Citrus Sinensis ID: 002190

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-----

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFSLECLVSVCCCCGQFGCFLFQ

cccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcHHHHcHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccc

cHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccccccEEcccccHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHEccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccEccEEEEEccccHHHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEcccccEEEEcc

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLtkfgwfdddrFRDLVKESTNFLSQATSDHYAIGLKILNQLVSemnqpnpglpsthhrrvacsfrdqSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKClsfdfvgtsidesseefgtvqipsawrpvledpstlqIFFDYyaiteaplSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQtgqgladhdnYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVtsvpylkgdapslldefvpkiTEGFITsrfnsvqagfpddlsdnpldNVELLQDQLdcfpylcrfqyensglyiINTMEPILQSYTERarmqtgdkseISVIEAKLAWIVHIIAAIVKIKqctgcslesQEVLDAELSARVLQLINVtdsglhsqrYCELSKQRLDRAILTFFQHFRksyvgdqamhSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANhtrehfpfleeyrcsrsrttfyYTIGWLIfmeespvkfkssmdPLLQVFISLestpdsmfrTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFdwlypahmplllkgishwtdtpevttPLLKFMAEFVLNKAqrltfdssspngiLLFREVSKLIVAYGSrvlslpnaadiyaYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLesglkgldtnisSQVYAQKWHQVICLCPFRFSLECLVSvccccgqfgcflfq

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFgtvqipsawrpvleDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINvtdsglhsqRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHtrehfpfleeyrcsrsrTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISlestpdsmfRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQrltfdssspnGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFSLECLVSVCCCCGQFGCFLFQ

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWivhiiaaivkikQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARlsellglhdhllllNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFsleclvsvccccgqfgcflfq

*********LCERLYN******RAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVS**************RRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARM**GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFSLECLVSVCCCCGQFGCFLF*

MESLAQLEALCERLYNS*********ENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQ****************SVIEAKLAWIVHIIAAIVKIK*************DAELSARVLQLINVTD****************DRAILTFFQHFRKSYVGDQAMHSS***AR*SELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVL*********AYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFSLECLVSVCCCCGQFGCFLFQ

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MESxxxxxxxxxxxxxxxxxxxxxHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFSLECLVSVCCCCGQFGCFLFQ

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		955	2.2.26 [Sep-21-2011]
Q5ZLT0		1087	Exportin-7 OS=Gallus gall	yes	no	0.946	0.831	0.451	0.0
Q9EPK7		1087	Exportin-7 OS=Mus musculu	yes	no	0.943	0.828	0.448	0.0
Q9UIA9		1087	Exportin-7 OS=Homo sapien	yes	no	0.946	0.831	0.450	0.0
Q5R9G4		1087	Exportin-7 OS=Pongo abeli	yes	no	0.943	0.828	0.447	0.0
Q704U0		1087	Exportin-7-A OS=Xenopus l	N/A	no	0.942	0.827	0.446	0.0
Q569Z2		1087	Exportin-7-B OS=Xenopus l	N/A	no	0.943	0.828	0.442	0.0
Q9H2T7		1088	Ran-binding protein 17 OS	no	no	0.944	0.829	0.422	0.0
Q99NF8		1088	Ran-binding protein 17 OS	no	no	0.947	0.831	0.425	0.0
Q9GQN0		1098	Ran-binding protein 16 OS	yes	no	0.934	0.812	0.406	0.0
Q54DN3		1007	Exportin-7 OS=Dictyosteli	yes	no	0.869	0.824	0.364	1e-151

>sp\|Q5ZLT0\|XPO7_CHICK Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1	Back alignment and function desciption

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/937 (45%), Positives = 603/937 (64%), Gaps = 33/937 (3%)

Query: 1   MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
           ++SLAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5   VQSLAQLENLCKQLYETTDTATRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 61  SSLLKQV--TEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDD 118
           + L K V  T + L L+ R+DIRNY++NYLA R P+L +FVT +LIQL  R+TK GWFD 
Sbjct: 65  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 123

Query: 119 DR----FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFR 174
            +    FR+++ + T FL Q + +H  IG+ IL+QL +E+NQ +   P T HR++A SFR
Sbjct: 124 QKDEYVFRNVITDVTRFL-QDSVEHCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 182

Query: 175 DQSLFQIFQISLTSLGQ-------LKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEE 227
           D SLF IF +S   L Q       L  +    L    L L   CL+FDF+GTS DESS++
Sbjct: 183 DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDD 242

Query: 228 FGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARS 287
             TVQIP++WR    D STLQ+FFD Y       S   L CLV++ASVRRSLF N+A R+
Sbjct: 243 LCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLF-NNAERA 301

Query: 288 KFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAE 347
           KFL+HL+ G K IL+  Q L+D +NYHE+CRLL R + NYQL ELV VE Y + I+L+A 
Sbjct: 302 KFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIAN 361

Query: 348 FTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSV 407
           FT+ SLQ W++A +SV+YLL LW RL  SVPY+K   P +L+ + P++T+ +ITSR  SV
Sbjct: 362 FTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESV 421

Query: 408 QAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQT 467
                D L D PLD+  L+Q QLD    + R +YE +   ++   +   QSY E  +  T
Sbjct: 422 HIILRDGLED-PLDDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAT 480

Query: 468 GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLH 527
               +++V E +L W+V+II A++   + +  S + Q+ +D EL  RVLQL+N+TDS   
Sbjct: 481 ASPMDVAVQEGRLTWLVYIIGAVIG-GRVSFASTDEQDAMDGELVCRVLQLMNLTDS--- 536

Query: 528 SQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVG 587
             R  +   ++L+ A+L+FF+ FRK Y+GDQ   SSKLY RLSE+LGL+D  ++L+V +G
Sbjct: 537 --RLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIG 594

Query: 588 KIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEY 647
           KI TNLK +   + +   TL L  +L+ GY + + L+KL  ++F++ NHT EHF FL   
Sbjct: 595 KIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGIN 654

Query: 648 RCS-----RSRTTFYYTIGWLIFME--ESPVKFKSSMDPLLQVFISLEST-PDSMFRTDA 699
             S     R RTTFY  +G L+ ++  E   +++  M PL   F ++      + F    
Sbjct: 655 NQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFETVAQMFSTNTFNEQE 714

Query: 700 VKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKF 759
            K  L+GL+RDLRGIA A N++ ++ +LF+W+YP++MP+L + I  W   P  TTP+LK 
Sbjct: 715 AKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKL 774

Query: 760 MAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAA--DIYAYKYKGMWI 817
           MAE V N++QRL FD SSPNGILLFRE SK+I  YG+R+L+L       +YA K KG+ I
Sbjct: 775 MAELVHNRSQRLQFDVSSPNGILLFRETSKMITTYGNRILTLGEVPKDQVYALKLKGISI 834

Query: 818 CFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFL 877
           CF++L  AL+G+YVNFGVF LYGD AL +AL   +K+ LSIP +D+L + KL+++Y++ L
Sbjct: 835 CFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLL 894

Query: 878 EVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNI 914
           EVL   H+ FI +L  +  M+I+ S+  GL  LDT +
Sbjct: 895 EVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMV 931

Mediates the nuclear export of proteins (cargos) with broad substrate specificity.
Gallus gallus (taxid: 9031)

>sp\|Q9EPK7\|XPO7_MOUSE Exportin-7 OS=Mus musculus GN=Xpo7 PE=2 SV=3	Back alignment and function description

>sp\|Q9UIA9\|XPO7_HUMAN Exportin-7 OS=Homo sapiens GN=XPO7 PE=1 SV=3	Back alignment and function description

>sp\|Q5R9G4\|XPO7_PONAB Exportin-7 OS=Pongo abelii GN=XPO7 PE=2 SV=3	Back alignment and function description

>sp\|Q704U0\|XPO7A_XENLA Exportin-7-A OS=Xenopus laevis GN=xpo7-a PE=1 SV=1	Back alignment and function description

>sp\|Q569Z2\|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1	Back alignment and function description

>sp\|Q9H2T7\|RBP17_HUMAN Ran-binding protein 17 OS=Homo sapiens GN=RANBP17 PE=2 SV=1	Back alignment and function description

>sp\|Q99NF8\|RBP17_MOUSE Ran-binding protein 17 OS=Mus musculus GN=Ranbp17 PE=2 SV=1	Back alignment and function description

>sp\|Q9GQN0\|RBP16_DROME Ran-binding protein 16 OS=Drosophila melanogaster GN=Ranbp16 PE=2 SV=1	Back alignment and function description

