha-mannosidase-l | 0.985 | 0.920 | 0.736 | 0.0 | |
| 356516487 | 1012 | PREDICTED: lysosomal alpha-mannosidase-l | 0.979 | 0.926 | 0.730 | 0.0 | |
| 357464941 | 1016 | Lysosomal alpha-mannosidase [Medicago tr | 0.979 | 0.923 | 0.729 | 0.0 |
| >gi|255540059|ref|XP_002511094.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223550209|gb|EEF51696.1| lysosomal alpha-mannosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1585 bits (4104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/947 (77%), Positives = 839/947 (88%), Gaps = 5/947 (0%)
Query: 13 MQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELI 72
+Q ACVQN+LDSL+PAL+ADKNRKFIYVEQAFFQRWW +QSEEVQ +VK+LV+SGQLELI
Sbjct: 66 IQGACVQNILDSLVPALLADKNRKFIYVEQAFFQRWWNEQSEEVQKIVKKLVSSGQLELI 125
Query: 73 NGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG 132
NGGMCMHDEAA HYIDMIDQTTLGH++IK++FN+TPRIGWQIDPFGHSAVQ YLL AEVG
Sbjct: 126 NGGMCMHDEAATHYIDMIDQTTLGHKFIKQEFNLTPRIGWQIDPFGHSAVQGYLLGAEVG 185
Query: 133 FDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVG 192
FD +FFARIDYQDR+KR +EK+LEVVWR SKSLGSSAQI G PKNYEPPSDNFYFEV
Sbjct: 186 FDSIFFARIDYQDRSKRKDEKSLEVVWRGSKSLGSSAQIFAGAFPKNYEPPSDNFYFEVN 245
Query: 193 DTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQM 252
D SPIVQDD+NLFDYNVP+RVNDFVSAA++QANITRTNHIMWTMGTDFKYQYAH+WF+QM
Sbjct: 246 DESPIVQDDINLFDYNVPDRVNDFVSAAMSQANITRTNHIMWTMGTDFKYQYAHSWFKQM 305
Query: 253 DKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRP 312
DKFIHYVNQDGRVNA YSTPS+Y DAKYAANESWPLKTDD+FPYAD NAYWTGYFTSRP
Sbjct: 306 DKFIHYVNQDGRVNAFYSTPSIYTDAKYAANESWPLKTDDYFPYADDVNAYWTGYFTSRP 365
Query: 313 ALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDY 372
A+KGYVRT+S YYLAARQLEF KGR++ G +TDSLA+ALA+ QHHDAV+GTEKQHVADDY
Sbjct: 366 AIKGYVRTISGYYLAARQLEFLKGRSKAGSNTDSLANALAVAQHHDAVTGTEKQHVADDY 425
Query: 373 AKRLSIGYTEAEKVVAASLACLTEFS-KNGCVNPITNFQQCPLLNISYCPPSEVDLSSGK 431
AKRLSIGY EAEKVV SL+C+ E + C N FQQCPLLNISYCP SEVDLS+GK
Sbjct: 426 AKRLSIGYKEAEKVVGESLSCIAESKLETDCTNTTNKFQQCPLLNISYCPASEVDLSNGK 485
Query: 432 SLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYL 491
SLVVVVYN LGWKRE++IR+PVINENV VKDS+G IESQLLPLL S+S+RN +S AYL
Sbjct: 486 SLVVVVYNSLGWKRENVIRVPVINENVNVKDSEGNEIESQLLPLLDASISVRNYHSMAYL 545
Query: 492 GKSTNVTPSYWLAFSASVPPLGFNTYIISS----AKQAASHSGMRTVYKSQIRQNDTIEV 547
G S NVTP YWLAFS SVPPLGF+TYII+S AK+ A+ S +TV+K++ Q TIE+
Sbjct: 546 GSSPNVTPKYWLAFSVSVPPLGFSTYIIASAPPTAKRTAAFSEAQTVHKTRATQYGTIEI 605
Query: 548 GPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY 607
GPGNLKL+YSGK K+ +YIN +TSV K +EQSY YY GDDGSKDLQ SGAYIFRPNGTY
Sbjct: 606 GPGNLKLIYSGKDGKIAQYINRRTSVKKSVEQSYSYYAGDDGSKDLQASGAYIFRPNGTY 665
Query: 608 PIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKE 667
PI +GQ++FT+LRGPLLDE+H RIN WIYQ+TRVYKGK+HAE+EFTVGPIPIDDGIGKE
Sbjct: 666 PINSKGQVAFTVLRGPLLDEIHHRINSWIYQITRVYKGKEHAEVEFTVGPIPIDDGIGKE 725
Query: 668 VVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNS 727
VVT+IT+ + +NKTFYTDSSGRDF+ERIRDYRKDW+L+VNQP+AGNYYP+NLGIYMKDNS
Sbjct: 726 VVTKITTTLKNNKTFYTDSSGRDFLERIRDYRKDWDLQVNQPVAGNYYPINLGIYMKDNS 785
Query: 728 SELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKY 787
SELSILVDRSVGGSSI DGQLELMLHRRLV DD+RGV EALNETVCV DKC GLTI+GKY
Sbjct: 786 SELSILVDRSVGGSSIVDGQLELMLHRRLVIDDSRGVGEALNETVCVLDKCTGLTIVGKY 845
Query: 788 YLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVAL 847
YLRIDP+ E AKWRRS+GQEIYSPFLLAF EQD + W SH+ T+SAM ++YVLPDNVA+
Sbjct: 846 YLRIDPLSEGAKWRRSYGQEIYSPFLLAFAEQDRESWTKSHVTTFSAMGSSYVLPDNVAI 905
Query: 848 ITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAV 907
+TLQELD+GK L+R AHLYEI ED D+S+M+SVELKKVFP KKI+KVTE +L+ANQERA
Sbjct: 906 LTLQELDNGKTLIRFAHLYEIGEDEDMSIMASVELKKVFPSKKINKVTETSLTANQERAE 965
Query: 908 MEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEF 954
M++KRLVW EG S ++ RG+P+DP KLVVELAPMEIRTF+++F
Sbjct: 966 MDRKRLVWNAEGFSGDENKVARGAPIDPVKLVVELAPMEIRTFLVDF 1012
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122176|ref|XP_002318770.1| predicted protein [Populus trichocarpa] gi|222859443|gb|EEE96990.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359491464|ref|XP_002277164.2| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225456481|ref|XP_002280858.1| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] gi|297734505|emb|CBI15752.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356508869|ref|XP_003523176.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297734249|emb|CBI15496.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] | Back alignment and taxonomy information |
|---|
| >gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356516487|ref|XP_003526925.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357464941|ref|XP_003602752.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355491800|gb|AES73003.1| Lysosomal alpha-mannosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 958 | ||||||
| TAIR|locus:2159143 | 1024 | AT5G13980 [Arabidopsis thalian | 0.977 | 0.914 | 0.667 | 0.0 | |
| TAIR|locus:2090817 | 1019 | AT3G26720 [Arabidopsis thalian | 0.972 | 0.914 | 0.643 | 0.0 | |
| TAIR|locus:2156857 | 1047 | AT5G66150 [Arabidopsis thalian | 0.620 | 0.567 | 0.563 | 3.7e-293 | |
| MGI|MGI:107286 | 1013 | Man2b1 "mannosidase 2, alpha B | 0.466 | 0.441 | 0.427 | 9.1e-167 | |
