Citrus Sinensis ID: 002208
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 953 | 2.2.26 [Sep-21-2011] | |||||||
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.996 | 0.997 | 0.914 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.992 | 0.994 | 0.896 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | yes | no | 0.992 | 0.997 | 0.891 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.992 | 0.996 | 0.884 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.992 | 0.996 | 0.856 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.994 | 0.998 | 0.871 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.992 | 0.994 | 0.861 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 0.998 | 0.997 | 0.838 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.989 | 0.994 | 0.838 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.991 | 0.995 | 0.830 | 0.0 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1768 bits (4580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/950 (91%), Positives = 928/950 (97%)
Query: 4 KAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKIL 63
KAISLEEIKNETVDLE+IPIEEVFEQLKCTREGLS+ EGA+RLQIFGPNKLEEK ESKIL
Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62
Query: 64 KFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGN 123
KFLGFMWNPLSWVMEAAAVMAIALANG+GKPPDWQDF+GI+CLLVINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 124 AAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQS 183
AAAALMAGLAPKTK+LRDG+WSE+EAAILVPGDIIS+KLGDIIPADARLLEGDPLK+DQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQS 182
Query: 184 ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 243
ALTGESLPVTKNPGDEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 244 LTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 303
LTAIGNFCICSIA+GMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVM 363
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD+NL+EVFAKGV+K++V+
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVL 362
Query: 364 LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWH 423
LLAARASR ENQDAIDA +VGMLADPKEARAGIREVHF PFNPVDKRTALTYID++ +WH
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 424 RASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQF 483
RASKGAPEQIL LCNAKED+++KVH+++DKYAERGLRSLAVAR+ VPE++KESPGG W+F
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 543
VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 544 QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603
QDKD++IA+LP+EELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 604 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 663
DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 664 FMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGY 723
FMFIALIWK+DFS FMVLIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIFATGVVLGGY
Sbjct: 663 FMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGY 722
Query: 724 LALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSY 783
ALMTV+FFWAMH+TDFF DKFGV+++R+S+ EMM+ALYLQVSI+SQALIFVTRSRSWS+
Sbjct: 723 QALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSF 782
Query: 784 LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843
LERPG+LLV AF+IAQLVATLIAVYANW FAR+KG GWGWAGVIWLYSI+FY+PLD+MKF
Sbjct: 783 LERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKF 842
Query: 844 AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSS 903
AIRYILSGKAW NLL+NKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE NLF EK+S
Sbjct: 843 AIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNS 902
Query: 904 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
YRELSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 903 YRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1728 bits (4475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/948 (89%), Positives = 910/948 (95%), Gaps = 2/948 (0%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLG 67
LEEIKNE VDLE IPIEEVFEQLKCTREGLSS EG R+++FGPNKLEEKKESKILKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AA+MAIALANG GKPPDW+DFVGI+ LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
LMA LAPKTK+LRDG+W E+EAAILVPGDIISIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+++EIIVM+PIQHR YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+EVF KGV+KDHV+LLAA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
RASRTENQDAIDAA+VGMLADPKEARAGIREVHF PFNPVDKRTALTYID+DG+WHRASK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQIL LCN KED+K+KVHA+IDKYAERGLRSLAVARQEVPE++KES GGPWQFVGLL
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607
AS+ ALPV+ELIEKADGFAGVFPEHKYEIVK+LQE+KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
AVADATDAAR ASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIV GF+ I
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLI 663
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIWK+DFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATG+VLG YLALM
Sbjct: 664 ALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALM 723
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERP 787
TVIFFWAMH+TDFF DKFGVR+IR+SEHEMM+ALYLQVSIVSQALIFVTRSRSWS++ERP
Sbjct: 724 TVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERP 783
Query: 788 GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847
GLLLVTAF++AQLVAT +AVYANWGFARIKG+GWGWAGVIWLYSIVFY PLD+ KF IR+
Sbjct: 784 GLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRF 843
Query: 848 ILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE--TNNLFPEKSSYR 905
+LSG+AW NLLENK AFTTKKDYG+EEREAQWA AQRTLHGLQPPE +N LF +KSSYR
Sbjct: 844 VLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYR 903
Query: 906 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTIQQ+YTV
Sbjct: 904 ELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1703 bits (4411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/947 (89%), Positives = 896/947 (94%), Gaps = 1/947 (0%)
Query: 7 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFL 66
SLE+IKNETVDLE+IPIEEVF+QLKC+REGL++ EG +R+QIFGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 67 GFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAA 126
GFMWNPLSWVME AA+MAIALANG+G+PPDWQDFVGI+CLLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 127 ALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALT 186
ALMAGLAPKTK+LRDGKWSE+EAAILVPGDI+SIKLGDIIPADARLLEGDPLKVDQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 187 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 246
GESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 247 IGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSIA+GM++EIIVMYPIQ RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLA 366
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+EVF KGVEKD V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 367 ARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRAS 426
A ASR ENQDAIDAA+VGMLADPKEARAGIREVHF PFNPVDKRTALTYID G+WHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 427 KGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486
KGAPEQIL L A DL KKV +IIDKYAERGLRSLAVARQ VPE+TKESPG PW+FVGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDK 546
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606
DA++A++PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 607 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 666
IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 667 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAL 726
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLGGY A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 727 MTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLER 786
MTVIFFWA H+TDFF D FGVR+IRD+ HE+M A+YLQVSI+SQALIFVTRSRSWS++ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 787 PGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846
PG LL+ AF+IAQL+ATLIAVYANW FA+I+G+GWGWAGVIWLYSIV Y PLDV KFAIR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 847 YILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRE 906
YILSGKAWLNL ENKTAFT KKDYGKEEREAQWALAQRTLHGLQP E N+FPEK SYRE
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVNIFPEKGSYRE 902
Query: 907 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
LSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T HYTV
Sbjct: 903 LSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1692 bits (4382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 837/946 (88%), Positives = 896/946 (94%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLG 67
LE+IKNETVDLE+IPIEEVF+QLKCTREGL++ EG +R+ IFGPNKLEEKKESKILKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAIALANG+ +PPDWQDFVGI+CLLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
LMAGLAPKTK+LRDGKWSE+EAAILVPGDI+SIKLGDIIPADARLLEGDPLKVDQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+ +EI+VMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+EVF KGVEKD V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
ASR ENQDAIDAA+VGMLADPKEARAGIREVHF PFNPVDKRTALTYIDSDG+WHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQIL L NA+ DL+KKV + IDKYAERGLRSLAVARQ VPE+TKESPGGPW+FVGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSA+LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607
++IA++PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM I
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLGGY A+M
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERP 787
+VIFFWA H+TDFF DKFGVR+IRD+ E+M A+YLQVSI+SQALIFVTRSRSWS++ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 788 GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847
G LL+ AFVIAQLVATLIAVYA+W FA++KG+GWGWAGVIW+YSIV Y P D++KFAIRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 848 ILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYREL 907
ILSGKAW +L +N+TAFTTKKDYG EREAQWA AQRTLHGLQP E N+FPEK SYREL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 908 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
SEIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDIDT HYTV
Sbjct: 904 SEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1679 bits (4349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 810/946 (85%), Positives = 890/946 (94%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLG 67
L+ IKNE+VDL RIP+EEVFE+LKCT++GL++ E ++RL +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AA+MAIALANG G+PPDWQDFVGIVCLL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 LMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
LMAGLAPKTK+LRD +WSE+EA+ILVPGD+ISIKLGDIIPADARLL+GDPLK+DQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G++VE++VMYPIQ R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDKNL+EVFAKGV K+HV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
RASR ENQDAIDAAIVGMLADPKEARAG+REVHFFPFNPVDKRTALTY+DSDG+WHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQIL LCN KED+++KVH +IDK+AERGLRSLAVARQEV E+ K++PGGPWQ VGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607
+S+ ALPV+ELIEKADGFAGVFPEHKYEIV +LQ+R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
AV DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSP PDSWKL++IF+TGVVLGGY ALM
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERP 787
TV+FFW M ++DFF + FGVR + +MMAALYLQVSI+SQALIFVTRSRSWSY E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 788 GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847
GLLL+ AFVIAQLVAT IAVYANW FARI+G GWGWAGVIWLYS + Y+PLD++KF IRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 848 ILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYREL 907
+LSGKAWLNLLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQP E NN+F EK+SY EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 908 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
S+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 904 SQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1672 bits (4330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/949 (87%), Positives = 890/949 (93%), Gaps = 1/949 (0%)
Query: 5 AISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILK 64
A LE+I NE VDLE+IPIEEVF+QLKC+REGLS EG NRLQIFGPNKLEEKKESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 65 FLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNA 124
FLGFMWNPLSWVMEAAA+MAIALANG GKPPDWQDFVGIVCLLVINSTISF+EENNAGNA
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 125 AAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 184
AAALMAGLAPKTK+LRDGKWSE+EA+ILVPGDI+SIKLGDIIPADARLLEGDPLKVDQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 185 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 244
LTGESLP TK PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 245 TAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVG+ +EI+VMYPIQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVML 364
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV+ KGVEKD V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 365 LAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
AARASR ENQDAIDAA+VGMLADPKEARAGIRE+HF PFNPVDKRTALT+IDS+G+WHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 425 ASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFV 484
SKGAPEQIL LCNA+ DL+K+VH+ IDKYAERGLRSLAV+RQ VPE+TKES G PW+FV
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ 544
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPS+SLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 545 DKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 604
KD ++A +PVE+LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 605 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 664
IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 665 MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYL 724
M IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLGGY+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 725 ALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYL 784
A+MTV+FFWA ++TDFFP F VR +R SEHEMM+ALYLQVSIVSQALIFVTRSRSWS+
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 785 ERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFA 844
ERPG L+ AF +AQL+AT IAVY NW FARIKG+GWGWAGVIWLYSIVFY PLD+MKFA
Sbjct: 782 ERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFA 841
Query: 845 IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSY 904
IRYIL+G AW N+++N+TAFTTK++YG EEREAQWA AQRTLHGLQ ET N+ PE+ Y
Sbjct: 842 IRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGY 901
Query: 905 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
RELSEIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T HYTV
Sbjct: 902 RELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-AGHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1662 bits (4304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/948 (86%), Positives = 896/948 (94%), Gaps = 2/948 (0%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLG 67
LEEI+NE VDLE IPIEEVFEQLKCTR+GL+S EGA R++IFG NKLEEKKESK+LKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 68 FMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AA+MAIALANG GKPPDWQDFVGI+ LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
LMA LAPKTK+LRDG+W E+EA+ILVPGDI+SIKLGDI+PADARLLEGDPLK+DQS LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCI SIAVG+++EIIVM+PIQ RKYR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKLSVDKNL+EVFAKGV+K+HV+LLAA
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
RASR ENQDAIDA +VGMLADPKEARAGIREVHF PFNP DKRTALTYID++G+WHRASK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQI+ LCN KED+K+KVH++I+KYAERGLRSLAVARQEVPE++K+SPGGPWQF+GLL
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607
S+ +LPV+ELIEKADGFAGVFPEHKYEIVK+LQE+KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
AV DATDAAR ASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLI 663
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIFATGVVLG YLAL+
Sbjct: 664 ALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALV 723
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERP 787
TV+FFW +H+TDFF +KFGV +IR++E + M+ALYLQVSIVSQALIFVTRSRSWS++ERP
Sbjct: 724 TVVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSRSWSFVERP 783
Query: 788 GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847
G LLVTAF++AQLVATLIAVYANW FARIKG+GWGWAGVIWL+SIVFY PLD+ KF IR+
Sbjct: 784 GFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRF 843
Query: 848 ILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE--TNNLFPEKSSYR 905
+LSG+AW NLL+NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE ++ LF +KSSYR
Sbjct: 844 VLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYR 903
Query: 906 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV
Sbjct: 904 ELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1635 bits (4235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/952 (83%), Positives = 882/952 (92%)
Query: 2 GDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESK 61
G+K S ++IKNE +DLE+IPIEEV QL+CTREGL+S EG RL+IFGPNKLEEKKE+K
Sbjct: 3 GNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENK 62
Query: 62 ILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNA 121
+LKFLGFMWNPLSWVME AA+MAIALANG G+PPDWQDFVGI LL+INSTISFIEENNA
Sbjct: 63 VLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNA 122
Query: 122 GNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181
GNAAAALMAGLAPKTK+LRDGKWSE+EAAILVPGDIISIKLGDI+PAD RLL+GDPLK+D
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKID 182
Query: 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 241
QSALTGESLPVTK+PG EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GHFQ
Sbjct: 183 QSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIA+GML+EI+VMYPIQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDH 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+++EVF K ++KD
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQ 362
Query: 362 VMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGH 421
+++ AARASR ENQDAIDA IVGML DP+EAR GI EVHFFPFNPVDKRTA+TYID++G+
Sbjct: 363 LLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGN 422
Query: 422 WHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481
WHR SKGAPEQI+ LCN +ED K+ H IIDK+A+RGLRSLAV RQ V E+ K SPG PW
Sbjct: 423 WHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPW 482
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
QF+GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPS++L
Sbjct: 483 QFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
LGQDKD SIA+LPV+ELIEKADGFAGVFPEHKYEIVK+LQE KHICGMTGDGVNDAPALK
Sbjct: 543 LGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALK 602
Query: 602 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
+ADIGIAVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 FGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 721
GFM +ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG
Sbjct: 663 MGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 722
Query: 722 GYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSW 781
YLA+MTV+FFWA TDFF KFGVR+I + HE+ AA+YLQVSIVSQALIFVTRSRSW
Sbjct: 723 TYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSW 782
Query: 782 SYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVM 841
SY+ERPG L++AF +AQL+ATLIAVYANW FARI+G+GWGWAGVIWLYSIVFY+PLD++
Sbjct: 783 SYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDIL 842
Query: 842 KFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEK 901
KF IRY LSG+AW N++ENKTAFT+KKDYGK EREAQWA AQRTLHGLQP +T+++F +K
Sbjct: 843 KFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDK 902
Query: 902 SSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
S+YRELSEIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDI+ IQQHYT+
Sbjct: 903 STYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1626 bits (4210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/947 (83%), Positives = 864/947 (91%), Gaps = 4/947 (0%)
Query: 7 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFL 66
S +EIK E VDLERIP+EEVFEQLKC++EGLSS EGA RL+IFG NKLEEK E+K LKFL
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 67 GFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAA 126
GFMWNPLSWVME+AA+MAI LANG GK PDWQDF+GI+ LL+INSTISFIEENNAGNAAA
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 127 ALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALT 186
ALMA LAPKTK+LRDGKW E+EA+ILVPGD+ISIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 187 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 246
GESLP TK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 247 IGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSI +GML+EI++MYPIQHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLA 366
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIEVF K ++ D V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 367 ARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRAS 426
ARASR ENQDAIDA+IVGML DPKEARAGI EVHF PFNPVDKRTA+TYID G WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 427 KGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486
KGAPEQI+ LCN + + K+K H +ID +AERGLRSL VA+Q VPE+TKES G PW+FVGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDK 546
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606
D S+ +P++ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 607 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 666
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 667 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAL 726
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIFATGVVLG Y+AL
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 727 MTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLER 786
TV+FFW H+TDFF FGVR+I+ +E E+MAALYLQVSI+SQALIFVTRSRSWS++ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 787 PGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846
PG LL+ AFVIAQLVATLIAVYANWGFARI G GWGWAG IW+YSI+ Y+PLD++KF IR
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 847 YILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRE 906
Y L+GKAW N++ KTAFTTKKDYGK EREAQWALAQRTLHGL PPE +F + + E
Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--E 901
Query: 907 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1626 bits (4210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/948 (83%), Positives = 872/948 (91%), Gaps = 3/948 (0%)
Query: 6 ISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKF 65
IS +EIK E VDLE+IP++EVF+QLKC+REGLSS EG NRLQIFG NKLEEK E+K LKF
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 66 LGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAA 125
LGFMWNPLSWVMEAAA+MAI LANG G+PPDWQDFVGI CLL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 126 AALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSAL 185
AALMA LAPKTK+LRDG+W E+EAAILVPGD+ISIKLGDI+PADARLLEGDPLK+DQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 186 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 245
TGESLP TK+ GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 246 AIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSI +GML+EII+MYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLL 365
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF+K V+KD+V+LL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 366 AARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRA 425
+ARASR ENQDAID +IV ML DPKEARAGI EVHF PFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 426 SKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVG 485
SKGAPEQI+ LC+ K + K++ H IIDK+AERGLRSL VARQ VPE+ KES G PW+FVG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 486 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQD 545
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 546 KDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 605
KD + +PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKKADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 606 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 665
GIAV DATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 666 FIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLA 725
+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIFATGVVLG Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 726 LMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE 785
L+TV+FFW H+T FF DKFGVR+++ + E++A LYLQVSI+SQALIFVTRSRSWS++E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 786 RPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAI 845
RPGLLL+ AF +AQL+ATLIA YA+W FARIKG GWGW GVIW+YSIV Y+PLD++KF
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 846 RYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYR 905
RY LSGKAW N++EN+TAFTTKKDYG+ EREAQWALAQRTLHGL+PPE+ +F + ++Y
Sbjct: 844 RYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYT 901
Query: 906 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
ELSEIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDID + QHYTV
Sbjct: 902 ELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 953 | ||||||
| 147800127 | 954 | hypothetical protein VITISV_014422 [Viti | 0.998 | 0.997 | 0.935 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.998 | 0.997 | 0.935 | 0.0 | |
| 31580853 | 954 | plasma membrane H+-ATPase [Sesbania rost | 0.995 | 0.994 | 0.942 | 0.0 | |
| 359485026 | 946 | PREDICTED: plasma membrane ATPase 4 isof | 0.990 | 0.997 | 0.930 | 0.0 | |
| 356556196 | 955 | PREDICTED: plasma membrane ATPase 4-like | 0.998 | 0.996 | 0.937 | 0.0 | |
| 255582609 | 952 | H(\+)-transporting atpase plant/fungi pl | 0.996 | 0.997 | 0.931 | 0.0 | |
| 356530298 | 955 | PREDICTED: plasma membrane ATPase 4-like | 0.998 | 0.996 | 0.934 | 0.0 | |
| 356562207 | 953 | PREDICTED: plasma membrane ATPase 4-like | 0.993 | 0.993 | 0.936 | 0.0 | |
| 7105717 | 954 | plasma membrane proton ATPase [Kosteletz | 0.996 | 0.995 | 0.932 | 0.0 | |
| 357479589 | 952 | Plasma membrane H+-ATPase [Medicago trun | 0.994 | 0.995 | 0.916 | 0.0 |
| >gi|147800127|emb|CAN64375.1| hypothetical protein VITISV_014422 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1818 bits (4708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/952 (93%), Positives = 931/952 (97%)
Query: 2 GDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESK 61
GDK+ISLEEIKNETVDLE+IPIEEVFEQLKCT+EGL+S EG RLQIFGPNKLEEKKESK
Sbjct: 3 GDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKESK 62
Query: 62 ILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNA 121
LKFLGFMWNPLSWVMEAAA+MAI LANG+G+PPDWQDFVGIVCLLVINSTISFIEENNA
Sbjct: 63 FLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEENNA 122
Query: 122 GNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181
GNAAAALMAGLAPKTK+LRDG+WSE++AAILVPGDIISIKLGDIIPADARLLEGDPLKVD
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 182
Query: 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 241
QSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ
Sbjct: 183 QSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDH 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD+NL+EVFAKGV+K+H
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEH 362
Query: 362 VMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGH 421
V+LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHF PFNPVDKRTALTYID+DG
Sbjct: 363 VLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGK 422
Query: 422 WHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481
WHRASKGAPEQIL LC KED+KKK H+IIDK+AERGLRSLAV RQEVPE++KES G PW
Sbjct: 423 WHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGSPW 482
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL
Sbjct: 483 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 542
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK
Sbjct: 543 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 602
Query: 602 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 FGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 721
FGF+FIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIFATGVVLG
Sbjct: 663 FGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLG 722
Query: 722 GYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSW 781
GYLALMTVIFFW M +TDFFPDKFGV++IRDS HEMMAALYLQVS+VSQALIFVTRSRSW
Sbjct: 723 GYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSRSW 782
Query: 782 SYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVM 841
S++ERPGLLLVTAF+IAQLVATLIAVYANWGFARIKG+GWGWAGV+W+YS+VFYVPLD +
Sbjct: 783 SFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLDFI 842
Query: 842 KFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEK 901
KF IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+NLF +K
Sbjct: 843 KFFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFXDK 902
Query: 902 SSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
+SYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1817 bits (4707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/952 (93%), Positives = 931/952 (97%)
Query: 2 GDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESK 61
GDK+ISLEEIKNETVDLE+IPIEEVFEQLKCT+EGL+S EG RLQIFGPNKLEEKKESK
Sbjct: 3 GDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKESK 62
Query: 62 ILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNA 121
LKFLGFMWNPLSWVMEAAA+MAI LANG+G+PPDWQDFVGIVCLLVINSTISFIEENNA
Sbjct: 63 FLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEENNA 122
Query: 122 GNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181
GNAAAALMAGLAPKTK+LRDG+WSE++AAILVPGDIISIKLGDIIPADARLLEGDPLKVD
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 182
Query: 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 241
QSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ
Sbjct: 183 QSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDH 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD+NL+EVFAKGV+K+H
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEH 362
Query: 362 VMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGH 421
V+LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHF PFNPVDKRTALTYID+DG
Sbjct: 363 VLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGK 422
Query: 422 WHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481
WHRASKGAPEQIL LC KED+KKK H+IIDK+AERGLRSLAV RQEVPE++KES G PW
Sbjct: 423 WHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGSPW 482
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL
Sbjct: 483 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 542
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK
Sbjct: 543 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 602
Query: 602 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 FGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 721
FGF+FIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIFATGVVLG
Sbjct: 663 FGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLG 722
Query: 722 GYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSW 781
GYLALMTVIFFW M +TDFFPDKFGV++IRDS HEMMAALYLQVS+VSQALIFVTRSRSW
Sbjct: 723 GYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSRSW 782
Query: 782 SYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVM 841
S++ERPGLLLVTAF+IAQLVATLIAVYANWGFARIKG+GWGWAGV+W+YS+VFYVPLD +
Sbjct: 783 SFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLDFI 842
Query: 842 KFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEK 901
KF IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+NLF +K
Sbjct: 843 KFFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFNDK 902
Query: 902 SSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
+SYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|31580853|dbj|BAC77531.1| plasma membrane H+-ATPase [Sesbania rostrata] | Back alignment and taxonomy information |
|---|
Score = 1804 bits (4673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/949 (94%), Positives = 930/949 (97%)
Query: 5 AISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILK 64
+I+LEEIKNETVDLERIP+EEVFEQLKCTREGLSS EGANRLQIFGPNKLEEKKESKILK
Sbjct: 6 SITLEEIKNETVDLERIPVEEVFEQLKCTREGLSSEEGANRLQIFGPNKLEEKKESKILK 65
Query: 65 FLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNA 124
FLGFMWNPLSWVMEAAA+MAIALANG+GKPPDWQDFVGIVCLL+INSTISFIEENNAGNA
Sbjct: 66 FLGFMWNPLSWVMEAAAIMAIALANGDGKPPDWQDFVGIVCLLLINSTISFIEENNAGNA 125
Query: 125 AAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 184
AAALMAGL PKTK+LRDG+WSE+EAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA
Sbjct: 126 AAALMAGLTPKTKVLRDGQWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 185
Query: 185 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 244
LTGESLPV KNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 186 LTGESLPVNKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
Query: 245 TAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVGML EIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 246 TAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVML 364
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVFAKGV+K+HV+L
Sbjct: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDKEHVLL 365
Query: 365 LAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
LAARASRTENQDAIDAA+VG LADPKEARAGIREVHFFPFNPVDKRTALTYIDSDG+WHR
Sbjct: 366 LAARASRTENQDAIDAAVVGTLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGNWHR 425
Query: 425 ASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFV 484
ASKGAPEQI+ LCN ++D KKK+HAIIDK+AERGLRSLAVARQEVPE++K+S GGPWQFV
Sbjct: 426 ASKGAPEQIMTLCNLRDDAKKKIHAIIDKFAERGLRSLAVARQEVPEKSKDSAGGPWQFV 485
Query: 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ 544
GLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ
Sbjct: 486 GLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ 545
Query: 545 DKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 604
DKDASIAALP+EELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD
Sbjct: 546 DKDASIAALPIEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 605
Query: 605 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 664
IGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF
Sbjct: 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 665
Query: 665 MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYL 724
MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIFATGVVLGGYL
Sbjct: 666 MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYL 725
Query: 725 ALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYL 784
ALMTVIFFWAM ET FF DKFGVR++ DS EM+AALYLQVSIVSQALIFVTRSRSWSY+
Sbjct: 726 ALMTVIFFWAMKETTFFSDKFGVRSLHDSPDEMIAALYLQVSIVSQALIFVTRSRSWSYV 785
Query: 785 ERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFA 844
ERPGLLL++AFVIAQL+ATLIAVYANWGFARIKG+GWGWAGVIWLYSIVFYVPLD+MKFA
Sbjct: 786 ERPGLLLMSAFVIAQLIATLIAVYANWGFARIKGIGWGWAGVIWLYSIVFYVPLDIMKFA 845
Query: 845 IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSY 904
IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+ +F EKSSY
Sbjct: 846 IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSGIFNEKSSY 905
Query: 905 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 906 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Sesbania rostrata Species: Sesbania rostrata Genus: Sesbania Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485026|ref|XP_003633201.1| PREDICTED: plasma membrane ATPase 4 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1799 bits (4660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 886/952 (93%), Positives = 926/952 (97%), Gaps = 8/952 (0%)
Query: 2 GDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESK 61
GDK+ISLEEIKNETVDLE+IPIEEVFEQLKCT+EGL+S EG RLQIFGPNKLEEKKESK
Sbjct: 3 GDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKESK 62
Query: 62 ILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNA 121
LKFLGFMWNPLSWVMEAAA+MAI LANG+G+PPDWQDFVGIVCLLVINSTISFIEENNA
Sbjct: 63 FLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEENNA 122
Query: 122 GNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181
GNAAAALMAGLAPKTK+LRDG+WSE++AAILVPGDIISIKLGDIIPADARLLEGDPLKVD
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 182
Query: 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 241
QSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ
Sbjct: 183 QSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDH 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD+NL+EVFAKGV+K+H
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEH 362
Query: 362 VMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGH 421
V+LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHF PFNPVDKRTALTYID+DG
Sbjct: 363 VLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGK 422
Query: 422 WHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481
WHRASKGAPEQ ED+KKK H+IIDK+AERGLRSLAV RQEVPE++KES G PW
Sbjct: 423 WHRASKGAPEQ--------EDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGSPW 474
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL
Sbjct: 475 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 534
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK
Sbjct: 535 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 594
Query: 602 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 595 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 654
Query: 662 FGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 721
FGF+FIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIFATGVVLG
Sbjct: 655 FGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLG 714
Query: 722 GYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSW 781
GYLALMTVIFFW M +TDFFPDKFGV++IRDS HEMMAALYLQVS+VSQALIFVTRSRSW
Sbjct: 715 GYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSRSW 774
Query: 782 SYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVM 841
S++ERPGLLLVTAF+IAQLVATLIAVYANWGFARIKG+GWGWAGV+W+YS+VFYVPLD +
Sbjct: 775 SFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLDFI 834
Query: 842 KFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEK 901
KF IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+NLF +K
Sbjct: 835 KFFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFNDK 894
Query: 902 SSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
+SYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 895 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 946
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556196|ref|XP_003546412.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1792 bits (4642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 893/953 (93%), Positives = 928/953 (97%), Gaps = 1/953 (0%)
Query: 2 GDKA-ISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKES 60
GDK I+LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEG NRLQIFGPNKLEEKKES
Sbjct: 3 GDKGTITLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGENRLQIFGPNKLEEKKES 62
Query: 61 KILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAA+MAIALANGEGKPPDWQDFVGIVCLL+INSTISFIEENN
Sbjct: 63 KFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLLINSTISFIEENN 122
Query: 121 AGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKV 180
AGNAAAALMAGLAPKTK+LRDGKWSE+EAAILVPGDIISIKLGDIIPADARLLEGDPL V
Sbjct: 123 AGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLMV 182
Query: 181 DQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
DQ+ALTGESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF
Sbjct: 183 DQAALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 242
Query: 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGML EIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 243 QKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 302
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKD 360
MAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVFAKGV+KD
Sbjct: 303 MAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDKD 362
Query: 361 HVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDG 420
HV+LLAARA+RTENQDAIDAAIVGMLADPKEARAGIREVHF PFNPVDKRTALTYID++G
Sbjct: 363 HVILLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDANG 422
Query: 421 HWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGP 480
+WHRASKGAPEQI+ALCN ++D KKKVHAIIDK+AERGLRSLAVARQEVPE+TKES G P
Sbjct: 423 NWHRASKGAPEQIMALCNLRDDAKKKVHAIIDKFAERGLRSLAVARQEVPEKTKESAGAP 482
Query: 481 WQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS 540
WQFVGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA+
Sbjct: 483 WQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAT 542
Query: 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 600
LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL
Sbjct: 543 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 602
Query: 601 KKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 603 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 662
Query: 661 VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVL 720
VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIFATGVVL
Sbjct: 663 VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVL 722
Query: 721 GGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRS 780
GGYLALMTVIFFWAM ET FFPDKFGVR I D+ EM AALYLQVSIVSQALIFVTRSRS
Sbjct: 723 GGYLALMTVIFFWAMKETTFFPDKFGVRPIHDNPDEMTAALYLQVSIVSQALIFVTRSRS 782
Query: 781 WSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDV 840
WS++ERPGLLL+TAF+IAQL+AT+IAVYANWGFARI+G+GWGWAGVIWLYSIVFY PLD+
Sbjct: 783 WSFIERPGLLLMTAFIIAQLIATVIAVYANWGFARIQGIGWGWAGVIWLYSIVFYFPLDL 842
Query: 841 MKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPE 900
MKFAIRYILSGKAW NLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+N+F E
Sbjct: 843 MKFAIRYILSGKAWNNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNIFNE 902
Query: 901 KSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
KSSYREL+EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 KSSYRELTEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 955
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582609|ref|XP_002532086.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] gi|223528246|gb|EEF30300.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1792 bits (4641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/950 (93%), Positives = 931/950 (98%)
Query: 4 KAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKIL 63
K+ISLEEIKNETVDLERIPI+EVFEQLKCTREGLSS EG NRLQIFGPNKLEEKKESKIL
Sbjct: 3 KSISLEEIKNETVDLERIPIDEVFEQLKCTREGLSSDEGTNRLQIFGPNKLEEKKESKIL 62
Query: 64 KFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGN 123
KFLGFMWNPLSWVMEAAA+MAIALANG+G+PPDWQDF+GI+CLLVINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAIMAIALANGDGEPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 124 AAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQS 183
AAAALMAGLAPKTK+LRDGKW+E+EAAILVPGDIISIKLGDI+PADARLLEGDPLK+DQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGKWTEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQS 182
Query: 184 ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 243
ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 244 LTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 303
LTAIGNFCICSIA+GMLVEIIVMYPIQHRKYRDGI+NLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGINNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVM 363
GSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS+DK LIEVFAKGVEKDHV+
Sbjct: 303 GSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSIDKALIEVFAKGVEKDHVI 362
Query: 364 LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWH 423
LLAARASR ENQDAIDAA+VGMLADPKEARAGIREVHF PFNPVDKRTALTYID+DG+WH
Sbjct: 363 LLAARASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWH 422
Query: 424 RASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQF 483
RASKGAPEQIL+LCN++EDLK+KVH++IDK+AERGLRSLAVARQ+VPE+ K+SPG PW+F
Sbjct: 423 RASKGAPEQILSLCNSREDLKRKVHSVIDKFAERGLRSLAVARQQVPEKNKDSPGSPWEF 482
Query: 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 543
VGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA+LLG
Sbjct: 483 VGLLNLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSATLLG 542
Query: 544 QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603
QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 604 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 663
DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 664 FMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGY 723
FM IALIW++DFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATG+VLGGY
Sbjct: 663 FMLIALIWQYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGY 722
Query: 724 LALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSY 783
LALMTVIFFWAMH+TDFF DKFGVR+IR S+ E+M ALYLQVSIVSQALIFVTRSRSWSY
Sbjct: 723 LALMTVIFFWAMHDTDFFSDKFGVRSIRRSDPELMGALYLQVSIVSQALIFVTRSRSWSY 782
Query: 784 LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843
ERPGLLLVTAF+IAQLVATLIAVYANWGFA IKG+GWGWAGVIWLYSIVFY+PLD++KF
Sbjct: 783 FERPGLLLVTAFIIAQLVATLIAVYANWGFAHIKGIGWGWAGVIWLYSIVFYIPLDLLKF 842
Query: 844 AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSS 903
AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET ++F EKSS
Sbjct: 843 AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETASIFNEKSS 902
Query: 904 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 952
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356530298|ref|XP_003533719.1| PREDICTED: plasma membrane ATPase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1788 bits (4630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/953 (93%), Positives = 928/953 (97%), Gaps = 1/953 (0%)
Query: 2 GDKA-ISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKES 60
GDK I+LEEIKNETVDLERIPI+EVFEQLKCTREGLSSTEG NRLQIFGPNKLEEKKES
Sbjct: 3 GDKGTITLEEIKNETVDLERIPIDEVFEQLKCTREGLSSTEGENRLQIFGPNKLEEKKES 62
Query: 61 KILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAA+MAIALANGEGKPPDWQDFVGIVCLL+INSTISFIEENN
Sbjct: 63 KFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLLINSTISFIEENN 122
Query: 121 AGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKV 180
AGNAAAALMAGLAPKTK+LRDGKWSE+EAAILVPGDIISIKLGDIIPADARLLEGDPL V
Sbjct: 123 AGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLMV 182
Query: 181 DQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
DQ+ALTGESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF
Sbjct: 183 DQAALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 242
Query: 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIA+GML EIIVMYPIQHRKYR+GIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 243 QKVLTAIGNFCICSIAIGMLAEIIVMYPIQHRKYREGIDNLLVLLIGGIPIAMPTVLSVT 302
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKD 360
MAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVFAKGV+KD
Sbjct: 303 MAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDKD 362
Query: 361 HVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDG 420
HV+LLAARA+RTENQDAIDAAIVGMLADPKEARAGIREVHF PFNPVDKRTALTYID++G
Sbjct: 363 HVILLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDANG 422
Query: 421 HWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGP 480
+WHRASKGAPEQI++LCN ++D KKKVHAIIDK+AERGLRSLAVARQEVPE+TKES G P
Sbjct: 423 NWHRASKGAPEQIMSLCNLRDDAKKKVHAIIDKFAERGLRSLAVARQEVPEKTKESAGAP 482
Query: 481 WQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS 540
WQFVGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS
Sbjct: 483 WQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS 542
Query: 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 600
LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL
Sbjct: 543 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 602
Query: 601 KKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 603 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 662
Query: 661 VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVL 720
VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIFATGVVL
Sbjct: 663 VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVL 722
Query: 721 GGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRS 780
GGYLALMTVIFFWA+ ET FFPDKFGVR I D+ EM AALYLQVSIVSQALIFVTRSRS
Sbjct: 723 GGYLALMTVIFFWAIKETTFFPDKFGVRPIHDNPDEMTAALYLQVSIVSQALIFVTRSRS 782
Query: 781 WSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDV 840
WS++ERPGLLLVTAFVIAQL+AT+IAVYANWGFARI+G+GWGWAGVIWLYSIVFY PLD+
Sbjct: 783 WSFIERPGLLLVTAFVIAQLIATVIAVYANWGFARIQGIGWGWAGVIWLYSIVFYFPLDI 842
Query: 841 MKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPE 900
MKFAIRYILSGKAW NLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+N+F E
Sbjct: 843 MKFAIRYILSGKAWNNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNIFNE 902
Query: 901 KSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
KSSYREL+EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 KSSYRELTEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 955
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562207|ref|XP_003549363.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1787 bits (4628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 889/949 (93%), Positives = 925/949 (97%), Gaps = 2/949 (0%)
Query: 5 AISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILK 64
AISLEEIKNETVDLERIPIEEVF+QLKCTREGLSS EGANRLQIFGPNKLEEKKESK LK
Sbjct: 7 AISLEEIKNETVDLERIPIEEVFQQLKCTREGLSSDEGANRLQIFGPNKLEEKKESKFLK 66
Query: 65 FLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNA 124
FLGFMWNPLSWVMEAAA+MAIALANG GKPPDWQDFVGIVCLLVINSTISFIEENNAGNA
Sbjct: 67 FLGFMWNPLSWVMEAAAIMAIALANGNGKPPDWQDFVGIVCLLVINSTISFIEENNAGNA 126
Query: 125 AAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 184
AAALMAGLAPKTK+LRDGKW+EEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA
Sbjct: 127 AAALMAGLAPKTKVLRDGKWTEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 186
Query: 185 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 244
LTGESLPVT+ PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 187 LTGESLPVTRGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 246
Query: 245 TAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVGML EIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 247 TAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 306
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVML 364
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHV+L
Sbjct: 307 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVIL 366
Query: 365 LAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
LAARASRTENQDAIDAAIVGMLADPKEARAG+REVHF PFNPVDKRTALTYID+DG+WHR
Sbjct: 367 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDADGNWHR 426
Query: 425 ASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFV 484
ASKGAPEQI+ LCN ++D KKKVHAIIDK+AERGLRSLAVARQEVPE+TKES G PWQFV
Sbjct: 427 ASKGAPEQIMTLCNLRDDAKKKVHAIIDKFAERGLRSLAVARQEVPEKTKESAGAPWQFV 486
Query: 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ 544
GLL LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ
Sbjct: 487 GLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ 546
Query: 545 DKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 604
DKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD
Sbjct: 547 DKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 606
Query: 605 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 664
IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF
Sbjct: 607 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 666
Query: 665 MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYL 724
MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIFATG+VLG YL
Sbjct: 667 MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLQEIFATGIVLGSYL 726
Query: 725 ALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYL 784
ALMTVIFFWAM ETDFFPDKFGVR + + EMM+ALYLQVSIVSQALIFVTRSRSWS++
Sbjct: 727 ALMTVIFFWAMKETDFFPDKFGVRHL--THDEMMSALYLQVSIVSQALIFVTRSRSWSFI 784
Query: 785 ERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFA 844
ERPGLLLV AFVIAQL+AT+IAVYA+WGFA++KG+GWGWAGVIWLYS+VFY+PLDVMKFA
Sbjct: 785 ERPGLLLVFAFVIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSVVFYIPLDVMKFA 844
Query: 845 IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSY 904
RYILSGKAW+N+LENKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPET+ +F EK+SY
Sbjct: 845 TRYILSGKAWVNMLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPETSGIFNEKNSY 904
Query: 905 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 905 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7105717|gb|AAB84202.2| plasma membrane proton ATPase [Kosteletzkya virginica] | Back alignment and taxonomy information |
|---|
Score = 1783 bits (4618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 886/950 (93%), Positives = 924/950 (97%)
Query: 4 KAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKIL 63
K ISLEEI+NETVDLE+IPIEEVFEQLKCT+EGLSS EGANRLQIFGPNKLEEKKESKIL
Sbjct: 5 KGISLEEIRNETVDLEKIPIEEVFEQLKCTKEGLSSEEGANRLQIFGPNKLEEKKESKIL 64
Query: 64 KFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGN 123
KFLGFMWNPLSWVMEAAA+MAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGN
Sbjct: 65 KFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGN 124
Query: 124 AAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQS 183
AAAALMAGLAPKTK+LRDGKWSE+EAAILVPGDIIS+KLGDIIPADARLLEGDPLKVDQS
Sbjct: 125 AAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKVDQS 184
Query: 184 ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 243
ALTGESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV
Sbjct: 185 ALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 244
Query: 244 LTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 303
LTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 245 LTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVM 363
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF K +KDHV+
Sbjct: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFVKDGDKDHVL 364
Query: 364 LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWH 423
LLAARASR ENQDAIDAAIVG LADP+EARA I EVHF PFNPVDKRTA+TYIDS+G+WH
Sbjct: 365 LLAARASRVENQDAIDAAIVGTLADPREARASITEVHFLPFNPVDKRTAITYIDSNGNWH 424
Query: 424 RASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQF 483
RASKGAPEQILALCNAKED KKKVH+IIDK+AERGLRSLAV+RQ+VPE++KES G PWQF
Sbjct: 425 RASKGAPEQILALCNAKEDFKKKVHSIIDKFAERGLRSLAVSRQQVPEKSKESAGAPWQF 484
Query: 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 543
VGLL LFDPPRHDSAETIR+ L+LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG
Sbjct: 485 VGLLSLFDPPRHDSAETIRQTLHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 544
Query: 544 QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603
QDKDA+IAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA
Sbjct: 545 QDKDANIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 604
Query: 604 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 663
DIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG
Sbjct: 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 664
Query: 664 FMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGY 723
F+FIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATG+VLGGY
Sbjct: 665 FLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGY 724
Query: 724 LALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSY 783
LALMTVIFFWAMH+TDFF +KF VR++R SE+EMM ALYLQVSIVSQALIFVTRSRSWSY
Sbjct: 725 LALMTVIFFWAMHDTDFFSEKFSVRSLRGSENEMMGALYLQVSIVSQALIFVTRSRSWSY 784
Query: 784 LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843
ERPGLLL++AF+IAQLVATLIAVYANWGFARIKG+GWGWAGVIWLYSIVFYVPLD +KF
Sbjct: 785 AERPGLLLLSAFIIAQLVATLIAVYANWGFARIKGIGWGWAGVIWLYSIVFYVPLDFIKF 844
Query: 844 AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSS 903
AIRYILSGKAWL L ENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPET+NLF EK+S
Sbjct: 845 AIRYILSGKAWLTLFENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFHEKNS 904
Query: 904 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 905 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Kosteletzkya virginica Species: Kosteletzkya virginica Genus: Kosteletzkya Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357479589|ref|XP_003610080.1| Plasma membrane H+-ATPase [Medicago truncatula] gi|355511135|gb|AES92277.1| Plasma membrane H+-ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1779 bits (4608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/950 (91%), Positives = 918/950 (96%), Gaps = 2/950 (0%)
Query: 4 KAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKIL 63
K+ISLE+IKNETVDLERIP+EEVFEQLKCT+EGLSS EGANRLQIFGPNKLEEKK+SKIL
Sbjct: 5 KSISLEQIKNETVDLERIPVEEVFEQLKCTKEGLSSEEGANRLQIFGPNKLEEKKDSKIL 64
Query: 64 KFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGN 123
KFLGFMWNPLSWVMEAAA+MAI LANG GKPPDWQDFVGI+CLLVINSTISFIEENNAGN
Sbjct: 65 KFLGFMWNPLSWVMEAAALMAIGLANGNGKPPDWQDFVGIICLLVINSTISFIEENNAGN 124
Query: 124 AAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQS 183
AAAALMAGLAPKTK+LRDGKWSE+EAAILVPGDIISIKLGDI+PADARLLEGDPLK+DQS
Sbjct: 125 AAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQS 184
Query: 184 ALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 243
ALTGESLPVT+NPGDEV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV
Sbjct: 185 ALTGESLPVTRNPGDEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 244
Query: 244 LTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 303
LTAIGNFCICSIAVGML EIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 245 LTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVM 363
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF KGV+K+HVM
Sbjct: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFEKGVDKEHVM 364
Query: 364 LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWH 423
LLAARASR ENQDAIDAAIVG LADPKEARAG+RE+HF PFNPVDKRTALTYID +G+WH
Sbjct: 365 LLAARASRVENQDAIDAAIVGTLADPKEARAGVREIHFLPFNPVDKRTALTYIDGNGNWH 424
Query: 424 RASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQF 483
RASKGAPEQI+ LC +ED K+ +HAIIDK+AERGLRSLAVARQEVPE+TKESPG PWQF
Sbjct: 425 RASKGAPEQIMDLCKLREDTKRNIHAIIDKFAERGLRSLAVARQEVPEKTKESPGAPWQF 484
Query: 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 543
VGLL LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA+LLG
Sbjct: 485 VGLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSATLLG 544
Query: 544 QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603
QDKDA+IAALPVEELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALK+A
Sbjct: 545 QDKDANIAALPVEELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKRA 604
Query: 604 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 663
DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG
Sbjct: 605 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 664
Query: 664 FMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGY 723
FMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRV PSPLPDSWKLKEIFATG+VLGGY
Sbjct: 665 FMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVVPSPLPDSWKLKEIFATGIVLGGY 724
Query: 724 LALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSY 783
LALMTVIFFWAM E DFFPDKFGVR + + EMM+ALYLQVSIVSQALIFVTRSR WS+
Sbjct: 725 LALMTVIFFWAMKENDFFPDKFGVRKL--NHDEMMSALYLQVSIVSQALIFVTRSRGWSF 782
Query: 784 LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843
LERPG LLV AF IAQL+AT+IAVYANWGFA+++G+GWGWAGVIWLYSIVFY+PLDVMKF
Sbjct: 783 LERPGALLVIAFFIAQLIATIIAVYANWGFAKVQGIGWGWAGVIWLYSIVFYIPLDVMKF 842
Query: 844 AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSS 903
AIRYILSGKAW NLL+NKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPE++ +F EKSS
Sbjct: 843 AIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPESSGIFNEKSS 902
Query: 904 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 952
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 953 | ||||||
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.992 | 0.996 | 0.824 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.994 | 0.998 | 0.812 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.992 | 0.996 | 0.799 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.998 | 0.997 | 0.782 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.991 | 0.995 | 0.777 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.989 | 0.994 | 0.785 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.998 | 0.995 | 0.763 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.991 | 0.984 | 0.754 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.988 | 0.980 | 0.680 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.973 | 0.979 | 0.673 | 0.0 |
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4051 (1431.1 bits), Expect = 0., P = 0.
Identities = 780/946 (82%), Positives = 838/946 (88%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXG 67
LE+IKNETVDLE+IPIEEVF+QLKCTREGL++ EG +R+ IFGPN G
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NG+ +PPDWQDFVGI+CLLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
PKTK+LRDGKWSE+EAAILVPGDI+SIKLGDIIPADARLLEGDPLKVDQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+ +EI+VMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+EVF KGVEKD V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
ASR ENQDAIDAA+VGMLADPKEARAGIREVHF PFNPVDKRTALTYIDSDG+WHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQIL L NA+ DL+KKV + IDKYAERGLRSLAVARQ VPE+TKESPGGPW+FVGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSA+LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXXXX 607
++IA++PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM I
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLGGY A+M
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERP 787
+VIFFWA H+TDFF DKFGVR+IRD+ E+M A+YLQVSI+SQALIFVTRSRSWS++ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 788 GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847
G LL+ AFVIAQLVATLIAVYA+W FA++KG+GWGWAGVIW+YSIV Y P D++KFAIRY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 848 ILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYREL 907
ILSGKAW +L +N+TAFTTKKDYG EREAQWA AQRTLHGLQP E N+FPEK SYREL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 908 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
SEIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDIDT HYTV
Sbjct: 904 SEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3999 (1412.8 bits), Expect = 0., P = 0.
Identities = 771/949 (81%), Positives = 832/949 (87%)
Query: 5 AISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXX 64
A LE+I NE VDLE+IPIEEVF+QLKC+REGLS EG NRLQIFGPN
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 65 XXGFMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXX 124
GFMWNPLSWVME NG GKPPDWQDFVGIVCLLVINSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 125 XXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 184
PKTK+LRDGKWSE+EA+ILVPGDI+SIKLGDIIPADARLLEGDPLKVDQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 185 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 244
LTGESLP TK PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 245 TAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVG+ +EI+VMYPIQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVML 364
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV+ KGVEKD V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 365 LAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
AARASR ENQDAIDAA+VGMLADPKEARAGIRE+HF PFNPVDKRTALT+IDS+G+WHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 425 ASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFV 484
SKGAPEQIL LCNA+ DL+K+VH+ IDKYAERGLRSLAV+RQ VPE+TKES G PW+FV
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ 544
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPS+SLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 545 DKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXX 604
KD ++A +PVE+LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 605 XXXXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 664
IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 665 MFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYL 724
M IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLGGY+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 725 ALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYL 784
A+MTV+FFWA ++TDFFP F VR +R SEHEMM+ALYLQVSIVSQALIFVTRSRSWS+
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 785 ERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFA 844
ERPG L+ AF +AQL+AT IAVY NW FARIKG+GWGWAGVIWLYSIVFY PLD+MKFA
Sbjct: 782 ERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFA 841
Query: 845 IRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSY 904
IRYIL+G AW N+++N+TAFTTK++YG EEREAQWA AQRTLHGLQ ET N+ PE+ Y
Sbjct: 842 IRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGY 901
Query: 905 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
RELSEIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T HYTV
Sbjct: 902 RELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 949
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3976 (1404.7 bits), Expect = 0., P = 0.
Identities = 756/946 (79%), Positives = 834/946 (88%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXG 67
L+ IKNE+VDL RIP+EEVFE+LKCT++GL++ E ++RL +FGPN G
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NG G+PPDWQDFVGIVCLL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
PKTK+LRD +WSE+EA+ILVPGD+ISIKLGDIIPADARLL+GDPLK+DQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G++VE++VMYPIQ R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDKNL+EVFAKGV K+HV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
RASR ENQDAIDAAIVGMLADPKEARAG+REVHFFPFNPVDKRTALTY+DSDG+WHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQIL LCN KED+++KVH +IDK+AERGLRSLAVARQEV E+ K++PGGPWQ VGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXXXX 607
+S+ ALPV+ELIEKADGFAGVFPEHKYEIV +LQ+R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSP PDSWKL++IF+TGVVLGGY ALM
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERP 787
TV+FFW M ++DFF + FGVR + +MMAALYLQVSI+SQALIFVTRSRSWSY E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 788 GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847
GLLL+ AFVIAQLVAT IAVYANW FARI+G GWGWAGVIWLYS + Y+PLD++KF IRY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 848 ILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYREL 907
+LSGKAWLNLLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQP E NN+F EK+SY EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 908 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
S+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 904 SQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3915 (1383.2 bits), Expect = 0., P = 0.
Identities = 745/952 (78%), Positives = 826/952 (86%)
Query: 2 GDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXX 61
G+K S ++IKNE +DLE+IPIEEV QL+CTREGL+S EG RL+IFGPN
Sbjct: 3 GNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENK 62
Query: 62 XXXXXGFMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXX 121
GFMWNPLSWVME NG G+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 63 VLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNA 122
Query: 122 XXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181
PKTK+LRDGKWSE+EAAILVPGDIISIKLGDI+PAD RLL+GDPLK+D
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKID 182
Query: 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 241
QSALTGESLPVTK+PG EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GHFQ
Sbjct: 183 QSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIA+GML+EI+VMYPIQ R YRDGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDH 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+++EVF K ++KD
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQ 362
Query: 362 VMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGH 421
+++ AARASR ENQDAIDA IVGML DP+EAR GI EVHFFPFNPVDKRTA+TYID++G+
Sbjct: 363 LLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGN 422
Query: 422 WHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481
WHR SKGAPEQI+ LCN +ED K+ H IIDK+A+RGLRSLAV RQ V E+ K SPG PW
Sbjct: 423 WHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPW 482
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
QF+GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPS++L
Sbjct: 483 QFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
LGQDKD SIA+LPV+ELIEKADGFAGVFPEHKYEIVK+LQE KHICGMTGDGVNDAPALK
Sbjct: 543 LGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALK 602
Query: 602 KXXXXXXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
+ IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 FGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 721
GFM +ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG
Sbjct: 663 MGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG 722
Query: 722 GYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSW 781
YLA+MTV+FFWA TDFF KFGVR+I + HE+ AA+YLQVSIVSQALIFVTRSRSW
Sbjct: 723 TYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSW 782
Query: 782 SYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVM 841
SY+ERPG L++AF +AQL+ATLIAVYANW FARI+G+GWGWAGVIWLYSIVFY+PLD++
Sbjct: 783 SYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDIL 842
Query: 842 KFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEK 901
KF IRY LSG+AW N++ENKTAFT+KKDYGK EREAQWA AQRTLHGLQP +T+++F +K
Sbjct: 843 KFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDK 902
Query: 902 SSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
S+YRELSEIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDI+ IQQHYT+
Sbjct: 903 STYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3870 (1367.4 bits), Expect = 0., P = 0.
Identities = 737/948 (77%), Positives = 820/948 (86%)
Query: 6 ISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXX 65
IS +EIK E VDLE+IP++EVF+QLKC+REGLSS EG NRLQIFG N
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 66 XGFMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXX 125
GFMWNPLSWVME NG G+PPDWQDFVGI CLL+INSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 126 XXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSAL 185
PKTK+LRDG+W E+EAAILVPGD+ISIKLGDI+PADARLLEGDPLK+DQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 186 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 245
TGESLP TK+ GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 246 AIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSI +GML+EII+MYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLL 365
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF+K V+KD+V+LL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 366 AARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRA 425
+ARASR ENQDAID +IV ML DPKEARAGI EVHF PFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 426 SKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVG 485
SKGAPEQI+ LC+ K + K++ H IIDK+AERGLRSL VARQ VPE+ KES G PW+FVG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 486 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQD 545
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 546 KDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXX 605
KD + +PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKK
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 606 XXXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 665
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 666 FIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLA 725
+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKLKEIFATGVVLG Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 726 LMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE 785
L+TV+FFW H+T FF DKFGVR+++ + E++A LYLQVSI+SQALIFVTRSRSWS++E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 786 RPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAI 845
RPGLLL+ AF +AQL+ATLIA YA+W FARIKG GWGW GVIW+YSIV Y+PLD++KF
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 846 RYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYR 905
RY LSGKAW N++EN+TAFTTKKDYG+ EREAQWALAQRTLHGL+PPE+ +F + ++Y
Sbjct: 844 RYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYT 901
Query: 906 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
ELSEIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDID + QHYTV
Sbjct: 902 ELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3868 (1366.7 bits), Expect = 0., P = 0.
Identities = 744/947 (78%), Positives = 811/947 (85%)
Query: 7 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXX 66
S +EIK E VDLERIP+EEVFEQLKC++EGLSS EGA RL+IFG N
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 67 GFMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXX 126
GFMWNPLSWVME NG GK PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 127 XXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALT 186
PKTK+LRDGKW E+EA+ILVPGD+ISIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 187 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 246
GESLP TK+PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 247 IGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSI +GML+EI++MYPIQHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLA 366
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIEVF K ++ D V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 367 ARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRAS 426
ARASR ENQDAIDA+IVGML DPKEARAGI EVHF PFNPVDKRTA+TYID G WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 427 KGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486
KGAPEQI+ LCN + + K+K H +ID +AERGLRSL VA+Q VPE+TKES G PW+FVGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDK 546
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXXX 606
D S+ +P++ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 607 XXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 666
IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 667 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAL 726
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIFATGVVLG Y+AL
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 727 MTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLER 786
TV+FFW H+TDFF FGVR+I+ +E E+MAALYLQVSI+SQALIFVTRSRSWS++ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 787 PGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846
PG LL+ AFVIAQLVATLIAVYANWGFARI G GWGWAG IW+YSI+ Y+PLD++KF IR
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 847 YILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRE 906
Y L+GKAW N++ KTAFTTKKDYGK EREAQWALAQRTLHGL PPE +F + + E
Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--E 901
Query: 907 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3817 (1348.7 bits), Expect = 0., P = 0.
Identities = 731/957 (76%), Positives = 816/957 (85%)
Query: 1 MGDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXX 60
MGDK LE + ETVDLE +PIEEVFE L+C+REGL++ RL +FG N
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 XXXXXXGFMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXX 120
GFMWNPLSWVME NG GKPPDWQDFVGI+ LLVINSTISFIEE
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 XXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKV 180
PK K+LRDG+W E++AAILVPGDIISIKLGDI+PADARLLEGDPLK+
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
DQS+LTGESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQHR YR GIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF KGV+ D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 HVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDG 420
V+L+AA+ASR ENQDAIDAAIVGMLADPKEARAG+REVHF PFNP DKRTALTYIDSDG
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 HWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGP 480
HR SKGAPEQIL L + + +++++VHA+IDK+AERGLRSLAVA QEVPE TKES GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 600
LLGQ KD SI ALP+++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKXXXXXXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KK IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVL 720
V GFM +ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIFATGVV
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHE----MMAALYLQVSIVSQALIFVT 776
G Y+A+MTVIFFWA ++TDFFP FGV + + H+ + +A+YLQVSI+SQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 777 RSRSWSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYV 836
RSRSWSY+ERPG+LLV AF++AQLVATLIAVYANW FA I+G+GWGWAGVIWLY+IVFY+
Sbjct: 781 RSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 837 PLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNN 896
PLD++KF IRY LSG+AW ++E + AFT +KD+GKE+RE QWA AQRTLHGLQ P+
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK- 899
Query: 897 LFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
+FPE++ + ELS++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct: 900 MFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3744 (1323.0 bits), Expect = 0., P = 0.
Identities = 717/950 (75%), Positives = 809/950 (85%)
Query: 8 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXG 67
LE + E VDLE +PIEEVFE L+C++EGL++ RL +FG N G
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NG GKPPDWQDFVGI+ LLVINSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 128 XXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTG 187
PK K+LRDG+W E++AAILVPGDIISIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 188 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
ESLPVTK+ GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 248 GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVGML+EI+VMYPIQHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF KGV+ D V+L+AA
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
RASR ENQDAIDAAIVGMLADPK+ARAGI+EVHF PFNP DKRTALTYID++G+ HR SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 428 GAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLL 487
GAPEQIL L + K +++++VHA+IDK+AERGLRSLAVA Q+VPE K+S GGPWQFVGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 547
PLFDPPRHDSAETIRRALNLGV+VKMITGDQLAI KETGRRLGMGTNMYPS++LLGQ+KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXXXX 607
SI ALPV+ELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 608 XXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 667
IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM +
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 671
Query: 668 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALM 727
ALIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIFATGVV G Y+A+M
Sbjct: 672 ALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 731
Query: 728 TVIFFWAMHETDFFPDKFGVRAIRDSEHE----MMAALYLQVSIVSQALIFVTRSRSWSY 783
TVIFFW ++TDFFP FGV + + H+ + +A+YLQVSI+SQALIFVTRSRSWS+
Sbjct: 732 TVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSF 791
Query: 784 LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843
+ERPG+ L+ AF++AQLVATLIAVYANW FA I+G+GWGWAGVIWLY+I+FY+PLD +KF
Sbjct: 792 VERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKF 851
Query: 844 AIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSS 903
IRY LSG+AW ++E + AFT +KD+GKE+RE QWA AQRTLHGLQ P+T +F +++
Sbjct: 852 FIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK-MFTDRTH 910
Query: 904 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
EL+++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct: 911 VSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3327 (1176.2 bits), Expect = 0., P = 0.
Identities = 654/961 (68%), Positives = 765/961 (79%)
Query: 7 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXX 66
+L+ I E++DLE +P+EEVF+ LKCT+EGL+S E RL +FG N
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 67 GFMWNPLSWVMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXX 126
GFMWNPLSWVME +G GKP D+ DFVGIV LL+INSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 127 XXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALT 186
PK K +RDGKW+E +AA LVPGDI+SIKLGDIIPADARLLEGDPLK+DQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 187 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 246
GESLPVTKNPG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQKVLTA
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 247 IGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSIAVGM +EI+V+Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLA 366
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF +G+++D +L+A
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMA 365
Query: 367 ARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRAS 426
ARA+R ENQDAID AIV ML+DPKEARAGI+E+HF PF+P ++RTALTY+D +G HR S
Sbjct: 366 ARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVS 425
Query: 427 KGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486
KGAPE+IL + + K ++K+KVHA IDK+AERGLRSL +A QEVP+ + GGPW FV L
Sbjct: 426 KGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVAL 485
Query: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDK 546
LPLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAIAKETGRRLGMGTNMYPS+SLL +
Sbjct: 486 LPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNN 545
Query: 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXXX 606
++ V+ELIE ADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 546 TEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 607 XXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 666
IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 667 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAL 726
+ + W+FDF PFMVL+IAILNDGTIMTISKDRVKPSP PD WKLKEIFATGVVLG YLA+
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 727 MTVIFFWAMHETDFFPDKFGVR-------AIRDSE---H--EMMA-ALYLQVSIVSQALI 773
MTV+FFWA +ET+FF + F VR ++D + H E MA A+YLQVS +SQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 774 FVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIV 833
FVTRSRSWS++ERPG LLV AF+IAQLVA++I+ ANW FA I+ +GWGW GVIW+++IV
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIV 842
Query: 834 FYVPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE 893
Y+ LD +KF +RY LSGK+W ++E +TA T KK++G+EER A WA +RT HGL+ +
Sbjct: 843 TYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQ 902
Query: 894 TNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI-DTIQQHYT 952
++ E++S EL+ +AE+AKRRAE+AR+REL TLKG VES KLKG D+ D +YT
Sbjct: 903 -KPVY-ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYT 960
Query: 953 V 953
+
Sbjct: 961 I 961
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3263 (1153.7 bits), Expect = 0., P = 0.