>sp\|Q54DN3\|XPO7_DICDI Exportin-7 OS=Dictyostelium discoideum GN=xpo7 PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		955
255569209		1089	Exportin-7, putative [Ricinus communis]	0.960	0.842	0.920	0.0
359494939		1052	PREDICTED: exportin-7-like [Vitis vinife	0.960	0.871	0.929	0.0
449458075		1061	PREDICTED: LOW QUALITY PROTEIN: exportin	0.960	0.864	0.912	0.0
224057198		1049	predicted protein [Populus trichocarpa]	0.957	0.871	0.912	0.0
356507720		1051	PREDICTED: exportin-7-A-like [Glycine ma	0.957	0.869	0.888	0.0
356517848		1053	PREDICTED: exportin-7-A-like [Glycine ma	0.957	0.867	0.887	0.0
224073084		1049	predicted protein [Populus trichocarpa]	0.957	0.871	0.903	0.0
30681279		1066	armadillo/beta-catenin-like repeat-conta	0.960	0.860	0.844	0.0
334187450		1059	armadillo/beta-catenin-like repeat-conta	0.960	0.865	0.844	0.0
334187452		1052	armadillo/beta-catenin-like repeat-conta	0.960	0.871	0.843	0.0

>gi\|255569209\|ref\|XP_002525573.1\| Exportin-7, putative [Ricinus communis] gi\|223535152\|gb\|EEF36832.1\| Exportin-7, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1747 bits (4524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 845/918 (92%), Positives = 885/918 (96%), Gaps = 1/918 (0%)

Query: 1   MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
           MESLAQLEALCERLYNSQDS ERAHAENTLKCFS+NTDYISQCQ+ILDNALTPYALMLAS
Sbjct: 1   MESLAQLEALCERLYNSQDSAERAHAENTLKCFSMNTDYISQCQYILDNALTPYALMLAS 60

Query: 61  SSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDR 120
           SSLLKQVTEHSL+ QLRLDI+NYLINYLA RGPELQ FV ASLIQLLCR+TKFGWFDDDR
Sbjct: 61  SSLLKQVTEHSLSTQLRLDIQNYLINYLATRGPELQPFVIASLIQLLCRVTKFGWFDDDR 120

Query: 121 FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQ 180
           FRD+VKESTNFL QATS+HYAIGLKILNQLVSEMNQPN GLP+T+HRRVACSFRDQSLFQ
Sbjct: 121 FRDVVKESTNFLGQATSNHYAIGLKILNQLVSEMNQPNTGLPATNHRRVACSFRDQSLFQ 180

Query: 181 IFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPV 240
           IFQISLTSL QLK+DV+SRLQELALSL LKCLSFDFVGTSIDESSEEFGTVQIPS+WRPV
Sbjct: 181 IFQISLTSLHQLKNDVSSRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQIPSSWRPV 240

Query: 241 LEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEI 300
           LEDPSTLQIFFDYYAIT APLSKEALECLVRLASVRRSLFTND  RSKFLAHLMTGTKEI
Sbjct: 241 LEDPSTLQIFFDYYAITTAPLSKEALECLVRLASVRRSLFTNDTTRSKFLAHLMTGTKEI 300

Query: 301 LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWAS 360
           LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGY DWIQLVAEFTL SLQSWQWAS
Sbjct: 301 LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYGDWIQLVAEFTLTSLQSWQWAS 360

Query: 361 SSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420
           SSVYYLLGLWS+LVTSVPYLKGDAPS+LDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL
Sbjct: 361 SSVYYLLGLWSKLVTSVPYLKGDAPSMLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420

Query: 421 DNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKL 480
           DNVELLQDQLDCFPYLCRFQYE+SG YIIN MEPILQ+YTERAR+QT D +E++VIEAKL
Sbjct: 421 DNVELLQDQLDCFPYLCRFQYESSGFYIINIMEPILQAYTERARVQTTDGNELAVIEAKL 480

Query: 481 AWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLD 540
           AWIVHIIAAI+KIKQ TGCS ESQE+LDAELSARVLQLINV DSGLHSQRY +LSKQRLD
Sbjct: 481 AWIVHIIAAILKIKQSTGCSAESQEMLDAELSARVLQLINVMDSGLHSQRYGQLSKQRLD 540

Query: 541 RAILTFFQHFRKSYVGDQAMHSSK-LYARLSELLGLHDHLLLLNVIVGKIATNLKCYTES 599
           RAILTFFQHFRKSYVGDQA+HSSK LYARLSELLGLHDHL+LLNVIVGKIATNLKCYTES
Sbjct: 541 RAILTFFQHFRKSYVGDQAVHSSKQLYARLSELLGLHDHLVLLNVIVGKIATNLKCYTES 600

Query: 600 QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYT 659
           +EVIDHTL+LFLELASGYMTGKLLLKLD IKFIVANHTREHFPFLEEYRCSRSRT FYYT
Sbjct: 601 EEVIDHTLNLFLELASGYMTGKLLLKLDAIKFIVANHTREHFPFLEEYRCSRSRTIFYYT 660

Query: 660 IGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATN 719
           IGWLIFME+SPVKFKSSM+PLLQVFISLESTPD+MFR+DAVK ALIGLMRDLRGIAMATN
Sbjct: 661 IGWLIFMEDSPVKFKSSMEPLLQVFISLESTPDAMFRSDAVKFALIGLMRDLRGIAMATN 720

Query: 720 SRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 779
              TYGLLFDWLYPAH+PLLLKGISHW DTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN
Sbjct: 721 RHVTYGLLFDWLYPAHLPLLLKGISHWADTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 780

Query: 780 GILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELY 839
           GILLFREVSKLIVAYG+R+L+LPNAADIYAYKYKG+WIC TIL+RALAGNYVNFGVFELY
Sbjct: 781 GILLFREVSKLIVAYGTRILTLPNAADIYAYKYKGIWICLTILSRALAGNYVNFGVFELY 840

Query: 840 GDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHI 899
           GDRAL+DALDIALK+TLSIPLADILAFRKLT+AYFAFLEVLFSSHI FILNL TNTFMHI
Sbjct: 841 GDRALADALDIALKLTLSIPLADILAFRKLTRAYFAFLEVLFSSHIIFILNLETNTFMHI 900

Query: 900 VGSLESGLKGLDTNISSQ 917
           VGSLESGLKGLDTNISSQ
Sbjct: 901 VGSLESGLKGLDTNISSQ 918

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359494939\|ref\|XP_003634876.1\| PREDICTED: exportin-7-like [Vitis vinifera] gi\|298205126\|emb\|CBI40647.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449458075\|ref\|XP_004146773.1\| PREDICTED: LOW QUALITY PROTEIN: exportin-7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224057198\|ref\|XP_002299168.1\| predicted protein [Populus trichocarpa] gi\|222846426\|gb\|EEE83973.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356507720\|ref\|XP_003522612.1\| PREDICTED: exportin-7-A-like [Glycine max]	Back alignment and taxonomy information

>gi\|356517848\|ref\|XP_003527598.1\| PREDICTED: exportin-7-A-like [Glycine max]	Back alignment and taxonomy information

>gi\|224073084\|ref\|XP_002303964.1\| predicted protein [Populus trichocarpa] gi\|222841396\|gb\|EEE78943.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|30681279\|ref\|NP_196230.2\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332003586\|gb\|AED90969.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334187450\|ref\|NP_001190235.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332003587\|gb\|AED90970.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi|334187452|ref|NP_001190236.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi|334187454|ref|NP_001190237.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi|332003588|gb|AED90971.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi|332003589|gb|AED90972.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		955
TAIR\|locus:2152840		1066	AT5G06120 "AT5G06120" [Arabido	0.960	0.860	0.818	0.0
UNIPROTKB\|E9PEN8		1096	XPO7 "Exportin-7" [Homo sapien	0.825	0.718	0.430	7.7e-207
UNIPROTKB\|J9P0Z1		984	XPO7 "Uncharacterized protein"	0.841	0.817	0.422	6.9e-206
UNIPROTKB\|Q5ZLT0		1087	XPO7 "Exportin-7" [Gallus gall	0.945	0.830	0.439	1.8e-199
UNIPROTKB\|F1NFR4		1092	XPO7 "Exportin-7" [Gallus gall	0.945	0.826	0.439	2.2e-199
ZFIN\|ZDB-GENE-060628-2		1090	xpo7 "exportin 7" [Danio rerio	0.945	0.828	0.441	9.7e-199
UNIPROTKB\|E1C3N1		1084	XPO7 "Exportin-7" [Gallus gall	0.944	0.832	0.439	1.2e-198
MGI\|MGI:1929705		1087	Xpo7 "exportin 7" [Mus musculu	0.945	0.830	0.439	1.6e-198
UNIPROTKB\|A1A4I8		1087	XPO7 "Uncharacterized protein"	0.945	0.830	0.439	3.3e-198
UNIPROTKB\|Q9UIA9		1087	XPO7 "Exportin-7" [Homo sapien	0.945	0.830	0.439	3.3e-198