| UNIPROTKB|G5E928 | 1010 | MAN2B1 "Mannosidase, alpha, cl | 0.466 | 0.442 | 0.434 | 4.5e-165 | |
| UNIPROTKB|O00754 | 1011 | MAN2B1 "Lysosomal alpha-mannos | 0.466 | 0.442 | 0.435 | 9.3e-165 | |
| UNIPROTKB|F1PKB2 | 1007 | MAN2B1 "Uncharacterized protei | 0.488 | 0.464 | 0.428 | 3.1e-164 | |
| RGD|3039 | 1009 | Man2b1 "mannosidase, alpha, cl | 0.466 | 0.443 | 0.424 | 1.1e-163 | |
| DICTYBASE|DDB_G0292206 | 1010 | manA "alpha-mannosidase" [Dict | 0.949 | 0.900 | 0.391 | 7.3e-162 | |
| UNIPROTKB|F1MMX7 | 999 | MAN2B1 "Lysosomal alpha-mannos | 0.473 | 0.454 | 0.434 | 1.8e-159 |
| TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3363 (1188.9 bits), Expect = 0., P = 0.
Identities = 632/947 (66%), Positives = 752/947 (79%)
Query: 13 MQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELI 72
+QVACVQNVLDS++PAL+ADKNRKFIYVEQAFFQRWW +QSEE++ +VK+L++SGQLELI
Sbjct: 66 IQVACVQNVLDSIVPALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIVKELIHSGQLELI 125
Query: 73 NGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG 132
NGGMCMHDEAAPHYIDMIDQTTLGHR+I +FNVTPRIGWQIDPFGHSAVQAYLL AEVG
Sbjct: 126 NGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLLGAEVG 185
Query: 133 FDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVG 192
FD +FF RIDYQDR KR EKTLEV+WR SKSLGSS+QI G P NYEPP FY+E+
Sbjct: 186 FDSVFFGRIDYQDREKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTNYEPPPGGFYYEIT 245
Query: 193 DTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQM 252
D SP+VQDD +LFDYNV ERVN FV+AA+ QANITR NHIM+TMGTDF+YQYAHTW+RQM
Sbjct: 246 DDSPVVQDDPDLFDYNVQERVNAFVAAALDQANITRINHIMFTMGTDFRYQYAHTWYRQM 305
Query: 253 DKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRP 312
DK IHYVN DGRVNA YSTPS+Y DAK+AANE+WPLKT+D+FPYADR NAYWTGYFTSRP
Sbjct: 306 DKLIHYVNLDGRVNAFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGYFTSRP 365
Query: 313 ALKGYVRTMSAYYLAARQLEFFKGRNEVGXXXXXXXXXXXXVQHHDAVSGTEKQHVADDY 372
ALK YVR MSAYYLAARQLEFFKGR++ G QHHDAVSGT KQHVA+DY
Sbjct: 366 ALKRYVRVMSAYYLAARQLEFFKGRSQKGPNTDSLADALAIAQHHDAVSGTSKQHVANDY 425
Query: 373 AKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKS 432
AKRL+IGY EAE VVA SLA LT+ +NP FQQC LLNISYCP SEV+LS GKS
Sbjct: 426 AKRLAIGYVEAESVVATSLAHLTKVDPT--LNP--TFQQCLLLNISYCPSSEVNLSDGKS 481
Query: 433 LVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLG 492
L+V+ YNPLGWKR DI+R+PV+ +V+V DS+G +ESQL+P + ++LR + AYLG
Sbjct: 482 LIVLAYNPLGWKRVDIVRLPVVGGDVSVHDSEGHEVESQLVPFTDEYVALRKYHVEAYLG 541
Query: 493 KSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNL 552
+S P YWL FS +VPPLGF TY IS+AK+ +S V + I +G G+L
Sbjct: 542 QSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTDGYSSKSYVSNILKGEQSIINIGHGHL 601
Query: 553 KLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQP-----SGAYIFRPNGTY 607
KL +S + + Y+N +TS+ + ++Q++ YY +GS D +P SGAY+FRPNGT+
Sbjct: 602 KLSFSTDQGTAINYVNGRTSMTEPVKQTFSYYSAYNGSNDKEPLIPQNSGAYVFRPNGTF 661
Query: 608 PIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKE 667
PI PEGQ+ T++ GPL+DEVHQ+INPWI Q+TRVYKGK+H E+EF VG IPIDDGIGKE
Sbjct: 662 PINPEGQVPLTVIHGPLVDEVHQQINPWISQITRVYKGKEHVEVEFIVGNIPIDDGIGKE 721
Query: 668 VVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNS 727
VVTQI+S++ SNKTFYTDSSGRD+I+RIRDYR DW L+VNQPIAGNYYP+N GIY++D+
Sbjct: 722 VVTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLDVNQPIAGNYYPINHGIYLQDSK 781
Query: 728 SELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKY 787
E S++VDR+ GGSSI DGQ+ELMLHRRL+ DD+RGV+E LNETVCV DKC GLTI GKY
Sbjct: 782 KEFSVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQGKY 841
Query: 788 YLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVAL 847
Y RIDP GE AKWRR+FGQEIYSP LLAF +QD + A++S +D +Y LPDNVAL
Sbjct: 842 YYRIDPYGEGAKWRRTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNVAL 901
Query: 848 ITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELXXXXXXXXXXXVTEMNLSANQERAV 907
+TLQELD G +LLRLAHLYE+EED +LS ++SVEL +TEM+LSANQER+
Sbjct: 902 LTLQELDDGNVLLRLAHLYEVEEDKELSGVASVELKKLFPGKKIGKLTEMSLSANQERST 961
Query: 908 MEKKRLVWRVEGSSK--EQPTAVRGSPVDPAKLVVELAPMEIRTFVI 952
MEKKRLVW+VEG E+ A RG +DP KL +EL PMEIRT +I
Sbjct: 962 MEKKRLVWKVEGEGSYGEEKKAKRGREIDPRKLEMELYPMEIRTVLI 1008
|
|
| TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0292206 manA "alpha-mannosidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O00754 | MA2B1_HUMAN | 3, ., 2, ., 1, ., 2, 4 | 0.3939 | 0.9311 | 0.8822 | yes | no |
| Q8VHC8 | MA2B1_CAVPO | 3, ., 2, ., 1, ., 2, 4 | 0.3964 | 0.9206 | 0.8758 | yes | no |
| P34098 | MANA_DICDI | 3, ., 2, ., 1, ., 2, 4 | 0.3856 | 0.9352 | 0.8871 | yes | no |
| Q29451 | MA2B1_BOVIN | 3, ., 2, ., 1, ., 2, 4 | 0.3880 | 0.9196 | 0.8818 | yes | no |
| O09159 | MA2B1_MOUSE | 3, ., 2, ., 1, ., 2, 4 | 0.3880 | 0.9331 | 0.8825 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | gw1.XII.1318.1 | SubName- Full=Putative uncharacterized protein; (1003 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 958 | |||
| cd10810 | 278 | cd10810, GH38N_AMII_LAM_like, N-terminal catalytic | 1e-145 | |
| PLN02701 | 1050 | PLN02701, PLN02701, alpha-mannosidase | 2e-93 | |
| cd00451 | 258 | cd00451, GH38N_AMII_euk, N-terminal catalytic doma | 6e-86 | |