Identities = 632/938 (67%), Positives = 745/938 (79%)
Query: 16 VDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSW 75
+DL +P+EEVFE L+ + +GL S + RL+IFGPN GFMWNPLSW
Sbjct: 20 IDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGFMWNPLSW 79
Query: 76 VMEXXXXXXXXXXNGEGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPK 135
VME N + PDW+DF GIVCLL+IN+TISF EE K
Sbjct: 80 VMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAALMARLALK 139
Query: 136 TKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN 195
T++LRDG+W E++A+ILVPGDIISIKLGDIIPADARLLEGDPLK+DQS LTGESLPVTK
Sbjct: 140 TRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGESLPVTKK 199
Query: 196 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 255
G++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IGNFCICSI
Sbjct: 200 KGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIGNFCICSI 259
Query: 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315
AVGM++EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRLSQQGAIT
Sbjct: 260 AVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAIT 319
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQ 375
KRMTAIEEMAGMDVLC DKTGTLTLN L+VDKNLIEVF ++KD ++LLA RASR ENQ
Sbjct: 320 KRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRLENQ 379
Query: 376 DAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILA 435
DAIDAAIV MLADP+EARA IRE+HF PFNPVDKRTA+TYIDSDG W+RA+KGAPEQ+L
Sbjct: 380 DAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQVLN 439
Query: 436 LCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRH 495
LC K ++ ++V+AIID++AE+GLRSLAVA QE+PE++ SPGGPW+F GLLPLFDPPRH
Sbjct: 440 LCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRH 499
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPV 555
DS ETI RAL+LGV VKMITGDQLAIAKETGRRLGMGTNMYPS+SLLG + D A+PV
Sbjct: 500 DSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPV 558
Query: 556 EELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKXXXXXXXXXXXXX 615
+ELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALKK
Sbjct: 559 DELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDA 618
Query: 616 XXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDF 675
IVLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIV GF +ALIW++DF
Sbjct: 619 ARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDF 678
Query: 676 SPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAM 735
PFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IFATG+V+G YLAL+TV+F+W +
Sbjct: 679 PPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVTVLFYWII 738
Query: 736 HETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAF 795
T FF F V++I ++ ++ +A+YLQVSI+SQALIFVTRSR WS+ ERPG LL+ AF
Sbjct: 739 VSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPGTLLIFAF 798
Query: 796 VIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWL 855
++AQL ATLIAVYAN FA+I G+GW WAGVIWLYS++FY+PLDV+KF Y LSG+AW
Sbjct: 799 ILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYALSGEAWN 858
Query: 856 NLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAK 915
+L+ KTAFT KKDYGK++ ++QR+ L + S S IAEQ +
Sbjct: 859 LVLDRKTAFTYKKDYGKDDGSPNVTISQRSR------SAEEL---RGSRSRASWIAEQTR 909
Query: 916 RRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
RRAE+ARL E+H++ H+ESV+KLK +D I+ +TV
Sbjct: 910 RRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8912 | 0.9926 | 0.9978 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8202 | 0.9989 | 0.9958 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3792 | 0.8237 | 0.8289 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.9147 | 0.9968 | 0.9978 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4122 | 0.8163 | 0.9664 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7228 | 0.9737 | 0.9799 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8273 | 0.9916 | 0.9874 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8275 | 0.9989 | 0.9958 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8618 | 0.9926 | 0.9947 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8382 | 0.9989 | 0.9979 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8301 | 0.9916 | 0.9957 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8562 | 0.9926 | 0.9968 | no | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3668 | 0.8342 | 0.8650 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8244 | 0.9989 | 0.9958 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7346 | 0.9884 | 0.9802 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8384 | 0.9895 | 0.9947 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8115 | 0.9916 | 0.9843 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8966 | 0.9926 | 0.9947 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8714 | 0.9947 | 0.9989 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8847 | 0.9926 | 0.9968 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8170 | 0.7345 | 0.9943 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 953 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-114 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-90 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-89 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-77 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-77 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-67 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-65 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-64 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-60 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-57 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-54 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-50 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-42 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-39 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-36 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-35 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-32 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-31 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 7e-31 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-29 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 6e-29 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-28 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-18 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 1e-17 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 5e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-08 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 3e-07 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.001 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 0.001 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.003 | |
| TIGR01487 | 215 | TIGR01487, Pglycolate_arch, phosphoglycolate phosp | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1195 bits (3094), Expect = 0.0
Identities = 455/775 (58%), Positives = 563/775 (72%), Gaps = 23/775 (2%)
Query: 36 GLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPP 95
GL+S E RL +GPN+L EKK S +LKFLGF WNPLSWVMEAAA++AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPG 155
W DFV I+ LL++N+TI FIEEN AGNA AL LAPK ++LRDGKW E A+ LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 156 DIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVV 215
D++ +K+GDI+PAD RL EGD ++VDQ+ALTGESLPVTK GD +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 216 IATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKY 274
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V +L+E++V++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 275 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
R+G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 335 TGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARA 394
TGTLTLNKLS+D+ L F G +KD V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 395 GIREVHFFPFNPVDKRTALTYIDSD-GHWHRASKGAPEQILALCNAKEDLKKKVHAIIDK 453
G + + F PF+PVDKRT T D + G + +KGAP+ IL LC+ K+++++KV +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 454 YAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 513
A RG R+L VAR G W F+GLLPLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 514 ITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHK 573
+TGD LAIAKET RRLG+GTN+Y + LL D + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLP-SGLGEMVEDADGFAEVFPEHK 522
Query: 574 YEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVII 633
YEIV+ LQ+R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAAR A+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMT 693
A+L SR IFQRMK+Y IY ++ TIRIVF F + LI F F P MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 694 ISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDS 753
I+ D VKPS LP W L+E+F VLG YL + T + +T FF DKFG++ +
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHG- 701
Query: 754 EHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVY 808
+ + +YLQVSI A IFVTR+ + + ERPG LL AFVIAQ++AT IAVY
Sbjct: 702 --NLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 549 bits (1417), Expect = 0.0
Identities = 265/912 (29%), Positives = 426/912 (46%), Gaps = 94/912 (10%)
Query: 14 ETVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKL-EEKKESKILKFLGFMWN 71
ET + E+ +L + GLS E RL+ +GPN+L EEKK S + KFL +
Sbjct: 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKD 80
Query: 72 PLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAG 131
P ++ AA+++ + D + I+ ++VIN+ + F++E A A AL
Sbjct: 81 PFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKM 137
Query: 132 LAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLP 191
+PK K+LRDGK+ E A+ LVPGDI+ ++ GD++PAD RLLE L+VD+SALTGESLP
Sbjct: 138 SSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLP 197
Query: 192 VTKNPGDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 237
V K +FSG+T G + +V+ATG T FGK A L+ + +V
Sbjct: 198 VEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEV 257
Query: 238 -GHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNL----LVLLIGGIPIA 292
Q+ L +G F + V LV +++ + + +G+ L L + +P
Sbjct: 258 KTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEG 313
Query: 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV------- 345
+P V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK++V
Sbjct: 314 LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYING 373
Query: 346 -DKNLIEVFAKGVEKDHVMLLAA---------RASRTENQDAIDAAIV------GMLADP 389
K++ + K LLAA + + D + A+V G D
Sbjct: 374 GGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDL 433
Query: 390 KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDL------ 443
+ PF+ KR ++ +G + KGAPE IL C + +L
Sbjct: 434 SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEE 493
Query: 444 -KKKVHAIIDKYAERGLRSLAVARQEVPE----RTKESPGGPWQFVGLLPLFDPPRHDSA 498
+ + + + A GLR LAVA +++ + F+GL + DPPR D
Sbjct: 494 GLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553
Query: 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEEL 558
E I G+ V MITGD + A + G+ + + G + + AL EEL
Sbjct: 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSDEEL 609
Query: 559 ---IEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD-ATD 614
+E+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+ TD
Sbjct: 610 AELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD 669
Query: 615 AARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFD 674
AA+ A+DIVL + + I+ AV+ R ++ +K + +Y +S + V + I ++
Sbjct: 670 AAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVL-TLLIYSLFNLF 728
Query: 675 FSPF---MVLIIAILNDGTI---MTISK---DRVKPSPLPDSWKL--KEIFATGVVLGGY 723
F P +L I +L D + + D +K P L ++IF +++ G
Sbjct: 729 FLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGL 788
Query: 724 LALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSY 783
L+ + I + ++ F + G+ + + + ++ L RSR +
Sbjct: 789 LSAILFILTFLLYLLGFIANTLGLDLFQALLQTTA---FTVLVLIQLLLTLAVRSRGRPF 845
Query: 784 LER-----PGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPL 838
L L L +I + L+ ++ +I + WL +I + L
Sbjct: 846 LSSLLFSNKYLWLALLVII---ILQLLIIFLPPLNLKIFQP-TPLSLFEWLIAIAVALLL 901
Query: 839 DVMKFAIRYILS 850
+ + Y L
Sbjct: 902 LYIVVSELYKLK 913
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-114
Identities = 189/593 (31%), Positives = 285/593 (48%), Gaps = 79/593 (13%)
Query: 103 IVCLLVINSTISFIEENNAGNAAAALMAGLAPKTK--LLRDGKWSEEEAAILVPGDIISI 160
I+ L+++ + ++ A + +L L +LR+G W E A LVPGD++ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 161 KLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNP----------GDEVFSGSTCKQGE 210
K G+ +PAD LL G VD+S LTGES PV K GD VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 211 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPI 269
+ VV TG+ T G+ A +V + Q + NF I + + +L + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 270 QH----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 326 GMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGM 385
+D LCSDKTGTLT NK+++ I G E + L+A + + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYI---DGGKEDNSSSLVACDNNYL-SGDPMEKALLKS 294
Query: 386 LADPKEARAGIRE---VHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKED 442
+A G +E + FPF+ V KR ++ DG KGAPE IL CN
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 443 LKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIR 502
+ A +GLR LA A +E+ +F+GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELE--------DDLEFLGLITFEDPLRPDAKETIE 399
Query: 503 RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562
G+ V MITGD + AK + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 563 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI 622
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALKKAD+GIA+ A+ A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR-IVFGFMFIALIWKFD 674
VL + LS I+ AV R IF +K+ +A++ + I + I +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLLP 536
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 4e-90
Identities = 221/748 (29%), Positives = 354/748 (47%), Gaps = 88/748 (11%)
Query: 22 PIEEVFEQLKCTREGLSSTEGANRLQIFGPNKL-EEKKESKILKFLGFMWNPLSWVMEAA 80
E + +L GL++ E RL FGPN+ EEKK + + NP +++
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAML 78
Query: 81 AVMAIALANGEGKPPDWQDFVGIVCLLVINSTI-SFIEENNAGNAAAALMAGLAPKTKLL 139
++ + E I+ L+V+ S + FI+E+ A AA AL + +L
Sbjct: 79 MGVSYLTDDLEA--------TVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 140 R------DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPV- 192
R +G E LVPGD+I + GDIIPADAR++ L ++QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 193 ----TKNPGDE--------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
K D F G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLL---IGGIPIAMPTVL 297
K + ++ I MLV + V+ I D ++ L L +G P +P ++
Sbjct: 251 DKGVKSVSKLLI----RFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIV 306
Query: 298 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGV 357
S +A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ ++K++ + G
Sbjct: 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGE 363
Query: 358 EKDHVMLLA--ARASRTENQDAIDAAIVGMLAD--PKEARAGIREVHFFPFNPVDKRTAL 413
+ V+ +A +T ++ +D A++ L + ++ + ++V PF+ +R ++
Sbjct: 364 TSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSV 423
Query: 414 TYIDSDGHWHR-ASKGAPEQILALCNAK----------EDLKKKVHAIIDKYAERGLRSL 462
+++ R KGA E++L +C K E K ++ + + +G+R +
Sbjct: 424 V-VENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482
Query: 463 AVARQEVP------ERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 516
AVA + + +T E G L DPP+ + E I G+NVK++TG
Sbjct: 483 AVATKTLKVGEADFTKTDEEQ---LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTG 539
Query: 517 DQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEEL---IEKADGFAGVFPEHK 573
D + + +G+ N + LLG D I L EEL + K FA + P K
Sbjct: 540 DNEIVTARICQEVGIDANDF----LLGAD----IEELSDEELARELRKYHIFARLTPMQK 591
Query: 574 YEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVII 633
I+ L++ H G GDG+NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+
Sbjct: 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLE 651
Query: 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFM------VLIIAILN 687
V+ R F + Y + +T FG +F L+ F PF+ +LI +L
Sbjct: 652 EGVIEGRNTFGNILKY----LKMTASSNFGNVFSVLVAS-AFIPFLPMLSLHLLIQNLLY 706
Query: 688 DGTIMTISKDRVKPSPL--PDSWKLKEI 713
D + +T+ D++ L P W+ K +
Sbjct: 707 DFSQLTLPWDKMDREFLKKPHQWEQKGM 734
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 305 bits (782), Expect = 1e-89
Identities = 220/750 (29%), Positives = 353/750 (47%), Gaps = 113/750 (15%)
Query: 21 IPIEEVFEQLKCTRE-GL-SSTEGANRLQIFGPNKLE-EKKESKILKFLG-FMWNPLSWV 76
+ +EE +L+ + GL SS E ++R G N+ + E+ ES KFL F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 77 MEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKT 136
+ A+AV+++ + N D V I ++I T+ F++E + + AL + P+
Sbjct: 67 LIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 137 KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN- 195
L+R+GK A+ LVPGD++ + +GD +PAD R++E L +D+S LTGE+ PV+K
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 196 -------PGD------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH-FQ 241
GD F G+ + G + +V+ TG +T FG ++ + + Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 242 KVLTAIGN----FCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVL 297
K + +G I V LV Q + + + + L + IP +P ++
Sbjct: 240 KSMDLLGKQLSLVSFGVIGVICLVGWF-----QGKDWLEMFTISVSLAVAAIPEGLPIIV 294
Query: 298 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK---------- 347
+VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N ++V K
Sbjct: 295 TVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM 354
Query: 348 -----------------NLIEVFAKGVEKDHVMLLAA----RASRTENQDAI-----DAA 381
L + V + +L A A D + D A
Sbjct: 355 LNAVSLNQFGEVIVDGDVLHGFYTVAVSR---ILEAGNLCNNAKFRNEADTLLGNPTDVA 411
Query: 382 IVGMLA-----DPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRAS-KGAPEQILA 435
++ +L D +E + EV PF+ K A+ + KGA EQ+L
Sbjct: 412 LIELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLK 468
Query: 436 LCNA-----------KEDLKKKVHAIIDKYAERGLRSLAVAR-QEVPERTKESPGGPWQF 483
C + + + + A GLR +A A E + T F
Sbjct: 469 YCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLT---------F 519
Query: 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 543
+GL+ + DPPR E + + GV + MITGD A RRLGM S S+ G
Sbjct: 520 LGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSG 577
Query: 544 QDKDA-SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 602
+ DA L +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK
Sbjct: 578 EKLDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKL 635
Query: 603 ADIGIAVAD-ATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
ADIG+A+ TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++
Sbjct: 636 ADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AA 694
Query: 662 FGFMFIALIWKFD--FSPFMVLIIAILNDG 689
+ +A + F + +L I IL DG
Sbjct: 695 LSLIALATLMGFPNPLNAMQILWINILMDG 724
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 271 bits (696), Expect = 1e-77
Identities = 212/715 (29%), Positives = 339/715 (47%), Gaps = 85/715 (11%)
Query: 16 VDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMW----N 71
+ +P EE+++ EGL+ E + + G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 72 PLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINST-ISFIEENNAGNAAAALMA 130
P + ++ ++ A + G++ L+V ST ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEARSTKAADALKA 155
Query: 131 GLAPKTKLLR------DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSA 184
++ +LR + W E LVPGDII + GD+IPAD R+L+ L V Q++
Sbjct: 156 MVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQAS 215
Query: 185 LTGESLPVTKNPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
LTGESLPV K F G+ G +AVVIATG +T+FG+ A V
Sbjct: 216 LTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275
Query: 232 DST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLL---IG 287
++ FQ+ ++ + I MLV V+ I D + L L +G
Sbjct: 276 SEQDSEPNAFQQGISRVSWLLI----RFMLVMAPVVLLINGYTKGDWWEAALFALSVAVG 331
Query: 288 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 347
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+LC+DKTGTLT +K+ ++
Sbjct: 332 LTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLEN 391
Query: 348 NLIEVFAKGVEKDHVMLLAARAS--RTENQDAIDAAIVGMLADPKEARAGI--REVHFFP 403
+ ++ G + V+ A S +T ++ +D A++ + + +++ P
Sbjct: 392 H-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIP 448
Query: 404 FNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDK 453
F+ +R ++ ++ H KGA E+IL +C+ + + +++ + D
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDT 508
Query: 454 YAERGLRSLAVARQEVPE------RTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNL 507
+GLR +AVA + +P R ES G + DPP+ +A ++
Sbjct: 509 LNRQGLRVVAVATKYLPAREGDYQRADESD---LILEGYIAFLDPPKETTAPALKALKAS 565
Query: 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEEL---IEKADG 564
GV VK++TGD +A + +G+ L+G D I L +EL E+
Sbjct: 566 GVTVKILTGDSELVAAKVCHEVGLDAGEV----LIGSD----IETLSDDELANLAERTTL 617
Query: 565 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVL 624
FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+V A D AR A+DI+L
Sbjct: 618 FARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIIL 677
Query: 625 TEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFM 679
E L V+ V+ R F M Y + +T FG +F L+ F PF+
Sbjct: 678 LEKSLMVLEEGVIEGRRTFANMLKY----IKMTASSNFGNVFSVLVAS-AFLPFL 727
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 4e-77
Identities = 219/759 (28%), Positives = 354/759 (46%), Gaps = 87/759 (11%)
Query: 22 PIEEVFEQLKCTREGLSSTEGANRLQIFGPNKL-EEKKESKILKFLGFMWNPLSWVMEAA 80
+EE L R+GL+ + A RLQ +GPN++ EK +++ L NP +V+
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 81 A----VMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKT 136
A L G+ D + I+ +++++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 137 KLLR----DGKWSEEEAAI--LVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESL 190
+LR + E + LVPGDI+ + GD+IPAD RL+E L + Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 191 PVTK--------------NPGDEV---------FSGSTCKQGEIEAVVIATGVHTFFGKA 227
PV K DE F G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 228 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLL-- 285
A + T F + + ++ I MLV + V+ I D ++ LL L
Sbjct: 271 AKSIVGTRAQTAFDRGVNSVSWLLI----RFMLVMVPVVLLINGFTKGDWLEALLFALAV 326
Query: 286 -IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344
+G P +P ++S +A G+ ++++ + KR+ AI+ MDVLC+DKTGTLT +++
Sbjct: 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRII 386
Query: 345 VDKNLIEVFAKGVEKDHVMLLAARASRTEN--QDAIDAAIV--GMLADPKEARAGIREVH 400
++ +L G + + V+ LA S ++ ++ +D A+V AG R+V
Sbjct: 387 LEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVD 443
Query: 401 FFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKED----------LKKKVHAI 450
PF+ V +R ++ D+ G KGA E++LA+ D ++++ A+
Sbjct: 444 ELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLAL 503
Query: 451 IDKYAERGLRSLAVARQEVPERTKESP---GGPWQFV--GLLPLFDPPRHDSAETIRRAL 505
+ Y G R L VA +E+P + V G L DPP+ +A I
Sbjct: 504 AEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALR 563
Query: 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEEL---IEKA 562
GV VK++TGD + + R +G+ P LLG + I A+ L +E+
Sbjct: 564 ENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE----IEAMDDAALAREVEER 615
Query: 563 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI 622
FA + P K ++K LQ H G GDG+NDAPAL+ AD+GI+V D A+ ++DI
Sbjct: 616 TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADI 675
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFM--- 679
+L E L V+ V+ R F + Y +++T FG +F L+ F PF+
Sbjct: 676 ILLEKSLMVLEEGVIKGRETFGNIIKY----LNMTASSNFGNVFSVLVAS-AFIPFLPML 730
Query: 680 ---VLIIAILNDGTIMTISKDRVKPSPL--PDSWKLKEI 713
+L+ ++ D + +++ D++ L P W K I
Sbjct: 731 AIHLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNI 769
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 1e-67
Identities = 180/704 (25%), Positives = 306/704 (43%), Gaps = 90/704 (12%)
Query: 37 LSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVM----EAAAVMAIALA---- 88
LSS+ R +++G N+L EK FL +W LS AAV+++ L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEP 118
Query: 89 --NGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALM-AGLAPKTKLLRDGKWS 145
W + V I+ +++ ++ + + L A K ++R G+
Sbjct: 119 GEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 178
Query: 146 EEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVF--SG 203
+ +V GDI+S+ GD++PAD + G L++D+S++TGES P+ K P + F SG
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSG 238
Query: 204 STCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQKVLTAIGNFCICSIAVG 258
+ +G +V A GV++F GK + DST ++ IG F + S +
Sbjct: 239 TVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLL 298
Query: 259 MLVEII--VMYPIQHRKYRDGID-----NLLVLLIGGIPIAMPTVL--SVTMAI--GSHR 307
LV + V I+ D + ++ + + +A+P L +VT+A+ +
Sbjct: 299 FLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKK 358
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI-EVFAKG---------- 356
+ + + + + A E M +CSDKTGTLT N +SV + I E
Sbjct: 359 MMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKH 418
Query: 357 ----------------VEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVH 400
D A S+TE A+ + +L D +E RA + V
Sbjct: 419 VRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGLLLLRDYQEVRAEEKVVK 476
Query: 401 FFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-----------EDLKKKVHA 449
+PFN K ++ S G + KGA E +L C + +D K +
Sbjct: 477 IYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCAD 536
Query: 450 IIDKYAERGLRSLAVARQEVP---ERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALN 506
+I+ A LR++ +A ++ K+ P +G++ + DP R E ++
Sbjct: 537 VIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQR 596
Query: 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELI---EKAD 563
G+ V+M+TGD + AK R G+ T L + +L EE+ K
Sbjct: 597 AGITVRMVTGDNIDTAKAIARNCGILT-----FGGLAMEG-KEFRSLVYEEMDPILPKLR 650
Query: 564 GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARGASDI 622
A P K +V L++ + +TGDG NDAPALK AD+G ++ + T+ A+ ASDI
Sbjct: 651 VLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDI 710
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 661
+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 711 ILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 1e-65
Identities = 153/559 (27%), Positives = 231/559 (41%), Gaps = 85/559 (15%)
Query: 121 AGNAAAALMAGLAPKTKLLRDGKWSEEEAAI--LVPGDIISIKLGDIIPADARLLEGDPL 178
A A AL+ LAPKT + G EEE + + GDI+ ++ G+ IP D ++ G
Sbjct: 198 ARRAIRALLD-LAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS 256
Query: 179 KVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQV 237
VD+S LTGESLPV K PGDEVF+G+ G + V G T + LV ++ +
Sbjct: 257 -VDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315
Query: 238 GHFQKVLTAI-GNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTV 296
Q++ + F + + L + + + L +L+ P A+
Sbjct: 316 APIQRLADRVASYFVPVVLVIAALT-FALWPLFGGGDWETALYRALAVLVIACPCAL--G 372
Query: 297 LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFA 354
L+ AI G R +++G + K A+E +A +D + DKTGTLT K V +V A
Sbjct: 373 LATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVA 428
Query: 355 KGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALT 414
++D ++ LAA + + AIV A R + V+ +
Sbjct: 429 LDGDEDELLALAAALEQHSEH-PLAKAIV--------KAAAERGLP-----DVEDFEEIP 474
Query: 415 YIDSDGHWHRASKGAPEQILALCNAK-----EDLKKKVHAIIDKYAERGLRSLAVARQEV 469
G A + + + NA+ + I+ G + VA
Sbjct: 475 -----GRGVEAEVD--GERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDG- 526
Query: 470 PERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529
+ VG++ L D R D+ E I LG+ V M+TGD A+ + L
Sbjct: 527 ------------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL 574
Query: 530 GMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 589
G I++ A + PE K EIV++LQ M
Sbjct: 575 G----------------------------IDEV--RAELLPEDKAEIVRELQAEGRKVAM 604
Query: 590 TGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK-N 648
GDG+NDAPAL AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N
Sbjct: 605 VGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQN 664
Query: 649 YTIYAVSITIRIVFGFMFI 667
I I +
Sbjct: 665 LFWAFGYNAIAIPLAAGGL 683
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 3e-64
Identities = 145/581 (24%), Positives = 240/581 (41%), Gaps = 84/581 (14%)
Query: 106 LLVINSTISFIEENNAGNAAAAL--MAGLAPKTKLLRDGKWSEEEAAI--LVPGDIISIK 161
LL + +EE G A+ AL + LAP T + G SEEE + L GDI+ ++
Sbjct: 24 LLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVR 83
Query: 162 LGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVH 221
G+ IP D ++ G+ VD+SALTGES+PV K GDEVF+G+ G + V G
Sbjct: 84 PGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGED 142
Query: 222 TFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDN 280
+ + LV ++ + Q++ I ++ + ++ L+ +V + +
Sbjct: 143 STLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---GALGALYR 199
Query: 281 LLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 338
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTGTL
Sbjct: 200 ALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTL 257
Query: 339 TLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIRE 398
T K +V IE + +L A A + + AIV ++
Sbjct: 258 TTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RYAKK 305
Query: 399 VHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQI------LALCNAKEDLKKKVHAIID 452
D + + G A+ E++ + ++
Sbjct: 306 RGLELPKQED----VEEVPGKG--VEATVDGGEEVRIGNPRFLELAIEPISASPDL--LN 357
Query: 453 KYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NV 511
+ +G + VA + +G++ L D R ++ E I G +
Sbjct: 358 EGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404
Query: 512 KMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571
M+TGD + A+ LG ++E+ A + PE
Sbjct: 405 VMLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPE 434
Query: 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 631
K IVK+LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494
Query: 632 IISAVLTSRAIFQRMK-NYTIYAVSITIRIVFGFMFIALIW 671
+ +A+ SR + +K N + I + +W
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 2e-60
Identities = 195/798 (24%), Positives = 341/798 (42%), Gaps = 154/798 (19%)
Query: 8 LEEIKNE-TVDLERIPIEEVFE--QLKCTREGLSSTEGANRLQIFGPNKLEEKKES-KIL 63
L+E+K E +D ++ ++E+ ++ GLS+ A L GPN L + + +
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSK-GLSAARAAEILARDGPNALTPPPTTPEWV 64
Query: 64 KFLGFMWNPLS---WVMEAAAVMAIAL-ANGEGKPPDWQDFVGIVCLLVINST--ISFIE 117
KF ++ S W+ +A + A+ E +P + ++G+V V+ T S+ +
Sbjct: 65 KFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQ 124
Query: 118 ENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDP 177
E + + + + ++RDG+ A +V GD++ +K GD IPAD R++
Sbjct: 125 EAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 178 LKVDQSALTGESLPVTKNPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKA 227
KVD S+LTGES P T++P + F + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 228 AHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGID 279
A L ++ HF ++T + F +G+ I+ + I + + +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVF------LGVSFFILSL--ILGYTWLEAVI 296
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 340 LNKLSV-----DKNLIE----------VFAKGVEK----DHVMLLAARASRTENQDAI-- 378
N+++V D + E F K + L RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 379 -------DAAIVGML-------ADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
DA+ +L E R +V PFN +K + + D R
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 425 ---ASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPE 471
KGAPE+IL C++ E+LK+ + G R L +P+
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 472 RTKESPGG----------PWQ---FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 518
++ P G P FVGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 537 --EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594
Query: 519 LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAA---LPVEELIEKADG----------- 564
AK + +G+ + G + IAA +PV ++ +
Sbjct: 595 PITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646
Query: 565 -----------------FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+
Sbjct: 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGV 706
Query: 608 AVADA-TDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 666
A+ A +D ++ A+D++L + + I++ V R IF +K Y ++ I
Sbjct: 707 AMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP------- 759
Query: 667 IALIWKFDFSPFMVLIIA 684
+ +PF++ IIA
Sbjct: 760 -------EITPFLIFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 2e-57
Identities = 78/223 (34%), Positives = 130/223 (58%), Gaps = 4/223 (1%)
Query: 103 IVCLLVINSTISFIEENNAGNAAAALMAGLAPK-TKLLRDGKWSEEEAAILVPGDIISIK 161
I+ L++IN+ + +E A A AL L P ++RDGK E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 162 LGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVH 221
GD +PAD R++EG L+VD+SALTGESLPV K+ GD VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 222 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDN 280
T GK A LV+ Q++L + + I + + + + +++ + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 5e-54
Identities = 150/580 (25%), Positives = 234/580 (40%), Gaps = 115/580 (19%)
Query: 115 FIEENNAGNAAAAL--MAGLAPKT--KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADA 170
++E G A+ AL +A L P T L DG+ E +L PGDI+ + G+ IP D
Sbjct: 69 WLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDG 128
Query: 171 RLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230
++EG+ +VD+S +TGESLPV K GD V +G+ G + ATG T + L
Sbjct: 129 TVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRL 187
Query: 231 VDSTNQ------------VGHFQKVLTAIGNFCICS-IAVGMLVEIIVMYPIQHRKYRDG 277
V Q G+F V+ AI + +G + +
Sbjct: 188 VRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFVFALEVAVT------- 240
Query: 278 IDNLLVLLIG---GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
VL+I + +A PTV+ A+ + ++ G + K A+E A +D + DK
Sbjct: 241 -----VLIIACPCALGLATPTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDK 291
Query: 335 TGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARA 394
TGTLT K +V + VF + + + L AA + +E+ + AIV
Sbjct: 292 TGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIVSYA-------- 339
Query: 395 GIREVHFFPFNPVDKRT---ALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAII 451
+ D + +GH + G + + LK
Sbjct: 340 --KAKGITLSQVSDFKAIPGIGVEGTVEGHTIQL--GNEKLLGEN-----GLKTDGEVEE 390
Query: 452 DKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNV 511
L E+ G+L L D + ++ E I+ G+
Sbjct: 391 GGGTTS---VLVAVNGEL--------------AGVLALADQLKPEAKEVIQALKRRGIEP 433
Query: 512 KMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571
M+TGD AK + LG IE + A V P+
Sbjct: 434 VMLTGDNRKTAKAVAKELG----------------------------IE--NVRAEVLPD 463
Query: 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 631
K ++KKLQE+ + M GDG+NDAPAL +AD+GIA+ TD A A+D+VL L+
Sbjct: 464 DKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLND 523
Query: 632 IISAVLTSRAIFQRMKN-------YTIYAVSITIRIVFGF 664
+ +A+ SR +R+K Y + A+ I +++
Sbjct: 524 VATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPA 563
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 186 bits (474), Expect = 3e-50
Identities = 165/598 (27%), Positives = 250/598 (41%), Gaps = 107/598 (17%)
Query: 106 LLVINSTISFIEENNAGNAA---AALMAGLAPKT-KLLRDGKWSEEEAAILVPGDIISIK 161
LL++ S +EE +G A ALM LAP T ++LR G E L GD++ +K
Sbjct: 24 LLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKVGDVVVVK 82
Query: 162 LGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVH 221
G+ +P D +L G VD+SALTGES+PV K PGDEVF+G+ G + VV
Sbjct: 83 PGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPAD 141
Query: 222 TFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDN 280
+ K +LV ++ ++ Q+ + + + L +V ++ ++ +
Sbjct: 142 STIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYR 199
Query: 281 LLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 338
LVLL+ P A+ V+S A ++ G + K A+E +A + + DKTGTL
Sbjct: 200 ALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTL 257
Query: 339 TLNKLSV-DKNLIEVF--AKGVEK--DHVMLLAARASRTENQDAID-AAIVGMLADPKEA 392
T + V D EV A E+ H + A + ++ + G
Sbjct: 258 TTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAIVDYARKRENVESVEEVPGE------- 310
Query: 393 RAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIID 452
G+R V VD I + A PE VH
Sbjct: 311 --GVRAV-------VDGGEV--RIGNPRSLEAAVGARPESAGKTI---------VH---- 346
Query: 453 KYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NV 511
VAR ++G + L D PR D+AE I LG+ V
Sbjct: 347 -----------VARDG-------------TYLGYILLSDEPRPDAAEAIAELKALGIEKV 382
Query: 512 KMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571
M+TGD+ A+A+ R LG ++E+ A + PE
Sbjct: 383 VMLTGDRRAVAERVARELG------------------------IDEV------HAELLPE 412
Query: 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLS 630
K EIVK+L+E+ M GDG+NDAPAL AD+GIA+ A +D A +D+VL LS
Sbjct: 413 DKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLS 472
Query: 631 VIISAVLTSRAIFQRMK-NYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILN 687
+ A+ +R + +K N I I + I+ + +W ++ ILN
Sbjct: 473 RLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 5e-42
Identities = 111/356 (31%), Positives = 163/356 (45%), Gaps = 63/356 (17%)
Query: 426 SKGAPEQILALCN-----------AKEDLKKKVHAIIDKYAER-GLRSLAVARQEVPERT 473
KGAPE +L C + +K + ++I + LR LA+A +++P+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 474 KESPGGPWQ----------FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK 523
+E F+G++ + DPPR + A+ I + G+ V MITGD A+
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 524 ETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADG-----------FAGVFPEH 572
RR+G + D+D + + E E F+ V P H
Sbjct: 569 AICRRIG----------IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVI 632
K E+V+ LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 633 ISAVLTSRAIFQRMKNYTIYAVSITI-RIVFGFMFIALIWKFDFSPFMVLIIAILNDG-- 689
++AV RAI+ MK + Y +S I +V F+ AL P +L + ++ DG
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738
Query: 690 -----------TIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTV-IFFW 733
IM R PL W +F +V+G Y+ L TV F W
Sbjct: 739 ATALGFNPPDKDIMWKPPRRPD-EPLITGW----LFFRYLVVGVYVGLATVGGFVW 789
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 1e-39
Identities = 175/802 (21%), Positives = 286/802 (35%), Gaps = 175/802 (21%)
Query: 30 LKCTREGLSSTEG--ANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAA------ 81
C T G A R +G N++E S FL + E
Sbjct: 131 STCAGHSNGLTTGDIAQRKAKYGKNEIEIPVPS----FLELLKE------EVLHPFYVFQ 180
Query: 82 VMAIALANGEGKPPDW---QDFVGIVCLLVINSTISFIEENNAGNAAAAL--MAGLAPKT 136
V ++ L W + + +C++ ++ST + L M
Sbjct: 181 VFSVIL---------WLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSV 231
Query: 137 KLLRDGKWSEEEAAILVPGDIISIKL--GDIIPADARLLEGDPLKVDQSALTGESLPVTK 194
++R+GKW + LVPGDI+SI +P D+ LL G + V++S LTGES+PV K
Sbjct: 232 IVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLK 290
Query: 195 NP------GDEV------------FSG-------STCKQGEIEAVVIATGVHTFFGKAAH 229
P DE F G A+V+ TG T G+
Sbjct: 291 FPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVR 350
Query: 230 -LVDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGG 288
++ +V F K F +G + II + + + +L ++ I
Sbjct: 351 SILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIV- 409
Query: 289 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD-- 346
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L +
Sbjct: 410 VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGV 469
Query: 347 --KNLIEVFAKGVEKD-------HVMLLAARASRTENQDAI--DAAIVGML--------- 386
+ + F K V +D LA S T+ + + D M
Sbjct: 470 QGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEE 529
Query: 387 -ADPKEARAGIREVHF------------FPFNPVDKRTA-LTYIDSDGHWHRASKGAPEQ 432
+ E + + V F F+ +R + + + + KGAPE
Sbjct: 530 DDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPET 589
Query: 433 ILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERT--------KESPGGPWQFV 484
I +LC+ E + ++ Y G R LA+A +E+P+ T +++ F+
Sbjct: 590 IQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFL 648
Query: 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----SAS 540
G + +P + D+ E I+ + MITGD A R G+ A
Sbjct: 649 GFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAE 708
Query: 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGD-------- 592
K I ++ + + +P + + L R H+ M+G
Sbjct: 709 PPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA-MSGKAFAVLQAH 767
Query: 593 ------------------------------------------GVNDAPALKKADIGIAV- 609
G ND ALK+AD+GI++
Sbjct: 768 SPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS 827
Query: 610 -ADATDAARGASDIVLTEPGLSVII---SAVLTSRAIFQRMKNYT-IYAVSITIRIVFG- 663
A+A+ AA S + +VI A++TS +F+ M Y+ I S++I + G
Sbjct: 828 EAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGS 887
Query: 664 ------FMFIALIWKFDFSPFM 679
F+ I L+ F + M
Sbjct: 888 NLGDGQFLTIDLLLIFPVALLM 909
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 2e-36
Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 30/297 (10%)
Query: 79 AAAVMAIALA---NGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPK 135
AA ++ LA GE + + I+ +LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 136 TKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN 195
K+LRDG+WS +A LVPGDI+ + +GD +PAD R+L L+VDQS LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 196 ----PGDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 241
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 242 KVLTAIGNFCICSIAVGMLVEIIVMYPIQH--------RKYRDGIDNLLV---LLIGGIP 290
K L G + S +G++ ++ + I H + I + L + IP
Sbjct: 195 KKLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIP 252
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 347
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N++SV K
Sbjct: 253 EGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 143 bits (364), Expect = 2e-35
Identities = 131/504 (25%), Positives = 209/504 (41%), Gaps = 80/504 (15%)
Query: 137 KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNP 196
L DG A L GDI+ ++ G+IIP+D ++EG VD+SA+TGES PV +
Sbjct: 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 197 G---DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG-NFCI 252
G V G+ ++ + A TF + LV+ + QK I +
Sbjct: 167 GGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER----QKTPNEIALTILL 222
Query: 253 CSIAVGMLVEIIVMYPIQHRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
+ + L+ + +YP Y G + L+ LL+ IP + +LS G R+
Sbjct: 223 SGLTLIFLLAVATLYPFAI--YSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV 280
Query: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIEVFAKGVEKDHVMLLAA 367
+Q I A+E +D L DKTGT+TL N+ + + I V GV ++ + A
Sbjct: 281 TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV--PGVSEEELADAAQ 336
Query: 368 RAS---RTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
AS T +I + + +E F PF +T ++ +D G
Sbjct: 337 LASLADETPEGRSIVELAKKLGIELRE-DDLQSHAEFVPFT---AQTRMSGVDLPGG-RE 391
Query: 425 ASKGAPEQILALCNAKE-DLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQF 483
KGA + I + + + + A +D+ + G L V +
Sbjct: 392 IRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RI 438
Query: 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSA 539
+G++ L D + E +G+ MITGD AIA E G
Sbjct: 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG------------- 485
Query: 540 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 599
V++ I +A PE K ++++ Q + MTGDG NDAPA
Sbjct: 486 ---------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPA 524
Query: 600 LKKADIGIAVADATDAARGASDIV 623
L +AD+G+A+ T AA+ A+++V
Sbjct: 525 LAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 2e-32
Identities = 124/443 (27%), Positives = 195/443 (44%), Gaps = 71/443 (16%)
Query: 350 IEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDK 409
I VFAK + H L N++ + I E FPF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE---FPFDSEIK 538
Query: 410 RTALTYIDSDGHWHRA-SKGAPEQILALC---NAKEDLK---------KKVHAIIDKYAE 456
R A Y D+ G + +KGA E+I+ C N K+ +K + + A ++ A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 457 RGLRSLAVARQEV---------------PERTKESPGGPWQFVGLLPLFDPPRHDSAETI 501
GLR LA A + T ES +F+GL+ ++DPPR++SA +
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNESAGAV 655
Query: 502 RRALNLGVNVKMITGDQLAIAKETGRRLG-MGTNMY-------PSASLLGQDKDA----S 549
+ G+NV M+TGD AK + +G + N S + G DA
Sbjct: 656 EKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE 715
Query: 550 IAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609
+ L L+ A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 716 VDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 610 A-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA----VSITIRIVFGF 664
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ V+ I ++ G
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGL 830
Query: 665 MFIALIWK--FDFSPFMVL-IIAILNDGTIMTISKDRVKPS----PLPDS------WKL- 710
F K F SP +L I I + M + ++ P D+ +L
Sbjct: 831 AFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELI 890
Query: 711 KEIFATGVVLGGY-LALMTVIFF 732
++FA G LGG LA T I +
Sbjct: 891 IDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 133 bits (335), Expect = 1e-31
Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 62/361 (17%)
Query: 35 EGLSSTEGANRLQIFGPNKLE-EKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGK 93
EGL+ E +RL+ G N+LE + L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 94 PPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILV 153
DW + I ++ +N I FI+E A +L +P ++R+GK ++ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 154 PGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNP------------GDEV- 200
PGDI +K GD IPAD RL+E D++ LTGESLPV K+ GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 201 --FSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 231
FS S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 232 DSTNQVGHF---------QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLL 282
+ G F + L+ + C + ++ IIVM + ++ +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 283 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T K
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 343 L 343
+
Sbjct: 375 M 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 7e-31
Identities = 141/533 (26%), Positives = 211/533 (39%), Gaps = 140/533 (26%)
Query: 137 KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNP 196
KL G E A L GDI+ ++ G+IIPAD ++EG VD+SA+TGES PV +
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 197 GDEVFS---GSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK----------- 242
G + S G+ I + A +F + LV+ + QK
Sbjct: 167 GGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR----QKTPNEIALTILL 222
Query: 243 -VLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDG---IDNLLVLLIGGIPIAMPTVLS 298
LT I L+ + + P Y G I L+ LL+ IP + +LS
Sbjct: 223 AGLTII-----------FLLVVATLPPFAA--YSGGALSITVLVALLVCLIPTTIGGLLS 269
Query: 299 VTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIEVF- 353
AIG R+ Q I A+E +D L DKTGT+TL N+ + + F
Sbjct: 270 ---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE------FL 320
Query: 354 -AKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADP-----------------KEARAG 395
GV + ++ DAA + LAD +E
Sbjct: 321 PVPGVTE---------------EELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQ 365
Query: 396 IREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-EDLKKKVHAIIDKY 454
F PF+ +T ++ +D DG R KGA + I + ++ A +D+
Sbjct: 366 SLHATFVPFS---AQTRMSGVDLDGREIR--KGAVDAIRRYVESNGGHFPAELDAAVDEV 420
Query: 455 AERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 514
A +G L VA + +G++ L D + E +G+ MI
Sbjct: 421 ARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMI 467
Query: 515 TGD-QL---AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570
TGD L AIA E G V++ + +A P
Sbjct: 468 TGDNPLTAAAIAAEAG----------------------------VDDFLAEAT------P 493
Query: 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
E K ++++ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 494 EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 1e-29
Identities = 148/536 (27%), Positives = 229/536 (42%), Gaps = 107/536 (19%)
Query: 127 ALMAGLAPKTKL-LRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSAL 185
ALMA L P+T LRDG+ E A L PGD+I + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 186 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ--------V 237
TGES+PV + G++V +G+T + V++ + + HL++ + +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFI 353
Query: 238 GHFQKVLT-AIGNFCICSIAVGMLVEII--VMY--PIQHRKYRDGIDNLLVLLIGGIPIA 292
F ++ T AI + V +LV ++ +++ P Q YR L +LLI G P A
Sbjct: 354 DRFSRIYTPAI-------MLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCA 401
Query: 293 MPTVLSVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI 350
+ V+S AI S +++GA+ K A+E++ + + DKTGTLT K V
Sbjct: 402 L--VISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV----T 455
Query: 351 EVF-AKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDK 409
++ A G+ + ++ LAA A++ LA A +R + +
Sbjct: 456 DIHPATGISESELLALAA---------AVEQGSTHPLAQAIVREAQVRGL---AIPEAES 503
Query: 410 RTALTYI----DSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVA 465
+ AL +G AP ++ L +A I++ G + V
Sbjct: 504 QRALAGSGIEGQVNGERVLIC--APGKLPPLADA-------FAGQINELESAGKTVVLVL 554
Query: 466 RQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET 525
R + +GL+ L D R D+ + I LG+ M+TGD A
Sbjct: 555 RNDDV-------------LGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAI 601
Query: 526 GRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKH 585
LG+ D AG+ PE K + V +L +
Sbjct: 602 AGELGI-------------------------------DFRAGLLPEDKVKAVTELNQHAP 630
Query: 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRA 641
+ M GDG+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 631 L-AMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 6e-29
Identities = 132/578 (22%), Positives = 247/578 (42%), Gaps = 75/578 (12%)
Query: 100 FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLR-DGKWSEEEAAILVPGDII 158
+ ++ L+ N + + E A A K + ++ DG + +A+ L G I+
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIV 129
Query: 159 SIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG---DEVFSGSTCKQGEIEAVV 215
+ G+ IP D ++++G VD+SA+TGES PV K G D V G++ +E +
Sbjct: 130 RVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188
Query: 216 IATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCIC-SIAVGMLVEIIVMYPI-QHRK 273
+ H+F K LV+ + +K I F + ++ + LV I+ MYP+ +
Sbjct: 189 TSEPGHSFLDKMIGLVEGATR----KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLN 244
Query: 274 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333
+ I L+ L + IP + +LS G R++Q + K ++E ++VL D
Sbjct: 245 FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILD 304
Query: 334 KTGTLTL-NKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEA 392
KTGT+T N+++ I V + E+ L+ A + D + + LA +
Sbjct: 305 KTGTITYGNRMADA--FIPVKSSSFER----LVKAAYESSIADDTPEGRSIVKLAYKQHI 358
Query: 393 RAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILA-LCNAKEDLKKKVHAII 451
+ PF + + + + + + KGAP ++ + A + + A++
Sbjct: 359 DLPQEVGEYIPFTAETRMSGVKFTTREVY-----KGAPNSMVKRVKEAGGHIPVDLDALV 413
Query: 452 DKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNV 511
+++G L V +G++ L D + E R +G+
Sbjct: 414 KGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIET 460
Query: 512 KMITGD-QL---AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567
M TGD +L IAKE G V+ + +
Sbjct: 461 VMCTGDNELTAATIAKEAG----------------------------VDRFVAECK---- 488
Query: 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 627
PE K ++++ Q + HI MTGDG NDAPAL +A++G+A+ T +A+ A++++ +
Sbjct: 489 --PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDS 546
Query: 628 GLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 665
+ ++ VL + + + T ++++ I F +
Sbjct: 547 NPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAIL 584
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 3e-28
Identities = 131/502 (26%), Positives = 206/502 (41%), Gaps = 77/502 (15%)
Query: 137 KLLR-DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN 195
KLLR DG + A L GDI+ ++ GD+IP D ++EG VD+SA+TGES PV K
Sbjct: 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKE 166
Query: 196 PGDEVFS---GSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG-NFC 251
G + S G+ + A TF + LV+ + +K I
Sbjct: 167 SGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQR----RKTPNEIALTIL 222
Query: 252 ICSIAVGMLVEIIVMYPIQHRKYRD---GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
+ ++ + L+ ++P Y + L+ LL+ IP + +LS G R+
Sbjct: 223 LIALTLVFLLVTATLWPFAA--YGGNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV 280
Query: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIEVFAKGVEKDHVMLLAA 367
I A+E +D L DKTGT+TL N+L+ + + A+GV++ + A
Sbjct: 281 LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF----IPAQGVDEKTLADAAQ 336
Query: 368 RASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASK 427
AS + D + + +LA R + F +T ++ I+ D K
Sbjct: 337 LASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNG-RMIRK 393
Query: 428 GAPEQILALCNA-KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486
GA + I A + + +D+ A +G L V + G+
Sbjct: 394 GAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN-------------RIYGV 440
Query: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSASLL 542
+ L D + E + +G+ MITGD AIA E G
Sbjct: 441 IYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG---------------- 484
Query: 543 GQDKDASIAALPVEELIEKADGF-AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
D F A PE K ++++ Q + MTGDG NDAPAL
Sbjct: 485 -------------------VDDFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALA 525
Query: 602 KADIGIAVADATDAARGASDIV 623
+AD+G+A+ T AA+ A+++V
Sbjct: 526 QADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 2e-18
Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 38/170 (22%)
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYP 537
+ LL + DP R DS ++R G + M+TGD AIAKE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 538 SASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDA 597
++E+I AGV P+ K E +K+LQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 598 PALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 1e-17
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 16 VDLERIPIEEVFEQLKCTRE-GLSSTEGANRLQIFGPNKLEE-KKESKILKFLGFMWNPL 73
+D + +EEV E+L+ E GLSS E A RL+ +GPN+L KK S +L+FL NPL
Sbjct: 2 LDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPL 61
Query: 74 SWVMEAAAVMAIAL 87
+++ AAAV++ L
Sbjct: 62 IYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 5e-13
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 20 RIPIEEVFEQLKCTRE-GLSSTEGANRLQIFGPNKL-EEKKESKILKFLGFMWNPLSWVM 77
+ +EEV +L E GL+ E RL+ +GPN+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 78 EAAAVMA 84
AA+++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-08
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 154 PGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEA 213
PG ++ + GD +P D + +G+ +D++ LTGE +P K GD V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 214 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMY-- 267
A G HT + +V S ++G ++A+ F + + ++ I +
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAIWYFFG 459
Query: 268 PIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIEE 323
P Y LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 460 PAPQIVYT------LVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 324 MAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAA 367
+ +D L DKTGTLT K V ++ F GV++ + LAA
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVA--VKTFN-GVDEAQALRLAA 554
|
Length = 834 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 5e-08
Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 19/162 (11%)
Query: 443 LKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIR 502
K+ ++ + R L + + + +GL+ L DP + E ++
Sbjct: 45 TKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALK 104
Query: 503 RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562
G+ + ++TGD A R LG+ A + P ++ E A
Sbjct: 105 ELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSADLYGLVGVGKPDPKIFELA 159
Query: 563 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 604
+++L + M GDGVND PA K A
Sbjct: 160 --------------LEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-07
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 548 ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607
A +PVE + FAG PE K +I+++L++R M G+G ND AL++AD+GI
Sbjct: 63 AEFVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
Query: 608 AV---ADATDAARGASDIVLTEPGLSVIISA 635
+ +D+VL E + +
Sbjct: 117 CTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 376 DAIDAAIVG----MLADPKEARAGIREVHFFPFNPVDKR-TALTYIDSDGHWHRASKGAP 430
D ++A++ + D +E RA V PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 431 EQILALCN 438
E+IL C+
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 627
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 557 ELIEKADGFAG------VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIG 606
L + G V +K + + L ++ I GDG ND +K A +G
Sbjct: 131 RLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLG 190
Query: 607 IAVADATDAARGASDIVLTEPGLSVIIS 634
IA +A + +DI + + L+ I+
Sbjct: 191 IAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|213628 TIGR01487, Pglycolate_arch, phosphoglycolate phosphatase, TA0175-type | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.004
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 533 TNMYPSASLLGQDKDASIAALPVEELIE---------KADGFAGVF---PEHKYEIVKKL 580
+N YP ASL+ ++ V+E+ E A GFA K V+KL
Sbjct: 101 SNEYPRASLVI-MREGKD----VDEVREIIKERGLNLVASGFAIHIMKKGVDKGVGVEKL 155
Query: 581 QERKHICG----MTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 627
+E I GD ND + +AVA+A D + +D V + P
Sbjct: 156 KELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNP 206
|
This group of Archaeal sequences, now known to be phosphoglycolate phosphatases, is most closely related to the sucrose-phosphate phosphatases from plants and cyanobacteria (TIGR01485). Together, these two models comprise a subfamily model (TIGR01482). TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Length = 215 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 953 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.57 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.36 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.34 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.19 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.91 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.86 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.82 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.81 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.78 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.78 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.77 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.77 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.72 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.71 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.7 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.7 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.6 | |
| PLN02887 | 580 | hydrolase family protein | 98.58 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.56 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.54 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.54 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.46 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.44 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.43 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.39 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.38 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.38 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.29 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.26 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.25 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.24 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.15 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.06 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.02 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.98 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.96 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.91 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.85 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.82 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.73 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.73 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.7 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.65 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.5 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.44 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.43 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.43 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.34 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.34 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.17 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.13 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.09 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.05 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.98 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.96 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.93 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.89 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.86 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.76 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.72 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.71 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.71 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.68 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.53 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.42 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.37 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.36 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.28 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.18 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.11 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.11 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.09 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.08 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.07 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.04 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.99 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.94 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.86 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.74 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.67 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.65 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.63 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.63 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.54 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.47 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.43 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.27 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.25 | |
| PLN02940 | 382 | riboflavin kinase | 95.21 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.19 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.92 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.53 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.52 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.34 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.26 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.08 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.98 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.54 | |
| PLN02811 | 220 | hydrolase | 92.93 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.72 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.46 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.4 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.37 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 92.3 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.25 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.14 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.46 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.16 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 90.99 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.84 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 90.6 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 90.11 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 89.28 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 89.07 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 89.05 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.83 | |
| PLN02580 | 384 | trehalose-phosphatase | 86.66 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 85.64 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 85.24 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 85.06 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 84.97 | |
| PLN03017 | 366 | trehalose-phosphatase | 83.59 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 83.5 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 80.03 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-200 Score=1635.16 Aligned_cols=942 Identities=88% Similarity=1.337 Sum_probs=925.2
Q ss_pred CCccccchhhhcccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHH
Q 002208 1 MGDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAA 80 (953)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ 80 (953)
|.++..+++++++|.+|++..|.++|+++|.|+..|||++|+++|+++||+|+++++|++.+++|+.+||||++|+|+++
T Consensus 1 m~e~l~s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaA 80 (942)
T KOG0205|consen 1 MIEELDSLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAA 80 (942)
T ss_pred CcccccchhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHH
Confidence 45666668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEE
Q 002208 81 AVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISI 160 (953)
Q Consensus 81 ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l 160 (953)
|++++.+.+++|++++|.|+++|++++++|++++|+||++++++.++||+.++++++|+|||+|.++++++||||||+.+
T Consensus 81 AimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsi 160 (942)
T KOG0205|consen 81 AIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSI 160 (942)
T ss_pred HHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCCcH
Q 002208 161 KLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (953)
Q Consensus 161 ~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~~l 240 (953)
+.||+||||+||++|+.++||||+|||||.||+|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+||
T Consensus 161 k~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHF 240 (942)
T KOG0205|consen 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (942)
T ss_pred ccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhH
Q 002208 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (953)
Q Consensus 241 q~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~ 320 (953)
|++++.|+++|++++++++++.++++|+.+++.++..+.+.++++++.||+|||.++++++++|+.||+++|+++|+++|
T Consensus 241 qkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 241 QKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEE
Q 002208 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVH 400 (953)
Q Consensus 321 iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~ 400 (953)
+|+|+++|++|+|||||||.|+++|++..++.+.+|.++|++++.|+++++.+++|++|.|+++++.||++++.+|++++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevh 400 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVH 400 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEe
Confidence 99999999999999999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCC
Q 002208 401 FFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGP 480 (953)
Q Consensus 401 ~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~ 480 (953)
++||||..||.+.+|.++||++++++||||+.|+++|+.++++++++++.+++||++|+|.|+||++..++..++..+.+
T Consensus 401 F~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~p 480 (942)
T KOG0205|consen 401 FLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGP 480 (942)
T ss_pred eccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHH
Q 002208 481 WQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560 (953)
Q Consensus 481 l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 560 (953)
|+|+|+..+.||||+|+.++|++....|++|+|+|||+...++++++++|+.+|++|+..+.|...++.+...+++++++
T Consensus 481 w~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie 560 (942)
T KOG0205|consen 481 WEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE 560 (942)
T ss_pred cccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhH
Q 002208 561 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSR 640 (953)
Q Consensus 561 ~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR 640 (953)
+.+.||.++|+||+++|+.||++||+|+|+|||+||+||||+||+|||+.+++|+|+.+||+||++++++.|+.++..||
T Consensus 561 ~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSr 640 (942)
T KOG0205|consen 561 KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (942)
T ss_pred hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhhhchhccccCCCCCCCCCCccchHHHHHHHHHH
Q 002208 641 AIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVL 720 (953)
Q Consensus 641 ~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~ 720 (953)
.+|+||++|.+|+++.++.+++++++..+.|.|.|+|++++++++++|++.|++++|+++|+|.|++|+++++|..++++
T Consensus 641 aIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVl 720 (942)
T KOG0205|consen 641 AIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVL 720 (942)
T ss_pred HHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHH
Q 002208 721 GGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQL 800 (953)
Q Consensus 721 G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~ 800 (953)
|.|+++++..+||..+.+.||+..||+.....+..+.....|+++++.+|+++|++|+++|+|.++|+++++++++.+++
T Consensus 721 gtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aql 800 (942)
T KOG0205|consen 721 GTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQL 800 (942)
T ss_pred hhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999988877888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchhHHHhhhccccccccccCChhhHHHHHH
Q 002208 801 VATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWA 880 (953)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (953)
+++++++|++|.|.+.++++|.|..++|++++..+++.++.|+..||.+++.+|++.++++++++.||+|++++|++||+
T Consensus 801 iatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~ 880 (942)
T KOG0205|consen 801 IATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWA 880 (942)
T ss_pred HHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccCCCCCcCCCCCCCccchhhhHHHHHHHHHHHHHHHhhhhccccchhhhHhhcCCChhhhhccccC
Q 002208 881 LAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953 (953)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (953)
.+||++||.++++ .+|+++++||++||+|++||||+|+++||++|++|+||+|+|++ |||||
T Consensus 881 ~~qrt~~~lq~~~----------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 881 LAQRTLHGLQPPE----------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred HhhhhhcccCCCc----------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999999884 28899999999999999999999999999999999999999999 88997
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-143 Score=1220.76 Aligned_cols=823 Identities=28% Similarity=0.419 Sum_probs=683.1
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC
Q 002208 16 VDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEK-KESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGK 93 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~ 93 (953)
.+.|..+.+|++..|.++ ++|||++|+.+|+++||+|+++.. ..+.|+++++||.||+..+|+++|++|+++.
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~----- 76 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA----- 76 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-----
Confidence 356778999999999999 679999999999999999999855 5889999999999999999999999999987
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEE
Q 002208 94 PPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLL 173 (953)
Q Consensus 94 ~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll 173 (953)
.|.+++.|.+++++|++++++||||++|++++|+++.++.++|+|+|+.+.++++||||||||.|+-||+||||.||+
T Consensus 77 --~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~ 154 (972)
T KOG0202|consen 77 --DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLI 154 (972)
T ss_pred --hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEE
Confidence 888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeEEeecCCCCCCeeEecCC--------------CCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCC
Q 002208 174 EGDPLKVDQSALTGESLPVTKNP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVG 238 (953)
Q Consensus 174 ~g~~l~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~ 238 (953)
+..++.||||+|||||.||.|.. .|++|+||.|..|.+.|+|+.||.+|++|++.+.+++.+ .++
T Consensus 155 e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kT 234 (972)
T KOG0202|consen 155 EAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKT 234 (972)
T ss_pred eeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCC
Confidence 99889999999999999999954 258999999999999999999999999999999998874 699
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc---c-c---cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHh
Q 002208 239 HFQKVLTAIGNFCICSIAVGMLVEIIV--MYPI---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (953)
Q Consensus 239 ~lq~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~ 309 (953)
|+|+.++.+++.+.-.+.++++..++. .|+. . + ..+.+.|..++++.+++||+|||++++++++.|.+||+
T Consensus 235 PLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMa 314 (972)
T KOG0202|consen 235 PLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMA 314 (972)
T ss_pred cHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHH
Confidence 999999999987652222222222222 2221 1 2 34556788889999999999999999999999999999
Q ss_pred hCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehh-----------ccCC------------------ChH
Q 002208 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-----------AKGV------------------EKD 360 (953)
Q Consensus 310 ~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~-----------~~~~------------------~~~ 360 (953)
|++++||++.++|+||.+++||||||||||+|+|++.+.++... ..++ ..+
T Consensus 315 kknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~ 394 (972)
T KOG0202|consen 315 KKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDND 394 (972)
T ss_pred hhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccH
Confidence 99999999999999999999999999999999999999775211 0011 111
Q ss_pred ---HHHHHHHHhccC------c-----CCChHHHHHHHhcC-----Chhh--------------hhcCcceEEeecCCCC
Q 002208 361 ---HVMLLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE--------------ARAGIREVHFFPFNPV 407 (953)
Q Consensus 361 ---~~l~~a~~~~~~------~-----~~~~~~~ai~~~~~-----~~~~--------------~~~~~~~l~~~pF~s~ 407 (953)
+++..++.|+.. . .++|+|.|+...+. +... ....++....+||+++
T Consensus 395 ~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 395 LLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 233334444321 1 24688888876542 1110 1122345589999999
Q ss_pred CceEEEEEEcCCCc--EEEEEeCcHHHHHHHhhc------------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCC-C
Q 002208 408 DKRTALTYIDSDGH--WHRASKGAPEQILALCNA------------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPE-R 472 (953)
Q Consensus 408 ~kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~-~ 472 (953)
+|+|++.+.++.|+ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|||+||+|+++.+. .
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 99999999876664 789999999999999953 34568889999999999999999999997763 1
Q ss_pred ----------CCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcc
Q 002208 473 ----------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSAS 540 (953)
Q Consensus 473 ----------~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~ 540 (953)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||++||+++|+..+.. ....
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 2456789999999999999999999999999999999999999999999999999999976432 4456
Q ss_pred ccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhc
Q 002208 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGA 619 (953)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~a 619 (953)
++|.+.+ .++++++++...+..+|+|++|+||.+||+.||++|++|+|||||+||+||||+|||||||| +|||+||+|
T Consensus 635 ~TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 635 LTGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA 713 (972)
T ss_pred cchhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence 7777666 78999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCccHHHHHHHHHhhhhc-hhccccC
Q 002208 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF-IALIWKFDFSPFMVLIIAILNDGT-IMTISKD 697 (953)
Q Consensus 620 aDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d 697 (953)
||+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+.++++ ..+..+.|+.|+|+||+|+++|++ +++++++
T Consensus 714 sDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~e 793 (972)
T KOG0202|consen 714 SDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFE 793 (972)
T ss_pred hhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCC
Confidence 99999999999999999999999999999999999999987776666 456689999999999999999998 5999999
Q ss_pred CCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCcccc----------CC------CH
Q 002208 698 RVKPS---PLPDSWK----LKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAI----------RD------SE 754 (953)
Q Consensus 698 ~~~~~---~~p~~~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~------~~ 754 (953)
++++. ++|++++ ...++...+.+|+|+.+.++..|++.+... ......+.. .. ..
T Consensus 794 p~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~ 871 (972)
T KOG0202|consen 794 PVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFED 871 (972)
T ss_pred CCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhcc
Confidence 98875 3444433 345566667779999998886665443210 110000000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCcccCh---hHHHHHHHHHHHHHHHHHHHhhc--ccccccccchHhHHHHHHH
Q 002208 755 HEMMAALYLQVSIVSQALIFVTRSRSWSYLERP---GLLLVTAFVIAQLVATLIAVYAN--WGFARIKGVGWGWAGVIWL 829 (953)
Q Consensus 755 ~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 829 (953)
....|+.|..+++...++.++.|+...+.+..| |.|++.++.++++...++ +|.+ -..+++.+++|.-|++++.
T Consensus 872 ~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~ 950 (972)
T KOG0202|consen 872 MCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLA 950 (972)
T ss_pred cccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHH
Confidence 122377788889999999999999886654432 448888888877665444 6654 1234677888877777789
Q ss_pred HHHHHHHHHHHHHHHhHHhc
Q 002208 830 YSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 830 ~~~~~~~~~~~~K~~~r~~~ 849 (953)
++..+++++|++|++.|++.
T Consensus 951 ~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 951 ISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HhhhhhhHHHHHHHHHHhcc
Confidence 99999999999999998765
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-134 Score=1230.89 Aligned_cols=753 Identities=60% Similarity=0.957 Sum_probs=677.1
Q ss_pred CCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002208 36 GLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISF 115 (953)
Q Consensus 36 GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~ 115 (953)
|||++||++|+++||+|++++++++.|+.|+++|++|++|+|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999976 89999999999999999999
Q ss_pred HHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecC
Q 002208 116 IEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN 195 (953)
Q Consensus 116 ~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~ 195 (953)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.||.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 002208 196 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKY 274 (953)
Q Consensus 196 ~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 274 (953)
+||.+|+||.|.+|++.++|++||.+|++||+++++++++ .++++|+.+++++.+++..+++.+++.+++++...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 678999999999988765554434443333333256788
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhc
Q 002208 275 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFA 354 (953)
Q Consensus 275 ~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 354 (953)
.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998763 22
Q ss_pred cCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEcCC-CcEEEEEeCcHHHH
Q 002208 355 KGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSD-GHWHRASKGAPEQI 433 (953)
Q Consensus 355 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~i 433 (953)
.+.++++++.+++.++....+||+|.|+++++.+....+..++.++.+||++.+|+|++++.+++ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887776666799999999987665545567888999999999999999987654 77788999999999
Q ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEE
Q 002208 434 LALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 513 (953)
Q Consensus 434 l~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~m 513 (953)
+++|++..+.++++++.+++++++|+|++++|+++ .|++|+|+|+++|+||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888999999999999999999983 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCC
Q 002208 514 ITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDG 593 (953)
Q Consensus 514 iTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG 593 (953)
+|||++.||.++|+++||..+......+......+.++++++++.+++.++|||++|+||+++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976544333343333445778889999999999999999999999999999999999999999
Q ss_pred ccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 002208 594 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKF 673 (953)
Q Consensus 594 ~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 673 (953)
+||+|||++|||||||++|+|+||++||+||++|+|++|+.++++||++|+||++|+.|.++.|+..++.+++..+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877777767778
Q ss_pred CccHHHHHHHHHhhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCC
Q 002208 674 DFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDS 753 (953)
Q Consensus 674 ~~~~~~il~i~l~~~~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 753 (953)
+++|+|++|+++++|++.+++++|+++|+++|++|...+++..+++.|++.++.++++||+.+...++...++ ....
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cccc
Confidence 8999999999999999899999999999999999999999999999999999999988877764222211111 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHh
Q 002208 754 EHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVY 808 (953)
Q Consensus 754 ~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 808 (953)
..+.+|++|+.+++.+++++|+.|+++.+|.++|++++++++++.++++++++.|
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~ 755 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAVY 755 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhhC
Confidence 4578899999999999999999999999999999999999999999888877643
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-132 Score=1245.96 Aligned_cols=821 Identities=26% Similarity=0.394 Sum_probs=673.3
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 002208 15 TVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANGEG 92 (953)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~ 92 (953)
--|||..+.+|+++.|+++ .+|||++||++|+++||+|++++++ .++|+.|++||++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3589999999999999998 5799999999999999999999875 678999999999999999999999999986
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEE
Q 002208 93 KPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARL 172 (953)
Q Consensus 93 ~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 172 (953)
+|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||||
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEeecCCCCCCeeEecCCC---------------CcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC--
Q 002208 173 LEGDPLKVDQSALTGESLPVTKNPG---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 235 (953)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~K~~g---------------~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-- 235 (953)
++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++||+++++.+..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998999999999999999999742 57899999999999999999999999999999886431
Q ss_pred ----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 002208 236 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNL 281 (953)
Q Consensus 236 ----------------------------------~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (953)
.++|+|+.++++++++.++.++.+++.+++.+ . ..+...+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHHH
Confidence 13899999999998754433332222222111 1 1124567778
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh---h-----
Q 002208 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV---F----- 353 (953)
Q Consensus 282 l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~----- 353 (953)
++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+.+... +
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred ccCC---------------------------------------C---------hHHHHHHHHHhccC------------c
Q 002208 354 AKGV---------------------------------------E---------KDHVMLLAARASRT------------E 373 (953)
Q Consensus 354 ~~~~---------------------------------------~---------~~~~l~~a~~~~~~------------~ 373 (953)
..++ + ...++..++.|+.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 0000 0 01244445555421 1
Q ss_pred CCChHHHHHHHhcCCh----------hhh-------------------hcCcceEEeecCCCCCceEEEEEEcCCC-cEE
Q 002208 374 NQDAIDAAIVGMLADP----------KEA-------------------RAGIREVHFFPFNPVDKRTALTYIDSDG-HWH 423 (953)
Q Consensus 374 ~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~~ 423 (953)
.+||+|.|++.++... .+. ...|++++.+||||++|||+++++++++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 2599999998875311 011 2347889999999999999999987655 478
Q ss_pred EEEeCcHHHHHHHhhc------------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCC------------CCCCCC
Q 002208 424 RASKGAPEQILALCNA------------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERT------------KESPGG 479 (953)
Q Consensus 424 ~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~------------~~~~e~ 479 (953)
+++|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||++++.+ .+..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999963 2344677888999999999999999999886432 234688
Q ss_pred CcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--------CCccccCcccccccC
Q 002208 480 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSASLLGQDKDASIA 551 (953)
Q Consensus 480 ~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~l~~~~~~~~~~ 551 (953)
+|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||..+.. ...+++|.+.+ .++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-ALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hcC
Confidence 999999999999999999999999999999999999999999999999999974310 12455565544 677
Q ss_pred chhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCch
Q 002208 552 ALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 552 ~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~ 630 (953)
++++++++++..||||++|+||.++|+.+|++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 88899999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHhhhhc-hhccccCCCCCC-
Q 002208 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS- 702 (953)
Q Consensus 631 ~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~- 702 (953)
+|+.++.+||++|+||++++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|++ ++++++|++++.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999998887777665542 3689999999999999976 699999987664
Q ss_pred --CCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccC-----ccccC-CCHHHHHHHHHHHHHHHHH
Q 002208 703 --PLPD----SWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFG-----VRAIR-DSEHEMMAALYLQVSIVSQ 770 (953)
Q Consensus 703 --~~p~----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~-~~~~~~~t~~~~~~~~~~~ 770 (953)
++|+ +...++++...+++|+++++.++..|++.+.. +..+..+ .+..+ .+..+.+|++|.++++++.
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~ 951 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCAL 951 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCccccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 1221 22234566667788999999888776644311 1000000 00000 1244678999999999999
Q ss_pred HHHhhhccCCCCccc------------------ChhHHHHHHHHHHHHHHHHHHHhhc-c--cccccccchHhHHHHHHH
Q 002208 771 ALIFVTRSRSWSYLE------------------RPGLLLVTAFVIAQLVATLIAVYAN-W--GFARIKGVGWGWAGVIWL 829 (953)
Q Consensus 771 ~~~~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 829 (953)
+++|++|+.+.+.+. ..|.+++.+++++.++..++ +|.+ . .++++.+++|.|++ +++
T Consensus 952 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~~~ 1029 (1053)
T TIGR01523 952 ILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-AAA 1029 (1053)
T ss_pred HHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-HHH
Confidence 999999997643221 13457777777766665443 4543 2 25677888886655 578
Q ss_pred HHHHHHHHHHHHHHHhHHhc
Q 002208 830 YSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 830 ~~~~~~~~~~~~K~~~r~~~ 849 (953)
++++.++..|++|++.|++.