TAIR\|locus:2152840 AT5G06120 "AT5G06120" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3950 (1395.5 bits), Expect = 0., P = 0.
 Identities = 751/917 (81%), Positives = 834/917 (90%)

Query:     1 MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
             MESLAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQ+ILDN+  PY+LMLAS
Sbjct:     9 MESLAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLAS 68

Query:    61 SSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDR 120
             SSLLKQVT+H+L L LRLDIR Y++NYLA RGP++QSFV ASLIQLLCRLTKFGW DDDR
Sbjct:    69 SSLLKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDR 128

Query:   121 FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQ 180
             FRD+VKESTNFL Q +SDHYAIGL+IL+QLV EMNQPNPGLPSTHHRRVAC+FRDQSLFQ
Sbjct:   129 FRDVVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLFQ 188

Query:   181 IFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPV 240
             +F+I+LTSL  LK+D A RLQELALSL L+C+SFDFVGTSIDES+EEFGTVQIP++WR V
Sbjct:   189 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 248

Query:   241 LEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEI 300
             LED STLQIFFDYY  TE+PLSKEALECLVRLASVRRSLFTNDA RS FLAHLMTGTKEI
Sbjct:   249 LEDSSTLQIFFDYYGSTESPLSKEALECLVRLASVRRSLFTNDATRSNFLAHLMTGTKEI 308

Query:   301 LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWAS 360
             LQTG+GLADHDNYH +CRLLGRFR+NYQLSELV +EGY +WIQLVAEFTLKSLQSWQWAS
Sbjct:   309 LQTGKGLADHDNYHVFCRLLGRFRLNYQLSELVKMEGYGEWIQLVAEFTLKSLQSWQWAS 368

Query:   361 SSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420
             SSVYYLLG+WSRLV SVPYLKGD+PSLLDEFVPKITEGFI SRFNSVQA  PDD +D+PL
Sbjct:   369 SSVYYLLGMWSRLVASVPYLKGDSPSLLDEFVPKITEGFIISRFNSVQASVPDDPTDHPL 428

Query:   421 DNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKL 480
             D VE+LQD+LDCFPYLCRFQYE +G+YIINTMEP+LQSYTER ++Q  D SE+++IEAKL
Sbjct:   429 DKVEVLQDELDCFPYLCRFQYERTGMYIINTMEPLLQSYTERGQLQFADNSELALIEAKL 488

Query:   481 AWXXXXXXXXXXXXQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLD 540
             +W            QC+GCS+E+QEVLDAELSARVL+L+NV DSGLH QRY E+SKQRLD
Sbjct:   489 SWIVHIVAAIVKIKQCSGCSVETQEVLDAELSARVLRLVNVMDSGLHRQRYGEISKQRLD 548

Query:   541 RAILTFFQHFRKSYVGDQAMHSSKLYARXXXXXXXXXXXXXXNVIVGKIATNLKCYTESQ 600
             RAILTFFQ+FRKSYVGDQAMHSSKLYAR              NVIVGKIATNLKCYTES+
Sbjct:   549 RAILTFFQNFRKSYVGDQAMHSSKLYARLKELLGLHDHLVLLNVIVGKIATNLKCYTESE 608

Query:   601 EVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTI 660
             EVI+HTLSLFLELASGYMTGKLLLKLDT+ FI++NHTRE FPFLEEYRCSRSRTTFYYTI
Sbjct:   609 EVINHTLSLFLELASGYMTGKLLLKLDTVTFIISNHTREQFPFLEEYRCSRSRTTFYYTI 668

Query:   661 GWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNS 720
             GWLIFME+S +KFK+SM+PLLQVF +LESTPDSMFRTDAVK ALIGLMRDLRGIAMAT+S
Sbjct:   669 GWLIFMEDSLIKFKTSMEPLLQVFRTLESTPDSMFRTDAVKFALIGLMRDLRGIAMATSS 728

Query:   721 RRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNG 780
             RR+YG LFDWLYPAHMPLLL+G+SHW DTPEVTTPLLKFMAEFV NK QRLTFDSSSPNG
Sbjct:   729 RRSYGFLFDWLYPAHMPLLLRGVSHWFDTPEVTTPLLKFMAEFVHNKTQRLTFDSSSPNG 788

Query:   781 ILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYG 840
             ILLFREVSKLIVAYGSR+L+LPN ADIYA+KYKG+W+  TIL+RAL+GNY NFGVFELYG
Sbjct:   789 ILLFREVSKLIVAYGSRILALPNVADIYAFKYKGIWVSLTILSRALSGNYCNFGVFELYG 848

Query:   841 DRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIV 900
             DRAL+DALDIALKMTL+IPLADILA+RKLTKAYF F+EVL +SHITFIL L+T TFMH+V
Sbjct:   849 DRALADALDIALKMTLAIPLADILAYRKLTKAYFGFVEVLCASHITFILKLDTATFMHLV 908

Query:   901 GSLESGLKGLDTNISSQ 917
             GSLESGLKGLDT+ISSQ
Sbjct:   909 GSLESGLKGLDTSISSQ 925

GO:0000059 "protein import into nucleus, docking" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005643 "nuclear pore" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA;ISS

GO:0006486 "protein glycosylation" evidence=RCA

GO:0009630 "gravitropism" evidence=RCA

UNIPROTKB\|E9PEN8 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|J9P0Z1 XPO7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZLT0 XPO7 "Exportin-7" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NFR4 XPO7 "Exportin-7" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060628-2 xpo7 "exportin 7" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C3N1 XPO7 "Exportin-7" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:1929705 Xpo7 "exportin 7" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|A1A4I8 XPO7 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9UIA9 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9GQN0	RBP16_DROME	No assigned EC number	0.4061	0.9340	0.8123	yes	no
Q9EPK7	XPO7_MOUSE	No assigned EC number	0.4489	0.9434	0.8288	yes	no
Q5ZLT0	XPO7_CHICK	No assigned EC number	0.4514	0.9465	0.8316	yes	no
Q54DN3	XPO7_DICDI	No assigned EC number	0.3641	0.8691	0.8242	yes	no
Q9UIA9	XPO7_HUMAN	No assigned EC number	0.4503	0.9465	0.8316	yes	no
Q5R9G4	XPO7_PONAB	No assigned EC number	0.4478	0.9434	0.8288	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_I000067	hypothetical protein (1049 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		955
smart00913		67	smart00913, IBN_N, Importin-beta N-terminal domain	2e-05
pfam03810		71	pfam03810, IBN_N, Importin-beta N-terminal domain	6e-05

>gnl\|CDD\|197981 smart00913, IBN_N, Importin-beta N-terminal domain	Back alignment and domain information

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 26 AENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEH--SLALQLRLDIRNY 83
          AE  L+ F  +  +      IL N+   Y   LA+ +L  ++T    SL  + + +I+N 
Sbjct: 1  AEKQLEQFQKSPGFWLLLLEILANSEDQYVRQLAAITLKNKITRRWSSLPEEEKEEIKNS 60

Query: 84 LINYLAK 90
          L+  L  
Sbjct: 61 LLELLLS 67

Members of the importin-beta (karyopherin-beta) family can bind and transport cargo by themselves, or can form heterodimers with importin-alpha. As part of a heterodimer, importin-beta mediates interactions with the pore complex, while importin-alpha acts as an adaptor protein to bind the nuclear localisation signal (NLS) on the cargo through the classical NLS import of proteins. Importin-beta is a helicoidal molecule constructed from 19 HEAT repeats. Many nuclear pore proteins contain FG sequence repeats that can bind to HEAT repeats within importins.. which is important for importin-beta mediated transport. Length = 67