| pfam01074 | 269 | pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam | 1e-79 | |
| cd10809 | 340 | cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal | 7e-58 | |
| cd10811 | 326 | cd10811, GH38N_AMII_Epman_like, N-terminal catalyt | 3e-49 | |
| cd11666 | 344 | cd11666, GH38N_Man2A1, N-terminal catalytic domain | 9e-49 | |
| cd11667 | 344 | cd11667, GH38N_Man2A2, N-terminal catalytic domain | 2e-45 | |
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 2e-42 | |
| cd10786 | 251 | cd10786, GH38N_AMII_like, N-terminal catalytic dom | 4e-36 | |
| pfam09261 | 82 | pfam09261, Alpha-mann_mid, Alpha mannosidase, midd | 7e-23 | |
| smart00872 | 79 | smart00872, Alpha-mann_mid, Alpha mannosidase, mid | 2e-22 | |
| cd10789 | 252 | cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal | 3e-06 | |
| cd10812 | 258 | cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly | 1e-04 | |
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 0.002 | |
| cd10793 | 279 | cd10793, GH57N_TLGT_like, N-terminal catalytic dom | 0.002 |
| >gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
Score = 433 bits (1115), Expect = e-145
Identities = 142/250 (56%), Positives = 175/250 (70%), Gaps = 4/250 (1%)
Query: 14 QVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELIN 73
Q A VQ +LDS+I L+ + +RKFIYVE AFF RWWR+QSE+ + VK+LV +GQLE IN
Sbjct: 31 QHAGVQYILDSVIEELLKNPDRKFIYVEIAFFSRWWREQSEDTRQKVKKLVKNGQLEFIN 90
Query: 74 GGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNV--TPRIGWQIDPFGHSAVQAYLLSAEV 131
GG CM+DEA HY D+IDQ TLGH+++K+ F PR+GWQIDPFGHS QA L +
Sbjct: 91 GGWCMNDEATTHYEDIIDQMTLGHQFLKDTFGECARPRVGWQIDPFGHSRTQASLFAQM- 149
Query: 132 GFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEV 191
GFD LFF RIDYQD+A+R+ K +E +WR S SLG A I TG+ +Y PP F F++
Sbjct: 150 GFDGLFFGRIDYQDKAQRLKNKEMEFIWRGSPSLGPDADIFTGVLYNHYGPP-PGFCFDI 208
Query: 192 GDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQ 251
+QDD NL DYNV ERV+DFV A QA RTNHIM TMG+DF+YQ A WF+
Sbjct: 209 LCGDEPIQDDPNLEDYNVDERVDDFVQYAKEQAQHYRTNHIMLTMGSDFQYQNAEMWFKN 268
Query: 252 MDKFIHYVNQ 261
MDK I YVN+
Sbjct: 269 MDKLIKYVNK 278
|
The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278 |
| >gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase | Back alignment and domain information |
|---|
| >gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|212105 cd10793, GH57N_TLGT_like, N-terminal catalytic domain of 4-alpha-glucanotransferase; glycoside hydrolase family 57 (GH57) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 958 | |||
| KOG1959 | 996 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PLN02701 | 1050 | alpha-mannosidase | 100.0 | |
| KOG1958 | 1129 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PRK09819 | 875 | alpha-mannosidase; Provisional | 100.0 | |
| KOG4342 | 1078 | consensus Alpha-mannosidase [Carbohydrate transpor | 100.0 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 100.0 | |
| PF01074 | 275 | Glyco_hydro_38: Glycosyl hydrolases family 38 N-te | 100.0 | |
| PF07748 | 457 | Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t | 100.0 | |
| PF09261 | 80 | Alpha-mann_mid: Alpha mannosidase, middle domain; | 99.85 | |
| smart00872 | 79 | Alpha-mann_mid Alpha mannosidase, middle domain. M | 99.81 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 99.44 | |
| PF03065 | 360 | Glyco_hydro_57: Glycosyl hydrolase family 57; Inte | 98.27 | |
| COG1543 | 504 | Uncharacterized conserved protein [Function unknow | 96.34 | |
| PF01522 | 123 | Polysacc_deac_1: Polysaccharide deacetylase; Inter | 95.55 | |
| TIGR03212 | 297 | uraD_N-term-dom putative urate catabolism protein. | 94.34 | |
| COG1449 | 615 | Alpha-amylase/alpha-mannosidase [Carbohydrate tran | 92.68 | |
| TIGR03006 | 265 | pepcterm_polyde polysaccharide deactylase family p | 91.44 | |
| TIGR02764 | 191 | spore_ybaN_pdaB polysaccharide deacetylase family | 91.13 | |
| TIGR02884 | 224 | spore_pdaA delta-lactam-biosynthetic de-N-acetylas | 90.55 | |
| TIGR02873 | 268 | spore_ylxY probable sporulation protein, polysacch | 88.0 |
| >KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-217 Score=1803.80 Aligned_cols=921 Identities=50% Similarity=0.827 Sum_probs=835.8
Q ss_pred EEeeccccccchhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCC
Q 002162 5 LMINGMVYMQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP 84 (958)
Q Consensus 5 ~~~g~~~~~~~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~ 84 (958)
.|||++|.||+++|++|||+||++|.+||+|||+++|++||.+||++|+++.|+.||+||++|||||+||||||+|||++
T Consensus 58 yy~G~~n~Iq~AgVqyIldSVV~eLl~dp~RRFI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~ 137 (996)
T KOG1959|consen 58 YYYGSKNKIQHAGVQYILDSVVEELLKDPNRRFIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATT 137 (996)
T ss_pred heecCCcccchhhHHHHHHHHHHHHhcCCccceehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHcC--CCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeC
Q 002162 85 HYIDMIDQTTLGHRYIKEQFN--VTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRAS 162 (958)
Q Consensus 85 ~~es~Irql~~G~~~l~~~fG--~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~ 162 (958)
||.|+|+||+.||+||.++|| .+|++||||||||||+.+|+|| ++|||++++|+||||++|+.|..++.|||+|+|+
T Consensus 138 hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S 216 (996)
T KOG1959|consen 138 HYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGS 216 (996)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhccceEEeecC
Confidence 999999999999999999999 7999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCC
Q 002162 163 KSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY 242 (958)
Q Consensus 163 d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y 242 (958)
+++++.++|||++|+.|||+| +|||||.+|.+.|++|++.+.++||++|++.|++..+.++.+|+|||||+|||+||+|
T Consensus 217 ~sL~~~~~iFTg~l~n~Y~~P-~gfc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY 295 (996)
T KOG1959|consen 217 ESLGSSSQIFTGALYNHYSPP-PGFCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQY 295 (996)
T ss_pred ccccchhhhhhhccccCCCCC-CCceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCcee
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhc---CC-CeEEEEcChhhHHHHHHhcCCCCCcccCCCccCCcCCCCceeeeeccchhhhHHH
Q 002162 243 QYAHTWFRQMDKFIHYVNQ---DG-RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYV 318 (958)
Q Consensus 243 ~~a~~~~~~~~~li~~iN~---~~-~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~ 318 (958)
.+|..||+||||||+|+|+ .+ .+++.||||+||++++|+.+..||+++.|||||++++|.||||||||||.+|++.
T Consensus 296 ~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~ 375 (996)
T KOG1959|consen 296 ENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFE 375 (996)
T ss_pred hhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHH
Confidence 9999999999999999994 34 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccc--CCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002162 319 RTMSAYYLAARQLEFFKGRNE--VGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTE 396 (958)
Q Consensus 319 R~~e~~L~~aE~l~~la~~~~--~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~ 396 (958)
|++++.|++|++|.++|++.. ..+.++.|+++|++.|||||||||+|++|.+||+++|..|+..|+++++.+|+.|..
T Consensus 376 R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~ 455 (996)
T KOG1959|consen 376 RDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTN 455 (996)
T ss_pred hhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999998754 568899999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEeCCcEEEEcCCCCEEEEEEeecc
Q 002162 397 FSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLL 476 (958)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~ 476 (958)
.. ...|++|.+||+|+||.++. .++++.|+|||||+|.++++|+|||+.+++.|+|+.|++|++|++|..
T Consensus 456 ~~-------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~ 525 (996)
T KOG1959|consen 456 LP-------NGEFQSCLLLNISECAFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVP 525 (996)
T ss_pred CC-------CccchhhhhhccccCCCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccc
Confidence 43 34799999999999999863 357789999999999999999999999999999999999999999987
Q ss_pred cccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCccccceeeeccccCCCceEEccCeEEEEE
Q 002162 477 KDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLY 556 (958)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~ 556 (958)
.....+. .......++|+|.+.|||+|+++|.|+....+...+ .+.+..........+.|+|+++++.|
T Consensus 526 ~~~~al~----------~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~f 594 (996)
T KOG1959|consen 526 WQVLALE----------SRNNDTKHELVFKASVPPLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVF 594 (996)
T ss_pred hhhhhhh----------ccccCCCceEEEEEEecCccceEEEEeecCcccccc-cccccccccccCcceEeccceEEEEE
Confidence 5433321 112345689999999999999999999655432210 01111111223334899999999999
Q ss_pred ECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCCccCCC-CCceEEEEeCCceEEEEEEEcCe
Q 002162 557 SGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPE-GQLSFTILRGPLLDEVHQRINPW 635 (958)
Q Consensus 557 ~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~~~~~~-~~~~i~v~~Gpl~~~v~~~~~s~ 635 (958)
|.++|.++++....+|++..+.|+|.+|.++.|+++.+.||||+|+| +..++++. ....++|..|||+.||++.++.|
T Consensus 595 d~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~w 673 (996)
T KOG1959|consen 595 DNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPW 673 (996)
T ss_pred cCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHH
Confidence 98889999999888999999999999999998875678999999999 54444443 35788999999999999999999
Q ss_pred EEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCcccccCCcccccee
Q 002162 636 IYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYY 715 (958)
Q Consensus 636 i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyY 715 (958)
++|++|+|+|.+++||||.|+|||++++.|||++.||+|+|+|++.|||||||+||+||.+++|++|....++||+||||
T Consensus 674 iSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYY 753 (996)
T KOG1959|consen 674 ISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYY 753 (996)
T ss_pred HhheeEecCCCcceEEEEEecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeeccCCCCcCccccccccccccccccCeEEEeEEEEeecCcc
Q 002162 716 PVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVG 795 (958)
Q Consensus 716 P~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~ 795 (958)
||++.|||+|++.+|+|||||+|||||++||+||||||||+++||+|||||+|||+.++ ..||+++|+|++.++...
T Consensus 754 Pvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~ 830 (996)
T KOG1959|consen 754 PVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAG 830 (996)
T ss_pred ccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999886 279999999999999887
Q ss_pred chh-hhccccchhhccCceeeeeccCCCccccccc-c--ccccCcccccCCCcceEEEeeecCCCcEEEEEeeccccccC
Q 002162 796 EAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHL-A--TYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEED 871 (958)
Q Consensus 796 ~~~-~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~lp~~i~l~tl~~~~~~~~llRl~~~~~~~~~ 871 (958)
+.+ .++|..+.++..|.+.+|++..+..+..... + .|++ +..||.+|||+||++|+++.+||||+|+|+++||
T Consensus 831 d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~---~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED 907 (996)
T KOG1959|consen 831 DGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSG---SYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGED 907 (996)
T ss_pred ccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCcccccc---ccCCCcceeeeecccCCCCceEeeehhhhhcccc
Confidence 665 5778889999999999999876543433221 2 2444 3589999999999999999999999999999999
Q ss_pred CCCceeeeeeccccCCCCccceEEeccccccchhhhhhccceeeeec-CCC---CCCCcccCCCCCCC-CCceEEecCcc
Q 002162 872 TDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVE-GSS---KEQPTAVRGSPVDP-AKLVVELAPME 946 (958)
Q Consensus 872 ~~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~-~~~---~~~~~~~~~~~~~~-~~~~i~l~P~e 946 (958)
+++|++++|||.++|..+++..++||+|+||+++++| +|++|... .+. .....+.+..|+++ +.+.|+|.|||
T Consensus 908 ~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~m--kr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~Pme 985 (996)
T KOG1959|consen 908 SELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDM--KRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPME 985 (996)
T ss_pred cccCcceEEEhHHhhcccCeeEEEEeeccCccChhhh--hhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccE
Confidence 9999999999999999999999999999999999999 55555444 221 12223445666765 66899999999
Q ss_pred eeEEEEEEeec
Q 002162 947 IRTFVIEFYSE 957 (958)
Q Consensus 947 IrTf~i~~~~~ 957 (958)
||||+|+.+++
T Consensus 986 IRTfii~~~~~ 996 (996)
T KOG1959|consen 986 IRTFIIKFQQK 996 (996)
T ss_pred EEEEEEEEecC
Confidence 99999998764
|
|
| >PLN02701 alpha-mannosidase | Back alignment and domain information |
|---|
| >KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09819 alpha-mannosidase; Provisional | Back alignment and domain information |
|---|
| >KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold | Back alignment and domain information |
|---|
| >smart00872 Alpha-mann_mid Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1543 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase | Back alignment and domain information |
|---|
| >TIGR03212 uraD_N-term-dom putative urate catabolism protein | Back alignment and domain information |
|---|
| >COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB | Back alignment and domain information |
|---|
| >TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase | Back alignment and domain information |
|---|
| >TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 958 | ||||
| 1ps3_A | 1045 | Golgi Alpha-mannosidase Ii In Complex With Kifunens | 3e-71 | ||
| 3dx3_A | 1045 | Golgi Alpha-Mannosidase Ii In Complex With Mannosta | 4e-71 | ||
| 1hxk_A | 1015 | Golgi Alpha-Mannosidase Ii In Complex With Deoxyman | 4e-71 | ||
| 1qwn_A | 1045 | Golgi Alpha-Mannosidase Ii Covalent Intermediate Co | 5e-71 | ||
| 1qwu_A | 1045 | Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit | 2e-70 | ||
| 3cv5_A | 1045 | Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu | 3e-70 | ||
| 1hty_A | 1015 | Golgi Alpha-Mannosidase Ii Length = 1015 | 2e-67 | ||
| 1o7d_A | 298 | The Structure Of The Bovine Lysosomal A-Mannosidase | 4e-60 | ||
| 1o7d_D | 282 | The Structure Of The Bovine Lysosomal A-Mannosidase | 4e-51 | ||
| 1o7d_C | 159 | The Structure Of The Bovine Lysosomal A-Mannosidase | 2e-19 | ||
| 1o7d_B | 84 | The Structure Of The Bovine Lysosomal A-Mannosidase | 5e-14 | ||
| 1o7d_E | 126 | The Structure Of The Bovine Lysosomal A-Mannosidase | 1e-06 |
| >pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 | Back alignment and structure |
|
| >pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 | Back alignment and structure |
| >pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 | Back alignment and structure |
| >pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 | Back alignment and structure |
| >pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 | Back alignment and structure |
| >pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 | Back alignment and structure |
| >pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 | Back alignment and structure |
| >pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 | Back alignment and structure |
| >pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 | Back alignment and structure |
| >pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 | Back alignment and structure |
| >pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 | Back alignment and structure |
| >pdb|1O7D|E Chain E, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 126 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 | Back alignment and structure |
|---|
Score = 710 bits (1832), Expect = 0.0
Identities = 233/1006 (23%), Positives = 405/1006 (40%), Gaps = 130/1006 (12%)
Query: 16 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGG 75
+++L + + L + KFI+ E ++F R++ D E + +K +V +GQLE + GG
Sbjct: 105 HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGG 164
Query: 76 MCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDF 135
M DEA H+ +++ Q T G ++K+ NVTP W I PFGHS Y+L + GF
Sbjct: 165 WVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKN 223
Query: 136 LFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKN-YEPPS---------D 185
+ R Y + + ++ LE +WR + T + P Y+ P
Sbjct: 224 MLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCC 283
Query: 186 NFYFE----VGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFK 241
F F+ G + P + D NV R + V +A + RTN ++ +G DF+
Sbjct: 284 QFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFR 343
Query: 242 YQYAHTWFRQ---MDKFIHYVNQDGR--VNALYSTPSMYIDA----KYAANESWPLKTDD 292
++ W Q ++ ++N V A + T Y DA + A +P + D
Sbjct: 344 FKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGD 403
Query: 293 FFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNEVGLSTDSLADA-- 350
FF YADR + YW+GY+TSRP K R + Y AA L + + + + L A
Sbjct: 404 FFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARR 463
Query: 351 -LALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNF 409
L+L QHHD ++GT K HV DY +R+ + V+ S+ L +K +P +F
Sbjct: 464 ELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLL--TKPSIYSPDFSF 521
Query: 410 QQCPLLNISYCPPSEVDLS---------SGKSLVVVVYNPLGWKREDIIRIPVINENVTV 460
L+ S P S V+ S S VV++N L RE ++ V + V+V
Sbjct: 522 SYF-TLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSV 580
Query: 461 KDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIIS 520
D +E+Q+ P+ T Y + F A VPP+G TY+++
Sbjct: 581 TDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVPPMGLATYVLT 635
Query: 521 SAKQAASHSGMRTVYKSQIRQN----------------DTIEVGPGNLKLLYSGKRAKLM 564
+ H+ + + I + GN L ++ L
Sbjct: 636 ISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLK 695
Query: 565 RYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPL 624
++ S + + ++ Y SGAY+F PNG GQ + +G L
Sbjct: 696 SIQLTQDSPHVPVHFKFLKYGVRSHG---DRSGAYLFLPNGPASPVELGQPVVLVTKGKL 752
Query: 625 LDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYT 684
V + ++Q G +G + E+V ++ +++ S FYT
Sbjct: 753 ESSVSVGLPSVVHQTIM-RGGAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYT 806
Query: 685 DSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIA 744
D +G FI+R R + P+ NYYP+ G++++D ++ L++L + +GGSS+A
Sbjct: 807 DLNGLQFIKRRRLDK--------LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLA 858
Query: 745 DGQLELMLHRRLVADDNRGVSEALNETV-------CVFDKCEGLTIIGKYYLRIDPVGEA 797
G+LE+M RRL +DD RG+ + + + V +K K + P G
Sbjct: 859 SGELEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSK----LHPAGYL 914
Query: 798 AKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK 857
Q + P + + W + + + +++ + ++ L
Sbjct: 915 TSAAHKASQSLLDPLDKFIFAE--NEWIGAQ-GQFGGDHPS--AREDLDVSVMRRLTKSS 969
Query: 858 -------ILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEK 910
+L +L + + + +++ + P +++ L+ Q ++
Sbjct: 970 AKTQRVGYVLHRTNLMQCGTPEEHTQK--LDVCHLLP--NVARCERTTLTFLQNLEHLDG 1025
Query: 911 KRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYS 956
+ E+ PME +V S
Sbjct: 1026 --------------------------MVAPEVCPMETAAYVSSHSS 1045
|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 | Back alignment and structure |
|---|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 | Back alignment and structure |
|---|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 958 | |||
| 3bvx_A | 1045 | Alpha-mannosidase 2; family 38 glycoysl hydrolase, | 100.0 | |
| 2wyh_A | 923 | Alpha-mannosidase; hydrolase, glycosidase, glycosi | 100.0 | |
| 3lvt_A | 899 | Glycosyl hydrolase, family 38; PSI, MCSG, structur | 100.0 | |
| 1o7d_A | 298 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_D | 282 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_C | 159 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.97 | |
| 1o7d_E | 126 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.92 | |
| 1o7d_B | 84 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.88 | |
| 1k1x_A | 659 | 4-alpha-glucanotransferase; 2.40A {Thermococcus li | 99.69 | |
| 3p0b_A | 540 | TT1467 protein; glycoside hydrolase GH57, glycogen | 98.8 | |
| 3n98_A | 562 | Alpha-amylase, GH57 family; GH57 family member, br | 98.76 | |
| 2b5d_X | 528 | Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. | 98.6 | |
| 3rxz_A | 300 | Polysaccharide deacetylase; structural genomics, P | 95.44 | |
| 3cl6_A | 308 | PUUE allantoinase; URIC acid, nitrogen fixation, h | 95.07 | |
| 3s6o_A | 321 | Polysaccharide deacetylase family protein; ssgcid, | 94.83 | |
| 3qbu_A | 326 | Putative uncharacterized protein; metallo enzyme, | 91.78 | |
| 2cc0_A | 195 | Acetyl-xylan esterase; hydrolase, carbohydrate est | 89.71 | |
| 2y8u_A | 230 | Chitin deacetylase; hydrolase; 1.99A {Emericella n | 89.63 | |
| 1ny1_A | 240 | Probable polysaccharide deacetylase PDAA; structur | 85.74 | |
| 2j13_A | 247 | Polysaccharide deacetylase; family 4, peptidoglyca | 80.74 |
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-158 Score=1485.08 Aligned_cols=872 Identities=25% Similarity=0.423 Sum_probs=733.1
Q ss_pred hhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHH
Q 002162 16 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTL 95 (958)
Q Consensus 16 ~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~ 95 (958)
+++++||++||++|++||++||+|+|++||++||++++|+++++||+||++|||||+||||||+|||++||||+||||++
T Consensus 105 ~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~ 184 (1045)
T 3bvx_A 105 HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTE 184 (1045)
T ss_dssp HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEEe
Q 002162 96 GHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGI 175 (958)
Q Consensus 96 G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~ 175 (958)
||+|++++||+.|++||+|||||||++||||| ++|||++++|+|++|++++.|+..+.+||+|+|+|+..+||+||||+
T Consensus 185 G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~ 263 (1045)
T 3bvx_A 185 GQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHM 263 (1045)
T ss_dssp HHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEE
T ss_pred HHHHHHHHhCCCCceEEcCCCCCccHHHHHHH-HHcCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEe
Confidence 99999999999999999999999999999999 99999999999999999999998999999999766555699999999
Q ss_pred CCC-CCC-----CCCC----CCccccCCC---CCCccCCc-ccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCC
Q 002162 176 SPK-NYE-----PPSD----NFYFEVGDT---SPIVQDDM-NLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFK 241 (958)
Q Consensus 176 ~~~-~Y~-----~p~~----~f~f~~~~~---~~~~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~ 241 (958)
+|. +|+ +|++ +|+|+.+.. .|||.++| .+.++|++++++.+++++++++..|+++++|+|+|+||+
T Consensus 264 ~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~ 343 (1045)
T 3bvx_A 264 MPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFR 343 (1045)
T ss_dssp CCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETC
T ss_pred ccccccCcccccCCCccccccccccccccccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCC
Confidence 994 675 3323 355655432 46665554 567889999999999999999989999999999999999
Q ss_pred CcchhHH---HHHHHHHHHHHhcCC--CeEEEEcChhhHHHHHHhcC----CCCCcccCCCccCCcCCCCceeeeeccch
Q 002162 242 YQYAHTW---FRQMDKFIHYVNQDG--RVNALYSTPSMYIDAKYAAN----ESWPLKTDDFFPYADRENAYWTGYFTSRP 312 (958)
Q Consensus 242 y~~a~~~---~~~~~~li~~iN~~~--~~~i~~sT~~~Yf~a~~~~~----~~~p~~~gDf~py~~~~~~yWtG~yTSr~ 312 (958)
|+++..| ++||+++|+++|+.+ .++++|||+++||+++++.. ..||++.|||+||++++++||+|||||||
T Consensus 344 ~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~ 423 (1045)
T 3bvx_A 344 FKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRP 423 (1045)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSH
T ss_pred CcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECCHHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccH
Confidence 9998765 899999999999753 68999999999999998753 36999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcc---ccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 002162 313 ALKGYVRTMSAYYLAARQLEFFKGR---NEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAA 389 (958)
Q Consensus 313 ~~K~~~R~~e~~L~~aE~l~~la~~---~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~ 389 (958)
.+|+++|++|++|++||+|+++|.. .++...++++|++|+++||||+||||++++|++||.+||.+|.+.++.+++.
T Consensus 424 ~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~ 503 (1045)
T 3bvx_A 424 YHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQ 503 (1045)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999854 3455678899999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCC---ccccccCCcccccCCCCccccCCCC---ceEEEEEcCCCceEeEEEEEEEeCCcEEEEcC
Q 002162 390 SLACLTEFSKNGCVNPI---TNFQQCPLLNISYCPPSEVDLSSGK---SLVVVVYNPLGWKREDIIRIPVINENVTVKDS 463 (958)
Q Consensus 390 ~l~~L~~~~~~~~~~~~---~~~~~~~~ln~s~c~~~~~~~~~~~---~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~ 463 (958)
+++.|+......+..+. .+++.|.+++.+.|+....-...++ ...|+|||||+|+|+++|+|+|+.+.+.|+|.
T Consensus 504 al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~ 583 (1045)
T 3bvx_A 504 SVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDL 583 (1045)
T ss_dssp HHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCCCCCEECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEET
T ss_pred HHHHHhhccccccccccccccchhhhcccccccccccccccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcC
Confidence 99999853222111111 2233455566777775421000122 56899999999999999999999999999999
Q ss_pred CCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCcccccee---------
Q 002162 464 KGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTV--------- 534 (958)
Q Consensus 464 ~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~~s~~--------- 534 (958)
+|++|++|+++.+.....+....+ ........|+|+|.++||||||++|.|............+.+
T Consensus 584 ~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1045)
T 3bvx_A 584 ANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTS 658 (1045)
T ss_dssp TCCEECEEEEEEEEEEEETTTTEE-----EEEEEEEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCC
T ss_pred CCCEEeEEEeeccccccccccccc-----cccCCCCcEEEEEEeccCCceeEEEEEEecCCccccccccceeeccccccc
Confidence 999999999987643221100000 000012357899999999999999999876543210000011
Q ss_pred -eec-cccCCCceEEccCeE------EEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCC
Q 002162 535 -YKS-QIRQNDTIEVGPGNL------KLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGT 606 (958)
Q Consensus 535 -~~~-~~~~~~~~~ieN~~~------~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~ 606 (958)
... .....+...|||++| +|+||+ +|.|++|+||++|+++.+.++|.+|.+..+ ++.||||+|+|++.
T Consensus 659 ~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~f~~Y~~~~~---~~~sgaY~F~P~~~ 734 (1045)
T 3bvx_A 659 LPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFKFLKYGVRSH---GDRSGAYLFLPNGP 734 (1045)
T ss_dssp CCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEEEEEECBCSS---SCCCCSSCCCBSSS
T ss_pred ccccccccCCCceeecccccccccccEEEECC-CCcEEEEEEcCCCeEEEEeeEEEEEecccC---CCCCcceEecCCCC
Confidence 000 001234578999999 999995 999999999999999999999999976554 67899999999987
Q ss_pred C-ccCCCCCceEEEEeCCceEEEEEEEcCeEEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEc
Q 002162 607 Y-PIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTD 685 (958)
Q Consensus 607 ~-~~~~~~~~~i~v~~Gpl~~~v~~~~~s~i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytD 685 (958)
. ++.. ....++|++|||+++|++.+ ++++|++|| ++++|||+++|+ |.+..|||++++|+|+|+|+..||||
T Consensus 735 ~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL--~~~~ieie~~Vd---~~~~~~~el~~rf~t~i~s~~~fyTD 807 (1045)
T 3bvx_A 735 ASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIM--RGGAPEIRNLVD---IGSLDNTEIVMRLETHIDSGDIFYTD 807 (1045)
T ss_dssp CEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEE--SSSSCEEEEEEC---CTTCTTEEEEEEEEECCCCTTEEEEE
T ss_pred Cccccc-CCceEEEEeCCeEEEEEEEE-eeEEEEEEE--CCeeEEEEEEEe---cCCCCCeEEEEEeecccCCCCeEEEe
Confidence 5 3332 35678889999999999999 589999999 888999999994 55456999999999999998899999
Q ss_pred CCcccceecccccccCcccccCCccccceeeccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeeccCCCCcCcc
Q 002162 686 SSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVS 765 (958)
Q Consensus 686 snG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGv~ 765 (958)
+|||++++|+++. .+|+++|||||+++|+|+|++.|||||+||+||+||+++|+||||||||+++||+||||
T Consensus 808 ~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvg 879 (1045)
T 3bvx_A 808 LNGLQFIKRRRLD--------KLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLG 879 (1045)
T ss_dssp ETTTEEEEEECCT--------TSCGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCC
T ss_pred cCCceeEEcCCCC--------CCCcccceEEeeeeEEEEcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCccccc
Confidence 9999999999874 36889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCeEEEeEEEEeecCccchhh------------hccccchhhccCceeeeeccCCCccccccccccc
Q 002162 766 EALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK------------WRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYS 833 (958)
Q Consensus 766 e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~ 833 (958)
|||+|+ ++++|+|||++++...... ..|..++++++||+++++..+. + .....+|+
T Consensus 880 e~l~d~---------~~~~~~~~l~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~-~~~~~~~~ 947 (1045)
T 3bvx_A 880 QGVLDN---------KPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAENE--W-IGAQGQFG 947 (1045)
T ss_dssp SCBCCC---------CCEEEEEEEEEEECTTSCCCCTTCSEECCCHHHHHHHHHHHSCCEEEEECSSC--C-TTBCSEEC
T ss_pred ccccCC---------ceeeeEEEEEEecccccccccccccccccCHHHHHHHHHHhCCcceeeccCcc--c-ccccccCC
Confidence 999986 4589999999987654331 2456788999999999876332 2 22346688
Q ss_pred cCcccccCCCcceEEEeeecCCCc-----EEEEEeec--cccccCCCCceeeeeeccccCCCCccceEEeccccccchhh
Q 002162 834 AMDTTYVLPDNVALITLQELDSGK-----ILLRLAHL--YEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERA 906 (958)
Q Consensus 834 ~l~~~~~lp~~i~l~tl~~~~~~~-----~llRl~~~--~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~ 906 (958)
++. .+|||||||+|||++++++ +|||| |. |+++++.. +++++|||.+||.. +++++||||+|++.++
T Consensus 948 ~l~--~~lP~~vhlltL~~~~~~~~~~~~~ll~L-~~~~~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~ 1021 (1045)
T 3bvx_A 948 GDH--PSAREDLDVSVMRRLTKSSAKTQRVGYVL-HRTNLMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLE 1021 (1045)
T ss_dssp TTS--CCCCTTEEEEEEEECSCTTCSEEEEEEEE-EECCCCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEE
T ss_pred ccc--ccCCCCEEEEEeEecCCCCccCceEEEEE-eeeccccCcCcc-cCcccccHHHHhcC--cceEEEecccCCcccc
Confidence 775 3899999999999999887 99999 55 88888765 78999999999998 9999999999998775
Q ss_pred hhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEEEEee
Q 002162 907 VMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYS 956 (958)
Q Consensus 907 ~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~i~~~~ 956 (958)
++. +...|+|+|||||||+|++++
T Consensus 1022 ~~~--------------------------~~~~v~l~PmeirTf~i~~~~ 1045 (1045)
T 3bvx_A 1022 HLD--------------------------GMVAPEVCPMETAAYVSSHSS 1045 (1045)
T ss_dssp ECG--------------------------GGCCCCCCTTCEEEEEEEEEC
T ss_pred ccC--------------------------CCcceEEcCceeEEEEEEeeC
Confidence 541 123689999999999999864
|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* | Back alignment and structure |
|---|
| >3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A | Back alignment and structure |
|---|
| >3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* | Back alignment and structure |
|---|
| >2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 | Back alignment and structure |
|---|
| >3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A | Back alignment and structure |
|---|
| >3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 | Back alignment and structure |
|---|
| >3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3 | Back alignment and structure |
|---|
| >2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans} | Back alignment and structure |
|---|
| >1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1 | Back alignment and structure |
|---|
| >2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 958 | ||||
| g1o7d.2 | 490 | b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma | 1e-141 | |
| d3bvua2 | 522 | b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { | 1e-124 | |
| g1o7d.3 | 330 | c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno | 1e-89 | |
| d3bvua3 | 381 | c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru | 2e-88 | |
| d1k1xa3 | 310 | c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te | 2e-35 | |
| d3bvua1 | 111 | a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr | 2e-26 | |
| g1o7d.1 | 95 | a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann | 6e-25 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 | Back information, alignment and structure |
|---|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 958 | |||
| g1o7d.2 | 490 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d3bvua2 | 522 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| g1o7d.3 | 330 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d3bvua1 | 111 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 99.94 | |
| g1o7d.1 | 95 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 99.94 | |
| d1k1xa3 | 310 | 4-alpha-glucanotransferase, N-terminal domain {Arc | 99.93 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 98.04 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 97.59 | |
| d1z7aa1 | 301 | Hypothetical protein PA1517 {Pseudomonas aeruginos | 94.93 | |
| d2c1ia1 | 196 | Peptidoglycan GlcNAc deacetylase C-terminal domain | 91.17 | |
| d2cc0a1 | 192 | Acetyl-xylan esterase {Streptomyces lividans [TaxI | 89.55 | |
| d1ny1a_ | 235 | Probable polysaccharide deacetylase PdaA {Bacillus | 86.66 | |
| d2j13a1 | 235 | Putative polysaccharide deacetylase BA0424 {Bacill | 86.66 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|