T Consensus 1030 ~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1030 ATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 88888899999999877664
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-132 Score=1228.27 Aligned_cols=808 Identities=27% Similarity=0.411 Sum_probs=677.4
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 002208 17 DLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKE-SKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPP 95 (953)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~ 95 (953)
..+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4557899999999999999999999999999999999998765 57889999999999999999999999975
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC------CeEEEEEccCcCCCcEEEEcCCCccccc
Q 002208 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD------GKWSEEEAAILVPGDIISIKLGDIIPAD 169 (953)
Q Consensus 96 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 169 (953)
+|.++++|++++++|..++++||+|+++++++|+++.+++++|+|| |++++|++++|||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred EEEEecCCeEEeecCCCCCCeeEecCCCC-------------cccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-C
Q 002208 170 ARLLEGDPLKVDQSALTGESLPVTKNPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 235 (953)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~ 235 (953)
|+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|++.++|++||.+|++||++++++++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccc
Q 002208 236 QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (953)
Q Consensus 236 ~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilv 315 (953)
+++|+|+.+++++++++.+.++.+.+.++ .+.+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 78999999999988765443332222222 22233457888999999999999999999999999999999999999999
Q ss_pred cchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCc--CCChHHHHHHHhcCCh--hh
Q 002208 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTE--NQDAIDAAIVGMLADP--KE 391 (953)
Q Consensus 316 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 391 (953)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999987531 22445667777777655432 3699999999876532 22
Q ss_pred hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeE
Q 002208 392 ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRS 461 (953)
Q Consensus 392 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~ 461 (953)
....++.++++||||.+|+|++++.+.++.+..++|||||.|+++|+. +++.++++.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345688899999999999999998877777889999999999999964 2234567778889999999999
Q ss_pred EEEEEeccCCCCC---CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC
Q 002208 462 LAVARQEVPERTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 538 (953)
Q Consensus 462 L~vA~~~~~~~~~---~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 538 (953)
+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998754321 12478999999999999999999999999999999999999999999999999999952 3
Q ss_pred ccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhh
Q 002208 539 ASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 618 (953)
Q Consensus 539 ~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~ 618 (953)
.++.|.+.+ .++++++++.+++.++|||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 466666554 7889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHhhhhchhccccC
Q 002208 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 697 (953)
Q Consensus 619 aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~~~~~~~l~~d 697 (953)
+||+||++|+|++|+.++++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988888777766666 6999999999999999778999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002208 698 RVKPSP--LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFV 775 (953)
Q Consensus 698 ~~~~~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 775 (953)
+++++. +|.+|+...+...+++.|++.+++++..|++++.. ++... .......++..|+.+++++.+++|+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 999874 67889888888888888999888887776665421 11100 0001234556799999999999999
Q ss_pred hccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccccch--HhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002208 776 TRSRS-WSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVG--WGWAGVIWLYSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 776 ~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 849 (953)
+|+++ ++|..+|.+..+++.++.+++..++++..-.+++++.+++ +..|+++++++.. +..++.|....+.+
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 99987 4444444444444444444433333211112345566666 4444443333333 56788777644433
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-131 Score=1225.81 Aligned_cols=817 Identities=25% Similarity=0.417 Sum_probs=678.5
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----
Q 002208 16 VDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANG---- 90 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~---- 90 (953)
...|..+.+|+++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|+.++|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3567889999999999999999999999999999999999766 56889999999999999999999999987421
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC------CeEEEEEccCcCCCcEEEEcCCC
Q 002208 91 EGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD------GKWSEEEAAILVPGDIISIKLGD 164 (953)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------G~~~~i~~~~Lv~GDiV~l~~Gd 164 (953)
.+...+|.++++|++++++|+.++++||++++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 123358999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred cccccEEEEecCCeEEeecCCCCCCeeEecCC-----------------------CCcccccceeeeceEEEEEEEecch
Q 002208 165 IIPADARLLEGDPLKVDQSALTGESLPVTKNP-----------------------GDEVFSGSTCKQGEIEAVVIATGVH 221 (953)
Q Consensus 165 ~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~-----------------------g~~v~~Gs~v~~G~~~~vVi~tG~~ 221 (953)
+|||||+|++|+++.||||+|||||.||.|.+ +|++|+||.|.+|++.++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999889999999999999999985 3689999999999999999999999
Q ss_pred hHHHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHH
Q 002208 222 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301 (953)
Q Consensus 222 T~~gki~~l~~~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~ 301 (953)
|++||+++++.+.+.++++|+.++++++++..+..+++.+.++ .......+|.+++..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~-~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL-INGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999876677899999999887654332222222111 222234678889999999999999999999999999
Q ss_pred HHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccC--cCCChHH
Q 002208 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRT--ENQDAID 379 (953)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~ 379 (953)
+.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ..+||+|
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 9999999999999999999999999999999999999999999988652 2234456677776654332 2469999
Q ss_pred HHHHHhcCChh--hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc----------cHHHHHHH
Q 002208 380 AAIVGMLADPK--EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKV 447 (953)
Q Consensus 380 ~ai~~~~~~~~--~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~ 447 (953)
.|++.++.... .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 99998875321 1234678899999999999999999877888899999999999999963 23345677
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCC-----CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTK-----ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~-----~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA 522 (953)
.+..++++++|+|++++||++++..+. +..|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 888899999999999999998765321 235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhh
Q 002208 523 KETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 602 (953)
Q Consensus 523 ~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~ 602 (953)
.+||+++||.. ..++.|.+.+ .++++++.+.+++.++|||++|+||+++|+.||++|++|+|||||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999963 3456666554 788899999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHH
Q 002208 603 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWK-FDFSPFMVL 681 (953)
Q Consensus 603 AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il 681 (953)
||||||||+|+|+||++||+||++|+|++|+.++++||++|+||+||+.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988777666555555 789999999
Q ss_pred HHHHhhhhchhccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHH
Q 002208 682 IIAILNDGTIMTISKDRVKPSP--LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMA 759 (953)
Q Consensus 682 ~i~l~~~~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t 759 (953)
|+|+++|.+.+++++|+++++. +|++|+.+.+-..++..|++.+++++..|++.+.. +. .+. . ......++
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t 808 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQS 808 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHH
Confidence 9999999878999999998775 78888766555555567777777777665543211 00 010 0 00012457
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCcccCh-hHHHHHHHHHHHHHHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHH
Q 002208 760 ALYLQVSIVSQALIFVTRSRSWSYLERP-GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPL 838 (953)
Q Consensus 760 ~~~~~~~~~~~~~~~~~rs~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (953)
..|+.+++++.+++|++|+++.++++++ .+..+++.++.+++.+++++..--.++++.++++.+|++++.++++++++.
T Consensus 809 ~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 809 GWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999874444444 333333333333333333220001244677788887777788888888888
Q ss_pred HHHHHHhHHh
Q 002208 839 DVMKFAIRYI 848 (953)
Q Consensus 839 ~~~K~~~r~~ 848 (953)
++.|.+.++.
T Consensus 889 e~~k~~~~r~ 898 (903)
T PRK15122 889 QGMKRFYIRR 898 (903)
T ss_pred HHHHHHHhhh
Confidence 8888654443
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-132 Score=1235.50 Aligned_cols=782 Identities=32% Similarity=0.504 Sum_probs=665.1
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 002208 14 ETVDLERIPIE--EVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEK-KESKILKFLGFMWNPLSWVMEAAAVMAIALAN 89 (953)
Q Consensus 14 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~ 89 (953)
....+|..+.+ ++...+.++ .+||+++|+.+|+++||+|++++. +.+.|.+|+.+|++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34577788788 899999887 679999999999999999999965 5788999999999999999999999999986
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCc
Q 002208 90 GEGKPPDW----QDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDI 165 (953)
Q Consensus 90 ~~~~~~~~----~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~ 165 (953)
.| .++..|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEecCCeEEeecCCCCCCeeEecCC--------------CCcccccceeeeceEEEEEEEecchhHHHHHHHhh
Q 002208 166 IPADARLLEGDPLKVDQSALTGESLPVTKNP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (953)
Q Consensus 166 IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~ 231 (953)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.|+|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhh
Q 002208 232 DST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (953)
Q Consensus 232 ~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~ 310 (953)
... ...+|+|+.+++++.++..+.+++.++.+++.+...+.+|...+..++++++++||++||+.++++++.|+.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988665555444443333333223448899999999999999999999999999999999999
Q ss_pred CCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCC---------hHHHHHHHHHhccC--c------
Q 002208 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVE---------KDHVMLLAARASRT--E------ 373 (953)
Q Consensus 311 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~---------~~~~l~~a~~~~~~--~------ 373 (953)
+++++|+++++|+||++|+||||||||||+|+|+|.+++...-....+ ...++..++.|+.. .
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999988642011122 01244545555532 2
Q ss_pred CCChHHHHHHHhcC------ChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc-------c
Q 002208 374 NQDAIDAAIVGMLA------DPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA-------K 440 (953)
Q Consensus 374 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 440 (953)
.+||+|.|++..+. +.......+++++++||||+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 35999999999875 3344556667899999999999999999977788999999999999999974 4
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC----CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcC
Q 002208 441 EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK----ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (953)
Q Consensus 441 ~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~----~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTG 516 (953)
++.++.+++..++|+++|||+|++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667889999999999999999999998766543 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccC
Q 002208 517 DQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVND 596 (953)
Q Consensus 517 D~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND 596 (953)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||++|+||.++|+.||++|++|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999997654333366666555 677889999999999999999999999999999999999999999999
Q ss_pred HHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc-C
Q 002208 597 APALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALI-WK-F 673 (953)
Q Consensus 597 ~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-~~-~ 673 (953)
+||||+|||||||| +|+|+||+|||+++++++|.+|+.+|+|||++|+|++|++.|.+++|+..++.++++.++ .+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999997 899999999999999999999999999999999999999999999999877766665544 44 6
Q ss_pred CccHHHHHHHHHhhhhc-hhccccCCCC------CCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 002208 674 DFSPFMVLIIAILNDGT-IMTISKDRVK------PSPLPDS--WKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDK 744 (953)
Q Consensus 674 ~~~~~~il~i~l~~~~~-~~~l~~d~~~------~~~~p~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 744 (953)
||+|+|++|+|+++|++ +++++.++++ |+++|.+ |+.+.++.+.+..|...+++.++.|.+.+... ....
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~-~~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGF-IANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Confidence 89999999999999997 5888877532 2234555 66666777677778888888777766655321 1111
Q ss_pred cCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccC---hhHHHHHHHHHHHHHHHHHHH
Q 002208 745 FGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLER---PGLLLVTAFVIAQLVATLIAV 807 (953)
Q Consensus 745 ~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~ 807 (953)
.+... .....++++|+.++++++++.+..|+.+.+|++. +++.++.++++..++..++.+
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~ 872 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIF 872 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 11100 1566789999999999999999999987665554 466777666666665554433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-130 Score=1217.25 Aligned_cols=810 Identities=25% Similarity=0.397 Sum_probs=672.1
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 002208 16 VDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKP 94 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~ 94 (953)
.+.|..+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|++++++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 3567889999999999999999999999999999999998876 568899999999999999999999999875
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEE------CCeEEEEEccCcCCCcEEEEcCCCcccc
Q 002208 95 PDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLR------DGKWSEEEAAILVPGDIISIKLGDIIPA 168 (953)
Q Consensus 95 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R------dG~~~~i~~~~Lv~GDiV~l~~Gd~IPa 168 (953)
+|.++++|++++++|+.+++++|+|++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cEEEEecCCeEEeecCCCCCCeeEecCCCC-------------cccccceeeeceEEEEEEEecchhHHHHHHHhhhccC
Q 002208 169 DARLLEGDPLKVDQSALTGESLPVTKNPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 235 (953)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~ 235 (953)
||+|++|+++.||||+|||||.|+.|.+|+ ++|+||.|.+|+++++|++||.+|++||+++++.+.+
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988999999999999999999874 6999999999999999999999999999999998866
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccc
Q 002208 236 QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (953)
Q Consensus 236 ~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilv 315 (953)
+++|+|+.++++++++..++++.+.+.++ .+.+...+|.+++..++++++++|||+||++++++++.|+++|+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 77899999999998765544432322222 22233457888999999999999999999999999999999999999999
Q ss_pred cchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCc--CCChHHHHHHHhcCCh--hh
Q 002208 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTE--NQDAIDAAIVGMLADP--KE 391 (953)
Q Consensus 316 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 391 (953)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++..+ .+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999988641 22445667777776654432 3599999999877532 22
Q ss_pred hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeE
Q 002208 392 ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRS 461 (953)
Q Consensus 392 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~ 461 (953)
.+..++.++.+||||++|+|++++.+.++.++.++|||||.++++|+. +++.++++++.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678899999999999999998876666789999999999999963 2344567888899999999999
Q ss_pred EEEEEeccCCCCC---CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC
Q 002208 462 LAVARQEVPERTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 538 (953)
Q Consensus 462 L~vA~~~~~~~~~---~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 538 (953)
+++||++++.++. +..|++|+|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765432 12478999999999999999999999999999999999999999999999999999963 2
Q ss_pred ccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhh
Q 002208 539 ASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 618 (953)
Q Consensus 539 ~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~ 618 (953)
.++.|.+.+ .++++++.+.+++.++|||++|+||+++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 455665544 6788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHhhhhchhccccC
Q 002208 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 697 (953)
Q Consensus 619 aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~~~~~~~l~~d 697 (953)
+||+||++|+|++|+.++++||++|+||++++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|.+.+++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999988887776666555 7999999999999999778999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002208 698 RVKPSP--LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFV 775 (953)
Q Consensus 698 ~~~~~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 775 (953)
+++++. +|.+|+.+.+...+++.|++.+++++..|++++.... .... ......++..|+.+++++.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 998873 5666877777777778899888877766655432110 0000 012235688899999999999999
Q ss_pred hccCCCCcccCh-hHHHHHHHHHHHHHHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 002208 776 TRSRSWSYLERP-GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYI 848 (953)
Q Consensus 776 ~rs~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~ 848 (953)
+|+++..+++++ .+..+++.++.+++.+.++..+--.++++.++++.|+.+++++.+.+.++.|+.|.+..+.
T Consensus 790 ~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 790 IRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQLVKTFYIRR 863 (867)
T ss_pred hCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999874444444 3232233333333222222110012345565543322222222333336678888764443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-126 Score=1196.77 Aligned_cols=832 Identities=23% Similarity=0.371 Sum_probs=679.9
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-
Q 002208 14 ETVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANG- 90 (953)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~- 90 (953)
...|+|..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++++++++++++....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 45799999999999999998 6699999999999999999998754 66889999999999999999999998875311
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCc
Q 002208 91 -----EGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDI 165 (953)
Q Consensus 91 -----~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~ 165 (953)
.....+|.++++|++++++|++++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEecCCeEEeecCCCCCCeeEecCCCC----------cccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-
Q 002208 166 IPADARLLEGDPLKVDQSALTGESLPVTKNPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (953)
Q Consensus 166 IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~----------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~- 234 (953)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++||+++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988999999999999999998874 799999999999999999999999999999998765
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCcc
Q 002208 235 NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (953)
Q Consensus 235 ~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~il 314 (953)
.+++|+|+.++++++++...++++.++.+ +.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 46799999999998876544433222222 22233456788888999999999999999999999999999999999999
Q ss_pred ccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehh--c-cC--------CCh-----HHHHHHHHHhccC------
Q 002208 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--A-KG--------VEK-----DHVMLLAARASRT------ 372 (953)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~--~-~~--------~~~-----~~~l~~a~~~~~~------ 372 (953)
+|+++++|+||++++||||||||||+|+|+|.++++... . .+ .+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 999999999999999999999999999999998764210 0 00 111 2355555555421
Q ss_pred ---------cCCChHHHHHHHhcC----ChhhhhcCcceEEeecCCCCCceEEEEEEcC---CCcEEEEEeCcHHHHHHH
Q 002208 373 ---------ENQDAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKRTALTYIDS---DGHWHRASKGAPEQILAL 436 (953)
Q Consensus 373 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa~e~il~~ 436 (953)
..+||+|.|++.++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998763 3344567789999999999999999887632 246789999999999999
Q ss_pred hhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-----------CCCCCCcEEEEEeecCCCCCC
Q 002208 437 CNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-----------ESPGGPWQFVGLLPLFDPPRH 495 (953)
Q Consensus 437 ~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~llG~i~i~D~lR~ 495 (953)
|+. +++.++.+++.+++|+++|+||+++||+++++++. +..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23456778889999999999999999998864321 123789999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------CccccCcccccccCch
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SASLLGQDKDASIAAL 553 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~~~~~~~~~~~~ 553 (953)
|++++|++|+++||+|+|+|||++.||.++|+++|+..+... ..++.|.+.+ .++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~-~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK-DMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh-hCCHH
Confidence 999999999999999999999999999999999999643210 1244554443 56777
Q ss_pred hHHHHHHhcC--cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCch
Q 002208 554 PVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 554 ~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~ 630 (953)
++++.+++.. ||||++|+||+++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||++|++|+|+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888765 99999999999999999999999999999999999999999999999 79999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCC
Q 002208 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLP 705 (953)
Q Consensus 631 ~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p 705 (953)
+|+.++++||++|+|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|++ ++++++|++.+. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999887777666554 45689999999999999986 699999887764 233
Q ss_pred Cccc-----hHHHH-HHHHHHHHHHHHHHHHHHHHHHh-hccCCC-ccCc---------cccCCC-------------HH
Q 002208 706 DSWK-----LKEIF-ATGVVLGGYLALMTVIFFWAMHE-TDFFPD-KFGV---------RAIRDS-------------EH 755 (953)
Q Consensus 706 ~~~~-----~~~~~-~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 755 (953)
.+++ .+..+ .+.+..|+++++..+++|++.+. .+|... .++. .+.... ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3332 12233 33455698999888877665442 121110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCcc--cChhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchHhHHHHHHHHH
Q 002208 756 EMMAALYLQVSIVSQALIFVTRSRSWSYL--ERPGLLLVTAFVIAQLVATLIAVYAN--WGFARIKGVGWGWAGVIWLYS 831 (953)
Q Consensus 756 ~~~t~~~~~~~~~~~~~~~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 831 (953)
+.+|++|..+++++.++++++|+.+.+++ ..+|++++.++++.+++..++ .|.+ -.++++.+++|.+|+.+++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 46899999999999999999999764422 245567777776666555444 4433 245567788888888888888
Q ss_pred HHHHHHHHHHHHHhHHh
Q 002208 832 IVFYVPLDVMKFAIRYI 848 (953)
Q Consensus 832 ~~~~~~~~~~K~~~r~~ 848 (953)
++.++..++.|++.|++
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 88888899999887764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-125 Score=1175.21 Aligned_cols=800 Identities=27% Similarity=0.406 Sum_probs=675.3
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCcccccc-cchHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 002208 16 VDLERIPIEEVFEQLKCT-REGLS-STEGANRLQIFGPNKLEEKK-ESKILKFLGFM-WNPLSWVMEAAAVMAIALANGE 91 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~il~~~ail~~~l~~~~ 91 (953)
-+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 378999999999999998 56999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEE
Q 002208 92 GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADAR 171 (953)
Q Consensus 92 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 171 (953)
+|.+++.|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEeecCCCCCCeeEecCCCC--------------cccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CC
Q 002208 172 LLEGDPLKVDQSALTGESLPVTKNPGD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 236 (953)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~K~~g~--------------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~ 236 (953)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. ..
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987999999999999999999874 799999999999999999999999999999999876 46
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCcccc
Q 002208 237 VGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (953)
Q Consensus 237 ~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk 316 (953)
++|+|+.++++++++....++.+++.+++.| ..+.++.+++..++++++++|||+||++++++++.++++|+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999998765443332222233333 345678889999999999999999999999999999999999999999
Q ss_pred chhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh-hc---cC--C-------------------ChHHHHHHHHHhcc
Q 002208 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV-FA---KG--V-------------------EKDHVMLLAARASR 371 (953)
Q Consensus 317 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~---~~--~-------------------~~~~~l~~a~~~~~ 371 (953)
+++++|+||++|+||||||||||+|+|+|.+++... .. .+ + ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999999876421 00 00 0 01234555555443
Q ss_pred Cc--------CCChHHHHHHHhcCCh--hhhhcCcceEEeecCCCCCceEEEEEEcC-CCcEEEEEeCcHHHHHHHhhc-
Q 002208 372 TE--------NQDAIDAAIVGMLADP--KEARAGIREVHFFPFNPVDKRTALTYIDS-DGHWHRASKGAPEQILALCNA- 439 (953)
Q Consensus 372 ~~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~- 439 (953)
.. .+||+|.|++.++... +..+..++.++.+||+|.+|||+++++.. +++++.++|||||.|+.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 2479999999876422 22345688899999999999999988753 567889999999999999963
Q ss_pred ----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCC
Q 002208 440 ----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV 509 (953)
Q Consensus 440 ----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI 509 (953)
+++.++++++.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++|+++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456788889999999999999999975 45799999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEE
Q 002208 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 589 (953)
Q Consensus 510 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~ 589 (953)
+++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+++..+|||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997542 2345555443 67888999999999999999999999999999999999999
Q ss_pred EcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 590 TGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 668 (953)
Q Consensus 590 ~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 668 (953)
+|||+||+|||++|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+||++++.|.++.|+..++.+++..
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999998 7999999999999999999999999999999999999999999999998766655443
Q ss_pred -HhhcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002208 669 -LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLPDSWK----LKEIFATGVVLGGYLALMTVIFFWAMHETD 739 (953)
Q Consensus 669 -~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p~~~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 739 (953)
+..+.|++|+|++|+|+++|++ ++++++|++++. ++|.+++ .+..+...+++|+++++++++.|+..+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 4466799999999999999988 489999887654 2333332 34566677788999888877666643310
Q ss_pred cCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002208 740 FFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE---RPGLLLVTAFVIAQLVATLIAVYAN--WGFA 814 (953)
Q Consensus 740 ~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 814 (953)
+ ....+.+|++|..+++++.++.|++|+++.++++ ..|++++.++++..++..++ +|.+ -.++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1 0234567999999999999999999997755433 23457777766666554444 4432 2345
Q ss_pred ccccchHhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002208 815 RIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847 (953)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~ 847 (953)
++.+++|..|+.+++++++.+++.++.|++.|+
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677888988888888999999999999988764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-125 Score=1180.49 Aligned_cols=814 Identities=22% Similarity=0.344 Sum_probs=665.7
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccccccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhc------CC
Q 002208 22 PIEEVFEQLKCT-REGLS--STEGANRLQIFGPNKLEEKKE-SKILKFLGFMWNPLSWVMEAAAVMAIALAN------GE 91 (953)
Q Consensus 22 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~~ail~~~l~~------~~ 91 (953)
..++++++|+++ ++||| ++||++|+++||+|+++.++. ++|+.|+++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999 56999 999999999999999998865 678899999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcC-CCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccE
Q 002208 92 GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAG-LAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADA 170 (953)
Q Consensus 92 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~-~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~ 170 (953)
+...+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 578999999999999999999999999999999999999
Q ss_pred EEEecCCeEEeecCCCCCCeeEecCCCCc--ccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCCcHHHHHHHHH
Q 002208 171 RLLEGDPLKVDQSALTGESLPVTKNPGDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 248 (953)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~K~~g~~--v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~~lq~~~~~i~ 248 (953)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|++||+++++..+++++++|+.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998875 9999999999999999999999999999999987767789999999988
Q ss_pred HHHHHHHHHHHHHHHHHH---Hhcc---c---------cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCc
Q 002208 249 NFCICSIAVGMLVEIIVM---YPIQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (953)
Q Consensus 249 ~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~i 313 (953)
+++...+++..++.++++ +... + .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 775433222121111111 1111 1 246677888999999999999999999999999999999999
Q ss_pred cccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehh--c-cC----CC--hHHHHHHHHH-hccCc----------
Q 002208 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--A-KG----VE--KDHVMLLAAR-ASRTE---------- 373 (953)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~--~-~~----~~--~~~~l~~a~~-~~~~~---------- 373 (953)
++|+++++|+||++|+||||||||||+|+|+|.+++.... . .+ .+ ..+++..++. ++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999998764211 0 00 00 1122332322 22211
Q ss_pred -CCChHHHHHHHhcC----ChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhcc--------
Q 002208 374 -NQDAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-------- 440 (953)
Q Consensus 374 -~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 440 (953)
.+||+|.|++.++. +..+.+..++.++.+||+|++|||+++++..+++++.++|||||.|+++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998764 33334456778889999999999999998777778999999999999999641
Q ss_pred --HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC---CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEc
Q 002208 441 --EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (953)
Q Consensus 441 --~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~---~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miT 515 (953)
++.++++++.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235678888999999999999999999864332 33478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCcc
Q 002208 516 GDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 595 (953)
Q Consensus 516 GD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~N 595 (953)
||++.||.++|++|||.++. ..++.|.+.+ .++++++++.+++.++|||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997532 2455665544 67788999999999999999999999999999999999999999999
Q ss_pred CHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 002208 596 DAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI-ALIWKF 673 (953)
Q Consensus 596 D~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~ 673 (953)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+||++++.|.+++|+..++..++. .++.++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766655554 444677
Q ss_pred CccHHHHHHHHHhhhhc-hhccccCCCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 002208 674 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLPDSWK----LKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKF 745 (953)
Q Consensus 674 ~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p~~~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 745 (953)
|++|+|++|+|+++|++ ++++++|++.+. .+|.+|+ .+.++...+..|+++++++++.+++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999986 699999987664 2444433 3456666788899999888877665431 1110 0
Q ss_pred Cccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC--Cc---ccChhHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 002208 746 GVRA-IRDSEHEMMAALYLQVSIVSQALIFVTRSRSW--SY---LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGV 819 (953)
Q Consensus 746 g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~--~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (953)
+... ........+|++|.++++++.++.+++|+.+. +| ++| ++++.++++..++..++..++ -.++++.++
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n--~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l 913 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKN--RIFVTIMGFTFGFQVIIVEFG-GSFFSTVSL 913 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCccccccccccc--HHHHHHHHHHHHHHHHHHHHH-HHHhcccCC
Confidence 1000 00123457899999999999999999999653 22 334 356655555555543443332 234567788
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHH
Q 002208 820 GWGWAGVIWLYSIVFYVPLDVMKFA 844 (953)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~K~~ 844 (953)
+|..|+.+++++++.+++.++.|++
T Consensus 914 ~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 914 SIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888788888888888888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-124 Score=1062.44 Aligned_cols=812 Identities=22% Similarity=0.333 Sum_probs=647.3
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCcccccccc-hHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCCCCc
Q 002208 22 PIEEVFEQLKCT-REGLSS--TEGANRLQIFGPNKLEEKKES-KILKFLGFMWNPLSWVMEAAAVMAIALANG-EGKPPD 96 (953)
Q Consensus 22 ~~~~~~~~l~~~-~~GLt~--~e~~~r~~~~G~N~i~~~~~~-~~~~~l~~~~~~~~~il~~~ail~~~l~~~-~~~~~~ 96 (953)
-.+.+++.|+|+ .+||+. +|.++|++.||.|.+|+++++ +|+..++.+.+.-..+|.++|++|+.++.. .+....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378999999999 569987 899999999999999998854 556668888888889999999999998754 344679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc-CCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 97 WQDFVGIVCLLVINSTISFIEENNAGNAAAALMA-GLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 97 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~-~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
|++++.|++.+++..++..+.+|+.++....|++ ....+..|+|||+.++|+..|||||||+.|+.||.+||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999999887766656666666666666665553 345678999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCCCeeEecCC--CCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHH-
Q 002208 176 DPLKVDQSALTGESLPVTKNP--GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC- 251 (953)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~K~~--g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~- 251 (953)
+++.||||+|||||.++.|.+ +.++++||++.+|.+.++|+++|.+|+.|++..++.... +++|+|-.+++++..+
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 347899999999999999999999999999999888775 8999999988876542
Q ss_pred --HHHHHHHHHHHHHHHHhcc-----cc---ch--------HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCc
Q 002208 252 --ICSIAVGMLVEIIVMYPIQ-----HR---KY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (953)
Q Consensus 252 --~~~i~~~~~~~~~~~~~~~-----~~---~~--------~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~i 313 (953)
.+.++...++.++..|+.. +. .+ ...+...+.++++++|+|||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1222222222233334321 11 11 122334455678899999999999999999999999999
Q ss_pred cccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhcc--------CCChHH--HHHHH-HHhcc-----------
Q 002208 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAK--------GVEKDH--VMLLA-ARASR----------- 371 (953)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~--------~~~~~~--~l~~a-~~~~~----------- 371 (953)
+||+++|+|+||+.++||+|||||||+|+|+|.+.++..... ..++.- ++..+ +.++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 999999999999999999999999999999999977632111 122211 11111 11111
Q ss_pred --CcCCChHHHHHHHhc----CChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc------
Q 002208 372 --TENQDAIDAAIVGML----ADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA------ 439 (953)
Q Consensus 372 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 439 (953)
...++|++.|++++. .|.++.+...+.++++||||++|+|+++++.++|..+.++|||.|.|+..|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 012479999998875 46667788889999999999999999999988877349999999999999974
Q ss_pred -----cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCC-------C-CCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHh
Q 002208 440 -----KEDLKKKVHAIIDKYAERGLRSLAVARQEVPER-------T-KESPGGPWQFVGLLPLFDPPRHDSAETIRRALN 506 (953)
Q Consensus 440 -----~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~-------~-~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~ 506 (953)
+++.+..+++.++.||++|+|++|+||++..+. + .+..+.+|+++|+++|+||.|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566899999999999999999999984332 1 246688999999999999999999999999999
Q ss_pred cCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCE
Q 002208 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHI 586 (953)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~ 586 (953)
|||+|.|+||||..||++||.+|||.++......+.|.+.. .+++++.++++.+.+|+||.+|.||+-+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998875554566666554 88999999999999999999999999999999999999
Q ss_pred EEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 002208 587 CGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI-VFGF 664 (953)
Q Consensus 587 V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~-~~~~ 664 (953)
||+||||.||+||||+||||.||| .||++||++|||+|+||||++|+.+++|||.+|+||+||++|+++.|+.. ++.|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999854 4445
Q ss_pred HHHHHhhcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---C----CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 665 MFIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMH 736 (953)
Q Consensus 665 ~~~~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~----~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 736 (953)
..+...-..|++++|+||+|+++|.+ ++++++|++.+. + +..+...+.+|...+.+++|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 54555556899999999999999988 699999998653 2 233444566788889999999888876555432
Q ss_pred hhccCCCccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCC--CC---cccChhHHHHHHHHHHHHHHHHHHHhhc
Q 002208 737 ETDFFPDKFGVRA-IRDSEHEMMAALYLQVSIVSQALIFVTRSRS--WS---YLERPGLLLVTAFVIAQLVATLIAVYAN 810 (953)
Q Consensus 737 ~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~--~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 810 (953)
. .| +... .+....+..|++|-++++++.++-|+.|.-. -. .++|+ ++++++...++..++.+...
T Consensus 901 ~--if----~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--IF----GLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--hh----ccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 22 1111 1112445669999999999999999999865 11 22333 33333333333333334333
Q ss_pred ccccccccchHhHHHHHHHHHHHHHHHHHHHHH
Q 002208 811 WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843 (953)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~ 843 (953)
..++...+++|..|++++++.+..+..-.+.|.
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~ 1004 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKC 1004 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHhee
Confidence 445678888888777766666555544444443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-116 Score=1097.20 Aligned_cols=779 Identities=27% Similarity=0.368 Sum_probs=626.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC
Q 002208 65 FLGFMWNPLSWVMEAAAVMAIALANG---EGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD 141 (953)
Q Consensus 65 ~l~~~~~~~~~il~~~ail~~~l~~~---~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 141 (953)
+++||++|++++|+++++++++++.. .....+|.++++|++++++|+.++++||+++++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999998532 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC-------------Ccccccceeee
Q 002208 142 GKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG-------------DEVFSGSTCKQ 208 (953)
Q Consensus 142 G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g-------------~~v~~Gs~v~~ 208 (953)
|++++|+++||||||+|.|++||.|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.|.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998899999999999999999876 78999999999
Q ss_pred ceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccch----HHHH
Q 002208 209 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPI-----QHRKY----RDGI 278 (953)
Q Consensus 209 G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 278 (953)
|++.++|++||.+|++||++++++.. .+++|+|+.+++++.++...+++.+++.+++.... ...+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998775443333222222221111 01122 2344
Q ss_pred HHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh------
Q 002208 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV------ 352 (953)
Q Consensus 279 ~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~------ 352 (953)
..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999876421
Q ss_pred -----hccCCC-------------------hHHHHHHHHHhccCc------------CCChHHHHHHHhcCChh------
Q 002208 353 -----FAKGVE-------------------KDHVMLLAARASRTE------------NQDAIDAAIVGMLADPK------ 390 (953)
Q Consensus 353 -----~~~~~~-------------------~~~~l~~a~~~~~~~------------~~~~~~~ai~~~~~~~~------ 390 (953)
...+++ .+.++..++.|+... .+||+|.|++.++.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000010 123444455554321 25899999987653210
Q ss_pred --------------hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc-----------cHHHHH
Q 002208 391 --------------EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA-----------KEDLKK 445 (953)
Q Consensus 391 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 445 (953)
..+..++.++.+||||++|||++++++ ++++++++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123557789999999999999999876 467889999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeccCCCC----------CCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEE
Q 002208 446 KVHAIIDKYAE-RGLRSLAVARQEVPERT----------KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 514 (953)
Q Consensus 446 ~~~~~~~~~a~-~GlR~L~vA~~~~~~~~----------~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~mi 514 (953)
++.+.+++|++ +|+|||++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 14468899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCC--CccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcC
Q 002208 515 TGDQLAIAKETGRRLGMGTNMYP--SASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGD 592 (953)
Q Consensus 515 TGD~~~tA~~ia~~lGi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GD 592 (953)
|||++.||.++|+++|+..+... ...+.|.+. ..+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 123444443 356677788888888999999999999999999999999999999
Q ss_pred CccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002208 593 GVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL-IW 671 (953)
Q Consensus 593 G~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~ 671 (953)
|+||+||||+||||||||+|++++|++||+++.+|+|++|++++++||++|+|+++++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777666544 45
Q ss_pred cCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC
Q 002208 672 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLPD----SWKLKEIFATGVVLGGYLALMTVIFFWAMHET-DFFP 742 (953)
Q Consensus 672 ~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p~----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~ 742 (953)
+.||+|+|++|+|+++|++ +++++++++++. .+|. +...++.+..++..|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999976 588999887654 1222 22234566677778999998877666544321 2111
Q ss_pred C--cc--Cccc---c----CCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHh
Q 002208 743 D--KF--GVRA---I----RDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE---RPGLLLVTAFVIAQLVATLIAVY 808 (953)
Q Consensus 743 ~--~~--g~~~---~----~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 808 (953)
. .. +..+ . .....+.+|++|.++++++.++.|++|+++.+++. .+|.+++.++++..++..++ +|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HH
Confidence 0 00 0000 0 00124567999999999999999999997654332 23446666666655554333 44
Q ss_pred hc--ccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhH
Q 002208 809 AN--WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846 (953)
Q Consensus 809 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 846 (953)
.+ -.++++.+++|..|+++++++++.++..++.|++.|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 234567888999998889999999999999998753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-117 Score=1011.24 Aligned_cols=841 Identities=24% Similarity=0.409 Sum_probs=695.9
Q ss_pred chhhhccc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 002208 7 SLEEIKNE-TVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVM 83 (953)
Q Consensus 7 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail 83 (953)
++++.++| .+|.|++|.+|+.++++++ .+|||.++|.+++++-|+|.+++++ .+.|.+|++|+++.+.+++++++++
T Consensus 27 ~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l 106 (1019)
T KOG0203|consen 27 ELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAIL 106 (1019)
T ss_pred hHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHH
Confidence 68888888 5999999999999999999 7899999999999999999998776 5679999999999999999999999
Q ss_pred HHHHhc-----CCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcE
Q 002208 84 AIALAN-----GEGKPPD-WQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDI 157 (953)
Q Consensus 84 ~~~l~~-----~~~~~~~-~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDi 157 (953)
+++.+. ......+ .+-++++..++++..+..|+||.+..+-+++.+++.|+.++|+|||+...+.+++|||||+
T Consensus 107 ~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~ 186 (1019)
T KOG0203|consen 107 CFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDL 186 (1019)
T ss_pred HHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccc
Confidence 998541 1111222 2334445556677788899999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC----------CcccccceeeeceEEEEEEEecchhHHHHH
Q 002208 158 ISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKA 227 (953)
Q Consensus 158 V~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g----------~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki 227 (953)
|.++-||+||||.|++++..+++|+|+|||||.|..+.+. |+.|.+|.+.+|.++++|++||.+|.+|++
T Consensus 187 v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~i 266 (1019)
T KOG0203|consen 187 VEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRI 266 (1019)
T ss_pred eeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeeh
Confidence 9999999999999999999999999999999999999873 688999999999999999999999999999
Q ss_pred HHhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 002208 228 AHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (953)
Q Consensus 228 ~~l~~~-~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~ 306 (953)
+.+... ...++++++.++++..+......+ +.+.++..-...++.|.+++.+.+.++++.+|++|+..++++++.-++
T Consensus 267 a~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltltak 345 (1019)
T KOG0203|consen 267 ASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAK 345 (1019)
T ss_pred hhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHH
Confidence 998765 467889999888887664322222 222223222233778888888899999999999999999999999999
Q ss_pred HHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhcc----------------CCChHHHHHHHHHhc
Q 002208 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAK----------------GVEKDHVMLLAARAS 370 (953)
Q Consensus 307 ~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~a~~~~ 370 (953)
||+++++++|++.++|+||+.++||+|||||||+|.|+|.+.+.+.... ...-..+...+..|+
T Consensus 346 rMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn 425 (1019)
T KOG0203|consen 346 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCN 425 (1019)
T ss_pred HHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999877531110 011124556666665
Q ss_pred cC---------------cCCChHHHHHHHhc----CChhhhhcCcceEEeecCCCCCceEEEEEEcCC---CcEEEEEeC
Q 002208 371 RT---------------ENQDAIDAAIVGML----ADPKEARAGIREVHFFPFNPVDKRTALTYIDSD---GHWHRASKG 428 (953)
Q Consensus 371 ~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~~~KG 428 (953)
+. ..+|+.+.|++++. ++.++.++..+.+..+||||.+|+.-.++...| .+..+..||
T Consensus 426 ~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKG 505 (1019)
T KOG0203|consen 426 RAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKG 505 (1019)
T ss_pred cceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecC
Confidence 42 23578899998875 455677888899999999999999888777544 577889999
Q ss_pred cHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-----------CCCCCCcEEEEEe
Q 002208 429 APEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-----------ESPGGPWQFVGLL 487 (953)
Q Consensus 429 a~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~llG~i 487 (953)
|||.++++|+. ++...+.+++...++...|-||++++++.++++++ .-...+|.|+|++
T Consensus 506 ape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~ 585 (1019)
T KOG0203|consen 506 APERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLI 585 (1019)
T ss_pred ChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchh
Confidence 99999999974 45667889999999999999999999999886542 2345689999999
Q ss_pred ecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC------------CC----------ccccCcc
Q 002208 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY------------PS----------ASLLGQD 545 (953)
Q Consensus 488 ~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~------------~~----------~~l~~~~ 545 (953)
++.||||..+|+++.+||.|||||+|+||||+.||+++|+++||..... +. .++.|.
T Consensus 586 s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~- 664 (1019)
T KOG0203|consen 586 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGS- 664 (1019)
T ss_pred hccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecc-
Confidence 9999999999999999999999999999999999999999999754211 00 112333
Q ss_pred cccccCchhHHHHHHhcC--cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCE
Q 002208 546 KDASIAALPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDI 622 (953)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDi 622 (953)
+...++.+++++++++.. ||||.||+||+.||+..|++|.+|+++|||+||+||||+|||||||| .|+|++|+|||+
T Consensus 665 eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADm 744 (1019)
T KOG0203|consen 665 ELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 744 (1019)
T ss_pred cccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcce
Confidence 334778889999998765 99999999999999999999999999999999999999999999999 999999999999
Q ss_pred eecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCccHHHHHHHHHhhhhc-hhccccCCCC
Q 002208 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVK 700 (953)
Q Consensus 623 vl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~ 700 (953)
+|+||||++|+..|++||-+|+|+||.+.|.+++|+..+..++++ ++..|+|+.++.+|.|.+.+|.. +++++||.++
T Consensus 745 ILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aE 824 (1019)
T KOG0203|consen 745 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAE 824 (1019)
T ss_pred EEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCch
Confidence 999999999999999999999999999999999999877766654 45588999999999999999987 5999999876
Q ss_pred CC---CCC-----CccchHHHHHHH-HHHHHHHHHHHHHHHHH-HHhhccCCCcc----------CccccCCCH------
Q 002208 701 PS---PLP-----DSWKLKEIFATG-VVLGGYLALMTVIFFWA-MHETDFFPDKF----------GVRAIRDSE------ 754 (953)
Q Consensus 701 ~~---~~p-----~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~-~~~~~~~~~~~----------g~~~~~~~~------ 754 (953)
.. ++| ++.-..+++.++ +..|+++++..|+.|+. +...+|++... +++++.+++
T Consensus 825 sDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWty 904 (1019)
T KOG0203|consen 825 SDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTY 904 (1019)
T ss_pred hhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccH
Confidence 43 122 233334555543 66699999999977665 44556665321 122222222
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhhhccCCCCc--ccChhHHHHHHHHHHHHHHHHHHHhhc-ccccccccchHhHH
Q 002208 755 -------HEMMAALYLQVSIVSQALIFVTRSRSWSY--LERPGLLLVTAFVIAQLVATLIAVYAN-WGFARIKGVGWGWA 824 (953)
Q Consensus 755 -------~~~~t~~~~~~~~~~~~~~~~~rs~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 824 (953)
.+.+|+.|.++++.|.+..+.+.+++-+. ....||.+++++++-.+++.++++-.. ...+++.++.|.||
T Consensus 905 eqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~w 984 (1019)
T KOG0203|consen 905 EQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWW 984 (1019)
T ss_pred HHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEE
Confidence 13568888999999999888888777554 345688999999888888777654332 22346888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhc
Q 002208 825 GVIWLYSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 825 ~~~~~~~~~~~~~~~~~K~~~r~~~ 849 (953)
++.+.++++.++.+|+.|+++|++.
T Consensus 985 l~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 985 LVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred EecccceeeeeeHHHHHhHhhhhCC
Confidence 9999999999999999999999886
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-112 Score=1075.06 Aligned_cols=751 Identities=22% Similarity=0.270 Sum_probs=592.4
Q ss_pred CCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002208 34 REGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTI 113 (953)
Q Consensus 34 ~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i 113 (953)
.+|||++|+++|+++||+|+++.+++++|..|++++++|+++++++++++ |++. .+|.+++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888899999999999998777666555 4433 3789999999999999999
Q ss_pred HHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEc--CCCcccccEEEEecCCeEEeecCCCCCCee
Q 002208 114 SFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIK--LGDIIPADARLLEGDPLKVDQSALTGESLP 191 (953)
Q Consensus 114 ~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~--~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~p 191 (953)
++++++++.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +||+|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888644 578999999999999999999999999999 99999999999999 699999999999999
Q ss_pred EecCCC------------------Ccccccceeee-------ceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHH
Q 002208 192 VTKNPG------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLT 245 (953)
Q Consensus 192 v~K~~g------------------~~v~~Gs~v~~-------G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~ 245 (953)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999862 25999999986 78999999999999999999988665 45678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhc
Q 002208 246 AIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (953)
Q Consensus 246 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg 325 (953)
++..+++++.+++.+. .++.+...+.++...+..++.+++++||++||++++++++.|+.||+|+|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543332221211 122222235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCCCCCceEEEEeeeehhccC----------CChHHHHHHHHHhccC------cCCChHHHHHHHhcCCh
Q 002208 326 GMDVLCSDKTGTLTLNKLSVDKNLIEVFAKG----------VEKDHVMLLAARASRT------ENQDAIDAAIVGMLADP 389 (953)
Q Consensus 326 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~ 389 (953)
++|++|||||||||+|+|+|.+......... .....+....+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998754211000 0112222333333221 23699999999876311
Q ss_pred ----hhh---------------hcCcceEEeecCCCCCceEEEEEEcCC-CcEEEEEeCcHHHHHHHhhccHHHHHHHHH
Q 002208 390 ----KEA---------------RAGIREVHFFPFNPVDKRTALTYIDSD-GHWHRASKGAPEQILALCNAKEDLKKKVHA 449 (953)
Q Consensus 390 ----~~~---------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 449 (953)
.+. ...+++++.+||+|++||||++++..+ ++++.++|||||.|+++|+. +..++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 000 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEEeccCCC--------CCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH
Q 002208 450 IIDKYAERGLRSLAVARQEVPER--------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (953)
Q Consensus 450 ~~~~~a~~GlR~L~vA~~~~~~~--------~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t 521 (953)
.+++|+++|+||||+|||++++. ++++.|++|+|+|+++|+||+||+++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------------------------------------------ccccCccccc--
Q 002208 522 AKETGRRLGMGTNMYPS---------------------------------------------------ASLLGQDKDA-- 548 (953)
Q Consensus 522 A~~ia~~lGi~~~~~~~---------------------------------------------------~~l~~~~~~~-- 548 (953)
|.++|++|||.++.... .+++|.+.+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996432100 0111111110
Q ss_pred ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC
Q 002208 549 SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 549 ~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~ 628 (953)
.+.++++.+++++..||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1234567778888999999999999999999999999999999999999999999999999865 555 79999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CC
Q 002208 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PL 704 (953)
Q Consensus 629 ~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~ 704 (953)
|++|+.+|++||+++.|+++.+.|.+.+++..++.+++ ....+.+++++|++|++++.+.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999888866554433 23456889999999999999987 588888887653 22
Q ss_pred C-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 002208 705 P-DSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRA-IRDSEHEMMAALYLQVSIVSQALIFVTRSRSWS 782 (953)
Q Consensus 705 p-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~ 782 (953)
| .+...+..+...+.+++++.++.++.|++.....|+........ -........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 33333455666677788888887777776665545421111000 0011223467777 6667777777778876644
Q ss_pred c----ccChhHHHHHHHHHHHHH
Q 002208 783 Y----LERPGLLLVTAFVIAQLV 801 (953)
Q Consensus 783 ~----~~~~~~~l~~~~~~~~~~ 801 (953)
| ++|+ +++.+++++.++
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGL 1022 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHH
Confidence 3 3343 445444444333
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-102 Score=989.12 Aligned_cols=785 Identities=18% Similarity=0.232 Sum_probs=580.7
Q ss_pred cCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhH
Q 002208 49 FGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNA 124 (953)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~ 124 (953)
|..|.+...|++.| +.|++||.+|.+++|+++++++++... .....+...++++++++++++.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~--s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPIL--SPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCc--CCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999875 789999999999999999999998432 122234455567777778999999999999998
Q ss_pred HHHhhcCCCCeEEEEEC-CeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCC----eEEeecCCCCCCeeEecCCC--
Q 002208 125 AAALMAGLAPKTKLLRD-GKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKNPG-- 197 (953)
Q Consensus 125 ~~~l~~~~~~~~~V~Rd-G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----l~Vdes~LTGEs~pv~K~~g-- 197 (953)
.+++ +.++++|+|| |++++++|+||+|||+|.|++||.||||++|+++++ ++||||+|||||+|+.|++.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 4578999997 899999999999999999999999999999998654 99999999999999999641
Q ss_pred ----------------------------------------------Ccccccceeee-ceEEEEEEEecchhHHHHHHHh
Q 002208 198 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (953)
Q Consensus 198 ----------------------------------------------~~v~~Gs~v~~-G~~~~vVi~tG~~T~~gki~~l 230 (953)
|++|+||.+++ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46889999999 899999999999999876421
Q ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cch---------------HHHHHHHHHHHHhhccc
Q 002208 231 VDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQH----RKY---------------RDGIDNLLVLLIGGIPI 291 (953)
Q Consensus 231 ~~~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~ 291 (953)
....+.+++++.++++..+++++.++.+++..++...... ..| ...+..+++++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2234779999999999876554433323332222211111 011 12566788999999999
Q ss_pred chHHHHHHHHHHHH------HHHhhC----CccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccC-----
Q 002208 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKG----- 356 (953)
Q Consensus 292 aLp~~~~i~~~~~~------~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----- 356 (953)
+||+++++++++++ .+|.++ ++++|+++++|+||+|++||+|||||||+|+|+++++.+.....+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 599999999999999999999999999999999999875311000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccC-------c-------CCChH
Q 002208 357 --------V--------------------E----------------KDHVMLLAARASRT-------E-------NQDAI 378 (953)
Q Consensus 357 --------~--------------------~----------------~~~~l~~a~~~~~~-------~-------~~~~~ 378 (953)
. + ..+++..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01233333434321 1 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc-
Q 002208 379 DAAIVGMLADP---------K---------EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA- 439 (953)
Q Consensus 379 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 439 (953)
|.|++.++... + .....|++++.+||+|+|||||+++++++|++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999876321 1 0124588899999999999999999998888899999999999999985
Q ss_pred cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-------------------------CCCCCCcEEEEEeecCCCCC
Q 002208 440 KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-------------------------ESPGGPWQFVGLLPLFDPPR 494 (953)
Q Consensus 440 ~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lR 494 (953)
+++.++++.+++++|+++|+|||++|+|.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875421 34689999999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-----------------------------------
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA----------------------------------- 539 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~----------------------------------- 539 (953)
+|++++|+.|++|||+|||+|||+++||.+||++||+.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999976432110
Q ss_pred ----cccCcccccccCc---hhHHHHHHhcC--cEeecCHHHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 540 ----SLLGQDKDASIAA---LPVEELIEKAD--GFAGVFPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 540 ----~l~~~~~~~~~~~---~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
++.|...+..+++ ..+.+++..++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1222222111111 12334555555 99999999999999999998 99999999999999999999999998
Q ss_pred -cCchHHHhhccCEeecCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHHH
Q 002208 610 -ADATDAARGASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKF----DFSPFMVLII 683 (953)
Q Consensus 610 -g~~t~~a~~aaDivl~~~~~~~i~~ai-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~----~~~~~~il~i 683 (953)
|.....|+.+||+++.+ |..+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 43223466799999975 88999887 8999999999999999999999888888777665433 5788899999
Q ss_pred HHhhhhc-hhcccc-CCCCCC----CCCC--------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccc
Q 002208 684 AILNDGT-IMTISK-DRVKPS----PLPD--------SWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRA 749 (953)
Q Consensus 684 ~l~~~~~-~~~l~~-d~~~~~----~~p~--------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 749 (953)
|++.+.+ +++++. |+..+. ..|. .....+.|..+++.|++++++++++.++.+...... ..|
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g--- 947 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG--- 947 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC---
Confidence 9999887 477764 333211 1221 111233455566789999998886655554321111 112
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHH-HHhh-c---ccccccccchHhHH
Q 002208 750 IRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLI-AVYA-N---WGFARIKGVGWGWA 824 (953)
Q Consensus 750 ~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~---~~~~~~~~~~~~~~ 824 (953)
...+.....+++|+.+++..++.++ ..++.|+|..... +++++++ .++..++ ..+. . ++.......++.+|
T Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~wt~~~~~~--~~~S~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~ 1023 (1057)
T TIGR01652 948 SLDDFSSVGVIVFTALVVIVNLKIA-LEINRWNWISLIT--IWGSILV-WLIFVIVYSSIFPSPAFYKAAPRVMGTFGFW 1023 (1057)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHH-HHHhHhHHHHHHH--HHHHHHH-HHHHHHHHHhhcccccHHHHHHHHHccHHHH
Confidence 1123455667778777777766542 2333454432221 1122211 1111111 1010 0 00011111245566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhcC
Q 002208 825 GVIWLYSIVFYVPLDVMKFAIRYILS 850 (953)
Q Consensus 825 ~~~~~~~~~~~~~~~~~K~~~r~~~~ 850 (953)
+.+++..++.++|+.++|++.|.+.|
T Consensus 1024 l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 1024 LVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 67677888888999999998777764
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-98 Score=939.49 Aligned_cols=784 Identities=16% Similarity=0.169 Sum_probs=571.0
Q ss_pred HhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 002208 47 QIFGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAG 122 (953)
Q Consensus 47 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~ 122 (953)
.+|..|.+.+.||++| +.+++||..+.+++|+++++++++.. ......+...+++++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~--~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ--LAVFGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCC--cccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999875 67889999999999999999998843 22233556778888899999999999999999
Q ss_pred hHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC----CeEEeecCCCCCCeeEecCCC-
Q 002208 123 NAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD----PLKVDQSALTGESLPVTKNPG- 197 (953)
Q Consensus 123 ~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~~g- 197 (953)
++.++.+ +..++|+|+|++++++|++|+|||+|.|++||.||||++|++++ .++||||+|||||+|+.|.++
T Consensus 163 k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 9987753 56899999999999999999999999999999999999999843 389999999999999999752
Q ss_pred --------------------------------------------Ccccccceeeec-eEEEEEEEecchhHHHHHHHhhh
Q 002208 198 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (953)
Q Consensus 198 --------------------------------------------~~v~~Gs~v~~G-~~~~vVi~tG~~T~~gki~~l~~ 232 (953)
+.+++||.+++. .++|+|++||.+|+..+ +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 346677777776 49999999999998432 1111
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc-c---------------------ch-------HHHHHHH
Q 002208 233 STNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVM--YPIQH-R---------------------KY-------RDGIDNL 281 (953)
Q Consensus 233 ~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~~-~---------------------~~-------~~~~~~~ 281 (953)
...+.+++++.+|++..+++++.++.+++..++. |.... . ++ ...+...
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2247899999999988765443333222222221 11100 0 00 1112334
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHHHhhCC----------ccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeee
Q 002208 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE 351 (953)
Q Consensus 282 l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~----------ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 351 (953)
++++..+||++|++.+++++..++..+.++. +.+|+.+.+|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677799999999999999988898888765 789999999999999999999999999999999998763
Q ss_pred hhccC-----------------------------------------CC-h-----HHHHHHHHHhccC------------
Q 002208 352 VFAKG-----------------------------------------VE-K-----DHVMLLAARASRT------------ 372 (953)
Q Consensus 352 ~~~~~-----------------------------------------~~-~-----~~~l~~a~~~~~~------------ 372 (953)
....+ .+ + .+++...+.|+..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 00 0 1233333333321
Q ss_pred ------cCCChHHHHHHHhcCCh----------------hhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcH
Q 002208 373 ------ENQDAIDAAIVGMLADP----------------KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAP 430 (953)
Q Consensus 373 ------~~~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 430 (953)
...+|.|.|++.++.+. ...+..|++++.+||+|+|||||+++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 11379999999876421 22456789999999999999999999988888999999999
Q ss_pred HHHHHHhhcc--HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-------------------------CCCCCCcEE
Q 002208 431 EQILALCNAK--EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-------------------------ESPGGPWQF 483 (953)
Q Consensus 431 e~il~~~~~~--~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~l 483 (953)
+.|+++|+.. ++.++++++++++|+++|+|||++|||.++++++ +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3567788999999999999999999999975422 346899999
Q ss_pred EEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc----------------------
Q 002208 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL---------------------- 541 (953)
Q Consensus 484 lG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---------------------- 541 (953)
+|+++++||||++++++|++|+++||+|||+|||+.+||++||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997653211111
Q ss_pred -------------------------cCcccccccC---chhHHHHHHhcC--cEeecCHHHHHHHHHHhccc-CCEEEEE
Q 002208 542 -------------------------LGQDKDASIA---ALPVEELIEKAD--GFAGVFPEHKYEIVKKLQER-KHICGMT 590 (953)
Q Consensus 542 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~-g~~V~~~ 590 (953)
.|...+..++ .+.+.++..+++ ||||++|+||+++|+.+|+. +++|+|+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1111110011 123445555555 79999999999999999987 5899999
Q ss_pred cCCccCHHhhhhCCeeEEe-c-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 591 GDGVNDAPALKKADIGIAV-A-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 668 (953)
Q Consensus 591 GDG~ND~paLk~AdVGIam-g-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 668 (953)
|||+||+||||+|||||++ | +|.+|++ |||+++.++++..-+.++ |||+.|+|+.+.+.|.+++|+.+++..+++.
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 5666555 999999988876555444 9999999999999999999999999999988
Q ss_pred HhhcCC----ccHHHHHHHHHhhhhc-hhcc-ccCCCCCC----CCC---------CccchHHHHHHHHHHHHHHHHHHH
Q 002208 669 LIWKFD----FSPFMVLIIAILNDGT-IMTI-SKDRVKPS----PLP---------DSWKLKEIFATGVVLGGYLALMTV 729 (953)
Q Consensus 669 ~~~~~~----~~~~~il~i~l~~~~~-~~~l-~~d~~~~~----~~p---------~~~~~~~~~~~~~~~G~~~~~~~~ 729 (953)
++.+|. +.++.+.++|++...+ ++.+ .+|+.-+. ..| ..++ .+.|+.+++.|++++++.|
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n-~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN-SKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC-HHHHHHHHHHHHHHHHHHH
Confidence 887764 5567777777766655 4666 45554332 112 2233 3456666778999999988
Q ss_pred HHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhh
Q 002208 730 IFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYA 809 (953)
Q Consensus 730 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 809 (953)
++.++.+..... +. ....+++++.++++.++.++ ..+++|.|..... +++++++ .++..++..+.
T Consensus 1035 f~~~~~~~~~~~----~~-------~~~~~~~~~~~v~~vnl~i~-~~~~~wt~~~~~~--i~~Si~~-~~i~~~~~~~~ 1099 (1178)
T PLN03190 1035 FVPLFAYWASTI----DG-------SSIGDLWTLAVVILVNLHLA-MDIIRWNWITHAA--IWGSIVA-TFICVIVIDAI 1099 (1178)
T ss_pred HHHHHHhcCCCc----Cc-------eeEhHhhhhHHHHHHHHHHH-HHHhhhhHHHHHH--HHHHHHH-HHHHHHHHHhc
Confidence 776665532211 10 01123444455555554332 3333454433221 2222221 11111111100
Q ss_pred c-----ccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchhHHHh
Q 002208 810 N-----WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWLNL 857 (953)
Q Consensus 810 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~ 857 (953)
+ +.+..+ ...+.+|+.+++..++.++|+.++|++.|.+.|. .++..
T Consensus 1100 ~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~-~~~~~ 1150 (1178)
T PLN03190 1100 PTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC-DVQIA 1150 (1178)
T ss_pred ccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHH
Confidence 0 111111 1235566676788888889999999988877754 44443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-96 Score=873.28 Aligned_cols=545 Identities=23% Similarity=0.364 Sum_probs=454.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCc--hhhHHHHHHHHHHHHHHHHHH----HHHhhhHHHHhhcCCCC-eEE
Q 002208 67 GFMWNPLSWVMEAAAVMAIALANGEG--KPPD--WQDFVGIVCLLVINSTISFIE----ENNAGNAAAALMAGLAP-KTK 137 (953)
Q Consensus 67 ~~~~~~~~~il~~~ail~~~l~~~~~--~~~~--~~~~~~i~~~~~i~~~i~~~~----e~~~~~~~~~l~~~~~~-~~~ 137 (953)
.+++||+.|+++++++++++++.... .... +...+.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47899999999999999998752100 0111 245667778888888888777 78999999999998886 786
Q ss_pred -EEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC---CcccccceeeeceEEE
Q 002208 138 -LLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG---DEVFSGSTCKQGEIEA 213 (953)
Q Consensus 138 -V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~ 213 (953)
|.|||++++|++++|+|||+|.|++||+|||||++++| ...||||+|||||.||.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 569999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHhhccc
Q 002208 214 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPI-QHRKYRDGIDNLLVLLIGGIPI 291 (953)
Q Consensus 214 vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~iP~ 291 (953)
+|+++|.+|++||+++++++++ +++|+|..+..+...+.++ ++ +++ +..+.+ ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii-~l-~~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTII-FL-VVI--LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHH-HH-HHH--HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998764 7889987665543322211 11 111 111111 1123445667778888999999
Q ss_pred chHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhcc
Q 002208 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASR 371 (953)
Q Consensus 292 aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 371 (953)
+||..++++.+.|+.||+|+|+++|+++++|+||++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998777665431 234556667777766665
Q ss_pred CcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccH-HHHHHHHHH
Q 002208 372 TENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKE-DLKKKVHAI 450 (953)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~ 450 (953)
.. .||++.|++.++..... .......+++||++++|+|++.+ +|+ .+.||||+.++++|+... ..+..+++.
T Consensus 340 ~s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 AD-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred CC-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 44 49999999987642210 00112245689999999999864 343 466999999999997421 223456677
Q ss_pred HHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhC
Q 002208 451 IDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (953)
Q Consensus 451 ~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (953)
.++++++|+|+++++. +++++|+++++||||||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 531 MGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 531 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
++ ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 95 269999999999999999999999999999999999999999999999
Q ss_pred CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 611 DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL 669 (953)
Q Consensus 611 ~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (953)
+|+|+||++||+||++|||++|++++++||++|.|+++++.|.++.|+...+..+...|
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987766555443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-93 Score=842.66 Aligned_cols=537 Identities=25% Similarity=0.328 Sum_probs=451.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcC----CC---CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCC-eEE
Q 002208 66 LGFMWNPLSWVMEAAAVMAIALANG----EG---KPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAP-KTK 137 (953)
Q Consensus 66 l~~~~~~~~~il~~~ail~~~l~~~----~~---~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~~~ 137 (953)
..||+||+.++++++++++++++.. .+ ....|...+.+++.+++...++.++|+|+++++++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3589999999999999999987521 11 112344444555556666777789999999999999998775 799
Q ss_pred EEECCe-EEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCc---ccccceeeeceEEE
Q 002208 138 LLRDGK-WSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDE---VFSGSTCKQGEIEA 213 (953)
Q Consensus 138 V~RdG~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~~~ 213 (953)
|+|||+ +++|++++|+|||+|.|++||.|||||++++| .+.||||+|||||.||.|++|+. +|+||.|.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999998 99999999999999999999999999999999 58999999999999999999998 99999999999999
Q ss_pred EEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccc
Q 002208 214 VVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIA 292 (953)
Q Consensus 214 vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~a 292 (953)
+|+++|.+|++||+.++++++ .+++|+|..++.+...+...+++.++..+.+.+ +.+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~-~~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA-YSGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 468899987777655433222221211111111 11222 36788899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccC
Q 002208 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRT 372 (953)
Q Consensus 293 Lp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~ 372 (953)
|+..++.+...|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|++.+... ..+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999987652 2356677788877777665
Q ss_pred cCCChHHHHHHHhcCCh---hhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhcc-HHHHHHHH
Q 002208 373 ENQDAIDAAIVGMLADP---KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-EDLKKKVH 448 (953)
Q Consensus 373 ~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 448 (953)
.+ ||.+.|++.++... ......++..+++||++.++++++.+ +| ..+.||++|.+++.|+.. ...+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999998876431 11111245677899999988887654 34 478999999999999642 23456788
Q ss_pred HHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH
Q 002208 449 AIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 449 ~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (953)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999964 389999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 529 LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 529 lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+|++ ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 2699999999999999999999999999999999999999999999
Q ss_pred ecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 002208 609 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (953)
Q Consensus 609 mg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni 658 (953)
||+|||+||++||+||+||||++|++++++||++.-.--....|++..-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998554555666665444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-88 Score=801.47 Aligned_cols=541 Identities=24% Similarity=0.310 Sum_probs=453.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcC---C---CCCCchhhH---HHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCC-e
Q 002208 66 LGFMWNPLSWVMEAAAVMAIALANG---E---GKPPDWQDF---VGIVCLLVINSTISFIEENNAGNAAAALMAGLAP-K 135 (953)
Q Consensus 66 l~~~~~~~~~il~~~ail~~~l~~~---~---~~~~~~~~~---~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~ 135 (953)
..||.||+.++++++++++++++.. . +....|++. +.+++.+++...++.++|+|++++.++|++..++ .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3578999999999999999987431 1 111246654 3344456677778889999999999999998877 4
Q ss_pred EEEEE-CCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCc---ccccceeeeceE
Q 002208 136 TKLLR-DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDE---VFSGSTCKQGEI 211 (953)
Q Consensus 136 ~~V~R-dG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~ 211 (953)
++|+| ||++++|++++|+|||+|.|++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.|.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 99999999999999999999999999999999999 68999999999999999999985 999999999999
Q ss_pred EEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcc
Q 002208 212 EAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIP 290 (953)
Q Consensus 212 ~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP 290 (953)
.++|+++|.+|++||+.++++++ .+++|+|..++.+..++.+.+++.++. +..+..+. .....+...+++++++||
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP 262 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIP 262 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCc
Confidence 99999999999999999999876 467999988777665443222221111 11111111 122356777899999999
Q ss_pred cchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhc
Q 002208 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARAS 370 (953)
Q Consensus 291 ~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~ 370 (953)
|+|+...+.+...|+.||+|+|+++|++.++|+||++|+||||||||||+|+|++.+... ..+.+.++++..++.++
T Consensus 263 ~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~ 339 (675)
T TIGR01497 263 TTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLAS 339 (675)
T ss_pred hhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhc
Confidence 988877777777899999999999999999999999999999999999999999988652 23567778888887776
Q ss_pred cCcCCChHHHHHHHhcCChhh--hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhcc-HHHHHHH
Q 002208 371 RTENQDAIDAAIVGMLADPKE--ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-EDLKKKV 447 (953)
Q Consensus 371 ~~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~ 447 (953)
... +||.+.|++.++..... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|... ...+.++
T Consensus 340 ~~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~ 414 (675)
T TIGR01497 340 LAD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDL 414 (675)
T ss_pred CCC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHH
Confidence 654 48999999887643211 1112345678999999877765443 45 468999999999988532 2334667
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 527 (953)
++.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 888899999999999999753 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 528 RLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 528 ~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
++|++ +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||
T Consensus 482 ~lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 482 EAGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HcCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 99995 269999999999999999999999999999999999999999999
Q ss_pred EecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 002208 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (953)
Q Consensus 608 amg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~ 661 (953)
||++|+++|+++||++++++||++|++++++||+++-+....+.|+++.++.-.