>gnl\|CDD\|217743 pfam03810, IBN_N, Importin-beta N-terminal domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		955
KOG1410		1082	consensus Nuclear transport receptor RanBP16 (impo	100.0
COG5101		1053	CRM1 Importin beta-related nuclear transport recep	100.0
KOG2020		1041	consensus Nuclear transport receptor CRM1/MSN5 (im	100.0
KOG4541		748	consensus Nuclear transport receptor exportin 4 (i	100.0
KOG2022		982	consensus Nuclear transport receptor LGL2 (importi	99.84
KOG2021		980	consensus Nuclear mRNA export factor receptor LOS1	99.8
PF08767		319	CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1	99.64
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	99.33
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	99.17
KOG1991		1010	consensus Nuclear transport receptor RANBP7/RANBP8	99.16
PF08389		148	Xpo1: Exportin 1-like protein; InterPro: IPR013598	99.03
KOG2081		559	consensus Nuclear transport regulator [Intracellul	98.87
KOG1992		960	consensus Nuclear export receptor CSE1/CAS (import	98.79
PF03810		77	IBN_N: Importin-beta N-terminal domain; InterPro:	98.23
KOG1241		859	consensus Karyopherin (importin) beta 1 [Nuclear s	98.04
KOG1993		978	consensus Nuclear transport receptor KAP120 (impor	97.48
COG5656		970	SXM1 Importin, protein involved in nuclear import	97.38
COG5657		947	CSE1 CAS/CSE protein involved in chromosome segreg	96.83
KOG2274		1005	consensus Predicted importin 9 [Intracellular traf	94.01
KOG4541		748	consensus Nuclear transport receptor exportin 4 (i	85.63
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	84.3

>KOG1410 consensus Nuclear transport receptor RanBP16 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=1.1e-167  Score=1342.87  Aligned_cols=927  Identities=50%  Similarity=0.826  Sum_probs=883.1

Q ss_pred             CchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhccCcccHHHHHHHHhcCCChhHHHHHHHHHHHHHhh-cCCCHHHHHH
Q 002190            1 MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTE-HSLALQLRLD   79 (955)
Q Consensus         1 ~~~l~~lE~~~~~l~~~~~~~~r~~Ae~~L~~f~~~~~~~~~~~~IL~~S~~~~~~f~a~~~L~~~i~~-~~l~~~~k~~   79 (955)
                      |+++++||.+|..+|.++|+.+|.+||+.|.+|.++|+++++|+.+|++++.+|.+..|++.|.+.+.+ ..+|.++|.+
T Consensus         1 m~sLaqLe~lCk~LY~s~D~~~R~~AE~~L~e~s~speclskCqlll~~gs~pYs~mlAst~L~Klvs~~t~lpl~qrld   80 (1082)
T KOG1410|consen    1 MQSLAQLESLCKDLYESTDPTARHRAEKALAELSESPECLSKCQLLLERGSYPYSQMLASTCLMKLVSRKTPLPLEQRLD   80 (1082)
T ss_pred             CccHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHcCCCCCcHHHHHH
Confidence            689999999999999999999999999999999999999999999999999999999999999999999 7899999999


Q ss_pred             HHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHhhccCCCh----hhhhHHHHHHHHHhcccchhHHHHHHHHHHHHhccc
Q 002190           80 IRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDD----RFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMN  155 (955)
Q Consensus        80 ir~~ll~~l~~~~~~~~~~v~~~l~~~la~i~K~~W~~~~----~~~~~i~~i~~~l~~~~~~~~~~gl~lL~~lv~ef~  155 (955)
                      ||+|+++|+..++|++++||...+++++|+++|.||++..    ++|+.+.++.++++.++.+++++|+.||+.+++||+
T Consensus        81 ir~Yilnylat~~Pk~~~fvi~sLiQl~arlTK~gW~d~~k~~y~FRd~v~~~~kfl~~~~ve~~~igv~iLsqLvqemN  160 (1082)
T KOG1410|consen   81 IRNYILNYLATGAPKLAPFVIQSLIQLFARLTKLGWFDQQKDEYVFRDPVDDVTKFLQMDNVEHCIIGVQILSQLVQEMN  160 (1082)
T ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHhccccccccccchhhhhHHHHHHHhccCchHHHHHHHHHHHHHHHHhh
Confidence            9999999999988999999999999999999999998864    789999999999987889999999999999999999


Q ss_pred             CCCCCCchHHhHhhhhhcchhchHHHHHHHHHHHhhhh-----hhhHHHHHHHHHHHHhHhccccccccCCCCCcCcccc
Q 002190          156 QPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLK-----SDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGT  230 (955)
Q Consensus       156 ~~~~~~~~~~h~k~~~~f~~~~L~~if~~~~~~L~~~~-----~~~~~~l~~~~L~l~~~~Lsw~f~~~~~de~~~~~~~  230 (955)
                      +.+.+.+..+|||...+|||+.|.+||.+++.+|+...     ++.+..+..++|++..+||+|||+|++.||++||.++
T Consensus       161 ~~~~~~p~tkHRkias~FRD~sL~~vf~laln~L~~~~~~nlnd~~q~~L~~~vL~L~l~Cl~FDfiGss~DEssed~ct  240 (1082)
T KOG1410|consen  161 QADGMDPSTKHRKIASSFRDDSLFDVFSLALNLLKDNVDLNLNDRAQLGLLMQVLKLNLNCLNFDFIGSSTDESSEDLCT  240 (1082)
T ss_pred             CCCCCCcchHHHHHHhhhhhhHHHHHHHHHHHHHHHhcccCcccHhHhhHHHHHHHHHhhhccccccccccccccccccc
Confidence            99999999999999999999999999999999999875     2234579999999999999999999999999999999


Q ss_pred             ccCCCcccccccCcchHHHHHHHHhhcCCcchHHHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHhhcCcCCCCc
Q 002190          231 VQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADH  310 (955)
Q Consensus       231 ~~~p~~W~~~l~~~~~l~~lf~~~~~~~~~l~~~~l~cL~~l~sl~~~~f~~~~~~~~~l~~~l~~~~~il~~~~~l~~~  310 (955)
                      +++|.+||..+.|++.+++||++|...+|+++..++.||+|+||+|+++|++ .+|.+|++++++|+..++++++|++|+
T Consensus       241 VQIPTsWRs~f~d~stlqlfFdly~slp~~~S~~alsclvqlASvRRsLFN~-aeRa~yl~~Lv~Gvk~il~np~~LsD~  319 (1082)
T KOG1410|consen  241 VQIPTSWRSSFLDSSTLQLFFDLYHSLPPELSELALSCLVQLASVRRSLFNG-AERAKYLQHLVEGVKRILENPQGLSDP  319 (1082)
T ss_pred             eecCcHHHHHhcCchHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhCCcCCCCc
Confidence            9999999999999999999999999889999999999999999999999966 789999999999999999999999999


Q ss_pred             chHHHHHHHHHHhhhhcchhhhhcccChHHHHHHHHHHHHHHhhhhccccCcHHHHHHHHHHhhcCcccccCCCcchhhh
Q 002190          311 DNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDE  390 (955)
Q Consensus       311 e~~~~~~~ll~rl~~~~~~~~l~~~~~~~~fl~~l~~~t~~~l~~~~~~~~~~~~lL~~W~~l~~~~~~~~~~~~~~l~~  390 (955)
                      +.||+|||++.|+++||++.+|.+.++|++|++.++.||+.+++.|.|.+++.+|+|.+|.+++.+.||++++.|+.++.
T Consensus       320 ~nyHeFCRllaRlktNYQL~ELv~v~~Y~e~irLiAeFTv~SLq~wefa~nSvyyLlt~WqRmvaSVPyvk~~~phlLd~  399 (1082)
T KOG1410|consen  320 ANYHEFCRLLARLKTNYQLGELVKVECYPEVIRLIAEFTVTSLQHWEFAPNSVYYLLTLWQRMVASVPYVKNTEPHLLDT  399 (1082)
T ss_pred             chHHHHHHHHHHHHhhhhhHhhhccCCcHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHhcCCcccCCChHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhccccccccccCCCCCCCCCCCHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHhhcCCCCc
Q 002190          391 FVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDK  470 (955)
Q Consensus       391 ~~~~I~~~yi~~~l~~~~~~~~ee~~e~~~~d~~~~~~~le~i~~l~r~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  470 (955)
                      |+|+|.++||.+|++.++..+.|+ .|+|+||.+...+++|.+++++|+.|+.|+.++.++|++..+.|++.......++
T Consensus       400 y~PeIt~afi~SRl~sV~~ivrd~-~d~PLdd~~~~~q~le~l~~icRceYEkTc~llvq~fdq~aqsyqe~~~~~s~~~  478 (1082)
T KOG1410|consen  400 YCPEITKAFITSRLQSVEIIVRDG-LDDPLDDTGAVQQQLEQLATICRCEYEKTCALLVQLFDQNAQSYQELLQNGSAND  478 (1082)
T ss_pred             hcHHHHHHHHHHHhhhhheecccC-CCCcchhhHHHHHHHHHhhhhhhhhHhhHHHHHHHHHhhhHHHHHHHhcccCCCc
Confidence            999999999999999987665555 6899999999999999999999999999999999999999999998755444466


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhccccccCCCccccccchHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHH
Q 002190          471 SEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHF  550 (955)
Q Consensus       471 ~~l~~~~e~L~wli~i~g~~l~~~~~~~~~~~~~~~~d~~L~~~v~~l~~~~~~~~~~~~~~~~s~~~l~~a~l~Fl~~~  550 (955)
                      .++.+.|.+|.|+++++|.+++|+ .++++.++++++||+|+++|++++++.|...     +..+.+|++.|++||+++|
T Consensus       479 ~d~ai~EgrL~Wlv~lvgtvV~gk-~t~~Std~~d~mDgEL~arvlql~nlmdsr~-----~~~~n~rle~ail~f~eqF  552 (1082)
T KOG1410|consen  479 ADIAIQEGRLVWLVYLVGTVVGGK-TTATSTDEHDAMDGELSARVLQLVNLMDSRL-----PLKGNERLELAILHFLEQF  552 (1082)
T ss_pred             hhHHHHhhhhhhhHHHhHHHhcce-ecccccchhhhhhhHHHHHHHHHHHhhhccc-----chhhhHHHHHHHHHHHHHH
Confidence            677889999999999999999999 6667789999999999999999999988755     4556799999999999999


Q ss_pred             HHHHhccccccchHHHHHHHHhhCCCchHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHhccccchhhhccchhHH
Q 002190          551 RKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIK  630 (955)
Q Consensus       551 ~~~yl~~~~~~~~k~~~~l~~~~g~~d~~~~~~~~l~ki~~~L~~~~~~~~li~~~~~Ll~~l~~~~~~~~~l~~~~~~~  630 (955)
                      +++|+|++.++++|+|.+++|.+|..|...++++++.||.+||++|+..++++..+++||.+++.|++.+|+++++|.|+
T Consensus       553 Rk~YvgDQ~~rsSkvY~rl~e~Lgi~de~~~L~viv~KI~TNLK~w~~~e~vi~~tLslf~dLs~GY~~~kkL~kl~~Vq  632 (1082)
T KOG1410|consen  553 RKAYVGDQIQRSSKVYARLSEVLGITDESDVLGVIVGKILTNLKYWGRNEPVISLTLSLFNDLSLGYSAVKKLVKLDAVQ  632 (1082)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHhhhHHHHHHHhcchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCCcccc---cccchhhHHHHHHHHHHhcC--CChHHHHHhhHHHHHHHHHhc-cCCCccCCcHHHHHHH
Q 002190          631 FIVANHTREHFPFLEEY---RCSRSRTTFYYTIGWLIFME--ESPVKFKSSMDPLLQVFISLE-STPDSMFRTDAVKCAL  704 (955)
Q Consensus       631 ~ll~~~~~~~~~~l~~~---~~~k~r~~~y~al~~i~~~~--~~~~~~~~~l~p~~~~~~~i~-~~~~~~~~~~~~~~~i  704 (955)
                      .+++||++++|+||+..   +..|+||+||.|+|++++.|  +++..|++||.|+.+.|..+. .-+...++.+++|..+
T Consensus       633 fmlnNHT~ehF~FLg~~~~~~~~r~RTTFY~al~rLl~~d~sede~~fe~fm~PLt~~fe~v~~~~~nn~f~ee~vK~~l  712 (1082)
T KOG1410|consen  633 FMLNNHTSEHFPFLGINIDLQDMRCRTTFYTALTRLLMVDLSEDEDMFERFMLPLTDAFEGVLQVFQNNCFEEEQVKRIL  712 (1082)
T ss_pred             hHhcccchhhCcccccCccchhhhhHhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence            99999999999999865   66899999999999999887  457899999999999999875 1222469999999999


Q ss_pred             HHHHHHHhhhhhhhccchhHHHHHHHHhhcchHHHHHhhhhhcCCCcchHHHHHHHHHHHhcccceeeecCCCcchhHHH
Q 002190          705 IGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLF  784 (955)
Q Consensus       705 ~~~l~~l~Gi~~a~~~~~~~~~~f~~i~~~~~~~~~~l~~~y~~~~~v~~~iLkl~~~~~~n~~~ri~~~~~s~~~~~lf  784 (955)
                      +++.||+|||+.|.+.+.+|.++|+|+||.+++++...++.|.++|+++++||||++|+++||+||+.|+.+||+|++||
T Consensus       713 iGL~RDLRGiA~A~~tktsy~~LFdWmYP~~mpllq~~Ve~W~~~p~vtTPiLklmaE~v~NrsQRL~Fd~SSpngiLLF  792 (1082)
T KOG1410|consen  713 IGLCRDLRGIAFASNTKTSYQMLFDWMYPEYMPLLQRAVEKWYGCPDVTTPILKLMAELVQNRSQRLKFDVSSPNGILLF  792 (1082)
T ss_pred             HHHHHHhhhhhhhhccchHHHHHHHHhhhhHHHHHHHHHHhcCCCCccccHHHHHHHHHHhhhHhheecccCCCceeEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCC--cchhhhhhhhhHHHHHHHHHHhhcCCccccccccccCCCcHHHHHHHHHHHhcccChhh
Q 002190          785 REVSKLIVAYGSRVLSLPN--AADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLAD  862 (955)
Q Consensus       785 ~~~~~il~~y~~~~~~~~~--~~~~~~e~~k~l~~~l~il~~~l~~~~vnfg~~~~y~d~~~~~~l~~~l~l~l~ip~~d  862 (955)
                      |+.++++..||.+++++|+  +...|+++||+|.+|+.++.++++|+|||||||++|||+.+.+++..++.++++||..|
T Consensus       793 rEtSKmv~~YG~riL~Lp~vskdqiY~~kyKgI~v~~siLk~AL~GnYv~FGVFrLYGD~~l~daL~~fvKm~lsIp~sD  872 (1082)
T KOG1410|consen  793 RETSKMVSIYGNRILQLPEVSKDQIYAEKYKGISVCFSILKNALSGNYVNFGVFRLYGDSALDDALQTFVKMLLSIPHSD  872 (1082)
T ss_pred             hhhhHHHHHHhhHhhcccCcchhhhHHHHhcCceehHHHHHHHhhcCccccceeeeeCchHHHHHHHHHHHHHhcCCHHH
Confidence            9999999999999999985  44479999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHHHHhhhHHhhhcCChHHHHHHHHHHHHhhccccHHHHhhhhcccccccccccceeeccccc
Q 002190          863 ILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCPFRFSLECL  939 (955)
Q Consensus       863 l~~yPkl~~~~f~ll~~~~~~~~~~l~~l~~~~f~~~~~sl~~gl~~~~~~i~~~~l~~~~~~l~~l~~~~~~~~~~  939 (955)
                      +++|||+.++||.+++.+++.|+.++.+|+|+.|-.++.||..||++-|+-|+..||.+    +|++++|.|++-..
T Consensus       873 ~l~Y~Klsqsyy~llE~l~qdhm~Fi~nL~~~vfm~ll~Si~sGLt~lDt~v~ssccss----lD~i~tYlfk~itr  945 (1082)
T KOG1410|consen  873 LLSYRKLSQSYYNLLEVLTQDHMPFITNLEPDVFMYLLRSISSGLTSLDTIVSSSCCSS----LDTIVTYLFKRITR  945 (1082)
T ss_pred             HHhHHHHHHHHhhHHHHHHhccchhhhcCcHHHHHHHHHHHHhccchhhHHHHhHHHHH----HHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999    99999999998654

>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]	Back alignment and domain information

>KOG2020 consensus Nuclear transport receptor CRM1/MSN5 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4541 consensus Nuclear transport receptor exportin 4 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2022 consensus Nuclear transport receptor LGL2 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2021 consensus Nuclear mRNA export factor receptor LOS1/Exportin-t (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport; Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES)	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane	Back alignment and domain information

>KOG2081 consensus Nuclear transport regulator [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1992 consensus Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03810 IBN_N: Importin-beta N-terminal domain; InterPro: IPR001494 Karyopherins are a group of proteins involved in transporting molecules through the pores of the nuclear envelope	Back alignment and domain information

>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1993 consensus Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure]	Back alignment and domain information

>KOG4541 consensus Nuclear transport receptor exportin 4 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		955
3m1i_C		1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	5e-25
3a6p_A		1204	Exportin-5; exportin-5, RANGTP, nuclearexport, imp	4e-17
3gjx_A		1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	9e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
2x19_B		963	Importin-13; nuclear transport, protein transport;	6e-13
3ibv_A		980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	1e-07
2x1g_F		971	Cadmus; transport protein, developmental protein,	4e-06

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Length = 1049	Back alignment and structure

 Score =  111 bits (278), Expect = 5e-25
 Identities = 112/941 (11%), Positives = 281/941 (29%), Gaps = 110/941 (11%)