T Consensus 532 Am~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred EeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 999999999999999999999999999999999999999999999888777543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-87 Score=771.32 Aligned_cols=676 Identities=24% Similarity=0.330 Sum_probs=511.2
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 002208 25 EVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIV 104 (953)
Q Consensus 25 ~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~ 104 (953)
+..+......+||+.+++.+|+..||+|.+..+..+.+..++++..+|+ +++.+..+..|... .+++.+..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 4444445557899999999999999999999999999999999999999 67777777766643 2445556677
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcC-CCcccccEEEEecCCeEEeec
Q 002208 105 CLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKL-GDIIPADARLLEGDPLKVDQS 183 (953)
Q Consensus 105 ~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~-Gd~IPaD~~ll~g~~l~Vdes 183 (953)
++.+.+...+.+|.++..+.+..+- .....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 7778888889999998888877744 34578999999999999999999999999998 8899999999999 6889999
Q ss_pred CCCCCCeeEecCCC-------------------Ccccccceeee------ceEEEEEEEecchhHHHHHHHhhhccCCCC
Q 002208 184 ALTGESLPVTKNPG-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 238 (953)
Q Consensus 184 ~LTGEs~pv~K~~g-------------------~~v~~Gs~v~~------G~~~~vVi~tG~~T~~gki~~l~~~~~~~~ 238 (953)
+|||||.||.|.|- +.+|.||.+.+ |.+.++|++||.+|..|++.+.+-.++ +.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-PV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-Cc
Confidence 99999999999873 46899999986 558999999999999998777665443 33
Q ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccc
Q 002208 239 HFQKVLTAIGNFC-ICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (953)
Q Consensus 239 ~lq~~~~~i~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~ 317 (953)
+++-.-+.+..+. +..+++..++..++.+...+.+....+..++.++.+.+|+|||.++++....+..||.|+|++|-+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 4443333322111 111111112222222334567888889999999999999999999999999999999999999999
Q ss_pred hhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh---hcc---------------------CCCh--HHHHHHHHHhcc
Q 002208 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV---FAK---------------------GVEK--DHVMLLAARASR 371 (953)
Q Consensus 318 ~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~~~---------------------~~~~--~~~l~~a~~~~~ 371 (953)
++.+...|++|++|||||||||++.+.+-...... ... ...+ .....+|.+++-
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 99999999999999999999999999886544210 000 0001 112222222221
Q ss_pred -----CcCCChHHHHHHHhcC------------------------Chhh--------hh-cCcceEEeecCCCCCceEEE
Q 002208 372 -----TENQDAIDAAIVGMLA------------------------DPKE--------AR-AGIREVHFFPFNPVDKRTAL 413 (953)
Q Consensus 372 -----~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~l~~~pF~s~~kr~sv 413 (953)
.-.+||+|..+.+.-+ +|.+ .. ..+.+++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1124666544432110 1110 01 14778999999999999999
Q ss_pred EEEcC-CCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCC--------CCCCCCCCcEEE
Q 002208 414 TYIDS-DGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPER--------TKESPGGPWQFV 484 (953)
Q Consensus 414 ~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~--------~~~~~e~~l~ll 484 (953)
++.++ +.+...|+|||||.|.++|+. +.+++.+++.++.|+.+|+|++|+|+|+++.. .++..|++|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99875 467899999999999999984 57889999999999999999999999999866 367889999999
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC----------c--------------c
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS----------A--------------S 540 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~----------~--------------~ 540 (953)
|++.||+++|++++.+|++|++|.|+++|+||||..||..+||+|||....... . .
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 999999999999999999999999999999999999999999999996532100 0 0
Q ss_pred ccC----------cc----------ccccc-----------CchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEE
Q 002208 541 LLG----------QD----------KDASI-----------AALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 589 (953)
Q Consensus 541 l~~----------~~----------~~~~~-----------~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~ 589 (953)
..+ .. ..-.+ ..+.+++++.+.+|||||+|.||.++|+.||+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 000 00 00011 123356677889999999999999999999999999999
Q ss_pred EcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 590 TGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL 669 (953)
Q Consensus 590 ~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (953)
||||+||+.|||+|||||+++++. |.-||-+.=.-++++.+++.|++||...-.--..+.|...+.+..+...+ ++
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~L 933 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FL 933 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--ee
Confidence 999999999999999999998532 33366666666799999999999999876666666666555443322221 12
Q ss_pred h-hcCCccHHHHHHHHHhhhhc-hhcccc----CCCCCCCCCCccchHHHHH
Q 002208 670 I-WKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPLPDSWKLKEIFA 715 (953)
Q Consensus 670 ~-~~~~~~~~~il~i~l~~~~~-~~~l~~----d~~~~~~~p~~~~~~~~~~ 715 (953)
+ -+..++-+|.+++.++-..+ +..++. ++..+.++|.+.-.++++.
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~ 985 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILV 985 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhh
Confidence 2 24567888888888876544 344443 3334455555544444433
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-89 Score=829.78 Aligned_cols=788 Identities=18% Similarity=0.222 Sum_probs=582.1
Q ss_pred HHHhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002208 45 RLQIFGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENN 120 (953)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~ 120 (953)
+...|-.|.+.+.||+.+ +.+++||.++.|++|++.++++++. .++...|...+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999864 7889999999999999999999985 335567888889999999999999999999
Q ss_pred hhhHHHHhhcCCCCeEEEEECCe-EEEEEccCcCCCcEEEEcCCCcccccEEEEecC----CeEEeecCCCCCCeeEecC
Q 002208 121 AGNAAAALMAGLAPKTKLLRDGK-WSEEEAAILVPGDIISIKLGDIIPADARLLEGD----PLKVDQSALTGESLPVTKN 195 (953)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~RdG~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~ 195 (953)
+++....++ ..++.|.|++. +++..|++|++||+|.+..+|.+|||.+|++++ -|+|++++|+||++.+.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999887654 56889998644 899999999999999999999999999999764 3999999999999999885
Q ss_pred C-----------------------------------------------CCcccccceeeece-EEEEEEEecchhHHHHH
Q 002208 196 P-----------------------------------------------GDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (953)
Q Consensus 196 ~-----------------------------------------------g~~v~~Gs~v~~G~-~~~vVi~tG~~T~~gki 227 (953)
. .+++++|+++++++ ++|+|+.||.+|++++.
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 4 13577899999886 89999999999988764
Q ss_pred HHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------------c-----chHHHHHHHHHHHHhhc
Q 002208 228 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQH-------------R-----KYRDGIDNLLVLLIGGI 289 (953)
Q Consensus 228 ~~l~~~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-------------~-----~~~~~~~~~l~llv~~i 289 (953)
... ...+++.+++.++.+...+.+..+..+++..+....... . .....+..++.++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 332 334778889988887655443333322222221111100 0 01123556778889999
Q ss_pred ccchHHHHHHHHHHHHHHHh----------hCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCCh
Q 002208 290 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEK 359 (953)
Q Consensus 290 P~aLp~~~~i~~~~~~~~l~----------~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 359 (953)
|++|++.+++....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.++...+|...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999885443 34788999999999999999999999999999999999987533322110
Q ss_pred --------------------------------------------HHHHHHHHHhc-cC------------cCCChHHHHH
Q 002208 360 --------------------------------------------DHVMLLAARAS-RT------------ENQDAIDAAI 382 (953)
Q Consensus 360 --------------------------------------------~~~l~~a~~~~-~~------------~~~~~~~~ai 382 (953)
.+.....+.|. .. +.+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 01122222222 11 1135788888
Q ss_pred HHhcCChh----------------hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhh-ccHHHHH
Q 002208 383 VGMLADPK----------------EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCN-AKEDLKK 445 (953)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 445 (953)
+..+.+.. .....|+.++.+||+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 87663211 024579999999999999999999999999999999999999999998 4566788
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeccCCCCC-------------------------CCCCCCcEEEEEeecCCCCCCCHHHH
Q 002208 446 KVHAIIDKYAERGLRSLAVARQEVPERTK-------------------------ESPGGPWQFVGLLPLFDPPRHDSAET 500 (953)
Q Consensus 446 ~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lR~~v~~~ 500 (953)
+..+++++||.+|+||||+|||+++++++ +.+|+||+++|.+++||++|++|||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88999999999999999999999987652 46799999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-------------------------------------
Q 002208 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG------------------------------------- 543 (953)
Q Consensus 501 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~------------------------------------- 543 (953)
|+.|++||||+||+|||+.+||.+||.+|++..+.+....+..
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999775432211111
Q ss_pred --------cccccccCchhHHHHH-----HhcCcEeecCHHHHHHHHHHhcc-cCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 544 --------QDKDASIAALPVEELI-----EKADGFAGVFPEHKYEIVKKLQE-RKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 544 --------~~~~~~~~~~~~~~~~-----~~~~vfar~~P~~K~~iV~~lq~-~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
......+++++...++ .++.+|||++|.||+.+|+..++ .+.+++++|||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 1111111221111222 24568999999999999999974 489999999999999999999999999
Q ss_pred -c-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----ccHHHHHHH
Q 002208 610 -A-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFD----FSPFMVLII 683 (953)
Q Consensus 610 -g-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~----~~~~~il~i 683 (953)
| +|.+|+. +||+.+.+++|.....++ ||||.|.|+.+++.|.+++|+...+..+++.++.+|. +.++++.++
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 5666555 999999999998887666 9999999999999999999999999999999888764 455566666
Q ss_pred HHhhhhc-hhccccCCCCCC--------------CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCcc
Q 002208 684 AILNDGT-IMTISKDRVKPS--------------PLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVR 748 (953)
Q Consensus 684 ~l~~~~~-~~~l~~d~~~~~--------------~~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~ 748 (953)
|++...+ ++.+|.-..+.+ +....++. +.|+.+++.|+++++++|++++..+... .....|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~-~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G-- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW-KRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNG-- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch-HHHHHHHHHHHHhheeeeeeeHhhheee-eeccCC--
Confidence 6655544 567754322221 11123333 4555666779999999998877776432 111112
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhhc-----------ccccccc
Q 002208 749 AIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYAN-----------WGFARIK 817 (953)
Q Consensus 749 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 817 (953)
...+.....+.+|+.+++.....+ ..-+.+|.|..+. .+.+.++..++..+ +|.. .+++...
T Consensus 974 -~~~d~~~~G~~~~T~~Vivv~~~i-aL~~~ywT~i~~i---~i~gSi~~~f~f~~--iy~~~~~~~~~~~~~~~~~~~~ 1046 (1151)
T KOG0206|consen 974 -LTADYWTLGTTVFTIIVIVVNLKI-ALETSYWTWINHI---VIWGSILLWFVFLF--IYSELTPAISTPDPFYGVAEHL 1046 (1151)
T ss_pred -CcCChhhccceEEEEEEEEEEeee-eeeehheeHHHHH---HHHHHHHHHHHHHH--HHhccccccCCCccHHHHHHHH
Confidence 111222333445554444444331 2222335443332 22222222222222 2211 1112223
Q ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchh
Q 002208 818 GVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKA 853 (953)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~ 853 (953)
.....+|+++++..+++++|+-.+|.+.+.++|...
T Consensus 1047 ~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~ 1082 (1151)
T KOG0206|consen 1047 LSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDH 1082 (1151)
T ss_pred hcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHH
Confidence 335568888889999999999999999888876553
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-84 Score=768.92 Aligned_cols=502 Identities=28% Similarity=0.406 Sum_probs=436.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEE-CCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC
Q 002208 98 QDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLR-DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 176 (953)
Q Consensus 98 ~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R-dG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~ 176 (953)
.++.++++++++...++.+-..|+.+++++|+++.|.++++++ ||++++||.++|+|||+|.|+|||+||+||++++|
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G- 253 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG- 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeC-
Confidence 6677788888888888888888999999999999999997776 56699999999999999999999999999999999
Q ss_pred CeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHH
Q 002208 177 PLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSI 255 (953)
Q Consensus 177 ~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i 255 (953)
...||||+|||||.||.|.+||.||+||.+.+|..+..|+++|.+|.++++.++++++ .++++.|+..++++.+++..+
T Consensus 254 ~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 254 SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 4689999999999999999999999999999999999999999999999999999988 488999999999999887755
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCC
Q 002208 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (953)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (953)
+++.++.++++++....+|..++..++++|+++|||+|.+++|++...|..+.+++|+++|+.+++|.++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 55455545544444446888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEE
Q 002208 336 GTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTY 415 (953)
Q Consensus 336 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (953)
||||+|+++|.+... . .+ ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|- +.-.. .
T Consensus 414 GTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G---~Gv~~-~- 481 (713)
T COG2217 414 GTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG---RGVEA-E- 481 (713)
T ss_pred CCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc---CcEEE-E-
Confidence 999999999998763 2 23 78889999888776665 999999999765322 111222233331 11111 1
Q ss_pred EcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCC
Q 002208 416 IDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRH 495 (953)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~ 495 (953)
-+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|++||
T Consensus 482 --v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 482 --VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred --ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 145 4567799988754211 1111 5566778889999999998876 89999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHH
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYE 575 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~ 575 (953)
|++++|++||+.|+++.|+||||..+|.++|+++||+ +++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHH
Confidence 9999999999999999999999999999999999995 3699999999999
Q ss_pred HHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002208 576 IVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (953)
Q Consensus 576 iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~ 655 (953)
+|+.||++|++|+|+|||+||+|||++||||||||.|+|+|+++||++|+++++..++.+++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002208 656 ITIRIVFG 663 (953)
Q Consensus 656 ~ni~~~~~ 663 (953)
+|...+..
T Consensus 671 yn~~~ipl 678 (713)
T COG2217 671 YNAIAIPL 678 (713)
T ss_pred HHHHHHHH
Confidence 99865443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-80 Score=753.78 Aligned_cols=498 Identities=27% Similarity=0.371 Sum_probs=436.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 96 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
.|.++++++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002208 176 DPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 254 (953)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~ 254 (953)
...||||+|||||.|+.|++||.||+||.+.+|.+++.|+++|.+|.+||+.++++++ .+++|+|+.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999887 47899999999999987766
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCC
Q 002208 255 IAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (953)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 334 (953)
+++..++.+++++.+.+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 65544444444444456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEE-
Q 002208 335 TGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTAL- 413 (953)
Q Consensus 335 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv- 413 (953)
|||||+|+|+|.+... ..+.++++++.+++..+.. ..||++.|+++++... +. .+||.++.+.+.-
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 2346677888877655443 4599999999876421 11 2467666665531
Q ss_pred EEE-cCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCC
Q 002208 414 TYI-DSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDP 492 (953)
Q Consensus 414 ~~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~ 492 (953)
-++ ..+|+. +..|+++.+.+ ..+.+.+.++++.++|+|++++|++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 224543 44689988754 12334455678899999999999854 89999999999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+|||++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 267789999
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 652 (953)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|++.++++||++++++++..++.+++.||++++||++++.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002208 653 AVSITIRIV 661 (953)
Q Consensus 653 ~l~~ni~~~ 661 (953)
++.+|+..+
T Consensus 697 a~~~n~~~i 705 (741)
T PRK11033 697 ALGLKAIFL 705 (741)
T ss_pred HHHHHHHHH
Confidence 999997543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-78 Score=712.93 Aligned_cols=474 Identities=37% Similarity=0.541 Sum_probs=417.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhc--CCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEe
Q 002208 104 VCLLVINSTISFIEENNAGNAAAALMA--GLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181 (953)
Q Consensus 104 ~~~~~i~~~i~~~~e~~~~~~~~~l~~--~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vd 181 (953)
+++++++..++.+++++++++.+.|++ ..+++++|+|+| +++|++++|+|||+|.+++||.|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345677888999999999999999998 778899999999 99999999999999999999999999999999 78999
Q ss_pred ecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002208 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGM 259 (953)
Q Consensus 182 es~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~-~~~~~~i~~~~ 259 (953)
||+|||||.|+.|.+||.+|+||.+.+|+..+.|+.+|.+|..+++..++.+.. .++++++..+++. .++++.+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999998 55444333323
Q ss_pred HHHHHHHHhcccc--chHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCC
Q 002208 260 LVEIIVMYPIQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (953)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGT 337 (953)
++.+++++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3322222222122 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEc
Q 002208 338 LTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYID 417 (953)
Q Consensus 338 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 417 (953)
||+|+|+|.++... . + ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987631 1 0 123459999999987642 123568999999999998875
Q ss_pred CCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCH
Q 002208 418 SDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDS 497 (953)
Q Consensus 418 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v 497 (953)
.++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHH
Q 002208 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIV 577 (953)
Q Consensus 498 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV 577 (953)
+++|+.|+++|++++|+|||++.+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002208 578 KKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (953)
Q Consensus 578 ~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~n 657 (953)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002208 658 IRIVFGFM 665 (953)
Q Consensus 658 i~~~~~~~ 665 (953)
+..++..+
T Consensus 475 ~~~~~~a~ 482 (499)
T TIGR01494 475 LILIPLAA 482 (499)
T ss_pred HHHHHHHH
Confidence 87554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-79 Score=709.30 Aligned_cols=539 Identities=24% Similarity=0.339 Sum_probs=449.8
Q ss_pred Cchhh-HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCe-EEEEEccCcCCCcEEEEcCCCcccccEEE
Q 002208 95 PDWQD-FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGK-WSEEEAAILVPGDIISIKLGDIIPADARL 172 (953)
Q Consensus 95 ~~~~~-~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 172 (953)
..++| ..+++.++.+...++.....++..++..|+...|.++.++.+|+ +++|+.+.|++||+|.|+||++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 34444 44455566666666666677778888899998899999999997 89999999999999999999999999999
Q ss_pred EecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHH
Q 002208 173 LEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC 251 (953)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~ 251 (953)
++| +.+||||.+|||++||.|++|+.|.+||.+.+|.....++.+|.+|.+++|.+++++++ .+.|.|+.+|+++.++
T Consensus 418 v~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 999 57999999999999999999999999999999999999999999999999999999985 8899999999999987
Q ss_pred HHHHHHHHHHHHHHHHhccc----------cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHH
Q 002208 252 ICSIAVGMLVEIIVMYPIQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAI 321 (953)
Q Consensus 252 ~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~i 321 (953)
...+++..++.+++|..+.. ..+..++..++++++++|||+|.++.|++.+.|....+++|+++|..+++
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 76665545554444443322 34556788889999999999999999999999999999999999999999
Q ss_pred HhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEe
Q 002208 322 EEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHF 401 (953)
Q Consensus 322 E~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~ 401 (953)
|.+.+++++.||||||||+|+++|.+... +....+..+++.+++..+.. ..||+..|++.++.............++
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~-SeHPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESG-SEHPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcC-CcCchHHHHHHHHHhcccccCcccccee
Confidence 99999999999999999999999998764 33335667777666654443 4499999999998654321111222233
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCc
Q 002208 402 FPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481 (953)
Q Consensus 402 ~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l 481 (953)
..|....+...+.+ +|+. ++-|.-+.+... .....++++..+++....|..+.+++...
T Consensus 654 ~~~pg~g~~~~~~~---~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------- 712 (951)
T KOG0207|consen 654 EYFPGEGIYVTVTV---DGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG------------- 712 (951)
T ss_pred ecccCCCcccceEE---eeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC-------------
Confidence 33433332212221 3433 677888876642 22234557777888889999999999987
Q ss_pred EEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHh
Q 002208 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEK 561 (953)
Q Consensus 482 ~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 561 (953)
+++|++.++|++|||+..+|+.||++||++.|+||||..+|+++|+++|+.
T Consensus 713 ~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------- 763 (951)
T KOG0207|consen 713 QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------- 763 (951)
T ss_pred EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------
Confidence 899999999999999999999999999999999999999999999999974
Q ss_pred cCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHH
Q 002208 562 ADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRA 641 (953)
Q Consensus 562 ~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~ 641 (953)
+|+|.+.|+||.++||.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+||+.+++..++.++..+|+
T Consensus 764 -~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 764 -NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred -eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhh
Q 002208 642 IFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILND 688 (953)
Q Consensus 642 ~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~ 688 (953)
+++|+|.++.|++.+|+..+....+.++.+++.++|++--....++.
T Consensus 843 t~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASS 889 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhh
Confidence 99999999999999998766666666666666688876555444443
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-78 Score=670.91 Aligned_cols=765 Identities=20% Similarity=0.258 Sum_probs=527.2
Q ss_pred HHHHhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 002208 44 NRLQIFGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKP-PDWQDFVGIVCLLVINSTISFIEE 118 (953)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~-~~~~~~~~i~~~~~i~~~i~~~~e 118 (953)
.++++|-+|.+...|++.+ ..+++||+-+++.++++.++.+++.....|.. .+|...+.++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5668899999999887753 56678888888899888888887743332222 244444445555555555555555
Q ss_pred HHhhhHHHHhhcCCCCeE-EEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC----CeEEeecCCCCCCeeEe
Q 002208 119 NNAGNAAAALMAGLAPKT-KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD----PLKVDQSALTGESLPVT 193 (953)
Q Consensus 119 ~~~~~~~~~l~~~~~~~~-~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~l~Vdes~LTGEs~pv~ 193 (953)
+++.+.. + ..+. +.-|||-..+ +++++++||+|.+..+++||||.++++.+ .+.|-+-.|+||+.-+.
T Consensus 154 ~~rd~~~---N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDREL---N---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhh---h---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 5554432 2 2333 3447776555 99999999999999999999999999643 58999999999998777
Q ss_pred cCC-----------------------------------------------CCcccccceeeeceEEEEEEEecchhHHHH
Q 002208 194 KNP-----------------------------------------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGK 226 (953)
Q Consensus 194 K~~-----------------------------------------------g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gk 226 (953)
|-| .|+++++|.+.+|.++|+|++||.+|+
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 644 257999999999999999999999996
Q ss_pred HHHhhhcc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 002208 227 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (953)
Q Consensus 227 i~~l~~~~---~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~ 303 (953)
..++.+ .+.+.++..+|.+.+.+.+.+++..+ +++.....+.+|...+.+++.++...||++|-+.+.++..+
T Consensus 304 --svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 304 --SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred --HHhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 333333 36677888888888876554443222 22233345678888899999999999999999999999999
Q ss_pred HHHHHhhC----CccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCC---------------------
Q 002208 304 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVE--------------------- 358 (953)
Q Consensus 304 ~~~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--------------------- 358 (953)
-++.+..+ |.++|..+.-|+||+++++.+|||||||+|+|.++++.....+.+.+
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 99888875 56799999999999999999999999999999999987642221100
Q ss_pred --------------hHHHHHHHHHhccCc---C--------CChHHHHHHHhc-----------------CChhhhhcCc
Q 002208 359 --------------KDHVMLLAARASRTE---N--------QDAIDAAIVGML-----------------ADPKEARAGI 396 (953)
Q Consensus 359 --------------~~~~l~~a~~~~~~~---~--------~~~~~~ai~~~~-----------------~~~~~~~~~~ 396 (953)
.+.+..+|.+++..+ + ..|.+.|+++.- .++......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 012233333332211 1 134444443321 0111123478
Q ss_pred ceEEeecCCCCCceEEEEEEcC-CCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCC
Q 002208 397 REVHFFPFNPVDKRTALTYIDS-DGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKE 475 (953)
Q Consensus 397 ~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~ 475 (953)
++++.+||+|+.|||.++++++ .|+...+.|||+.+|....+. .+++++...+||++|+|||.+|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 688999999999998877664 35677778899999999999999999876531
Q ss_pred --------------------------CCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 476 --------------------------SPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 476 --------------------------~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
.+|.+|+++|+++.||++|+|++.+++.||+|||||||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccC----------------cc-cccccCch-----------hHHHHHH--hcCcEeecCHHHHHHHHHH
Q 002208 530 GMGTNMYPSASLLG----------------QD-KDASIAAL-----------PVEELIE--KADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 530 Gi~~~~~~~~~l~~----------------~~-~~~~~~~~-----------~~~~~~~--~~~vfar~~P~~K~~iV~~ 579 (953)
++.+......++.. .. ..-.++++ ++.++.. .+.++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 98653211111100 00 00012222 3333332 3468999999999999999
Q ss_pred hccc-CCEEEEEcCCccCHHhhhhCCeeEEe-cCchHHHhhccCEeecCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHH
Q 002208 580 LQER-KHICGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSI 656 (953)
Q Consensus 580 lq~~-g~~V~~~GDG~ND~paLk~AdVGIam-g~~t~~a~~aaDivl~~~~~~~i~~ai-~~gR~~~~~i~~~i~~~l~~ 656 (953)
+|++ |..|+++|||.||+.|+++||+||++ |+....|.-|||+.++++ +.+-+++ -|||..|+|-.+.-+|.+-.
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF--~Hv~rLLl~HGR~SYkrsa~laqfViHR 853 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQF--SHVSRLLLWHGRNSYKRSAKLAQFVIHR 853 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHH--HHHHHHhhccccchHHHHHHHHHHHHhh
Confidence 9986 89999999999999999999999999 644444555999999885 4454443 48999999999988876544
Q ss_pred HHHHHHHHHHHH-HhhcCC---ccHH-HHHHHHHhhhhchhccccCCCCCC----CCC---------CccchHHHHHHHH
Q 002208 657 TIRIVFGFMFIA-LIWKFD---FSPF-MVLIIAILNDGTIMTISKDRVKPS----PLP---------DSWKLKEIFATGV 718 (953)
Q Consensus 657 ni~~~~~~~~~~-~~~~~~---~~~~-~il~i~l~~~~~~~~l~~d~~~~~----~~p---------~~~~~~~~~~~~~ 718 (953)
...+..+..++. .++--| +.-+ ++.+..+.+-.+..++..|+.-.+ ..| .....+. |..++
T Consensus 854 GL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKt-F~iwv 932 (1051)
T KOG0210|consen 854 GLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKT-FFIWV 932 (1051)
T ss_pred hHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhh-hhhhh
Confidence 433222222211 111011 2222 333333333334577777764322 112 2222333 44455
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHH-HhhhccCCCCcccChhHHHHHHHHH
Q 002208 719 VLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQAL-IFVTRSRSWSYLERPGLLLVTAFVI 797 (953)
Q Consensus 719 ~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~rs~~~~~~~~~~~~l~~~~~~ 797 (953)
++++|++.+.+.++++.+.+.|+ ...++.|..+++....+ ++-+++ |. |.++++-++
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~t--w~------~~m~vae~l 990 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRT--WH------WLMVVAELL 990 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhh--hh------HHHHHHHHH
Confidence 56999988888766666544332 12355566666666554 334444 32 244455444
Q ss_pred HHHHHHHHHHhhccccc-ccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCch
Q 002208 798 AQLVATLIAVYANWGFA-RIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGK 852 (953)
Q Consensus 798 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 852 (953)
++.+..+-..+.. +++ .-.-.+|.+++-+.++.++..+|..+.|+++|++-||+
T Consensus 991 sL~~Yivsl~~l~-~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 991 SLALYIVSLAFLH-EYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred HHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 4433222111110 111 11112455555556777788889999999988887765
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=699.00 Aligned_cols=516 Identities=27% Similarity=0.390 Sum_probs=434.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECC-eEEEEEccCcCC
Q 002208 76 VMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDG-KWSEEEAAILVP 154 (953)
Q Consensus 76 il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG-~~~~i~~~~Lv~ 154 (953)
.+.++++++++++ .|.++.+|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445566666665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc
Q 002208 155 GDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (953)
Q Consensus 155 GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~ 234 (953)
||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 4799999999999999999999999999999999999999999999999999998775
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCc
Q 002208 235 -NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (953)
Q Consensus 235 -~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~i 313 (953)
.+++++|+.+++++++++..++++.++.+++++. ...+ .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 5788999999999988766554434443333332 2222 77889999999999999999999999999999999999
Q ss_pred cccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCC--hHHHHHHHHHhccCcCCChHHHHHHHhcCChhh
Q 002208 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVE--KDHVMLLAARASRTENQDAIDAAIVGMLADPKE 391 (953)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 391 (953)
++|+++++|+||++|++|||||||||+|+|+|.+... . .+.+ +++++.+++..+.. ..||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999988653 1 2233 66777766655544 459999999988753211
Q ss_pred hhcCcc-eEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccC
Q 002208 392 ARAGIR-EVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVP 470 (953)
Q Consensus 392 ~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~ 470 (953)
.... + ....+| .+.....+ +|. ..+..|+++.+ + ... .+ ....++.+++++++|+|+++++...
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 11222221 342 34567888876 1 111 11 1223455677889999999999754
Q ss_pred CCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccc
Q 002208 471 ERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDAS 549 (953)
Q Consensus 471 ~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~ 549 (953)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----------------- 425 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------------- 425 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred cCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCc
Q 002208 550 IAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGL 629 (953)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~ 629 (953)
++|+++.|++|.++++.+++.++.|+|+|||.||+||+++|||||++|++++.+++.||+++.++++
T Consensus 426 -------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 426 -------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred -------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 2588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 662 (953)
Q Consensus 630 ~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~ 662 (953)
+.++.++++||++++||++++.|++.+|+..+.
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-76 Score=698.43 Aligned_cols=498 Identities=30% Similarity=0.422 Sum_probs=426.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCC
Q 002208 76 VMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPG 155 (953)
Q Consensus 76 il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~G 155 (953)
++.++++++++++ +|.++.+|+++++++..+++++++|+++.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-
Q 002208 156 DIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (953)
Q Consensus 156 DiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~- 234 (953)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.++++..
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 5789999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCcc
Q 002208 235 NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (953)
Q Consensus 235 ~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~il 314 (953)
.+++++|+.+++++++++..++++.++.+++++... .+..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 478899999999998876665554444444433322 233378889999999999999999999999999999999999
Q ss_pred ccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhc
Q 002208 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARA 394 (953)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (953)
+|+++++|++|++|++|||||||||+|+|+|.+... .+++.+++..+ ....||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAE-QASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987642 25666666443 3456999999998765321
Q ss_pred CcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC
Q 002208 395 GIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK 474 (953)
Q Consensus 395 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~ 474 (953)
.+...+.+|. +..... .+|+. +..|+++.+.+.. .+.+..+|.+++.++...
T Consensus 300 ~~~~~~~~~g----~gi~~~---~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----EGVRAV---VDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----CeEEEE---ECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 1222222221 111111 24543 4568887653311 014567788888887543
Q ss_pred CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCch
Q 002208 475 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAAL 553 (953)
Q Consensus 475 ~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~ 553 (953)
.++|.+.++|++|||++++|++|+++|+ +++|+|||+..++..+++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999994
Q ss_pred hHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhH
Q 002208 554 PVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVI 632 (953)
Q Consensus 554 ~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i 632 (953)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.+++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 248889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVF 662 (953)
Q Consensus 633 ~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~ 662 (953)
.+++..||++++|+++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975443
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-75 Score=691.08 Aligned_cols=506 Identities=27% Similarity=0.394 Sum_probs=421.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC-CeEEEEEccCcCCCcEEEEcCCCcccccEEEEe
Q 002208 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD-GKWSEEEAAILVPGDIISIKLGDIIPADARLLE 174 (953)
Q Consensus 96 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd-G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 174 (953)
+|....++++++++...++.+.++|+++++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3445555667777777888888889999999999999999999985 778999999999999999999999999999999
Q ss_pred cCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002208 175 GDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 253 (953)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~ 253 (953)
| .+.||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5789999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecC
Q 002208 254 SIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (953)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~D 333 (953)
.+++..++.+ +.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~-~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITF-VIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHH-HHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 5444333222 222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEE
Q 002208 334 KTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTAL 413 (953)
Q Consensus 334 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 413 (953)
||||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s-~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGS-EHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998652 22456777888777665544 49999999987743211111111122222 122222
Q ss_pred EEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCC
Q 002208 414 TYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPP 493 (953)
Q Consensus 414 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~l 493 (953)
.+ +| ..+..|+++.+.+.. .. ++++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~~---~g--~~~~iG~~~~~~~~~---~~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 TV---EG--TKIQLGNEKLLGENA---IK--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred EE---CC--EEEEEECHHHHHhCC---CC--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 21 45 346789998864311 11 112457899999988654 899999999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHH
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHK 573 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K 573 (953)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 3788899999
Q ss_pred HHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002208 574 YEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~ 653 (953)
.++++.++++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..+..+++.||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccHH
Q 002208 654 VSITIRIVFGFMFIALIWKFDFSPF 678 (953)
Q Consensus 654 l~~ni~~~~~~~~~~~~~~~~~~~~ 678 (953)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999865544443333344445553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-74 Score=712.84 Aligned_cols=521 Identities=24% Similarity=0.317 Sum_probs=434.4
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 97 WQD-FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 97 ~~~-~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
|++ +..+++++.+...++.+.+.|+.+++++|+++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 5677788888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002208 176 DPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 254 (953)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~ 254 (953)
...||||+|||||.|+.|++||.||+||.+.+|.+.+.|+++|.+|.+||+.++++++ ..++++|+..++++.+++..
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 47889999999999887655
Q ss_pred HHHHHHHHHHHHHhcccc--chHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEec
Q 002208 255 IAVGMLVEIIVMYPIQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 332 (953)
Q Consensus 255 i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~ 332 (953)
++++.++.+++++. .+. .+..++..++++++++|||||++++|+++..+..+++++|+++|+++++|+|+++|++||
T Consensus 444 v~~~a~~~~~~~~~-~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAAIWYF-FGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 55433333333332 222 255677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEE
Q 002208 333 DKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTA 412 (953)
Q Consensus 333 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~s 412 (953)
|||||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+. ... ...+|.....+.
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~G- 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDM-----TLP--QVNGFRTLRGLG- 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhC-----CCC--CcccceEecceE-
Confidence 999999999999987642 22466777777777665444 499999998876421 111 111232222211
Q ss_pred EEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCC
Q 002208 413 LTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDP 492 (953)
Q Consensus 413 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~ 492 (953)
+... .+|+ .+.+|+++.+.+... ..+.+.+.+++++++|.++++++++. .++|++.+.|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2454 456799998754221 12345666778889999999999865 79999999999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+|||++++|++|++.|+++.|+|||+..+|..+++++|+. ++|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHH
Confidence 9999999999999999999999999999999999999985 2588999999
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 652 (953)
|.++++.++.+++.|+|+|||.||+|||++||+||+||+|++.++++||++++++++..|..++++||+++++|++++.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCccHHHHH
Q 002208 653 AVSITIRIVFGFMFIALI-WKFDFSPFMVL 681 (953)
Q Consensus 653 ~l~~ni~~~~~~~~~~~~-~~~~~~~~~il 681 (953)
++.+|+..+...+..+.. +++.++|+.-.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~ 810 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVAG 810 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHHH
Confidence 999998655433321111 23246665433
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-72 Score=632.50 Aligned_cols=572 Identities=24% Similarity=0.304 Sum_probs=428.0
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhh
Q 002208 21 IPIEEVFEQLKCTREGLSS-TEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQD 99 (953)
Q Consensus 21 ~~~~~~~~~l~~~~~GLt~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~ 99 (953)
.|.++.+-.++.+ +|+.. +|++.-.++||.|+.+...+.+-..|.+.-..|+ ++|.+.++..|.+. ..|+.
T Consensus 148 fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 3444444444433 56663 4444444569999999999988888999999998 67888888888875 47777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcC---CCcccccEEEEecC
Q 002208 100 FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKL---GDIIPADARLLEGD 176 (953)
Q Consensus 100 ~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~---Gd~IPaD~~ll~g~ 176 (953)
.+.-+++++..-.--..|+.+.-+.... |..-+....|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7766655544333333444444333332 2334667899999999999999999999999987 5689999999999
Q ss_pred CeEEeecCCCCCCeeEecCCC-----------------Ccccccceeee-------------ceEEEEEEEecchhHHHH
Q 002208 177 PLKVDQSALTGESLPVTKNPG-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 226 (953)
Q Consensus 177 ~l~Vdes~LTGEs~pv~K~~g-----------------~~v~~Gs~v~~-------------G~~~~vVi~tG~~T~~gk 226 (953)
+|.|||++|||||.|.-|.+- ..+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 688999999999999999871 26899999876 559999999999999998
Q ss_pred HHHhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cchHHHHHHHHHHHHhhcccchHHHHHH
Q 002208 227 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 299 (953)
Q Consensus 227 i~~l~~~-~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~l~llv~~iP~aLp~~~~i 299 (953)
+.+.+-- +++.+.-.+ ..+ .+++.++ +++++..+|.+.. ++-...+.-+..++...+|.-||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLl--VFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLL--VFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHH--HHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8775533 333222111 111 1111111 1111222333221 1122345556667888999999999999
Q ss_pred HHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhc-------cCCChHHHHHHHHHhccC
Q 002208 300 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFA-------KGVEKDHVMLLAARASRT 372 (953)
Q Consensus 300 ~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-------~~~~~~~~l~~a~~~~~~ 372 (953)
+.-.+...|+|.+++|..+-.|.-.|++|+.|||||||||+..|.|....-..-. .....+.+..+|++++-.
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999864320000 011233455566555421
Q ss_pred -----cCCChHHHHHHHhcCCh---------hh-hhcCcceEEeecCCCCCceEEEEEEcCC----CcEEEEEeCcHHHH
Q 002208 373 -----ENQDAIDAAIVGMLADP---------KE-ARAGIREVHFFPFNPVDKRTALTYIDSD----GHWHRASKGAPEQI 433 (953)
Q Consensus 373 -----~~~~~~~~ai~~~~~~~---------~~-~~~~~~~l~~~pF~s~~kr~sv~~~~~~----g~~~~~~KGa~e~i 433 (953)
--+||++.|.+..++-. .+ .....++.+.+.|+|.-|||+++..... -+++..+|||||.|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 23699999999877411 11 1224777889999999999999875322 36788899999999
Q ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCC--------CCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHH
Q 002208 434 LALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPE--------RTKESPGGPWQFVGLLPLFDPPRHDSAETIRRAL 505 (953)
Q Consensus 434 l~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~--------~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~ 505 (953)
.++.. ++++.+++...+|+++|.||||++||+++. -.+|+.|++|+|.|++.|.-|+|+|++++|++|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 98875 567889999999999999999999999873 2368899999999999999999999999999999
Q ss_pred hcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcc---------------------------------------ccCccc
Q 002208 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS---------------------------------------LLGQDK 546 (953)
Q Consensus 506 ~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~---------------------------------------l~~~~~ 546 (953)
+.+.+|+||||||+.||.++|+++|+..+..+... ++|...
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 99999999999999999999999999654211000 011111
Q ss_pred ccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 547 ~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
+.....+.+.+++..+.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-+
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 11112224455667788999999999999999999999999999999999999999999999853
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-62 Score=533.91 Aligned_cols=520 Identities=26% Similarity=0.368 Sum_probs=402.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHHHHHHHHH----HHHHHHHhhhHHHHhhcCC-CCeEEE
Q 002208 68 FMWNPLSWVMEAAAVMAIALA----NGEGKPPDWQDFVGIVCLLVINSTI----SFIEENNAGNAAAALMAGL-APKTKL 138 (953)
Q Consensus 68 ~~~~~~~~il~~~ail~~~l~----~~~~~~~~~~~~~~i~~~~~i~~~i----~~~~e~~~~~~~~~l~~~~-~~~~~V 138 (953)
+.+||..++-++.++++.++. ..++...++.....|.+++.+..++ +.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888877777777766322 1111112333333333334444333 4444545444455665432 335677
Q ss_pred EEC-CeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC---CcccccceeeeceEEEE
Q 002208 139 LRD-GKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG---DEVFSGSTCKQGEIEAV 214 (953)
Q Consensus 139 ~Rd-G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~v 214 (953)
+++ |.++.+++.+|+.||+|+++.||.||+||.++|| ..+||||++||||.||-|.+| +.|-.||.+.+...+..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 678999999999999999998 67889999999999999
Q ss_pred EEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--chHHHHHHHHHHHHhhccc
Q 002208 215 VIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHR--KYRDGIDNLLVLLIGGIPI 291 (953)
Q Consensus 215 Vi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~ 291 (953)
+++.-.+|++.|+..+++.+ .+++|-+--++-+. ..+.++++++ ..-.|++..+ .-.-.+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL---~~LTliFL~~-~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILL---SGLTLIFLLA-VATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHH---HHHHHHHHHH-HHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999999999877 46777554443321 1111111111 1112221110 0112456778899999999
Q ss_pred chHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhcc
Q 002208 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASR 371 (953)
Q Consensus 292 aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 371 (953)
...--++-.--.|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+=.-.+.. ...|.+.+++...|..+|-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhh
Confidence 8888888777789999999999999999999999999999999999999875544443 3457888888887777665
Q ss_pred CcCCChHHHHHHHhcCChh-hh-hcCcc-eEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccH-HHHHHH
Q 002208 372 TENQDAIDAAIVGMLADPK-EA-RAGIR-EVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKE-DLKKKV 447 (953)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~-~~-~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 447 (953)
..+ .|--..++..+.... +. ..... ...+.||+.+.+++.+-. +++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 443 454555655543211 11 11111 357899998877665432 233 5678999999999887543 378889
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 527 (953)
++..++-++.|-..|+|+... +++|++.+.|-++|+.+|-+.+||++|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999999866 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 528 RLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 528 ~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
+.|+++ ..|.++||+|.++++.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999863 47899999999999999999999999999999999999999999
Q ss_pred EecCchHHHhhccCEeecCCCchhHHHHHHHhHHHH
Q 002208 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIF 643 (953)
Q Consensus 608 amg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~ 643 (953)
||.+||++||+|+.+|=+|.|...+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=315.51 Aligned_cols=222 Identities=35% Similarity=0.514 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCe-EEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEE
Q 002208 102 GIVCLLVINSTISFIEENNAGNAAAALMAGLAPK-TKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKV 180 (953)
Q Consensus 102 ~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~-~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~V 180 (953)
+|+++++++..+++++++++++.++++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||++++...+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888899999999999999999999988887 999999999999999999999999999999999999999337999
Q ss_pred eecCCCCCCeeEecC-----CCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002208 181 DQSALTGESLPVTKN-----PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 254 (953)
Q Consensus 181 des~LTGEs~pv~K~-----~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~ 254 (953)
|||+||||+.|+.|. +|+.+|+||.+.+|.+.++|++||.+|..|++.+.+.... +++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887664 5689999999999887655
Q ss_pred HHHHHHHHHHHHHh-ccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHh
Q 002208 255 IAVGMLVEIIVMYP-IQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (953)
Q Consensus 255 i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~ 323 (953)
++++.++.+++++. ....++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54434333332222 2456778889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-26 Score=239.77 Aligned_cols=211 Identities=32% Similarity=0.435 Sum_probs=151.7
Q ss_pred ceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCC
Q 002208 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNP 406 (953)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s 406 (953)
|++||||||||||+|++.+ . . .+...++..+...... ..||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~-s~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQG-SEHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCT-STSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhc-CCCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 4455555555444333 4499999998876543221 11 112222
Q ss_pred CCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEE
Q 002208 407 VDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486 (953)
Q Consensus 407 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~ 486 (953)
...++..... ++. +. |+++.+.+..... .. ...........|...+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--IS--PDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--cc--cchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222221111 122 22 8888877655421 11 11111223445556666654 3589999
Q ss_pred eecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 487 i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
+.+.|+|||+++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 13799
Q ss_pred ec--CHHHH--HHHHHHhcccCCEEEEEcCCccCHHhhhhCC
Q 002208 567 GV--FPEHK--YEIVKKLQERKHICGMTGDGVNDAPALKKAD 604 (953)
Q Consensus 567 r~--~P~~K--~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad 604 (953)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999988779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-14 Score=133.81 Aligned_cols=116 Identities=27% Similarity=0.394 Sum_probs=105.1
Q ss_pred EEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHh
Q 002208 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEK 561 (953)
Q Consensus 482 ~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 561 (953)
...+.++---++=++++++|++|++. ++|.+.|||...+-...|+-+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 46677777788889999999999999 99999999999999999999998642
Q ss_pred cCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-c--CchHHHhhccCEeecC
Q 002208 562 ADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARGASDIVLTE 626 (953)
Q Consensus 562 ~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g--~~t~~a~~aaDivl~~ 626 (953)
++|+..-|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +.++-+..+||+++-+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 57999999999999999999999999999999999999999999987 4 5667788999999854
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-12 Score=111.74 Aligned_cols=67 Identities=36% Similarity=0.544 Sum_probs=61.2
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccc-cccchHHHHHHHHHhHHHHHHHHHHHHH
Q 002208 18 LERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEE-KKESKILKFLGFMWNPLSWVMEAAAVMA 84 (953)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~il~~~ail~ 84 (953)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++.+.|+.|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7899999999999966 78999999999999999999954 5688899999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-09 Score=123.23 Aligned_cols=210 Identities=17% Similarity=0.201 Sum_probs=145.9
Q ss_pred CcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcc--------------
Q 002208 480 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQD-------------- 545 (953)
Q Consensus 480 ~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~-------------- 545 (953)
+-.|.|++...-++|++....|+.|-++-|+.+-.+-.+..-.+-.|.++||...+.....+...+
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 447999999999999999999999999999999999999999999999999976433211110000
Q ss_pred -------------------ccc---------------cc--------CchhHHH-----------------HHHhcCcEe
Q 002208 546 -------------------KDA---------------SI--------AALPVEE-----------------LIEKADGFA 566 (953)
Q Consensus 546 -------------------~~~---------------~~--------~~~~~~~-----------------~~~~~~vfa 566 (953)
+.+ .+ ++....+ +-.-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 00 0000000 000122588
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHH--hhhhCCeeEEecC--c-----------hHH--Hh------------
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAP--ALKKADIGIAVAD--A-----------TDA--AR------------ 617 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~p--aLk~AdVGIamg~--~-----------t~~--a~------------ 617 (953)
.++|+.--++++.+|++|++|+.+|...|-.. ..-+|||+|++.. . +.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999998543 3468999999852 1 111 11
Q ss_pred ----hccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCccHHHHHHHHHhhhh
Q 002208 618 ----GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF-IALIWKFDFSPFMVLIIAILNDG 689 (953)
Q Consensus 618 ----~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~~~ 689 (953)
-++|+-+-...+-+|..+|+..|.-..-+|+.+.|.+.......+..+. .+++.+..|+--+++|...|--.
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~P 1130 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIP 1130 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHH
Confidence 1233333333455788899999999999999999988877655444444 44456666777788887776543
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.6e-10 Score=116.18 Aligned_cols=166 Identities=16% Similarity=0.180 Sum_probs=113.4
Q ss_pred cCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 002208 672 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLP----DSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPD 743 (953)
Q Consensus 672 ~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p----~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 743 (953)
|.|++|+|+||+|+++|.+ ++++++|+++++ ++| ++...++.+...+..|+++++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999998 699999998764 122 222345677777889999999999888776531
Q ss_pred ccCccc--cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc----ChhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002208 744 KFGVRA--IRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE----RPGLLLVTAFVIAQLVATLIAVYAN--WGFAR 815 (953)
Q Consensus 744 ~~g~~~--~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 815 (953)
+|... ...+....+|++|..+++++.++.++.|+++.+.+. +.|++++.+++++.++..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 12111 011245689999999999999999999996643222 23557777777666554444 4543 22356
Q ss_pred cccchHhHHHHHHHHHHHHHHHHHHHHHH
Q 002208 816 IKGVGWGWAGVIWLYSIVFYVPLDVMKFA 844 (953)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 844 (953)
+.+.++.+|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 77778888888899999999999999974
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.2e-10 Score=95.56 Aligned_cols=60 Identities=45% Similarity=0.703 Sum_probs=53.9
Q ss_pred HcCCCCC-CCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 002208 29 QLKCTRE-GLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALA 88 (953)
Q Consensus 29 ~l~~~~~-GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~ 88 (953)
.|+++.+ |||++|+++|+++||+|++++++ .++|..|+++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4667754 99999999999999999998875 788999999999999999999999998863
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.8e-09 Score=108.43 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=95.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+...+.+. ...++ ..-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 68999999999999975 99999999999999999999996322111111000 00000 0114578
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHh
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~g 639 (953)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999888888999999999999999999999997655555544444333 4566777766554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.1e-09 Score=117.42 Aligned_cols=131 Identities=19% Similarity=0.264 Sum_probs=98.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+..+ .+...... + -+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~v~g------~---iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGNVLG------D---IVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeEecC------c---cCCcc
Confidence 57899999999999999999999999988888999999985311100000000 00000000 0 02346
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
.|.+.++.+.++ .+.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 788888877654 35799999999999999999999999 88999999999999988998887665
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=108.92 Aligned_cols=153 Identities=25% Similarity=0.297 Sum_probs=103.3
Q ss_pred EEeecCCC-CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCcc-c-c---Ccccc-cc-------
Q 002208 485 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSAS-L-L---GQDKD-AS------- 549 (953)
Q Consensus 485 G~i~i~D~-lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~-l-~---~~~~~-~~------- 549 (953)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+.+|+..... .+.. + . +.... ..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999864211 0000 0 0 00000 00
Q ss_pred --------------------------------cCchhHHHHHHhcC--c-------EeecCHHH--HHHHHHHhccc---
Q 002208 550 --------------------------------IAALPVEELIEKAD--G-------FAGVFPEH--KYEIVKKLQER--- 583 (953)
Q Consensus 550 --------------------------------~~~~~~~~~~~~~~--v-------far~~P~~--K~~iV~~lq~~--- 583 (953)
...+++.+.+++.. + +..+.|.. |..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00011222222111 0 12333333 66666655433
Q ss_pred -CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 584 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 584 -g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
...++++||+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++..+++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 346999999999999999999999999999999999999998888888888774
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.6e-09 Score=108.55 Aligned_cols=144 Identities=21% Similarity=0.265 Sum_probs=98.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCc-cccCc-cc-------cc-------------
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSA-SLLGQ-DK-------DA------------- 548 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~-~l~~~-~~-------~~------------- 548 (953)
++.+.+.++|++|++.|+++.+.||.+...+..+++++++..... .+. .+... .. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999864211 000 00000 00 00
Q ss_pred --------------ccCc---hhHHHHHHhcCc-------EeecCH--HHHHHHHHHhccc----CCEEEEEcCCccCHH
Q 002208 549 --------------SIAA---LPVEELIEKADG-------FAGVFP--EHKYEIVKKLQER----KHICGMTGDGVNDAP 598 (953)
Q Consensus 549 --------------~~~~---~~~~~~~~~~~v-------far~~P--~~K~~iV~~lq~~----g~~V~~~GDG~ND~p 598 (953)
..+. +.+.+.+....+ +..++| -.|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 111222221111 112223 3677777776543 335899999999999
Q ss_pred hhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 599 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 599 aLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
|++.|++|+||++|.+.+|+.||+|..+++-.++..+
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987776666654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-08 Score=107.81 Aligned_cols=129 Identities=22% Similarity=0.281 Sum_probs=92.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee-cCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG-VFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~~P 570 (953)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- ........ +..... .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998641 11100000 000000 00001 112
Q ss_pred HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 571 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 571 ~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
+.|..+++.+.++ ...+.|+||+.||.+|++.|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3366666655443 245889999999999999999999985 567888899999999998877643
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-08 Score=92.20 Aligned_cols=65 Identities=31% Similarity=0.443 Sum_probs=54.1
Q ss_pred CCChHHHHHHHhcCC------hhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc
Q 002208 374 NQDAIDAAIVGMLAD------PKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA 439 (953)
Q Consensus 374 ~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 439 (953)
.++|+|.|++.++.. ....+..+++++.+||||++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 458999999887642 3456788999999999999999999998 3345677999999999999973
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.8e-08 Score=100.43 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=84.3
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe--ecCHHHHHHH
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA--GVFPEHKYEI 576 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa--r~~P~~K~~i 576 (953)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |. .-.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 589999999999999999999999999999998521 11 1225555566
Q ss_pred HHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCch
Q 002208 577 VKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 577 V~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~ 630 (953)
++.++-....|+++||+.||.+|++.|++++||+++.+.++..||+|...++=.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCC
Confidence 666655556799999999999999999999999999999999999998755543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.5e-08 Score=106.88 Aligned_cols=154 Identities=22% Similarity=0.228 Sum_probs=106.4
Q ss_pred EEeecCCC-CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC---------CCccc-------------
Q 002208 485 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY---------PSASL------------- 541 (953)
Q Consensus 485 G~i~i~D~-lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l------------- 541 (953)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... +...+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 34444444 88999999999999999999999999999999999999975211 00000
Q ss_pred --------------cCcc-----------c----------------c---------cccCchhHHHH---HHh-----cC
Q 002208 542 --------------LGQD-----------K----------------D---------ASIAALPVEEL---IEK-----AD 563 (953)
Q Consensus 542 --------------~~~~-----------~----------------~---------~~~~~~~~~~~---~~~-----~~ 563 (953)
.... . . .....+...+. +.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0 0 00000111111 111 11
Q ss_pred cE-------eecCHH--HHHHHHHHhccc-CC---EEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCch
Q 002208 564 GF-------AGVFPE--HKYEIVKKLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 564 vf-------ar~~P~--~K~~iV~~lq~~-g~---~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~ 630 (953)
.+ ..+.|. +|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+||++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 233333 577777776653 43 499999999999999999999999999999999999888889999
Q ss_pred hHHHHHHH
Q 002208 631 VIISAVLT 638 (953)
Q Consensus 631 ~i~~ai~~ 638 (953)
+|..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99988854
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.1e-08 Score=108.43 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=49.2
Q ss_pred CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 585 ~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-.++..+++
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 45899999999999999999999999999999999999998888888888774
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.6e-08 Score=102.73 Aligned_cols=145 Identities=24% Similarity=0.314 Sum_probs=98.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccc-cCc--c------cc-------------
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSASL-LGQ--D------KD------------- 547 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~~~--~------~~------------- 547 (953)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... +...+ ... . ..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643211 00000 000 0 00
Q ss_pred -----------c--------ccCchhHHHHHHhcC---------cEeecCH--HHHHHHHHHhccc----CCEEEEEcCC
Q 002208 548 -----------A--------SIAALPVEELIEKAD---------GFAGVFP--EHKYEIVKKLQER----KHICGMTGDG 593 (953)
Q Consensus 548 -----------~--------~~~~~~~~~~~~~~~---------vfar~~P--~~K~~iV~~lq~~----g~~V~~~GDG 593 (953)
. ..+.+...++++... .+..+.| ..|..-++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 000111122222111 1223333 3677766666543 3569999999
Q ss_pred ccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchh----HHHHH
Q 002208 594 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV----IISAV 636 (953)
Q Consensus 594 ~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~----i~~ai 636 (953)
.||.+|++.|++|+||+|+.+.+|+.||+|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999988777777 55554
|
catalyze the same reaction as SPP. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.9e-08 Score=110.33 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=53.1
Q ss_pred HHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE--eecCCCchhHHHHHH
Q 002208 573 KYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI--VLTEPGLSVIISAVL 637 (953)
Q Consensus 573 K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi--vl~~~~~~~i~~ai~ 637 (953)
|..-++.+.+. ...|+++|||.||.+||+.|+.||||+||.+.+|++||. |..+++-.++..+++
T Consensus 189 Kg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 189 KGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred hHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 55555555432 245999999999999999999999999999999999996 667777888887773
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.6e-08 Score=97.16 Aligned_cols=101 Identities=28% Similarity=0.348 Sum_probs=80.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~ 579 (953)
+|++|++.|+++.++||+....+..+.+++|+.... .+ ..-.|+-..++.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~------~~----------------------~~~k~~~~~~~~~~ 87 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY------QG----------------------QSNKLIAFSDILEK 87 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE------ec----------------------ccchHHHHHHHHHH
Confidence 999999999999999999999999999999985311 00 01123333444444
Q ss_pred hcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC
Q 002208 580 LQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 580 lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~ 628 (953)
+.-....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 88 LALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 4444567999999999999999999999999998999999999998664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.1e-08 Score=104.55 Aligned_cols=53 Identities=23% Similarity=0.245 Sum_probs=47.4
Q ss_pred CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC--EeecCCCchhHHHHHH
Q 002208 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD--IVLTEPGLSVIISAVL 637 (953)
Q Consensus 585 ~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD--ivl~~~~~~~i~~ai~ 637 (953)
..|+++|||.||.+||+.|+.||||+||++.+|++|| .|..+++-.++..+++
T Consensus 207 ~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 207 KDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 3589999999999999999999999999999999988 6777777788887774
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=98.59 Aligned_cols=118 Identities=19% Similarity=0.194 Sum_probs=84.6
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee-cC
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG-VF 569 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~~ 569 (953)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++....+.....++ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 679999999999999999999999999999999999999997532211111100 0000 12322 34
Q ss_pred HHHHHHHHHHhcc-cCC---EEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEe
Q 002208 570 PEHKYEIVKKLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623 (953)
Q Consensus 570 P~~K~~iV~~lq~-~g~---~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDiv 623 (953)
.+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+|++..... .+..|+..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~ 198 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVR 198 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHh
Confidence 4788888866554 354 59999999999999999999999974433 23344433
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.2e-07 Score=109.40 Aligned_cols=52 Identities=21% Similarity=0.368 Sum_probs=48.9
Q ss_pred EEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 586 ~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|+++|||.||.+||+.|+.||||+||.+.+|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999998888889888875
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-07 Score=101.15 Aligned_cols=146 Identities=20% Similarity=0.235 Sum_probs=99.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCcccc-C-------------------------
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSASLL-G------------------------- 543 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~l~-~------------------------- 543 (953)
..+.+.+.++|++++++|+++.+.||+....+..+..++++..... ....+. .
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3467899999999999999999999999999999999999863111 000000 0
Q ss_pred ----------------ccc--c------------------------------cccCchhHHHHH-------Hhc------
Q 002208 544 ----------------QDK--D------------------------------ASIAALPVEELI-------EKA------ 562 (953)
Q Consensus 544 ----------------~~~--~------------------------------~~~~~~~~~~~~-------~~~------ 562 (953)
... . ...+.+.+.++. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 0 000011111111 000
Q ss_pred -CcEeecCH--HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 563 -DGFAGVFP--EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 563 -~vfar~~P--~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
.-+-.++| -.|..-++.+.+. ...++++||+.||.+||+.|+.|+||+++++..++.||++....+-.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 01223334 3577777666542 3578999999999999999999999999999999999999988776787765
Q ss_pred H
Q 002208 636 V 636 (953)
Q Consensus 636 i 636 (953)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.8e-07 Score=96.68 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=47.0
Q ss_pred CCEEEEEcCCccCHHhhhhCCeeEEecCch---HHHhhc--c-CEeecCCCchhHHHHHHH
Q 002208 584 KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARGA--S-DIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 584 g~~V~~~GDG~ND~paLk~AdVGIamg~~t---~~a~~a--a-Divl~~~~~~~i~~ai~~ 638 (953)
...|.++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-.++..++++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 456999999999999999999999999987 478876 4 588888888888888753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.7e-07 Score=99.09 Aligned_cols=53 Identities=26% Similarity=0.418 Sum_probs=48.9
Q ss_pred CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 585 ~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|+++||+.||.+|++.|++|+|||++.+..|+.||+|..+++-.++..+++
T Consensus 216 ~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 45899999999999999999999999999999999999998888888888874
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.6e-07 Score=94.04 Aligned_cols=97 Identities=26% Similarity=0.343 Sum_probs=77.1
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHH
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVK 578 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~ 578 (953)
.+|+.|++.|+++.++||.....+..+++++|+... |.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCcHHHHHH
Confidence 699999999999999999999999999999998521 110 122333333
Q ss_pred H----hcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCC
Q 002208 579 K----LQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 627 (953)
Q Consensus 579 ~----lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~ 627 (953)
. +.-....|+|+||+.||.+|++.|+++++++++.+..+..||+++..+
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~ 155 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIA 155 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCC
Confidence 3 333345799999999999999999999999988888899999999643
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.2e-06 Score=91.65 Aligned_cols=127 Identities=20% Similarity=0.218 Sum_probs=89.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|+++ +++.++|+-....+..+.+++|+.... ........+ . .... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~-~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CHSLEVDED-G-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cceEEECCC-C-eEEC------------ccccccc
Confidence 4689999999999999 999999999999999999999985311 111000000 0 0000 0012377
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE-eecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI-VLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi-vl~~~~~~~i~~ai 636 (953)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 888999999888899999999999999999999999887544444445565 43 3455554433
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.6e-07 Score=96.71 Aligned_cols=64 Identities=25% Similarity=0.285 Sum_probs=53.2
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
.|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++++.+|+.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 366666665543 2469999999999999999999999999999999999999988777777654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=3e-06 Score=92.95 Aligned_cols=55 Identities=22% Similarity=0.166 Sum_probs=45.3
Q ss_pred CCEEEEEcCCccCHHhhhhCCeeEEecCch-H--H---HhhccCEeecCCCchhHHHHHHH
Q 002208 584 KHICGMTGDGVNDAPALKKADIGIAVADAT-D--A---ARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 584 g~~V~~~GDG~ND~paLk~AdVGIamg~~t-~--~---a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
...|+++|||.||.+||+.|++||||+++. + . .+..+|++....+-.++.+++++
T Consensus 206 ~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 206 RPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 356999999999999999999999998544 2 1 34579999988888888888754
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.4e-07 Score=92.31 Aligned_cols=117 Identities=26% Similarity=0.360 Sum_probs=83.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... ......... ..... -+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~--~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE--KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC--CCeEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997531 111111100 00000 0112234466
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 621 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD 621 (953)
.|.++++.+.++ .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 777777665443 34699999999999999999999999765555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.38 E-value=0.00023 Score=83.79 Aligned_cols=100 Identities=19% Similarity=0.273 Sum_probs=75.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5889999999999999999999999999999999999998321 111111 1135566
Q ss_pred HHHHHHHH-hcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHh
Q 002208 572 HKYEIVKK-LQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (953)
Q Consensus 572 ~K~~iV~~-lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~ 617 (953)
.|.+.++. +.++| +.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~~~--~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGERG--FDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCccC--eeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 67655443 33322 5789999999999999999999986554443
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.7e-06 Score=88.85 Aligned_cols=111 Identities=16% Similarity=0.083 Sum_probs=78.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc-cCcccccccCchhHHHHHHhcCcE--ee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL-LGQDKDASIAALPVEELIEKADGF--AG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~vf--ar 567 (953)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+.+... .+.......+. ...+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 478999999999999999999999999999999888887543332221111 11111000000 0000 00
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
-....|..+++.++.....|.|+|||.||.+|++.||+++|-+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 0124799999998888888999999999999999999988755
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.8e-06 Score=83.29 Aligned_cols=98 Identities=27% Similarity=0.435 Sum_probs=80.2
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHH
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVK 578 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~ 578 (953)
-.|+.+.++||+|-+|||.+......-|+++||..- ..| -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------~qG--------------------------~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------YQG--------------------------ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------eec--------------------------hHhHHHHHH
Confidence 369999999999999999999999999999999521 111 235655555
Q ss_pred Hhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC
Q 002208 579 KLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 579 ~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~ 628 (953)
.|.++ -.-|+++||..||.|+|++.+.++|+.++.+-.++.||+|+...+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~G 143 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKG 143 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccC
Confidence 44432 456999999999999999999999999999999999999987654
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.25 E-value=9.8e-06 Score=88.99 Aligned_cols=66 Identities=27% Similarity=0.338 Sum_probs=50.9
Q ss_pred HHHHHHHHhcc----cC-CEEEEEcCCccCHHhhhhCCeeEEecCchHHHh----hcc-CEee--cCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----GAS-DIVL--TEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~----~g-~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~----~aa-Divl--~~~~~~~i~~ai~ 637 (953)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+| .+| +.+. ..++-.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 44444444432 34 789999999999999999999999999999999 666 6776 4556677777764
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.2e-06 Score=90.26 Aligned_cols=92 Identities=24% Similarity=0.307 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH-H-
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE-H- 572 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~-~- 572 (953)
+++.+.|+.++++|++++++||+....+..+++.+|++........+.... +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 888899999999999999999999999999999999974211111110000 11235555555 4
Q ss_pred -HHHHHHHh------cccCCEEEEEcCCccCHHhhh
Q 002208 573 -KYEIVKKL------QERKHICGMTGDGVNDAPALK 601 (953)
Q Consensus 573 -K~~iV~~l------q~~g~~V~~~GDG~ND~paLk 601 (953)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455889999999999999996
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.3e-06 Score=82.58 Aligned_cols=101 Identities=24% Similarity=0.319 Sum_probs=75.2
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCC-CCCCcc-------ccCcccccccCchhHHHHHHhcCc
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN-MYPSAS-------LLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
+-|++++.++.|++.|.+|.++||--...+..+|.++||+.. .+.+.. ..|.+..+..