Query: 3   SLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSS 62
            +A L+ +    Y      ++  A+  L  F  N D   +   IL  +  P +  +A S 
Sbjct: 14  DIALLDQVVSTFYQGSGV-QQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSI 72

Query: 63  LLKQVTEH--SLALQLRLDIRNYLINYLAKRGPELQSFVTASLI-----QLLCRLTKFGW 115
           L K +T     L    R+ IRN+++  +     + + F T   +       L ++ K  W
Sbjct: 73  LDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEW 132

Query: 116 FDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRD 175
                + + + E     S  + +     + +L  L  E+   +    +        +   
Sbjct: 133 --PQNWPEFIPELIGSSSS-SVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMS 189

Query: 176 QSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPS 235
           +   QIF++       L+   +S L    L   L+ L +                     
Sbjct: 190 KEFEQIFKLCFQ---VLEQGSSSSLIVATLESLLRYLHWIPYR----------------- 229

Query: 236 AWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMT 295
                + + + L++    + +T        L+CL  +++++     ND  + + +     
Sbjct: 230 ----YIYETNILELLSTKF-MTSPDTRAITLKCLTEVSNLKIPQD-NDLIKRQTVLFFQN 283

Query: 296 GTKEILQ---------TGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVA 346
             ++I                  + N   + + L  F   Y       +E      +L+ 
Sbjct: 284 TLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLL 343

Query: 347 EFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNS 406
                 +Q  +     ++     +   + +  + +     + +E   ++    I +    
Sbjct: 344 NAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMV-- 401

Query: 407 VQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQ 466
                P+++     D  E++++ +     +  ++ E   L  +  +  I       +++ 
Sbjct: 402 ----RPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLA 457

Query: 467 TGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGL 526
                               I +I         S ++++     +   +L L        
Sbjct: 458 RQIDGSEWSWHNINTLS-WAIGSISG-----TMSEDTEKRFVVTVIKDLLDLT------- 504

Query: 527 HSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIV 586
             ++  + +K  +   I+     + +                      L  H   L  ++
Sbjct: 505 -VKKRGKDNKAVVASDIMYVVGQYPRF---------------------LKAHWNFLRTVI 542

Query: 587 GKIATNLKCYTES-QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLE 645
            K+   +    E  Q++   T    ++    +   +   + +     +    ++    L+
Sbjct: 543 LKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQ 602

Query: 646 EYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALI 705
                +   TFY   G +I  E S  +    +  L+Q+      T       +       
Sbjct: 603 ----PQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDS 658

Query: 706 GLMRDLRGI-----AMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFM 760
             ++ +  I     A+ T+    +      +Y   + L     S  +        +    
Sbjct: 659 ETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKT 718

Query: 761 AEFVLN---KAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWI 817
            +       K + L    +  +      +V K++V      +      ++   +   +  
Sbjct: 719 PKVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLN 778

Query: 818 CFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFL 877
           C T +   +                 +   L    + TL +   D   + +    ++  L
Sbjct: 779 CMTTVVEKVGHMIPQG----------VILILQSVFECTLDMINKDFTEYPEHRVEFYKLL 828

Query: 878 EVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQV 918
           +V+        L L    F   V ++    K  + ++    
Sbjct: 829 KVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNG 869

PyMOL of 3m1i

>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens} Length = 1204	Back alignment and structure

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Length = 1073	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Length = 963	Back alignment and structure

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Length = 980	Back alignment and structure

>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Length = 971	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		955
3gjx_A		1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	100.0
4hat_C		1023	Exportin-1; heat repeat, nuclear export, RAN-ranbp	100.0
2x19_B		963	Importin-13; nuclear transport, protein transport;	100.0
3m1i_C		1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	100.0
3ibv_A		980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	100.0
2x1g_F		971	Cadmus; transport protein, developmental protein,	99.98
3a6p_A		1204	Exportin-5; exportin-5, RANGTP, nuclearexport, imp	99.94
1w9c_A		321	CRM1 protein, exportin 1; nuclear protein, nuclear	99.75
1wa5_C		960	Importin alpha RE-exporter; nuclear transport/comp	99.67
4fdd_A		852	Transportin-1; heat repeats, karyopherin, nuclear	99.67
2bpt_A		861	Importin beta-1 subunit; nuclear transport, nucleo	99.46
1qgr_A		876	Protein (importin beta subunit); transport recepto	99.02
1ibr_B		462	P95, importin beta-1 subunit, nuclear factor; smal	98.79
1u6g_C		1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	93.43

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A	Back alignment and structure

Probab=100.00  E-value=4.1e-59  Score=578.52  Aligned_cols=798  Identities=15%  Similarity=0.206  Sum_probs=573.6

Q ss_pred             hHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhccCcccHHHHHHHHhcCCChhHHHHHHHHHHHHHhh--cCCCHHHHHHH
Q 002190            3 SLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTE--HSLALQLRLDI   80 (955)
Q Consensus         3 ~l~~lE~~~~~l~~~~~~~~r~~Ae~~L~~f~~~~~~~~~~~~IL~~S~~~~~~f~a~~~L~~~i~~--~~l~~~~k~~i   80 (955)
                      |++.||+++.++|+| ++++|++|+++|.+|+++|++|..|..||++|++++++|||+++|++.|++  +.+|+++|.+|
T Consensus        26 Dv~~Le~lv~~ly~p-~~~~r~qA~~~L~q~q~sp~aw~~~~~iL~~s~~~~vR~fAa~~L~~~I~~~W~~L~~e~~~~L  104 (1073)
T 3gjx_A           26 DINLLDNVVNCLYHG-EGAQQRMAQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGI  104 (1073)
T ss_dssp             SHHHHHHHHHTTTCS-SHHHHHHHHHHHHTSSCCSCHHHHHTCC---CCSHHHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             CHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhhCCHHHHHHH
Confidence            689999999999987 478999999999999999999999999999999999999999999999996  88999999999


Q ss_pred             HHHHHHHHHhcCCC-----chHHHHHHHHHHHHHHHhhccCCChhhhhHHHHHHHHHhcccchhHHHHHHHHHHHHhccc
Q 002190           81 RNYLINYLAKRGPE-----LQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMN  155 (955)
Q Consensus        81 r~~ll~~l~~~~~~-----~~~~v~~~l~~~la~i~K~~W~~~~~~~~~i~~i~~~l~~~~~~~~~~gl~lL~~lv~ef~  155 (955)
                      |+++++++.+.+.+     .++.+++|++.++|.|+|++||+.||  ++++++.+.++ .++.++..+|.+|..+.+|..
T Consensus       105 R~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~Wp--~fi~dLv~~~~-~~~~~~~~~L~IL~~L~EEV~  181 (1073)
T 3gjx_A          105 KKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWP--TFISDIVGASR-TSESLCQNNMVILKLLSEEVF  181 (1073)
T ss_dssp             HHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTTCT--THHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHccCccccccchHHHHHHHHHHHHHHHHhChhhcc--HHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHH
Confidence            99999999874322     23677799999999999999999998  89999988874 466778888899888888843


Q ss_pred             CC-CCCCchHHhHhhhhhcchhchHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhHhccccccccCCCCCcCccccccCC
Q 002190          156 QP-NPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIP  234 (955)
Q Consensus       156 ~~-~~~~~~~~h~k~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~l~~~~L~l~~~~Lsw~f~~~~~de~~~~~~~~~~p  234 (955)
                      .. ...++..+..+.+..++.. ++.|++++..+|++..+   ..++..+|+++..+++|...+..              
T Consensus       182 d~~~~~l~~~r~~~lk~~L~~~-~~~Il~ll~~iL~~~~~---~~lv~~~L~~L~~~~sWI~i~~i--------------  243 (1073)
T 3gjx_A          182 DFSSGQITQVKAKHLKDSMCNE-FSQIFQLCQFVMENSQN---APLVHATLETLLRFLNWIPLGYI--------------  243 (1073)
T ss_dssp             TSHHHHBCHHHHHHHHHHHHHT-CHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHTTTSCTHHH--------------
T ss_pred             hcccccccHHHHHHHHHHHHHH-HHHHHHHHHHHhcccCC---HHHHHHHHHHHHHHHHhcCHHHh--------------
Confidence            21 1112334445556667775 89999999888875432   36888999999999999886542              


Q ss_pred             CcccccccCcchHHHHHHHHhhcCCcchHHHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHhhcCcCC-------
Q 002190          235 SAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGL-------  307 (955)
Q Consensus       235 ~~W~~~l~~~~~l~~lf~~~~~~~~~l~~~~l~cL~~l~sl~~~~f~~~~~~~~~l~~~l~~~~~il~~~~~l-------  307 (955)
                             .+++++++++..+ ...+.++..|++||.++++.+.+-+  ++.....+..++..+..+++....+       
T Consensus       244 -------~~~~ll~~L~~~~-L~~~~~r~aA~dcL~eIv~k~~~~~--~~~~~~lf~~~~~~i~~ilp~~~~l~~~y~~~  313 (1073)
T 3gjx_A          244 -------FETKLISTLIYKF-LNVPMFRNVSLKCLTEIAGVSVSQY--EEQFETLFTLTMMQLKQMLPLNTNIRLAYSNG  313 (1073)
T ss_dssp             -------HSSSHHHHHHHHT-SSSHHHHHHHHHHHHHHHHSCSGGG--HHHHHHHHHHHHHHHHHHSCTTSCHHHHHHTC
T ss_pred             -------ccchHHHHHHHHh-cCChHHHHHHHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHhcCCchhHHHHHhcc
Confidence                   4466898874222 2567899999999999999752211  2233455666666666676643211       


Q ss_pred             --CCcchHHHHHHHHHHhhhhcchhhhhcccChHHHHHHHHHHHHHHhhhhccccCcHHHHHHHHHHhhcCcccccCC--
Q 002190          308 --ADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGD--  383 (955)
Q Consensus       308 --~~~e~~~~~~~ll~rl~~~~~~~~l~~~~~~~~fl~~l~~~t~~~l~~~~~~~~~~~~lL~~W~~l~~~~~~~~~~--  383 (955)
                        .|++..+++|+++..+.++|. ..+.+.|.+...+....++...+-...  +.|.++++++||..++.++ |.+.+  
T Consensus       314 ~~~d~e~~~~l~~~f~~~~e~~~-~lIe~~p~~~~~l~~~l~~ll~~s~~~--d~ei~kitf~fW~~L~~~L-~~e~~~~  389 (1073)
T 3gjx_A          314 KDDEQNFIQNLSLFLCTFLKEHG-QLLEKRLNLREALMEALHYMLLVSEVE--ETEIFKICLEYWNHLAAEL-YRESPFS  389 (1073)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHH-HHHHHCGGGHHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHH-HHHCCSC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHH-HHHhcCccchHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHH-Hhhcccc
Confidence              234566778999999999883 555555555555555444445443332  3578899999999998865 21110  


Q ss_pred             ---C-----------cch---hhhhHHHHHHHHHhccccccccccC-C-CCCCC---CCCCH---HHHHHHHhhhhhhhh
Q 002190          384 ---A-----------PSL---LDEFVPKITEGFITSRFNSVQAGFP-D-DLSDN---PLDNV---ELLQDQLDCFPYLCR  438 (955)
Q Consensus       384 ---~-----------~~~---l~~~~~~I~~~yi~~~l~~~~~~~~-e-e~~e~---~~~d~---~~~~~~le~i~~l~r  438 (955)
                         .           +..   ...+..++.... .+||++|++++. | |.+|-   ..+|.   ..++.+.+++.++++
T Consensus       390 ~~~~~~~~~~~~~~~~~~~~~y~~i~~~L~~vl-I~~m~~P~ev~i~e~e~ge~~re~~~d~~~~~ly~~mrd~L~~lt~  468 (1073)
T 3gjx_A          390 TSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM-VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTH  468 (1073)
T ss_dssp             CCCSSCTTSSCCSCSCHHHHTTHHHHHHHHHHH-HHTCCCSCCEEEEECSSSCEEEEECSSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhHHHHHHHHHHHHHHHH-HHhcCCCccccccCcccchHHHHHHhhcchHHHHHHHHHHHHHHhc
Confidence               0           111   233345666664 499999986543 3 22221   23443   356788899999999


Q ss_pred             cchhhHHHHHHHhHHHHHHHHHHHhhcCCCCchhhhHHHHHHHHHHHHHHHHhhccccccCCCccccccchHHHHHHHHH
Q 002190          439 FQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQL  518 (955)
Q Consensus       439 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~e~L~wli~i~g~~l~~~~~~~~~~~~~~~~d~~L~~~v~~l  518 (955)
                      +.++++.+++++.+.+.++       .++++|+.++    .++|+++   ++.|..      .++.|+  ..|...+-.+
T Consensus       469 l~~~~~~~i~~~~l~~~~~-------~~~~sW~~le----a~~~aig---aIag~~------~~~~E~--~~Lp~vi~~L  526 (1073)
T 3gjx_A          469 LDYVDTEIIMTKKLQNQVN-------GTEWSWKNLN----TLCWAIG---SISGAM------HEEDEK--RFLVTVIKDL  526 (1073)
T ss_dssp             HCHHHHHHHHHHHHHHHHT-------SCCCCHHHHH----HHHHHHH---HTTTSS------CHHHHH--HHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhc-------CCCCCHHHHh----HHHHHHH---HHHCcC------Cccccc--chHHHHHHHH
Confidence            9999999999988887422       3456787665    8999995   444433      222232  3566666556


Q ss_pred             Hhhccccc-------cccc--cccchhhHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHhh-CCCchHHHHHHHHHH
Q 002190          519 INVTDSGL-------HSQR--YCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELL-GLHDHLLLLNVIVGK  588 (955)
Q Consensus       519 ~~~~~~~~-------~~~~--~~~~s~~~l~~a~l~Fl~~~~~~yl~~~~~~~~k~~~~l~~~~-g~~d~~~~~~~~l~k  588 (955)
                      +++.+..-       -+++  +..+.|||+..+++.||+.    .+       .+++++|++.+ |+++  +++++|.+.
T Consensus       527 l~L~e~~~~kd~k~~vas~i~~vlgrY~~wl~~h~~~L~~----vl-------~~L~~~m~~~~~~vq~--aA~~af~~i  593 (1073)
T 3gjx_A          527 LGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKT----VV-------NKLFEFMHETHDGVQD--MACDTFIKI  593 (1073)
T ss_dssp             HHHHHHSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHH----HH-------HHHHHHTTCCSTTHHH--HHHHHHHHH
T ss_pred             hcccccccccchhHHHHHHHHHHHhhhHHHHHhCHHHHHH----HH-------HHHHHHHhcCCHHHHH--HHHHHHHHH
Confidence            66553221       1222  4566788888888888873    43       66777777654 5566  677777653


Q ss_pred             HHhcccCCCCchHHHHHHHHHHHHHhccccchhh-hc------cchhHHHHHHhcccCCCCCcccccccchhhHHHHHHH
Q 002190          589 IATNLKCYTESQEVIDHTLSLFLELASGYMTGKL-LL------KLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIG  661 (955)
Q Consensus       589 i~~~L~~~~~~~~li~~~~~Ll~~l~~~~~~~~~-l~------~~~~~~~ll~~~~~~~~~~l~~~~~~k~r~~~y~al~  661 (955)
                      ...                            |+. +.      ..|.+..+++..... +.-++    .+....+|+++|
T Consensus       594 ~~~----------------------------C~~~lv~~~~~e~~p~i~~il~~~~~~-~~~l~----~~~~~~lyeav~  640 (1073)
T 3gjx_A          594 AQK----------------------------CRRHFVQVQVGEVMPFIDEILNNINTI-ICDLQ----PQQVHTFYEAVG  640 (1073)
T ss_dssp             HHH----------------------------TGGGGTSCCTTCSSCHHHHHHTSHHHH-HTTCC----HHHHHHHHHHHH
T ss_pred             HHH----------------------------HHHHHhhccccccchHHHHHHHHHHHH-HHhcC----HHHHHHHHHHHH
Confidence            322                            221 11      245667777655431 12232    556689999999


Q ss_pred             HHHhcCC----ChHHHHHhhHHHHHHHHHhcc---CCCccCCcHHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHhhc
Q 002190          662 WLIFMEE----SPVKFKSSMDPLLQVFISLES---TPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPA  734 (955)
Q Consensus       662 ~i~~~~~----~~~~~~~~l~p~~~~~~~i~~---~~~~~~~~~~~~~~i~~~l~~l~Gi~~a~~~~~~~~~~f~~i~~~  734 (955)
                      .++...+    +.++++.+|.|+.++|+++..   ++.+.+.|++..+++..+++++.++|.+++.  .|..++.-++|+
T Consensus       641 ~vi~~~p~~~~~~~~i~~Lm~~~~~~w~~l~~~~~~~~~~~~d~~~i~~l~~il~~n~~v~~~~g~--~f~~~~~~i~~~  718 (1073)
T 3gjx_A          641 YMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGH--PFVIQLGRIYLD  718 (1073)
T ss_dssp             HHHTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHH
T ss_pred             HHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHhhcCchhccChHHHHHHHHHHhhhHHHHhhcch--hHHHHHHHHHHH
Confidence            9986543    467899999999999999973   2346778888889999999999999999987  466666667776