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt-------------- 154 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT-------------- 154 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc--------------
Confidence 569999999999999999999999999999999999999752 221111 1111111111
Q ss_pred EeecCHHHHHHHHHHhccc--CCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 565 FAGVFPEHKYEIVKKLQER--KHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 565 far~~P~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
+...-|.++++.+++. -..++|+|||+||.+|+.-||-=|+.+
T Consensus 155 ---sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ---SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ---ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 1123688999999874 457899999999999999976666654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.4e-05 Score=83.12 Aligned_cols=131 Identities=21% Similarity=0.307 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+ ....... .....+ .+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~------~~~~~~--~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFD------ENEPTS--RS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECcc------CCCccc--CC
Confidence 378999999999999999999999999999999999999963 221110000000 0000000 000001 12
Q ss_pred HHHHHHHHHhccc--CCEEEEEcCCccCHHhhhh--CCeeEEecCc--hHHHhhccCEeecCCCchhHHH
Q 002208 571 EHKYEIVKKLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 571 ~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~--AdVGIamg~~--t~~a~~aaDivl~~~~~~~i~~ 634 (953)
..|.+.++.+.++ ...+.|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 3466677666543 2568999999999999877 5666666532 2334556899884 4555443
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.4e-05 Score=82.17 Aligned_cols=113 Identities=17% Similarity=0.092 Sum_probs=75.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhH-HHHHHhcCcEee-c
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPV-EELIEKADGFAG-V 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~vfar-~ 568 (953)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+.... +... .-...+..++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~--~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFD--NDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceEC--CCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999999885321 1111 1111000 0000 000000001111 1
Q ss_pred CHHHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 569 FPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123589999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.9e-05 Score=82.36 Aligned_cols=110 Identities=16% Similarity=0.150 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCC-CCCCc-cccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN-MYPSA-SLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +... .+... .+.+......-+.....+ ....|
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~----~~~~~--- 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEH----CQNHC--- 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccc----ccccC---
Confidence 68999999999999999999999999999999999888 6431 11101 111111000000000000 00001
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
...|..+++.++.....|.|+|||.||.+|.+.||+.++-
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1248889998888877899999999999999999997774
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.4e-05 Score=81.48 Aligned_cols=101 Identities=22% Similarity=0.278 Sum_probs=70.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..- +....... .+...... ...-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~--~~g~~~g~--------~~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFD--DNGLLTGP--------IEGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEEC--CCCEEeCc--------cCCcccCCcc
Confidence 3689999999999999999999999999999999999998631 11110000 00000000 0000124567
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhC
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKA 603 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~A 603 (953)
.|...++.++++ ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.6e-05 Score=79.16 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=89.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ...+.+.... ...-.|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 458899999999999999999999999999999999999985321 1111111000 011123
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC----chHHHhhccCEeecCCCchhHHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~----~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
+--..+++.++.....+.++||+.||+.+.+.|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 33345666666666789999999999999999999 666642 2344455788887 667787776644
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.2e-05 Score=80.70 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=76.7
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
..+++|++.+.|+.+++.|+++.++||-....+..+++.+|+..- ......... +....+.. . --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~~--------~-~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGNI--------D-GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCCc--------c-CCCCC
Confidence 356899999999999999999999999999999999999998532 111111000 00000000 0 01234
Q ss_pred HHHHHHHHHHhcc-cC---CEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 570 PEHKYEIVKKLQE-RK---HICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 570 P~~K~~iV~~lq~-~g---~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
++.|.+.++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5778877766543 33 36899999999999999999999986
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.82 E-value=5.9e-05 Score=72.23 Aligned_cols=118 Identities=15% Similarity=0.064 Sum_probs=79.3
Q ss_pred ecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 488 ~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34468999999999999999999999999999999999999997421 0111100000000 00000000111123445
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhh-CCeeEE
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK-ADIGIA 608 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~-AdVGIa 608 (953)
-.|+.+..+.+.+......+.++||+.||.+|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 66777788888887777889999999999999998 555554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.73 E-value=8.6e-05 Score=80.35 Aligned_cols=147 Identities=16% Similarity=0.164 Sum_probs=94.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC--C-CC-ccc-cCc-c-cc----------------
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--Y-PS-ASL-LGQ-D-KD---------------- 547 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~-~~-~~l-~~~-~-~~---------------- 547 (953)
.+..|...++|+++++.|+.++..||......+.+.+++++..+. + .+ ..+ .++ . .+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456788999999999999999999999999999999999975431 1 00 000 000 0 00
Q ss_pred -----------------c-------ccCchh----H---HHHHHhc--Cc---Ee-----ecCH--HHHHHHHHHhccc-
Q 002208 548 -----------------A-------SIAALP----V---EELIEKA--DG---FA-----GVFP--EHKYEIVKKLQER- 583 (953)
Q Consensus 548 -----------------~-------~~~~~~----~---~~~~~~~--~v---fa-----r~~P--~~K~~iV~~lq~~- 583 (953)
. ....+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000001 1 1111111 11 11 2333 3577777776543
Q ss_pred ---CCEEEEEcCCccCHHhhhh-CCeeEEecCchHHHhhccC-------EeecCCCchhHHHHHH
Q 002208 584 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARGASD-------IVLTEPGLSVIISAVL 637 (953)
Q Consensus 584 ---g~~V~~~GDG~ND~paLk~-AdVGIamg~~t~~a~~aaD-------ivl~~~~~~~i~~ai~ 637 (953)
...|+++||+.||.+|++. ++.||+|+|+.+..++.+| ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 7799999999998886543 5555555667777664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00021 Score=75.80 Aligned_cols=126 Identities=19% Similarity=0.214 Sum_probs=93.7
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
..++-|+++++++.|+++|++..++|++....+..+.+..|+.... ..+.|.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 4567899999999999999999999999999999999999997532 111111100 012235
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCC---eeEEecC--chHHHhhccCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad---VGIamg~--~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
|+....+.+.+....+.++||||..||..|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 77777788887766558999999999999999998 6666663 4566676799998 4455655444
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00021 Score=74.77 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+++++|++.|+++.++||.....+...-+.+|+.... ...+...+ ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCc-----------------CCCCCCChH
Confidence 67899999999999999999999999999899888999985321 11111000 011233344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-e--c--CchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-m--g--~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=..+++.++-..+.++|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 4456666666566789999999999999999999643 3 3 22344566799987 4455555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0002 Score=76.34 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=39.1
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34555679999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00079 Score=71.34 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
+.+.++|++|+++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00075 Score=74.08 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=83.3
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... ...+.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478899999999999999999999999998888888888885321 1111111000 011122
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC----chHHHhhccCEeecCCCchhHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~----~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+-=..+.+.+.-....+.|+||+.||..|.++|++ .+++.. ..+..+..+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 22234445554445679999999999999999998 445532 2233445789888 4566665443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00016 Score=77.55 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=54.8
Q ss_pred HHHHHHHHhccc-C---CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC----EeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD----IVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD----ivl~~~~~~~i~~ai~~ 638 (953)
.|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++-.++.++|.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 466666666543 2 3588999999999999999999999999999999999 77766666788887743
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00061 Score=79.05 Aligned_cols=141 Identities=19% Similarity=0.172 Sum_probs=88.0
Q ss_pred HHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC---CCc--cccCc--------------------------
Q 002208 497 SAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY---PSA--SLLGQ-------------------------- 544 (953)
Q Consensus 497 v~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---~~~--~l~~~-------------------------- 544 (953)
..+++ +++++.|+..+..||.++.....+.++.++..+.+ .+. +..+.
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44555 88999999999999999999999999999865421 000 00000
Q ss_pred ---------cccc-------ccCchh-------HHHHHHh----cC------cEeecCHH--HHHHHHHHhccc------
Q 002208 545 ---------DKDA-------SIAALP-------VEELIEK----AD------GFAGVFPE--HKYEIVKKLQER------ 583 (953)
Q Consensus 545 ---------~~~~-------~~~~~~-------~~~~~~~----~~------vfar~~P~--~K~~iV~~lq~~------ 583 (953)
+.+. ..+... +.+.+.+ +. -+-.+.|. .|..-++.|.++
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 0000 000101 1111111 11 12244554 487777766543
Q ss_pred -CCEEEEEcCCccCHHhhhhCC-eeEEecCchHHHhhcc--------CEeec-CCCchhHHHHHH
Q 002208 584 -KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARGAS--------DIVLT-EPGLSVIISAVL 637 (953)
Q Consensus 584 -g~~V~~~GDG~ND~paLk~Ad-VGIamg~~t~~a~~aa--------Divl~-~~~~~~i~~ai~ 637 (953)
...|+++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +++-.+|..++.
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 347899999999999999999 6999999999888743 55544 334556666653
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00085 Score=70.47 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... ...+.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985321 1111111000 1112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe---cCc--hHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV---ADA--TDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam---g~~--t~~a~~aaDivl~~~~~~~i~ 633 (953)
-=....+.++.....++|+||..||..|.++|++-... |.+ .+.....+|+++ +++..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 33444555555556799999999999999999987543 211 122234688877 3344443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.001 Score=70.04 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=83.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+.... ...+ +.+.. -...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~-~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVI-TLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEE-ecCcC----------------CCCCCCcH
Confidence 37799999999999999999999999999999999999986421 1111 11100 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-e--cCc--hHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-m--g~~--t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--.++.+.++.....++|+||+.+|..|-++|++-.. + |.. .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 4445566665555679999999999999999998432 2 311 223344688876 4566666544
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00048 Score=75.32 Aligned_cols=131 Identities=10% Similarity=0.077 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHHHHh-cCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccc--Ccc-cccccC----------------
Q 002208 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL--GQD-KDASIA---------------- 551 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~--~~~-~~~~~~---------------- 551 (953)
.+-+++.++|++|++ .|+.++++||++........+.+++.---.+...+. +.. ....++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 899999999999999988887766420000000000 000 000000
Q ss_pred ------------------------chhHHHHH----HhcC--------cEeecCHH--HHHHHHHHhccc----CCEEEE
Q 002208 552 ------------------------ALPVEELI----EKAD--------GFAGVFPE--HKYEIVKKLQER----KHICGM 589 (953)
Q Consensus 552 ------------------------~~~~~~~~----~~~~--------vfar~~P~--~K~~iV~~lq~~----g~~V~~ 589 (953)
.+.+.++. +... .+-.+.|. +|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 01111111 1111 12233343 677666665433 357899
Q ss_pred EcCCccCHHhhhhC----CeeEEecCchHHHhhccCEeecC
Q 002208 590 TGDGVNDAPALKKA----DIGIAVADATDAARGASDIVLTE 626 (953)
Q Consensus 590 ~GDG~ND~paLk~A----dVGIamg~~t~~a~~aaDivl~~ 626 (953)
+||+.||.+|++.+ +.||+||++. ..|++.|.+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~ 232 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG 232 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC
Confidence 99999999999999 9999999875 357777754
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.002 Score=68.28 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=76.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-+|.|++.++++.|++.|+++.++|+........+.+++|+.... ...+.+... ...+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 467899999999999999999999999999999999999986432 111111100 0112223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCc---hHHHhhccCEee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARGASDIVL 624 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~---t~~a~~aaDivl 624 (953)
+-=..+.+.+.-..+.|+|+||..||+.+-++|++.... ..+ .+.-...+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 209 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL 209 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec
Confidence 322333344433345699999999999999999987654 222 222223567766
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0029 Score=66.84 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=81.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+....+-...+...+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 478999999999999999999999999999999999999986211111122111100 112223
Q ss_pred HHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeE--EecCch---H-HHhhccCEeecCCCchhHHH
Q 002208 571 EHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT---D-AARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 571 ~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGI--amg~~t---~-~a~~aaDivl~~~~~~~i~~ 634 (953)
+-=....+.+.-. ...++|+||+.+|+.+-++|++.. ++..|. + .....+|.++ +++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 3223344444433 367999999999999999999986 333322 1 2233577776 34444443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0082 Score=65.34 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------CCccccCcccccccCchhHHHHHH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------PSASLLGQDKDASIAALPVEELIE 560 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~ 560 (953)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... ....+.|.. . .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~-----P------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-G-----P------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-C-----C-------
Confidence 4689999999999999999999999999999999999999853211 011111110 0 0
Q ss_pred hcCcEeecCHHHHHHHHH-----Hhc--ccCCEEEEEcCCccCHHhhhhC---CeeEEec--Cc-----hHHHhhccCEe
Q 002208 561 KADGFAGVFPEHKYEIVK-----KLQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARGASDIV 623 (953)
Q Consensus 561 ~~~vfar~~P~~K~~iV~-----~lq--~~g~~V~~~GDG~ND~paLk~A---dVGIamg--~~-----t~~a~~aaDiv 623 (953)
-+....|.+.+. .++ .....|.++|||.||++|..-. +--+.+| +. -+.=+++=|||
T Consensus 187 ------~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 187 ------LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred ------cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 000123544333 222 2345788999999999996544 2233444 32 23456788999
Q ss_pred ecCCCchhHHHHH
Q 002208 624 LTEPGLSVIISAV 636 (953)
Q Consensus 624 l~~~~~~~i~~ai 636 (953)
|.+|.=-.++.+|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9988766666655
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0041 Score=66.38 Aligned_cols=122 Identities=15% Similarity=0.117 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... . .+.+.+. .....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~-~i~~~~~----------------~~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--A-VLIGGDT----------------LAERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--c-EEEecCc----------------CCCCCCCHH
Confidence 57899999999999999999999999998888888888875321 1 1111110 001223344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCc----h-HHHhhccCEeecCCCchhHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADA----T-DAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~----t-~~a~~aaDivl~~~~~~~i~~ 634 (953)
-=..+++.+.-....+.|+||+.||..|-+.|++... +..| . ......+|+++ +++..+..
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~ 222 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWN 222 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHH
Confidence 4456666676666789999999999999999998743 3221 1 12234588888 34555543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0038 Score=65.83 Aligned_cols=107 Identities=12% Similarity=0.053 Sum_probs=75.2
Q ss_pred CCCCCHHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... ..+.+.+.+....+. . .-..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 578889999999999999999999999996210 011121111100000 0 0123567
Q ss_pred HHHHHHHHHh-cccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 571 EHKYEIVKKL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 571 ~~K~~iV~~l-q~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
++|..-++.. .......-+-||..||.|||+.|+-++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877654 4445566789999999999999999999974
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0044 Score=74.56 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=39.3
Q ss_pred EEeecCCC-CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 485 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 485 G~i~i~D~-lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
|.+.-.|. .-+.+.++|++|+++|+.+++.||........+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3357899999999999999999999999999999999974
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0038 Score=65.79 Aligned_cols=107 Identities=12% Similarity=0.051 Sum_probs=74.4
Q ss_pred CCCCCHHHHHH-HHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+... ..+.+.+.+.. ++ .. . .=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~g---g~----~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NG---GW----V-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CC---ce----E-cCccCCC
Confidence 46899999996 78889999999999999999999999665321 01112211100 00 00 0 0123566
Q ss_pred HHHHHHHHHh-cccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 571 EHKYEIVKKL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 571 ~~K~~iV~~l-q~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
++|.+-++.. .......-+-||..||.|||+.||-.+++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888877644 3334456789999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0066 Score=66.06 Aligned_cols=42 Identities=7% Similarity=0.022 Sum_probs=38.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999864
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.011 Score=64.61 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++-||+.++++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+. ...+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcC-----------------CCCCCChH
Confidence 56799999999999999999999999998888877777764321 1111111110 01122333
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCe
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGVNDAPALKKADI 605 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdV 605 (953)
-=....+.+.-. ...++|+||+.+|+.+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 333444444433 3569999999999999999997
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0097 Score=64.84 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999999999985321 1222221110 1122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE-Ee-cCchHHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI-am-g~~t~~a~~aaDivl~~ 626 (953)
-=...++.++-....++|+||..+|+.|-++|++-. ++ +..+......+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 334455555555667999999999999999999843 33 32222233357877643
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.011 Score=63.90 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=69.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+.... ...++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999998999886431 11122111100 1122344
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
-=....+.+.-. .+.++|+||..+|..+-+.|++-.
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 334445555432 456999999999999999999753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.015 Score=63.89 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+..... .++.+.+ +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 577999999999999999999999999999999999999854211 1111110 00 0122
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCc--hH--HHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA--TD--AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~--t~--~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=..+++.++-....++|+||+.+|..+-++|++-... ..| +. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 22233344443455799999999999999999986432 222 22 2344689987 5566666544
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.003 Score=65.68 Aligned_cols=94 Identities=19% Similarity=0.107 Sum_probs=69.8
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+.... ...+.+. ++..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 4567788899999999999999999999999999999999986321 1111111 1112444
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhC
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~A 603 (953)
|+--..+.+.++-....|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 6655666777776677899999999999887765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.018 Score=62.25 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=81.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+-....+..+-+++|+.... ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 47799999999999999999999999999999999999986421 1222222111 1122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCc-h--HHHhhccCEeecCC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADA-T--DAARGASDIVLTEP 627 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~-t--~~a~~aaDivl~~~ 627 (953)
-=....+.++-....+.|+||..+|..|-++|++-.. +..+ . +.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 4455556666556779999999999999999998543 3222 1 22234688888554
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.011 Score=69.83 Aligned_cols=123 Identities=12% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999999985321 1112111100 011232
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC--chHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~--~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
-=....+.++ ...+.|+||..+|+.+-+.|++ .|++.. ..+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2222233332 3469999999999999999998 445532 2222234588887 456666665543
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.018 Score=60.98 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=75.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|++.|+++.++|+.....+...-+..|+... ...+.+.+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHh-----------------cCCCCCcH
Confidence 5789999999999999999999999887766666666776321 111111000 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCch-HHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t-~~a~~aaDivl~~ 626 (953)
-=....+.+.-....+.|+||..+|+.+-+.|++- |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33444555555567899999999999999999984 5564332 2233457777643
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.01 Score=61.93 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (953)
++.+++.++|++|++.|+++.++||........+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.017 Score=61.02 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+-+...+...-+++|+.... ..++.+.+. ....-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 57899999999999999999999999888888888888885321 111111110 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCe-eEEec
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 610 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdV-GIamg 610 (953)
-=..+.+.+.-....+.|+||.. +|+.+-++|++ .|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22344455544456799999998 99999999997 44554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.043 Score=56.45 Aligned_cols=142 Identities=20% Similarity=0.251 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccc-cccCch---------------hH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD-ASIAAL---------------PV 555 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~-~~~~~~---------------~~ 555 (953)
++-||+.++.+.|++. ...+++|--...-+..+|..+|++........+ +.+ ...+.+ +-
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~---~lD~~~~PeeeR~E~L~~~~~~~~~~g 158 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEV---DLDSIAVPEEEREELLSIIDVIASLSG 158 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccc---cCccccCChHHHHHHHHhcCccccccH
Confidence 3558999999999876 556677777778889999999985422111111 011 001111 11
Q ss_pred HHHHHhc-CcEeecCHHHHHHHHHHhccc------------------CCEEEEEcCCccCHHhhhhCC-e-eEEec-Cch
Q 002208 556 EELIEKA-DGFAGVFPEHKYEIVKKLQER------------------KHICGMTGDGVNDAPALKKAD-I-GIAVA-DAT 613 (953)
Q Consensus 556 ~~~~~~~-~vfar~~P~~K~~iV~~lq~~------------------g~~V~~~GDG~ND~paLk~Ad-V-GIamg-~~t 613 (953)
+++.++. ++|.|..|.+-.+|++..+.- ....+.+||.+.|+.||+.+. - |+|+. ||.
T Consensus 159 eelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 159 EELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 2222222 268888887655555555432 234688999999999999875 2 47887 888
Q ss_pred HHHhhccCEeecCCCchhHHHHHH
Q 002208 614 DAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 614 ~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
+-|..-||+.+..++.......|+
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 888889999999998887777663
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.036 Score=69.48 Aligned_cols=170 Identities=19% Similarity=0.210 Sum_probs=97.2
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEee--cCCCCCCCHHHHHHHHHh-cCCcEEEEcCCCHHHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLP--LFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 524 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~--i~D~lR~~v~~~I~~l~~-aGI~v~miTGD~~~tA~~ 524 (953)
+.....|...-.|.+++-+.. +++.... -...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 444556655556777765543 3332211 012366889999999999 699999999999988887
Q ss_pred HHHHhCCCC---C---CC-CCccc---c----------------------Ccccc---cc------cCchhH--------
Q 002208 525 TGRRLGMGT---N---MY-PSASL---L----------------------GQDKD---AS------IAALPV-------- 555 (953)
Q Consensus 525 ia~~lGi~~---~---~~-~~~~l---~----------------------~~~~~---~~------~~~~~~-------- 555 (953)
....+++.- | .. +.... . |...+ .. ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 765555310 0 00 00000 0 00000 00 000111
Q ss_pred HHHHHh----c--Cc-----EeecCH--HHHHHHHHHhccc--CCEEEEEcCCccCHHhhhhC---CeeEEecCchHHHh
Q 002208 556 EELIEK----A--DG-----FAGVFP--EHKYEIVKKLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 617 (953)
Q Consensus 556 ~~~~~~----~--~v-----far~~P--~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~A---dVGIamg~~t~~a~ 617 (953)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 01 112334 3688888777653 35799999999999999986 588888874 4
Q ss_pred hccCEeecCCCchhHHHHH
Q 002208 618 GASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 618 ~aaDivl~~~~~~~i~~ai 636 (953)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788988754 3444443
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.016 Score=64.54 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=78.0
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
..+++.+++.+++++|++.|+++.++||.....+..+.+.+|+..... ..+.+.+. ....+.. ..--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~-~~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQRE-QGDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhccc-CCCCCC
Confidence 568999999999999999999999999999999999999998853111 11111110 0000000 001244
Q ss_pred CHHHHHHHHHHhcc-cCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 569 FPEHKYEIVKKLQE-RKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 569 ~P~~K~~iV~~lq~-~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
.|+-+...++.+-. .-..++|+||..||+.+-+.|++-..
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 57778888877644 34789999999999999999998743
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.02 Score=59.40 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=66.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+++++|++.|+++.++|+-+......+.+++|+.... ..++...+. ....-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhhc-----------------CCCCCCHH
Confidence 57899999999999999999999998888888888999974321 111111100 01111222
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
-=..+.+.+.-....+.|+||+.+|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 223444555545567999999999999999988753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.015 Score=62.29 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=62.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCC----HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.|.+++.+.++.+++.|+++.++||.. ..|+..+.+..|+....+....+.+...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467889999999999999999999963 6699999999999422111111111100
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
.-.+|...++ +.| .+.|+||..+|..+-+.|++-
T Consensus 173 -~K~~K~~~l~---~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -GQYTKTQWLK---KKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCHHHHHH---hcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0123444433 334 489999999999999999875
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.01 Score=63.53 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=61.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.|.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... . ..+.+.+... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f-~~i~~~d~~~------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N-PVIFAGDKPG------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e-eEEECCCCCC------------------C
Confidence 34555999999999999999999998 67799999999999631 1 1222211110 0
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
-.| +|.. .+++.| ++.|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 1222 334444 479999999999999999874
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.027 Score=62.33 Aligned_cols=118 Identities=18% Similarity=0.116 Sum_probs=73.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+-+......+-+..+.......-..+.+.+. ....-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~-----------------~~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV-----------------PKKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc-----------------CCCCCCHH
Confidence 5789999999999999999999999887777666555432110000011111000 01222333
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCch--HHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~t--~~a~~aaDivl~~ 626 (953)
-=..+.+.+.-....++|+||+.+|+.|-++|++.... ..|. ......+|+++.+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 33455566655566799999999999999999987654 2332 1112357888743
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.018 Score=62.22 Aligned_cols=68 Identities=24% Similarity=0.278 Sum_probs=44.9
Q ss_pred HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHH-----Hhh---ccCEee-cCCCchhHHHHHH
Q 002208 571 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARG---ASDIVL-TEPGLSVIISAVL 637 (953)
Q Consensus 571 ~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~-----a~~---aaDivl-~~~~~~~i~~ai~ 637 (953)
..|..-|+.|+++ .+.|.++||+.||.+||..++-||.++|+.+. ... ...+.. ..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4688888888765 23577799999999999999999999988877 222 223333 3444556666664
Q ss_pred H
Q 002208 638 T 638 (953)
Q Consensus 638 ~ 638 (953)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.0098 Score=59.56 Aligned_cols=97 Identities=19% Similarity=0.169 Sum_probs=70.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.+++|++.|++++++|+-.........+++|+... ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 46889999999999999999999999999999999999998621 11222111110 111223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
+-=..+++.++-....+.++||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 333455666655667799999999999999998864
|
... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.056 Score=55.37 Aligned_cols=127 Identities=20% Similarity=0.121 Sum_probs=72.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
.+.||+.+++++|++.|+++.++|..... ....+-++.|+.. ...+...... .+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~----~~--- 97 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHP----ED--- 97 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCC----CC---
Confidence 36799999999999999999999987621 1112223345420 0111000000 00
Q ss_pred HHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCchH---HHhhcc--CEeecCCCch
Q 002208 557 ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARGAS--DIVLTEPGLS 630 (953)
Q Consensus 557 ~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~t~---~a~~aa--Divl~~~~~~ 630 (953)
......-.|+--..+.+.+.-..+.+.|+||..+|+.+-++|++..- +..|.. .....+ |+++ +++.
T Consensus 98 -----~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 98 -----GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred -----CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00012233444455666666566789999999999999999997432 223321 112234 7776 4455
Q ss_pred hHHHHH
Q 002208 631 VIISAV 636 (953)
Q Consensus 631 ~i~~ai 636 (953)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 555544
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.018 Score=58.82 Aligned_cols=94 Identities=13% Similarity=0.034 Sum_probs=61.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ...+.+.+. ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 45667778875321 111111100 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
-=....+.+.-....+.|+||..+|+.+-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22344444444445699999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.038 Score=53.36 Aligned_cols=92 Identities=15% Similarity=0.143 Sum_probs=65.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhc
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
-++.|++.++++.|+++|+++.++|+.. ......+.+++|+.... ....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-------------------
Confidence 3678999999999999999999999988 77788888888874211 00100
Q ss_pred CcEeecCHHHHHHHHHHhc-ccCCEEEEEcC-CccCHHhhhhCCe
Q 002208 563 DGFAGVFPEHKYEIVKKLQ-ERKHICGMTGD-GVNDAPALKKADI 605 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq-~~g~~V~~~GD-G~ND~paLk~AdV 605 (953)
.+.+-.|+-=..+.+.++ -....++|+|| -.+|+.+-++|++
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 011122333335556663 55677999999 5999999998876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.035 Score=59.07 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ..++.+.+.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeeeCC-----------------CCCCCHH
Confidence 57899999999999999999999998888888877778874321 1111111100 0111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee--EEecCc
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG--IAVADA 612 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG--Iamg~~ 612 (953)
-=....+.+.-....++|+||..+|+.+-+.|++. +++.++
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 22333455554556799999999999999999996 455443
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.045 Score=55.64 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 5555568874311 111111100 11222344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 605 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV 605 (953)
-=..+.+.+......+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 4445556665556789999999999999998877
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.043 Score=57.89 Aligned_cols=120 Identities=12% Similarity=0.062 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.+++|++. +++.++|+-....+..+-+++|+.... ..++...+. ...+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 5789999999999999 999999999888888888999985421 111111110 01112222
Q ss_pred HHHHHHHHh-cccCCEEEEEcCCc-cCHHhhhhCCe-eEEec--CchHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~l-q~~g~~V~~~GDG~-ND~paLk~AdV-GIamg--~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
-=...++.+ .-....+.|+||.. +|+.+=+++++ +|.+. ..+......+|+++ ++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~ 221 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELY 221 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHH
Confidence 223444555 43445799999998 89999999997 34443 22222223456665 3344443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.04 Score=56.16 Aligned_cols=99 Identities=10% Similarity=-0.000 Sum_probs=61.9
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCc
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
+-||+++++++|++.|+++.++|+.... .....-+..|+..-... ....+.+ ..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~-----------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC-PHKHGDG-----------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC-cCCCCCC-----------------CC
Confidence 6799999999999999999999987631 12222334555321000 0000000 00
Q ss_pred EeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 565 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 565 far~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
..+-.|+-=.++.+.+...-+.+.|+||..+|+.+=++|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 122334434555666655556799999999999999999986553
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.074 Score=60.69 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985321 1111111100 1122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCchHHH-hhccCEeec
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RGASDIVLT 625 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~t~~a-~~aaDivl~ 625 (953)
-=....+.++-....++|+||..+|+.|-+.|++-... ..+.+.. ...+|+++.
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR 332 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC
Confidence 33455666666677899999999999999999985433 3332222 235788763
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.022 Score=56.84 Aligned_cols=111 Identities=14% Similarity=0.060 Sum_probs=70.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
.++|+-++.++.+++.++.++++|+-..-....+=.+++=-..++.......... ......-.++.. .....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~---ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDY---IHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCce---EcCCCceeeecC---CccccCC
Confidence 4789999999999999999999998876666666655551111111111100000 000000000000 1123345
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+|...|+.+++..+.+.|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 7999999999999999999999999988887776655
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.034 Score=56.76 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=61.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+..-. ..++.+.... ...-.|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~~-----------------~~kp~~ 145 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEVK-----------------EGKPHP 145 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhCC-----------------CCCCCh
Confidence 368899999999999999999999987 5567777788875311 1111110000 111112
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
+-=..+.+.+.-..+.+.|+||..+|+.+-++|++.
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211233444444445688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.098 Score=52.44 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=65.8
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCccccCcccccccCchhHHHHHHh
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSASLLGQDKDASIAALPVEELIEK 561 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 561 (953)
+|.+.|++++++++++++|+++..+||.....+. ....++ | +.. ...+..... .+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~-------~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDR-------LFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCc-------chhh-hhc
Confidence 4778999999999999999999999999988774 444442 2 321 011110000 0000 000
Q ss_pred cCcEeecCHHHHHHHHHHhcc-----cCCEEEEEcCCccCHHhhhhCCee
Q 002208 562 ADGFAGVFPEHKYEIVKKLQE-----RKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 562 ~~vfar~~P~~K~~iV~~lq~-----~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
.+..+-.-+.|.+.++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 -e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11222222347777777665 457788999999999999987653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.069 Score=61.60 Aligned_cols=114 Identities=17% Similarity=0.154 Sum_probs=73.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH-HhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.... ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 467999999999999999999999998887776554 56764211 111111100 0112233
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCc--hHHHhhccCEee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARGASDIVL 624 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~--t~~a~~aaDivl 624 (953)
+-=..+++.+.-..+.|.|+||+.+|+.+-++|++... +..+ .......+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 33345555555556779999999999999999998743 3332 222333456654
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.013 Score=63.24 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=46.4
Q ss_pred HHHHHHHHHhcccCCEEEEEcC----CccCHHhhhhC-CeeEEecCchHHHhhccCEee
Q 002208 571 EHKYEIVKKLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARGASDIVL 624 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GD----G~ND~paLk~A-dVGIamg~~t~~a~~aaDivl 624 (953)
-+|..-++.|.+....|+++|| |.||.+||+.| -.|++++++++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 3688888888777788999999 99999999987 688888899999998876654
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.11 Score=54.88 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|+ .|+++.++|+.....+...-++.|+.... ..++.+.+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-----------------CCCCCCHH
Confidence 47899999999999 68999999998888888877888874311 111111100 01111232
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCc-cCHHhhhhCCee-EEec-CchH-HHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~-ND~paLk~AdVG-Iamg-~~t~-~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=..+++.+.-. ...+.|+||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 223444555432 35799999998 799999999985 4443 2221 1112467776 4455555443
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.089 Score=53.60 Aligned_cols=108 Identities=8% Similarity=-0.044 Sum_probs=68.1
Q ss_pred EeecCCCCCCCHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCc
Q 002208 486 LLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 486 ~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
...-.-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+...- . ...+....+ ..+
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~---~------------~~~~~~~Fd-~iv 102 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG---K------------TVPMHSLFD-DRI 102 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC---C------------cccHHHhce-eee
Confidence 33344568899999999999999999999965 888898888888874100 0 000000000 001
Q ss_pred EeecCHHHH--HHHHHHhccc------CCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 565 FAGVFPEHK--YEIVKKLQER------KHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 565 far~~P~~K--~~iV~~lq~~------g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
.+.-.+..| ..+.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 111111111 2344544432 35799999999999999999886654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.091 Score=51.92 Aligned_cols=100 Identities=17% Similarity=0.122 Sum_probs=60.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
++.|++.++++.|++.|+++.++|..+. .....+.+.+|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4789999999999999999999998662 34556677788742100000 0000000
Q ss_pred HHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 557 ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 557 ~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
.....-.|+-=..+++.+.-..+.+.|+||...|+.+-+.|++-.
T Consensus 97 ------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000111122223334444444567999999999999999887743
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.21 Score=50.96 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCC-CCCc-cccCcccccccCchhH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNM-YPSA-SLLGQDKDASIAALPV 555 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~-~~~~-~l~~~~~~~~~~~~~~ 555 (953)
+.|++.+++++|+++|+++.++|.-... ....+-.+.|+.-.. +... ...+.. ++
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~--------~~ 98 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVE--------EF 98 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccc--------cc
Confidence 5689999999999999999999976531 111222233332100 0000 000000 00
Q ss_pred HHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee--EEecCch---HHHhhccCEeec
Q 002208 556 EELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG--IAVADAT---DAARGASDIVLT 625 (953)
Q Consensus 556 ~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG--Iamg~~t---~~a~~aaDivl~ 625 (953)
. ....+..-.|+-=....+.+.-....+.|+||..+|+.+-++|++. |.+..|. ......+|+++.
T Consensus 99 ~----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 99 R----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred c----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 0 0000111223332344444444456789999999999999999995 3443332 122234788873
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.12 Score=53.65 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=60.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++...+. .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999976554 46667777774221 111111000 01112232
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCee
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIG 606 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVG 606 (953)
-=..+++.+.-....++|+||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22334444444456799999997 899998888753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.14 Score=52.07 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=72.3
Q ss_pred HHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHhCCC
Q 002208 454 YAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMG 532 (953)
Q Consensus 454 ~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 532 (953)
+.+.|.+.+.+-... ++. ..=...+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888776432 111 00123578999999999999999999999987 57777888888763
Q ss_pred CCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCee
Q 002208 533 TNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIG 606 (953)
Q Consensus 533 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVG 606 (953)
.. .+ ...-.|+-=..+.+.+.-....++|+||.. .|..+-+.|++-
T Consensus 85 ~~-------~~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-------PH---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-------cC---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 11 00 001112211233344443455699999998 799999999884
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.082 Score=52.31 Aligned_cols=91 Identities=22% Similarity=0.218 Sum_probs=59.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+..+++.+.++.|++.|+++.++|+-....+...-+.. +... ...++ +.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~-~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLIL-GSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEE-ecC-----------------CCCCCcCHH
Confidence 34579999999999999999999999988888877775 3221 11111 110 011122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 604 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad 604 (953)
-=..+.+.+.-.. .++|+||..+|+.+-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 3334444444445 7999999999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.16 Score=51.16 Aligned_cols=101 Identities=13% Similarity=-0.014 Sum_probs=60.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
++-|++.+++++|++.|+++.++|.- .......+-+.+|+.-+ ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC----CC---
Confidence 46689999999999999999999974 23455666777777410 111110000 00
Q ss_pred HHHHhcCc-EeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 557 ELIEKADG-FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 557 ~~~~~~~v-far~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
+. +..-.|+-=..+++.+.-....+.|+||+.+|..+-++|++-...
T Consensus 98 ------~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------NCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 00 111112211233333333345699999999999999999886543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.25 Score=52.25 Aligned_cols=101 Identities=13% Similarity=0.099 Sum_probs=59.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHH-HHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE-TGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.||+.+.|+.|++.|+++.++||-....... .-+..|+... ....+.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhh---------------ccCCCCCc
Confidence 577999999999999999999999987653332 2222233210 01111111000 00011122
Q ss_pred HHHHHHHHHhc---ccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 571 EHKYEIVKKLQ---ERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 571 ~~K~~iV~~lq---~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
+-=...++.+. -..+.+.|+||...|+.|-++|++-...
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 22234444443 3346799999999999999999986543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.16 Score=50.31 Aligned_cols=98 Identities=14% Similarity=0.014 Sum_probs=65.5
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
.-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... ....++.+.+ +.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d-------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDE-------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcc-------------------ccccC
Confidence 3457999999999998 5799999999999999999999987431 1111121111 01111
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
|. =.+..+.+......|.|+||..+|..+-++|.|-|..
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 21 0111233444456899999999999998888665543
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.47 Score=51.73 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=57.1
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---AKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
..++-|++.+.++.+++.|+++.++|+..... +...-++.|+..... .. ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d~-----------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--EH-----------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--ce-----------------------EEe
Confidence 35678999999999999999999999977433 334456677753110 11 122
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhh
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk 601 (953)
|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 11112344445555555668999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.72 Score=60.14 Aligned_cols=127 Identities=15% Similarity=0.136 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
.+-||+.+.++.|+++|+++.++|+-....+..+-++.|+..... ...+...+.. ...-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~~~-----------------~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADAFE-----------------NLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcccc-----------------cCCCCHH
Confidence 367999999999999999999999999888888888899852111 1111111100 1112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCc---hHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~---t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=....+.+.-....+.|+||..+|+.|-+.|++ -|++..+ .+.....+|+++.+..--++...+
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 3334556665556779999999999999999998 3444322 233445678888554333344443
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.41 Score=51.04 Aligned_cols=103 Identities=20% Similarity=0.289 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHH--HhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC---CCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNM---YPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 492 ~lR~~v~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
|+.|+.++.++.+ ++.|+.+.++|-=|..--..+=+.-|+.... +.+....... ..+.-... ....|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~--G~l~v~py-----h~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDAD--GRLRVRPY-----HSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCC--ceEEEeCc-----cCCCCC
Confidence 5778999999999 5689999999999988888888888885321 1111110000 00000000 012355
Q ss_pred ecCH-HHHHHHHHHhccc----C---CEEEEEcCCccCH-Hhhh
Q 002208 567 GVFP-EHKYEIVKKLQER----K---HICGMTGDGVNDA-PALK 601 (953)
Q Consensus 567 r~~P-~~K~~iV~~lq~~----g---~~V~~~GDG~ND~-paLk 601 (953)
++.| .=|..+++.+++. | ..|.++|||.||- |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 5555 4799999988765 4 6899999999995 5553
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.65 Score=46.21 Aligned_cols=110 Identities=13% Similarity=0.163 Sum_probs=75.1
Q ss_pred HHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 450 IIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 450 ~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
..+.+..+|.+.+.+-..+ +++..= ....-|++.+=+.+++.+|+++.++|.-++.-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998875543 333221 1335578888899999999999999999999999999999
Q ss_pred CCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhc---ccCCEEEEEcCCc-cCHHhhhhCCe
Q 002208 530 GMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQ---ERKHICGMTGDGV-NDAPALKKADI 605 (953)
Q Consensus 530 Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq---~~g~~V~~~GDG~-ND~paLk~AdV 605 (953)
|++-- +--..|-- ..+-++++ -.-+.|+|+||-. .|+-+=+.|++
T Consensus 84 ~v~fi------------------------------~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 84 GVPFI------------------------------YRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CCcee------------------------------ecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 98520 11111221 13344444 4456899999996 67776666654
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.25 E-value=1.1 Score=48.17 Aligned_cols=94 Identities=16% Similarity=0.218 Sum_probs=59.2
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHH--HHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhc
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. ...+++|+..+. ...++... ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~---------~~------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSG---------EI------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccH---------HH-------
Confidence 555566788999999999999999999999985544333 455778875311 11111100 00
Q ss_pred CcEeecCHHHHHHHHHHhcc---cCCEEEEEcCCccCHHhhhhCC
Q 002208 563 DGFAGVFPEHKYEIVKKLQE---RKHICGMTGDGVNDAPALKKAD 604 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq~---~g~~V~~~GDG~ND~paLk~Ad 604 (953)
. ..-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 -------~--~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------A--VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------H--HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0 0112222222 3567999999999999886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.35 Score=54.83 Aligned_cols=101 Identities=10% Similarity=-0.040 Sum_probs=60.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPV 555 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~ 555 (953)
-+|.|++.+++++|+++|+++.++|+- ....+..+.+..|+.. ...+.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----cc--
Confidence 467899999999999999999999982 1334555666777631 1111110000 00
Q ss_pred HHHHHhcCcEee-cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 556 EELIEKADGFAG-VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 556 ~~~~~~~~vfar-~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+..+| ..|+-=..+.+.+.-....+.|+||+.+|..+-+.|++-..
T Consensus 99 -------~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 -------NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00111 11221122333333345679999999999999998887543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.46 E-value=0.46 Score=50.41 Aligned_cols=99 Identities=14% Similarity=0.086 Sum_probs=66.3
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhC---CCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
.-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +... . ...+ + ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f-~~~f-----d--------------~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-F-SGYF-----D--------------TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-c-ceEE-----E--------------eCccc
Confidence 35789999999999999999999999988776666655542 2110 0 0000 0 00111
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2233333455666655556799999999999999999986544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.8 Score=44.10 Aligned_cols=93 Identities=11% Similarity=0.052 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|.. . .. .+ +.+.... .+.++-.|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~-~----~i-~~-----------l~~~f~~-~~~~~~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF-G----II-FP-----------LAEYFDP-LTIGYWLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc-c----cc-hh-----------hHhhhhh-hhhcCCCc
Confidence 68999999999999999999999999 787777776766610 0 00 00 0000000 01111113
Q ss_pred --HHHHHHHHHhc--ccCCEEEEEcCCccCHHhhhh
Q 002208 571 --EHKYEIVKKLQ--ERKHICGMTGDGVNDAPALKK 602 (953)
Q Consensus 571 --~~K~~iV~~lq--~~g~~V~~~GDG~ND~paLk~ 602 (953)
+.=....+.+. -....++|+||...|..++++
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 32234444554 445789999999988777654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.24 Score=53.35 Aligned_cols=63 Identities=21% Similarity=0.221 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhC--------CeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~A--------dVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+...+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 44566666555432 45799999999999999999 4788886342 4567899885 444454444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.76 Score=46.49 Aligned_cols=93 Identities=8% Similarity=-0.009 Sum_probs=57.1
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCH------------HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 560 (953)
+-||+.+++++|+++|+++.++|.-.. .....+-+.+|+.. ...+.+.. .
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~-~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA-G------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC-C-------------
Confidence 348999999999999999999996543 23456677788742 11111110 0
Q ss_pred hcCcEeecCHHHHHHHHHHhc--ccCCEEEEEcCCc--------cCHHhhhhCCee
Q 002208 561 KADGFAGVFPEHKYEIVKKLQ--ERKHICGMTGDGV--------NDAPALKKADIG 606 (953)
Q Consensus 561 ~~~vfar~~P~~K~~iV~~lq--~~g~~V~~~GDG~--------ND~paLk~AdVG 606 (953)
.+..-.|+-=..+.+.+. -....+.||||.. +|..+-++|++-
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 011111222233444443 2345699999986 699988888764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.71 E-value=0.29 Score=51.25 Aligned_cols=98 Identities=14% Similarity=0.041 Sum_probs=58.6
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH--HHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
-++.|++.+.++.|++.|+++.++|...... ........|+.... ..++...+ .....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeee-----------------cCCCCC
Confidence 3678999999999999999999999865432 22222223332110 00110000 001122
Q ss_pred CHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
.|+-=..+.+.+.-....++|+||...|+.+=++|++-.
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 233323444555544566999999999999999998843
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=90.60 E-value=0.5 Score=50.20 Aligned_cols=87 Identities=22% Similarity=0.269 Sum_probs=54.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHH---HHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
-|+-|++.+.++.+++.|++|+++||........+ =++.|...- ....+.+.. + . ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~-d-----~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLE-D-----S------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCC-C-----C------------Cc
Confidence 47889999999999999999999999997552222 234565421 111111100 0 0 00
Q ss_pred cCHHHHHHHHHHhcccCC-EEEEEcCCccCH
Q 002208 568 VFPEHKYEIVKKLQERKH-ICGMTGDGVNDA 597 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~-~V~~~GDG~ND~ 597 (953)
-.-+-|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011226666666666654 778999999885
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.11 E-value=1.7 Score=45.07 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.9
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
.+...+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888889886
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.28 E-value=1 Score=46.74 Aligned_cols=97 Identities=10% Similarity=0.010 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.++++.|++.|+++.++|.-+.......- +..++.... ..++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEeccc-----------------CCCCCCH
Confidence 47899999999999999999999987655433221 112332110 001110000 0011122
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
+-=..+.+.+.-....+.|+||...|+.+-++|++-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2223445555555567999999999999999998854
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.07 E-value=0.9 Score=47.90 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=63.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||++++++.| ++++.++|+.....+...=++.|+.... ...++.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4668999999988 4999999999888888777778875321 11111111000 0111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
-=....+.+.-..+.|+|+||..+|+.+=++|++....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33344444444445699999999999999999987753
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=89.05 E-value=1.7 Score=55.30 Aligned_cols=37 Identities=8% Similarity=0.029 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHHH-HhcCCcEEEEcCCCHHHHHHHHHH
Q 002208 492 PPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 492 ~lR~~v~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 528 (953)
.|-+++.+++++| ++.|+.|.++||.+..+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 788999999999999888776644
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.9 Score=44.77 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=66.2
Q ss_pred CCCCCHHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHhCCCCC---CC--CCccccCcccccccCchhHHHHHHhcCcE
Q 002208 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTN---MY--PSASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~---~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
|.-|+..++|+.+++.|- .++++|--|.--...+-+..|+..- +. |...=..+.+.-.... .-.-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH--------~~hsC 155 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH--------TQHSC 155 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC--------CCCcc
Confidence 567999999999999997 9999999887777777777776320 00 1000000000000000 00224
Q ss_pred eecCHH-HHHHHHHHhcccC-------CEEEEEcCCccCH-HhhhhCCeeEEe
Q 002208 566 AGVFPE-HKYEIVKKLQERK-------HICGMTGDGVNDA-PALKKADIGIAV 609 (953)
Q Consensus 566 ar~~P~-~K~~iV~~lq~~g-------~~V~~~GDG~ND~-paLk~AdVGIam 609 (953)
.++.|. =|..++..++..+ ..+..+|||.||. |+++...--+||
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 454443 3666666554321 2789999999994 888877666666
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.66 E-value=0.87 Score=52.11 Aligned_cols=61 Identities=23% Similarity=0.221 Sum_probs=43.0
Q ss_pred HHHHHHHHhccc-C-----C-EEEEEcCCccCHHhhhh-----CCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~-g-----~-~V~~~GDG~ND~paLk~-----AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+|..-|+.+-+. | . .++++||+.||..|++. +++||+|++|... ..|++.|.+ -..+...+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HHHHHHHH
Confidence 787777766543 2 1 35899999999999996 6899999876543 357888754 34444444
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=85.64 E-value=2 Score=48.17 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=39.1
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (953)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977777776 456663
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.24 E-value=1.3 Score=45.23 Aligned_cols=98 Identities=12% Similarity=0.074 Sum_probs=64.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+++++|+ .++.++|.-....+...-+++|+.... ..++...+.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999997 479999999888889999999985321 111111100000 000122333
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
-=..+++.+......++|+||...|+.+=++|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 334556666666678999999999999988887643
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.06 E-value=2.1 Score=43.76 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=61.6
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHH
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHK 573 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K 573 (953)
-| ..++++.|++. ++..++||.....+..+-++.|+.... ..++...+. ...+-.|+-=
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~ 148 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTF 148 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHH
Confidence 35 46899999865 899999999999999999999985321 111211110 0112223333
Q ss_pred HHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 574 YEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
....+.++.....|.++||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444555554455688999999999999999874
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=84.97 E-value=2.4 Score=42.85 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=74.3
Q ss_pred HHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCc--EEEEcCC-------CHHHHHH
Q 002208 454 YAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIAKE 524 (953)
Q Consensus 454 ~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 524 (953)
+.+.|.|.+.+-..+- + ...=++.+-|+..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDNT-------------L--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNT-------------L--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCCC-------------C--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 6678888887754431 0 0123577889999999999999875 9999986 4788999
Q ss_pred HHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhccc-----CCEEEEEcCCc-cCHH
Q 002208 525 TGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQER-----KHICGMTGDGV-NDAP 598 (953)
Q Consensus 525 ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~-----g~~V~~~GDG~-ND~p 598 (953)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 02223565556777777654 56799999974 5665
Q ss_pred hhhhCC
Q 002208 599 ALKKAD 604 (953)
Q Consensus 599 aLk~Ad 604 (953)
+=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 544433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=83.59 E-value=13 Score=42.33 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=30.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (953)
.+-++..++|++|. .|+.+.++||..........
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 36688999999999 78999999999999888873
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=83.50 E-value=2.3 Score=47.78 Aligned_cols=95 Identities=16% Similarity=0.052 Sum_probs=68.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH----hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
++.+++.++++.|++.|+++.++|.-+...|..+-++ +|+..... .+ .+.-.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~---~~---------------------~~~~~ 86 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD---AR---------------------SINWG 86 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee---EE---------------------EEecC
Confidence 4578999999999999999999999999999998887 66642110 00 00011
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
-.|+.=.++.+.+.-.-..++|+||...|..+.+.+..++.+-
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2233334445555444578999999999999999998887553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=80.03 E-value=4.4 Score=41.82 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=54.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC--CCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+.... +-...+.+.. . ...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------------~-~~k 132 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------------D-ESK 132 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------C-ccc
Confidence 47899999999999875 56777764444444344556653210 0011111100 0 011
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhC--CeeEE
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA--DIGIA 608 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~A--dVGIa 608 (953)
|+--..+++.++ ...++|+||..+|+.+-++| ++-..
T Consensus 133 p~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 133 EKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred HHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 332223334443 34688999999999999999 88543
|
2 hypothetical protein; Provisional |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 953 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-121 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-40 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-39 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-38 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 3e-37 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-25 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-25 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-25 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-25 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-21 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-21 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 8e-18 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 3e-16 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-07 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 1e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 4e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 5e-07 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-05 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 7e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 953 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-143 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-141 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 9e-69 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-53 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 9e-48 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-47 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-42 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-33 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 3e-29 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-29 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 2e-26 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 6e-19 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 5e-18 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-16 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 1e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 5e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 2e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 2e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 5e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 6e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 7e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1264 bits (3272), Expect = 0.0
Identities = 781/881 (88%), Positives = 830/881 (94%)
Query: 7 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFL 66
SLE+IKNETVDLE+IPIEEVF+QLKC+REGL++ EG +R+QIFGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 67 GFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAA 126
GFMWNPLSWVME AA+MAIALANG+G+PPDWQDFVGI+CLLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 127 ALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALT 186
ALMAGLAPKTK+LRDGKWSE+EAAILVPGDI+SIKLGDIIPADARLLEGDPLKVDQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 187 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 246
GESLPVTK+PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 247 IGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSIA+GM++EIIVMYPIQ RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLA 366
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+EVF KGVEKD V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 367 ARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRAS 426
A ASR ENQDAIDAA+VGMLADPKEARAGIREVHF PFNPVDKRTALTYID G+WHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 427 KGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486
KGAPEQIL L A DL KKV +IIDKYAERGLRSLAVARQ VPE+TKESPG PW+FVGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDK 546
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606
DA++A++PVEELIEKADGFAGVFPEHKYEIVKKLQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 607 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 666
IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 667 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAL 726
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLGGY A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 727 MTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLER 786
MTVIFFWA H+TDFF D FGVR+IRD+ HE+M A+YLQVSI+SQALIFVTRSRSWS++ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 787 PGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846
PG LL+ AF+IAQL+ATLIAVYANW FA+I+G+GWGWAGVIWLYSIV Y PLDV KFAIR
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 847 YILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLH 887
YILSGKAWLNL ENKTAFT KKDYGKEEREAQW H
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1110 bits (2872), Expect = 0.0
Identities = 313/889 (35%), Positives = 481/889 (54%), Gaps = 45/889 (5%)
Query: 3 DKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKI 62
D + EE + T R+ E++ + TR GL+S E R + +G N+++E+KE+
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 63 LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAG 122
LKFLGF P+ +VME AAV+A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 123 NAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDP-LKVD 181
+ L LA K +LRDG E EA +VPGDI+ ++ G IIPAD R++ D L+VD
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHF 240
QSALTGESL V K+ GD+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 300
+VL IG + + +L+ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKD 360
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKLS+ GV+ +
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 361 HVMLLAARASRTENQ--DAIDAAIVGMLADPKEARAGIRE---VHFFPFNPVDKRTALTY 415
+ML A A+ + + DAID A + L A++ + + + F PF+PV K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 416 IDSDGHWHRASKGAPEQILALCNAK----EDLKKKVHAIIDKYAERGLRSLAVARQEVPE 471
G KGAP +L E++ + + ++A RG RSL VAR+
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 472 RTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531
G W+ +G++P DPPRHD+ +T+ A LG+++KM+TGD + IA+ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 532 GTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTG 591
GTN+Y + L + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 592 DGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
DGVNDAP+LKKAD GIAV ++DAAR A+DIV PGL II A+ TSR IF RM Y +
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
Query: 652 YAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLK 711
Y ++++I + I + +V+ IAI D + I+ D S P W L
Sbjct: 694 YRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLP 753
Query: 712 EIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQA 771
+++ V+LG LA+ T I M+ I + M L+LQ+S+
Sbjct: 754 KLWGMSVLLGVVLAVGTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENW 807
Query: 772 LIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYS 831
LIF+TR+ + P L A + ++AT ++ G+ IW++S
Sbjct: 808 LIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIW---GWFEHSDTSIVAVVRIWIFS 864
Query: 832 IVFYVPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWA 880
+ + + + ++ + + NL+ K+ +K E+
Sbjct: 865 FGIFCIMGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFVVSLQ 910
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 452 bits (1166), Expect = e-143
Identities = 208/1002 (20%), Positives = 382/1002 (38%), Gaps = 177/1002 (17%)
Query: 4 KAISLEEIKNET-VDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEE-KKES 60
+ LE +K E ++ ++ + E+ ++ + + +GLS++ A L GPN L +
Sbjct: 38 RKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTP 97
Query: 61 KILKFLGFMWNPLSWVMEAAAVMAIALA---NGEGKPPDWQDFV-GIVCLLV--INSTIS 114
+ +KF + L +M AA + + EG + + + V +
Sbjct: 98 EYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFG 157
Query: 115 FIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLE 174
+ +E + N A+ + + ++RDG + A LV GD++ +K GD +PAD R+L+
Sbjct: 158 YYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQ 217
Query: 175 GDPLKVDQSALTGESLPVTK-------NPGDE---VFSGSTCKQGEIEAVVIATGVHTFF 224
KVD S+LTGES P T+ +P + F + C +G + +V+ TG T
Sbjct: 218 AQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTII 277
Query: 225 GKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRD 276
G+ A L ++ HF ++ + +I G I+ M +
Sbjct: 278 GRIASLASGVENEKTPIAIEIEHFVDIIAGL------AILFGATFFIVAM--CIGYTFLR 329
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 336
+ + +++ +P + ++V +++ + RL+ + + K + A+E + V+CSDKTG
Sbjct: 330 AMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTG 389
Query: 337 TLTLNKLSV-----DKNLIEVFAKGVEKD--------------HVMLLAARASRTENQ-- 375
TLT N+++V D ++ + V+ L RA+ Q
Sbjct: 390 TLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDA 449
Query: 376 ----------DAIDAAIVGM----LADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGH 421
DA + A++ L + R +V PFN +K + D
Sbjct: 450 VPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPR 509
Query: 422 WHRA---SKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQE 468
R KGAPE++L C++ E ++ G R L +
Sbjct: 510 DPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLY 569
Query: 469 VPERTKESPGGPWQ-----------FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 517
+ E+ F GL+ + DPPR + + + G+ V M+TGD
Sbjct: 570 LSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGD 629
Query: 518 Q----LAIAKETG--------RRLGMGTNMYPSASLLGQDKDAS------IAALPVEELI 559
AIA G P + +D A + + EL+
Sbjct: 630 HPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELV 689
Query: 560 EKADG-----FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADA-T 613
E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+ A +
Sbjct: 690 EALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGS 749
Query: 614 DAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS------ITIRIVFGFMFI 667
DAA+ A+D++L + + I++ V R IF +K Y ++ ++I
Sbjct: 750 DAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPY-----LIYI 804
Query: 668 ALIWKFDFSPFMVLIIAILNDGT-------------IMTIS-KDRVKPSPLPDSWKLKEI 713
+ +L I + D IM + ++ + + +
Sbjct: 805 TVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSY 864
Query: 714 FATGVVLGGYLALMTVIFFWAMHETDFFPDK-----------------------FGVRAI 750
F G + +F AM + +FP +
Sbjct: 865 FQIGAIQS---FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQR 921
Query: 751 RDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGL---LLVTAFVIAQLVATLIAV 807
++ ++ + + A + + ++R S ++ +LV A ++ Q+
Sbjct: 922 LYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIA-IVFQVCIGCFLC 980
Query: 808 YA---NWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846
Y F + + W V + ++ +V ++ K +R
Sbjct: 981 YCPGMPNIF-NFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 447 bits (1152), Expect = e-141
Identities = 211/1006 (20%), Positives = 377/1006 (37%), Gaps = 182/1006 (18%)
Query: 2 GDKAISLEEIKNET-VDLERIPIEEVFEQLKCTRE-GLSSTEGANRLQIFGPNKLEE-KK 58
DK L+E+K E +D ++ ++E+ + GL++ L GPN L
Sbjct: 31 IDKKRDLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPT 90
Query: 59 ESKILKFLGFMWNPLSWVMEAAAVMAIAL------ANGEGKPPDWQDFVGIVCLLVINST 112
+ +KF ++ S ++ A++ E + V + ++++
Sbjct: 91 TPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150
Query: 113 ISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARL 172
S+ +E + + + + ++RDG+ S A +V GD++ +K GD IPAD R+
Sbjct: 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRI 210
Query: 173 LEGDPLKVDQSALTGESLPVTK-------NPGDE---VFSGSTCKQGEIEAVVIATGVHT 222
+ KVD S+LTGES P T+ NP + F + C +G VV+ TG T
Sbjct: 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRT 270
Query: 223 FFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKY 274
G+ A L ++ HF ++T + ++ +G+ I+ + Y
Sbjct: 271 VMGRIATLASGLEVGRTPIAIEIEHFIHIITGV------AVFLGVSFFILSLI----LGY 320
Query: 275 RDGIDNLLV---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331
++ ++ +++ +P + ++V + + + R++++ + K + A+E + +C
Sbjct: 321 -SWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTIC 379
Query: 332 SDKTGTLTLNKLSV-----DKNLIEVFAKGVEKD--------------HVMLLAARASRT 372
SDKTGTLT N+++V D + E + + L RA
Sbjct: 380 SDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQ 439
Query: 373 ENQ------------DAIDAAIVGM----LADPKEARAGIREVHFFPFNPVDKRTALTYI 416
Q DA ++A++ + R ++ PFN +K +
Sbjct: 440 AGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHE 499
Query: 417 DSDGHWHR---ASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLA 463
+ R KGAPE+IL C+ KED+K+ + G R L
Sbjct: 500 NEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLG 559
Query: 464 VARQEVPER-----------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVK 512
+PE P FVGL+ + DPPR + + + + G+ V
Sbjct: 560 FCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVI 619
Query: 513 MITGDQ----LAIAKETG--------RRLGMGTNMYPSASLLGQDKDAS------IAALP 554
M+TGD AIAK G P + +D A + L
Sbjct: 620 MVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLS 679
Query: 555 VEELIEKADG-----FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609
E L + FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+
Sbjct: 680 TEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 739
Query: 610 ADA-TDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS------ITIRIVF 662
+ +D ++ A+D++L + + I++ V R IF +K Y ++
Sbjct: 740 GISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF---- 795
Query: 663 GFMFIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWK 709
+FI +L I + D IM K L +
Sbjct: 796 -LVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERL 854
Query: 710 LKEIFATGVVLGGYLALMTVI-FFWAMHETDFFPDK----------------------FG 746
+ + +G AL +F + E F P
Sbjct: 855 ISMAY---GQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQW 911
Query: 747 VRAIRDSEHEMMAALYLQVSIVSQ-ALIFVTRSRSWSYLERP--GLLLVTAFVIAQLVAT 803
R + +V Q A + + ++R S ++ +L+
Sbjct: 912 TYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEE-TALA 970
Query: 804 LIAVYA---NWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846
Y + R+ + W + YS++ ++ ++ +F IR
Sbjct: 971 AFLSYCPGTDVAL-RMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 247 bits (632), Expect = 9e-69
Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 38/361 (10%)
Query: 22 PIEEVFEQLKCTRE-GLSSTEGANRLQIFGPNKL-EEKKESKILKFLGFMWNPLSWVMEA 79
EE + GL+ + L+ +G N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 80 AAVMAIALA---NGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKT 136
AA ++ LA GE + + I+ +L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 137 KLLRDGKWSEEE--AAILVPGDIISIKLGDIIPADARLL--EGDPLKVDQSALTGESLPV 192
K+ R + S + A +VPGDI+ + +GD +PAD R+L + L+VDQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 193 TKNP----------GDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN---- 235
K+ D+ +FSG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 236 ----QVGHFQKVLT-AIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIG--- 287
++ F + L+ I C+ + + P+ + G + +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINIGH---FNDPVHGGSWIRGAIYYFKIAVALAV 305
Query: 288 -GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 346
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N++SV
Sbjct: 306 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365
Query: 347 K 347
K
Sbjct: 366 K 366
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 3e-53
Identities = 130/555 (23%), Positives = 209/555 (37%), Gaps = 92/555 (16%)
Query: 365 LAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHR 424
L + + + + + A R +++ F+ K ++ +
Sbjct: 449 LVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAA 508
Query: 425 AS-----KGAPEQILALCNAK----------EDLKKKVHAIIDKY--AERGLRSLAVARQ 467
KGAPE ++ CN +K+K+ ++I ++ LR LA+A +
Sbjct: 509 VGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 568
Query: 468 EVPERTKESPGGPWQ----------FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 517
+ P + +E FVG++ + DPPR + +I+ + G+ V MITGD
Sbjct: 569 DTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGD 628
Query: 518 QLAIAKETGRRLGMGTNMYPSA--SLLGQDKDASIAALPVEELIEKADG---FAGVFPEH 572
A RR+G+ A + G++ LP+ E E FA V P H
Sbjct: 629 NKGTAIAICRRIGIFGENEEVADRAYTGRE----FDDLPLAEQREACRRACCFARVEPSH 684
Query: 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVI 632
K +IV+ LQ I MTGDGVNDAPALKKA+IGIA+ T A+ AS++VL + S I
Sbjct: 685 KSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTI 744
Query: 633 ISAVLTSRAIFQRMKNYTIYAVS------ITIRIVFGFMFIALIWKFDFSPFMVLIIAIL 686
++AV RAI+ MK + Y +S + I F+ AL P +L + ++
Sbjct: 745 VAAVEEGRAIYNNMKQFIRYLISSNVGEVVCI-----FLTAALGLPEALIPVQLLWVNLV 799
Query: 687 NDGT-------------IMTISKDRVKP----SPLPDSWKLKEIFATGVVLGGYLALMTV 729
DG IM P PL W + +GGY+ TV
Sbjct: 800 TDGLPATALGFNPPDLDIM-----DRPPRSPKEPLISGWLFFRY----MAIGGYVGAATV 850
Query: 730 -IFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPG 788
W + P L + F P
Sbjct: 851 GAAAWWFMYAEDGP------------GVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPM 898
Query: 789 LLLVTAFVIAQLVATLIAVYAN-----WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843
+ ++ V ++ L ++ N + + L+ ++ YV M F
Sbjct: 899 TMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIF 958
Query: 844 AIRYILSGKAWLNLL 858
++ L WL +L
Sbjct: 959 KLKA-LDLTQWLMVL 972
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 9e-48
Identities = 138/549 (25%), Positives = 219/549 (39%), Gaps = 119/549 (21%)
Query: 120 NAGNAAAALMAGLAPKT-KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ GL KT ++RDGK + GDI+ ++ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 179 KVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 226
VD+S ++GE +PV K+ GDEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 227 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLV 283
L D +V +F + T + +A+ I Y I H L+
Sbjct: 315 PPIQRLAD---KVVAYF--IPTVLL------VAI---SAFIYWYFIAHAPLLFAFTTLIA 360
Query: 284 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
+L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 361 VLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 340 LNKLSVDKNLIEVFAKGVEKDHVMLLAARA-SRTENQDAIDAAIVGMLADPKEARAGIRE 398
K V ++ ++ ++ LAA A R+E+ A AIV +A
Sbjct: 417 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV--------KKALEHG 462
Query: 399 VHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK------EDLKKKVHAIID 452
+ +K + G G + + N + + +V ++
Sbjct: 463 I---ELGEPEKVEVIA-----GE------GVVADGILVGNKRLMEDFGVAVSNEVELALE 508
Query: 453 KYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVK 512
K ++ VAR + G++ + D + + ++ +G+ V
Sbjct: 509 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555
Query: 513 MITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572
MITGD A+ R L ++ +I A V P
Sbjct: 556 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 585
Query: 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVI 632
K E VKKLQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 586 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 644
Query: 633 ISAVLTSRA 641
++A+ SR
Sbjct: 645 VAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 6e-47
Identities = 138/555 (24%), Positives = 222/555 (40%), Gaps = 119/555 (21%)
Query: 120 NAGNAAAALMAGLAPKT-KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ GL KT ++RDGK + GDI+ ++ G+ IP D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 179 KVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 226
VD+S ++GE +PV K+ GDEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 227 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLV 283
L D +V +F + T + +A+ I Y I H L+
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL------VAI---SAFIYWYFIAHAPLLFAFTTLIA 282
Query: 284 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 283 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
Query: 340 LNKLSVDKNLIEVFAKGVEKDHVMLLAARA-SRTENQDAIDAAIVGMLADPKEARAGIRE 398
K V ++ ++ ++ LAA A R+E+ A AIV E + E
Sbjct: 339 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV---KKALEHGIELGE 389
Query: 399 VHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK------EDLKKKVHAIID 452
+ G G + + N + + +V ++
Sbjct: 390 PEKV--------EVIA-----GE------GVVADGILVGNKRLMEDFGVAVSNEVELALE 430
Query: 453 KYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVK 512
K ++ VAR + G++ + D + + ++ +G+ V
Sbjct: 431 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477
Query: 513 MITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572
MITGD A+ R L ++ +I A V P
Sbjct: 478 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 507
Query: 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVI 632
K E VKKLQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 508 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 566
Query: 633 ISAVLTSRAIFQRMK 647
++A+ SR ++K
Sbjct: 567 VAAIQLSRKTMSKIK 581
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 5e-42
Identities = 141/578 (24%), Positives = 215/578 (37%), Gaps = 164/578 (28%)
Query: 122 GNAAAALMAGLAPKT--KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLK 179
G+A AL+ L P++ ++ DG E + GD++ ++ G+ IP D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 180 VDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 239
VD+S +TGE +PV K + V+ AT NQ G
Sbjct: 271 VDESMVTGEPIPVAKEASAK--------------VIGAT---------------INQTGS 301
Query: 240 FQKVLTAIGNFCICSIAVGMLVEIIVM--------YPIQHRKYRDGIDNLLV-------- 283
F +G + ML I+ M PIQ + D + V
Sbjct: 302 FVMKALHVG-------SDTMLARIVQMVSDAQRSRAPIQ--RLADTVSGWFVPAVILVAV 352
Query: 284 ------LLIGGIP------IAMPTVL--------------SVTMAIGSHRLSQQGAITKR 317
L+G P IA +VL S+ + +G + +Q G + K
Sbjct: 353 LSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVG--KGAQSGVLIKN 410
Query: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVM-LLAARASRTENQD 376
A+E M ++ L DKTGTLT + + +D+ + L AA ++E+
Sbjct: 411 AEALERMEKVNTLVVDKTGTLTEGHPKL----TRIVTDDFVEDNALALAAALEHQSEHPL 466
Query: 377 AIDAAIVGMLADPKEARA-GIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILA 435
A AIV A+ G+ V+ A T G +A
Sbjct: 467 A--NAIV------HAAKEKGL------SLGSVEAFEAPT-----GKGVVGQVD--GHHVA 505
Query: 436 LCNAK--EDLK---KKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLF 490
+ NA+ ++ + D+ +G + +A + V LL +
Sbjct: 506 IGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552
Query: 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASI 550
DP + + ETI G+ + M+TGD A+ LG
Sbjct: 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG-------------------- 592
Query: 551 AALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610
I+K A + PE K IV +L+++ I M GDGVNDAPAL KADIGIA+
Sbjct: 593 --------IKKV--VAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG 642
Query: 611 DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
TD A ++ + L L I A S + M N
Sbjct: 643 TGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 8e-33
Identities = 80/335 (23%), Positives = 130/335 (38%), Gaps = 71/335 (21%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARA-SRTEN 374
+ A E + + DKTGTLT + V ++ +D ++ +AA +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 375 QDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQIL 434
A AAIV A R V++ A+ G +
Sbjct: 58 PIA--AAIV--------EEAEKRGF---GLTEVEEFRAIP-----GKGVEGIVN--GRRY 97
Query: 435 ALCNAK--EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDP 492
+ + +L K ++K ++G + + + + G++ L D
Sbjct: 98 MVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAA 552
R +S E I + +G+ M+TGD +AK LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 553 LPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADA 612
++ FA V P K E VK++Q++ M GDGVNDAPAL +AD+GIA+
Sbjct: 183 ------LDDY--FAEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGAG 233
Query: 613 TDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
TD A +DIVL + + V SR + +
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 3e-29
Identities = 83/345 (24%), Positives = 135/345 (39%), Gaps = 79/345 (22%)
Query: 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARA 369
+ G + K A+E + + DKTGTLT K V ++ ++ ++ LAA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 370 -SRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKG 428
R+E+ A AIV +A + +K + G G
Sbjct: 71 ERRSEHPIA--EAIV--------KKALEHGI---ELGEPEKVEVIA-----GE------G 106
Query: 429 APEQILALCNAK------EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQ 482
+ + N + + +V ++K ++ VAR +
Sbjct: 107 VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------R 153
Query: 483 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL 542
G++ + D + + ++ +G+ V MITGD A+ R L
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------ 201
Query: 543 GQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 602
++ +I A V P K E VKKLQ K + GDG+NDAPAL +
Sbjct: 202 ------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQ 242
Query: 603 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 243 ADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 3e-29
Identities = 34/166 (20%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
I++ ++ + PE K I++KL++ + M GDGVNDA AL
Sbjct: 175 -----------------IQEY--YSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 602 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+ +A+ + D ++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-26
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 902 SSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
+++ EL+++AE+AKRRAE+AR RELHTLKGHVESVVKLKGLDI+TIQQ Y +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 82.1 bits (204), Expect = 6e-19
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 124 AAAALMAGLAPKT-KLLRDGKWSEEEAAI--LVPGDIISIKLGDIIPADARLLEGDPLKV 180
A L+ GL KT ++RDGK E + + GDI+ ++ G+ IP D ++EG+ V
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-V 57
Query: 181 DQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGV 220
D+S ++GE +PV K+ GDEVF + G + + AT V
Sbjct: 58 DESMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 5e-18
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 120 NAGNAAAALMAGLAPKT-KLLRDGK----WSEEEAAI--LVPGDIISIKLGDIIPADARL 172
A A L+ L ++ SEE+ + + GDII + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 173 LEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGV 220
+EG VD+S +TGE++PV K PG V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 3e-16
Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 354 AKGVEKDHVMLLAARASRTENQ--DAIDAAIV--GMLADPKEARAGIREVHFFPFNPVDK 409
G + V+ A S + + +D A++ + + +++ PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 410 RTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGL 459
R ++ ++ H KGA ++IL +C+ + + +K+ + D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 460 RSLAVARQEVPERTKESPGGPWQ---FVGLLPLFDPPRH 495
R +AVA + +P R + G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 1e-14
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 924 RELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
RELHTLKGHVE+VVKLKGLDI+TIQQ Y +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 1e-08
Identities = 76/575 (13%), Positives = 156/575 (27%), Gaps = 161/575 (28%)
Query: 421 HWHRASKGAPEQILALCNAK--EDLKKKVHAIID-KYAERGLRSLAVARQEVPERTKESP 477
H H E + D K + +S ++++E+
Sbjct: 3 HHHHMDFETGEH--QYQYKDILSVFEDAFVDNFDCKDVQDMPKS-ILSKEEIDHIIMS-- 57
Query: 478 GGPWQFVGLLPLFDPPRHDSAETIRRALN--LGVNVKMITGDQLAIAKETGRRLGMGTNM 535
G L LF E +++ + L +N K + I E R+ M T M
Sbjct: 58 --KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRM 111
Query: 536 YPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKH-----ICGMT 590
Y + + A V + ++ + L E + I G+
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSR------------LQPYLKLRQALLELRPAKNVLIDGVL 159
Query: 591 GDG--------VNDAPALKKADIGI---AVADATDAARGASDIVLTEPGLSVIISAVLTS 639
G G K D I + + ++ L I TS
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTS 215
Query: 640 RAIFQRMKNYTIYAVSITIRIVFGFMF----IAL----------IWK-FDFS-PFMVL-- 681
R+ N + SI + L W F+ S ++
Sbjct: 216 RS--DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 682 ---IIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHET 738
+ L+ T IS D + PD ++K + +
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLK----------------YLDCRP 315
Query: 739 DFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALI-FVTRSRSWSYLERPGLLLVTAFVI 797
P E++ ++SI+++++ + +W ++ L + +
Sbjct: 316 QDLP------------REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 798 AQLVATLI-AVYANWGFARIKGVGWGWAGVIWLYSIVF----YVPLDVMKFAIRYILSGK 852
L ++ + VF ++P ++ ++
Sbjct: 364 NVLEPAEYRKMF--DRLS------------------VFPPSAHIPTILLS-----LI--- 395
Query: 853 AWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAE 912
W +++++ K + E Q + ++ + Y EL
Sbjct: 396 -WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--------------YLEL----- 435
Query: 913 QAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTI 947
+ ++ LH + V+ K D D +
Sbjct: 436 ----KVKLENEYALH--RSIVDHYNIPKTFDSDDL 464
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 72/526 (13%), Positives = 143/526 (27%), Gaps = 187/526 (35%)
Query: 23 IEEVFEQ-----LKC------TREGLSSTE------GANRLQ----IFGPNKLEEKKESK 61
I VFE C + LS E + + +F L K+E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW--TLLSKQEEM 78
Query: 62 ILKFLGFMWNP-LSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENN 120
+ KF+ + ++M E + P T +IE+ +
Sbjct: 79 VQKFVEEVLRINYKFLMSPIKT--------EQRQPS-------------MMTRMYIEQRD 117
Query: 121 AGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDI--------ISIKLGDIIPADARL 172
+L D + + ++ + L ++ PA L
Sbjct: 118 ----------------RLYNDNQ-------VFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 173 LEGDPL--KVDQSALTGESL---PVTKNPGDEVF--SGSTCKQGEIEAVVIATGVHTFFG 225
++G K + + + V ++F + C E ++ ++
Sbjct: 155 IDGVLGSGK---TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 226 KAAHLVD-STNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVL 284
D S+N + + ++ + Y + LLVL
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRL------------------LKSKPYENC---LLVL 250
Query: 285 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344
L + + + L +T R + D L + T ++L+ S
Sbjct: 251 L----NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHS 295
Query: 345 V---DKNLIEVFAKGVEKD--------------HVMLLAAR----ASRTEN-----QDAI 378
+ + + K ++ + ++A + +N D +
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 379 DAAIVGMLA--DPKEARAGIREVHFFPFN---PVDKRTALTYIDSDGHWHRASKGAPEQI 433
I L +P E R + FP + P + + W K +
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI--------WFDVIKSDVMVV 407
Query: 434 LALC--------NAKE----------DLKKK------VHA-IIDKY 454
+ KE +LK K +H I+D Y
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 5e-06
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 626
K V + ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 627 PG 628
G
Sbjct: 142 SG 143
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 29/132 (21%), Positives = 45/132 (34%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
IR AL + V +ITG + + ++ LG + L
Sbjct: 62 IRCALTSDIEVAIITGRKAKLVEDRCATLG------------------------ITHL-- 95
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
+ G +K L E+ I GD + D P ++K + +AVADA
Sbjct: 96 ----YQGQ--SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLL 149
Query: 617 RGASDIVLTEPG 628
+D V G
Sbjct: 150 IPRADYVTRIAG 161
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 626
+ K +K+ E + I G+ VND P +AVA A D RGA+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 627 PG 628
PG
Sbjct: 145 PG 146
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
I+ + GV +I+G + AI + + LG+ +++ DK + L ++L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DK---LVVL--DKLLA 104
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGAS 620
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 621 DIVLTEPG 628
+ G
Sbjct: 147 HGITRAQG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
I+ ++ + V +++G I + LG+ + +K A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFFLGKL----EK---ETAC--FDLMK 93
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGAS 620
+ AGV E GD D PA AVADA + A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 621 DIVLTEPG 628
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 32/132 (24%), Positives = 45/132 (34%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
I A N G+ V ++TG++ I + +L V+ L
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLK------------------------VDYL-- 73
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
F GV K ++L I GD +NDA LK+ I A A
Sbjct: 74 ----FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYI 127
Query: 617 RGASDIVLTEPG 628
R S I L + G
Sbjct: 128 RRLSTIFLEKRG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
I+ +G+ + +I+G A + LG+ +Y + K + E++ E
Sbjct: 45 IKLLQKMGITLAVISGRDSAPLITRLKELGV-EEIYTGSY----KK---LEIY--EKIKE 94
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGAS 620
K + E G GD V D +KK +AV +A + R +
Sbjct: 95 K----YSLKDEE--------------IGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVA 136
Query: 621 DIVLTEPG 628
+ G
Sbjct: 137 VYITQRNG 144
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
IR + ++V +ITG + + ++ LG+ T++Y S DK + A EL+
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLGI-THLYQGQS----DK---LVAY--HELLA 134
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGAS 620
PE GD + D P + + + +AVADA +
Sbjct: 135 T----LQCQPEQ--------------VAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKA 176
Query: 621 DIVLTEPG 628
V G
Sbjct: 177 HYVTRIKG 184
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 30/129 (23%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQ-DKDASIAALPVEELI 559
++ +N G+ + +ITG + I + + LG+ + +Y GQ DK + A ++
Sbjct: 61 VKALMNAGIEIAIITGRRSQIVENRMKALGI-SLIY-----QGQDDK---VQAY--YDIC 109
Query: 560 EKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGA 619
+K + PE G GD + D P ++K + + VAD
Sbjct: 110 QK----LAIAPEQ--------------TGYIGDDLIDWPVMEKVALRVCVADGHPLLAQR 151
Query: 620 SDIVLTEPG 628
++ V G
Sbjct: 152 ANYVTHIKG 160
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560
++ + G+ V +IT Q A+ +LG +
Sbjct: 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLG------------------------ITHY-- 88
Query: 561 KADGFAGVFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
+ G K + L++ + GD + D P +++ +G+AV++A
Sbjct: 89 ----YKGQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQV 142
Query: 617 RGASDIVLTEPG 628
+D G
Sbjct: 143 LEFADWRTERTG 154
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 6/110 (5%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEEL 558
E + + +I+G + +Y + + D +
Sbjct: 84 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 143
Query: 559 IEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608
G K ++ +L E M GD V D A K +D+ A
Sbjct: 144 CSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 624 LTEPGLSVII 633
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
+ K EI++K+ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 624 LTEPGLSVII 633
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
V + K +I+ L ++ + GDG ND + A +G+A A +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 624 LTEPGLSVII 633
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 953 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.87 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.37 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.27 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.19 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.16 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.13 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.1 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.06 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.03 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.0 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.99 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.92 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.91 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 98.88 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.85 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.81 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.79 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.72 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.72 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.69 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.67 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.66 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.65 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.64 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.62 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.61 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.6 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.6 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.58 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.58 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.48 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.47 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.45 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.42 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.4 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.26 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.26 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.25 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.24 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.22 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.21 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.2 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.19 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.19 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.17 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.14 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.14 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.14 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.13 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.08 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.07 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.06 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.05 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.03 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.03 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.03 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.02 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.0 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.98 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.95 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.94 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.93 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.91 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.88 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.85 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.84 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.82 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.82 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.81 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.74 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.73 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.73 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.7 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.69 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.68 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.67 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.67 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.67 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.66 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.64 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.64 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.63 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.62 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.62 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.6 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.6 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.59 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.59 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.54 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.5 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.49 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.44 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.43 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.38 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.26 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.16 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.16 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.01 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.89 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.81 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.8 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.77 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.7 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.68 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.6 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.59 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.54 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.49 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.45 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.4 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.36 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.21 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.73 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.61 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.58 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.49 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.37 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.29 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.17 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.16 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.62 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.58 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.53 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.56 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 93.48 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.41 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 92.89 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.29 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 90.67 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.3 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 88.69 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 87.98 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 86.08 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 83.96 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 81.18 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-150 Score=1390.89 Aligned_cols=881 Identities=89% Similarity=1.355 Sum_probs=743.7
Q ss_pred ccchhhhcccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHH
Q 002208 5 AISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMA 84 (953)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~ 84 (953)
|.++++.+++..|+|.+|.+|+++.|+++.+|||++|+++|+++||+|++++++++.|+.|+++|++|++++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis 80 (885)
T 3b8c_A 1 MSSLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMA 80 (885)
T ss_dssp -----------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGG
T ss_pred CcchhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788889999999999999999999999899999999999999999999998888899999999999999999999999
Q ss_pred HHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCC
Q 002208 85 IALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGD 164 (953)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd 164 (953)
++++...+.+.+|.++++|+++++++.+++++||+|+++++++|+++.+++++|+|||++++|++++|||||+|.|++||
T Consensus 81 ~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd 160 (885)
T 3b8c_A 81 IALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGD 160 (885)
T ss_dssp GGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSC
T ss_pred HHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCC
Confidence 98765555566899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCCcHHHHH
Q 002208 165 IIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 244 (953)
Q Consensus 165 ~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~~lq~~~ 244 (953)
+|||||+|++|++++||||+|||||.||.|.+||++|+||.|.+|+++++|++||.+|++||+++++++..+++++|+.+
T Consensus 161 ~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~ 240 (885)
T 3b8c_A 161 IIPADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 240 (885)
T ss_dssp CCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTT
T ss_pred EEeeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHH
Confidence 99999999999888999999999999999999999999999999999999999999999999999998777889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhh
Q 002208 245 TAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 324 (953)
Q Consensus 245 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~L 324 (953)
++++++++..+++++++.+++.|...+.+|.+++..++++++++|||+||+++++++++|+.+|+|+|+++|+++++|+|
T Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~L 320 (885)
T 3b8c_A 241 TAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 320 (885)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHH
Confidence 99988755444433333233344444567888999999999999999999999999999999999999999999999999
Q ss_pred cCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecC
Q 002208 325 AGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPF 404 (953)
Q Consensus 325 g~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF 404 (953)
|++|+||||||||||+|+|+|.+..+..+..++++++++.+++.++...++||++.|++.++.++.+.+..++.++.+||
T Consensus 321 g~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF 400 (885)
T 3b8c_A 321 AGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPF 400 (885)
T ss_dssp TTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCC
T ss_pred hCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccC
Confidence 99999999999999999999986543334456778888888888887667799999999998876666677888999999
Q ss_pred CCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEE
Q 002208 405 NPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFV 484 (953)
Q Consensus 405 ~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~ll 484 (953)
+|.+|||++++++.+|+.+.++|||||.++++|+.+++.++.+++.+++++++|+|++++|++++++.+.+..|++++|+
T Consensus 401 ~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~l 480 (885)
T 3b8c_A 401 NPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFV 480 (885)
T ss_dssp CTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCC
T ss_pred CcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEE
Confidence 99999999988777788888999999999999986555667788889999999999999999999877777889999999
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCc
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
|+++++||||||++++|++|+++||+|+|+|||++.||.++|+++||..+..+...+.|.+.+..+++.++++.+++.++
T Consensus 481 Gli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v 560 (885)
T 3b8c_A 481 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADG 560 (885)
T ss_dssp EEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCC
T ss_pred EEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcE
Confidence 99999999999999999999999999999999999999999999999876555667777776666788899999999999
Q ss_pred EeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHH
Q 002208 565 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQ 644 (953)
Q Consensus 565 far~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~ 644 (953)
|||++|+||.++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||++||+|+++++|++|+.++++||++|+
T Consensus 561 ~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ 640 (885)
T 3b8c_A 561 FAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQ 640 (885)
T ss_dssp EECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHH
Q 002208 645 RMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYL 724 (953)
Q Consensus 645 ~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~G~~~ 724 (953)
||++|+.|++++|+.+++.+++..++++++++|++++|+++++|+.++++++|+++|+++|++|..++++.++++.|+++
T Consensus 641 ni~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~ 720 (885)
T 3b8c_A 641 RMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQ 720 (885)
T ss_dssp HHHHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHH
Confidence 99999999999999776666666667889999999999999999999999999999999999999988888888899999
Q ss_pred HHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHH
Q 002208 725 ALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATL 804 (953)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~ 804 (953)
++.++++|++++..++++..++.+...++..+.++++|+..+++.++++|++|+++++|+++|++++++++++..++.++
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (885)
T 3b8c_A 721 AIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATL 800 (885)
T ss_dssp HHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTS
T ss_pred HHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHH
Confidence 99998887766544444443443221112345667777777777778899999999999999987777776666666666
Q ss_pred HHHhhcccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchhHHHhhhccccccccccCChhhHHHHHHHhhh
Q 002208 805 IAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQR 884 (953)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (953)
+++|.++.|+++.+++|.||+++|+++++++++.|+.|++.|+.+++.+|+++++++.+++.+++++.++|+.+|+.++.
T Consensus 801 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (885)
T 3b8c_A 801 IAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSH 880 (885)
T ss_dssp SSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC------------------------------------
T ss_pred HHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhccccccccccccccc
Confidence 66776667767889999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred h
Q 002208 885 T 885 (953)
Q Consensus 885 ~ 885 (953)
.
T Consensus 881 ~ 881 (885)
T 3b8c_A 881 H 881 (885)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-134 Score=1246.36 Aligned_cols=823 Identities=38% Similarity=0.609 Sum_probs=703.4
Q ss_pred HHHcCCC-CCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHH
Q 002208 27 FEQLKCT-REGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVC 105 (953)
Q Consensus 27 ~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~ 105 (953)
.+.|+++ .+|||++|+++|+++||+|++++++++.|..|+.+|++|++++|+++++++++++ +|.++++|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHH
Confidence 4457876 5799999999999999999999888999999999999999999999999998864 8999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCC-eEEeecC
Q 002208 106 LLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDP-LKVDQSA 184 (953)
Q Consensus 106 ~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~-l~Vdes~ 184 (953)
++++|++++++||+++++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 8999999
Q ss_pred CCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 185 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMLVEI 263 (953)
Q Consensus 185 LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~i~~~~~~~~ 263 (953)
|||||.||.|.+||++|+||.+.+|.+.++|++||.+|++||++++++++. +++++|+.+++++.++++++++.+++.
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~- 308 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIV- 308 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999999999999999999999999998764 689999999999987665544433322
Q ss_pred HHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCce
Q 002208 264 IVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 343 (953)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m 343 (953)
++.+...+.++...+..++++++++|||+||++++++++.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|
T Consensus 309 ~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 309 WVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp HHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 22222345678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeehhccCCChHHHHHHHHHhccCcCC--ChHHHHHHHhcCC---hhhhhcCcceEEeecCCCCCceEEEEEEcC
Q 002208 344 SVDKNLIEVFAKGVEKDHVMLLAARASRTENQ--DAIDAAIVGMLAD---PKEARAGIREVHFFPFNPVDKRTALTYIDS 418 (953)
Q Consensus 344 ~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~--~~~~~ai~~~~~~---~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~ 418 (953)
+|.++.. ..++++++++..++.|+...+. ||+|.|++.++.. .......++.++++||+|.+|+|+++++.+
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9988653 2355666777766666554444 9999999986531 122345688999999999999999998877
Q ss_pred CCcEEEEEeCcHHHHHHHhhc----cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCC
Q 002208 419 DGHWHRASKGAPEQILALCNA----KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPR 494 (953)
Q Consensus 419 ~g~~~~~~KGa~e~il~~~~~----~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR 494 (953)
+|+.+.++||||+.|+++|+. +++.++.+.+.+++++++|+|++++|++. .|++|+|+|+++++||||
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 888889999999999999975 34556778889999999999999999984 157899999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC--ccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--ASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
||++++|++|+++||+|+|+||||+.||.+||+++||..+.+.. ..+.|. ..++++++.+.+++.++|||++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 99999999999999999999999999999999999997543211 223333 3567788888889999999999999
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 652 (953)
|.++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||++||+|+++++|++|+.++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 002208 653 AVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFF 732 (953)
Q Consensus 653 ~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~~ 732 (953)
.++.|+.....+.....+++++++|.+++|+++++|++++++++|+.+++++|++|+.++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999976444444344567779999999999999998899999999888888888888777777888999998887766
Q ss_pred HHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhhccc
Q 002208 733 WAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYANWG 812 (953)
Q Consensus 733 ~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 812 (953)
++.+..+ ...+ ...+..+.+|++|+++++++.+++|++|+.+++|...+++++++++++.+++.++++++ +
T Consensus 775 ~~~~~~~---~~~~---~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 845 (920)
T 1mhs_A 775 TTMYAQG---ENGG---IVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIW---G 845 (920)
T ss_dssp HHHTTTT---TTCC---SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HHHHHhc---cccc---ccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHh---h
Confidence 6543210 0011 01122357899999999999999999999888776677888888888888777666443 3
Q ss_pred ccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchhHHHhhhccccccccccCChhhHHHHHHHhhhhhc
Q 002208 813 FARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLH 887 (953)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (953)
++...+++|.+|+.+|+++++++++.|+.|++.++. ..|+++.+++.++..++++. -+.+.++.++..
T Consensus 846 ~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~---~~fd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 913 (920)
T 1mhs_A 846 WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS---VGFDNLMHGKSPKGNQKQRS----LEDFVVSLQRVS 913 (920)
T ss_dssp STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC---CTTHHHHHHHSTTTHHHHHH----HHHHHHHHGGGH
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHhccCcccccccccc----chHHHHHHHHHH
Confidence 566789999999999999999999999999886664 37888888766544444322 222455555544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-125 Score=1199.56 Aligned_cols=840 Identities=22% Similarity=0.360 Sum_probs=685.9
Q ss_pred chhhhccc-ccccccCCHHHHHHHcCCCC-CCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 002208 7 SLEEIKNE-TVDLERIPIEEVFEQLKCTR-EGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVM 83 (953)
Q Consensus 7 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail 83 (953)
++++.++| .++||.++.+|+++.|+++. +|||++||++|+++||+|++++++ .+.|++|++||++|+++++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~ 120 (1034)
T 3ixz_A 41 KLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAI 120 (1034)
T ss_pred hHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHH
Confidence 56777777 57999999999999999994 799999999999999999998765 5789999999999999999999999
Q ss_pred HHHHhc---CC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcE
Q 002208 84 AIALAN---GE---GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDI 157 (953)
Q Consensus 84 ~~~l~~---~~---~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDi 157 (953)
+++... .. .....|.++++|++++++|++++++||+|+++++++|+++.+++++|+|||++++|++++||||||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDi 200 (1034)
T 3ixz_A 121 CLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDL 200 (1034)
T ss_pred HHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcE
Confidence 887531 11 112357788889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC----------CcccccceeeeceEEEEEEEecchhHHHHH
Q 002208 158 ISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKA 227 (953)
Q Consensus 158 V~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g----------~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki 227 (953)
|.|++||+|||||+|++|+++.||||+|||||.||.|.++ |++|+||.|.+|++.++|++||.+|++||+
T Consensus 201 V~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI 280 (1034)
T 3ixz_A 201 VEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280 (1034)
T ss_pred EEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHH
Confidence 9999999999999999998899999999999999999875 568999999999999999999999999999
Q ss_pred HHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 002208 228 AHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (953)
Q Consensus 228 ~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~ 306 (953)
++++... .+++|+|+.+++++.++..+++++.++. ++.+...+.+|.+++..++++++++|||+||++++++++.+++
T Consensus 281 ~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~ 359 (1034)
T 3ixz_A 281 ASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATF-FIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359 (1034)
T ss_pred HHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHH
Confidence 9999876 5789999999999887654443322222 2233345678889999999999999999999999999999999
Q ss_pred HHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccC-----------C--C---hHHHHHHHHHhc
Q 002208 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKG-----------V--E---KDHVMLLAARAS 370 (953)
Q Consensus 307 ~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~-----------~--~---~~~~l~~a~~~~ 370 (953)
+|+++|++||+++++|+||++++||||||||||+|+|+|.++++...... . . ...++..++.|+
T Consensus 360 rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~ 439 (1034)
T 3ixz_A 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN 439 (1034)
T ss_pred HHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999998765311000 0 0 113445555553
Q ss_pred cC---------------cCCChHHHHHHHhcC----ChhhhhcCcceEEeecCCCCCceEEEEEEcC---CCcEEEEEeC
Q 002208 371 RT---------------ENQDAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKRTALTYIDS---DGHWHRASKG 428 (953)
Q Consensus 371 ~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KG 428 (953)
.. ..+||.|.|++.++. +....+..++.++.+||+|++|+|++++... +|++++++||
T Consensus 440 ~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KG 519 (1034)
T 3ixz_A 440 RAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519 (1034)
T ss_pred cceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeC
Confidence 21 124789999987653 3444567889999999999999998887643 3678999999
Q ss_pred cHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-----------CCCCCCcEEEEEe
Q 002208 429 APEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-----------ESPGGPWQFVGLL 487 (953)
Q Consensus 429 a~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~llG~i 487 (953)
|||.|+++|+. +++.++.+++.+++++.+|+|||++|++.+++.+. +..|++|+|+|++
T Consensus 520 Ape~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv 599 (1034)
T 3ixz_A 520 APERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLV 599 (1034)
T ss_pred ChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEE
Confidence 99999999973 34567788999999999999999999998865421 2357899999999
Q ss_pred ecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------CccccCcc
Q 002208 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SASLLGQD 545 (953)
Q Consensus 488 ~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~~~~ 545 (953)
+++||||++++++|++|+++||+|+|+|||++.||.++|+++|+..+... ...+.|.+
T Consensus 600 ~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 679 (1034)
T 3ixz_A 600 SMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQ 679 (1034)
T ss_pred eccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHh
Confidence 99999999999999999999999999999999999999999999643210 01222222
Q ss_pred cccccCchhHHHHHHhcC--cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCE
Q 002208 546 KDASIAALPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDI 622 (953)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDi 622 (953)
. ..++++++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+||+||||| +|+|+||++||+
T Consensus 680 l-~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 680 L-KDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred h-hhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 2 2455666777776654 99999999999999999999999999999999999999999999999 999999999999
Q ss_pred eecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHhhhhc-hhccccCCCC
Q 002208 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVK 700 (953)
Q Consensus 623 vl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~ 700 (953)
|+.++++++|+.++++||++|+||++++.|.+++|+..++.++++. +..++|++|+|++|+|+++|++ ++++++|+++
T Consensus 759 Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~ 838 (1034)
T 3ixz_A 759 ILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAE 838 (1034)
T ss_pred EeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999998777666554 4467899999999999999986 6999999987
Q ss_pred CC---CCCCcc-----chHHHHHH-HHHHHHHHHHHHHHHHHHHHh-hccCCC-ccCcc---------ccCC--------
Q 002208 701 PS---PLPDSW-----KLKEIFAT-GVVLGGYLALMTVIFFWAMHE-TDFFPD-KFGVR---------AIRD-------- 752 (953)
Q Consensus 701 ~~---~~p~~~-----~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~-~~~~~~-~~g~~---------~~~~-------- 752 (953)
+. ++|++. ..++++.. .+..|+++++.+++.|++.+. .++.+. .++.. ...+
T Consensus 839 ~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1034)
T 3ixz_A 839 SDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTF 918 (1034)
T ss_pred hhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccch
Confidence 64 223222 22344444 345588998888877665442 222111 01110 0000
Q ss_pred -----CHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchHh
Q 002208 753 -----SEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE---RPGLLLVTAFVIAQLVATLIAVYAN--WGFARIKGVGWG 822 (953)
Q Consensus 753 -----~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 822 (953)
.....+|++|.++++++.++.|++|+++.+.++ ..|+++++++++.+++..++ .|.+ -.++++.+++|.
T Consensus 919 ~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~ 997 (1034)
T 3ixz_A 919 GQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFL-CYCPGMPNIFNFMPIRFQ 997 (1034)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHH-HHhhhHHHHhcCCCCCHH
Confidence 012367999999999999999999997754332 23557777777666655444 4443 234567888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002208 823 WAGVIWLYSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~K~~~r~~~ 849 (953)
+|+++++++++++++.|+.|++.|++.
T Consensus 998 ~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 998 WWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999988764
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-125 Score=1198.31 Aligned_cols=838 Identities=23% Similarity=0.374 Sum_probs=685.5
Q ss_pred hhhhccc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHH
Q 002208 8 LEEIKNE-TVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEK-KESKILKFLGFMWNPLSWVMEAAAVMA 84 (953)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~il~~~ail~ 84 (953)
+++++++ .++||.++.+++++.|+++ .+|||++|+++|+++||+|+++++ +.+.|+.|++||++|++++|+++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3445444 4799999999999999998 689999999999999999999987 478899999999999999999999999
Q ss_pred HHHhc-----CC-CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEE
Q 002208 85 IALAN-----GE-GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDII 158 (953)
Q Consensus 85 ~~l~~-----~~-~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV 158 (953)
++++. +. ....+|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|++++|||||||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 87631 11 1123577888899999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCC----------cccccceeeeceEEEEEEEecchhHHHHHH
Q 002208 159 SIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (953)
Q Consensus 159 ~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~----------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~ 228 (953)
.|++||+|||||+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|.+.++|++||.+|.+||++
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999977999999999999999999886 599999999999999999999999999999
Q ss_pred Hhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 002208 229 HLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (953)
Q Consensus 229 ~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~ 307 (953)
+++..+ .+++|+|+.+++++.++..++++..++.+++. .+.+.+|..++.+++++++++|||+||++++++++.++.+
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 999876 57899999999998876554443333322222 2345678888999999999999999999999999999999
Q ss_pred HhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh--hc-cC-----------CCh--HHHHHHHHHhcc
Q 002208 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV--FA-KG-----------VEK--DHVMLLAARASR 371 (953)
Q Consensus 308 l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~--~~-~~-----------~~~--~~~l~~a~~~~~ 371 (953)
|+++|++||+++++|+||++|+||||||||||+|+|+|.++.... +. .+ .++ +.++..++.|+.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999876421 10 00 011 245556666542
Q ss_pred C---------------cCCChHHHHHHHhcC----ChhhhhcCcceEEeecCCCCCceEEEEEEcC---CCcEEEEEeCc
Q 002208 372 T---------------ENQDAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKRTALTYIDS---DGHWHRASKGA 429 (953)
Q Consensus 372 ~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa 429 (953)
. ..+||+|.|++.++. +....+..++.++.+||+|.+|||+++++.. +|+++.++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 1 124889999988763 3334456789999999999999999999864 57889999999
Q ss_pred HHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-----------CCCCCCcEEEEEee
Q 002208 430 PEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-----------ESPGGPWQFVGLLP 488 (953)
Q Consensus 430 ~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~llG~i~ 488 (953)
||.|+++|+. +++.++.+.+.+++|+++|+|||++|++++++.++ +..|.+++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999964 34556788899999999999999999998865321 23478999999999
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------CccccCccc
Q 002208 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SASLLGQDK 546 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~~~~~ 546 (953)
++|||||+++++|++|+++||+|+|+|||++.||.++|++|||..+... ..++.|.+.
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743111 012222222
Q ss_pred ccccCchhHHHHHHhcC--cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEe
Q 002208 547 DASIAALPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIV 623 (953)
Q Consensus 547 ~~~~~~~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDiv 623 (953)
..+.++++++++.+.+ +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||+|
T Consensus 676 -~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 676 -KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp -TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred -hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 2345667788887775 99999999999999999999999999999999999999999999999 7999999999999
Q ss_pred ecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCccHHHHHHHHHhhhhc-hhccccCCCCC
Q 002208 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL-IWKFDFSPFMVLIIAILNDGT-IMTISKDRVKP 701 (953)
Q Consensus 624 l~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~ 701 (953)
+.+++|++|+.++++||++|+|+++++.|.+++|+..++.++++.+ ..+.|++|+|++|+|+++|++ .+++++|++++
T Consensus 755 l~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~ 834 (1028)
T 2zxe_A 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAES 834 (1028)
T ss_dssp ETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSS
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccch
Confidence 9999999999999999999999999999999999987776665544 467899999999999999986 69999998765
Q ss_pred C---CCCCccc-----hHHHHHH-HHHHHHHHHHHHHHHHHHHHhh-ccCCC--------ccC--cccc----CC--C--
Q 002208 702 S---PLPDSWK-----LKEIFAT-GVVLGGYLALMTVIFFWAMHET-DFFPD--------KFG--VRAI----RD--S-- 753 (953)
Q Consensus 702 ~---~~p~~~~-----~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~-~~~~~--------~~g--~~~~----~~--~-- 753 (953)
+ ++|++++ .++.+.. .+..|+++++++|+.|++.+.. ++.+. ++. .... +. +
T Consensus 835 ~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1028)
T 2zxe_A 835 DIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYE 914 (1028)
T ss_dssp CGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHH
T ss_pred hhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchh
Confidence 3 2333322 2344443 4566999999888776654321 21100 000 0000 00 0
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHhhhccCCCCccc--ChhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchHhHH
Q 002208 754 -----EHEMMAALYLQVSIVSQALIFVTRSRSWSYLE--RPGLLLVTAFVIAQLVATLIAVYAN--WGFARIKGVGWGWA 824 (953)
Q Consensus 754 -----~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 824 (953)
..+.+|++|+++++++.+++|++|+++.+++. .+|+++++++++.+++..++ +|.+ ..++++.+++|.+|
T Consensus 915 ~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w 993 (1028)
T 2zxe_A 915 QRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGTDVALRMYPLKPSWW 993 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHSTTHHHHTCCCCCCGGGG
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHH-HHhhhHHhhhcCCCCCHHHH
Confidence 12578999999999999999999998754322 35667777777766665555 4433 23456788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHh
Q 002208 825 GVIWLYSIVFYVPLDVMKFAIRYI 848 (953)
Q Consensus 825 ~~~~~~~~~~~~~~~~~K~~~r~~ 848 (953)
+++++++++.++..++.|++.|++
T Consensus 994 ~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 994 FCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp GTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888889999999999999987765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-122 Score=1167.17 Aligned_cols=831 Identities=26% Similarity=0.353 Sum_probs=668.6
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 002208 17 DLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANGE--- 91 (953)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~--- 91 (953)
+||.++.+|+++.|+++ .+|||++|+++|+++||+|++++++ +++|+.|++||++|++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 68999999999999998 5799999999999999999999865 688999999999999999999999999875321
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCe--EEEEEccCcCCCcEEEEcCCCccccc
Q 002208 92 GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGK--WSEEEAAILVPGDIISIKLGDIIPAD 169 (953)
Q Consensus 92 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~--~~~i~~~~Lv~GDiV~l~~Gd~IPaD 169 (953)
+....|.++++|++++++|++++++||+|+++++++|+++.+++++|+|||+ +++|++++|||||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1234788889999999999999999999999999999999999999999987 69999999999999999999999999
Q ss_pred EEEEe--cCCeEEeecCCCCCCeeEecCCC-------------CcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc
Q 002208 170 ARLLE--GDPLKVDQSALTGESLPVTKNPG-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (953)
Q Consensus 170 ~~ll~--g~~l~Vdes~LTGEs~pv~K~~g-------------~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~ 234 (953)
|+|++ +++|+||||+|||||.||.|.++ |++|+||.|.+|.++++|++||.+|++||++++++.+
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99964 45789999999999999999987 6899999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c----cccchH----HHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 002208 235 -NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYP-I----QHRKYR----DGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304 (953)
Q Consensus 235 -~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~~~~~l~llv~~iP~aLp~~~~i~~~~~ 304 (953)
.+++|+|+.+++++.++..++++.+++.+++.+. . .+.+|. ..+..++++++++|||+||++++++++.+
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 5789999999999987665544433332222221 1 111232 34557788999999999999999999999
Q ss_pred HHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh--------------hccCCCh-----------
Q 002208 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV--------------FAKGVEK----------- 359 (953)
Q Consensus 305 ~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~--------------~~~~~~~----------- 359 (953)
+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.++.... ....+.+
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 999999999999999999999999999999999999999999876421 0000111
Q ss_pred --------HHHHHHHHHhccCc------------CCChHHHHHHHhcCC-----h--h-------------hhhcCcceE
Q 002208 360 --------DHVMLLAARASRTE------------NQDAIDAAIVGMLAD-----P--K-------------EARAGIREV 399 (953)
Q Consensus 360 --------~~~l~~a~~~~~~~------------~~~~~~~ai~~~~~~-----~--~-------------~~~~~~~~l 399 (953)
..+...++.|+... .+||+|.|++.++.+ . . ..+..++++
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 12333344443211 158999998865421 0 0 123468899
Q ss_pred EeecCCCCCceEEEEEEcCCC-----cEEEEEeCcHHHHHHHhhc----------cHHHHHHHHHHHHHH--HHcCCeEE
Q 002208 400 HFFPFNPVDKRTALTYIDSDG-----HWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKY--AERGLRSL 462 (953)
Q Consensus 400 ~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~--a~~GlR~L 462 (953)
+.+||+|++|||+++++.++| +...++|||||.|+++|+. +++.++++.+.+++| +++|+|||
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987666 5789999999999999964 245567788899999 99999999
Q ss_pred EEEEeccCCCC----------CCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 463 AVARQEVPERT----------KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 463 ~vA~~~~~~~~----------~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
++|||+++..+ ++..|++++|+|+++++||||||++++|++|+++||+++|+|||+..||.++|+++||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 99999886432 12347899999999999999999999999999999999999999999999999999997
Q ss_pred CCCC--CCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 533 TNMY--PSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 533 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
.... ....+.|.+. ..++++++.+++.+..+|||++|+||.++|+.+|++|+.|+|+|||+||+||||+||||||||
T Consensus 644 ~~~~~i~~~~~~g~~~-~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 644 GENEEVADRAYTGREF-DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp CTTCCCTTTEEEHHHH-HTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred CCCCcccceEEEchhh-hhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 5321 1234444333 356667788888999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHhhhh
Q 002208 611 DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA-LIWKFDFSPFMVLIIAILNDG 689 (953)
Q Consensus 611 ~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~~~~~~~il~i~l~~~~ 689 (953)
+|+++|+++||+++.+++|.+|+.++++||++|+||++++.|.+++|+..++.++++. +.++.|++|+|++|+|+++|+
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTH
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998776665544 345678999999999999997
Q ss_pred c-hhccccCCCCCC---CCC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcc-----CCC-ccCc-----c
Q 002208 690 T-IMTISKDRVKPS---PLP----DSWKLKEIFATGVVLGGYLALMTVIFFWAMHE--TDF-----FPD-KFGV-----R 748 (953)
Q Consensus 690 ~-~~~l~~d~~~~~---~~p----~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~--~~~-----~~~-~~g~-----~ 748 (953)
+ +++++++++++. .+| ++...+..+...++.|+++++++++.|++.+. .+. ... .++. .
T Consensus 803 ~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (995)
T 3ar4_A 803 LPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHP 882 (995)
T ss_dssp HHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCS
T ss_pred HHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccc
Confidence 6 689999887543 112 22223345555666799998888765443221 000 000 0000 0
Q ss_pred ccC----C--CHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--ccccccc
Q 002208 749 AIR----D--SEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE---RPGLLLVTAFVIAQLVATLIAVYAN--WGFARIK 817 (953)
Q Consensus 749 ~~~----~--~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 817 (953)
.+. . .....+|++|..+++++.++.|++|+.+.+++. .+|+++++++++.+++..++ +|.+ ..++++.
T Consensus 883 ~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~ 961 (995)
T 3ar4_A 883 HFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLK 961 (995)
T ss_dssp CCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTHHHHHTTCC
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHH-HHHHHHHHhhccC
Confidence 000 0 023578999999999999999999987633221 23557777766665554443 4433 2345677
Q ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002208 818 GVGWGWAGVIWLYSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 849 (953)
+++|..|+++++++++++++.++.|++.|+++
T Consensus 962 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 962 ALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 88888888888899999999999999988765
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-85 Score=793.90 Aligned_cols=523 Identities=24% Similarity=0.354 Sum_probs=451.8
Q ss_pred CchhhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEE-CCeEEEEEccCcCCCcEEEEcCCCcccccEEE
Q 002208 95 PDWQDFV-GIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLR-DGKWSEEEAAILVPGDIISIKLGDIIPADARL 172 (953)
Q Consensus 95 ~~~~~~~-~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R-dG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 172 (953)
..|++.+ +|+++++++..++.+.++|+.+++++|+++.+++++++| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 4566655 667888899999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred EecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHH
Q 002208 173 LEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFC 251 (953)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~ 251 (953)
++| .+.||||+|||||.||.|++|+.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+.+++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 999 4689999999999999999999999999999999999999999999999999999876 57899999999999887
Q ss_pred HHHHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEE
Q 002208 252 ICSIAVGMLVEIIVMYPIQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 330 (953)
Q Consensus 252 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i 330 (953)
+..++++.++.+++++.... ..+..++..++++++++|||+|++++|++++.+..+++++|+++|+++++|+||++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 76655544444444443322 23778899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCce
Q 002208 331 CSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKR 410 (953)
Q Consensus 331 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr 410 (953)
|||||||||+|+|+|.++. ..+.++++++.+++..+... +||++.|++.++.+. ++......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s-~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQS-EHPLANAIVHAAKEK-----GLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSS-CCHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcC-CChHHHHHHHHHHhc-----CCCccCcccccccCCc
Confidence 9999999999999999876 24677888888887665544 499999999887532 2223344578888776
Q ss_pred EEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecC
Q 002208 411 TALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLF 490 (953)
Q Consensus 411 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~ 490 (953)
.... ..+|+ .+.+|+++.+.+..... ..+.+..++++++|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 5432 23554 35679999876654322 245566789999999999999864 899999999
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
|++|++++++|++|+++|++++|+|||+..+|..+|+++|+. +++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCH
Confidence 999999999999999999999999999999999999999985 36999999
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i 650 (953)
+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+|+++++||+|+.++++..++.++++||++|+||++++
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hcCCccHHH
Q 002208 651 IYAVSITIRIVFGFMFIALI-WKFDFSPFM 679 (953)
Q Consensus 651 ~~~l~~ni~~~~~~~~~~~~-~~~~~~~~~ 679 (953)
.|++.+|+..+......++. +++.++|+.
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~ 712 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMI 712 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHH
Confidence 99999998655433322211 344567764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-83 Score=774.39 Aligned_cols=526 Identities=25% Similarity=0.364 Sum_probs=441.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC
Q 002208 97 WQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 176 (953)
Q Consensus 97 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~ 176 (953)
|..++++++++++...++.+.++|+++++++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 96 ~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G- 174 (645)
T 3j08_A 96 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG- 174 (645)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC-
Confidence 3445667777778888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHH
Q 002208 177 PLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSI 255 (953)
Q Consensus 177 ~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i 255 (953)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+||+.++++++ .+++++|+.++++..+++..+
T Consensus 175 ~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~v 254 (645)
T 3j08_A 175 ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTV 254 (645)
T ss_dssp CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999887 478999999999998876655
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCC
Q 002208 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (953)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (953)
++..++.++.++...+.++..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++|||||
T Consensus 255 l~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 255 LLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp HHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCc
Confidence 55444433333333345667778889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEE
Q 002208 336 GTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTY 415 (953)
Q Consensus 336 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (953)
||||+|+|+|.++.. .+.++++++.+++.++... +||++.|++.++.+.. ++.....+|++...+....
T Consensus 335 GTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s-~hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~~~- 403 (645)
T 3j08_A 335 GTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRS-EHPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA- 403 (645)
T ss_dssp GTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE-
T ss_pred ccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcC-CChhHHHHHHHHHhcC-----CCcCCccceEEecCCceEE-
Confidence 999999999998764 2467788888887766554 4999999998764221 1111111222211111100
Q ss_pred EcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCC
Q 002208 416 IDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRH 495 (953)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~ 495 (953)
..+.+|+++.+.+... ..++.+.+..++++++|+|+++++++. +++|+++++|++||
T Consensus 404 -------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~~ 460 (645)
T 3j08_A 404 -------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKE 460 (645)
T ss_dssp -------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCTT
T ss_pred -------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCchh
Confidence 2356799887654322 223566777889999999999999854 89999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHH
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYE 575 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~ 575 (953)
+++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||.+
T Consensus 461 ~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~ 510 (645)
T 3j08_A 461 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSE 510 (645)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHHH
Confidence 9999999999999999999999999999999999984 3699999999999
Q ss_pred HHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002208 576 IVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (953)
Q Consensus 576 iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~ 655 (953)
+|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++.++++..++.++++||++|+|+++++.|+++
T Consensus 511 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 589 (645)
T 3j08_A 511 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 589 (645)
T ss_dssp HHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhhcCCccHHHHHHHHHhhh
Q 002208 656 ITIRIVFGFMFI-ALIWKFDFSPFMVLIIAILND 688 (953)
Q Consensus 656 ~ni~~~~~~~~~-~~~~~~~~~~~~il~i~l~~~ 688 (953)
+|+..+...+.. ..++++.++|+.-.+...+.+
T Consensus 590 ~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss 623 (645)
T 3j08_A 590 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSS 623 (645)
T ss_dssp HHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHhHhhhcccccCHHHHHHHHhcch
Confidence 998644332221 112445678765444333333
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-82 Score=780.61 Aligned_cols=526 Identities=25% Similarity=0.364 Sum_probs=442.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC
Q 002208 97 WQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 176 (953)
Q Consensus 97 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~ 176 (953)
|..++++++++++...++.+.++|+++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 174 ~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G- 252 (723)
T 3j09_A 174 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG- 252 (723)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC-
Confidence 3445667777778888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHH
Q 002208 177 PLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSI 255 (953)
Q Consensus 177 ~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i 255 (953)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+||+.++++++ .+++++|+.++++..+++..+
T Consensus 253 ~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~v 332 (723)
T 3j09_A 253 ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTV 332 (723)
T ss_dssp CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999887 478999999999998876655
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCC
Q 002208 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (953)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (953)
+++.++.+++++...+.++..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|+||||||
T Consensus 333 l~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 333 LLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp HHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCC
Confidence 55444433333333345677789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEE
Q 002208 336 GTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTY 415 (953)
Q Consensus 336 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (953)
||||+|+|+|.++.. .+.++++++.+++.++... +||++.|++.++.+.. +......+|++...+....
T Consensus 413 GTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s-~hP~~~Ai~~~a~~~~-----~~~~~~~~~~~~~g~g~~~- 481 (723)
T 3j09_A 413 GTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRS-EHPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA- 481 (723)
T ss_dssp HHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE-
T ss_pred CccccCceEEEEEEe----CCCCHHHHHHHHHHHhccC-CCchhHHHHHHHHhcC-----CCcCCccceEEecCCceEE-
Confidence 999999999998764 2467788888887766554 4999999998764221 1111111222211111100
Q ss_pred EcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCC
Q 002208 416 IDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRH 495 (953)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~ 495 (953)
..+.+|+++.+.+... ..++.+.+..++++++|+|++++|++. +++|+++++|++||
T Consensus 482 -------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~~ 538 (723)
T 3j09_A 482 -------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKE 538 (723)
T ss_dssp -------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSCT
T ss_pred -------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcch
Confidence 2356799887654322 223567778889999999999999854 89999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHH
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYE 575 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~ 575 (953)
+++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||.+
T Consensus 539 ~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~ 588 (723)
T 3j09_A 539 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSE 588 (723)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHH
T ss_pred hHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHHH
Confidence 9999999999999999999999999999999999985 3699999999999
Q ss_pred HHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002208 576 IVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (953)
Q Consensus 576 iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~ 655 (953)
+|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+|+.++++..++.++++||++|+|+++++.|+++
T Consensus 589 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 667 (723)
T 3j09_A 589 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 667 (723)
T ss_dssp HHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhhcCCccHHHHHHHHHhhh
Q 002208 656 ITIRIVFGFMFI-ALIWKFDFSPFMVLIIAILND 688 (953)
Q Consensus 656 ~ni~~~~~~~~~-~~~~~~~~~~~~il~i~l~~~ 688 (953)
+|+..+...+.. ..++++.++|+.-.+...+.+
T Consensus 668 ~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss 701 (723)
T 3j09_A 668 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSS 701 (723)
T ss_dssp HHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHhhhhccccccCHHHHHHHHhccH
Confidence 998644333222 112455678875444433333
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-33 Score=305.97 Aligned_cols=258 Identities=21% Similarity=0.331 Sum_probs=199.8
Q ss_pred HHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHH
Q 002208 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIV 383 (953)
Q Consensus 304 ~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~ 383 (953)
+..+++++|+++|+.+++|.|+++++||||||||||+|++.|.+.. ++++++.+++..... +.||+..|+.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~-s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEAL-SSHPIAKAIV 75 (263)
Confidence 4578999999999999999999999999999999999999997642 345566666554443 4489999888
Q ss_pred HhcCChhhhhcCcceEEeecCCCCCceEE-EEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEE
Q 002208 384 GMLADPKEARAGIREVHFFPFNPVDKRTA-LTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSL 462 (953)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~s-v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L 462 (953)
.++.+.. ++......|.....+.. ..+ ++ ..+..|.++ +|.+ +
T Consensus 76 ~~~~~~g-----~~~~~~~~~~~~~G~g~~~~~---~~--~~~~~G~~~-------------------------~~~~-~ 119 (263)
T 2yj3_A 76 KYAKEQG-----VKILEVKDFKEISGIGVRGKI---SD--KIIEVKKAE-------------------------NNND-I 119 (263)
Confidence 7654211 11000001110000000 000 00 001111111 2434 4
Q ss_pred EEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccc
Q 002208 463 AVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL 542 (953)
Q Consensus 463 ~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~ 542 (953)
.++++. .+.|.+.+.|+++|++.++|+.|++.|+++.|+|||+..++..+++++|+.
T Consensus 120 ~~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------- 176 (263)
T 2yj3_A 120 AVYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ---------- 176 (263)
Confidence 555544 789999999999999999999999999999999999999999999999984
Q ss_pred CcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE
Q 002208 543 GQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI 622 (953)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi 622 (953)
.+|+.+.|++|..+++.++..++.|+|+|||.||++|+++||+||++|++++.+++.||+
T Consensus 177 --------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~ 236 (263)
T 2yj3_A 177 --------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADI 236 (263)
Confidence 247777799999999999999999999999999999999999999999889999999999
Q ss_pred eecCCCchhHHHHHHHhHHHHHHHHHH
Q 002208 623 VLTEPGLSVIISAVLTSRAIFQRMKNY 649 (953)
Q Consensus 623 vl~~~~~~~i~~ai~~gR~~~~~i~~~ 649 (953)
++.++++..++.++..||+++++|+++
T Consensus 237 v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 237 ILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999874
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=261.96 Aligned_cols=279 Identities=29% Similarity=0.425 Sum_probs=209.0
Q ss_pred HHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHH
Q 002208 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIV 383 (953)
Q Consensus 304 ~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~ 383 (953)
|+++++++|+++|+++++|+++++++||||||||||.+.+.+.++.. . .+ +.++++.+++..+.. ..||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~-s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERR-SEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTT-CCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhc-CCCHHHHHHH
Confidence 67899999999999999999999999999999999999999987653 2 24 777888877766544 4599999998
Q ss_pred HhcCChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEE
Q 002208 384 GMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLA 463 (953)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~ 463 (953)
.++....-.....+....++ .+ .+ .. ..+.+|.++.+.+.... .++.+.+..+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 76632110000011111111 00 00 00 12445776654332111 112345566778889999999
Q ss_pred EEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC
Q 002208 464 VARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 543 (953)
Q Consensus 464 vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~ 543 (953)
+++.. .+.|.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+..
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------- 204 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------- 204 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------
Confidence 99865 7999999999999999999999999999999999999999999999999842
Q ss_pred cccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEe
Q 002208 544 QDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623 (953)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDiv 623 (953)
.|..+.|+.|...++.++.. ..|+|+||+.||++|++.|++||+++++.+..+..+|++
T Consensus 205 --------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 205 --------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred --------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 36667799999999999988 899999999999999999999999998777778889999
Q ss_pred ecCCCchhHHHHHHHhHHHHHHHH
Q 002208 624 LTEPGLSVIISAVLTSRAIFQRMK 647 (953)
Q Consensus 624 l~~~~~~~i~~ai~~gR~~~~~i~ 647 (953)
+.++++..+..++..+|+++++|+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 998999999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-28 Score=225.59 Aligned_cols=111 Identities=31% Similarity=0.497 Sum_probs=106.0
Q ss_pred hHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccc
Q 002208 123 NAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFS 202 (953)
Q Consensus 123 ~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~ 202 (953)
+++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.+|+.+|+
T Consensus 1 ~al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~~v~a 79 (113)
T 2hc8_A 1 EAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGDEVFG 79 (113)
T ss_dssp CHHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTCEECT
T ss_pred CHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCCEEEe
Confidence 357788888999999999999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred cceeeeceEEEEEEEecchhHHHHHHHhhhcc
Q 002208 203 GSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (953)
Q Consensus 203 Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~ 234 (953)
||.+.+|.+.++|++||.+|.+|++.++++++
T Consensus 80 Gt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 80 ATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp TCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 99999999999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-27 Score=225.21 Aligned_cols=116 Identities=28% Similarity=0.471 Sum_probs=107.2
Q ss_pred HHHhhhHHHHhhcCCCCeEEEEECCe------EEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCee
Q 002208 118 ENNAGNAAAALMAGLAPKTKLLRDGK------WSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLP 191 (953)
Q Consensus 118 e~~~~~~~~~l~~~~~~~~~V~RdG~------~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~p 191 (953)
++|+.+++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 57889999999999999999999764 789999999999999999999999999999996 48999999999999
Q ss_pred EecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc
Q 002208 192 VTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (953)
Q Consensus 192 v~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~ 234 (953)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+++++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=241.89 Aligned_cols=276 Identities=29% Similarity=0.406 Sum_probs=202.6
Q ss_pred ccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhc
Q 002208 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARA 394 (953)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (953)
+|+++++|.|++++.||||||||||.|+++|.+... +. + +.+.++.+++...... .++...++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s-~~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARS-EHPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccC-CCHHHHHHHHHHHhcCCCCC
Confidence 588999999999999999999999999999988653 22 3 6777777776655443 37787777766532111111
Q ss_pred CcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC
Q 002208 395 GIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK 474 (953)
Q Consensus 395 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~ 474 (953)
....+..++-. .....+ ++. .+..|.++.+........ .....+..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g~----~~~~~~---~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGK----GVEGIV---NGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTT----EEEEEE---TTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCC----EEEEEE---CCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 11222222211 111111 232 334577776655432211 23456778899998888755
Q ss_pred CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchh
Q 002208 475 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALP 554 (953)
Q Consensus 475 ~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~ 554 (953)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+++|+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------- 185 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------- 185 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------------
Confidence 7899999999999999999999999999999999999999999999999842
Q ss_pred HHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHH
Q 002208 555 VEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 555 ~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ 634 (953)
.|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++||+|+++++.++++||+++..+++..+..
T Consensus 186 ---------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 186 ---------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp ---------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred ---------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 477788999999999998876 4699999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHH
Q 002208 635 AVLTSRAIFQRMKNYTIYAVS 655 (953)
Q Consensus 635 ai~~gR~~~~~i~~~i~~~l~ 655 (953)
+++.+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-23 Score=228.43 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=115.3
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHH--HHhcCcEee
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEEL--IEKADGFAG 567 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~vfar 567 (953)
.+++||+++++++.|+++|++|+|+|||...++.++++++|+..... .+...... .++..+... -+..+.+++
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l~--~~~~~~~~~~~~~~i~~~~k 213 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMD--FDENGVLKGFKGELIHVFNK 213 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECEE--ECTTSBEEEECSSCCCTTCH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeEE--EcccceeEeccccccchhhc
Confidence 58999999999999999999999999999999999999999864311 01000000 000000000 012356888
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhh---hCCeeEEec-------CchHHHhhccCEeecCCCchhHHHHHH
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK---KADIGIAVA-------DATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk---~AdVGIamg-------~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|.+|...+..+++.++.|+|+|||+||+||++ +||+||+|| ++++.+++++||||++|++..++.+|.
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 9999999999999999999999999999999955 999999999 789999999999999999999999885
Q ss_pred H
Q 002208 638 T 638 (953)
Q Consensus 638 ~ 638 (953)
+
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-19 Score=177.52 Aligned_cols=139 Identities=21% Similarity=0.377 Sum_probs=117.6
Q ss_pred cCCChHHHHHHHHHhc--cCcCCChHHHHHHHhcCCh--hhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcH
Q 002208 355 KGVEKDHVMLLAARAS--RTENQDAIDAAIVGMLADP--KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAP 430 (953)
Q Consensus 355 ~~~~~~~~l~~a~~~~--~~~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 430 (953)
.|.+.+.++.+|+.++ .....||+|.|++.++... ...+..|+.++++||||.+|||++++++++|+.++++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 4788899999999998 4556799999999887532 22356799999999999999999999887888899999999
Q ss_pred HHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCC---CCCCCCCcEEEEEeecCCCC
Q 002208 431 EQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERT---KESPGGPWQFVGLLPLFDPP 493 (953)
Q Consensus 431 e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~---~~~~e~~l~llG~i~i~D~l 493 (953)
|.|+++|+. +++.++.+.+.+++|+++|+|||++||+.++..+ ....|++|+|+|+++|-|.-
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 999999974 4566788999999999999999999999987543 23469999999999998853
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.37 E-value=3.4e-13 Score=138.00 Aligned_cols=126 Identities=21% Similarity=0.361 Sum_probs=104.5
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~ 579 (953)
+|+.|+++|+++.++||++...+..+++++|+... |..+ .+|.+.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~------------------------------f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHL------------------------------FQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEE------------------------------ECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHH------------------------------hcCc--CChHHHHHH
Confidence 99999999999999999999999999999998521 2222 445555555
Q ss_pred hccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC----chhHHHHHHHhHHHHHHHHHHHH
Q 002208 580 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTI 651 (953)
Q Consensus 580 lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~----~~~i~~ai~~gR~~~~~i~~~i~ 651 (953)
+.++ .+.|+|+||+.||++|++.|++|++++++.+.+++.||+++.+++ +..+.+.+..+|..+++|++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 5443 567999999999999999999999999999999999999998774 66788888899999999999988
Q ss_pred HHHHHH
Q 002208 652 YAVSIT 657 (953)
Q Consensus 652 ~~l~~n 657 (953)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 877665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-12 Score=141.97 Aligned_cols=156 Identities=13% Similarity=0.131 Sum_probs=113.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.|+++|+++.|+||+....+..+.+++|+..-......+.......... ....+++..|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~---------~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVL---------GEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEE---------SCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeec---------ccccChhhhHH
Confidence 789999999999999999999999999999999999999853110000000000000000 00112233455
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~ 651 (953)
...++.+.++-..+.|+|+|||.||++|++.|++|++| ++.+..++.||+++..+++..++.++.......++++.++.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 56666666666667899999999999999999999999 89999999999999999999999999888877788888888
Q ss_pred HHHHHH
Q 002208 652 YAVSIT 657 (953)
Q Consensus 652 ~~l~~n 657 (953)
+.+.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 877665
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.9e-11 Score=120.78 Aligned_cols=131 Identities=21% Similarity=0.231 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHH
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHK 573 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K 573 (953)
.++..++|++|+++|+++.++||++...+..+.+++|+... |... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------------------------------~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------------------------------FLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------------------------------EESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecCC--CCc
Confidence 34567999999999999999999999999999999998531 1111 234
Q ss_pred HHHHHHhcc----cCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHH----HHHHHhHHHHHH
Q 002208 574 YEIVKKLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVII----SAVLTSRAIFQR 645 (953)
Q Consensus 574 ~~iV~~lq~----~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~----~ai~~gR~~~~~ 645 (953)
...++.+.+ ..+.|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++...++ +.+...|..|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 454443332 236799999999999999999999999999999999999999887655555 444556667888
Q ss_pred HHHHHHHHHHH
Q 002208 646 MKNYTIYAVSI 656 (953)
Q Consensus 646 i~~~i~~~l~~ 656 (953)
++..+-|+.+.
T Consensus 165 ~~~~~~~~~~~ 175 (180)
T 1k1e_A 165 FDTAQGFLKSV 175 (180)
T ss_dssp HHCHHHHHHHG
T ss_pred hhhccchhhhh
Confidence 88777776654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=5.3e-11 Score=121.90 Aligned_cols=124 Identities=18% Similarity=0.232 Sum_probs=102.5
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee--cCHHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG--VFPEHKYEIV 577 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~~P~~K~~iV 577 (953)
+|+.|+++|+++.++||+....+..+.+++|+... |.. -.|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~------------------------------~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY------------------------------YKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE------------------------------ECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc------------------------------eeCCCChHHHHHHHH
Confidence 49999999999999999999999999999998531 222 2466666777
Q ss_pred HHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCc----hhHHHHHHHhHHHHHHHHHHHHHH
Q 002208 578 KKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGL----SVIISAVLTSRAIFQRMKNYTIYA 653 (953)
Q Consensus 578 ~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~----~~i~~ai~~gR~~~~~i~~~i~~~ 653 (953)
+.++-....|+|+||+.||++|++.|+++++++++.+.++..||+++.+++- ..+.+.+...|..|+++.++.+|+
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 7777667789999999999999999999999999999999999999998874 445566667777888777766553
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=122.78 Aligned_cols=147 Identities=22% Similarity=0.147 Sum_probs=105.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCc-cc---cCccc-c-cc--------------
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSA-SL---LGQDK-D-AS-------------- 549 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~-~l---~~~~~-~-~~-------------- 549 (953)
.++.+++.++|++|++.|++++++||++...+..+++++|+..... .+. .+ .+... . ..
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~ 100 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 100 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence 4577899999999999999999999999999999999999864211 000 01 11110 0 00
Q ss_pred ---------------------cCchhHHHHHHh--cC-----cEeecCH--HHHHHHHHHhccc----CCEEEEEcCCcc
Q 002208 550 ---------------------IAALPVEELIEK--AD-----GFAGVFP--EHKYEIVKKLQER----KHICGMTGDGVN 595 (953)
Q Consensus 550 ---------------------~~~~~~~~~~~~--~~-----vfar~~P--~~K~~iV~~lq~~----g~~V~~~GDG~N 595 (953)
.+.+.++++.+. .. .+..+.| .+|...++.+.+. ...|+++||+.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n 180 (227)
T 1l6r_A 101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 180 (227)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence 001122222221 11 1223445 5788888777653 346999999999
Q ss_pred CHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 596 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 596 D~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
|.+|++.|++||+|+++.+.+++.||+++.+++-.++..+++
T Consensus 181 D~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 181 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 999999999999999999999999999999888888888875
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=119.92 Aligned_cols=102 Identities=23% Similarity=0.345 Sum_probs=83.0
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHH-
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIV- 577 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV- 577 (953)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...+
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 45999999999999999999999999999999852 12222 2344444
Q ss_pred ---HHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhH
Q 002208 578 ---KKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVI 632 (953)
Q Consensus 578 ---~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i 632 (953)
+.+.-....|+|+||+.||.+|++.|+++++|+++.+.+++.||+|+.+++-.++
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTH
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCH
Confidence 4444345679999999999999999999999999999999999999988765553
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.8e-10 Score=115.37 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=96.4
Q ss_pred cCCeEEEEEEecc-CCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH--HhCCCC
Q 002208 457 RGLRSLAVARQEV-PERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR--RLGMGT 533 (953)
Q Consensus 457 ~GlR~L~vA~~~~-~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~--~lGi~~ 533 (953)
++.+.+++-.... .++. -....+-..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~-~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGH-IYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSC-CBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-
T ss_pred hcCcEEEEeCccceECCc-EEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-
Confidence 4566666654432 1111 111122256777777777 3899999999999999999 67788888 55552
Q ss_pred CCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 534 NMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 534 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
. |.. +++|...++.+.++ ...|+|+||+.||++|++.|+++++|
T Consensus 77 -~-----------------------------~~g--~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~ 124 (168)
T 3ewi_A 77 -T-----------------------------EVS--VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP 124 (168)
T ss_dssp -E-----------------------------ECS--CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC
T ss_pred -E-----------------------------EEC--CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe
Confidence 1 111 23466666655443 45799999999999999999999999
Q ss_pred cCchHHHhhccCEeecCCCchhHH
Q 002208 610 ADATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 610 g~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
+++.+.+++.||+|+.+++-.+.+
T Consensus 125 ~na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 125 ADACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp TTCCHHHHTTCSEECSSCTTTTHH
T ss_pred CChhHHHHHhCCEEeCCCCCccHH
Confidence 999999999999999887666544
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-10 Score=118.95 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=84.0
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~ 579 (953)
+++.|+++|+++.++||++...+..+++++|+.. +|..+ ..|.+.++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 9999999999999999999999999999999852 13322 445666655
Q ss_pred hccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchh
Q 002208 580 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 631 (953)
Q Consensus 580 lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~ 631 (953)
+.++ ...|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 5443 578999999999999999999999999999999999999998875443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.6e-10 Score=113.30 Aligned_cols=104 Identities=26% Similarity=0.364 Sum_probs=86.1
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~ 579 (953)
+++.|+++|+++.++||+....+..+++++|+. . |+.. ..|.+.++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~-----------------------------~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--V-----------------------------LHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--E-----------------------------EESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--e-----------------------------EeCC--CChHHHHHH
Confidence 999999999999999999999999999999984 1 2222 345555554
Q ss_pred hccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 580 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 580 lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+.++ ...|+|+||+.||++|++.|++|++++++.+.+++.||+++.+++..+++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 4433 46799999999999999999999999999999999999999988866666554
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.5e-10 Score=91.01 Aligned_cols=51 Identities=75% Similarity=1.098 Sum_probs=49.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhccccchhhhHhhcCCChhhhhccccC
Q 002208 903 SYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953 (953)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (953)
+|.++++++|++++++|+++|||+||+++|++|+++++|.|++.++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 578899999999999999999999999999999999999999999999997
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=106.59 Aligned_cols=140 Identities=19% Similarity=0.277 Sum_probs=96.5
Q ss_pred CCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCCh-hhhhcCcc--eEEeecCCCCCce
Q 002208 334 KTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADP-KEARAGIR--EVHFFPFNPVDKR 410 (953)
Q Consensus 334 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~l~~~pF~s~~kr 410 (953)
..||+|-|...+.+... ..+.++++++.+|+.++..+ +||++.|++.++... ........ ..++.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~S-eHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLAD-ETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSC-CSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcC-CCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998753 34788999999998887554 499999999877532 11011110 2346799998886
Q ss_pred EEEEEEcCCCcEEEEEeCcHHHHHHHhhcc-HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeec
Q 002208 411 TALTYIDSDGHWHRASKGAPEQILALCNAK-EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPL 489 (953)
Q Consensus 411 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i 489 (953)
..+.+ +| ..+.+|+++.|.+++... .+.+..+.+.+++++++|.++++||... +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 56 467899998877766431 1223357778889999999999999754 89999999
Q ss_pred CCCCCC
Q 002208 490 FDPPRH 495 (953)
Q Consensus 490 ~D~lR~ 495 (953)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999997
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-09 Score=108.10 Aligned_cols=102 Identities=28% Similarity=0.314 Sum_probs=83.3
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC--HHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF--PEHKYEIV 577 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~--P~~K~~iV 577 (953)
+++.|++.|+++.++||++...+..+.+++|+... |.... |+--..+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~kpk~~~~~~~~ 88 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGVVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------ecccCChHHHHHHHH
Confidence 89999999999999999999999999999998531 11112 23333444
Q ss_pred HHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchh
Q 002208 578 KKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 631 (953)
Q Consensus 578 ~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~ 631 (953)
+.+.-..+.|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++..+
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 444444567999999999999999999999999999999999999999988554
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.1e-10 Score=127.83 Aligned_cols=165 Identities=13% Similarity=0.122 Sum_probs=109.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCccc--------------ccccC---chh
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDK--------------DASIA---ALP 554 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~--------------~~~~~---~~~ 554 (953)
++++++.+.++.|++ |+.+.++||+....+..+.+.+|+...... ..+..... +..+. .++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHG-TEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEE-EBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcc-cccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 999999999997777777888877321100 00000000 00000 011
Q ss_pred HHHHHHhc------CcEe----ecCHHHHHHHHHHhcccC--CEEEEEcCCccCHHhhhhC----CeeEEecCchHHHhh
Q 002208 555 VEELIEKA------DGFA----GVFPEHKYEIVKKLQERK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARG 618 (953)
Q Consensus 555 ~~~~~~~~------~vfa----r~~P~~K~~iV~~lq~~g--~~V~~~GDG~ND~paLk~A----dVGIamg~~t~~a~~ 618 (953)
+ +.+.+. ..+. -..+.+|...++.++... +.|+++|||.||++|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 111100 0111 112567988888776543 5699999999999999999 999999 99999999
Q ss_pred ccCEeecCCCchhHHHHH----HHhHHHHHHHHH-------HHHHHHHHHHHHH
Q 002208 619 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN-------YTIYAVSITIRIV 661 (953)
Q Consensus 619 aaDivl~~~~~~~i~~ai----~~gR~~~~~i~~-------~i~~~l~~ni~~~ 661 (953)
+||+|+.+++...+..++ ..||..+ ++-+ |+.+..+.|+..+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 311 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEV 311 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHH
Confidence 999999998887776654 5677777 5555 4444445555443
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.9e-10 Score=76.32 Aligned_cols=30 Identities=83% Similarity=1.226 Sum_probs=29.3
Q ss_pred hhhhccccchhhhHhhcCCChhhhhccccC
Q 002208 924 RELHTLKGHVESVVKLKGLDIDTIQQHYTV 953 (953)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (953)
||+||++||+||++|+||+|+|+|||||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 799999999999999999999999999997
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.85 E-value=5.3e-09 Score=120.17 Aligned_cols=137 Identities=20% Similarity=0.227 Sum_probs=106.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee----
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG---- 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar---- 567 (953)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.........+.+. .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg------------------~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG------------------TLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT------------------EEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC------------------EEEeeEccC
Confidence 78999999999999999999999999999999999999995311000000000 00111
Q ss_pred -cCHHHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHH
Q 002208 568 -VFPEHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAI 642 (953)
Q Consensus 568 -~~P~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~ 642 (953)
..++.|.++++.+.++ .+.|.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..++.++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1256676666655443 35699999999999999999999999 77888999999999999999999999888887
Q ss_pred HHHHH
Q 002208 643 FQRMK 647 (953)
Q Consensus 643 ~~~i~ 647 (953)
+++.-
T Consensus 397 ~~~~~ 401 (415)
T 3p96_A 397 IEAAD 401 (415)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.1e-08 Score=110.47 Aligned_cols=67 Identities=24% Similarity=0.297 Sum_probs=56.8
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
.|...++.+.++ ...|+++||+.||.+|++.|++|||||++.+.+|++||+|+.+++-.++..+|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 566666555433 3469999999999999999999999999999999999999998888899888753
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=7.2e-09 Score=106.79 Aligned_cols=132 Identities=22% Similarity=0.275 Sum_probs=95.0
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee--c
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG--V 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~ 568 (953)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+...+ . .... .++. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~~~~~~~-~-~~~~-----------~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF--SNTLIVEN-D-ALNG-----------LVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE--EEEEEEET-T-EEEE-----------EEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc--cceeEEeC-C-EEEe-----------eeccCCC
Confidence 468899999999999999999999999999999999999985321 00100000 0 0000 0000 1
Q ss_pred CHHHHHHHHHHh----cccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 569 FPEHKYEIVKKL----QERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 569 ~P~~K~~iV~~l----q~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
.+..|.+.++.+ .-....|.|+||+.||.+|++.|+++++| ++.+..++.||+++.++++..+..++++
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 234455555444 33345699999999999999999999999 8888899999999999999998887744
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=5.4e-08 Score=105.57 Aligned_cols=67 Identities=15% Similarity=0.150 Sum_probs=57.1
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
.|..-++.+.+. ...|+++||+.||.+|++.|++|+||+++.+.+|+.||+|+.+++-.++..++++
T Consensus 202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 466666655443 3469999999999999999999999999999999999999988888889888854
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.5e-08 Score=112.03 Aligned_cols=132 Identities=16% Similarity=0.168 Sum_probs=94.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+...........++....... ..-..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~-------------~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT-------------LPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEEC-------------SSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEe-------------cccCCCC
Confidence 488999999999999999999999999999999999999853211000000000000000 0001234
Q ss_pred HHHHHHHHh----cccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKL----QERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~l----q~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|.++++.+ .-....|.|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..++.+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 555555443 33345799999999999999999999999 577888889999999999998887663
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=2.1e-08 Score=108.26 Aligned_cols=65 Identities=23% Similarity=0.266 Sum_probs=45.5
Q ss_pred HHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 573 KYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 573 K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
|..-++.+.+. ...|+++||+.||.+|++.|++||||++|.+..|++||+|..+++-.++..+|+
T Consensus 198 K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 198 KGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 66666655443 345999999999999999999999999999999999999998888888888773
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.8e-08 Score=100.18 Aligned_cols=107 Identities=24% Similarity=0.303 Sum_probs=82.5
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC--HHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF--PEHKYEIV 577 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~--P~~K~~iV 577 (953)
+|+.|+++|+++.++||++...+..+.+++|+... |.... |+--.++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~~kpk~~~~~~~~ 110 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQGQSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECSCSCSHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecCCCCCHHHHHHHH
Confidence 89999999999999999999999999999998521 11111 22222233
Q ss_pred HHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHH-HHH
Q 002208 578 KKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVII-SAV 636 (953)
Q Consensus 578 ~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~-~ai 636 (953)
+.+.-..+.|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++-.+++ +++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 33332235799999999999999999999999988888888999999888666665 444
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.66 E-value=6.2e-08 Score=103.35 Aligned_cols=55 Identities=24% Similarity=0.274 Sum_probs=50.3
Q ss_pred CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 584 KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 584 g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
...|+++||+.||.+|++.|++||||+++.+.+|+.||+|..+++-.++..++++
T Consensus 199 ~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 199 KKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp GGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred HHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 3469999999999999999999999999999999999999988888899888853
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.4e-08 Score=100.84 Aligned_cols=128 Identities=23% Similarity=0.337 Sum_probs=88.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee-cCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG-VFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~~P 570 (953)
++.|++.++++.|++.|+++.++||+....+..+.+.+|+... .......... .... .+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~----------~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDG---KLTG----------DVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETT---EEEE----------EEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECC---EEcC----------CcccCccCC
Confidence 4668999999999999999999999998888888889987421 1000000000 0000 00000 123
Q ss_pred HHHHHHHHHhcc-c---CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHH
Q 002208 571 EHKYEIVKKLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 571 ~~K~~iV~~lq~-~---g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ 634 (953)
..|.+.++.+.+ . .+.|+++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 466555554433 2 345999999999999999999999998 56777889999998777776653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.64 E-value=8.1e-08 Score=94.82 Aligned_cols=113 Identities=20% Similarity=0.205 Sum_probs=89.4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+.+++.++++.|++.|+++.++||.....+..+.+++|+... ..+ ..-.|+-
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------~~~----------------------~kp~~~~ 88 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------YTG----------------------SYKKLEI 88 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------EEC----------------------C--CHHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------ccC----------------------CCCCHHH
Confidence 346788999999999999999999999999999999998521 000 1122333
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
-..+++.++-..+.++|+||+.||.+|.+.|++++++.++.+..++.||+++.+.+-.+++
T Consensus 89 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 89 YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 3445555555556799999999999999999999999888888888999999888777766
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=103.33 Aligned_cols=66 Identities=21% Similarity=0.213 Sum_probs=55.1
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE--eecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI--VLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi--vl~~~~~~~i~~ai~ 637 (953)
.|..-++.+.+. ...|+++||+.||.+|++.|++||||++|.+.+|++||+ +..+++-.++..+|+
T Consensus 209 ~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 209 SKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 477777666543 246999999999999999999999999999999999984 667777888888774
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-08 Score=103.52 Aligned_cols=118 Identities=20% Similarity=0.304 Sum_probs=88.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... . ........ .. . -....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~-~~~~~~~~---~~------------~-~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A-NRAIFEDG---KF------------Q-GIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E-EEEEEETT---EE------------E-EEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e-eeEEeeCC---ce------------E-CCcCCcc
Confidence 7899999999999999999999999998888887 87876421 0 00000000 00 0 0345567
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
.|...++.+ ....|.|+||+.||.+|++.|++||+|+++.+ .||+++. ++..+...+
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l 196 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFI 196 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHH
Confidence 899999988 55678999999999999999999999997766 8899984 466666555
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.60 E-value=4.1e-08 Score=105.33 Aligned_cols=67 Identities=22% Similarity=0.264 Sum_probs=56.8
Q ss_pred HHHHHHHHhcc----cCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~----~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
.|..-++.+.+ ....|+++||+.||.+|++.|++|||||++.+.+|++||+|..+++-.++..++++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 46655555433 34569999999999999999999999999999999999999999888899888854
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.60 E-value=8e-08 Score=104.22 Aligned_cols=66 Identities=23% Similarity=0.236 Sum_probs=57.3
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|..-++.+.+. ...|+++||+.||.+|++.|++||||++|.+.+|++||+|..+++-.++..+++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 477777666543 245999999999999999999999999999999999999999988889988875
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.58 E-value=1e-07 Score=100.12 Aligned_cols=146 Identities=23% Similarity=0.238 Sum_probs=99.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC-Cc--ccc-Ccc-------------------c-c
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP-SA--SLL-GQD-------------------K-D 547 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~-~~--~l~-~~~-------------------~-~ 547 (953)
.+.+.+.+++++++++|+++.++||.....+..+.+.+|+...... .. ... +.. . .
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 4667899999999999999999999999999999999998532110 00 000 000 0 0
Q ss_pred c------------------ccCchhHHHHHHhc----CcE-----eecCH--HHHHHHHHHhccc----CCEEEEEcCCc
Q 002208 548 A------------------SIAALPVEELIEKA----DGF-----AGVFP--EHKYEIVKKLQER----KHICGMTGDGV 594 (953)
Q Consensus 548 ~------------------~~~~~~~~~~~~~~----~vf-----ar~~P--~~K~~iV~~lq~~----g~~V~~~GDG~ 594 (953)
. ..+.+.++++++.. ++. ..+.| ..|...++.+.++ ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0 00112233333321 111 22333 3576666665442 34689999999
Q ss_pred cCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 595 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 595 ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
||.+|++.|++|++|+++.+..++.||+++.+++-.++..+++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999998888999999998777777777774
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.58 E-value=7.3e-08 Score=103.30 Aligned_cols=67 Identities=27% Similarity=0.312 Sum_probs=57.0
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
.|..-++.+.++ ...|+++||+.||.+|++.|++||||++|.+.+|++||+|..+++-.++..++++
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 465555555433 3459999999999999999999999999999999999999999999999988854
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.7e-07 Score=102.73 Aligned_cols=67 Identities=25% Similarity=0.236 Sum_probs=57.4
Q ss_pred HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 571 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 571 ~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|..-++.+.++ ...|+++||+.||.+|++.|++||||++|.+.+|++||+|+.+++-.++..+|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 3577666666443 245999999999999999999999999999999999999999888888988885
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-07 Score=95.95 Aligned_cols=128 Identities=15% Similarity=0.139 Sum_probs=95.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.........+ +.+. ....-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~-~~~~-----------------~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL-GRDE-----------------APPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-CTTT-----------------SCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-eCCC-----------------CCCCCCHH
Confidence 45689999999999999999999999999999999999985321001111 1110 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCchHHHhhccCEeecCCCchhHHHHHHHh
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~g 639 (953)
--..+.+.+.-....|.|+||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..++..+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 4445666665555679999999999999999999 9999988777788899998 5677888777543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=2e-07 Score=95.32 Aligned_cols=129 Identities=15% Similarity=0.092 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCC-CCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN-MYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ..........+.. .. ........|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--FK----------ELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--EE----------EEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--ee----------ccCCCCCCcc
Confidence 789999999999999999999999999999999999998531 1111111000000 00 0001233456
Q ss_pred HHHHHHHHh-cccCCEEEEEcCCccCHHhhhh--CCeeEE--ecCchHHHhhccCEeecCCCchhHHHH
Q 002208 572 HKYEIVKKL-QERKHICGMTGDGVNDAPALKK--ADIGIA--VADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 572 ~K~~iV~~l-q~~g~~V~~~GDG~ND~paLk~--AdVGIa--mg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
.|.+.+..+ .-....+.|+||+.||.+|++. +.+|++ ++++.+..+..||+++ +++..+...
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~ 217 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASL 217 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHh
Confidence 677766554 5567889999999999999975 224444 4567788888999998 446555544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.45 E-value=3.3e-07 Score=95.54 Aligned_cols=129 Identities=19% Similarity=0.248 Sum_probs=94.3
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 163 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHP 163 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSS
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCH
Confidence 357799999999999999999999999999999999999975321 111111100 0112234
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe---eEEecCc-hHHHhh-ccCEeecCCCchhHHHHHHHhH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI---GIAVADA-TDAARG-ASDIVLTEPGLSVIISAVLTSR 640 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV---GIamg~~-t~~a~~-aaDivl~~~~~~~i~~ai~~gR 640 (953)
+--..+.+.+.-....|+|+||+.||+.|++.|++ +|++|++ .+..+. .||+++ +++..+...++.++
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 44456666666666779999999999999999999 9998844 344554 799998 56888888886653
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.42 E-value=6.5e-07 Score=91.52 Aligned_cols=128 Identities=15% Similarity=0.129 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ......+.+.. ....-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~~--------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSDR--------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTSC--------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCce--------------EEeeecCCCc
Confidence 5789999999999999 999999999999999999999986321 01111111000 0000124688
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
.|...++.+......|+|+||+.||++|.+.|++++++....+....+.+++. -+++..+...+
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l 196 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHH
Confidence 99999999988888999999999999999999999998544444333445542 35677777655
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.40 E-value=6e-07 Score=97.27 Aligned_cols=66 Identities=23% Similarity=0.209 Sum_probs=56.3
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|...++.+.+. ...|+++||+.||.+|++.|++||+|+++.+..++.||+++.+++-.++..+++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 677777666543 346899999999999999999999999999999999999998888888888774
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.1e-06 Score=90.66 Aligned_cols=127 Identities=9% Similarity=0.087 Sum_probs=91.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... ...-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDG-----------------KLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------SSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCC-----------------CCCCCH
Confidence 467899999999999999999999999999999999999985321 1111110000 011123
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe---eEEecCchHH--HhhccCEeecCCCchhHHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV---GIamg~~t~~--a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
+--..+.+.++-....|+++||+.||..|.+.|++ +|++|++... .+..||+++ +++..+...+..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 33445566666555679999999999999999999 8888854433 357899998 457777777644
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.25 E-value=7.7e-07 Score=92.34 Aligned_cols=126 Identities=20% Similarity=0.248 Sum_probs=85.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCCcc-------ccCcccccccCchhHHHHHHhc
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSAS-------LLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+.. +...... +.+.+.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~---------------- 148 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE---------------- 148 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT----------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC----------------
Confidence 3688999999999999999999999999999999999999863 1111000 000000
Q ss_pred CcEeecCHHHHHHHHHHhccc-C-CEEEEEcCCccCHHhhhhCCeeEEecCc--hHHHhhccCEeecCCCchhHHHH
Q 002208 563 DGFAGVFPEHKYEIVKKLQER-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq~~-g-~~V~~~GDG~ND~paLk~AdVGIamg~~--t~~a~~aaDivl~~~~~~~i~~a 635 (953)
....+.+..|-++++.+.++ | ..+.|+||+.||.+|.++|+++|+++.+ .+.....+|+++. ++..+...
T Consensus 149 -~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 222 (225)
T 1nnl_A 149 -TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGE 222 (225)
T ss_dssp -TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC-
T ss_pred -CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHH
Confidence 00011123555555544332 3 5699999999999999999999888732 2344556899884 45555443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.24 E-value=2e-06 Score=88.25 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+.++.+++.|+++.++|+........+.+.+|+.... ...+.+... ....-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-----------------~~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEecccc-----------------CCCCCChH
Confidence 45789999999999999999999999988888888888875321 111111100 01111244
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe----cCchHHHhhccCEeecCCCchhHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam----g~~t~~a~~aaDivl~~~~~~~i~~ 634 (953)
--..+.+.++-....|+++||+.||.+|++.|++++++ +++.+..+..||+++.+ +..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC--HHHHhH
Confidence 44556666665566799999999999999999999999 45555567889999843 444443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-06 Score=89.26 Aligned_cols=120 Identities=5% Similarity=-0.055 Sum_probs=83.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.+++.|+++.++|++ ..+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC-----------------CCCCChH
Confidence 46799999999999999999999998 3456677778874311 1111111000 1111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
--..+.+.+.-....|.++||+.||.+|++.|+++++|.++.+..+ .||+++.+.+-..+.
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~ 210 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLE 210 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHH
Confidence 3445566665555679999999999999999999999998887777 899998655433333
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-06 Score=91.05 Aligned_cols=64 Identities=22% Similarity=0.280 Sum_probs=52.2
Q ss_pred HHHHHHHHHhccc-C-----CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 571 EHKYEIVKKLQER-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 571 ~~K~~iV~~lq~~-g-----~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|..-++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 4677777666543 3 679999999999999999999999999888 4 7889988877777777664
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.20 E-value=4.7e-06 Score=89.95 Aligned_cols=51 Identities=22% Similarity=0.150 Sum_probs=26.2
Q ss_pred EEEEcCCccCHHhhhhCCeeEEecCch---HHHhhc--cC-EeecCCCchhHHHHHH
Q 002208 587 CGMTGDGVNDAPALKKADIGIAVADAT---DAARGA--SD-IVLTEPGLSVIISAVL 637 (953)
Q Consensus 587 V~~~GDG~ND~paLk~AdVGIamg~~t---~~a~~a--aD-ivl~~~~~~~i~~ai~ 637 (953)
|+++||+.||.+|++.|++||+|+++. +..++. || ++..+++-.++..+++
T Consensus 211 ~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 211 TLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp EEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred EEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 999999999999999999999999887 556543 78 8888888778887774
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.2e-06 Score=87.01 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcE-eecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGF-AGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf-ar~~P 570 (953)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- .......... ...+ ... ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~---~~~g----------~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYRDG---RYTG----------RIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEETT---EEEE----------EEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEECC---EEee----------eecCCCCcc
Confidence 4789999999999999999999999999999999999998521 1100000000 0000 000 11224
Q ss_pred HHHHHHHHHhcc-cC------CEEEEEcCCccCHHhhhhCCeeEEecCchH
Q 002208 571 EHKYEIVKKLQE-RK------HICGMTGDGVNDAPALKKADIGIAVADATD 614 (953)
Q Consensus 571 ~~K~~iV~~lq~-~g------~~V~~~GDG~ND~paLk~AdVGIamg~~t~ 614 (953)
+.|.+.++.+.+ .| ..|.|+||+.||.+|++.|++++++.....
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~ 208 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPG 208 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHH
Confidence 667766654432 34 689999999999999999999999964443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.19 E-value=3.2e-06 Score=89.89 Aligned_cols=126 Identities=14% Similarity=0.165 Sum_probs=87.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+.++.|++.|+++.++|++.......+.+.+|+.... ....+.+... ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~-----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCcc-----------------CCCCCCHH
Confidence 46799999999999999999999999988888888888764321 0111111100 01112344
Q ss_pred HHHHHHHHhcccC-CEEEEEcCCccCHHhhhhCC---eeEEecCc------------------------hHHHhhc-cCE
Q 002208 572 HKYEIVKKLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARGA-SDI 622 (953)
Q Consensus 572 ~K~~iV~~lq~~g-~~V~~~GDG~ND~paLk~Ad---VGIamg~~------------------------t~~a~~a-aDi 622 (953)
--..+.+.+.-.. ..|+++||+.||..|++.|+ +++++|++ .+..+.+ ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4456667776555 67999999999999999999 66777654 2334444 999
Q ss_pred eecCCCchhHHHHHH
Q 002208 623 VLTEPGLSVIISAVL 637 (953)
Q Consensus 623 vl~~~~~~~i~~ai~ 637 (953)
++ +++..+...+.
T Consensus 245 v~--~~~~el~~~l~ 257 (267)
T 1swv_A 245 TI--ETMQELESVME 257 (267)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred ec--cCHHHHHHHHH
Confidence 98 45777776663
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.8e-06 Score=87.89 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=89.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDV-----------------SYGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGS-----------------SCCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccC-----------------CCCCCChH
Confidence 46789999999999999999999999999999999999986421 111111100 01112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe---eEEec-CchHHHhhc-cCEeecCCCchhHHHHHHHh
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARGA-SDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV---GIamg-~~t~~a~~a-aDivl~~~~~~~i~~ai~~g 639 (953)
--..+.+.+.-....|+++||+.||..|++.|++ +|++| ++.+..+.. ||+++ +++..+...++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 3345555555555679999999999999999999 66666 555555554 99988 5677887777543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.14 E-value=9.8e-06 Score=86.94 Aligned_cols=66 Identities=27% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++..+++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 576666665442 245899999999999999999999999999999999999998888888888774
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.14 E-value=5.9e-07 Score=101.65 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=75.5
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
..++|++.+.|+.|+++|++|+++||.....++.+|+++|+.-++.+ ..+.|......-++.-..++ .....-+..
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~-~~Vig~~l~~~~dG~~tg~~---~~~~p~~~~ 295 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE-EKVLGLRLMKDDEGKILPKF---DKDFPISIR 295 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG-GGEEEECEEECTTCCEEEEE---CTTSCCCST
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc-ceEEEeEEEEecCCceeeee---cCccceeCC
Confidence 45789999999999999999999999999999999999997543322 22222221100000000000 000011346
Q ss_pred HHHHHHHHHhccc---CCEEEEEcCCccCHHhhhh-CCeeEEe
Q 002208 571 EHKYEIVKKLQER---KHICGMTGDGVNDAPALKK-ADIGIAV 609 (953)
Q Consensus 571 ~~K~~iV~~lq~~---g~~V~~~GDG~ND~paLk~-AdVGIam 609 (953)
+.|.+.++.+-+. ...++++|||.||.|||++ +|.++++
T Consensus 296 ~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 296 EGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp HHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 7899999876432 2347888999999999996 6666665
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.14 E-value=5e-06 Score=86.20 Aligned_cols=123 Identities=12% Similarity=0.051 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+... +..+.+++|+.... ...+.+... ....-.|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL-----------------AKGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC-----------------CCCCCChH
Confidence 3789999999999999999999999755 67778888875321 111111000 01111222
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|+|+||+.||+.|.+.|+++++|.++.+..+ .||+++.+.+-..+..++
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~ 214 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLH 214 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHH
Confidence 2345666666556779999999999999999999999987666666 899998654433333333
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.8e-06 Score=87.09 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+.+++.+.++.+++.|+++.++|+..........+.+|+.... ...+...... ...-.|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC-----------------CCCCChHH
Confidence 4689999999999999999999999988888888888875321 1111110000 00111233
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe----cCchHHHhhc-cCEeecCCCchhHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGA-SDIVLTEPGLSVIISAV 636 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam----g~~t~~a~~a-aDivl~~~~~~~i~~ai 636 (953)
-..+.+.+.-....|.++||+.||.+|++.|++++++ +++.+..+.. ||+++. ++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 3455566655556789999999999999999999887 3444444544 899884 445555444
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.8e-06 Score=87.08 Aligned_cols=126 Identities=9% Similarity=0.012 Sum_probs=92.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEeccc-----------------CCCCcCHH
Confidence 46789999999999999999999999999999999999986421 111111100 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe----cCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam----g~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
--..+.+.+.-....|.|+||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 44556666665556799999999999999999999999 555555667799998 567788877754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.07 E-value=3.7e-06 Score=88.62 Aligned_cols=122 Identities=17% Similarity=0.146 Sum_probs=85.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.... ...-.|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~ 173 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHP 173 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCH
Confidence 357799999999999999999999999999999999999985321 1111111000 011124
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecC----chHHHhhccCEeecCCCchhHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VAD----ATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~----~t~~a~~aaDivl~~~~~~~i~ 633 (953)
+--..+.+.+.-....|+|+||+.||++|.+.|++++. +.. +.+..+..+|+++. ++..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 44555666666556679999999999999999999844 443 23445678999884 455544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.5e-06 Score=94.25 Aligned_cols=131 Identities=17% Similarity=0.172 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHHHHhc-CCcEEEEcCC---------------------CHHHHHHHHHHhCCCCCCCCCccccCcccccc
Q 002208 492 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSASLLGQDKDAS 549 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~a-GI~v~miTGD---------------------~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~ 549 (953)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999988 9999888876 3334444455555421110000000000
Q ss_pred cCchhHHHHHHhcCcEeecCH--HHHHHHHHHhcc----cCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEe
Q 002208 550 IAALPVEELIEKADGFAGVFP--EHKYEIVKKLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623 (953)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~~P--~~K~~iV~~lq~----~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDiv 623 (953)
....+..+.| ..|...++.+.+ ....|+|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0001233333 245555554433 23569999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHH
Q 002208 624 LTEPGLSVIISAVL 637 (953)
Q Consensus 624 l~~~~~~~i~~ai~ 637 (953)
+.+++-.++..+++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98887778887774
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.05 E-value=4.8e-06 Score=86.98 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=87.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ...+.+... ....-.|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 169 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLD-----------------GTRVNKN 169 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTT-----------------SCCCCHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEecccc-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985321 111111000 0011123
Q ss_pred HHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCe---eEEecCchHH--HhhccCEeecCCCchhHHHHH
Q 002208 571 EHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 ~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdV---GIamg~~t~~--a~~aaDivl~~~~~~~i~~ai 636 (953)
+--..+.+.+.-. ...|+++||+.||..|.+.|++ +|++|++... .+..+|+++. ++..+...+
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 3334555666655 6679999999999999999999 7776654433 3578999984 466666544
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.2e-06 Score=85.69 Aligned_cols=125 Identities=11% Similarity=0.076 Sum_probs=89.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.|++.+.++.|++.|+++.++|+........+.+.+|+.... ...+.+... ....-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEV-----------------RLFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhc-----------------ccCCCCh
Confidence 357899999999999999999999999999999999999985321 111111000 0112234
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe----cCchHHHhhccCEeecCCCchhHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam----g~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+--..+.+.+.-....|.++||+.||..|.+.|++++++ +++.+..+..+|+++. ++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 444556666665566799999999999999999999999 3444555668899884 466665543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=4.2e-06 Score=84.30 Aligned_cols=119 Identities=17% Similarity=0.096 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|++...... ..+.+|+.... ...+..... ....-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSG-----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcC-----------------CCCCCCcH
Confidence 46799999999999999999999999988877 88888874311 011111000 00111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.++-....|+++||+.||.+|++.|+++ |+|++|. . .||+++. ++..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 33466666665566799999999999999999997 8888766 2 6898874 455665543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.03 E-value=7.4e-06 Score=84.92 Aligned_cols=125 Identities=15% Similarity=0.105 Sum_probs=88.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+.... ...+.+.+. ....-.|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~ 142 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTF-----------------GEKKPSP 142 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSS-----------------CTTCCTT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcC-----------------CCCCCCh
Confidence 356899999999999999999999999999899999999975321 111111100 0112235
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCc--hHHHhhccCEeecCCCchhHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~--t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
+--..+.+.+.-....|+|+||+.||.+|.+.|++. |++..| .... ..+|+++ +++..+...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 555666677766666799999999999999999988 666432 2222 5788887 45777776654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.02 E-value=2.1e-06 Score=91.28 Aligned_cols=55 Identities=24% Similarity=0.188 Sum_probs=45.0
Q ss_pred HHHHHHHHhccc-----CCEEEEEcCCccCHHhhhhCCeeEEecCch-HHHhhccCEeecC
Q 002208 572 HKYEIVKKLQER-----KHICGMTGDGVNDAPALKKADIGIAVADAT-DAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~-----g~~V~~~GDG~ND~paLk~AdVGIamg~~t-~~a~~aaDivl~~ 626 (953)
.|..-++.+.+. ...|+++||+.||.+||+.|++||+||++. +..++.||+++.+
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 477766666433 357999999999999999999999999988 6788889887654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-05 Score=81.98 Aligned_cols=124 Identities=18% Similarity=0.142 Sum_probs=90.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+..........+.+|+.... ...+.+... ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecccc-----------------CCCCcCHH
Confidence 5679999999999999 999999999999899999999885321 111110000 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCC---eeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~Ad---VGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
--..+.+.+.-....|+++||+. ||..|.+.|+ ++++++++.+..+..+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 44556666665567799999997 9999999999 67777777777777999998 45777776663
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.3e-05 Score=82.87 Aligned_cols=123 Identities=9% Similarity=0.070 Sum_probs=84.7
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
+.|++.+.++.|++.|+++.++|+.. ........+.+|+.... ...+.+.+. ....-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEV-----------------LSYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TCCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheecccc-----------------CCCCCC
Confidence 57999999999999999999999999 88888888888875321 111110000 011122
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEe---cCchHHHhhccCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIam---g~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
|+--..+.+.+.-....|+++||+. ||..|++.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 229 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVI 229 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHH
Confidence 3433455566655556799999999 999999999999999 333333344578877 4566676655
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=84.39 Aligned_cols=139 Identities=14% Similarity=0.046 Sum_probs=90.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHH--hcCcEeec
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE--KADGFAGV 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~vfar~ 568 (953)
-++.|++.++++.|+++|+++.++|+.....+..+.+ |+... ..++ +.+.... +..+..... +...+-+-
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~-~~~~~~~--~~~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIY-CNHASFD--NDYIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEE-EEEEECS--SSBCEEECTTCCCTTCCSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEE-eeeeEEc--CCceEEecCCCCccccccc
Confidence 3688999999999999999999999999888888877 76321 1122 1111000 000000000 00101111
Q ss_pred CHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhc--cCEeecCCCchhHHHHHHHh
Q 002208 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGA--SDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~a--aDivl~~~~~~~i~~ai~~g 639 (953)
...+|..+++.+......+.|+||+.||++|.+.|++.++..+..+..+.. +|+++ +++..+...+...
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 245788999999888889999999999999999999998753222333333 77776 5688887777543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=84.15 Aligned_cols=126 Identities=15% Similarity=0.099 Sum_probs=84.0
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.++.|++.|+++.++|+.....+...-+. |+.....+...+.+.... ...-.|
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~ 169 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNP 169 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCCh
Confidence 35779999999999999999999999887777766666 775321101122111110 112223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCchH----HHhhccCEeecCCCchhHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t~----~a~~aaDivl~~~~~~~i~~ai 636 (953)
+--..+.+.+.-....|+|+||+.||..|.+.|+++ |++..+.. ..+..||+++ +++..+...+
T Consensus 170 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l 238 (243)
T 3qxg_A 170 EPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSW 238 (243)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHH
Confidence 444455666665566799999999999999999994 45554332 2334699998 5577776655
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.3e-05 Score=83.61 Aligned_cols=127 Identities=12% Similarity=0.027 Sum_probs=81.8
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.++.|++.|+++.++|+..........+. |+.....+...+.+... ....-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 46789999999999999999999999987777777777 77532110111111110 0112233
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCch----HHHhhccCEeecCCCchhHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT----DAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t----~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
+--..+.+.+.-....|.|+||+.||..|.+.|+++ |++..|. +..+..||+++ +++..+...+.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 444456666665566799999999999999999975 4444332 22234799998 45666666553
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.96 E-value=1.5e-05 Score=84.72 Aligned_cols=126 Identities=12% Similarity=0.117 Sum_probs=86.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ...+.+.... ...-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVV-----------------RGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSS-----------------SCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcC-----------------CCCCCHH
Confidence 567899999999999999999999999998899988888753211 1111111000 1111233
Q ss_pred HHHHHHHHhcccC-CEEEEEcCCccCHHhhhhCC---eeEEecC------------------------chHHHhh-ccCE
Q 002208 572 HKYEIVKKLQERK-HICGMTGDGVNDAPALKKAD---IGIAVAD------------------------ATDAARG-ASDI 622 (953)
Q Consensus 572 ~K~~iV~~lq~~g-~~V~~~GDG~ND~paLk~Ad---VGIamg~------------------------~t~~a~~-aaDi 622 (953)
--..+.+.+.-.. ..|+|+||+.||..|.+.|+ |+|++|. +.+..++ .+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 3345666666666 78999999999999999999 5566663 2233343 4999
Q ss_pred eecCCCchhHHHHHH
Q 002208 623 VLTEPGLSVIISAVL 637 (953)
Q Consensus 623 vl~~~~~~~i~~ai~ 637 (953)
++ +++..+...+.
T Consensus 253 v~--~~~~el~~~l~ 265 (277)
T 3iru_A 253 VI--DSVADLETVIT 265 (277)
T ss_dssp EE--SSGGGTHHHHH
T ss_pred Ee--cCHHHHHHHHH
Confidence 98 45777776664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.95 E-value=6.6e-06 Score=83.43 Aligned_cols=121 Identities=14% Similarity=0.083 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 46899999999999999999999999999999999999985321 111111100 01112344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-C-chHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~-~t~~a~~aaDivl~~~~~~~i~ 633 (953)
--..+.+.+.-....|+++||+.||..|.+.|++++++. . +....+..+|+++. ++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 445566666655667999999999999999999988884 2 24444477899884 344443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=7.8e-06 Score=87.95 Aligned_cols=129 Identities=11% Similarity=0.010 Sum_probs=87.8
Q ss_pred CCCCCCHHHHHHHHHhcCC--cEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 491 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI--~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
-++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ...+.+..... ....+.-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~-------------~~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRT-------------DTLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSC-------------SSCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCC-------------cccCCCc
Confidence 3578999999999999999 99999999999999999999986421 11111110000 0011122
Q ss_pred CHHHHHHHHHHhcccC-CEEEEEcCCccCHHhhhhCCeeEEecCchHHH------hhccCEeecCCCchhHHHHH
Q 002208 569 FPEHKYEIVKKLQERK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~g-~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a------~~aaDivl~~~~~~~i~~ai 636 (953)
.|+-=..+.+.+.-.. ..|.|+||+.||..|.+.|++|.+|+.+.+.. ...||+++ +++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 3343445556666555 78999999999999999999999986433322 33788888 4465555443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.6e-05 Score=82.34 Aligned_cols=121 Identities=9% Similarity=0.057 Sum_probs=83.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEccccc-----------------CCCCCChH
Confidence 46899999999999999999999999999999999999985321 111111100 01112234
Q ss_pred HHHHHHHHhcccCC-EEEEEcCCccCHHhhhhCCe-eEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~-~V~~~GDG~ND~paLk~AdV-GIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-... .|+++||+.||..|.+.|++ +|.++++.+ ..+|+++ +++..+...+
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l 225 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFI 225 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHH
Confidence 44556666666555 79999999999999999997 677776554 3567776 4577766655
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=2.1e-05 Score=81.30 Aligned_cols=123 Identities=11% Similarity=0.065 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.... . ..+.+.+. ..+..|
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~------------------~~~~k~ 152 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDA------------------LDRNEL 152 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTC------------------SSGGGH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCC------------------cCccch
Confidence 3679999999999999 9999999999999888888999886421 1 11111110 000011
Q ss_pred --HHHHHHHHHhc--ccCCEEEEEcCCccCHHhhhhCCe---eEEecCchHHHh-h-ccCEeecCCCchhHHHHH
Q 002208 571 --EHKYEIVKKLQ--ERKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR-G-ASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 --~~K~~iV~~lq--~~g~~V~~~GDG~ND~paLk~AdV---GIamg~~t~~a~-~-aaDivl~~~~~~~i~~ai 636 (953)
+--..+.+.+. -....|+|+||+.||.+|.+.|++ +|+.+.+..... . .+|+++.+ +..+...+
T Consensus 153 ~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 153 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 11133445554 344579999999999999999994 444454433322 2 38998854 44444443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=2e-05 Score=82.23 Aligned_cols=124 Identities=12% Similarity=0.055 Sum_probs=85.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDL-----------------KIYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEcccc-----------------CCCCCCHH
Confidence 57799999999999999999999999999999999999985321 111111100 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe---cCchHHHhhcc-CEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARGAS-DIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam---g~~t~~a~~aa-Divl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|.++||+.||..|.+.|++.... +++.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 44556666665556789999999999999999965443 43333334456 8887 4566666654
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=7.2e-05 Score=75.56 Aligned_cols=136 Identities=11% Similarity=0.164 Sum_probs=82.9
Q ss_pred CCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCCh-hhh-hcCcceEEeecCCCCCceEEE
Q 002208 336 GTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADP-KEA-RAGIREVHFFPFNPVDKRTAL 413 (953)
Q Consensus 336 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~-~~~-~~~~~~l~~~pF~s~~kr~sv 413 (953)
||||+|+++|.+...-.-..+.+.++++.+++.++...+ ||+..|++.++... ... .......+..|- +-...
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPG----CGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETT----TEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEecc----ceEEE
Confidence 899999999988653111124577888888887766555 99999999876421 000 011111222221 11222
Q ss_pred EEEcCCC-----------------------------------------------cEEEEEeCcHHHHHHHhhccHHHHHH
Q 002208 414 TYIDSDG-----------------------------------------------HWHRASKGAPEQILALCNAKEDLKKK 446 (953)
Q Consensus 414 ~~~~~~g-----------------------------------------------~~~~~~KGa~e~il~~~~~~~~~~~~ 446 (953)
.+...++ +.+.+..|+++.+.+..- .+.+.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 2211000 115678899998754211 11223
Q ss_pred HHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCC
Q 002208 447 VHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDP 492 (953)
Q Consensus 447 ~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~ 492 (953)
+...+.++..+|..++.+|... +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4455677788999999999865 89999999995
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.84 E-value=1.3e-05 Score=83.12 Aligned_cols=124 Identities=9% Similarity=0.051 Sum_probs=86.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEeccc-----------------CCCCCCHH
Confidence 47799999999999999999999999999889999999985321 111111100 01223344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec----CchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg----~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|.|+||+.||..|.+.|++++++- +..+..+..+|+++. ++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 455666666655567899999999999999999998882 222334456888873 455555443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.8e-05 Score=83.63 Aligned_cols=129 Identities=16% Similarity=0.042 Sum_probs=87.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ....+.+.... ....-.|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~ 171 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHP 171 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSS
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCCh
Confidence 346789999999999999999999999999999999999874210 00011110000 0111223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCc-------h-HHHhhccCEeecCCCchhHHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~-------t-~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
+--..+.+.+.-....|+++||+.||..|.+.|+++ |.+..| . +..+..+|+++ +++..+...+..
T Consensus 172 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 172 DLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 333455566655556799999999999999999998 555433 2 23334589998 567777777743
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.9e-05 Score=77.50 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=82.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHhC--CCCCCCCCccccCcccccccCchh
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSASLLGQDKDASIAALP 554 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lG--i~~~~~~~~~l~~~~~~~~~~~~~ 554 (953)
++.|++.+++++|++.|+++.++|+... ..+....+++| +..-.. ....+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~-------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFM--CPHGPDDG-------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEE--ECCCTTSC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE--cCCCCCCC--------
Confidence 5789999999999999999999999875 55566677777 321000 00000000
Q ss_pred HHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe---eEEecCchHHHh----hccCEeecCC
Q 002208 555 VEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----GASDIVLTEP 627 (953)
Q Consensus 555 ~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV---GIamg~~t~~a~----~aaDivl~~~ 627 (953)
..+..-.|+-=..+.+.+.-....+.|+||+.||..|.++|++ +|..|.+..... ..+|+++ +
T Consensus 97 --------~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 97 --------CACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp --------CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 0011122333345556666566779999999999999999995 666665555444 4579988 4
Q ss_pred CchhHHHHHH
Q 002208 628 GLSVIISAVL 637 (953)
Q Consensus 628 ~~~~i~~ai~ 637 (953)
++..+...+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5777766653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=76.71 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=84.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... ....-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFE-----------------GVKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCC-----------------CCCCCCHH
Confidence 46799999999999999999999999988888899999975321 111111100 01112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEe---cCchHHHhh---ccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARG---ASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIam---g~~t~~a~~---aaDivl~~~~~~~i~~ai 636 (953)
-=..+.+.+.-....|.|+||+. ||..|.+.|+++.+. |.+...... .+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l 224 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVL 224 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHH
Confidence 33455566655556799999998 999999999998655 333333332 689887 4566666655
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.74 E-value=1.4e-05 Score=84.30 Aligned_cols=67 Identities=12% Similarity=0.224 Sum_probs=54.3
Q ss_pred eecCHH--HHHHHHHHhcccCCEEEEEcCCccCHHhhhhC--CeeEEecCchHHHhhccCEeecC-CCchhHHHHHH
Q 002208 566 AGVFPE--HKYEIVKKLQERKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARGASDIVLTE-PGLSVIISAVL 637 (953)
Q Consensus 566 ar~~P~--~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~A--dVGIamg~~t~~a~~aaDivl~~-~~~~~i~~ai~ 637 (953)
..+.|. .|..-++.+.+.-. |+++||+.||.+||+.| +.||||+++ ++.||+++.+ ++-.++..+++
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 344444 69999988877633 99999999999999999 999999997 6789999877 66667776664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.73 E-value=6.9e-05 Score=77.49 Aligned_cols=123 Identities=14% Similarity=0.098 Sum_probs=86.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|+ .|+++.++|+.........-+.+|+.... ...+.+... ....-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDL-----------------GVLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccC-----------------CCCCCCHH
Confidence 56799999999999 99999999999998888888999985321 111111100 01112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEecCchH--HHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIamg~~t~--~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|+++||+. ||..|.+.|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 33445555555556799999995 99999999999999964332 4556799998 4566665544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.73 E-value=2.2e-05 Score=84.34 Aligned_cols=66 Identities=21% Similarity=0.256 Sum_probs=55.8
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++..+++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 566666665443 346999999999999999999999999999999999999998887788888774
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.70 E-value=5.5e-05 Score=81.18 Aligned_cols=115 Identities=16% Similarity=-0.005 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.. . ...+.+.+.. ...-.|
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~ 173 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHP 173 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSS
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCCh
Confidence 3579999999999999 99999999999998899989998852 1 1122111100 011123
Q ss_pred HHHHHHHHHhcc-------cCCEEEEEcCCccCHHhhhhCCeeEEe---cCchHH-HhhccCEeecC
Q 002208 571 EHKYEIVKKLQE-------RKHICGMTGDGVNDAPALKKADIGIAV---ADATDA-ARGASDIVLTE 626 (953)
Q Consensus 571 ~~K~~iV~~lq~-------~g~~V~~~GDG~ND~paLk~AdVGIam---g~~t~~-a~~aaDivl~~ 626 (953)
+--..+.+.+.- ....|+++||+.||..|++.|++++++ +++.+. .+..||+++.+
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 333456666665 556799999999999999999977666 433333 33358998754
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.69 E-value=1e-05 Score=82.55 Aligned_cols=119 Identities=11% Similarity=0.068 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+.... ...+.+.+. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 4689999999999999 999999999988888888888874211 011111000 01111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecC----chHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~----~t~~a~~aaDivl~~~~~~~i~ 633 (953)
--..+.+.++-....|+++||+.||.+|.+.|++++++.+ +.+..+. +|+++. ++..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 3455666666555679999999999999999999999832 2344454 999884 344443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.68 E-value=2.3e-05 Score=82.41 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.+.++.|++.|+++.++|+.........- +..|+.... ...+.+.+.+ .....-.|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f--~~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF--SHIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS--SCEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe--eeEEecchhh---------------ccCCCCCh
Confidence 57899999999999999999999999866544432 223332110 1111111000 00111122
Q ss_pred HHHHHHHHHhcccC--CEEEEEcCCccCHHhhhhCC---eeEEecCchHHHhhccCEeecCCCchhHH
Q 002208 571 EHKYEIVKKLQERK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 571 ~~K~~iV~~lq~~g--~~V~~~GDG~ND~paLk~Ad---VGIamg~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
+--..+.+.+.-.. ..|+|+||+.||..|.+.|+ ++|+++++.+..+..||+++. ++..+.
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el~ 240 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDFQ 240 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGCC
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHhh
Confidence 22234444444333 67999999999999999999 566667777778889999984 444443
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.67 E-value=3.3e-05 Score=84.50 Aligned_cols=66 Identities=26% Similarity=0.299 Sum_probs=56.7
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeec-CCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLT-EPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~-~~~~~~i~~ai~ 637 (953)
.|...++.+.+. ...|+++||+.||.+|++.|++||+|+++.+..++.||+++. +++-.++..+++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 677777766543 346899999999999999999999999999999999999998 888888888774
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.67 E-value=8e-05 Score=78.55 Aligned_cols=122 Identities=14% Similarity=0.133 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEcccc-----------------CCCCCCHH
Confidence 67899999999999 9999999999999999999999975321 111111100 01222344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCc---------------------------hHHHhhccCEee
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARGASDIVL 624 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~---------------------------t~~a~~aaDivl 624 (953)
--..+.+.+.-....|.|+||+.||..|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 45566666665556799999999999999999999988644 122345689888
Q ss_pred cCCCchhHHHHH
Q 002208 625 TEPGLSVIISAV 636 (953)
Q Consensus 625 ~~~~~~~i~~ai 636 (953)
+++..+...+
T Consensus 232 --~~~~el~~~l 241 (253)
T 1qq5_A 232 --PALGDLPRLV 241 (253)
T ss_dssp --SSGGGHHHHH
T ss_pred --CCHHHHHHHH
Confidence 4577776655
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.67 E-value=2.9e-05 Score=84.13 Aligned_cols=66 Identities=21% Similarity=0.292 Sum_probs=56.3
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
+|..-++.+.+. ...|+++||+.||.+|++.|++||+|+++.+..++.||+++.+++-.++..+++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 576666666543 346999999999999999999999999999999999999998888888888875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00011 Score=75.90 Aligned_cols=124 Identities=10% Similarity=0.077 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+.....+...-+.+|+.... ...+.+... ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDT-----------------GFQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TSCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEeccc-----------------CCCCCChH
Confidence 5779999999999999 999999999999888888999885321 111111000 01112233
Q ss_pred HHHHHHHHhc-ccCCEEEEEcCCc-cCHHhhhhCCeeE-EecCc--hHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQ-ERKHICGMTGDGV-NDAPALKKADIGI-AVADA--TDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq-~~g~~V~~~GDG~-ND~paLk~AdVGI-amg~~--t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
--..+.+.+. -....|+++||+. ||..|.+.|+++. .+..+ .+..+..+|+++ +++..+...+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 3334445554 3446799999998 9999999999954 44433 555677899998 45777777663
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.64 E-value=5.4e-05 Score=77.71 Aligned_cols=118 Identities=12% Similarity=0.036 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.+.++.|++.| +++.++|+........+.+.+|+.... ...+. ...-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~----------------------~~kpk~ 160 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--DHIEV----------------------MSDKTE 160 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--SEEEE----------------------ESCCSH
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--heeee----------------------cCCCCH
Confidence 56799999999999999 999999999988888888999875321 00110 011123
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEe-------cCchHHHhhcc-CEeecCCCchhHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAV-------ADATDAARGAS-DIVLTEPGLSVIISA 635 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIam-------g~~t~~a~~aa-Divl~~~~~~~i~~a 635 (953)
+-=..+.+.+.-....|+++||+. ||..|.+.|++++++ |++....+..+ |+++ +++..++..
T Consensus 161 ~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~ 232 (234)
T 3ddh_A 161 KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSL 232 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHH
T ss_pred HHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHh
Confidence 333445555555556799999996 999999999999887 22333323344 8887 456666554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.64 E-value=8.2e-05 Score=74.25 Aligned_cols=107 Identities=13% Similarity=0.018 Sum_probs=72.0
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+.|++.+.++.|++.|+++.++|++.. .+....+++|+.... ...+.+... ....-.|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSG-----------------FKRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGC-----------------CCCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeecccc-----------------CCCCCCHHH
Confidence 679999999999999999999999865 466777788874311 011111000 001112333
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 621 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD 621 (953)
-..+.+.+.-. .|.++||+.||.+|++.|++++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 34555555544 689999999999999999999988655555555544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.63 E-value=8.5e-05 Score=77.52 Aligned_cols=123 Identities=10% Similarity=0.044 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ ..+.+... ....-.|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~~~~-----------------~~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGSDIN-----------------RKYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCHHHH-----------------TCCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEcCcC-----------------CCCCCCHH
Confidence 5679999999999997 99999999999999999999998411 11110000 01111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHH----------HhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDA----------ARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~----------a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
-=..+.+.+.-....|+++||+.||..|.+.|+++++|.+.... .+..+|+++ +++..+...+..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 22344455544456799999999999999999999999642111 356789998 567788777643
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.62 E-value=8.4e-05 Score=76.41 Aligned_cols=122 Identities=10% Similarity=0.086 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe--ecC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA--GVF 569 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa--r~~ 569 (953)
++.+++.+.++.++. ++.++|+........+.+++|+.... +.....+.. . ... .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~-------------~----~~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKD-------------L----GADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHH-------------H----CTTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEeccc-------------c----ccCCCCcC
Confidence 457889998888774 99999999998888888998875311 011111000 0 000 112
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCchH-------HHhhc-cCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARGA-SDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t~-------~a~~a-aDivl~~~~~~~i~~ai 636 (953)
|+--..+.+.+.-....|+++||+.||.+|++.|+++ |+++++.+ ..++. ||+++. ++..+...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 3333455566655556799999999999999999998 77765443 35666 999984 466666554
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.62 E-value=5.9e-05 Score=79.06 Aligned_cols=121 Identities=13% Similarity=0.099 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ ..+.+ + . . ....-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~----~~~~~-~--------~----~----~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWD----MLLCA-D--------L----F----GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCS----EECCH-H--------H----H----TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcc----eEEee-c--------c----c----ccCCCCHH
Confidence 4678999999999985 99999999999888999999998411 11110 0 0 0 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecC-----ch---HH--HhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DA--ARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~-----~t---~~--a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|+|+||+.||..|.+.|+++++|.+ |. +. .+..+|+++ +++..+...+
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l 250 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHh
Confidence 4445566666555679999999999999999999999965 22 22 256789998 5577777665
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00011 Score=76.84 Aligned_cols=122 Identities=13% Similarity=0.149 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+.|++.+.++.|++.|+++.++|+.....+..+-+++|+. .. ..++.+.... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f--~~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF--DFALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC--SEEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce--eEEEecCCCC-----------------CCCCCHHH
Confidence 5689999999999999999999999988888888899874 21 1122111100 11111222
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee---EEecCch-HHH-hhccCEeecCCCchhHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIG---IAVADAT-DAA-RGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG---Iamg~~t-~~a-~~aaDivl~~~~~~~i~~ai 636 (953)
=..+.+.+.-....|.|+||+.||..|.+.|++. ++++.+. +.. +..+|+++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 2344455554556799999999999999999994 3444332 333 34688887 4466655443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=3.4e-05 Score=81.58 Aligned_cols=66 Identities=18% Similarity=0.157 Sum_probs=54.1
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhc-------cCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGA-------SDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~a-------aDivl~~~~~~~i~~ai~ 637 (953)
.|..-++.+.+. ...|+++||+.||.+|++.|++||+|+++.+..++. ||++..+++-.++..+++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 466666555433 346899999999999999999999999999999985 889998887788887774
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.59 E-value=8.5e-05 Score=75.23 Aligned_cols=120 Identities=10% Similarity=0.110 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhc-----------------CCCCCCHH
Confidence 46789999 9999999 999999999998888999999985321 111111100 01112344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-c---CchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g---~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.++ ...+.|+||+.||..|.+.|+++..+ . ++.+..+..+|+++. ++..+...+
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 4455666666 56789999999999999999999777 2 222333446888873 466665544
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00012 Score=75.34 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=83.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~---------------~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
++.|++.+++++|+++|+++.++|+.. ...+..+.+++|+.- ..........+. ....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~-~~~~--- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQG-SVEE--- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTC-SSGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCC-cccc---
Confidence 688999999999999999999999998 467778888888751 110110000000 0000
Q ss_pred HHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee--EEe--cCc-hHHHhhccCEeecCCCchh
Q 002208 557 ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARGASDIVLTEPGLSV 631 (953)
Q Consensus 557 ~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG--Iam--g~~-t~~a~~aaDivl~~~~~~~ 631 (953)
......+..-.|+--..+.+.+.-....++|+||+.||..+.++|++. |.+ |.. .+.....+|+++ +++..
T Consensus 123 --~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 123 --FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp --GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred --cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 000001122234444455566655556789999999999999999964 444 322 233344689988 45777
Q ss_pred HHHHHH
Q 002208 632 IISAVL 637 (953)
Q Consensus 632 i~~ai~ 637 (953)
+...+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776653
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.54 E-value=9.4e-05 Score=76.34 Aligned_cols=122 Identities=14% Similarity=0.062 Sum_probs=82.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++ |+++.++|+..........+.++-. -...+.+. + .......|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~----fd~i~~~~---------~--------~~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE----FDHIITAQ---------D--------VGSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC----CSEEEEHH---------H--------HTSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc----cCEEEEcc---------c--------cCCCCCCHH
Confidence 678999999999999 8999999999887777665554311 11111110 0 012233455
Q ss_pred HHHHH---HHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEecCch-----------HHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEI---VKKLQERKHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~i---V~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIamg~~t-----------~~a~~aaDivl~~~~~~~i~~ai 636 (953)
-.... .+.+.-....|.|+||+. ||..|.+.|++++++.+.. +..+..+|+++ +++..+...+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 44455 444554556799999996 9999999999999995322 33457899998 4577776665
Q ss_pred H
Q 002208 637 L 637 (953)
Q Consensus 637 ~ 637 (953)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00018 Score=72.55 Aligned_cols=93 Identities=12% Similarity=0.010 Sum_probs=67.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.+++++|++.|+++.++||.. ...+..+.+.+|+..... ... +++.-.|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~--~~~----------------------~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV--HRE----------------------IYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE--EEE----------------------ESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc--eeE----------------------EEeCchH
Confidence 578999999999999999999999998 788999999999853210 000 0011113
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+.-..+.+.+.-....++|+||+.||+.+.++|++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 33334455555445678999999999999999988543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.49 E-value=7.9e-05 Score=79.31 Aligned_cols=66 Identities=26% Similarity=0.301 Sum_probs=53.3
Q ss_pred HHHHHHHHhcc----cCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~----~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|...++.+.+ ....|+++||+.||.+|++.|++|++|+++.+..+..||+++.+.+-.++..+++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 45555544433 3456899999999999999999999999999989999999998776666887764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00035 Score=70.51 Aligned_cols=137 Identities=15% Similarity=0.096 Sum_probs=93.5
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCH---HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
-++.|++.++++.|+++|+++.++|+-.. ..+..+-+.+|+.... ..++...+... ...+..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 36889999999999999999999998765 8888999999985321 11111110000 001223
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCC-ccCHHhhhhCCeeEEe-cCchH-----HHh-hccCEeecCCCchhHHHHHHHh
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDG-VNDAPALKKADIGIAV-ADATD-----AAR-GASDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG-~ND~paLk~AdVGIam-g~~t~-----~a~-~aaDivl~~~~~~~i~~ai~~g 639 (953)
-.|+--..+.+.+.-....++|+||+ .+|..+-++|++.... ..+.. ... ..+|.++...++..+..+++..
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 34555556667776666779999999 7999999999997554 33321 111 2678999767899988888665
Q ss_pred HHH
Q 002208 640 RAI 642 (953)
Q Consensus 640 R~~ 642 (953)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00011 Score=78.16 Aligned_cols=124 Identities=15% Similarity=0.184 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... ...+.+.+ .....-.|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~-----------------~~~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEA-----------------AGWPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHH-----------------HSSCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeecc-----------------cCCCCCCHH
Confidence 36799999999999999999999987664 57778888875321 11111000 012223455
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEecCchHH------HhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAVADATDA------ARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIamg~~t~~------a~~aaDivl~~~~~~~i~~ai~ 637 (953)
--..+.+.+.-....|.|+||+. ||+.|.+.|++++++.+.... ....+|+++ +++..+...+.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 55666777766667799999997 999999999999999532211 223689888 45777776663
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00021 Score=73.06 Aligned_cols=119 Identities=9% Similarity=0.020 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++ |+++.++|+.....+..+-+++|+.... ...+.+. .. ..-.|+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~--~~-----------------~Kp~p~ 141 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS--PE-----------------APHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC--SS-----------------CCSHHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeeecCC--CC-----------------CCCChH
Confidence 467999999999999 9999999999888888888899985321 1111110 00 000121
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe---eEEecCc-hHHHh-hccCEeecCCCchhHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-GASDIVLTEPGLSVIIS 634 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV---GIamg~~-t~~a~-~aaDivl~~~~~~~i~~ 634 (953)
-=..+.+.+.-....|+|+||+.||+.|.++|++ |+++|.+ .+..+ ..+|+++.+ +..+..
T Consensus 142 ~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 1123334444344569999999999999999999 6767654 33333 368998843 555543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00061 Score=71.44 Aligned_cols=118 Identities=14% Similarity=0.065 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+.... ...+. ...-.|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~i~~----------------------~~kp~~~ 166 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF--PRIEV----------------------VSEKDPQ 166 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC--CCEEE----------------------ESCCSHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC--ceeee----------------------eCCCCHH
Confidence 46799999999999 99999999999988888888888875321 01110 0111244
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEe-cCchH--------HHhhccCE-eecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAV-ADATD--------AARGASDI-VLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIam-g~~t~--------~a~~aaDi-vl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|+++||+. ||..|.+.|++++++ ..|.. .....+|+ ++ +++..+...+
T Consensus 167 ~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 240 (251)
T 2pke_A 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAV 240 (251)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHH
T ss_pred HHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHH
Confidence 44556666665566799999999 999999999999876 33321 11235787 66 4577776655
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00044 Score=69.64 Aligned_cols=99 Identities=14% Similarity=0.091 Sum_probs=71.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ...+.+.. .....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~-----------------~~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSA-----------------LGVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHH-----------------HSCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeecc-----------------cCCCCCCHH
Confidence 46799999999999999 99999999999889998999875321 11111000 001222344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
--..+.+.+.-....|.|+||+.||..|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 445566666655567999999999999999999998874
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00011 Score=74.67 Aligned_cols=102 Identities=6% Similarity=-0.023 Sum_probs=70.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH------hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcE
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... ...+.+. . ...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~---------~--------~~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASC---------Q--------MGK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHH---------H--------HTC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeec---------c--------cCC
Confidence 467899999999999 999999999888777776666 4553210 0111000 0 001
Q ss_pred eecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCch
Q 002208 566 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADAT 613 (953)
Q Consensus 566 ar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t 613 (953)
..-.|+--..+.+.+.-....|.++||+.||..|.+.|+++..+.++.
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 222344445666666656667999999999999999999999987543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0021 Score=65.45 Aligned_cols=124 Identities=17% Similarity=0.150 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+.... ...+.+.+. ....-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~~-----------------~~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQV-----------------KNGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGS-----------------SSCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--ccccccccc-----------------CCCcccHH
Confidence 45789999999999999999999999999999999999986421 111111110 01222344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE--Ee--c-CchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI--AV--A-DATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI--am--g-~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=....+.+.-..+.|.|+||..+|+.+-++|++.- ++ | +..+..+++.+.++.+ ...+++.+
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l 212 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHH
Confidence 444556666655667999999999999999999852 33 3 3334444444444433 34455544
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.002 Score=68.30 Aligned_cols=123 Identities=12% Similarity=0.132 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCC-----------------CCCCCCHH
Confidence 577999999999998 6999999999999889999999985321 111111110 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCC-ccCHHhhhhCCe--eEEecCchH---HHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDG-VNDAPALKKADI--GIAVADATD---AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG-~ND~paLk~AdV--GIamg~~t~---~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....++|+||. .||+.+-++|++ .|.+..+.. .....+|+++. ++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 4455566665555679999995 999999999999 677753321 12345788874 466666554
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0041 Score=63.15 Aligned_cols=95 Identities=9% Similarity=0.024 Sum_probs=62.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++||.....+..+.. . ....++.+.+.. ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 577999999999999999999999998877644433 1 111112111100 1122233
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCe-eEEec
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGVNDAPALKKADI-GIAVA 610 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdV-GIamg 610 (953)
-=....+.+.-. .+.+.|+||..+|+.+-++|++ .|++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 333444555443 2568999999999999999997 45664
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00046 Score=73.54 Aligned_cols=57 Identities=21% Similarity=0.319 Sum_probs=47.2
Q ss_pred HHHHHHHHh-cccCCEEEEEcC----CccCHHhhhhCC-eeEEecCchHHHhhccCEeecCCC
Q 002208 572 HKYEIVKKL-QERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 572 ~K~~iV~~l-q~~g~~V~~~GD----G~ND~paLk~Ad-VGIamg~~t~~a~~aaDivl~~~~ 628 (953)
.|..-++.| .-....|+++|| |.||.+||+.|+ +|++|+|+.+..|+.||+|..+++
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 476667766 222468999999 999999999999 699999999999999999886554
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00037 Score=65.55 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+++++|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+ .....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGE-----------------LGVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHH-----------------HSCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEecc-----------------CCCCCCCHH
Confidence 46788999999999999999999999888888888888875321 11111000 001222344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
--..+.+.+.-....+.|+||+.+|..+.++|++-.
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 444556666555557999999999999999998743
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00044 Score=71.45 Aligned_cols=108 Identities=19% Similarity=0.064 Sum_probs=65.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCcccccccCchhH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPV 555 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~ 555 (953)
.++.|++.+++++|++.|+++.++|+... .....+.+++|+.-+. ........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM---VLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee---EEEeecCCCCcee----
Confidence 56789999999999999999999999987 6777888888874110 0000000000000
Q ss_pred HHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 556 EELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 556 ~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
+. .....+..-.|+-=..+.+.+.-....++|+||+.||..+.+.|++..
T Consensus 128 -~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00 000001111122223344445444456999999999999999999864
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.00013 Score=73.81 Aligned_cols=102 Identities=7% Similarity=-0.015 Sum_probs=63.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.+.++.|++.|+++.++|+........+.+. +|+.... ...+. ... .....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f--~~~~~---------~~~--------~~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA--DHIYL---------SQD--------LGMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC--SEEEE---------HHH--------HTCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhe--eeEEE---------ecc--------cCCCCCCH
Confidence 4679999999999999999999998654332221111 2211000 00000 000 00112234
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCc
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADA 612 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~ 612 (953)
+--..+.+.+.-....+.++||+.||..|.+.|++...+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 193 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCS
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecC
Confidence 445566677766666799999999999999999998887543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00063 Score=71.65 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=41.7
Q ss_pred HHHHHHHHh-cccCCEEEEEcC----CccCHHhhhhCCe-eEEecCchHHHhhccCEe
Q 002208 572 HKYEIVKKL-QERKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARGASDIV 623 (953)
Q Consensus 572 ~K~~iV~~l-q~~g~~V~~~GD----G~ND~paLk~AdV-GIamg~~t~~a~~aaDiv 623 (953)
+|..-++.+ .-....|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 466555555 223468999999 9999999999988 999999999999999987
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0021 Score=65.94 Aligned_cols=117 Identities=18% Similarity=0.165 Sum_probs=75.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++. +++.++|+.... -+.+|+.... ...+.+ +. .....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~---------~~--------~~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCA---------ED--------LGIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEH---------HH--------HTCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEc---------cc--------cCCCCcCHH
Confidence 4679999999999998 999999987643 2334443110 000000 00 001122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEEe-c---CchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIAV-A---DATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIam-g---~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--..+.+.+.-....|+|+||+. ||..|.+.|+++.++ . +..+. +..+|+++ +++..+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l 226 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVL 226 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHH
Confidence 44556666665566799999998 999999999999887 2 22222 56789988 4577777665
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0024 Score=71.94 Aligned_cols=137 Identities=14% Similarity=0.099 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|+++|+++.++|+.....+..+-+.+|+........++.+.+... -.+..........-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~------~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc------cccccccccCCCCCCHH
Confidence 678999999999999999999999999999999999999864211001221111000 00000000000111222
Q ss_pred HHHHHHHHhc--------------ccCCEEEEEcCCccCHHhhhhCCee-EEecCch-------HHHhhccCEeecCCCc
Q 002208 572 HKYEIVKKLQ--------------ERKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARGASDIVLTEPGL 629 (953)
Q Consensus 572 ~K~~iV~~lq--------------~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t-------~~a~~aaDivl~~~~~ 629 (953)
-=....+.+. -....|+|+||+.+|+.|-++|++. |++..|. +.....+|+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 2122222222 2246799999999999999999986 4444321 22233689988 457
Q ss_pred hhHHHHH
Q 002208 630 SVIISAV 636 (953)
Q Consensus 630 ~~i~~ai 636 (953)
..+...+
T Consensus 367 ~eL~~~l 373 (384)
T 1qyi_A 367 GELRGVL 373 (384)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 7776655
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.013 Score=57.86 Aligned_cols=131 Identities=11% Similarity=0.078 Sum_probs=79.1
Q ss_pred CCCCceEEEEeeeehhcc--CCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhh--hcCcceEEeecCCCCCceEEE
Q 002208 338 LTLNKLSVDKNLIEVFAK--GVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEA--RAGIREVHFFPFNPVDKRTAL 413 (953)
Q Consensus 338 LT~n~m~v~~~~~~~~~~--~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~pF~s~~kr~sv 413 (953)
||+|+++|.+... +.. +.+.++++.+++..+..++ ||+..|++.++...... .......+.+|- +-+..
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPG----CGIGC 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETT----TEEEE
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecC----ccEEE
Confidence 8999999988653 211 2467888888887766555 99999999876421000 011222222221 12222
Q ss_pred EEEcC------------------------------CCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEE
Q 002208 414 TYIDS------------------------------DGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLA 463 (953)
Q Consensus 414 ~~~~~------------------------------~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~ 463 (953)
.+... ..+.+.+.-|+++.+.+..- .+...+...+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEE
Confidence 22211 01234677899998754211 1122344555677788999999
Q ss_pred EEEeccCCCCCCCCCCCcEEEEEeecCC
Q 002208 464 VARQEVPERTKESPGGPWQFVGLLPLFD 491 (953)
Q Consensus 464 vA~~~~~~~~~~~~e~~l~llG~i~i~D 491 (953)
+|... .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99865 7999999988
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0012 Score=68.15 Aligned_cols=106 Identities=8% Similarity=-0.033 Sum_probs=71.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH------hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcE
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
++.|++.+.++.|++. +++.++|+........+.+. .|+.... ...+.+ .+ ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~---------~~--------~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLS---------YE--------MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEH---------HH--------HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEee---------cc--------cCC
Confidence 4668999999999999 99999999998887766643 3432100 000000 00 012
Q ss_pred eecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHh
Q 002208 566 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (953)
Q Consensus 566 ar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~ 617 (953)
..-.|+-=..+.+.+.-....|.|+||+.||+.|.++|+++..+.++.+..+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 2334455556667776666779999999999999999999998865444333
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.01 Score=62.74 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (953)
+-+++.++|++|+++|++++++|| ..........+++|+.
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 346899999999999999999988 6677777777888885
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0033 Score=66.65 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=35.4
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (953)
.+.+-|++.++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 444557899999999999999999999 6666666777788875
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0092 Score=62.65 Aligned_cols=117 Identities=11% Similarity=0.099 Sum_probs=78.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.++.|++.|+++.+.|+... +..+-+.+|+.... ..++.+.+. ....-.|
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~F--d~i~~~~~~-----------------~~~KP~p 173 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKF--DFIADAGKC-----------------KNNKPHP 173 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGC--SEECCGGGC-----------------CSCTTSS
T ss_pred cccchhHHHHHHHHHhcccccccccccch--hhhHhhhccccccc--ceeeccccc-----------------CCCCCcH
Confidence 35779999999999999999988776543 55677888986421 112211111 0122234
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCchHHHhhccCEeecCCCchhH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVI 632 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~t~~a~~aaDivl~~~~~~~i 632 (953)
+-=..+.+.+.-....|+|+||..+|+.+-++|++ .|++++..+. ..||+++.+ +..+
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~~--l~eL 232 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEESS--GGGC
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEECC--hHhC
Confidence 44455666666556679999999999999999998 5666644332 358999844 4444
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.007 Score=64.07 Aligned_cols=85 Identities=15% Similarity=0.073 Sum_probs=62.8
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
.++.|++.+.++.|++.|+++.++||... ..+..--+++|+.... .. .++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~-----------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DK-----------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TT-----------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--cc-----------------------eeEe
Confidence 67889999999999999999999999864 4777777889986310 00 1122
Q ss_pred ecCHHHHHHHHHHhccc-CCEEEEEcCCccCHHhh
Q 002208 567 GVFPEHKYEIVKKLQER-KHICGMTGDGVNDAPAL 600 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~paL 600 (953)
|-....|....+.+.+. -.+|+++||-.+|.++-
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~~ 189 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGDA 189 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCGG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCcc
Confidence 22234577777777774 45789999999998873
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.096 Score=54.60 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (953)
+-++..++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 56889999999999999999999 99988888888888875
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.002 Score=64.18 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=62.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCc-ccccccCchh
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSASLLGQ-DKDASIAALP 554 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~~~-~~~~~~~~~~ 554 (953)
-++.|++.++++.|++.|+++.++|+- ....+..+.+++|+.- ..++.+. ......
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----d~v~~s~~~~~~~~---- 112 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF----DEVLICPHLPADEC---- 112 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE----EEEEEECCCGGGCC----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe----eEEEEcCCCCcccc----
Confidence 357899999999999999999999997 4667778888888751 1111110 000000
Q ss_pred HHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCc
Q 002208 555 VEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 612 (953)
Q Consensus 555 ~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~ 612 (953)
....-.|+-=..+.+.+.-....+.|+||..+|+.+-++|++- |.+..+
T Consensus 113 ---------~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 113 ---------DCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp ---------SSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ---------cccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 0000001100111222222334588999999999999999986 444443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.039 Score=58.20 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=37.0
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (953)
+++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5566899999999999999999999 88888888888888875
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.021 Score=58.88 Aligned_cols=113 Identities=9% Similarity=0.087 Sum_probs=71.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.| ++.++|+-....+..+.+++|+...... . +....
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~--~-----------------------~~~~~--- 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEG--R-----------------------VLIYI--- 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTT--C-----------------------EEEES---
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCe--e-----------------------EEecC---
Confidence 67899999999999999 9999999988888888888887421100 0 01111
Q ss_pred HHHHHHHHh--cccCCEEEEEcCCcc---CHHhhhhCCee-EEecCc-----hHHHhhc--cCEeecCCCchhHHHH
Q 002208 572 HKYEIVKKL--QERKHICGMTGDGVN---DAPALKKADIG-IAVADA-----TDAARGA--SDIVLTEPGLSVIISA 635 (953)
Q Consensus 572 ~K~~iV~~l--q~~g~~V~~~GDG~N---D~paLk~AdVG-Iamg~~-----t~~a~~a--aDivl~~~~~~~i~~a 635 (953)
.|..+.+.+ .-....++|+||+.| |..+-+.|++- |.+..| .+..++. +|+++. ++..+...
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~ 221 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEM 221 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGC
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHH
Confidence 121222222 224567999999999 65666777764 334332 2233333 898884 45555443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.017 Score=59.01 Aligned_cols=95 Identities=13% Similarity=0.036 Sum_probs=61.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+.... +..+.+.+|+.... ...+.+.+. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHH
Confidence 46799999999999999999999998664 67888888985321 111111000 01111222
Q ss_pred HHHHHHHHhcccCCEEEEEcCCcc-CHHhhhhCCeeEEe
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVN-DAPALKKADIGIAV 609 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~N-D~paLk~AdVGIam 609 (953)
--..+.+.+.-.. +|+||+.+ |..+-++|++....
T Consensus 155 ~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEE
Confidence 2234445444332 89999999 99999999987654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.012 Score=62.34 Aligned_cols=85 Identities=15% Similarity=0.056 Sum_probs=60.6
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcE
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
.+++.|++.+.++.|++.|+++.++||... ..+..--+++|+..-. ... ++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~-~~~------------------------Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE-ESA------------------------FY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS-GGG------------------------EE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc-ccc------------------------ee
Confidence 367889999999999999999999999854 5667777789986310 001 12
Q ss_pred eecCHHHHHHHHHHhccc-CCEEEEEcCCccCHHh
Q 002208 566 AGVFPEHKYEIVKKLQER-KHICGMTGDGVNDAPA 599 (953)
Q Consensus 566 ar~~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~pa 599 (953)
-|-.-..|....+.+.+. -.+|+++||-.+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 221123466666666665 3479999999999886
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.0043 Score=64.08 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=35.5
Q ss_pred HHHHhcccCCEEEEEcCC-ccCHHhhhhCCeeEEe---cCch-HHHh---hccCEeecC
Q 002208 576 IVKKLQERKHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---GASDIVLTE 626 (953)
Q Consensus 576 iV~~lq~~g~~V~~~GDG-~ND~paLk~AdVGIam---g~~t-~~a~---~aaDivl~~ 626 (953)
+.+.+.-....|+|+||+ .||..|++.|++++++ |.+. +..+ ..+|+++.+
T Consensus 185 ~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 185 ALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp HHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 344444445679999999 7999999999999654 4333 3333 368988743
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.024 Score=61.30 Aligned_cols=96 Identities=11% Similarity=-0.015 Sum_probs=67.3
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHH---HHHHHH--------hCCCCCCCCCccccCcccccccCchhHHH
Q 002208 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA---KETGRR--------LGMGTNMYPSASLLGQDKDASIAALPVEE 557 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA---~~ia~~--------lGi~~~~~~~~~l~~~~~~~~~~~~~~~~ 557 (953)
.+++|.|++.++++.|++.|+++.++||-....+ ...-+. .|+.. ...+.+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~----------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL----VMQCQREQG----------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC----SEEEECCTT-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc----hheeeccCC-----------
Confidence 4678899999999999999999999999875432 233333 67721 111111110
Q ss_pred HHHhcCcEeecCHHHHHHHHHHhcccC-CEEEEEcCCccCHHhhhhCCee
Q 002208 558 LIEKADGFAGVFPEHKYEIVKKLQERK-HICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 558 ~~~~~~vfar~~P~~K~~iV~~lq~~g-~~V~~~GDG~ND~paLk~AdVG 606 (953)
-.+-.|+-|..+.+.+.... ..++|+||..+|+.|-++|++-
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 01234778888888885544 3468999999999999999985
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.53 E-value=0.0072 Score=63.72 Aligned_cols=51 Identities=22% Similarity=0.217 Sum_probs=42.5
Q ss_pred HHHHHHHHhcccCCEEEEEcC----CccCHHhhhhCC-eeEEecCchHHHhhccCE
Q 002208 572 HKYEIVKKLQERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDI 622 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GD----G~ND~paLk~Ad-VGIamg~~t~~a~~aaDi 622 (953)
+|..-++.|.+....|+++|| |.||.+||+.|+ +|++|+++.|..+..+++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHH
Confidence 677777777666678999999 799999999996 899999999988865544
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.56 E-value=0.073 Score=56.13 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=35.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHhCCCC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~~ 533 (953)
++ |++.++|++++++|++++++| |..........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 888888888888888853
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=93.48 E-value=0.05 Score=57.59 Aligned_cols=114 Identities=13% Similarity=0.026 Sum_probs=73.5
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh---CCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL---GMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l---Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
-++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+.... ..++.+ + +...
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f--d~i~~~-~------------------~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFDT-K------------------IGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEECG-G------------------GCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc--cEEEec-C------------------CCCC
Confidence 368899999999999999999999999888777766543 353211 111111 0 0122
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEec-Cch---HHHhhccCEeec
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARGASDIVLT 625 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg-~~t---~~a~~aaDivl~ 625 (953)
-.|+-=..+.+.+.-....|+|+||..+|+.+-++|++- |.+. .+. +.....+|.++.
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 223333455666665556799999999999999999985 3443 221 112235677764
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.41 E-value=0.11 Score=54.07 Aligned_cols=110 Identities=9% Similarity=0.026 Sum_probs=71.5
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.++.|++.|+++.++|.... +..+-+.+|+.... ..++.+.+.. ...-.|
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p 152 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQLK-----------------NSKPDP 152 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGCS-----------------SCTTST
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--cccccccccc-----------------CCCCcH
Confidence 35779999999999999999999998654 45566778875321 1111111110 112223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCchHHHhhccCEeec
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARGASDIVLT 625 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t~~a~~aaDivl~ 625 (953)
+-=....+.+.-..+.|+|+||..+|+.+-++|++- |++..|. ..+|.++.
T Consensus 153 ~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 333445556655566799999999999999999973 4555442 24666653
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=92.89 E-value=0.059 Score=57.12 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=34.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (953)
.++-|++.++|+.|++.|+++.++||.. .......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4577999999999999999999999988 34444555677885
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.29 E-value=0.096 Score=57.49 Aligned_cols=120 Identities=15% Similarity=0.139 Sum_probs=71.8
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccc----cCchh-HHHHHH---
Q 002208 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDAS----IAALP-VEELIE--- 560 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~----~~~~~-~~~~~~--- 560 (953)
....+.|+..+.++.++++|++|+++||-.....+.+|..++..-++ +...+.|...... ..... ..+...
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeeccccccccccccccccccc
Confidence 34457899999999999999999999999999999999986432222 1222222211100 00000 001100
Q ss_pred ----hcCc--Ee-----ecCHHHHHHHHHHhccc-CCEEEEEcCCc-cCHHhhhh--CCeeEEe
Q 002208 561 ----KADG--FA-----GVFPEHKYEIVKKLQER-KHICGMTGDGV-NDAPALKK--ADIGIAV 609 (953)
Q Consensus 561 ----~~~v--fa-----r~~P~~K~~iV~~lq~~-g~~V~~~GDG~-ND~paLk~--AdVGIam 609 (953)
..+. -. ...-+-|..-++..-.. ...+++.||+. .|.+||.. ++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0000 11 12235687777765433 45689999994 79999965 5555554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=90.67 E-value=0.64 Score=50.00 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=34.9
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (953)
.+++-+++.+++++|++.|++++++| |.........-+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566889999999999999999999 57776666666777775
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.30 E-value=0.085 Score=53.98 Aligned_cols=90 Identities=16% Similarity=0.147 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHH----HHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe--
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKE----TGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA-- 566 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~----ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa-- 566 (953)
+.+++.+.++.|++.|+++.++|+.....+.. +.+..+... .+... ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 46789999999999999999999986432222 222222210 00000 0011
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEec
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVA 610 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg 610 (953)
.-.|+-..++.+.+ |- ++|+||..+|+.+-++|++- |.+.
T Consensus 145 KP~p~~~~~~~~~~---g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKSQWLQDK---NI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSHHHHHHT---TE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHHC---CC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 11233333444443 43 99999999999999999985 4443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=88.69 E-value=1.1 Score=46.10 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=30.9
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (953)
.+++-+++.++++.+++.|+++..+| |.........-+++|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555789999999999999999999 55555555555566764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=87.98 E-value=0.43 Score=54.97 Aligned_cols=98 Identities=6% Similarity=-0.051 Sum_probs=61.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC------CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcE
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD------QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD------~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
++.|++.++++.|++.|+++.++|+- ......... .|+... -..++.+.+. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~--fd~i~~~~~~-----------------~~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH--FDFLIESCQV-----------------GM 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT--SSEEEEHHHH-----------------TC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh--eeEEEecccc-----------------CC
Confidence 57799999999999999999999985 222221111 133211 1111111100 11
Q ss_pred eecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 566 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 566 ar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
..-.|+-=..+.+.+.-....|+|+||..||+.+.++|++....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 223344445566666666667999999999999999999876653
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=86.08 E-value=0.022 Score=57.18 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=34.1
Q ss_pred CCCCCCHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHhCC
Q 002208 491 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGM 531 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi 531 (953)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 46789999999999999 999999999877666666666654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=83.96 E-value=0.8 Score=51.87 Aligned_cols=40 Identities=10% Similarity=0.136 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCC------------HHHHHHHHHHhCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIAKETGRRLGMG 532 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~------------~~tA~~ia~~lGi~ 532 (953)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22367778888874
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=81.18 E-value=1.7 Score=41.42 Aligned_cols=41 Identities=17% Similarity=0.022 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHhCCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMGT 533 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~~ 533 (953)
+-|++.++|++|+++|+++++.||.+ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45799999999999999999999997 556677777888753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 953 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-30 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-05 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-27 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 5e-14 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 7e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-09 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 5e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 7e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 4e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 7e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 5e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 7e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 7e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (286), Expect = 6e-30
Identities = 60/156 (38%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM-GTNMYPSAS 540
DPPR + +I+ + G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPAL 600
+ + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 601 KKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636
KKA+IGIA+ T A+ AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 116 bits (292), Expect = 5e-28
Identities = 50/327 (15%), Positives = 100/327 (30%), Gaps = 93/327 (28%)
Query: 21 IPIEEVFEQLKCTRE-GLSSTEGANRLQIFGPNKL-EEKKESKILKFLGFMWNPLSWVME 78
EE + GL+ + L+ +G N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 79 AAAVMAIAL---ANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPK 135
AA ++ L GE + + I+ +L+ N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 136 TKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN 195
T+ D P +L E GE L
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQL----- 145
Query: 196 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 255
++ +++ G V + + I
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I 183
Query: 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315
AV + V IP +P V++ +A+G+ R++++ AI
Sbjct: 184 AVALAV-------------------------AAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNK 342
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 45.8 bits (108), Expect = 2e-05
Identities = 45/288 (15%), Positives = 91/288 (31%), Gaps = 41/288 (14%)
Query: 605 IGIAVADATDA---------ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655
+ +AVA + A G + + + S RAI+ MK + Y +S
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 656 ITI-RIVFGFMFIALIWKFDFSPFMVLIIAILNDGTI-MTISKDRV-------KPSPLPD 706
+ +V F+ AL P +L + ++ DG + + P +
Sbjct: 245 SNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKE 304
Query: 707 SWKLKEIFATGVVLGGYLALMTVIFF-------------------WAMHETDFFPDKFGV 747
+F + +GGY+ TV M T+ P G+
Sbjct: 305 PLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGL 364
Query: 748 RAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGL--LLVTAFVIAQLVATLI 805
E M + + + S + S + P + + + + +
Sbjct: 365 DCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFL 424
Query: 806 AVYANWG--FARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSG 851
+Y + ++K + ++ S+ +++KF R L G
Sbjct: 425 ILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLEG 472
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 114 bits (285), Expect = 1e-27
Identities = 34/346 (9%), Positives = 83/346 (23%), Gaps = 37/346 (10%)
Query: 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV-----DKNLIEVFAKGVEKDHVML---- 364
+ + + + + + + + DK L ++ + G+ + ML
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 365 ---LAARASRTENQD--AIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSD 419
L + + + A + + + + + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 420 GHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGG 479
+ + A ++ LK + A+ + + + + K+
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 480 PWQFVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537
+ G + P + + G + + TG LG+
Sbjct: 202 TF-KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 538 SASLLGQD--------KDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 589
D A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 590 TGDGVNDAPALKKADI-GIAVA-------DATDAARGASDIVLTEP 627
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.4 bits (208), Expect = 8e-20
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL 541
D + + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAE---- 66
Query: 542 LGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601
V P K E VKKLQ K + GDG+NDAPAL
Sbjct: 67 --------------------------VLPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 602 KADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.1 bits (197), Expect = 1e-18
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 137 KLLRDGKWSEEE--AAILVPGDIISIKLGDIIPADARLLEGDP--LKVDQSALTGESLPV 192
K+ R + S + A +VPGDI+ + +GD +PAD R+L L+VDQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 193 TKNPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
K+ +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.9 bits (170), Expect = 5e-14
Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 27/148 (18%)
Query: 376 DAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKR--TALTYIDSDGHWHRASKGA 429
DA ++A++ + ++ R +V FN +K + D+ KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 430 PEQILALCN----------AKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERT------ 473
PE+IL C+ ++++ + G R L + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 474 -----KESPGGPWQFVGLLPLFDPPRHD 496
P FVGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.4 bits (140), Expect = 7e-10
Identities = 28/189 (14%), Positives = 67/189 (35%), Gaps = 23/189 (12%)
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVM 363
G + + + + + E+A + LC+D + + + + +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 364 LLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWH 423
L + + + + + A R +++ F+ K ++ +
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 424 R-----ASKGAPEQILALCNAK----------EDLKKKVHAIIDKY--AERGLRSLAVAR 466
KGAPE ++ CN +K+K+ ++I ++ LR LA+A
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 467 QEVPERTKE 475
++ P + +E
Sbjct: 207 RDTPPKREE 215
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 56.9 bits (136), Expect = 2e-09
Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 6/157 (3%)
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIA 551
R E + + +I+G + +Y + + D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY----- 129
Query: 552 ALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD 611
+ ++ + K ++ +L E M GD V D A K +D+ A
Sbjct: 130 -IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 612 ATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 48.5 bits (115), Expect = 5e-07
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628
++++K+ GD D PA AVADA + A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (115), Expect = 7e-07
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 13/151 (8%)
Query: 480 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 539
+ E + R V V +I+G +I + +L + +
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 540 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHI--CGMTGDGVNDA 597
L E + K +++K L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 598 PALKKADIGIAVA--DATDAARGASDIVLTE 626
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 46.5 bits (109), Expect = 5e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 629 LSVIISAV 636
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.8 bits (105), Expect = 1e-05
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 626
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 13/50 (26%), Positives = 17/50 (34%)
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636
+ GD ND P + A+ATD + SD V I
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 43.6 bits (101), Expect = 4e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 565 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVL 624
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 625 TEPGLSVIISAV 636
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 43.5 bits (101), Expect = 7e-05
Identities = 15/59 (25%), Positives = 22/59 (37%)
Query: 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628
++K + GD ND L AVA+ATD+A+ + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 40.7 bits (94), Expect = 5e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 572 HKYEIVKKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
K + + ++ I GDG ND L+ A IG+A+ A + + A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARGASDIV 623
GD +ND L+ A G+A+ +A + + +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARGASDIVLT---EPGLSVIISAVLTSRAIF 643
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 38.0 bits (87), Expect = 0.003
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623
+ + +++ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 953 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.82 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.56 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.2 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.14 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.02 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.0 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.92 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.89 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.86 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.79 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.78 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.73 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.66 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.65 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.49 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.38 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.19 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.13 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.55 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.45 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.45 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.4 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.37 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.35 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.84 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.8 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.53 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.41 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.28 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.13 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.01 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.98 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.58 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.35 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.97 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.86 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.83 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.47 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.34 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.64 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.01 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.97 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.96 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.97 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.87 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 90.46 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 89.92 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 88.56 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 88.47 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 87.11 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 83.61 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.6e-39 Score=376.39 Aligned_cols=231 Identities=20% Similarity=0.255 Sum_probs=181.1
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhc---CC
Q 002208 17 DLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALAN---GE 91 (953)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~---~~ 91 (953)
|+|..+.||+++.|+|| ++|||++||++|+++||+|++++++ .++|+.|+++|++|+.++++++++++++++. +.
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 78999999999999999 5799999999999999999998765 7788999999999999999999999999763 22
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEE
Q 002208 92 GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADAR 171 (953)
Q Consensus 92 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 171 (953)
....+|.++++|++++++|+.++++||+|++++++++++..++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 33458999999999999999999999999999999999876654 35788999987
Q ss_pred EEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCCcHHHHHHHHHHHH
Q 002208 172 LLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFC 251 (953)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~~lq~~~~~i~~~~ 251 (953)
+.+ +||+.+ .+.++|..+|..|.+|+++..+....
T Consensus 138 l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 172 (472)
T d1wpga4 138 LDE-----------FGEQLS------------------KVISLICVAVWLINIGHFNDPVHGGS---------------- 172 (472)
T ss_dssp HHH-----------HHHHHH------------------HHHHHHHHHHHHHCCTTSSSCCSSSC----------------
T ss_pred HHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHhhhh----------------
Confidence 643 122110 00111112222222222221111110
Q ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEe
Q 002208 252 ICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (953)
Q Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~ 331 (953)
....+.+.+..+++++++++|+|||++++++++.|++||+|+|++||+++++|++|+..+.|
T Consensus 173 ------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 173 ------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp ------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred ------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 11334566777888999999999999999999999999999999999999999988888888
Q ss_pred cCCC
Q 002208 332 SDKT 335 (953)
Q Consensus 332 ~DKT 335 (953)
+|||
T Consensus 235 ~~k~ 238 (472)
T d1wpga4 235 MKQF 238 (472)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 8876
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.4e-34 Score=283.56 Aligned_cols=148 Identities=40% Similarity=0.553 Sum_probs=134.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--CccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
||||+|++++|+.||++||+|||+|||++.||+++|+++||..+... ...+.+.+. ..++..+..+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-DDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHH-HHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccccccccccc-chhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999764321 112333333 356677888899999999999
Q ss_pred CHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHh
Q 002208 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~g 639 (953)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|+.++.+|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=9.8e-30 Score=242.84 Aligned_cols=124 Identities=35% Similarity=0.501 Sum_probs=109.0
Q ss_pred EEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhc
Q 002208 483 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 483 llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
..+.++++|++|+|++++|+.|+++||+++|+|||+..+|.++|++|||.
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------ 61 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------ 61 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh------------------------------
Confidence 34568899999999999999999999999999999999999999999984
Q ss_pred CcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 563 DGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.+|++++|++|..+|+.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 62 ~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 369999999999999999875 58999999999999999999999999999999999999999999999998873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=4.2e-30 Score=290.09 Aligned_cols=313 Identities=10% Similarity=-0.021 Sum_probs=209.5
Q ss_pred chhHHHhhcCceEEecCCCCCCCCCceEEEEeeee-----hhccCCChH-HHHHHHHHhc----cCcCCChHHHHHHHhc
Q 002208 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE-----VFAKGVEKD-HVMLLAARAS----RTENQDAIDAAIVGML 386 (953)
Q Consensus 317 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~-----~~~~~~~~~-~~l~~a~~~~----~~~~~~~~~~ai~~~~ 386 (953)
-+.+.|.||..+++|+|||||+|.|+|++.....+ ....+++.+ ++....+.+. ....+++...+++...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQD 108 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCS
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 35567999999999999999999999987432211 001223322 1221111111 1122345555555443
Q ss_pred CCh----hhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEE
Q 002208 387 ADP----KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSL 462 (953)
Q Consensus 387 ~~~----~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L 462 (953)
... ...+..+.....+||++.+|+|++.....++.+..+.+|+++.+ ...+.....+...+..++++|+|+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~a~~~~r~l 184 (380)
T d1qyia_ 109 EPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL----HVSDATLFSLKGALWTLAQEVYQEW 184 (380)
T ss_dssp SCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT----TCSCCGGGSTTCHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhc----CCcHHHHHHHHhHHHHHHHHHHHHH
Confidence 322 12345566677889999999998664433343344456666543 2222334456677889999999999
Q ss_pred EEEEeccCCCCCCCCCCCcEEEEEeecCCCCCC--CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcc
Q 002208 463 AVARQEVPERTKESPGGPWQFVGLLPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS 540 (953)
Q Consensus 463 ~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~--~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~ 540 (953)
++|++..++.+.+ ...++...|++..+|++|| +++++++.|+++||+++|+|||+..+|..+++++||.........
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i 263 (380)
T d1qyia_ 185 YLGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI 263 (380)
T ss_dssp HHHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE
T ss_pred HHhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE
Confidence 9998865432211 1223345688999999555 999999999999999999999999999999999999653222222
Q ss_pred ccCcccc--------cccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCC---eeEEe
Q 002208 541 LLGQDKD--------ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD---IGIAV 609 (953)
Q Consensus 541 l~~~~~~--------~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad---VGIam 609 (953)
+.+.+.. ......+-.+.+.....++|++|+||..+++.++..++.|+|||||+||+||+|+|| |||+|
T Consensus 264 ~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 264 ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (380)
T ss_dssp ECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEec
Confidence 2221100 000001111233344568999999999999999999999999999999999999999 99999
Q ss_pred c-CchHHHhh----ccCEeecCCCchhHHHHH
Q 002208 610 A-DATDAARG----ASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 610 g-~~t~~a~~----aaDivl~~~~~~~i~~ai 636 (953)
| .|++++++ .||+++ +++..+...+
T Consensus 344 G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 344 GLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp BTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 8 67766554 799999 5566665554
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=2e-25 Score=205.75 Aligned_cols=97 Identities=39% Similarity=0.602 Sum_probs=89.1
Q ss_pred eEEEEECCeE--EEEEccCcCCCcEEEEcCCCcccccEEEEe--cCCeEEeecCCCCCCeeEecCCC-------------
Q 002208 135 KTKLLRDGKW--SEEEAAILVPGDIISIKLGDIIPADARLLE--GDPLKVDQSALTGESLPVTKNPG------------- 197 (953)
Q Consensus 135 ~~~V~RdG~~--~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~--g~~l~Vdes~LTGEs~pv~K~~g------------- 197 (953)
.++|+|+|++ ++|++++|||||||.|++||+|||||+|++ +.++.||||+|||||.|+.|.++
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5899999985 789999999999999999999999999986 44589999999999999999753
Q ss_pred CcccccceeeeceEEEEEEEecchhHHHHHHHhh
Q 002208 198 DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (953)
Q Consensus 198 ~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~ 231 (953)
+.+|+||.|.+|+++++|++||.+|.+||+++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.82 E-value=7.3e-20 Score=189.07 Aligned_cols=122 Identities=22% Similarity=0.333 Sum_probs=99.9
Q ss_pred CChHHHHHHHhc----CChhhhhcCcceEEeecCCCCCceEEEEEEcC--CCcEEEEEeCcHHHHHHHhhc---------
Q 002208 375 QDAIDAAIVGML----ADPKEARAGIREVHFFPFNPVDKRTALTYIDS--DGHWHRASKGAPEQILALCNA--------- 439 (953)
Q Consensus 375 ~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~g~~~~~~KGa~e~il~~~~~--------- 439 (953)
+||+|.|++.++ .+....+..+++++.+||+|.+|||+++++.+ ++++++|+|||||.|+++|+.
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 589999998765 35566788899999999999999999999865 467889999999999999973
Q ss_pred -cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCC-----------CCCCCCCcEEEEEeecCCCCCCC
Q 002208 440 -KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERT-----------KESPGGPWQFVGLLPLFDPPRHD 496 (953)
Q Consensus 440 -~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~-----------~~~~e~~l~llG~i~i~D~lR~~ 496 (953)
+++.++.+.+.+++|+++|+||||+||++++.++ .+..+++|+|+|+++|+||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 5677889999999999999999999999987543 23457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.56 E-value=1e-15 Score=160.28 Aligned_cols=97 Identities=23% Similarity=0.379 Sum_probs=81.3
Q ss_pred hcCcceEEeecCCCCCceEEEEEEcCCC-----cEEEEEeCcHHHHHHHhhc----------cHHHHHHHHHHHHHH--H
Q 002208 393 RAGIREVHFFPFNPVDKRTALTYIDSDG-----HWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKY--A 455 (953)
Q Consensus 393 ~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~--a 455 (953)
+..+++++.+||||.||||+++++.+++ .+.+|+|||||.|+++|+. +++.++.+.+.++++ |
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4678899999999999999999987654 3679999999999999973 456677888888876 6
Q ss_pred HcCCeEEEEEEeccCCCCC----------CCCCCCcEEEEEeec
Q 002208 456 ERGLRSLAVARQEVPERTK----------ESPGGPWQFVGLLPL 489 (953)
Q Consensus 456 ~~GlR~L~vA~~~~~~~~~----------~~~e~~l~llG~i~i 489 (953)
++|+||||+|||+++..+. +.+|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999976532 235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.20 E-value=1.8e-11 Score=125.14 Aligned_cols=147 Identities=22% Similarity=0.242 Sum_probs=103.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC--ccc-c-------------------------C
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--ASL-L-------------------------G 543 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~--~~l-~-------------------------~ 543 (953)
.+.+.+.++|++|+++|++++++||+....+...++.+++....... ..+ . +
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46788999999999999999999999999999999999986431100 000 0 0
Q ss_pred cc----c----------ccccCchhHHHHHHhcC---------cEeecC--HHHHHHHHHHhcc----cCCEEEEEcCCc
Q 002208 544 QD----K----------DASIAALPVEELIEKAD---------GFAGVF--PEHKYEIVKKLQE----RKHICGMTGDGV 594 (953)
Q Consensus 544 ~~----~----------~~~~~~~~~~~~~~~~~---------vfar~~--P~~K~~iV~~lq~----~g~~V~~~GDG~ 594 (953)
.. . ......+.+.+++++.. .+..+. ...|...++.+.+ ..+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00 0 00111122334333221 112222 3456666666543 345699999999
Q ss_pred cCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 595 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 595 ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
||.|||+.|++||||+++++.+|++||+|+..++..++++++++
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999888765
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.14 E-value=1.1e-10 Score=119.66 Aligned_cols=148 Identities=20% Similarity=0.166 Sum_probs=104.0
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC--ccccCc--ccc-------------------
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--ASLLGQ--DKD------------------- 547 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~--~~l~~~--~~~------------------- 547 (953)
.++.+++.+++++|++.|++++++||++...+..++..+|+....... ..+... ...
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 456789999999999999999999999999999999999986532110 000000 000
Q ss_pred ----------------cccCchhHHHHHH---hc--Cc-----EeecCH--HHHHHHHHHhccc----CCEEEEEcCCcc
Q 002208 548 ----------------ASIAALPVEELIE---KA--DG-----FAGVFP--EHKYEIVKKLQER----KHICGMTGDGVN 595 (953)
Q Consensus 548 ----------------~~~~~~~~~~~~~---~~--~v-----far~~P--~~K~~iV~~lq~~----g~~V~~~GDG~N 595 (953)
.....+..+.+.. .. .+ +..+.| ..|...++.+.++ ...|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 0111112222111 11 11 223333 3687777766443 345889999999
Q ss_pred CHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 596 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 596 D~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
|.+|++.|++||||++|.+.+++.||+|+..++..+|..++++
T Consensus 179 D~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999988854
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.02 E-value=2.7e-10 Score=112.45 Aligned_cols=101 Identities=25% Similarity=0.274 Sum_probs=82.2
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHH--
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEI-- 576 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~i-- 576 (953)
.+|+.|+..|+.+.++||++...+...++++++.. ++... .+|...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~~--~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------ccccc--ccHHHHHH
Confidence 47999999999999999999999999999999852 12222 233333
Q ss_pred --HHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchh
Q 002208 577 --VKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 631 (953)
Q Consensus 577 --V~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~ 631 (953)
.+.++-....|+++|||.||.|||+.|++|+||++|.+.+|+.||+|+..++=.+
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 3334444578999999999999999999999999999999999999998876443
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=1.9e-10 Score=117.76 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=90.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc----cCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL----LGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+.....-...+ .|.... . .....-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-~------------~~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-F------------DETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-E------------CTTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-c------------eeeeee
Confidence 46899999999999999999999999999999999999996421100000 000000 0 000111
Q ss_pred cCHHHHHHHHHHhccc--CCEEEEEcCCccCHHhhhhCCeeEEec--CchHHHhhccCEeecC
Q 002208 568 VFPEHKYEIVKKLQER--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARGASDIVLTE 626 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~AdVGIamg--~~t~~a~~aaDivl~~ 626 (953)
..+..|.++++.++.+ -..|.|+|||.||.+|++.||+|||++ ......++.||+++.+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 3467899999999764 246899999999999999999999996 3456677789999854
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.97 E-value=1.5e-10 Score=118.46 Aligned_cols=150 Identities=14% Similarity=0.040 Sum_probs=108.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+....+......+....... .-......+++..|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 47899999999999999999999999999999999999886433221111111000000 000011245677899
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~ 647 (953)
.|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.+++..--...-++|+.|...+++-..+.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999986655555443223334689999888876665555443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.92 E-value=1.2e-09 Score=114.67 Aligned_cols=71 Identities=21% Similarity=0.217 Sum_probs=59.9
Q ss_pred ecCHH--HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 567 GVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 567 r~~P~--~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.++|. .|...++.+.+. ...++++|||.||.+||+.|+.|+||++|.+.+|+.||+|...++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34454 588888877653 345899999999999999999999999999999999999998877788888774
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=1e-09 Score=116.08 Aligned_cols=70 Identities=20% Similarity=0.275 Sum_probs=59.9
Q ss_pred cCHH--HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 568 VFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 568 ~~P~--~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
++|. .|..-++.+.+. ...|+++|||.||.+||+.|+.||||++|++.+++.||++...++-.++.++++
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4454 688777777653 346999999999999999999999999999999999999998888888888874
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=6.8e-10 Score=116.68 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=61.2
Q ss_pred eecCHH--HHHHHHHHhccc-C---CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 566 AGVFPE--HKYEIVKKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 566 ar~~P~--~K~~iV~~lq~~-g---~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
-.++|. .|..-++.|.++ | ..|.++|||.||.|||+.|+.||||++|.+.+|+.||+|+.+++-.++..+++
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 355665 498888877654 2 45899999999999999999999999999999999999998888888887774
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.79 E-value=1.7e-09 Score=108.26 Aligned_cols=136 Identities=22% Similarity=0.195 Sum_probs=95.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.+++.+.++.++..|..+.++||.....+....++.+....... .+............ .....+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKLTGDVE-------GEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEEEEEE-------CSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccccccccccc-------cccccccccc
Confidence 47889999999999999999999999999999999999887532110 00000000000000 0000111123
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
.-...+.+.++...+.|.++|||.||.||++.|++|||| ++.+..++.||+|+..+++..|+.+|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 333445555555566799999999999999999999999 88999999999999988898887654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.78 E-value=9.3e-09 Score=102.40 Aligned_cols=130 Identities=16% Similarity=0.163 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.++....++.+ +.+.++..+|+.............++............... ........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC---------------EEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc---------------cccccccchh
Confidence 4556777777665 57899999999999999999999987532111000000000 1123344566
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
.+...++.++...+.|+|+|||.||.|||+.|++||||+...++.++++|++.. .++..++.++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 677788888888999999999999999999999999997667777788888875 567777776643
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.73 E-value=3.5e-09 Score=110.81 Aligned_cols=73 Identities=26% Similarity=0.285 Sum_probs=60.9
Q ss_pred eecCHH--HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHH
Q 002208 566 AGVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 566 ar~~P~--~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
..+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.||||++|++.+|+.||+|..+++-.++.+++++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344454 587777777543 3568899999999999999999999999999999999999888888899888854
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.66 E-value=7.2e-09 Score=108.99 Aligned_cols=65 Identities=26% Similarity=0.308 Sum_probs=51.0
Q ss_pred HHHHHHHHhcc----cCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCc-hhHHHHH
Q 002208 572 HKYEIVKKLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGL-SVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~----~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~-~~i~~ai 636 (953)
.|..-++.+.+ ....|+++|||.||.+||+.||+|+||++|.+.+|+.||+|+..++- ..+..++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 35555544433 34579999999999999999999999999999999999999976543 3455555
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.65 E-value=4e-08 Score=102.88 Aligned_cols=71 Identities=27% Similarity=0.310 Sum_probs=59.6
Q ss_pred ecCHH--HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 567 GVFPE--HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 567 r~~P~--~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.++|. .|..-++.+.+. ...|+++|||.||.|||+.|++||||++|++.+|+.||+|+.+++-.+++.+|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45554 587777766543 234888999999999999999999999999999999999999888888888874
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.49 E-value=2.1e-07 Score=95.08 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=39.5
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
.+...+.+.++|++|+++|+++++.||++...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34455789999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.38 E-value=2.6e-07 Score=95.00 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhccc-C---CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC-------EeecCCCchhHHHHHHH
Q 002208 570 PEHKYEIVKKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD-------IVLTEPGLSVIISAVLT 638 (953)
Q Consensus 570 P~~K~~iV~~lq~~-g---~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD-------ivl~~~~~~~i~~ai~~ 638 (953)
...|...++.+.+. | ..|.++|||.||.|||+.|+.|++|+++.+.+++.|| ++-..++..+|.+++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 34688888887665 2 3488999999999999999999999999999999998 45555566677777754
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=2.6e-06 Score=85.74 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=38.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
.+.+.+.++|++|+++|+.++++||++...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 36688999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=5.5e-06 Score=77.26 Aligned_cols=122 Identities=20% Similarity=0.294 Sum_probs=90.9
Q ss_pred ccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhh---hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcH
Q 002208 354 AKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKE---ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAP 430 (953)
Q Consensus 354 ~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~---~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 430 (953)
..|+++++++.+|+.++..++ ||+..||+.++..... ...........||....+...+.+ +| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEEE---CC--EEEEecHH
Confidence 468999999999999887665 9999999998753211 112344455677777766554432 56 46778999
Q ss_pred HHHHHHhhcc-HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCC
Q 002208 431 EQILALCNAK-EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPR 494 (953)
Q Consensus 431 e~il~~~~~~-~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR 494 (953)
..+.+.+... ..+...+.+.+++++.+|..++.+|... +++|++++.|+++
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 8887655421 2345677888999999999999999866 8999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.55 E-value=7.1e-05 Score=75.15 Aligned_cols=123 Identities=13% Similarity=0.168 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee-cC
Q 002208 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG-VF 569 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~~ 569 (953)
++-||+.+++++|++.| +++.++||.....+..+-++.|+.... ...+.+.+. ..+ -.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~------------------~~~k~~ 150 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF--PFGAFADDA------------------LDRNEL 150 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC--SCEECTTTC------------------SSGGGH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc--ccccccccc------------------ccccch
Confidence 34689999999999987 899999999999999999999996431 111111100 111 11
Q ss_pred HHHHHHHHHHhcc---cCCEEEEEcCCccCHHhhhhCCee---EEecCc--hHHHhhccCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQE---RKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~---~g~~V~~~GDG~ND~paLk~AdVG---Iamg~~--t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
|+.-...++.+.. ..+.++|+||+.+|..|-+.|++- |+-|.. .+..+..+|+++ ++++.+...+
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l 223 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVL 223 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHH
Confidence 2222333444422 245799999999999999999954 444432 233444689998 5677777665
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.45 E-value=6e-05 Score=75.01 Aligned_cols=124 Identities=17% Similarity=0.129 Sum_probs=87.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|+++++++.|++.|+++.++||.....+..+.+++|+.... ...+...+. ....-.|
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~kp~p 154 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSL-----------------PEIKPHP 154 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTS-----------------SSCTTSS
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc--ccccccccc-----------------ccccccc
Confidence 346799999999999999999999999999999999999986421 111111110 0112234
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC----chHHHhhccCEeecCCCchhHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~----~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
+--..+.+.++-....++|+||..+|..+-+.|++ .|.+.. ..+.....+|+++ ++++.++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~i 222 (224)
T d2hsza1 155 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKI 222 (224)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGG
T ss_pred hhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHh
Confidence 54556667777777789999999999999999997 455532 2234455689887 456666544
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.45 E-value=0.00037 Score=72.79 Aligned_cols=132 Identities=10% Similarity=0.052 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC---CCCc-cccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM---YPSA-SLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~---~~~~-~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
++|+|+++.++.|++.|+.+.++||--......+.+++|+..+. +.+. ...++.......+. .
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~----------~--- 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE----------L--- 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSS----------C---
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCC----------c---
Confidence 58999999999999999999999999999999999999986431 1110 00000000000000 0
Q ss_pred cCHHHHHHHH----H--HhcccCCEEEEEcCCccCHHhhhh---CCeeEEec--Cch-----HHHhhccCEeecCCCchh
Q 002208 568 VFPEHKYEIV----K--KLQERKHICGMTGDGVNDAPALKK---ADIGIAVA--DAT-----DAARGASDIVLTEPGLSV 631 (953)
Q Consensus 568 ~~P~~K~~iV----~--~lq~~g~~V~~~GDG~ND~paLk~---AdVGIamg--~~t-----~~a~~aaDivl~~~~~~~ 631 (953)
.....|...+ . ........|.++|||+||.+|.+. ++.++++| +.. +.=+++-|||+.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0111222111 1 122334578999999999999874 45555554 221 233467899998876555
Q ss_pred HHHHH
Q 002208 632 IISAV 636 (953)
Q Consensus 632 i~~ai 636 (953)
++..+
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.40 E-value=0.00027 Score=72.17 Aligned_cols=102 Identities=17% Similarity=0.157 Sum_probs=74.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.||+.++++.|++.|+++.++||.+......+-+++|+.... ....+.+.+. ....-.|
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~-----------------~~~KP~p 159 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYP 159 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSS
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-cccccccccc-----------------cccccCh
Confidence 357899999999999999999999999999999999999986422 1112211110 1222345
Q ss_pred HHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCee-EEec
Q 002208 571 EHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIG-IAVA 610 (953)
Q Consensus 571 ~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVG-Iamg 610 (953)
+.=....+.+.-. .+.|+|+||..+|+.+=+.|++- |++.
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~ 201 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI 201 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc
Confidence 5556666777653 46799999999999999999973 4553
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.37 E-value=6.7e-05 Score=74.74 Aligned_cols=57 Identities=11% Similarity=0.215 Sum_probs=43.0
Q ss_pred ecCHH--HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecC
Q 002208 567 GVFPE--HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 626 (953)
Q Consensus 567 r~~P~--~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~ 626 (953)
.+.|. .|..-++.|.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++++.+
T Consensus 152 di~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 44443 69999999987754 668899999999999997777765332 25688998854
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.35 E-value=0.00017 Score=71.50 Aligned_cols=116 Identities=17% Similarity=0.179 Sum_probs=82.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+. ..+.-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~~~~-----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc--ccccccccc-----------------ccchhhHH
Confidence 45699999999999999999999999999999999999995321 122222111 12233344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE-EecC--c-hHHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--A-TDAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI-amg~--~-t~~a~~aaDivl~~ 626 (953)
-=..+++.+.-..+.++|+||+.+|..|-+.|++.. ++.. . .+.-...||+++.+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 455667777766778999999999999999999744 3322 2 22233467888744
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.84 E-value=0.00039 Score=68.35 Aligned_cols=119 Identities=10% Similarity=0.014 Sum_probs=84.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+.++.++..| ++.++|+.....+..+.+++|+.... ..++.+. -.....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~-------------------~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS-------------------PEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC-------------------SSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--ccccccc-------------------cccccccc
Confidence 56799999999998775 89999999999999999999986431 1111111 01234466
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEe--cC--chHHHhhccCEeecCCCchhHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAV--AD--ATDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIam--g~--~t~~a~~aaDivl~~~~~~~i~~ 634 (953)
....+.+.++-....++|+||+.||..|-++|++ .|++ |. ..+.....+|+++ +++..++.
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~ 207 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLA 207 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHH
Confidence 5666677776666789999999999999999998 5555 32 2233344589997 44666554
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00023 Score=71.03 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=45.0
Q ss_pred HHHHHHHHhcc-cCCEEEEEcC----CccCHHhhhhCC-eeEEecCchHHHhhccCEee
Q 002208 572 HKYEIVKKLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDIVL 624 (953)
Q Consensus 572 ~K~~iV~~lq~-~g~~V~~~GD----G~ND~paLk~Ad-VGIamg~~t~~a~~aaDivl 624 (953)
.|..-++.|.+ ....|.++|| |.||.+||+.|+ .|+||+++.|.+|..+|++|
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 46666777754 3567999999 569999999997 69999999999999999886
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.53 E-value=0.0034 Score=62.41 Aligned_cols=124 Identities=17% Similarity=0.146 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+|.||+.++++.|+ .|+++.++|+........+.+.+|+.... ..++...+. ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc--ccccccccc-----------------cccchhhH
Confidence 56899999999997 58999999999999999999999985321 111110000 01222233
Q ss_pred HHHHHHHHhcccCCEEEEEcCC-ccCHHhhhhCCeeEE-e--cCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDG-VNDAPALKKADIGIA-V--ADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG-~ND~paLk~AdVGIa-m--g~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
-=..+.+.+.-....++|+||. .||..+-++|++-.. + +.........+|+++ ++++.++..++
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 3344556665555679999997 699999999988533 2 223334455789988 45778877764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.0064 Score=58.49 Aligned_cols=134 Identities=18% Similarity=0.148 Sum_probs=79.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHH---------------HHHHHHHhCCCCCCCCCccccCcccccccCchhHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------AKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEE 557 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~t---------------A~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~ 557 (953)
+-|++.++++.|+++|+++.++|...... ........|+.... ..+.....+.. ..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~~~-----~~- 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQGS-----VE- 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTTCS-----SG-
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeecccccccc-----cc-
Confidence 44899999999999999999999875310 11111222221100 00000000000 00
Q ss_pred HHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee--EEecCc---hHHHhhccCEeecCCCchhH
Q 002208 558 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG--IAVADA---TDAARGASDIVLTEPGLSVI 632 (953)
Q Consensus 558 ~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG--Iamg~~---t~~a~~aaDivl~~~~~~~i 632 (953)
.......+..-.|.-=..+.+.+.-..+.+.||||..+|..|=+.|+++ +.+..| .+.....||+|+ +++..+
T Consensus 99 ~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 99 EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 0000011223445555677777776666799999999999999999995 444322 355666799998 668888
Q ss_pred HHHHH
Q 002208 633 ISAVL 637 (953)
Q Consensus 633 ~~ai~ 637 (953)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 87764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.28 E-value=0.00085 Score=65.86 Aligned_cols=120 Identities=11% Similarity=0.077 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|++ ++++.++|+-....+..+.++.|+.... ..++.+.+. ....-.|+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccc--ccccccccc-----------------ccchhhhh
Confidence 366899999999975 7999999999999999999999885421 111111100 01222355
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe---cCchHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam---g~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
--..+++.++-....|.|+||..+|..+-++|++.... |..+....+.+|+++ +++..++
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 55666676765556799999999999999999988664 333444455788887 3455543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.13 E-value=0.0017 Score=63.40 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=71.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+... .+..+-++.|+.... .. +.+.+.. ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~-i~~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TE-ILTSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EE-EECGGGC----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--cc-ccccccc----------------cccchhHH
Confidence 4679999999999999999999998654 456778889986421 11 1111100 12223455
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCc
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 612 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~ 612 (953)
--..+++.+.-....|+|+||+.+|..+-++|++. |++..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 55666777776667899999999999999999985 345444
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.01 E-value=0.0065 Score=57.28 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=65.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.++++.|++.|+++.++|+- ....+...-+..++..... ... ....-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--~~~----------------------~~~kp~~ 101 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--QRE----------------------IYPGSKV 101 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--EEE----------------------ESSSCHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--eee----------------------cccCCCh
Confidence 57899999999999999999999964 4566676667777642110 000 0111224
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 605 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV 605 (953)
+.-..+.+.+.-..+.++|+||..+|..+-++|++
T Consensus 102 ~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 102 THFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred HHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 45556677777677789999999999999999987
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.0077 Score=59.67 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=79.0
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-.+.||+.+++++|++.|+++.++|+..........+.+|+..-. +........ .....-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~-----------------~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-----------------KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-----------------GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc-----------------ccccCCCc
Confidence 457899999999999999999999999999999999988875321 100000000 01122334
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe----cCc-hHHHhhccCEeec
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADA-TDAARGASDIVLT 625 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam----g~~-t~~a~~aaDivl~ 625 (953)
+-=....+.+.-....|+|+||..+|+.+-++|++-... |+. ...-...++.++.
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 444556666666667899999999999999999985444 222 2223345566663
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.58 E-value=0.013 Score=56.13 Aligned_cols=109 Identities=14% Similarity=0.041 Sum_probs=70.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+++.++.|++.|+++.++|+-+..+. ++-+.+|+.... ...+.+.+.. ...-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc--cccccccccc-----------------ccCCCHH
Confidence 4679999999999999999999999776554 567788875321 1111111100 1111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI 622 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi 622 (953)
--..+.+.+.- ..+.|+||..+|..+-++|++=...=++..-.++.-||
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33444555543 34899999999999999998875443555556666553
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.35 E-value=0.018 Score=57.37 Aligned_cols=124 Identities=12% Similarity=0.112 Sum_probs=81.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|++ |+++.++|+.+.......-+++|+.... ..++.+.+. ..+.-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-----------------~~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc--ccccccccc-----------------ccchhhhh
Confidence 367999999999985 8999999999999999999999986421 112211110 01222233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCee-EEec--Cc--hHHHhhccCEeecCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVG-Iamg--~~--t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
-=..+.+.+.-....++|+||.. +|+.+-+.|++. +..- .+ .......+|+++. ++..+..+++
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHH
Confidence 22345555555556699999996 899999999996 5432 21 2223335788884 5777776664
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.97 E-value=0.0057 Score=56.35 Aligned_cols=95 Identities=13% Similarity=0.005 Sum_probs=60.9
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH----HHHHHH------H-hCCCCCCCCCccccCcccccccCchhHHHH
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI----AKETGR------R-LGMGTNMYPSASLLGQDKDASIAALPVEEL 558 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t----A~~ia~------~-lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~ 558 (953)
+|+|.|++.+.++.|+++|+++.++||.+... ...+.. . .+... ..+...
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~-------------- 94 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQR-------------- 94 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEEC--------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeecc--------------
Confidence 58899999999999999999999999986321 111111 0 00000 000000
Q ss_pred HHhcCcEeecCHHHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCee
Q 002208 559 IEKADGFAGVFPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 559 ~~~~~vfar~~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVG 606 (953)
..--.|-.+..|..+.+.+... ..+++|+||-..|+.|.+++++=
T Consensus 95 ---~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 95 ---EQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ---CTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ---cccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 0001122356788888777665 45678899999999999998874
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.86 E-value=0.034 Score=48.92 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=68.5
Q ss_pred CCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHH
Q 002208 356 GVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILA 435 (953)
Q Consensus 356 ~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~ 435 (953)
+.++++++.+++..+...+ ||+..|++.++.+..-........+..|-.. + .|+ .+.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEG------V-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTTE------E-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccce------E-----EeE--EEEECcHHHHHh
Confidence 3578899998887766555 9999999998864322111222222222111 0 011 145699998765
Q ss_pred HhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeec
Q 002208 436 LCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPL 489 (953)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i 489 (953)
.. -++++.+++.++.+..+|..++.++... .++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cC---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 32 1244567788899999999999999876 89999886
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.83 E-value=0.018 Score=56.60 Aligned_cols=138 Identities=15% Similarity=0.195 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccc-ccc------------------Cch
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD-ASI------------------AAL 553 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~-~~~------------------~~~ 553 (953)
+-||+.++++.+++. ....++|--...-..++|+.+|+..+.+... .+.+ ..+ +.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~----~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTE----VDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEB----CCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeeccc----ccccccCCChHHHHHHHHHhhhccCccHH
Confidence 348999999999877 6777777778888999999999963321110 1111 011 111
Q ss_pred hH-------------HHHHHhcCcEeecCHHHHHHHHHHhccc-C-CEEEEEcCCccCHHhhhhCCe--eEEec-CchHH
Q 002208 554 PV-------------EELIEKADGFAGVFPEHKYEIVKKLQER-K-HICGMTGDGVNDAPALKKADI--GIAVA-DATDA 615 (953)
Q Consensus 554 ~~-------------~~~~~~~~vfar~~P~~K~~iV~~lq~~-g-~~V~~~GDG~ND~paLk~AdV--GIamg-~~t~~ 615 (953)
++ .++++++... --..|..+++..-.. + ..-+.+||.+.|..||+.|.= |+|++ ||.+-
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc
Confidence 11 1122222222 124566665543321 1 224889999999999998865 99998 99999
Q ss_pred HhhccCEeecCCCchhHHHHHHH
Q 002208 616 ARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 616 a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
|...||+++.+++...+...+..
T Consensus 234 al~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHH
T ss_pred cccccceEEeccchhHHHHHHHH
Confidence 99999999999988776666643
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.47 E-value=0.014 Score=57.03 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=63.9
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCC----HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
|-|++.+.++.+++.|++|..|||.. ..|+++.-+.+|+.........+.+.+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------- 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------- 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC----------------------
Confidence 45799999999999999999999975 3577888888998643222222221110
Q ss_pred CHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEe
Q 002208 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAV 609 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIam 609 (953)
..+.|.+.|+. -.+++++||..+|..+-++|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11235555553 3589999999999999999984 5554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.34 E-value=0.023 Score=55.42 Aligned_cols=112 Identities=8% Similarity=0.014 Sum_probs=73.5
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+.... ...+.+.+. ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc--ccccccccc-----------------cccccCh
Confidence 45778999999999999999999999765 46777888885421 111111110 1222233
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCchHHHhhccCEeec
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLT 625 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~t~~a~~aaDivl~ 625 (953)
+-=....+.++-..+.|+|+||..+|+.+-+.|++ .|+++.+. ....++.++.
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~ 202 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEES
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh--hcccccEEcC
Confidence 33344555565556679999999999999999987 55555433 2334666553
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.64 E-value=0.12 Score=51.73 Aligned_cols=61 Identities=30% Similarity=0.318 Sum_probs=42.3
Q ss_pred HHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCe-eEEecCc--h-HHHhh---ccCEeecCCCchhHHHHH
Q 002208 574 YEIVKKLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA--T-DAARG---ASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdV-GIamg~~--t-~~a~~---aaDivl~~~~~~~i~~ai 636 (953)
....+.+.-..+.++||||.. ||+.+-++|++ +|.+..| + +.... ..|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 555666655667899999996 69999999997 6666422 2 22222 248888 5677777765
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.01 E-value=0.038 Score=55.46 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
|++.++|++|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999987766666665554
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.97 E-value=0.06 Score=52.08 Aligned_cols=122 Identities=8% Similarity=0.065 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
.+.+++.++++.+++.|+++.++|+-........-+..|+.... ..++...+. ....-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~-----------------~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeee-----------------eccccHHH
Confidence 45689999999999999999999999999999988888875321 111111110 12223344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ec---CchHHHhhccCEeecCCCchhHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VA---DATDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg---~~t~~a~~aaDivl~~~~~~~i~~ 634 (953)
-=..+.+.+.-....|+|+||..+|+-+-++|++--. +. ...+-....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 4445666666566679999999999999999997744 32 22222334578887 45666543
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.96 E-value=0.092 Score=50.88 Aligned_cols=124 Identities=9% Similarity=0.058 Sum_probs=78.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
.+.|++.+.+++|+ .+..++|+-....+..+-+++|+...... ....+.... ...+.-.|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~---------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLG---------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHC---------------TTCCTTSSH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccce-eeccccccc---------------ccccccCHH
Confidence 46788888887765 45679999999999999999999643211 111100000 001122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCch--------HHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t--------~~a~~aaDivl~~~~~~~i~~ai 636 (953)
.=....+.+.-..+.++|+||..+|+.+=+.|++- |++..+. +....-+|+++ +++..+..++
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll 217 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 217 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 33455666666667899999999999999999973 5554332 11223489998 4466665554
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.97 E-value=0.059 Score=52.19 Aligned_cols=108 Identities=9% Similarity=0.031 Sum_probs=70.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.++|++.+.+++|+++|+++.++|+- ............|+.... ...+.+.+ .....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f--d~i~~s~~-----------------~~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF--DFLIESCQ-----------------VGMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC--SEEEEHHH-----------------HSCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh--ceeeehhh-----------------ccCCC
Confidence 46789999999999999999999962 333444455555553210 00110000 01223
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCchHHHhh
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARG 618 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~t~~a~~ 618 (953)
-.|+--...++.++-....+.|+||..+|+.+-++|++ +|.+.++.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 34666667777777777789999999999999999997 6666555554443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.87 E-value=0.16 Score=49.48 Aligned_cols=109 Identities=19% Similarity=0.139 Sum_probs=59.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCC--------HH----HH---HHHHHHhCCCCCCCCCccccCcccccccCchhHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQ--------LA----IA---KETGRRLGMGTNMYPSASLLGQDKDASIAALPVEE 557 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~--------~~----tA---~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~ 557 (953)
+-|++.+++++|+++|+++.++|.-. .. .. .+.-++.|+................ ....
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~----- 122 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVG-PLAI----- 122 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCS-TTCC-----
T ss_pred ecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccc-cccc-----
Confidence 56999999999999999999999521 11 11 1112223332110000000000000 0000
Q ss_pred HHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEec
Q 002208 558 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVA 610 (953)
Q Consensus 558 ~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg 610 (953)
....+..-.|.-=.+..+.+.-....+.||||..+|..|=+.|++ +|.+.
T Consensus 123 ---~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 123 ---PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp ---SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred ---cccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 000011223444455566666555678999999999999999998 56664
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.46 E-value=0.037 Score=54.23 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=30.6
Q ss_pred HHHHHHHhcc-cCCEEEEEcC----CccCHHhhhhCC-eeEEecCchHHHh
Q 002208 573 KYEIVKKLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAAR 617 (953)
Q Consensus 573 K~~iV~~lq~-~g~~V~~~GD----G~ND~paLk~Ad-VGIamg~~t~~a~ 617 (953)
|..-++.|.. ....|+++|| |.||.+||+.|+ .|+++++..+..+
T Consensus 186 Kg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~ 236 (243)
T d2amya1 186 KRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR 236 (243)
T ss_dssp GGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH
T ss_pred HHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH
Confidence 4444444432 3567999999 889999999997 6888877655433
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=89.92 E-value=0.53 Score=45.68 Aligned_cols=95 Identities=11% Similarity=0.059 Sum_probs=65.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++-+++.+++++|+ |+.+.++|..+...+...-+..|+.... ..++.+.+. ..+.-.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~-----------------~~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--ccccccccc-----------------cccCccH
Confidence 456789999999886 7888999999999888888888875321 112211111 1122233
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
+-=..+++.+.-..+.|+|+||..+|+.+=++|++-
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 333455666665556799999999999999999863
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.56 E-value=0.12 Score=49.40 Aligned_cols=104 Identities=10% Similarity=-0.015 Sum_probs=63.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHH----HHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIA----KETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA----~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
++.|++.+.++.|++.|+++.++|+...... .......++... -..++.+.+ .....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~--fd~i~~s~~-----------------~~~~K 159 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIESCQ-----------------VGMVK 159 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEEHHH-----------------HTCCT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh--ccEEEeccc-----------------cccch
Confidence 3578999999999999999999997543222 222222232110 001111000 00112
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCchH
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATD 614 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~t~ 614 (953)
-.|+-=..+++.+.-....++|+||...|+.+-++|++ +|.+.++.+
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred hHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 23343345666666555678899999999999999999 666655443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=88.47 E-value=0.27 Score=48.76 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=31.2
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (953)
.+.+=|++.++|+.|+++|++++.+|+.. +....+.-+++|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444789999999999999999999544 44444444567764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=87.11 E-value=0.52 Score=46.65 Aligned_cols=43 Identities=26% Similarity=0.210 Sum_probs=34.3
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCcc-CHHhhhhCCe-eEEec
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVN-DAPALKKADI-GIAVA 610 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~N-D~paLk~AdV-GIamg 610 (953)
-+|+--..+.+.++-..+.|+||||..+ |..+-++|++ +|.+.
T Consensus 181 P~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 181 PEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp TSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred CCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 3455556777777766778999999976 9999999999 77774
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=83.61 E-value=0.12 Score=48.22 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=23.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD 517 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD 517 (953)
.+-|++.++++.|++.|+++.++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 35689999999999999999999974
|