Q ss_pred             chHHH---HHhhhhh--------cCCCc------chHHHHHHHHHHHhcccceeeecCCCcchhHHHHHHHHHHHHHHHh
Q 002190          735 HMPLL---LKGISHW--------TDTPE------VTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSR  797 (955)
Q Consensus       735 ~~~~~---~~l~~~y--------~~~~~------v~~~iLkl~~~~~~n~~~ri~~~~~s~~~~~lf~~~~~il~~y~~~  797 (955)
                      +.+.+   .+.+...        ...|.      +-..||||+..++.+. ....    .....++-..+..++.+|.++
T Consensus       719 ~l~~y~~~s~~i~~~v~~~g~~~~~~~~~~~~r~ik~eil~l~~~~i~~~-~~~~----~v~~~~i~pl~~~vl~dY~~~  793 (1073)
T 3gjx_A          719 MLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRS-NDPQ----MVAENFVPPLLDAVLIDYQRN  793 (1073)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCGGGGSSHHHHHHHHHHHHHHHHHHHHHTTC-SCHH----HHHHHTSHHHHHHTHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhCCchhhccHHHHHHHHHHHHHHHHHHHHHhcC-CCHH----HHHHHhHHHHHHHHHHHHhcC
Confidence            54332   2222110        01222      3458999999999853 1111    112335777888899999874


Q ss_pred             hhcCCCcchhhhhhhhhHHHHHHHHHHhhcCCccccccccccCCCcHHHHHHHHHHHhcccChhhHHhhHHHHHHHHHHH
Q 002190          798 VLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFL  877 (955)
Q Consensus       798 ~~~~~~~~~~~~e~~k~l~~~l~il~~~l~~~~vnfg~~~~y~d~~~~~~l~~~l~l~l~ip~~dl~~yPkl~~~~f~ll  877 (955)
                         .|..+  +.+++..+..+++-+.+.+.              +.++.+++.+|++|+.|..+||.+||+||..||+|+
T Consensus       794 ---~p~~r--~~evL~l~s~iv~k~~~~~~--------------~~~~~il~~vf~~Tl~mi~~~f~~~Pe~r~~ff~ll  854 (1073)
T 3gjx_A          794 ---VPAAR--EPEVLSTMAIIVNKLGGHIT--------------AEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLL  854 (1073)
T ss_dssp             ---CGGGC--CTHHHHHHHHHHHHHGGGTG--------------GGHHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHH
T ss_pred             ---Ccccc--cHHHHHHHHHHHHHHHhhcc--------------hhHHHHHHHHHHHHHHHHhCCcccCcHHHHHHHHHH
Confidence               55555  66777754444444444333              478999999999999999999999999999999999


Q ss_pred             HHHHhhhHHhhhcCChHHHHHHHHHHHHhhccccHHHHhhhhcccccccccccc
Q 002190          878 EVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQVYAQKWHQVICLCP  931 (955)
Q Consensus       878 ~~~~~~~~~~l~~l~~~~f~~~~~sl~~gl~~~~~~i~~~~l~~~~~~l~~l~~  931 (955)
                      ..+++.||..+.++|++.|+.+++|+.||+||.+++|++.|+.++.++++|+..
T Consensus       855 ~~~~~~~f~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~  908 (1073)
T 3gjx_A          855 QAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQ  908 (1073)
T ss_dssp             HHHHHHCGGGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhHHHHcCCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999999875

PyMOL of 3gjx

>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B	Back alignment and structure

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B	Back alignment and structure

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B	Back alignment and structure

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*	Back alignment and structure

>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}	Back alignment and structure

>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}	Back alignment and structure

>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19	Back alignment and structure

>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A	Back alignment and structure

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*	Back alignment and structure

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A	Back alignment and structure

>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A	Back alignment and structure

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A	Back alignment and structure

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		955
d1wa5c_		959	a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Sacc	9e-07
d1qbkb_		888	a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapi	6e-05
d2bpta1		861	a.118.1.1 (A:1-861) Importin beta {Baker's yeast (	0.003

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 959	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (120), Expect = 9e-07
 Identities = 36/324 (11%), Positives = 86/324 (26%), Gaps = 24/324 (7%)

Query: 5   AQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLL 64
           + LE + + L  S  +     +E  L+       +      ++ +   P +  LA +   
Sbjct: 2   SDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFF 61

Query: 65  KQV---------TEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGW 115
           K             H L       I+  ++  +      LQ      + + +  +    +
Sbjct: 62  KNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQV----QIGEAISSIADSDF 117

Query: 116 FDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRD 175
              DR+  L+ +  + LS          L + + +                 ++      
Sbjct: 118 P--DRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFT 175

Query: 176 QSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPS 235
                + +     +   +++ AS L  L   L +    +            E        
Sbjct: 176 APFLNLLKTVDEQITANENNKAS-LNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMG 234

Query: 236 AWRPVLEDPSTLQIFFD--YYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHL 293
            +   L   + L    D   +A     +     E +    +    +F         +   
Sbjct: 235 IFHKYLSYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGP------MINEF 288

Query: 294 MTGTKEILQTGQGLADHDNYHEYC 317
           +  T  +L +      +D      
Sbjct: 289 IQITWNLLTSISNQPKYDILVSKS 312

PyMOL of d1wa5c_

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Length = 888	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 861	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		955
d1w9ca_		321	Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [Tax	99.67
d1wa5c_		959	Exportin Cse1p {Baker's yeast (Saccharomyces cerev	99.56
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	99.16
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	98.89
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	98.86
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	97.51

>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Exportin HEAT-like repeat
domain: Exportin-1 (Xpo1, Crm1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.8e-17  Score=174.77  Aligned_cols=156  Identities=14%  Similarity=0.219  Sum_probs=126.1

Q ss_pred             cchHHHHHHHHHHHhcccceeeecCCCcchhHHHHHHHHHHHHHHHhhhcCCCcchhhhhhhhhHHHHHHHHHHhhcCCc
Q 002190          751 EVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNY  830 (955)
Q Consensus       751 ~v~~~iLkl~~~~~~n~~~ri~~~~~s~~~~~lf~~~~~il~~y~~~~~~~~~~~~~~~e~~k~l~~~l~il~~~l~~~~  830 (955)
                      .+...|||++..++++. ....    .....++-+.+..++.+|.++   .|..+  ++|+++.    +..+.+.+++.+
T Consensus        44 ~iKkeiLkLi~t~i~~~-~d~~----~v~~~~i~pl~~~vL~DY~~~---~p~~R--~~eVL~l----~~~ii~kl~~~~  109 (321)
T d1w9ca_          44 TVKRETLKLISGWVSRS-NDPQ----MVAENFVPPLLDAVLIDYQRN---VPAAR--EPEVLST----MAIIVNKLGGHI  109 (321)
T ss_dssp             HHHHHHHHHHHHHHTTC-SCHH----HHHHHTHHHHHHHHHHHHHTS---CGGGC--CTHHHHH----HHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHHHhcC-CCHH----HHHHHHHHHHHHHHHHHHHhC---chhhc--cHhHHHH----HHHHHHHHHHhh
Confidence            34458999999999842 1111    111235677778899999874   55556  6777774    444445555433


Q ss_pred             cccccccccCCCcHHHHHHHHHHHhcccChhhHHhhHHHHHHHHHHHHHHHhhhHHhhhcCChHHHHHHHHHHHHhhccc
Q 002190          831 VNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGL  910 (955)
Q Consensus       831 vnfg~~~~y~d~~~~~~l~~~l~l~l~ip~~dl~~yPkl~~~~f~ll~~~~~~~~~~l~~l~~~~f~~~~~sl~~gl~~~  910 (955)
                                .+.++.+++.+|++|+.|+.+|+.+||+||..||+||+++++.||+.++++|+++|+.+++|++||++|.
T Consensus       110 ----------~~~v~~I~~~VFe~Tl~MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~~vidsi~wa~kH~  179 (321)
T d1w9ca_         110 ----------TAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHT  179 (321)
T ss_dssp             ----------GGGHHHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCS
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHhccchhChHHHHHHHHHHHHHHHHCHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence                      2468899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHhhhhccccccccccc
Q 002190          911 DTNISSQVYAQKWHQVICLC  930 (955)
Q Consensus       911 ~~~i~~~~l~~~~~~l~~l~  930 (955)
                      +++|++.||+++.+++.++.
T Consensus       180 ~~~V~~~gL~~l~~ll~n~~  199 (321)
T d1w9ca_         180 MRNVADTGLQILFTLLQNVA  199 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHh
Confidence            99999999999878777654

PyMOL of d1w9ca_

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure