Citrus Sinensis ID: 002230
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 950 | 2.2.26 [Sep-21-2011] | |||||||
| Q37145 | 1020 | Calcium-transporting ATPa | yes | no | 0.988 | 0.920 | 0.829 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.994 | 0.931 | 0.795 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | yes | no | 0.988 | 0.920 | 0.794 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.994 | 0.931 | 0.784 | 0.0 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.930 | 0.855 | 0.726 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.975 | 0.904 | 0.638 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.977 | 0.901 | 0.639 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.984 | 0.899 | 0.638 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.961 | 0.897 | 0.627 | 0.0 | |
| Q8RUN1 | 1043 | Calcium-transporting ATPa | no | no | 0.971 | 0.884 | 0.621 | 0.0 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1593 bits (4125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/939 (82%), Positives = 850/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQV
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1540 bits (3988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/950 (79%), Positives = 849/950 (89%), Gaps = 5/950 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+FAIAVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNFSSACLTG
Sbjct: 777 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTG 836
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++Y
Sbjct: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVY 896
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949
QF++IW LQ +GKA+F LDGPD L+LNTLIFN FVFCQV R E
Sbjct: 897 QFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREME 946
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/939 (79%), Positives = 831/939 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL ENF VKAKN+SEEAL+RWRKLCG VKN KRRFRFTANL KR EA+AI+ +N E
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFI GL+L SEY VPEEV A+GFQIC DELGSIVEGHD KKL HGG
Sbjct: 61 KLRVAVLVSKAALQFIQGLSLRSEYVVPEEVKAAGFQICADELGSIVEGHDSKKLITHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V GIA+KL+TS DG+ST+E + RR+++YG+NKFTES R FWV+VWEAL D TL+ILA
Sbjct: 121 VTGIADKLATSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFVWEALQDTTLIILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSLVVGIA EGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD+EKKKI V
Sbjct: 181 VCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIQV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+++SIYDLLPGD+VHL +GDQVPADGLF+SGFS+LINESSLTGESEPV VN
Sbjct: 241 QVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLINESSLTGESEPVVVNE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKML+TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 DNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TF V+ QGL ++K EG +WSGDDALE+LE FAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGNIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+N K S +P + K LL+SIFNNTGGEVVI + K +ILGTPTETA+LEF L LG
Sbjct: 481 NNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDGKYQILGTPTETALLEFALSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
G+F+A+R +KIVK+EPFNS KK+M VV++LP GG R HCKGASEI+LAACDKF++ G
Sbjct: 541 GNFKAKRDETKIVKMEPFNSTKKRMCVVLKLPGGGCRAHCKGASEIVLAACDKFMDETGA 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL++ + LN IE FA+EALRTLCL E+ FS + IP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFSVEEQIPLQGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVA CRSAGI VRMVTGDNINTAKAIARECGILT++G+AIEGPEFREKS +EL
Sbjct: 661 VRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGILTEDGLAIEGPEFREKSLDEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 LKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNFSSAC TGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN DLMKR PVGR G FI+NVMWRNILGQS YQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNILGQSFYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
F+++WYLQT+GK++F LDGPD +++LNT+IFN+FVFCQV
Sbjct: 901 FIVMWYLQTQGKSMFGLDGPDAEVVLNTIIFNSFVFCQV 939
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1506 bits (3898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/951 (78%), Positives = 838/951 (88%), Gaps = 6/951 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+FAIAVTIVVVAVPEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V + + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 V--ASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
GTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT
Sbjct: 777 GTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 836
Query: 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSL 898
G+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++
Sbjct: 837 GSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAV 896
Query: 899 YQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949
YQF+IIW LQ +GK++F L G D L+LNTLIFN FVFCQV R E
Sbjct: 897 YQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREME 947
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1305 bits (3378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/885 (72%), Positives = 749/885 (84%), Gaps = 1/885 (0%)
Query: 55 RRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKK 114
R S+ EK +VA L S+A L+F HG++L S Y VPE+V A+GFQI DEL SIVE D KK
Sbjct: 60 RASHHEKLQVAALPSKATLEFEHGVSLRSAYIVPEDVQAAGFQIDADELASIVESRDTKK 119
Query: 115 LKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDM 174
L VHG + GIA+KL TS+T+GI T + LLN+R++IYG+NKF E+ R FW +VWEAL D
Sbjct: 120 LTVHGQLNGIADKLGTSLTNGIVTDKDLLNQRQDIYGVNKFAETEIRSFWEFVWEALEDT 179
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 234
TL+IL+ CA+ SLVVGI TEGWP+GAHDG+GIV SILLVV VT TS+Y+QSLQF+DLD+E
Sbjct: 180 TLIILSACAIFSLVVGITTEGWPQGAHDGVGIVASILLVVSVTGTSNYQQSLQFRDLDKE 239
Query: 235 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294
K+KI VQV RNG R+++ I DLLPGD VHL +GDQVPADGLF+SGFSVL++ESSLTGESE
Sbjct: 240 KRKILVQVTRNGLRQRVLIDDLLPGDAVHLAVGDQVPADGLFISGFSVLVDESSLTGESE 299
Query: 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
PV VN NP+LLSGTKV +GSCKMLVT VGMRTQWGKLMA L++GGDDETPLQ +LNGVA
Sbjct: 300 PVFVNEDNPYLLSGTKVLDGSCKMLVTAVGMRTQWGKLMAVLTDGGDDETPLQTRLNGVA 359
Query: 355 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 414
IGKIGLFFAV+TF V+ QG+ +K +G +WSGDD LEIL+ FA+AVTIVVVAVPE
Sbjct: 360 NTIGKIGLFFAVLTFIVLSQGIIGQKYLDGLLLSWSGDDVLEILDHFAVAVTIVVVAVPE 419
Query: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 474
GLPLAVTLSLAFAMKKMMNDKALVR LAACETMGSAT ICSDKTGTLTTN MTV+KACIC
Sbjct: 420 GLPLAVTLSLAFAMKKMMNDKALVRQLAACETMGSATVICSDKTGTLTTNRMTVVKACIC 479
Query: 475 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534
+V+N + TP S+ P A + LL+SIFNNT GEVV + K +ILGTPTETA+LE
Sbjct: 480 GNTIQVNNPQ-TPNMSSNFPEVAVETLLESIFNNTSGEVVTNQDGKYQILGTPTETALLE 538
Query: 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 594
F LLL GD + ++ SKIVKVEPFNS KK+M ++ELP GG+R HCKGASEI+LAACDKF
Sbjct: 539 FALLLDGDCKEKQLGSKIVKVEPFNSTKKRMSTILELPGGGYRAHCKGASEIVLAACDKF 598
Query: 595 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 654
++ G +VPL++ + LN+ I+ F+SEALRTLCLA E+ FS IP +GYTCIGI
Sbjct: 599 IDERGCIVPLDDKTSSKLNDIIKAFSSEALRTLCLAYREMEEGFSTQEQIPLQGYTCIGI 658
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 714
VGIKDP+RPGV++SVA CRSAGI+VRM+TGDNI+TAKAIARECGILT +GIAIEG EFRE
Sbjct: 659 VGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTKDGIAIEGAEFRE 718
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
KS EEL LIPK+QV+ARSSP+DKHTLVKHLRT EVVAVTGDGTNDAPAL EADIGLA
Sbjct: 719 KSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLA 778
Query: 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834
MGIAGTEVAKESADV+ILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNF+S
Sbjct: 779 MGIAGTEVAKESADVVILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTS 838
Query: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 894
AC TG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMK++PVGRKG FI+NVMWRNI+
Sbjct: 839 ACFTGDAPLTAVQLLWVNMIMDTLGALALATEPPNNNLMKKAPVGRKGKFITNVMWRNIV 898
Query: 895 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
GQSLYQF ++WYLQT+GK +F L+G D++LNT+IFNTFVFCQV
Sbjct: 899 GQSLYQFAVMWYLQTQGKHLFGLEGYHADIVLNTIIFNTFVFCQV 943
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1205 bits (3118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/939 (63%), Positives = 731/939 (77%), Gaps = 12/939 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD--FEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAIAVTI+VVAVPEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKE- 474
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 475 ---RQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLR-KMGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG+
Sbjct: 769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGS 828
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN LMKR P+GR +FI+ MWRNI+GQS+YQ
Sbjct: 829 APLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQ 888
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+++ L GK + L+GPD ++LNT+IFN+FVFCQV
Sbjct: 889 LIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQV 927
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1200 bits (3105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/940 (63%), Positives = 738/940 (78%), Gaps = 11/940 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD--FEVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAAA-RPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSE--VPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAI+VTI+VVAVPEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK + S ++ LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSKESFELELSEEVQST--LLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLR-KIGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 771 TEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 830
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR+P+ R +FI+ MWRNI GQS+Y
Sbjct: 831 SAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVY 890
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
Q +++ L GK++ +LDGPD +LNT+IFN+FVFCQV
Sbjct: 891 QLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQV 930
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1190 bits (3079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/940 (63%), Positives = 726/940 (77%), Gaps = 5/940 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL ENF DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQENF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F G EY + ++ +G+ I PDEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIFSDGAK-KKEYKLTGDIIKAGYAINPDELALITSKHDSKALKMHG 121
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI+ K+ +S GI SE L+ R+ IYG+N++ E P+R FW++VW+AL DMTL+IL
Sbjct: 122 GVDGISIKVRSSFDHGIYASE--LDTRQNIYGVNRYAEKPSRSFWMFVWDALQDMTLIIL 179
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 180 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 239
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 240 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 299
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVATIIGK
Sbjct: 300 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATIIGK 359
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 360 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 419
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTNHM V K I E K
Sbjct: 420 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKS 479
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + +S LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 480 VTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 539
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GD AE +A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 540 KGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNGTSRWFCKGASEIILQMCDMMVDGDG 599
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 600 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 659
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 660 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSTEE 719
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LI IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 720 MRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 779
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+ G
Sbjct: 780 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIG 839
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV + +FI+ MWRNI+GQSLY
Sbjct: 840 SAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLY 899
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
Q ++ L G+ + + G D I+NTLIFN+FVFCQV
Sbjct: 900 QLFVLGALMFGGERLLNIKGADSKSIINTLIFNSFVFCQV 939
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/940 (62%), Positives = 716/940 (76%), Gaps = 27/940 (2%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL E+F DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQEHF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F DEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIF-----------------------SDDELALITSKHDSKALKMHG 99
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI++K+ +S GI S+ L+ R+ IYG+N++ E P+R FW++VW+A DMTL+IL
Sbjct: 100 GVDGISKKVRSSFDHGICASD--LDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIIL 157
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 158 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 217
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 218 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 277
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVAT+IGK
Sbjct: 278 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGK 337
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 338 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 397
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTN+M V K I E K
Sbjct: 398 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKS 457
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + + LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 458 VTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 517
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
G AE A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 518 EGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDG 577
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 578 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 637
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 638 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEE 697
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LIP IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 698 MRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 757
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+TG
Sbjct: 758 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 817
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV + +FI+ VMWRNI+GQSLY
Sbjct: 818 SAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLY 877
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
Q ++ L G+++ + G D I+NTLIFN+FVFCQV
Sbjct: 878 QLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQV 917
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/933 (62%), Positives = 714/933 (76%), Gaps = 10/933 (1%)
Query: 11 DVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVS 69
+V AKN SEEA +RWR G VKNR+RRFR +L KR +AE RR QEK RVA+ V
Sbjct: 16 EVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQEKLRVALFVQ 75
Query: 70 QAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLS 129
+AALQFI + +E+ +PE GF + +EL SIV GHD K L+ H GV+GIA K++
Sbjct: 76 KAALQFIDAVR-KTEHPLPELARQCGFSVSAEELASIVRGHDTKSLRFHNGVDGIARKVA 134
Query: 130 TSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVV 189
S+ DG+ + + L R E+YG N++TE P R FW+++W+A DMTL++LA CA VS+ +
Sbjct: 135 VSLADGVKSDDAGL--RAEVYGANQYTEKPPRTFWMFLWDASQDMTLLLLAFCAAVSVAI 192
Query: 190 GIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 249
G+ATEGWP G +DG+GI+++ILLVV +TA SDYKQSLQF+DLD+EKKKI VQV R+G+R+
Sbjct: 193 GLATEGWPSGMYDGVGIMLTILLVVMITAASDYKQSLQFRDLDKEKKKIDVQVTRDGYRQ 252
Query: 250 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGT 309
K+SIYD++ GDIVHL +GDQVPADGLF+ G+S +++ES+L+GESEPV+V+ N FLL GT
Sbjct: 253 KVSIYDIVVGDIVHLSIGDQVPADGLFIDGYSFVVDESNLSGESEPVHVSTANRFLLGGT 312
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KVQ+GS +MLVT VGMRT+WG LM TLS+GG+DETPLQVKLNGVATIIGKIGL FAV+TF
Sbjct: 313 KVQDGSARMLVTAVGMRTEWGNLMETLSQGGEDETPLQVKLNGVATIIGKIGLAFAVLTF 372
Query: 370 AV-MVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
V M + L + G W DAL +L FFA+AVTI+VVAVPEGLPLAVTLSLAFAM
Sbjct: 373 TVLMARFLLGKAGAPGGLLRWRMVDALAVLNFFAVAVTIIVVAVPEGLPLAVTLSLAFAM 432
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488
KK+M ++ALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K + + N+KG
Sbjct: 433 KKLMQERALVRHLSACETMGSASCICTDKTGTLTTNHMVVEKIWASGAAQTMSNAKGFDQ 492
Query: 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ 548
SS+ + +K+LL+ +F+ +G EVV G+ + I+GTPTETAILEFGL + + E
Sbjct: 493 LTSSMSETFAKVLLEGVFHCSGSEVVRGKDGRHTIMGTPTETAILEFGLAVEKRARIEHT 552
Query: 549 ASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC--KGASEIILAACDKFLNSNGEVVPLNE 606
+ +KVEPFNSVKK M VVI P G R KGASE++L+ C L+ G V L +
Sbjct: 553 GAGKLKVEPFNSVKKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTD 612
Query: 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVK 666
A + I+ FA EALRTLCLA ++ EGYT I + GIKDP+RPGV+
Sbjct: 613 AKAKRVASAIDAFACEALRTLCLAYQDVDGGGGDIP---GEGYTLIAVFGIKDPLRPGVR 669
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E+VA C +AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGPEFR K +++ ++IPK
Sbjct: 670 EAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRNKDPDQMREIIPK 729
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
IQVMARS P+DKHTLV +LR EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE+
Sbjct: 730 IQVMARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEN 789
Query: 787 ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAV 846
ADVII+DDNFSTI+ VAKWGRSVYINIQKFVQFQLTVNVVAL+VNF SA TG+APLT V
Sbjct: 790 ADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTIV 849
Query: 847 QLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWY 906
QLLWVN+IMDTLGALALATEPPN +MKR PVGR NFI+ VMWRNI+GQS+YQ +++
Sbjct: 850 QLLWVNLIMDTLGALALATEPPNDAMMKRPPVGRGDNFITKVMWRNIVGQSIYQLVVLGV 909
Query: 907 LQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
L RGK++ +++GP D +LNT +FNTFVFCQV
Sbjct: 910 LLLRGKSLLQINGPQADSLLNTFVFNTFVFCQV 942
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 950 | ||||||
| 224127276 | 1020 | predicted protein [Populus trichocarpa] | 0.988 | 0.920 | 0.864 | 0.0 | |
| 289540885 | 1019 | calcium ATPase [Trifolium repens] | 0.997 | 0.930 | 0.840 | 0.0 | |
| 351720666 | 1019 | plasma membrane Ca2+-ATPase [Glycine max | 0.997 | 0.930 | 0.839 | 0.0 | |
| 225458828 | 1018 | PREDICTED: calcium-transporting ATPase 1 | 0.986 | 0.920 | 0.850 | 0.0 | |
| 297851218 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.988 | 0.920 | 0.835 | 0.0 | |
| 356510560 | 1019 | PREDICTED: calcium-transporting ATPase 1 | 0.997 | 0.930 | 0.838 | 0.0 | |
| 225438996 | 1019 | PREDICTED: calcium-transporting ATPase 2 | 0.987 | 0.920 | 0.829 | 0.0 | |
| 30690083 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.988 | 0.920 | 0.829 | 0.0 | |
| 516118 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.988 | 0.920 | 0.828 | 0.0 | |
| 509810 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.988 | 0.920 | 0.827 | 0.0 |
| >gi|224127276|ref|XP_002320033.1| predicted protein [Populus trichocarpa] gi|222860806|gb|EEE98348.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1639 bits (4244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 812/939 (86%), Positives = 877/939 (93%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
MENYLNENF DVKAKN+S+EALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MENYLNENFGDVKAKNSSDEALQRWRKLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFIH LNLSS+Y VP+EV +GFQIC DELGSIVEGHD+KKLK+HG
Sbjct: 61 KLRVAVLVSKAALQFIHCLNLSSDYVVPKEVEEAGFQICADELGSIVEGHDVKKLKIHGE 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VEGIAEKLSTSI DGISTSE L+N RKEIYGINKFTESP RGF V+VWEAL DMTLMIL
Sbjct: 121 VEGIAEKLSTSINDGISTSEDLVNGRKEIYGINKFTESPPRGFLVFVWEALQDMTLMILG 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWPKG+HDGLGIV SILLVVFVTATSDYKQSLQFKDLDREKKKITV
Sbjct: 181 VCALVSLIVGIAMEGWPKGSHDGLGIVASILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+KISIYDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNVNA
Sbjct: 241 QVTRNAVRQKISIYDLLPGDIVHLFIGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 ANPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQGL RKL+EGTHW WSGDDA E+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFAVLVQGLCNRKLREGTHWIWSGDDAREMLEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGS+T+ICSDKTGTLTTNHMTV+KAC+ E +EV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSSTTICSDKTGTLTTNHMTVVKACVSGETREV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +FGS+IP A +LL+SIFNNTGGEVV+ E K +ILGTPTETA+LEFGLLLG
Sbjct: 481 GSSESTTSFGSAIPDLAKSVLLESIFNNTGGEVVVNEERKVQILGTPTETALLEFGLLLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD + +++ SKIVKVEPFNS KK+MGVVIELP GGFR HCKGASEI+LAACDK ++SNG
Sbjct: 541 GDSRQKQEKSKIVKVEPFNSTKKRMGVVIELPNGGFRAHCKGASEIVLAACDKVIDSNGV 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA++NHLN+TIE+FASE+LRTLCLA +EIGNE+S ++PIP++GYTCI IVGIKDP
Sbjct: 601 VVPLDEASINHLNDTIERFASESLRTLCLAYLEIGNEYSDESPIPSKGYTCIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI VRMVTGDN+ TAKAIARECGILTD+GIAIEGP FREKS+EEL
Sbjct: 661 VRPGVKESVAICRSAGIVVRMVTGDNLTTAKAIARECGILTDDGIAIEGPAFREKSEEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+LIPKIQVMARSSP+DKH LV+HLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 QELIPKIQVMARSSPLDKHALVRHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
F++IWYLQTRGKAVFR+DGPD DLILNTLIFN+FVFCQV
Sbjct: 901 FVVIWYLQTRGKAVFRIDGPDSDLILNTLIFNSFVFCQV 939
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|289540885|gb|ADD09562.1| calcium ATPase [Trifolium repens] | Back alignment and taxonomy information |
|---|
Score = 1630 bits (4222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/949 (84%), Positives = 868/949 (91%), Gaps = 1/949 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF DVK KN+SEEALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLNDNFGDVKPKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL LSSEY VPEEV A+GF+IC DE GSIV+G D+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLRLSSEYKVPEEVKAAGFEICADEAGSIVDGRDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+EGI +KLS+S+ DGISTSE LLNRRKEIYGINKFTESPARGFWV+VWEAL D TLMILA
Sbjct: 121 IEGITDKLSSSVNDGISTSESLLNRRKEIYGINKFTESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL VGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCAFVSLAVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R+KISIYDLLPGDIVHL +GDQVPADGLF+SGFSV INESSLTGESEPVNV+
Sbjct: 241 QVTRNGYRQKISIYDLLPGDIVHLNIGDQVPADGLFLSGFSVCINESSLTGESEPVNVSD 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKLQEG+ WTWSGDDA+E++EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLQEGSQWTWSGDDAMELVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
NS T F +P SA +LL+SIFNNTGGEVV E K EILG+PTETAILEFGL LG
Sbjct: 481 KNSTDTSDFSFDVPDSAIAILLESIFNNTGGEVVKNENGKIEILGSPTETAILEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GG+R HCKGASEIILAACDKF++ NGE
Sbjct: 541 GDFHKERQVSKLVKVEPFNSIKKRMGVVLQLPDGGYRAHCKGASEIILAACDKFVDKNGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E ++ HLN+TIEKFA+EALRTLCLA ++I +EF +PIP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDEDSIRHLNDTIEKFANEALRTLCLAYVDIHDEFLVGSPIPIDGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICR+AGITVRMVTGDNINTAKAIARECGILTD GIAIEGPEFRE S+E+L
Sbjct: 661 VRPGVRESVAICRAAGITVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREMSEEKL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVK LRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKQLRTTFEEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF+SACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFI+NVMWRNI GQS+YQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFITNVMWRNITGQSIYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949
F++IW LQTRGK F +DGPD DLILNTLIFN+FVF QV R E
Sbjct: 900 FVVIWLLQTRGKTAFHIDGPDSDLILNTLIFNSFVFFQVFNEISSRDME 948
|
Source: Trifolium repens Species: Trifolium repens Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720666|ref|NP_001237184.1| plasma membrane Ca2+-ATPase [Glycine max] gi|11066056|gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1617 bits (4188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 797/949 (83%), Positives = 861/949 (90%), Gaps = 1/949 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MEIYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAA+QFIHGLNLSSEYTVPEEV A+GF+IC DELGSIVEG D KKLK HGG
Sbjct: 61 KFRVAVLVSQAAIQFIHGLNLSSEYTVPEEVKAAGFEICADELGSIVEGRDSKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTSEHL+N+RKEIYG+NKF ESPARGFWVYVWE+L D TLMILA
Sbjct: 121 VDAITNKLNTSVDDGISTSEHLVNQRKEIYGVNKFAESPARGFWVYVWESLQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+S+YDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSMYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ W WSGDDA++I+EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWMWSGDDAMQIVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KA IC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LEFGL LG
Sbjct: 481 NGSKVYSDFSSDIHDSALAILLESIFNNTGGEVVKNKDEKIEILGSPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GGFR HCKGASEIILA+CDK ++S+GE
Sbjct: 541 GDFHKERQRSKLVKVEPFNSIKKRMGVVLQLPDGGFRAHCKGASEIILASCDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VV LNE ++NHLN IE FA EALRTLCLA ++I +EFS IPT GYTCIGIVGIKDP
Sbjct: 601 VVALNEDSINHLNNMIETFAGEALRTLCLAYLDIHDEFSVGTAIPTRGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+EEL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALIVNFSSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFISNVMWRNILGQS+YQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPNEELMKRPPVGRKGNFISNVMWRNILGQSIYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949
F++IW+LQTRGK F LDGPD DLILNTLIFN FVFCQV R E
Sbjct: 900 FVVIWFLQTRGKVTFHLDGPDSDLILNTLIFNAFVFCQVFNEISSRDME 948
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458828|ref|XP_002285297.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1602 bits (4147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 799/939 (85%), Positives = 875/939 (93%), Gaps = 2/939 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF VK KN+SEEALQRWRKLC VKN KRRFRFTANLSKRFEA+AIRRSNQE
Sbjct: 1 MESYLNDNFGGVKPKNSSEEALQRWRKLCWVVKNPKRRFRFTANLSKRFEAQAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL SS+Y PEEV A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGL--SSDYVAPEEVTAAGFQICADELGSIVEGHDLKKLKIHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T+GI ++ LLN+RKEIYGINKFTE+ GFWV+VWEALHDMTLMILA
Sbjct: 119 VQGIAEKLSTSTTNGIPMADDLLNKRKEIYGINKFTETKVPGFWVFVWEALHDMTLMILA 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGI EGWPKGAHDGLGIV SILLVVFVTA SDY+QSLQFKDLD EKKKITV
Sbjct: 179 VCAFVSLLVGIIMEGWPKGAHDGLGIVASILLVVFVTAISDYRQSLQFKDLDTEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+KISIYDL+PGDIVHL +GDQVPADGLFV GFS+LINESSLTGESEPV+VN+
Sbjct: 239 QVTRDGQRQKISIYDLVPGDIVHLSIGDQVPADGLFVLGFSLLINESSLTGESEPVHVNS 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK+
Sbjct: 299 ENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKL 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFA VTFAV+VQGLF+RKL+EG+HW+WSGDDALE+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAAVTFAVLVQGLFSRKLREGSHWSWSGDDALEMLEFFAVAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMM+DKALVRHLAACETMGSATSICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 419 TLSLAFAMKKMMHDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKVCICGKIKEV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +F S IP A ++LLQSIFNNTGGE+V + NKTEILGTPTE A+LEFGLLLG
Sbjct: 479 SSSEETSSFCSGIPDFAVRILLQSIFNNTGGEIVTNKDNKTEILGTPTEAALLEFGLLLG 538
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQAERQASK+VKVEPFNS KK+MGVV+E+PEGGFR H KGASEI+LA+CDK ++SNG+
Sbjct: 539 GDFQAERQASKLVKVEPFNSAKKRMGVVLEIPEGGFRAHSKGASEIVLASCDKVIDSNGD 598
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNEA+ NHL +TIE+FASEALRTLCLA ME+G+EFSA++P+P++GYTCIGIVGIKDP
Sbjct: 599 VVPLNEASFNHLKDTIERFASEALRTLCLAYMELGSEFSAESPLPSKGYTCIGIVGIKDP 658
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI+VRMVTGDNINTAKAIARECGILTD GIAIEGP FREKS+EEL
Sbjct: 659 VRPGVKESVAICRSAGISVRMVTGDNINTAKAIARECGILTDEGIAIEGPVFREKSEEEL 718
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKH LVKHLRT L EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 719 QKLIPKIQVMARSSPLDKHILVKHLRTALEEVVAVTGDGTNDAPALHEADIGLAMGIAGT 778
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVII+DDNFSTIVTV KWGRS+YINIQKFVQFQLTVN+VALIVNFSSACLTGN
Sbjct: 779 EVAKESADVIIMDDNFSTIVTVGKWGRSIYINIQKFVQFQLTVNIVALIVNFSSACLTGN 838
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKRSPVGRK NFISNVMWRNI+GQSLYQ
Sbjct: 839 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKENFISNVMWRNIIGQSLYQ 898
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
F+IIW+LQTRGKA F LDGPD DLILNT+IFN+FVFCQV
Sbjct: 899 FVIIWFLQTRGKAFFHLDGPDSDLILNTIIFNSFVFCQV 937
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297851218|ref|XP_002893490.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] gi|297339332|gb|EFH69749.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1601 bits (4146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 785/939 (83%), Positives = 850/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEY VPEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYIVPEEVRQAGFEICPDELGSIVEGHDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGINKFTESP RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINKFTESPTRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDYKQSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYKQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+GD+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDASHWIWTGDELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ S F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NVSDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPEG FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPEGHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE + HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLNEESTGHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQV
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510560|ref|XP_003524005.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1600 bits (4144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/949 (83%), Positives = 861/949 (90%), Gaps = 1/949 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGLNLS+EYTVPEEV +GF+IC DELGSIVEG D+KKLK HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLNLSTEYTVPEEVKTAGFEICADELGSIVEGRDLKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTS+HLLN+RKEIYG+NKF ESPARGFWV+VWEAL D TLMILA
Sbjct: 121 VDAITSKLNTSVDDGISTSQHLLNQRKEIYGVNKFAESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+SIYDLLPGDIVHL +GDQVPADG FVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSIYDLLPGDIVHLNIGDQVPADGFFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ WTWSGDDA++I+EFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWTWSGDDAMQIVEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKVCICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK + F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LE GL LG
Sbjct: 481 NGSKVSSDFSSDIHDSALAVLLESIFNNTGGEVVKNKDEKIEILGSPTETALLELGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS KK+MGVV++LP+GGFR HCKGASEIILAACDK ++S+GE
Sbjct: 541 GDFLKERQRSKLVKVEPFNSTKKRMGVVLQLPDGGFRAHCKGASEIILAACDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE ++NHLN IE FA EALRTLCLA ++I +EFS PIPT GYT I IVGIKDP
Sbjct: 601 VVPLNEDSINHLNNMIETFAGEALRTLCLAYLDIDDEFSVGTPIPTRGYTFIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+ EL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEVEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFISNVMWRNILGQS+YQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFISNVMWRNILGQSIYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949
F++IW+LQTRGK F LDGPD DLILNTLIFN+FVFCQV R E
Sbjct: 900 FVVIWFLQTRGKVTFHLDGPDSDLILNTLIFNSFVFCQVFNEISSRDME 948
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438996|ref|XP_002284429.1| PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1597 bits (4136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/939 (82%), Positives = 854/939 (90%), Gaps = 1/939 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENFS VK K++S+E LQRWR LC VKN KRRFRFTANLSKR EA A+RR+NQE
Sbjct: 1 MESYLDENFSGVKPKHSSDEVLQRWRNLCSVVKNPKRRFRFTANLSKRGEAAAMRRTNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AALQFI G+ +S +Y VPEE+ A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KLRIAVLVSKAALQFIQGVPVS-DYVVPEEIKAAGFQICADELGSIVEGHDVKKLKIHGG 119
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T G++ LLN R+EIYGINKFTE+ ARGF V+VWEALHDMTL+ILA
Sbjct: 120 VDGIAEKLSTSTTYGLTADNKLLNHRQEIYGINKFTETQARGFLVFVWEALHDMTLIILA 179
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWP GAHDGLGIV SILLVV VTATSDY+QSLQF+DLD+EKKKI++
Sbjct: 180 VCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISI 239
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R K+SIYDLLPGDIVHL +GDQVPADGLFVSGF V I+ESSLTGESEPV V+A
Sbjct: 240 QVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGESEPVMVSA 299
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKM++TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT IGKI
Sbjct: 300 ENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATFIGKI 359
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAVVTFAV+VQGLF RKL EGTHW+WSGDDALE+LEFFAIAVTIVVVAVPEGLPLAV
Sbjct: 360 GLVFAVVTFAVLVQGLFNRKLGEGTHWSWSGDDALEMLEFFAIAVTIVVVAVPEGLPLAV 419
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT ICSDKTGTLTTNHMTV+K+CIC +K+V
Sbjct: 420 TLSLAFAMKKMMNDKALVRHLAACETMGSATCICSDKTGTLTTNHMTVVKSCICMNVKDV 479
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
D +F S IP S KLLLQSIFNN+GGEVVI + K EILG+PT+ A+LEFGL LG
Sbjct: 480 DRQSNASSFCSEIPDSTVKLLLQSIFNNSGGEVVINKEGKLEILGSPTDAALLEFGLFLG 539
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ ERQA K++KVEPFNS KK+MGVV+ELPEGG R H KGASEIILAACDK ++SNGE
Sbjct: 540 GDFQGERQAPKLIKVEPFNSTKKRMGVVLELPEGGLRAHTKGASEIILAACDKMIDSNGE 599
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA+++HL TI +FASEALRTLCLA ME+ N FS + PIP GYTCIGIVGIKDP
Sbjct: 600 VVPLDEASIDHLKATINQFASEALRTLCLAYMELENGFSPNDPIPLSGYTCIGIVGIKDP 659
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP+FREKS+EEL
Sbjct: 660 VRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 FKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTI TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKR+PVGR+GNFISNVMWRNILGQSLYQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRAPVGRRGNFISNVMWRNILGQSLYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
FL+IWYLQ GKA+F+L+GPD DLILNTLIFN+FVFCQV
Sbjct: 900 FLVIWYLQVEGKAIFQLNGPDSDLILNTLIFNSFVFCQV 938
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690083|ref|NP_849716.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] gi|30316378|sp|Q37145.3|ACA1_ARATH RecName: Full=Calcium-transporting ATPase 1, chloroplastic; AltName: Full=Ca(2+)-ATPase isoform 1; AltName: Full=Plastid envelope ATPase 1; Flags: Precursor gi|12320888|gb|AAG50579.1|AC079280_10 envelope Ca2+-ATPase [Arabidopsis thaliana] gi|332192757|gb|AEE30878.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1593 bits (4125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/939 (82%), Positives = 850/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQV
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|516118|gb|AAD10212.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1591 bits (4119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/939 (82%), Positives = 849/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQV
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|509810|gb|AAD10211.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1588 bits (4111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/939 (82%), Positives = 848/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+ EEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLSEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQV
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 950 | ||||||
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.988 | 0.920 | 0.818 | 0.0 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.984 | 0.922 | 0.790 | 0.0 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.994 | 0.931 | 0.774 | 0.0 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.975 | 0.904 | 0.629 | 1.8e-309 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.977 | 0.901 | 0.630 | 2.3e-309 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.970 | 0.862 | 0.472 | 6.4e-218 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.957 | 0.847 | 0.482 | 8.2e-218 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.968 | 0.847 | 0.470 | 3.1e-209 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.929 | 0.854 | 0.445 | 3.9e-195 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.461 | 0.406 | 0.487 | 3.2e-186 |
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3963 (1400.1 bits), Expect = 0., P = 0.
Identities = 769/939 (81%), Positives = 839/939 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+F PEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQV
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3848 (1359.6 bits), Expect = 0., P = 0.
Identities = 743/940 (79%), Positives = 836/940 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+F PEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNFSSACLTG
Sbjct: 777 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTG 836
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++Y
Sbjct: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVY 896
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
QF++IW LQ +GKA+F LDGPD L+LNTLIFN FVFCQV
Sbjct: 897 QFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQV 936
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3768 (1331.5 bits), Expect = 0., P = 0.
Identities = 737/951 (77%), Positives = 828/951 (87%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+F PEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V SK + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 VA-SKSS-SLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
GTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT
Sbjct: 777 GTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 836
Query: 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSL 898
G+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++
Sbjct: 837 GSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAV 896
Query: 899 YQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949
YQF+IIW LQ +GK++F L G D L+LNTLIFN FVFCQV R E
Sbjct: 897 YQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREME 947
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2969 (1050.2 bits), Expect = 1.8e-309, P = 1.8e-309
Identities = 591/939 (62%), Positives = 720/939 (76%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD-F-EVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKER 475
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 476 QEEN----FQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG+
Sbjct: 769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGS 828
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN LMKR P+GR +FI+ MWRNI+GQS+YQ
Sbjct: 829 APLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQ 888
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
+++ L GK + L+GPD ++LNT+IFN+FVFCQV
Sbjct: 889 LIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQV 927
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2968 (1049.8 bits), Expect = 2.3e-309, P = 2.3e-309
Identities = 593/940 (63%), Positives = 727/940 (77%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD-F-EVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAA-ARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK +F + LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSK--ESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 771 TEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 830
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR+P+ R +FI+ MWRNI GQS+Y
Sbjct: 831 SAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVY 890
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQV 939
Q +++ L GK++ +LDGPD +LNT+IFN+FVFCQV
Sbjct: 891 QLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQV 930
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2105 (746.1 bits), Expect = 6.4e-218, P = 6.4e-218
Identities = 454/960 (47%), Positives = 623/960 (64%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA-EAIR--RSNQE 60
Y + F KN E L+RWR+ V N RRFR+T +L + + + +R R++ +
Sbjct: 26 YEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQ 84
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
R A L AA + + G+ +S P F I +++ SI +I L+ GG
Sbjct: 85 AIRAAHLFKAAASR-VTGI--ASPLPTP---GGGDFGIGQEQIVSISRDQNIGALQELGG 138
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V G+++ L T++ GI + + +RK +G N + + R FW +VWEA D+TL+IL
Sbjct: 139 VRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFVWEASQDLTLIILI 198
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
V A+ SL +GI TEG KG +DG+ I ++LLV+ VTATSDY+QSLQF++L+ EK+ I +
Sbjct: 199 VAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNEEKRNIRL 258
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
+V R+G R +ISIYD++ GD++ L +GDQVPADG+ V+G S+ ++ESS+TGES+ V N+
Sbjct: 259 EVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNS 318
Query: 301 L-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
+PFL+SG KV +G+ MLVT VG+ T+WG LMA++SE ETPLQV+LNGVAT IG
Sbjct: 319 TKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNGVATFIGI 378
Query: 360 IGLFFAVVTFAVMVQGLFT--RKLQEGTHWTWSGDDALE-----ILEFFXXXXXXXXXXX 412
+GL A V V+V FT K ++G G E ++E F
Sbjct: 379 VGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVVVAV 438
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++ C
Sbjct: 439 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE-C 497
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532
++++D+ P S +P++ + +L++ I +NT G V E + ++ G+PTE AI
Sbjct: 498 YAG-LQKMDS----PDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSPTERAI 552
Query: 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592
L + + LG DF A + S V+ PFNS KK+ GV ++ P+ +H KGA+EI+L +C
Sbjct: 553 LNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGSCT 612
Query: 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI-GNEFSADAP------IP 645
+++ + V ++E + L + I+ A+ +LR + +A ++ D +P
Sbjct: 613 HYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWELP 672
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
+ + IVGIKDP RPGVK SV +C+ AG+ VRMVTGDNI TAKAIA ECGIL +
Sbjct: 673 EDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSD 732
Query: 706 A-----IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760
A IEG FR S+EE ++ +I VM RSSP DK LV+ L+ G VVAVTGDGT
Sbjct: 733 ASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR-GHVVAVTGDGT 791
Query: 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820
NDAPALHEADIGLAMGI GTEVAKE +D+IILDDNF ++V V +WGRSVY NIQKF+QFQ
Sbjct: 792 NDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQ 851
Query: 821 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGR 880
LTVNV AL++N +A G PLTAVQLLWVN+IMDTLGALALATEPP LM R+PVGR
Sbjct: 852 LTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGR 911
Query: 881 KGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG-PDPDLILNTLIFNTFVFCQV 939
+ I+N+MWRN+ Q++YQ ++ L RG ++ L P+ + + NT+IFN FV CQV
Sbjct: 912 REPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNTVIFNAFVICQV 971
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2104 (745.7 bits), Expect = 8.2e-218, P = 8.2e-218
Identities = 459/952 (48%), Positives = 617/952 (64%)
Query: 12 VKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQA 71
+ +KN S E LQ+WRK V N RRFR+T +L K E +R +K R A
Sbjct: 34 IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLA 88
Query: 72 ALQFIH-GLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLST 130
A +F+ G E T A F I P++L + + H+ L+ +GG +G+A L T
Sbjct: 89 ANRFMDMGRESGVEKTTGPATPAGDFGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKT 148
Query: 131 SITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190
+ GIS + L +RK IYG N + +GF ++W+A HD+TL+IL V A+ SL +G
Sbjct: 149 NPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALG 208
Query: 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRK 250
I TEG +G +DG I +++LV+ VTA SDYKQSLQF++L+ EK+ I ++V R G R +
Sbjct: 209 IKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLNDEKRNIHLEVLRGGRRVE 268
Query: 251 ISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGT 309
ISIYD++ GD++ L +G+QVPADG+ +SG S+ ++ESS+TGES+ VN +A +PFL+SG
Sbjct: 269 ISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSGC 328
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KV +G+ MLVT VG+ T+WG LMA++SE +ETPLQV+LNGVAT IG IGL A
Sbjct: 329 KVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVL 388
Query: 370 AVMVQGLFTRKLQE---GTHW----TWSGDDALEILEFFXXXXXXXXXXXPEGLPLAVTL 422
+++ FT ++ G + T G ++++ PEGLPLAVTL
Sbjct: 389 VILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTL 448
Query: 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDN 482
+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV+++ K+ D
Sbjct: 449 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGG--KKTDT 506
Query: 483 SKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGG 541
+ +PA+ + L+++ I NT G + + EG E G+PTE AIL +G+ LG
Sbjct: 507 EQ--------LPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGM 558
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
+F+ R S I+ PFNS KK+ GV ++ +G VH KGASEI+LA+C +++ +G V
Sbjct: 559 NFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNV 618
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLAC-------MEIGNEFSADAPIPTEGYTCIGI 654
P+ + + I A LR + LA + G E S +P + + I
Sbjct: 619 APMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWV-LPEDDLILLAI 677
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-----IAIEG 709
VGIKDP RPGVK+SV +C++AG+ VRMVTGDN+ TA+AIA ECGIL+ + IEG
Sbjct: 678 VGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEG 737
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
FRE +D E K+ KI VM RSSP DK LV+ LR G VVAVTGDGTNDAPALHEA
Sbjct: 738 KSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ-GHVVAVTGDGTNDAPALHEA 796
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829
DIGLAMGIAGTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV AL+
Sbjct: 797 DIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALV 856
Query: 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVM 889
+N +A +G+ PLTAVQLLWVN+IMDTLGALALATEPP LM R PVGRK I+N+M
Sbjct: 857 INVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIM 916
Query: 890 WRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPD---LILNTLIFNTFVFCQ 938
WRN+L Q++YQ ++ L RG ++ L+ + + NT+IFN FV CQ
Sbjct: 917 WRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQ 968
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2023 (717.2 bits), Expect = 3.1e-209, P = 3.1e-209
Identities = 451/959 (47%), Positives = 616/959 (64%)
Query: 6 NENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVA 65
++ F KN S E+L+RWR+ V N RRFR+T +L+K + RR R
Sbjct: 42 DDPFDIDNTKNASVESLRRWRQ-AALVLNASRRFRYTLDLNKEEHYDNRRRM----IRAH 96
Query: 66 VLVSQAALQFIHGLNLSSEYTVPEEVAASG-FQICPDELGSIVEGHDIKKLKVHGGVEGI 124
V +AAL F + A++G F I ++L S+ ++ L+ +GGV+G+
Sbjct: 97 AQVIRAALLFKLAGEQQIAFGSSTPAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGV 156
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AEKL +++ GI+ E + RK +G N + + + F++++WEA D+TL+IL + A+
Sbjct: 157 AEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAV 216
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244
SL +GI TEG +G DG I ++LLV+ VTA SDY+QSLQF++L+ EK+ I ++V R
Sbjct: 217 TSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMR 276
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
G KISIYD++ GD++ L +GDQVPADG+ +SG S+ I+ESS+TGES+ V+ + +PF
Sbjct: 277 GGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSLAIDESSMTGESKIVHKDQKSPF 336
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
L+SG KV +G MLVT VG+ T+WG LMA++SE +ETPLQV+LNG+AT IG +GL
Sbjct: 337 LMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGLATFIGIVGLSV 396
Query: 365 AVVTFAVMVQGLFTRKLQE---GTHW---TWSGDDALE-ILEFFXXXXXXXXXXXPEGLP 417
A+V ++ FT Q+ T + T S D ++ ++ F PEGLP
Sbjct: 397 ALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLP 456
Query: 418 LAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477
LAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++
Sbjct: 457 LAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSK 516
Query: 478 KEV-DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEF 535
+V DN G P + L+ + + NT G + +G + EI G+PTE AIL +
Sbjct: 517 MDVADNPSGLH------PKLVA-LISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSW 569
Query: 536 GLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595
LG F R S I+ PFNS KK+ GV + + +H KGA+EI+LA C +++
Sbjct: 570 AYKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYM 629
Query: 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC--MEIGN----EFSADA-PIPTEG 648
+SNG + + E+ I+ A +LR + +AC E+ + D +P +
Sbjct: 630 DSNGTLQSI-ESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDE 688
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA-- 706
+ IVGIKDP RPGV+E+V IC SAG+ VRMVTGDN+ TAKAIA ECGIL+ + A
Sbjct: 689 LILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVE 748
Query: 707 ---IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
IEG FRE S++E ++ KI VM RSSP DK LV+ LR G+VVAVTGDGTNDA
Sbjct: 749 PTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKN-GDVVAVTGDGTNDA 807
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 823
PALHEADIGL+MGI+GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+QFQLTV
Sbjct: 808 PALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTV 867
Query: 824 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGN 883
NV ALI+N +A +G+ PL AVQLLWVN+IMDTLGALALATEPP LM R+PVGR+
Sbjct: 868 NVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREP 927
Query: 884 FISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDL---ILNTLIFNTFVFCQV 939
I+N+MWRN+L QS YQ ++ L G ++ L+ + + NT+IFN FV CQ+
Sbjct: 928 LITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQI 986
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1890 (670.4 bits), Expect = 3.9e-195, P = 3.9e-195
Identities = 412/925 (44%), Positives = 590/925 (63%)
Query: 35 RKRRFRFTANLSKRFEAEAIR-----RSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPE 89
R+ RF + A S R ++ R + + ++ +S AL+ G ++S +P
Sbjct: 26 RRWRFAYAAIYSMRAMLSLVKEIVPARIDPKTSDASLSLSYTALESGEGAKINS---MPL 82
Query: 90 EVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEI 149
+ I ++L I++G D+ ++ GGVEG+A L T+ T GI +E ++RR+++
Sbjct: 83 SYVPA---IDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDL 139
Query: 150 YGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMS 209
+G N + + P +G +V+EA D+T++IL VCA+ SL GI G +G ++G I ++
Sbjct: 140 FGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVA 199
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+ LV+ V+A S+++Q QF L + I V+V R+ R+ ISI+D++ GD+V L +GDQ
Sbjct: 200 VFLVIVVSALSNFRQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQ 259
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQ 328
+PADGLF+ G S+ ++ESS+TGES+ + V+ NPFL SGTK+ +G +MLV +VGM T
Sbjct: 260 IPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTT 319
Query: 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 388
WG+ M+++++ + TPLQV+L+ + + IGKIGL A + V++ FT ++
Sbjct: 320 WGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKRE 379
Query: 389 WSGD----DAL--EILEFFXXXXXXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++G D + ++ PEGLPLAVTL+LA++MK+MM+D+A+VR L+
Sbjct: 380 YNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLS 439
Query: 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502
ACETMGSAT IC+DKTGTLT N M V K + +E D++K I LL
Sbjct: 440 ACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTK-------MISPDVLDLLY 492
Query: 503 QSIFNNTGGEVVIGEGNKT-EILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNS 560
Q NT G V + + T E G+PTE A+L + +L LG D ++ +Q ++++VE F+S
Sbjct: 493 QGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSS 552
Query: 561 VKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619
KK+ GV++ + VH KGA+E++LA C + S G V ++ A + + I+
Sbjct: 553 AKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGM 612
Query: 620 ASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 679
A+ +LR + A N D+ + +G T +GIVG+KDP RPGV ++V C+ AG+T+
Sbjct: 613 AASSLRCIAFAHKIASN----DSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTI 668
Query: 680 RMVTGDNINTAKAIARECGILTDNG-----IAIEGPEFREKSDEELSKLIPKIQVMARSS 734
+M+TGDN+ TAKAIA ECGIL N +EG +FR +DEE + + KI+VMARSS
Sbjct: 669 KMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSS 728
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794
P DK +VK LR G VVAVTGDGTNDAPAL EADIGL+MGI GTEVAKES+D++ILDD
Sbjct: 729 PSDKLLMVKCLRLK-GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDD 787
Query: 795 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMI 854
NF+++ TV KWGR VY NIQKF+QFQLTVNV AL++NF +A G PLTAVQLLWVN+I
Sbjct: 788 NFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLI 847
Query: 855 MDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV 914
MDTLGALALATE P +L+KR PVGR I+NVMWRN+L QSLYQ ++ LQ +G ++
Sbjct: 848 MDTLGALALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSI 907
Query: 915 FRLDGPDPDLILNTLIFNTFVFCQV 939
F + D TLIFNTFV CQV
Sbjct: 908 FSVRKEVKD----TLIFNTFVLCQV 928
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1027 (366.6 bits), Expect = 3.2e-186, Sum P(2) = 3.2e-186
Identities = 222/455 (48%), Positives = 301/455 (66%)
Query: 500 LLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEF-GLLLGGDFQAERQASK--IVKVE 556
LL + I N+ + + +G+ TE A+LE+ + ++ R+ +K +VKV
Sbjct: 454 LLAEGISLNSTAYIEKHTDRLNDHIGSKTECALLEWLETMPNQSYETVRKENKDRVVKVY 513
Query: 557 PFNSVKKQMGVVIELPE---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613
PF+S KK V++ + GG ++ KGA+EI+L C ++ NGE ++ L
Sbjct: 514 PFSSEKKMSAVLMNQNQNISGGLIIYVKGAAEIVLNNCTNIVDKNGESTQMSRDEKMLLQ 573
Query: 614 ETIEKFASEALRTLCLACMEIGNEFSAD--APIPTEGYTCIGIVGIKDPMRPGVKESVAI 671
+ IE FASE LRTL LA EI NE S++ A + G T +G+VGIKDP+R V +V
Sbjct: 574 KDIEIFASEGLRTLVLAYKEINNEPSSEDEAKVIYTGLTFLGLVGIKDPVRKEVPRAVKR 633
Query: 672 CRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731
C+ AGI VRM+TGDNI TAK IARECGIL D G+AIEGP+FR +D++L +IP +QV+A
Sbjct: 634 CQGAGIFVRMLTGDNILTAKNIARECGILKDGGVAIEGPQFRLLTDDQLDTIIPHLQVIA 693
Query: 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 791
R SP DK LV LR LGEVVAVTGDG NDAP L EAD+G +MGIAGTEVAKE++D+++
Sbjct: 694 RCSPTDKFRLVHRLRE-LGEVVAVTGDGVNDAPQLKEADVGFSMGIAGTEVAKEASDIVL 752
Query: 792 LDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWV 851
LDDNF++I WGR+VY +I+KF+QFQLTVN+VA+++ F + G +PL VQLLWV
Sbjct: 753 LDDNFNSIAKAVIWGRNVYDSIRKFIQFQLTVNIVAVLIAFVGSITNGESPLRPVQLLWV 812
Query: 852 NMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRG 911
N+IMDTLGALAL+TEPP+ +L R P GR + I+ MWRNI+GQS+YQ ++ +
Sbjct: 813 NLIMDTLGALALSTEPPSEELFNRRPYGRFDSLITYRMWRNIIGQSIYQIAFLFSIMYSA 872
Query: 912 KAVFRL-DGPDPD-------LILNTLIFNTFVFCQ 938
++ L D P D + +T+IFNTFVFCQ
Sbjct: 873 ASMVELFDLPRVDQWTTNDKTVYHTIIFNTFVFCQ 907
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O34431 | ATCL_BACSU | 3, ., 6, ., 3, ., 8 | 0.3187 | 0.8094 | 0.8640 | yes | no |
| Q6ATV4 | ACA2_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7265 | 0.9305 | 0.8557 | no | no |
| Q2QMX9 | ACA1_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7944 | 0.9884 | 0.9205 | yes | no |
| O81108 | ACA2_ARATH | 3, ., 6, ., 3, ., 8 | 0.7957 | 0.9947 | 0.9319 | no | no |
| Q37145 | ACA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8296 | 0.9884 | 0.9205 | yes | no |
| O64806 | ACA7_ARATH | 3, ., 6, ., 3, ., 8 | 0.7844 | 0.9947 | 0.9310 | no | no |
| P37278 | ATCL_SYNE7 | 3, ., 6, ., 3, ., 8 | 0.3163 | 0.8042 | 0.8250 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 950 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-135 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-128 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-120 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-102 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-69 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 7e-67 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 9e-62 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-56 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 4e-55 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-51 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 8e-42 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-31 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-30 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-27 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-27 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-27 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 4e-27 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-23 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-22 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 6e-22 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-21 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-20 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 2e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-17 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 4e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 5e-16 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-12 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-09 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-08 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 7e-08 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-07 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 8e-07 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 5e-05 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 7e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 5e-04 | |
| COG4069 | 367 | COG4069, COG4069, Uncharacterized protein conserve | 0.003 | |
| TIGR01487 | 215 | TIGR01487, Pglycolate_arch, phosphoglycolate phosp | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1057 bits (2735), Expect = 0.0
Identities = 437/857 (50%), Positives = 583/857 (68%), Gaps = 27/857 (3%)
Query: 101 DELGSIVEG--HDIKKLKVH-----GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGIN 153
++G + DI K + GG EGIA KL T + +G+ S L RR+++YG N
Sbjct: 18 FDVGVSILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKN 77
Query: 154 KFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGI-----ATEGWPKGAHDGLGIVM 208
+ E P + F VW AL D TL++L+V A+VSLV+G+ G +G+ I++
Sbjct: 78 ELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILV 137
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268
S++LVV VTA +DYK+ LQF+ L+REK + V R G ++ISI+D++ GDIV L GD
Sbjct: 138 SVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD 197
Query: 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRT 327
VPADG+F+SG S+ I+ESS+TGES+P+ + +PFLLSGT V GS +MLVT VG+ +
Sbjct: 198 VVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNS 257
Query: 328 QWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW 387
GKLM L + G+D TPLQ KL+ +A +IGK G+ AV+ F V+ R ++
Sbjct: 258 FGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD 317
Query: 388 TWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETM 447
T +DA L+ F IAVTIVVVAVPEGLPLAVT++LA++MKKMM D LVRHLAACETM
Sbjct: 318 T--EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETM 375
Query: 448 GSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFN 507
GSAT+ICSDKTGTLT N M+V++ I E+ V + ++P +L++ I
Sbjct: 376 GSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD------VLRNVPKHVRNILVEGISL 429
Query: 508 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 567
N+ E V+ G K +G+ TE A+L+FGLLL D+Q R K+VK+ PFNS +K M V
Sbjct: 430 NSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSV 489
Query: 568 VIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 627
V++ G +R KGASEI+L C K L+SNGE P+++ + + IE AS+ALRT+
Sbjct: 490 VVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTI 549
Query: 628 CLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
CLA + E P +G T IG+VGIKDP+RPGV+E+V C+ AGITVRMVTGDNI
Sbjct: 550 CLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 609
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
+TAKAIAR CGILT G+A+EG EFR EE+ ++PK++V+ARSSP+DK LV L+
Sbjct: 610 DTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLK- 668
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807
+GEVVAVTGDGTNDAPAL AD+G +MGI+GTEVAKE++D+I+LDDNF++IV KWGR
Sbjct: 669 DMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGR 728
Query: 808 SVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEP 867
+VY NI+KF+QFQLTVNVVA+I+ F +C++ +PLTAVQLLWVN+IMDTL ALALATEP
Sbjct: 729 NVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEP 788
Query: 868 PNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD-----P 922
P L+ R P+GR IS MW+NILGQ+ YQ ++ + L G ++F + GPD
Sbjct: 789 PTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQ 848
Query: 923 DLILNTLIFNTFVFCQV 939
LNT++FNTFV Q+
Sbjct: 849 QGELNTIVFNTFVLLQL 865
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 611 bits (1578), Expect = 0.0
Identities = 304/847 (35%), Positives = 436/847 (51%), Gaps = 62/847 (7%)
Query: 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCA 183
+ +L TS T G+S E + RR + YG N+ E R D +++L V A
Sbjct: 33 LLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 184 LVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243
L+S VG W D + I++ +++ + +Y+ + L ++ +V
Sbjct: 91 LLSAFVGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL-KKMSSPKAKVL 145
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-- 301
R+G +I +L+PGDIV L GD VPAD + + ++ES+LTGES PV AL
Sbjct: 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPL 205
Query: 302 -----------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
+ L SGT V +G K +V G T++GK+ L + +TPLQ KL
Sbjct: 206 TKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
N + + + L + F V GLF G+ LE A+ + V
Sbjct: 266 NKLGKFLLVLALVLGALVFVV---GLFRG-----------GNGLLESFLT---ALALAVA 308
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK 470
AVPEGLP VT++LA ++M D A+VR L A ET+GS ICSDKTGTLT N MTV K
Sbjct: 309 AVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368
Query: 471 ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTET 530
I K++D+ + + LL + N+ V E N G PTE
Sbjct: 369 IYINGGGKDIDDKDLKD------SPALLRFLLAAALCNS----VTPEKNGWYQAGDPTEG 418
Query: 531 AILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588
A++EF LG D I+ PF+S +K+M V+++ EG + + KGA E+IL
Sbjct: 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478
Query: 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIPTE 647
C S GE+ PL E + L E +++ ASE LR L +A ++ E +
Sbjct: 479 ERCK----SIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIES 534
Query: 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGI 705
+G+ GI+DP R VKE++ R AGI V M+TGD++ TA AIA+ECGI + + +
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESAL 594
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
I+G E SDEEL++L+ ++ V AR SP K +V+ L+ G VVA+TGDG NDAPA
Sbjct: 595 VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPA 653
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
L AD+G+AMG GT+ AKE+AD+++LDDNF+TIV GR VY+NI+KF+ + L+ NV
Sbjct: 654 LKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713
Query: 826 VA-LIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884
L + S PLT +QLLW+N++ D+L ALAL E P D+MKR P G +
Sbjct: 714 GEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGL 773
Query: 885 ISN-VMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLI---LNTLIFNTFVFCQVC 940
+ + WR IL L ++ F + DL L T F V Q+
Sbjct: 774 FNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLL 833
Query: 941 LSTCIRS 947
L+ +RS
Sbjct: 834 LTLAVRS 840
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 428 bits (1101), Expect = e-135
Identities = 263/850 (30%), Positives = 429/850 (50%), Gaps = 94/850 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWV-YVWEALHDMTLMIL 179
VE KL T + +G+++S+ +RR +G N+F W ++ + + + +++L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQEASHRRA-FHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
A++S+ +G D + I ++IL+VV V +Y+ + L++
Sbjct: 68 IASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPP-E 118
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN-- 297
+ R G + L+PGD+V L +GD+VPAD V + I+ES+LTGE+ PV+
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 298 ---VNALNPFLLS--------GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346
+ A L+ GT V+ G K +V G T++G + + +TPL
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238
Query: 347 QVKLNGVATIIGKIGLFFAVVTFAV----MVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
Q ++ +G ++V+F V + G F +G W LE F
Sbjct: 239 QKSMD-------LLGKQLSLVSFGVIGVICLVGWF-----QGKDW----------LEMFT 276
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
I+V++ V A+PEGLP+ VT++LA + +M +A+VR L + ET+GS ICSDKTGTLT
Sbjct: 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLT 336
Query: 463 TNHMTVLKACICEEIKEVDNSKGTPAFGSSI-----------PASASKLLLQSIFNNTGG 511
NHMTV K + + + N+ FG I A + L ++ NN
Sbjct: 337 KNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA-- 394
Query: 512 EVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571
+LG PT+ A++E + G R+ V PF+S +K M V
Sbjct: 395 ---KFRNEADTLLGNPTDVALIELLMKFG--LDDLRETYIRVAEVPFSSERKWMAVKCVH 449
Query: 572 PEGGFR-VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
+ KGA E +L C + +G+ + L + + + E + AS LR + A
Sbjct: 450 RQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA 509
Query: 631 CMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTA 690
+ T +G+VGI DP RPGVKE+V + G+ + M+TGD+ TA
Sbjct: 510 SGPEKGQL-----------TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETA 558
Query: 691 KAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750
+IAR G+ + ++ G + D++LS+++PK+ V AR+SP K +VK L+ G
Sbjct: 559 VSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQK-RG 617
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
+VVA+TGDG NDAPAL ADIG+AMG GT+VAKE+AD+I+ DD+F+TI++ + G+ ++
Sbjct: 618 DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIF 677
Query: 811 INIQKFVQFQLTVNVVAL-IVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPN 869
NI+ F+ FQL+ +V AL ++ ++ N PL A+Q+LW+N++MD A +L EP +
Sbjct: 678 NNIKNFITFQLSTSVAALSLIALATLMGFPN-PLNAMQILWINILMDGPPAQSLGVEPVD 736
Query: 870 GDLMKRSPVGRKGNFISNVMWRNILGQS---LYQFLIIWYLQTRGKAVFRLDGPDPDLIL 926
D+M++ P R ++ + + IL + + L ++ + + + D
Sbjct: 737 KDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARD-------- 788
Query: 927 NTLIFNTFVF 936
T+ F FVF
Sbjct: 789 TTMTFTCFVF 798
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 409 bits (1054), Expect = e-128
Identities = 256/793 (32%), Positives = 374/793 (47%), Gaps = 101/793 (12%)
Query: 167 VWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIV--MSILLVVFVTATSDYKQ 224
V E D+ + IL + A VS V+ EG V ILL++ A Q
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEG----EETVTAFVEPFVILLILVANAIVGVWQ 56
Query: 225 SL-------QFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277
K+ + E K V R+G I DL+PGDIV L +GD+VPAD +
Sbjct: 57 ERNAEKAIEALKEYESEHAK----VLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112
Query: 278 SGFSVLINESSLTGESEPVNV--------NALNP----FLLSGTKVQNGSCKMLVTTVGM 325
S ++ +++S LTGES VN A+N L SGT V G + +V GM
Sbjct: 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGM 172
Query: 326 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385
T+ GK+ + ++TPLQ KL+ ++ K+ ++ + + + L G
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACE 445
+ +F IAV + V A+PEGLP +T LA +KM A+VR L + E
Sbjct: 233 --------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVE 284
Query: 446 TMGSATSICSDKTGTLTTNHMTVLKACICE----EIKE--VDNSKGTPAFGS----SIPA 495
T+G T ICSDKTGTLTTN M+V K + + E V + P G A
Sbjct: 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVA 344
Query: 496 SASKLLL-------------QSIFNNTGGEVVIGEGNKTEILGTPTETAIL-------EF 535
L FN G E +G TE A+
Sbjct: 345 GGQDAGLEELATIAALCNDSSLDFNERKGVY--------EKVGEATEAALKVLVEKMGLP 396
Query: 536 GLLLGGDFQAERQ----------ASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585
G + K+ +E F+ +K M V+ + P G ++ KGA E
Sbjct: 397 ATKNGVSSKRRPALGCNSVWNDKFKKLATLE-FSRDRKSMSVLCK-PSTGNKLFVKGAPE 454
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFSADAPI 644
+L C LN +G VPL + N + I++ + +ALR L LA +I + D
Sbjct: 455 GVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLS 514
Query: 645 PTEGY-------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697
+ T IG+VG+ DP RP V +++ CR+AGI V M+TGDN TA+AI R
Sbjct: 515 DPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI 574
Query: 698 GILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVV 753
GI + + + G EF E + + +R P K LV+ L+ GE+V
Sbjct: 575 GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE-QGEIV 633
Query: 754 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
A+TGDG NDAPAL +ADIG+AMG +GTEVAKE++D+++ DDNF+TIV + GR++Y N+
Sbjct: 634 AMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNM 692
Query: 814 QKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLM 873
++F+++ ++ N+ ++ F +A L L VQLLWVN++ D L A AL PP+ D+M
Sbjct: 693 KQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIM 752
Query: 874 KRSPVGRKGNFIS 886
+ P I+
Sbjct: 753 WKPPRRPDEPLIT 765
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 375 bits (966), Expect = e-120
Identities = 199/668 (29%), Positives = 303/668 (45%), Gaps = 140/668 (20%)
Query: 206 IVMSILLVVFVT-ATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHL 264
+++ +LLVV D +SL DR V RNG ++I DL+PGD+V +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLS----DRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF---------LLSGTKVQNGS 315
G+ VPADG+ +SG S ++ES+LTGES PV AL + +GT V G+
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 316 CKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 375
++VT G+ T G++ + G + TPLQ K + + I + L + + +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFI 179
Query: 376 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 435
D I + A+ ++V+ VP LP AVT++LA ++
Sbjct: 180 RGW--------------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKG 225
Query: 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPA 495
LVR+L A E +G +CSDKTGTLT N MT+ I + +
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG-----GKEDNSSSL------ 274
Query: 496 SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKV 555
V + N + G P E A+L+ L+G + KI+ V
Sbjct: 275 ------------------VACDNN--YLSGDPMEKALLKSAELVGKAD-KGNKEYKILDV 313
Query: 556 EPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
PF+SV K+M V++E P+G + KGA E IL C N+ E
Sbjct: 314 FPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC------------------NNYEEK 355
Query: 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675
+ A + LR L A + + +G++ +DP+RP KE++ ++A
Sbjct: 356 YLELARQGLRVLAFA----------SKELEDD-LEFLGLITFEDPLRPDAKETIEELKAA 404
Query: 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735
GI V M+TGDN+ TAKAIA+E GI V AR SP
Sbjct: 405 GIKVVMITGDNVLTAKAIAKELGID----------------------------VFARVSP 436
Query: 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
K +V+ L+ G +VA+TGDG NDAPAL +AD+G+AMG AK +AD+++LDD+
Sbjct: 437 EQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDD 489
Query: 796 FSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIM 855
S IV K GR ++ NI+ + + + N++ + + + +++
Sbjct: 490 LSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV--------------IILLL 535
Query: 856 DTLGALAL 863
L ALAL
Sbjct: 536 PMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-102
Identities = 255/821 (31%), Positives = 400/821 (48%), Gaps = 96/821 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIY---GINKFTESPARGFWVYVWEALHDMTLM 177
++ + K T ++ G+S + R EI G N T P WV L M
Sbjct: 22 LDELERKYGTDLSKGLSAA-----RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSM 76
Query: 178 ILAVCALVSLVV-GI--ATEGWPKGAHDGLGIVMSILLVVFVTAT-SDYKQSLQFKDLDR 233
+L + A++ + GI +TE P+ + LG+V+S VV +T S Y+++ K ++
Sbjct: 77 LLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLS--AVVIITGCFSYYQEAKSSKIMES 134
Query: 234 EKKKITVQ--VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTG 291
K + Q V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLTG
Sbjct: 135 FKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTG 194
Query: 292 ESEP-------VNVNAL---NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-G 340
ESEP + N L N S V+ G+ + +V G RT G++ A+L+ G
Sbjct: 195 ESEPQTRSPEFTHENPLETRNIAFFSTNCVE-GTARGIVVNTGDRTVMGRI-ASLASGLE 252
Query: 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
+ +TP+ +++ II + +F V F + L G W LE + F
Sbjct: 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFIL--------SLILGYTW-------LEAVIF 297
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGT
Sbjct: 298 L---IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 354
Query: 461 LTTNHMTVLKACICEEIKEVDNSKGTP--AFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518
LT N MTV +I E D ++ +F S + + + N G+
Sbjct: 355 LTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNR--AVFKAGQE 412
Query: 519 N----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEG 574
N K + G +E+A+L+ L G R+ + V PFNS K + E +
Sbjct: 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDP 472
Query: 575 GFRVHC---KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
H KGA E IL C L +G+ PL+E + R L
Sbjct: 473 RDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCH 531
Query: 632 MEI-------GNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G +F D PT+ +G++ + DP R V ++V CRSAGI V MVT
Sbjct: 532 LYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591
Query: 684 GDNINTAKAIARECGILTDNG-----IA-------------------IEGPEFREKSDEE 719
GD+ TAKAIA+ GI+++ IA + G + ++ + E+
Sbjct: 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ 651
Query: 720 LSKLI---PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
L +++ +I V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMG
Sbjct: 652 LDEILKYHTEI-VFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 777 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836
IAG++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ +
Sbjct: 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFII 769
Query: 837 LTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSP 877
PL + +L +++ D + A++LA E D+MKR P
Sbjct: 770 ANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 3e-69
Identities = 203/769 (26%), Positives = 336/769 (43%), Gaps = 108/769 (14%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
G E + KL T G++ E + R +G N+ E + A ++ +
Sbjct: 17 QMGKETLLRKLGVHET-GLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIY 73
Query: 178 ILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKK 237
ILA+ VS + D L + I L+V + + Q + + K
Sbjct: 74 ILAMLMGVSYLT------------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKN 121
Query: 238 I---TVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288
+ T V R NG ++ I L+PGD++ L GD +PAD +S + IN+S+
Sbjct: 122 MVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSA 181
Query: 289 LTGESEPV-------NVNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
LTGES PV GT V +G + +V G T +G L
Sbjct: 182 LTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA 241
Query: 337 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 396
+E T + V+ ++ + L V M+ GL W
Sbjct: 242 TERRGQ-TAFDKGVKSVSKLLIRFMLVMVPVVL--MINGL--------MKGDW------- 283
Query: 397 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSD 456
LE F A+ + V PE LP+ V+ +LA M K +V+ L+A + G+ +C+D
Sbjct: 284 -LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTD 342
Query: 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN---TGGEV 513
KTGTLT + + E K +D+S G + ++L + N+ TG +
Sbjct: 343 KTGTLTQDKI--------ELEKHIDSS-GETS---------ERVLKMAWLNSYFQTGWKN 384
Query: 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIE 570
V+ + A+L D A RQ AS+ KV+ PF+ ++++ VV+E
Sbjct: 385 VL-------------DHAVLAKL-----DESAARQTASRWKKVDEIPFDFDRRRLSVVVE 426
Query: 571 LPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
R+ CKGA E +L C G VV L+E+ + L + + + +R + +A
Sbjct: 427 NRAEVTRLICKGAVEEMLTVCTH-KRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 631 CMEI---GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
+ +F+ E G +G DP + KE++A GI V+++TGDN
Sbjct: 486 TKTLKVGEADFTK---TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
I +E GI D + G + E SDEEL++ + K + AR +PM K ++ L+
Sbjct: 543 IVTARICQEVGI--DANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKK 600
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807
G V GDG NDAPAL +AD+G+++ A ++AKE++D+I+L+ + + GR
Sbjct: 601 A-GHTVGFLGDGINDAPALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGR 658
Query: 808 SVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMD 856
+ + NI K+++ + N + ++ P+ ++ LL N++ D
Sbjct: 659 NTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 7e-67
Identities = 191/723 (26%), Positives = 320/723 (44%), Gaps = 125/723 (17%)
Query: 135 GISTSEHLLNRRKEIYGINKFTE---SPARGFWVYVWEALHDMTLMILAVCALVSLVVGI 191
G++++E +R YG N+ E SP F + W L + + A+++ I
Sbjct: 1 GLTSAE--AKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWV----MEAAAIIA----I 50
Query: 192 ATEGWPKGAHDGLGIVMSILL---VVFV------TATSDYKQSLQFKDLDREKKKITVQV 242
A E W D + I+ +LL + F+ A KQSL K +V
Sbjct: 51 ALENWV----DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPK----------ARV 96
Query: 243 ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-L 301
R+G ++I +L+PGD+V L +GD VPAD G + +++++LTGES PV
Sbjct: 97 LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGD 156
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
+ SG+ V+ G + +VT GM T +GK A + LQ I+ KIG
Sbjct: 157 IAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQK-------ILSKIG 207
Query: 362 LF---FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
LF V + + LF + G+ E L+F A+ ++V +P +P
Sbjct: 208 LFLIVLIGVLVLIELVVLFFGR----------GESFREGLQF---ALVLLVGGIPIAMPA 254
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
+++++A ++ KA+V L A E + +CSDKTGTLT N +++ +
Sbjct: 255 VLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF 314
Query: 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL 538
+ D+ A S E +TA+L G
Sbjct: 315 DKDDVLLYAALASRE-----------------------EDQD------AIDTAVL--GSA 343
Query: 539 LGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC-KGASEIILAACDKFLNS 597
D + R K+++ PF+ V K+ +E PE G R KGA ++IL CD
Sbjct: 344 K--DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCD----- 396
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 657
+ E + E +++ AS R L +A D + +G++ +
Sbjct: 397 --NKKEIEEK----VEEKVDELASRGYRALGVA--------RTDEE---GRWHFLGLLPL 439
Query: 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREK 715
DP R KE++ R G+ V+MVTGD++ AK AR G+ T+ + + R+
Sbjct: 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDD 499
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775
L +++ A P K+ +V+ L+ G +V +TGDG NDAPAL +AD+G+A
Sbjct: 500 LPSGLGEMVEDADGFAEVFPEHKYEIVEILQ-KRGHLVGMTGDGVNDAPALKKADVGIA- 557
Query: 776 GIAG-TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834
+AG T+ A+ +AD+++ + S IV R ++ ++ +V +++ + ++ F
Sbjct: 558 -VAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAET-IRIVFFFGL 615
Query: 835 ACL 837
L
Sbjct: 616 LIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 9e-62
Identities = 188/713 (26%), Positives = 319/713 (44%), Gaps = 100/713 (14%)
Query: 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIA 192
+G++ +E + +E +G N+ +WV++W + ++L + +S A
Sbjct: 65 PEGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISY----A 118
Query: 193 TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKI--TVQVARNG---- 246
TE L + +S LL A S K D K + T V R
Sbjct: 119 TEDLFAAGVIALMVAISTLLNFIQEARST-------KAADALKAMVSNTATVLRVINDKG 171
Query: 247 --FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV-------N 297
+I I L+PGDI+ L GD +PAD + + + ++SLTGES PV
Sbjct: 172 ENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQ 231
Query: 298 VNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
NP GT V +G+ + +V G T +G+L +SE + Q ++
Sbjct: 232 PEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISR 291
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
V+ ++ + F V+ V++ +T+ G W E A+++ V
Sbjct: 292 VSWLLIR---FMLVMAPVVLLINGYTK----GDWW-----------EAALFALSVAVGLT 333
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PE LP+ VT +LA K+ K +V+ L A + G+ +C+DKTGTLT + + VL
Sbjct: 334 PEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKI-VL--- 389
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN----TGGEVVIGEGNKTEILGTPT 528
T G + S+ +L S + N TG L
Sbjct: 390 ----------ENHTDISGKT-----SERVLHSAWLNSHYQTG-------------LKNLL 421
Query: 529 ETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCKGASE 585
+TA+LE G D ++ R AS+ K++ PF+ +++M VV+ ++ CKGA E
Sbjct: 422 DTAVLE-----GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALE 476
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIP 645
IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 477 EILNVCSQ-VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRAD 535
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
G + DP + ++ +++G+TV+++TGD+ A + E G+ D G
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAGE 593
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
+ G + SD+EL+ L + + AR +PM K +V L+ G VV GDG NDAPA
Sbjct: 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPA 652
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQ 818
L ADIG+++ ++A+E+AD+I+L+ + + GR + N+ K+++
Sbjct: 653 LRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIK 704
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 209 bits (533), Expect = 5e-56
Identities = 207/782 (26%), Positives = 346/782 (44%), Gaps = 127/782 (16%)
Query: 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186
L+T G++ + R + YG N+ V + +A ++ + +L V A +S
Sbjct: 38 NLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAIS 94
Query: 187 LVVGIATEGW---PKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-------FKDLDREKK 236
T+ W +G L V+ IL +V ++ + Q + K + R
Sbjct: 95 FF----TDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR--T 148
Query: 237 KITVQ----VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
TV RR+I + +L+PGDIVHL GD +PAD + + I+++ LTGE
Sbjct: 149 TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGE 208
Query: 293 SEPV----------------------NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330
+ PV ++ L GT V +G+ +V G RT +G
Sbjct: 209 ALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFG 268
Query: 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS 390
L ++ G +T +N V+ ++ I +V +++ G T W
Sbjct: 269 SLAKSIV-GTRAQTAFDRGVNSVSWLL--IRFMLVMVPVVLLINGF--------TKGDWL 317
Query: 391 GDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSA 450
+AL FA+AV V PE LP+ V+ +LA M K +V+ L A + G+
Sbjct: 318 --EAL----LFALAVA--VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 451 TSICSDKTGTLTTN-----HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505
+C+DKTGTLT + H + E + ++ A+ +S S K L+
Sbjct: 370 DVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQL-------AWLNSFHQSGMKNLM--- 419
Query: 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM 565
+ A++ F + K+ ++ PF+ V++++
Sbjct: 420 -----------------------DQAVVAFAEGNP-EIVKPAGYRKVDEL-PFDFVRRRL 454
Query: 566 GVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALR 625
VV+E +G + CKGA E +LA + V PL+EA L E + ++ R
Sbjct: 455 SVVVEDAQGQHLLICKGAVEEMLAVATH-VRDGDTVRPLDEARRERLLALAEAYNADGFR 513
Query: 626 TLCLACMEIGNEFSADAPIPTE---GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 682
L +A EI + A T G + DP + ++A R G+ V+++
Sbjct: 514 VLLVATREIPGG-ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVL 572
Query: 683 TGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741
TGDN I TAK I RE G+ + G + G E D L++ + + V A+ +P+ K +
Sbjct: 573 TGDNPIVTAK-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRV 629
Query: 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801
+K L+ G V GDG NDAPAL +AD+G+++ +G ++AKESAD+I+L+ + +
Sbjct: 630 LKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEE 687
Query: 802 -VAKWGRSVYINIQKFVQFQLTV-----NVVALIVNFSSACLTGNAPLTAVQLLWVNMIM 855
V K GR + NI K++ +T NV +++V +SA + P+ A+ LL N++
Sbjct: 688 GVIK-GRETFGNIIKYL--NMTASSNFGNVFSVLV--ASAFIPF-LPMLAIHLLLQNLMY 741
Query: 856 DT 857
D
Sbjct: 742 DI 743
|
Length = 903 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 4e-55
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+L+ + A +Y+ K L + V R+G +I +L+ GDIV L GD+
Sbjct: 6 VLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLKPGDR 65
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQW 329
VPADG + G S+ ++ES+LTGES PV + + +GT V +G K++VT G T+
Sbjct: 66 VPADGRIIEG-SLEVDESALTGESLPVEKSR-GDTVFAGTVVLSGELKVIVTATGEDTEL 123
Query: 330 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389
GK+ + E +TPLQ L+ +A I+ I L A++ F + +
Sbjct: 124 GKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLI--------------WFFR 169
Query: 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446
GD LE A+ ++V A PE LPLAV L+LA ++ LV++L+A ET
Sbjct: 170 GGD----FLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 1e-51
Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 31/349 (8%)
Query: 557 PFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNE 614
PF+S K+M + E G + ++ KGA E I+ C +G ++ PL + +
Sbjct: 532 PFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIA 591
Query: 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTE---------GYTCIGIVGIKDPMRPGV 665
+E A+E LR L A + D + E +G++GI DP R
Sbjct: 592 NMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNES 651
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----------IEGPEFREK 715
+V C AGI V M+TGD TAKAIA+E GI+ N I + G +F
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL 711
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVK--HLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
SDEE+ L V+AR +P K +++ H R A+TGDG ND+P+L A++G+
Sbjct: 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAF---CAMTGDGVNDSPSLKMANVGI 768
Query: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV---VALIV 830
AMGI G++VAK+++D+++ DDNF++I+ + GR ++ NI KFV L NV + LI+
Sbjct: 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828
Query: 831 NFSSACLTGNA--PLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSP 877
+ G + PL+ V++LW MI A+ L E DLM R P
Sbjct: 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 8e-42
Identities = 195/904 (21%), Positives = 328/904 (36%), Gaps = 213/904 (23%)
Query: 129 STSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVW-EALHDMTLMILAVCALVSL 187
++G++T + +RK YG N+ E P F + E LH V + S+
Sbjct: 133 CAGHSNGLTTGDI--AQRKAKYGKNEI-EIPVPSFLELLKEEVLHP-----FYVFQVFSV 184
Query: 188 VVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF 247
++ + E + SI L V+ KQ + +D+ K +V V RNG
Sbjct: 185 ILWLLDEYYYYSLCIVFMSSTSISLSVY----QIRKQMQRLRDM--VHKPQSVIVIRNGK 238
Query: 248 RRKISIYDLLPGDIVHLCMGDQ--VPADGLFVSGFSVLINESSLTGESEPVNVNAL---- 301
I+ +L+PGDIV + ++ +P D + +SG S ++NES LTGES PV +
Sbjct: 239 WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNG 297
Query: 302 -------------NPFLLSGTKV-------QNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
L GTK+ + C +V G T G+L+ ++
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFA-VMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
P K + A++ F +++ + D + +
Sbjct: 356 --KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI---------------KDGRPLGKI 398
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC------ETMGSATSIC 454
++ I+ + VP LP +++ + ++ L + C G C
Sbjct: 399 ILRSLDIITIVVPPALPAELSIGINNSLA------RLKKKGIFCTSPFRINFAGKIDVCC 452
Query: 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVV 514
DKTGTLT + + + +E K S P+ K L T +
Sbjct: 453 FDKTGTLTEDGLDLRGVQGLSGNQEFL--KIVTEDSSLKPSITHKALA------TCHSLT 504
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQAS------------------KIVKVE 556
EG ++G P + + E G + + +++ I++
Sbjct: 505 KLEGK---LVGDPLDKKMFEA---TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558
Query: 557 PFNSVKKQMGVVIELPEGGFRV-HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
F+S ++M V++ + KGA E I + C E VP + E
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP------ETVPSDYQ------EV 606
Query: 616 IEKFASEALRTLCLACMEIGN-EFSADAPIPTEGYTC----IGIVGIKDPMRPGVKESVA 670
++ + E R L LA E+ + + +G + ++P++P KE +
Sbjct: 607 LKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIK 666
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECG-------------------------------- 698
+ A I M+TGDN TA +ARECG
Sbjct: 667 ELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726
Query: 699 ---------------------ILTDNGIAIEGPEFR---EKSDEELSKLIPKIQVMARSS 734
+ + +A+ G F S E L +L+ V AR +
Sbjct: 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMA 786
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794
P K TLV+ L+ L V + GDG ND AL +AD+G+++ A VA A
Sbjct: 787 PDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEASVA---APFTSKLA 842
Query: 795 NFSTIVTVAKWGRSVYIN-IQKF--------VQFQLTVNVVALI-VNFSSACLTGNAPLT 844
+ S + V + GR + Q F +QF +V+++ LI N
Sbjct: 843 SISCVPNVIREGRCALVTSFQMFKYMALYSLIQF-YSVSILYLIGSNLGD---------- 891
Query: 845 AVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLII 904
Q L +++++ AL ++ P L K P SN+ IL L QF++
Sbjct: 892 -GQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP-------SNLFSVYILTSVLIQFVLH 943
Query: 905 WYLQ 908
Q
Sbjct: 944 ILSQ 947
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 9e-31
Identities = 147/621 (23%), Positives = 260/621 (41%), Gaps = 116/621 (18%)
Query: 208 MSILLVVFVTATSDYKQSLQFKDLDREKKK-ITVQVARNGFRRKISIYDLLPGDIVHLCM 266
+++L F A ++ + Q L KK + +G K+ L GDIV +
Sbjct: 75 ITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEA 134
Query: 267 GDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVG 324
GD +P DG + G + ++ES++TGES PV + F + GT++ + + T
Sbjct: 135 GDVIPCDGEVIEGVAS-VDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANP 193
Query: 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384
T +++A + +TP ++ L ++ + L F +VT + +
Sbjct: 194 GETFLDRMIALVEGAQRRKTPNEIALT---ILLIALTLVFLLVTATLWPFAAY------- 243
Query: 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC 444
G +A+ + A+ V ++ + GL A+ ++ M +++ + A
Sbjct: 244 ------GGNAISVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVLGFNVIATSGRAV 293
Query: 445 ETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504
E G ++ DKTGT+T + S+ PA G A L S
Sbjct: 294 EACGDVDTLLLDKTGTITLGNRLA--------------SEFIPAQGVDEKTLADAAQLAS 339
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
+ ++T P +I+ LG + + S F + +
Sbjct: 340 LADDT-----------------PEGKSIVILAKQLG--IREDDVQSLHATFVEFTAQTRM 380
Query: 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEAL 624
G+ ++ R+ KGA + I + + +NG +P + L++ +++ A +
Sbjct: 381 SGINLD----NGRMIRKGAVDAI----KRHVEANGGHIPTD------LDQAVDQVARQGG 426
Query: 625 RTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
L + N G++ +KD ++ G+KE A R GI M+TG
Sbjct: 427 TPLVVC---EDNRI-------------YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470
Query: 685 DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744
DN TA AIA E G+ D+ IA PE DK L++
Sbjct: 471 DNRLTAAAIAAEAGV--DDFIAEATPE-------------------------DKIALIRQ 503
Query: 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804
+ G++VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+A+++ LD + + ++ V
Sbjct: 504 EQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561
Query: 805 WGRSVYINIQKFVQFQLTVNV 825
G+ + I F + +V
Sbjct: 562 IGKQLLITRGALTTFSIANDV 582
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 2e-30
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 29/180 (16%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + D +RP KE++A ++ GI V M+TGDN TA+AIA+E GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
DE V A P DK +V+ L+ G VA+ GDG NDAPAL AD+
Sbjct: 577 -----DE----------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADV 620
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVN 831
G+AMG +GT+VA E+ADV+++ D+ S + R+ I++ + + N +A+ +
Sbjct: 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679
|
Length = 713 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-27
Identities = 96/392 (24%), Positives = 156/392 (39%), Gaps = 82/392 (20%)
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AE + TSI +G+ T + +R KE G N+ + + + M+L +
Sbjct: 16 AEFIGTSIPEGL-THDEAQHRLKE-VGENRLEADSGIDAKAMLLHQVCNAMCMVL----I 69
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQFKDLDREKKKITVQVA 243
++ + A W +G G++ +I+ + + + +YK L + V
Sbjct: 70 IAAAISFAMHDWIEG-----GVISAIIALNILIGFIQEYKAEKTMDSL-KNLASPMAHVI 123
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP 303
RNG I +DL+PGDI L GD +PAD + + +E+ LTGES PV +A
Sbjct: 124 RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHAT 183
Query: 304 F--------------LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG-------DD 342
F S + V G K + + ++ G + A L G D
Sbjct: 184 FGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKD 243
Query: 343 E----------------------------TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374
+ TPL KL+ +A I+ I + FA++ VM
Sbjct: 244 DPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAII---VMAA 300
Query: 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMND 434
F D + + +AI + I + +PE L +++++A M
Sbjct: 301 HKF---------------DVDKEVAIYAICLAISI--IPESLIAVLSITMAMGAANMSKR 343
Query: 435 KALVRHLAACETMGSATSICSDKTGTLTTNHM 466
+VR L A E +G+ ICSDKTGT+T M
Sbjct: 344 NVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 2e-27
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 35/196 (17%)
Query: 652 IGIVGIKDPMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G++ ++D +RP KE++A + R+ GI + M+TGDN + A+A+A E GI
Sbjct: 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------- 425
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK L+ G VVA+ GDG NDAPAL AD
Sbjct: 426 -----------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAAD 467
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830
+G+AMG AG++VA E+AD+++L+D+ S++ T R I++ + + L N+VA+ +
Sbjct: 468 VGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526
Query: 831 NFSSACLTGNAPLTAV 846
G PL +
Sbjct: 527 A-----AGGLLPLWLL 537
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 4e-27
Identities = 150/565 (26%), Positives = 239/565 (42%), Gaps = 125/565 (22%)
Query: 255 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQ 312
+L GDIV + G+ +P+DG + G ++ES++TGES PV + F + GT+V
Sbjct: 122 ELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVL 180
Query: 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDE-TPLQVKLN---GVATIIGKIGLFFAVVT 368
+ K+ +T T + M L EG + + TP ++ L T+I AV T
Sbjct: 181 SDWLKIRITANPGETFLDR-MIALVEGAERQKTPNEIALTILLSGLTLI----FLLAVAT 235
Query: 369 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
+SG A + A+ V ++ + GL A+ ++ M
Sbjct: 236 LYPFAI--------------YSGGGAASVTVLVALLVCLIPTTI-GGLLSAIGIA---GM 277
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTT-NHMTVLKACICEEIKEVDNSKGTP 487
++ + A E G ++ DKTGT+T N S+ P
Sbjct: 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA---------------SEFIP 322
Query: 488 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAER 547
G S A L S+ + T P +I+E LG + + +
Sbjct: 323 VPGVSEEELADAAQLASLADET-----------------PEGRSIVELAKKLGIELREDD 365
Query: 548 QASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 607
S V PF + + G ++LP G R KGA + I +++ G +P
Sbjct: 366 LQSHAEFV-PFTAQTRMSG--VDLPGG--REIRKGAVDAIR----RYVRERGGHIP---- 412
Query: 608 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT-EGYTCIGIVGIKDPMRPGVK 666
E L A E+ P+ E +G++ +KD ++PG+K
Sbjct: 413 --------------EDLDA---AVDEVSR--LGGTPLVVVENGRILGVIYLKDIVKPGIK 453
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E A R GI M+TGDN TA AIA E G+ D+
Sbjct: 454 ERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----------------DD-------- 488
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
+A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+
Sbjct: 489 --FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEA 544
Query: 787 ADVIILDDNFSTIVTVAKWGRSVYI 811
A+++ LD N + ++ V + G+ + I
Sbjct: 545 ANMVDLDSNPTKLIEVVEIGKQLLI 569
|
Length = 681 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 4e-27
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 842 PLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 901
PLT +Q+LW+N++ D L ALAL EPP DLMKR P K S + R IL Q L
Sbjct: 3 PLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIA 62
Query: 902 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRS 947
++ + G + T+ FNT V Q+ + RS
Sbjct: 63 IVTLLVFF---LGLLGFGISESGLAQTMAFNTLVLSQLFNALNARS 105
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-26
Identities = 139/621 (22%), Positives = 224/621 (36%), Gaps = 167/621 (26%)
Query: 431 MMNDK----ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI------------- 473
M ++K A VR E +G I SDKTGTLT N M K I
Sbjct: 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395
Query: 474 ------------CEEIKEVDNSKGTPAF--------GSSIPASASKLLLQS--------- 504
E V++ T + A +
Sbjct: 396 DGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF--------------QAERQAS 550
FN+ G E + + +P E A+++ +G F E +
Sbjct: 456 EFNDDGPEEITYQAA------SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509
Query: 551 KIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVN 610
+I+ V FNS +K+M V++ P+G ++ CKGA +I K L+S G V NE
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF----KRLSSGGNQV--NEETKE 563
Query: 611 HLNETIEKFASEALRTLCLACMEIG-NEF---------------------SADAPIPTEG 648
HL E +ASE LRTLC+A E+ E+ A +
Sbjct: 564 HL----ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 704
+G I+D ++ GV E++ + R AGI + ++TGD + TA I C +L+ N
Sbjct: 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIV 679
Query: 705 IAIEGPEFREKSDEELSK------------------------------LIPKIQVM---- 730
I + + + + L +++
Sbjct: 680 ITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739
Query: 731 ---------ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781
R SP K +V+ ++ + G+ GDG ND + EAD+G+ GI+G E
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKE 797
Query: 782 --VAKESADVIILDDNFSTIVTVAKW-GRSVYINIQKFVQFQLTVNVVALIVNF---SSA 835
A ++D I F + + GR Y I K + + N++ I+ F
Sbjct: 798 GMQAVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYN 855
Query: 836 CLTGNAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSP----VGRKGNFISNVM 889
+G ++ N+ L ++L + + L R P G+KG S
Sbjct: 856 GFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFS--- 912
Query: 890 WRNILG---QSLYQFLIIWYL 907
+ G +YQ L+I++
Sbjct: 913 TKTFWGWMLDGIYQSLVIFFF 933
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-25
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 29/177 (16%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D ++P KE + + GI M+TGDN TAKA+A+E GI
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN---------- 455
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
V A P DK L+K L+ G+VVA+ GDG NDAPAL +AD+
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQ-EKGKVVAMVGDGINDAPALAQADV 497
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 828
G+A+G AGT+VA E+ADV++L ++ + + T R I++ + + NV+A+
Sbjct: 498 GIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 553
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 5e-24
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 34/199 (17%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G + + D RP E++A ++ GI V M+TGD A+ +ARE GI
Sbjct: 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------- 403
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK LR VA+ GDG NDAPAL AD
Sbjct: 404 -----------------EVHAELLPEDKLEIVKELREK-YGPVAMVGDGINDAPALAAAD 445
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830
+G+AMG +G++VA E+ADV++L+D+ S + + R +++ V L + ++ +++
Sbjct: 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505
Query: 831 NFSSACLTGNAPLTAVQLL 849
L G PL L
Sbjct: 506 A-----LFGVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-23
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTA-----------TSDY 222
TL+ LA + + + +P + + +L+
Sbjct: 150 DTLVALA--TIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRA 201
Query: 223 KQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282
++L LD K TV V +G ++ + ++ GDIV + G+++P DG+ VSG S
Sbjct: 202 IRAL----LDLAPKTATV-VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS- 255
Query: 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342
++ES LTGES PV + +GT +GS + VT VG T +++ + E
Sbjct: 256 SVDESMLTGESLPVEKKP-GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314
Query: 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
+ P+Q + VA+ + L A +TFA+ W G E
Sbjct: 315 KAPIQRLADRVASYFVPVVLVIAALTFAL---------------WPLFGGGDWE--TALY 357
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
A+ ++V+A P L LA ++ + + L++ A E + ++ DKTGTLT
Sbjct: 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 463 TNHMTV 468
V
Sbjct: 418 EGKPEV 423
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 3e-22
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV-FVTATSDYKQSLQFKDLD 232
LM LA + + +G+ EG +++ + L+ + + + S L
Sbjct: 2 DLLMALA--TIAAYAMGLVLEGA---------LLLFLFLLGETLEERAKGRASDALSALL 50
Query: 233 REKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
+ +G ++ + +L GDIV + G+++P DG+ +SG S ++ES+LTGE
Sbjct: 51 ALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGE 109
Query: 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
S PV + + +GT +GS + VT +G + +++ + E + P+Q +
Sbjct: 110 SMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADR 168
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
+A+ L A++TF V AL A+ ++VVA
Sbjct: 169 IASYYVPAVLAIALLTFVVW--------------LALGALGALYR------ALAVLVVAC 208
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
P L LA +++ A+ L++ A E + ++ DKTGTLTT TV
Sbjct: 209 PCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTV 264
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 6e-22
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
N E N EI+G PTE+A+L F LG D + R V PFNS +K+
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 565 MGVVIELP-EGGFRVHCKGASEIILAACDKF 594
M V +L + G+R+ KGA E IL C
Sbjct: 61 MSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 98.3 bits (246), Expect = 5e-21
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 31/144 (21%)
Query: 653 GIVGIKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ +KD ++PG+KE A R GI TV M+TGDN TA AIA E G+
Sbjct: 438 GVIYLKDIVKPGIKERFAELRKMGIKTV-MITGDNPLTAAAIAAEAGV------------ 484
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ L A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+
Sbjct: 485 -----DDFL----------AEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADV 528
Query: 772 GLAMGIAGTEVAKESADVIILDDN 795
G+AM +GT+ AKE+ +++ LD N
Sbjct: 529 GVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 2e-20
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATS--DYKQSLQFKDLD 232
LM LA AL ++ +G EG ++LL++F + +Y + L
Sbjct: 3 LLMALA--ALGAVAIGEYLEG-------------ALLLLLFSIGETLEEYASGRARRALK 47
Query: 233 REKKKI--TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ T +V R G ++++ +L GD+V + G++VP DG+ +SG S ++ES+LT
Sbjct: 48 ALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALT 106
Query: 291 GESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
GES PV + + +G +G ++VT + + K++ + E + Q +
Sbjct: 107 GESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFI 165
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
+ A + L A+ + V GL R W + A+ ++VV
Sbjct: 166 DRFARYYTPVVLAIALAIWLVP--GLLKR-------WPFW----------VYRALVLLVV 206
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A P L ++ + A+ L++ AA E + ++ DKTGTLTT V
Sbjct: 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKV 264
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 2e-20
Identities = 30/48 (62%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA 51
YL++ F D+ AKN+SEEAL+RWR+ G VKN +RRFR+TA+L+KR EA
Sbjct: 1 YLDDPF-DIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 5e-17
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
+G ++ + L PGDIV + G+++P DG + G S ++ES +TGES PV +P
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGESE-VDESLVTGESLPVPKKVGDP- 156
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+++GT GS + T G T +++ + + + P+Q + VA + +
Sbjct: 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAI 216
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
A++TF + W G D + LE AVT++++A P L LA +
Sbjct: 217 ALITFVI---------------WLILGADFVFALEV---AVTVLIIACPCALGLATPTVI 258
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKA 471
A A + L++ A E + ++ DKTGTLT TV
Sbjct: 259 AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 82.4 bits (203), Expect = 4e-16
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 636 NEFSADAPIP---TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692
S P E +G++ +KD ++ G+ E R GI M TGDN TA
Sbjct: 414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473
Query: 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752
IA+E G+ + +A P DK +++ + G +
Sbjct: 474 IAKEAGV---------------------------DRFVAECKPEDKINVIREEQAK-GHI 505
Query: 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812
VA+TGDGTNDAPAL EA++GLAM +GT AKE+A++I LD N + ++ V G+ + +
Sbjct: 506 VAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564
Query: 813 IQKFVQFQLTVNV 825
F + ++
Sbjct: 565 RGSLTTFSIANDI 577
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 5e-16
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 43/219 (19%)
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
+G++ ++D +R +++++ ++ GI M+TGDN A AIA E GI
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI------- 607
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+FR A P DK V L +A+ GDG NDAPA+
Sbjct: 608 ----DFR-----------------AGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAM 644
Query: 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826
A IG+AMG +GT+VA E+AD + + + + + R+ + NI++ + L + +
Sbjct: 645 KAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAI 703
Query: 827 ALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALAT 865
L+ + +TG LW+ ++ D+ GA AL T
Sbjct: 704 FLVT--TLLGITG---------LWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 4e-14
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 29/131 (22%)
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 716
I+DP+R ++ AG + M+TGDN TA AIA+E GI
Sbjct: 647 IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------------- 689
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+V+A P K +K L++ G VA+ GDG NDAPAL +AD+G+AMG
Sbjct: 690 ----------DEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG 738
Query: 777 IAGTEVAKESA 787
G++VA E+A
Sbjct: 739 -GGSDVAIETA 748
|
Length = 834 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 4e-12
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
VE + +L T + G++ +E R E YG N+ E + W D ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAE--AEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 178 ILAVCALVS 186
IL + A+VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 1e-11
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
D ERQ ++ + F+S +K+M V++ P+ +V KGA + + D+ LN N V
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMN--V 652
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN----------EFSADAPIPTEGY-- 649
+ EA HL+ ++S LRTL + E+ + E ++ A I
Sbjct: 653 IRATEA---HLH----TYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLR 705
Query: 650 ----------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699
T +G I+D ++ GV E++ R+AGI V ++TGD TA +I +
Sbjct: 706 KVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765
Query: 700 LTDN 703
LT+
Sbjct: 766 LTNK 769
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 1e-09
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + DP+ PG +E++ + AGI + ++TGDN TA AIAR G+ A
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGL 145
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+ K PKI +A ++ L EV+ V GDG ND PA A
Sbjct: 146 VG------VGKPDPKIFELA----------LEELGVKPEEVLMV-GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 3e-08
Identities = 117/486 (24%), Positives = 186/486 (38%), Gaps = 79/486 (16%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T +V + + + + D+ PG ++ L GD+VP DG G ++E+ LTGE P
Sbjct: 324 TARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIP-QQ 381
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ +GT VQ+GS + VG T +++ + + Q + +
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA-------QSSKPEIGQLAD 434
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
KI F V + L W + G A +I+ IA T++++A P L L
Sbjct: 435 KISAVFVPVVVVI--------ALVSAAIWYFFG-PAPQIVYTLVIATTVLIIACPCALGL 485
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
A +S+ + + LVR A + + ++ DKTGTLT V+ +
Sbjct: 486 ATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVD 545
Query: 479 EVDNSKGTPAF--GSSIP---ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 533
E + A GSS P A K ++ G + G G E G
Sbjct: 546 EAQALRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHA------ 599
Query: 534 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593
LLLG Q +E + + +GA+ ++LA
Sbjct: 600 ---LLLGNQALLNEQQVDTKALEAEITAQAS----------------QGATPVLLAV--- 637
Query: 594 FLNSNGEVV-------PLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIP 645
+G+ PL +V L ++ R + M G N +A+A I
Sbjct: 638 ----DGKAAALLAIRDPLRSDSVAAL----QRLHKAGYRLV----MLTGDNPTTANA-IA 684
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNG 704
E I G+ + G E++ +S G V MV GD IN A A+A+ + GI G
Sbjct: 685 KEAGIDEVIAGV---LPDGKAEAIKRLQSQGRQVAMV-GDGINDAPALAQADVGIAMGGG 740
Query: 705 --IAIE 708
+AIE
Sbjct: 741 SDVAIE 746
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 55.9 bits (134), Expect = 7e-08
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 206 IVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQ-VARNGFRRKISIYDLLPGDIVHL 264
++++++ F A ++ + Q L + + ++ + + ++G I DL G IV +
Sbjct: 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRV 131
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTT 322
G+Q+P DG + G + ++ES++TGES PV + F ++ GT V + ++ +T+
Sbjct: 132 ATGEQIPNDGKVIKGLAT-VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITS 190
Query: 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ 382
+ K++ + +TP ++ L T++ + + F VV + F
Sbjct: 191 EPGHSFLDKMIGLVEGATRKKTPNEIAL---FTLLMTLTIIFLVVILTMYPLAKF----- 242
Query: 383 EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++ L I A+AV ++ + GL A+ ++ M ++ L +
Sbjct: 243 --LNFN------LSIAMLIALAVCLIPTTI-GGLLSAIGIA---GMDRVTQFNILAKSGR 290
Query: 443 ACETMGSATSICSDKTGTLT 462
+ ET G + DKTGT+T
Sbjct: 291 SVETCGDVNVLILDKTGTIT 310
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 3e-07
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296
R+G R +++I DL PGD++ + G ++PADG +S F+ +ES+LTGES PV
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASF-DESALTGESIPV 300
|
Length = 741 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 8e-07
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + E+L T + G+S+ E RR E YG N+ + H+ + IL
Sbjct: 9 LEEVLERLQTDLEKGLSSEE--AARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILL 66
Query: 181 VCALVSLV 188
A++S +
Sbjct: 67 AAAVLSAL 74
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 5e-05
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 718 EELSKLIPKIQVMARSSP---------MDK----HTLVKHLRTTLGEVVAVTGDGTNDAP 764
+EL +L + + S P + K L KHL L EV+A GDG ND
Sbjct: 158 KELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHLGIDLEEVIAF-GDGENDIE 216
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDN 795
L A +G+AMG A + K +AD + +N
Sbjct: 217 MLELAGLGVAMGNA-SPEVKAAADYVTGSNN 246
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PGVKE++ + GI + + T + + E G+ I +E
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLF 86
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL-HEADIGLAM 775
L + + +P +K L EV+ V GD ND +G+A+
Sbjct: 87 LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 7e-05
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
L + L +L +V+A GDG ND L A G+AMG A E K AD + +N
Sbjct: 196 LAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 1e-04
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SVLINESSLTGESEPV 296
G ++ +L GDIV + G+ +PADG + G SV +ES++TGES PV
Sbjct: 112 PGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASV--DESAITGESAPV 162
|
Length = 679 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 713 REKSDEELSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
R+ S +L++ IP +V A + P K +++ L+ E V + G+G ND AL EAD
Sbjct: 55 RKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREAD 113
Query: 771 IG-LAMGIAGT-EVAKESADVIILD 793
+G + G E +ADV++ +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
+ PG +E VA ++AG V +++G + IA GI D +A E E D
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI--DYVVANE----LEIDDG 129
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 774
+L+ + L + L E VA GD ND P L A + +A
Sbjct: 130 KLTGRVVGPICDGEGK---AKALRELAAELGIPLEETVAY-GDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 791
L K L L EV+A GD TND L A +G+AMG A E KE AD +
Sbjct: 197 LAKLLGIKLEEVIAF-GDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVT 245
|
Length = 264 |
| >gnl|CDD|226555 COG4069, COG4069, Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.003
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 36/197 (18%)
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTL--CLACMEIGNEFSADAPIPTEGYTCIGIV 655
+GE++P N AA H + E + R EI N+ I
Sbjct: 114 DGELIPWNRAARPHAEKLSELLGLKISRPPLPVRNNGEICNQ--------IGKRVVRRIS 165
Query: 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI--AIEGPEFR 713
GV I +V G I KA + E ++ +NG IEG +
Sbjct: 166 --------GVFPGENI---------LVNG--IVVGKATSSEVELVAENGFLTDIEGGRIK 206
Query: 714 EKSDEELSKLIP-----KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 768
E E+L ++ K + RS K + +V+ + +
Sbjct: 207 EHGIEKLHRVDLARAVVKTGALRRSPDEPKKVKSRKENAHAVKVILIDHAAERSYELIEG 266
Query: 769 ADIGLAMGIAGTEVAKE 785
A + + +G TEVA +
Sbjct: 267 AGLVVTVGDDTTEVAGD 283
|
Length = 367 |
| >gnl|CDD|213628 TIGR01487, Pglycolate_arch, phosphoglycolate phosphatase, TA0175-type | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.004
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 27/118 (22%)
Query: 677 ITVRMVTGDNINTAKAIARECGI-LTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735
V M G +++ + I +E G+ L +G AI
Sbjct: 108 SLVIMREGKDVDEVREIIKERGLNLVASGFAI----------------------HIMKKG 145
Query: 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
+DK V+ L+ LG E VA GD ND +A+ A + KE AD +
Sbjct: 146 VDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYV 202
|
This group of Archaeal sequences, now known to be phosphoglycolate phosphatases, is most closely related to the sucrose-phosphate phosphatases from plants and cyanobacteria (TIGR01485). Together, these two models comprise a subfamily model (TIGR01482). TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Length = 215 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 950 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.89 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.72 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.65 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.53 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 99.52 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.52 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.14 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.1 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.07 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.06 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.02 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.0 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.0 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.0 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.98 | |
| PLN02887 | 580 | hydrolase family protein | 98.96 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.96 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.92 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.92 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.87 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.84 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.78 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.77 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.69 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.67 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.65 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.63 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.56 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.5 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.49 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.43 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.34 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.33 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.24 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.22 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.21 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.12 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.11 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.06 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.03 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.02 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.01 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.01 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.98 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.96 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.95 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.89 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.86 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.85 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.81 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.71 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.59 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.55 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.55 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.55 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.44 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.42 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.4 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.31 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.28 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.25 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.15 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.15 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.1 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.09 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.08 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.07 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.07 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.07 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.04 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.04 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.88 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.79 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.75 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.67 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.65 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.57 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.53 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.49 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.41 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.39 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.36 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.36 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.29 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.19 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.14 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.14 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.13 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.07 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.06 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.87 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.84 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.82 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.76 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.7 | |
| PLN02940 | 382 | riboflavin kinase | 95.67 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.65 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.39 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.36 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.35 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.29 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.19 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.12 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.09 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.89 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.81 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.79 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.56 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.52 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.44 | |
| PLN02811 | 220 | hydrolase | 94.23 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.92 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.58 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 93.51 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.43 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.29 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.12 | |
| PLN02423 | 245 | phosphomannomutase | 93.0 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.96 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.96 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.71 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.58 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.56 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.48 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.27 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.96 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 90.68 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 90.06 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 90.02 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 89.47 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 88.89 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 88.81 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 88.41 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.36 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 87.31 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 84.87 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 84.62 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 83.9 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 83.0 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 82.72 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 82.7 | |
| PF00403 | 62 | HMA: Heavy-metal-associated domain; InterPro: IPR0 | 82.53 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 80.23 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-215 Score=1794.30 Aligned_cols=923 Identities=60% Similarity=0.928 Sum_probs=872.7
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhccccccccchhhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC
Q 002230 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (950)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (950)
++.++|. .+.+|++.++++|||.|. .++|++|||||.+++++..|....++ +.|+...+.+|+.+|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 4556776 888999999999999877 99999999999999998887555554 8899999999999998873 333
Q ss_pred ccccccccccCCcccChhhhhhhhccCChHHHHHhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccH
Q 002230 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (950)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f 163 (950)
++.+ +++++++.++++.++.+.|+.+||++|+|+.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 3322 7888999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEE
Q 002230 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (950)
Q Consensus 164 ~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (950)
|+++|++|+|.++++|++||++|+++++++++++++||||++|++++++|++++|++||+|++||++|+++..+.+++|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccC-CCCeEEeccEEeeceEEEEEEE
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~-~~~~l~sGt~v~~G~~~~~V~~ 322 (950)
|||++++|++.|||||||++|+.||+|||||++++|++|.+|||+|||||++++|+. .+|||+|||++.+|+++|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCc--cccCCcchHHHHHH
Q 002230 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (950)
Q Consensus 323 ~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (950)
+|+||+||++|..+....+++||||.+++++|..|+++++.+|++++++++.+|+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999877655433 56666667789999
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeec
Q 002230 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (950)
Q Consensus 401 ~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (950)
|.++++++|+|+|||||||||++|+|+++||++|++|||+++||||||++++||+|||||||+|+|+|++.|++++.+..
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCC--ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecC
Q 002230 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (950)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF 558 (950)
+... .+.+++...+++.++++.|++.++..++.+ .+++.|+|||+||+.|+..+|++++..|.+.++++++||
T Consensus 466 ~~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCcc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 4321 156889999999999999999999987665 789999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEcCCCc-EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC
Q 002230 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~ 637 (950)
||.||+|+++++.++++ | +|||||+|+|+.+|+++++++|+..+++++.++.+++.|+.||++||||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996543
Q ss_pred ----CC-CCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCc
Q 002230 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (950)
Q Consensus 638 ----~~-~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~vi~g~ 710 (950)
++ +.++.++.+++++|++||+||+|||++++|+.||+|||+|+|+||||..||++||.+|||.++++ .+++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 23357789999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred ccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEE
Q 002230 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790 (950)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDiv 790 (950)
+|++++++++++++|+++|+||++|.||+.+|+.|+++ |++||+||||+||+|||++||||+|||++|||+|||+||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCc
Q 002230 791 ILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNG 870 (950)
Q Consensus 791 l~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~ 870 (950)
|+||||++|+++++|||++|+||+||+||||++|+++++++|++++..+.+||+++||||+|+|||+|++||||||||++
T Consensus 779 i~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~ 858 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTD 858 (1034)
T ss_pred EEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--cccccchHHhHHHHHHHHHHHHhcccC
Q 002230 871 DLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD--PDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 871 ~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+||+|+|++|++||||+.||+||++|++||++++|+++|.|..+|+.+++. ++..++|++||+|||||+|||||+|++
T Consensus 859 ~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki 938 (1034)
T KOG0204|consen 859 ELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKI 938 (1034)
T ss_pred HHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcch
Confidence 999999999999999999999999999999999999999999999877653 477899999999999999999999998
Q ss_pred C
Q 002230 949 E 949 (950)
Q Consensus 949 ~ 949 (950)
|
T Consensus 939 ~ 939 (1034)
T KOG0204|consen 939 D 939 (1034)
T ss_pred h
Confidence 5
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-147 Score=1245.06 Aligned_cols=810 Identities=34% Similarity=0.520 Sum_probs=701.2
Q ss_pred cCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCC
Q 002230 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~ 198 (950)
..+++.+..|.||++.||+.++ +.+|++.||.|+++...++|+|+.+++||.|+...+|+++|++|+++..
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4588899999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
|.|+++|.+++++++.+..+++|+.++..+.|.+. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++
T Consensus 78 -~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 78 -FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 56889999999999999999999999999999874 5568999999999999999999999999999999999999999
Q ss_pred ecceEEEcccccCCCCccccc-------------CCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCCh
Q 002230 279 GFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (950)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tp 345 (950)
..++.||||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|++...+.+.++++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 999999999999999999994 2356899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 002230 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (950)
Q Consensus 346 lq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~ 425 (950)
||+++|.+.+.+..+..++++.++++-+ +++. .-.++. .....+..+|.+++++.|+++|||||..+|++++
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~ni-g~f~-~p~~~g------~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNI-GHFL-DPVHGG------SWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhh-hhhc-cccccc------cchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 9999999999988665555444443321 2221 111111 1223577899999999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeecc------CCCCCCC----------C
Q 002230 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKGTPA----------F 489 (950)
Q Consensus 426 ~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~~----------~ 489 (950)
.+.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... ...+.+. .
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 99999999999999999999999999999999999999999999999976543211 1111110 0
Q ss_pred CCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHH---------------HhhhcceEE
Q 002230 490 GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVK 554 (950)
Q Consensus 490 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~---------------~~~~~~i~~ 554 (950)
......+.+.-+.+..+.|+.+.+..++.+.++..|.|||.||..++.+.++.-.. ..+.++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 01122334445566667777777776655666779999999999999998875422 223445669
Q ss_pred EecCCCCCceEEEEEEcCCC--cEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHhcccceeEEEE
Q 002230 555 VEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631 (950)
Q Consensus 555 ~~pF~s~~k~msvvv~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~ 631 (950)
++||+|+||+|+|.+..+.+ ++.+|+|||+|.|+++|++++..+| ..+|+++..|+.+.+...+|+++|||||++|+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 99999999999999986544 5899999999999999988887776 55999999999999999999999999999999
Q ss_pred EEcCCC--------CCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 002230 632 MEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (950)
Q Consensus 632 ~~~~~~--------~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~ 703 (950)
++.+.. ....+...|.+|+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++||...+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 977631 122345678999999999999999999999999999999999999999999999999999998876
Q ss_pred c----eeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCC
Q 002230 704 G----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (950)
Q Consensus 704 ~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g 779 (950)
. .+++|++|+.++++++++...++.||+|++|.+|.++|+.||++ |++|+|||||+||+||||.||||||||++|
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCc
Confidence 6 88999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHH
Q 002230 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLG 859 (950)
Q Consensus 780 ~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~ 859 (950)
|++||+|||+||.||||++|+.++++||.+|+||++|+.|++..|+.++...|+++.+..+.||+|+|+||+|++||.+|
T Consensus 707 TdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~P 786 (972)
T KOG0202|consen 707 TDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPP 786 (972)
T ss_pred cHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHH---HHHhc--cc--ccccCC----------CC-
Q 002230 860 ALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWY---LQTRG--KA--VFRLDG----------PD- 921 (950)
Q Consensus 860 ~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~---l~~~~--~~--~~~~~~----------~~- 921 (950)
|.+|+.|||+.|+|+|||+++++++|+...+..++..++|..+..+. ..|.+ .. +..+.+ .+
T Consensus 787 A~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c 866 (972)
T KOG0202|consen 787 ATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRC 866 (972)
T ss_pred hhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccch
Confidence 99999999999999999999999999999998898888876543322 22221 10 000000 00
Q ss_pred ---cccccchHHhHHHHHHHHHHHHhcccC
Q 002230 922 ---PDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 922 ---~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
......||.|..||+...||.+|||+-
T Consensus 867 ~~F~~~~~~tMa~tv~V~~emfNaL~~~se 896 (972)
T KOG0202|consen 867 AVFEDMCPLTMALTVLVFIEMFNALNCLSE 896 (972)
T ss_pred hhhcccccceEEEeehhHHHHHHHhhcccC
Confidence 011235999999999999999999974
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-142 Score=1328.22 Aligned_cols=846 Identities=51% Similarity=0.811 Sum_probs=746.3
Q ss_pred ccCCcccChhhhhhhhcc-CChHHHHHhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHH
Q 002230 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (950)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~ 170 (950)
...||.+.-.+++++.+. ++.+.|+.+||++++++.|+++...||+.+++++++|+++||+|+++.++++++|++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 456899999999998865 4678889999999999999999999999333349999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhcc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeC
Q 002230 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (950)
Q Consensus 171 ~~~~~~~il~i~a~~s~~~~~~-----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~ 245 (950)
|+++++++|++++++++++++. .++..+.|+++++|+++++++++++++++|+++++++++++..++.+++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 22334589999999999999999999999999999999987666779999999
Q ss_pred CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCC-CCeEEeccEEeeceEEEEEEEEe
Q 002230 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (950)
Q Consensus 246 g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~-~~~l~sGt~v~~G~~~~~V~~~G 324 (950)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|+++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997799999999999999999754 46899999999999999999999
Q ss_pred eccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHH
Q 002230 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (950)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (950)
.+|++|++++++.+++ +++|+|++++++++++.++++++++++|++++..++......+.. ........+...+..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999988765 568999999999999999999888888887765443321111000 0000112567788999
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCC
Q 002230 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (950)
Q Consensus 405 i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (950)
+++++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..++.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~- 409 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV- 409 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976654432211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 002230 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (950)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~ 564 (950)
....++...+++..++++|+......++.+..+..|||+|.|+++++.+.+.+....+..+++++.+||+|++|+
T Consensus 410 -----~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 410 -----LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred -----cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 111233455566667776665443322233445689999999999999888877777777888999999999999
Q ss_pred EEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCC
Q 002230 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (950)
Q Consensus 565 msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~ 644 (950)
|+++++.+++.+++++|||||.+++.|+.+++.+|...++++ .++++++.+++|+++|+|++++|||+++.+.....+.
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999777779999999999999999988777888888887 7788999999999999999999999986543323334
Q ss_pred CCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|++|||.+++..+++|++++.++++++.+.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+++.||||++|+||.++|+.+|++ |++|+|||||+||+|||++||||||||++|+|+|+++||+++++|+|++|+++++
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCC
Q 002230 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884 (950)
Q Consensus 805 ~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~l 884 (950)
|||++|+||+|+++|++++|+..+++.+++.++.+++|++++|+||+|+++|.+|+++|++|+|++++|++||+++++++
T Consensus 723 ~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~l 802 (941)
T TIGR01517 723 WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPL 802 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-----CcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 885 ISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGP-----DPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 885 i~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+++.||++|+++++||+++.+++++.+..+++..+. +.....+|++|++||+||+||.+|||+.
T Consensus 803 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~ 871 (941)
T TIGR01517 803 ISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKL 871 (941)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccC
Confidence 999999999999999999988887776666644331 1234678999999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-135 Score=1262.60 Aligned_cols=798 Identities=28% Similarity=0.412 Sum_probs=682.7
Q ss_pred cCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCC
Q 002230 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~ 198 (950)
..++.+++.|++++..||++++ +++|+++||+|+++.++++++|+.++++|+++++++|+++++++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 4578899999999989999987 999999999999999999999999999999999999999999999876
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
.|+|+++|++.+++..+++.+++|+.+++.++|.+.. +.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~-~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA-SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 5899999999999999999999999999999998754 558999999999999999999999999999999999999999
Q ss_pred ecceEEEcccccCCCCcccccCC--------------CCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCC---
Q 002230 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (950)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~~~--------------~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~--- 341 (950)
+++|.||||+|||||.|+.|... .+++|+||.|.+|.++++|++||++|++|+|.+++.+...
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 99999999999999999999521 3679999999999999999999999999999998864321
Q ss_pred --------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcccc
Q 002230 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (950)
Q Consensus 342 --------------------------------~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~ 389 (950)
.+||||+++++++.+++.+++++++++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999998888887777666532110
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEE
Q 002230 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (950)
Q Consensus 390 ~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (950)
.+...+..+++++++++|+|||+.++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|+
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11245667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcc-eeeeccCC--CCCCC------------------------C-------------CCCCChHHHHHHHHHHHhcC
Q 002230 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (950)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (950)
++|..+ ..+..+.. ...+. . .....++....+.....+|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999764 22222110 00000 0 00001112233455556666
Q ss_pred CCceeec-CCCceeecCChhhhHHHHHHHHcCCChH------HH-------------------hhhcceEEEecCCCCCc
Q 002230 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (950)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~------~~-------------------~~~~~i~~~~pF~s~~k 563 (950)
.+.+..+ +++.+...|||+|.||+.++.+.|.+.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 6665432 2334466899999999999988886421 11 23478999999999999
Q ss_pred eEEEEEEcCCC-cEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC-
Q 002230 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA- 640 (950)
Q Consensus 564 ~msvvv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~- 640 (950)
||+++++.+++ .+++|+|||||.|+++|+.+...+| +..+++++.++++.+.+++|+++|+|||++|||.++.+...
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999986544 5889999999999999998765555 56799999999999999999999999999999998653110
Q ss_pred --------CCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 002230 641 --------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (950)
Q Consensus 641 --------~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~---------- 702 (950)
..+..|+|++|+|+++++||+||+++++|+.|+++||+++|+|||++.||.++|+++||..+
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 12346889999999999999999999999999999999999999999999999999999754
Q ss_pred CceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 703 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
...+++|++++.++++++.+.+.+..||||++|+||.++|+.+|++ |++|+|||||+||+|||++||||||||++|+++
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 3479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C--CCChhHHHHHHHHHHHHH
Q 002230 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT---G--NAPLTAVQLLWVNMIMDT 857 (950)
Q Consensus 783 ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~---~--~~pl~~~qll~~nli~d~ 857 (950)
|+++||+++++|||++|+++++|||++|+||+|+++|.++.|+..+++.+++.++. | +.||+++|+||+|+++|.
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~ 857 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988887774 3 479999999999999999
Q ss_pred HHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH---hcc--cccccC-----CC--Ccccc
Q 002230 858 LGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT---RGK--AVFRLD-----GP--DPDLI 925 (950)
Q Consensus 858 l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~---~~~--~~~~~~-----~~--~~~~~ 925 (950)
+|+++|++|||++++|+|||+.++++++++.+|+.++.++++++++.+..++ ++. ...... +. .....
T Consensus 858 ~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1053)
T TIGR01523 858 FPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFK 937 (1053)
T ss_pred HHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhh
Confidence 9999999999999999999999999999999999999999888776655443 211 000000 00 01234
Q ss_pred cchHHhHHHHHHHHHHHHhcccC
Q 002230 926 LNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 926 ~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
.+|+.|.+++++|+||.||||+.
T Consensus 938 a~t~~f~~l~~~~~~~~~~~r~~ 960 (1053)
T TIGR01523 938 ARSAAFATMTFCALILAVEVKDF 960 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999985
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-132 Score=1240.31 Aligned_cols=808 Identities=29% Similarity=0.409 Sum_probs=677.9
Q ss_pred hcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccc---
Q 002230 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE--- 194 (950)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~--- 194 (950)
-..++++++.|+++...||++++ +++|+++||+|+++.++++++|+.++++|+++++++|+++++++++.....+
T Consensus 19 ~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~ 96 (997)
T TIGR01106 19 KLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTE 96 (997)
T ss_pred hCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccC
Confidence 34688999999999999999987 9999999999999999999999999999999999999999999877543221
Q ss_pred --CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecc
Q 002230 195 --GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (950)
Q Consensus 195 --~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPa 272 (950)
.....|++++.+++.+++..+++.+.+++.++..+++.+ ..+.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 97 ~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 97 EEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112467887755444444444444445444444444444 34568999999999999999999999999999999999
Q ss_pred cEEEEeecceEEEcccccCCCCcccccCCC---------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCC
Q 002230 273 DGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (950)
Q Consensus 273 Dgill~g~~l~VDeS~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (950)
||++++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|+.|++.+.+.+...++
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 999999988999999999999999996543 47999999999999999999999999999999998888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 002230 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (950)
Q Consensus 344 tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~ 423 (950)
+|+|+++++++..+..+++++++++++++... +. .+...+..++++++++||||||++++++
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~v~v~~iP~~L~~~v~i~ 317 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY----------TWLEAVIFLIGIIVANVPEGLLATVTVC 317 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC----------CHHHHHHHHHHHHhhcCCccchHHHHHH
Confidence 99999999999999988888777766654221 10 2446677889999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHH
Q 002230 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (950)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (950)
+++++++|.++|++||+++++|+||++++||||||||||+|+|+|.++|..+..+..+.................+.+..
T Consensus 318 l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 397 (997)
T TIGR01106 318 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSR 397 (997)
T ss_pred HHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887665432111000001111123334556
Q ss_pred HHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcC---CCcE
Q 002230 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGF 576 (950)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~---~~~~ 576 (950)
.++.|+++....+.++ +....|||+|.||++++...+.+....+..+++++.+||+|+||||+++++.. ++.+
T Consensus 398 ~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~ 477 (997)
T TIGR01106 398 IAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRH 477 (997)
T ss_pred HHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceE
Confidence 6777776655433222 23557999999999999877767777778899999999999999999988643 2468
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC--------CCCCCCCc
Q 002230 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEG 648 (950)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~--------~~~~~e~~ 648 (950)
++|+|||||.|+++|++++ .+|+..+++++.++.+++.+++|+++|+||+++|||.++.+... +.+..|+|
T Consensus 478 ~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~ 556 (997)
T TIGR01106 478 LLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDN 556 (997)
T ss_pred EEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccC
Confidence 8999999999999999876 57888899999999999999999999999999999998653111 11233789
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------c
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------G 704 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~------------------------~ 704 (950)
++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..++ .
T Consensus 557 L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 636 (997)
T TIGR01106 557 LCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKA 636 (997)
T ss_pred cEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999997542 2
Q ss_pred eeeeCcccccCCHHHHhhhhcccc--EEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 705 IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 705 ~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
.+++|.+++.++++++.+.++++. ||||++|+||.++|+.+|+. |++|+|+|||.||+|||++||||||||++|+|+
T Consensus 637 ~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v 715 (997)
T TIGR01106 637 CVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 715 (997)
T ss_pred eEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHH
Confidence 699999999999999999998764 99999999999999999998 999999999999999999999999999889999
Q ss_pred HHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHH
Q 002230 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA 862 (950)
Q Consensus 783 ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la 862 (950)
||++||++++||||++|+++++|||++|.||+|+++|+++.|+..+++.++++++..++||+++|+||+|+++|++|+++
T Consensus 716 ak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~a 795 (997)
T TIGR01106 716 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAIS 795 (997)
T ss_pred HHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCccccccCCCCC-CCCCcCHHHHHHHH-HHHHHHHHHHHHHHHh-----c---cccccc---------CCC-Cc
Q 002230 863 LATEPPNGDLMKRSPVGR-KGNFISNVMWRNIL-GQSLYQFLIIWYLQTR-----G---KAVFRL---------DGP-DP 922 (950)
Q Consensus 863 l~~e~p~~~l~~~~P~~~-~~~li~~~~~~~i~-~~~~~~~~~~~~l~~~-----~---~~~~~~---------~~~-~~ 922 (950)
|++|||++++|+|||+.+ .++++++.+|..++ ..+++|++..++.++. | ..++++ ++. +.
T Consensus 796 l~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 875 (997)
T TIGR01106 796 LAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDS 875 (997)
T ss_pred HhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccc
Confidence 999999999999999974 67999998876643 3455665554443321 1 112221 000 00
Q ss_pred -------------ccccchHHhHHHHHHHHHHHHhcccC
Q 002230 923 -------------DLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 923 -------------~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
....+|+.|++|++||+||.+|||+-
T Consensus 876 ~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~ 914 (997)
T TIGR01106 876 YGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR 914 (997)
T ss_pred cccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 01468999999999999999999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-131 Score=1223.78 Aligned_cols=778 Identities=32% Similarity=0.521 Sum_probs=682.8
Q ss_pred cCHHHHHHHhCCCccCCCC-hhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHH-hhHHHHHHHHHHHHHHHhhccccCC
Q 002230 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~-~~~~~~il~i~a~~s~~~~~~~~~~ 196 (950)
..++++++.|+++...||+ +++ +++|+++||+|+++.++++++|+.++++| +++++++++++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3688999999999999999 655 99999999999999999999999999999 9999999999999999886
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEE
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgil 276 (950)
.|.|+++|++.++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 588999988888888999999999999998888764 45689999999999999999999999999999999999999
Q ss_pred EeecceEEEcccccCCCCcccccCC-------------CCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCC
Q 002230 277 VSGFSVLINESSLTGESEPVNVNAL-------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (950)
Q Consensus 277 l~g~~l~VDeS~LTGEs~pv~k~~~-------------~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (950)
++|+++.||||+|||||.|+.|.++ ++++|+||.|.+|+++++|++||.+|++|++.+++.+....+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9998899999999999999999754 258999999999999999999999999999999999888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 002230 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (950)
Q Consensus 344 tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~ 423 (950)
+|+|+.+++++++++.++++++++++++. ++. +. .+...+..++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999998887765554444332 111 10 3557788899999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee-ccCCCCCC---------CCCCCC
Q 002230 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-VDNSKGTP---------AFGSSI 493 (950)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-~~~~~~~~---------~~~~~~ 493 (950)
+++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..++.+. .+.....+ ......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999987654321 11000000 000011
Q ss_pred ChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcC-
Q 002230 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (950)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~- 572 (950)
++...+++ ...+.|+++.....+ .+..|||+|.|+++++.+.|.+ ..+..++.++.+||+|+||+|+++++..
T Consensus 378 ~~~~~~~l-~~~~l~~~~~~~~~~---~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRIL-EAGNLCNNAKFRNEA---DTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHHH-HHHhhhCCCeecCCC---CCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 12233333 344445554433221 1346899999999999887653 3445688899999999999999998753
Q ss_pred CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEE
Q 002230 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (950)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~l 652 (950)
++++++++||+||.|+..|++++..+|...+++++.++++.+.+++|+++|+|++++||+++ +++++++
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-----------~~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-----------KGQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------CCCeEEE
Confidence 56789999999999999999998878888899999999999999999999999999999865 3579999
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 732 (950)
|+++++||+|||++++|++|+++|++++|+|||+..||.++|+++||......+++|++++.++++++++.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred cChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~ 812 (950)
++|+||..+|+.+|+. |++|+|+|||.||+|||++||||||||.+|+++++++||+++++|||++|++++++||++|+|
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~n 679 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHH
Q 002230 813 IQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 892 (950)
Q Consensus 813 i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~ 892 (950)
|+|+++|+++.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||++
T Consensus 680 i~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~ 759 (884)
T TIGR01522 680 IKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKK 759 (884)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHH
Confidence 99999999999999999988888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 893 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 893 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+++++++++++.+++++.. +.. + .....++|++|++||+||+||.||||+.
T Consensus 760 ~~~~g~~~~~~~~~~~~~~--~~~--~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~ 810 (884)
T TIGR01522 760 ILVSAIIIVVGTLFVFVRE--MQD--G-VITARDTTMTFTCFVFFDMFNALACRSQ 810 (884)
T ss_pred HHHHHHHHHHHHHHHHHHH--HcC--C-cchhhHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999987766655432 111 1 1123568999999999999999999984
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-132 Score=1229.00 Aligned_cols=787 Identities=37% Similarity=0.543 Sum_probs=692.9
Q ss_pred HHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcch
Q 002230 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (950)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d 202 (950)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|+.++.+|+++++++|+++++++++++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566778888899999966 999999999999999999999999999999999999999999999988532110 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecce
Q 002230 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (950)
Q Consensus 203 ~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l 282 (950)
+..|...+++..++..+++|+.++..+++.+.. +.+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 556666777777888888988888888887755 5689999999999999999999999999999999999999999988
Q ss_pred EEEcccccCCCCccccc-------------CCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHH
Q 002230 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (950)
Q Consensus 283 ~VDeS~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~ 349 (950)
+||||+|||||.|+.|. ..++++|+||.|.+|.+.++|++||++|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 34688999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 002230 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (950)
Q Consensus 350 l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~ 429 (950)
++++..++..++++++++++++... .. +. .+...|..++++++.++|+|||+.++++++.+++
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~---~~----~~----------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLF---RG----GN----------GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hc----Cc----------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9999999999998888888776521 10 00 2567899999999999999999999999999999
Q ss_pred HHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcC
Q 002230 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (950)
Q Consensus 430 ~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (950)
+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+...+.+ ..... ..+....+...+++||
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLK-DSPALLRFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccc-cchHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00111 1122223455666777
Q ss_pred CCceeecCCCceeecCChhhhHHHHHHHHcCC--ChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHH
Q 002230 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (950)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~i 587 (950)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++++||+|+||||+++++..++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 7666544 3 777999999999999999998 7777778889999999999999999999977777999999999999
Q ss_pred HHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCC-CCCCCceEEEeeeeccCCCCccHH
Q 002230 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (950)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~-~~~e~~l~~lG~~~i~D~lr~~~~ 666 (950)
+++|++. ++..+++++.++.+++..++|+++|||++++|||.++..+.... +..|+|++|+|+++|+||||++++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999976 67778999999999999999999999999999997766533222 567899999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHH
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~ 744 (950)
++|+.|++|||++||+||||+.||.+||++||+..+. ..+++|.+++.++++++.+.+.++.||||++|+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998776 45999999999999999999999999999999999999999
Q ss_pred HhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (950)
Q Consensus 745 l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N 824 (950)
||++ |++|+|||||+||+||||+||||||||++|+|+||++||+++.+|+|..++.+++|||++|.|++|+++|.+++|
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCC-CChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Q 002230 825 VVALIVNFSSACLTGN-APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLI 903 (950)
Q Consensus 825 ~~~~~~~~~~~~~~~~-~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~ 903 (950)
+..+++.+++.++..+ .||+++|+||+|+++|++|+++|+.++|+.++|++||+++.++++++..+..++++..++.++
T Consensus 713 ~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i 792 (917)
T COG0474 713 VGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAI 792 (917)
T ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHH
Confidence 9999999888887776 899999999999999999999999999999999999999999999999888877777777777
Q ss_pred HHHHHHhcccccccCC---CCc-ccccchHHhHHHHHHHHHHHHhcccC
Q 002230 904 IWYLQTRGKAVFRLDG---PDP-DLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 904 ~~~l~~~~~~~~~~~~---~~~-~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+.++.|....+..... ... ....+|+.|++++++|+++.+++|..
T Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~ 841 (917)
T COG0474 793 LFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR 841 (917)
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7666554332222111 111 34578999999999999999999986
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-128 Score=1187.25 Aligned_cols=765 Identities=25% Similarity=0.380 Sum_probs=653.4
Q ss_pred CHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc---cCC
Q 002230 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT---EGW 196 (950)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~---~~~ 196 (950)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|+++++++|+++++++++++.+. ++.
T Consensus 31 ~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 5677888899984 7999987 999999999999999999999999999999999999999999999987542 122
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCC------eEEEEecCCcCCCcEEEeCCCCee
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG------FRRKISIYDLLPGDIVHLCMGDQV 270 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g------~~~~I~~~dLvvGDiV~l~~Gd~v 270 (950)
...|.+++.|++.+++..++..+++|+.+++.++|.+.. +..++|+||| ++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 246899999988888888999999999999999988754 4589999994 789999999999999999999999
Q ss_pred cccEEEEeecceEEEcccccCCCCcccccC----------------------CCCeEEeccEEeeceEEEEEEEEeeccc
Q 002230 271 PADGLFVSGFSVLINESSLTGESEPVNVNA----------------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (950)
Q Consensus 271 PaDgill~g~~l~VDeS~LTGEs~pv~k~~----------------------~~~~l~sGt~v~~G~~~~~V~~~G~~T~ 328 (950)
||||++++|+++.||||+|||||.|+.|.. .++.+|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999964 1267999999999999999999999999
Q ss_pred hhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHH
Q 002230 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 408 (950)
Q Consensus 329 ~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il 408 (950)
+|+|.+++.+ ...++|+|++++++++++..+++.++.+++++.. +. .+ .+...+..+++++
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~~-----------~~~~~l~~aisl~ 327 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----KG-----------DWLEALLFALAVA 327 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----cC-----------CHHHHHHHHHHHH
Confidence 9999999887 5566999999999999888877666554443321 11 00 3556788899999
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCC
Q 002230 409 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488 (950)
Q Consensus 409 vvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 488 (950)
+++||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~----------- 396 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR----------- 396 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999987632211
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEE
Q 002230 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 568 (950)
Q Consensus 489 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvv 568 (950)
.+++. +..+. .|+.. . ...+||+|.|+++++.+.+.+ ..+..++.++.+||+|.+|+|+++
T Consensus 397 ----~~~~~---l~~a~-l~s~~--~-------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v 457 (903)
T PRK15122 397 ----KDERV---LQLAW-LNSFH--Q-------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVV 457 (903)
T ss_pred ----ChHHH---HHHHH-HhCCC--C-------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEE
Confidence 01122 22222 23211 0 126899999999999876643 233467888999999999999999
Q ss_pred EEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC--CCCCCC
Q 002230 569 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--DAPIPT 646 (950)
Q Consensus 569 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~--~~~~~e 646 (950)
++..++++++++||+||.++++|+++. .+|...+++++.++++.+..++++++|+|++++|||+++.++.. .....|
T Consensus 458 ~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 458 VEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred EEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 987667788999999999999999765 46777899999999999999999999999999999988654221 112346
Q ss_pred CceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcc
Q 002230 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (950)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 726 (950)
+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. +.+++|++++.++++++.+.+++
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~ 614 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEE 614 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhh
Confidence 7899999999999999999999999999999999999999999999999999953 46899999999999999999999
Q ss_pred ccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHH
Q 002230 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (950)
Q Consensus 727 ~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~g 806 (950)
..||||++|+||.++|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|+++|||++|++++++|
T Consensus 615 ~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 615 RTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred CCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcC
Q 002230 807 RSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFIS 886 (950)
Q Consensus 807 R~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~ 886 (950)
|++|+||+|+++|+++.|+..+++.+++.++..+.|++++|+||+|+++|+ |+++|++|||++++| |||+++++++++
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~ 770 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIG 770 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhH
Confidence 999999999999999999998888777777777789999999999999996 899999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 887 NVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 887 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+.|+...+..+++.+..++ ++++. +...........+|..|.+++++|+||.||||+-
T Consensus 771 ~~~~~~g~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~ 828 (903)
T PRK15122 771 RFMLWIGPTSSIFDITTFA-LMWFV---FAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQ 828 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHH---hccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcC
Confidence 9888643333333332222 22211 1111100011246888999999999999999985
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-127 Score=1180.10 Aligned_cols=759 Identities=24% Similarity=0.374 Sum_probs=643.3
Q ss_pred CHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCC
Q 002230 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (950)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~ 199 (950)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++++++|+.+|++|+++++++++++++++++.+ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5778888899987 6999987 999999999999999999999999999999999999999999998875 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeC------CeEEEEecCCcCCCcEEEeCCCCeeccc
Q 002230 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (950)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~I~~~dLvvGDiV~l~~Gd~vPaD 273 (950)
|.+++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 888988888888888888888888888888887754 458999999 7899999999999999999999999999
Q ss_pred EEEEeecceEEEcccccCCCCcccccCCC------------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCC
Q 002230 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (950)
Q Consensus 274 gill~g~~l~VDeS~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~ 341 (950)
|++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997543 479999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHH
Q 002230 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (950)
Q Consensus 342 ~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~ 421 (950)
+++|+|+.++++++++..++++++.++++++.. . .+ .+...+..++++++++||||||++++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 889999999999999988887777666554321 1 00 24567888999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHH
Q 002230 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (950)
Q Consensus 422 l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (950)
++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++... . .++ .+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------~----------~~~--~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------G----------KTS--ERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------C----------CCH--HHHH
Confidence 999999999999999999999999999999999999999999999998763110 0 001 1222
Q ss_pred HHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEc
Q 002230 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (950)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~K 581 (950)
...+.|+.. . ...+||+|.|+++++...+ .......++.++.+||+|++|+|+++++..++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 223333321 1 1168999999999986543 122345678889999999999999998876777889999
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCC
Q 002230 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (950)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~l 661 (950)
|+||.++++|+++. .+|...+++++.++++.+..++++++|+|++++|||+++.+........|+|++|+|+++|+||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999775 45677899999899999999999999999999999988654322112236799999999999999
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHH
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (950)
||+++++|++|+++||+++|+||||+.||.++|+++||. ++.+++|++++.++++++.+.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 347999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (950)
Q Consensus 742 V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (950)
|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|+++|||.+|++++++||++|+||+|+++|++
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHH
Q 002230 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 901 (950)
Q Consensus 822 ~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~ 901 (950)
+.|+..++..+++.++..+.||+|+|+||+|+++| +|+++|++|||++++|+|||+ ++...+.+.|+..-+..+++.+
T Consensus 708 s~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~~~~~ 785 (902)
T PRK10517 708 SSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISSIFDI 785 (902)
T ss_pred HhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888877776668999999999999999 689999999999999999997 3333344444332222232222
Q ss_pred HHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccCC
Q 002230 902 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949 (950)
Q Consensus 902 ~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~~ 949 (950)
..++++++ .++...+......+|..|.+++++|+||.+|||+-.
T Consensus 786 ~~~~~~~~----~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~ 829 (902)
T PRK10517 786 LTFCLMWW----VFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR 829 (902)
T ss_pred HHHHHHHH----HccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 22222211 112110000012344559999999999999999853
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-126 Score=1175.42 Aligned_cols=758 Identities=25% Similarity=0.350 Sum_probs=645.4
Q ss_pred cCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCC
Q 002230 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~ 198 (950)
.+++++.+.|+++. .||++++ +.+|+++||+|+++.++.+++|+.++++|+++++++|+++++++++.+
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 36888999999986 6999987 999999999999999988999999999999999999999999998875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEe------CCeEEEEecCCcCCCcEEEeCCCCeecc
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~g~~~~I~~~dLvvGDiV~l~~Gd~vPa 272 (950)
.|++++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 5888998888888888888899998888888887754 45899999 9999999999999999999999999999
Q ss_pred cEEEEeecceEEEcccccCCCCcccccCCC------------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCC
Q 002230 273 DGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (950)
Q Consensus 273 Dgill~g~~l~VDeS~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (950)
||++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|++.+++.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999997543 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHH
Q 002230 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (950)
Q Consensus 341 ~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav 420 (950)
.+++|+|++++++++++..+++++++++++++.. . .+ .+...+..++++++++||||||+++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHH
Confidence 6679999999999999999888877766655321 0 01 2456788899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHH
Q 002230 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (950)
Q Consensus 421 ~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (950)
+++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... + ..++
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~----------------~--~~~~ 368 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE----------------T--SERV 368 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC----------------C--HHHH
Confidence 999999999999999999999999999999999999999999999999887521110 0 1122
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEE
Q 002230 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (950)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~ 580 (950)
+.. .+.|+.. . ...+||+|.|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++
T Consensus 369 l~~-a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~ 436 (867)
T TIGR01524 369 LKM-AWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC 436 (867)
T ss_pred HHH-HHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEE
Confidence 222 2333221 1 1157999999999986532 22334567888999999999999999886655688999
Q ss_pred cCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCC
Q 002230 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (950)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (950)
||+||.++++|+++. .+|...+++++.++++++.+++|+++|+|++++|||+++.++.......+++++++|+++++||
T Consensus 437 KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 437 KGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred eCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCC
Confidence 999999999998764 4677788999888899999999999999999999998865432111223678999999999999
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+||+++++|++|+++||+++|+|||+..||.++|+++||.. +.+++|.+++.++++++.+.++++.||||++|+||.+
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999964 3689999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820 (950)
Q Consensus 741 ~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~ 820 (950)
+|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|+++|||++|++++++||++|+||+|+++|+
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ 671 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMT 671 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHH
Q 002230 821 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900 (950)
Q Consensus 821 l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~ 900 (950)
++.|+..++..+++.++..+.||+++|+||+|+++| +|+++|++|||++++|++||+ ++++.+.+.+ +..+++.
T Consensus 672 ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~----~~~g~~~ 745 (867)
T TIGR01524 672 ASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFM----LCIGPVS 745 (867)
T ss_pred HhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHH----HHHHHHH
Confidence 999999988888777776668999999999999999 699999999999999987666 6665544443 3344443
Q ss_pred HHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 901 ~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+++.+..++.....+...+.......+|..|.+++++|+||.||||+-
T Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~ 793 (867)
T TIGR01524 746 SIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTE 793 (867)
T ss_pred HHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcC
Confidence 322222111111111111111111247888999999999999999975
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-125 Score=1176.17 Aligned_cols=770 Identities=32% Similarity=0.458 Sum_probs=658.7
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhccccCCC--CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEe
Q 002230 167 VWEALHDMTLMILAVCALVSLVVGIATEGWP--KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (950)
Q Consensus 167 ~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~--~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (950)
++++|+++++++|++++++|++++...++.+ ..|+|++.|++.+++...++.+++++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 4789999999999999999999987653332 579999999999999999999999999999999876 4566899999
Q ss_pred CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCC------------CCeEEeccEEe
Q 002230 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (950)
Q Consensus 245 ~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~------------~~~l~sGt~v~ 312 (950)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999643 37899999999
Q ss_pred eceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCc
Q 002230 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (950)
Q Consensus 313 ~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~ 392 (950)
+|+++++|++||.+|+.|++.+++..++.++||+|+++++++..+..+++++++++++++...+... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999888889999999999999998888777777666543322110 000 01
Q ss_pred chHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEE
Q 002230 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (950)
Q Consensus 393 ~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (950)
....+..++..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245566778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eccee------eeccCCCCCCCC---C-----CCCChHHHHHHHHHHHhcCCCceeecCC-CceeecCChhhhHHHHHHH
Q 002230 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGEG-NKTEILGTPTETAILEFGL 537 (950)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~g~p~e~All~~a~ 537 (950)
..++. +...+....+.. . ....+...+.+.....+|+++.+..+++ +.+...|||+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111111100 0 0001223444556677777776654322 2344579999999999999
Q ss_pred HcCCChHH----------------HhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCee
Q 002230 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (950)
Q Consensus 538 ~~g~~~~~----------------~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (950)
+.|.+... .++.+++++.+||+|+||||+++++.+ +++.+|+|||||.|++.|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88876442 245677999999999999999999864 6688999999999999999988777888
Q ss_pred ecCCHHHHHHHHHHHHHHHh-cccceeEEEEEEcCCCCC-------CCCCCCCCceEEEeeeeccCCCCccHHHHHHHHH
Q 002230 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (950)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~-~glR~l~~A~~~~~~~~~-------~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~ 673 (950)
.|++++.++++++.+++|++ +|+||+++|||.++.+.. ...+.+|++++|+|+++++||+|++++++|+.|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999865311 1123468899999999999999999999999999
Q ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhC
Q 002230 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (950)
Q Consensus 674 ~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (950)
++|++++|+|||+..||.++|+++|+..++. ..++|+++..++++++.+..++..||||++|+||.++|+.+|+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (950)
Q Consensus 750 g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~ 829 (950)
|++|+|+|||.||+|||++|||||||| +|++++|++||+++.+|||.+|+++++|||++|+||+|+++|++++|+..++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (950)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~ 909 (950)
+.+++.++..+.||+++|++|+|+++|.+|+++|++|||++++|++||+.++++++++.+|+.|++++++|+++.+..++
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888999999999999999999999999999999999999999999999999999999999999977544332
Q ss_pred hcc---cccc--------cC---CC-----CcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 910 RGK---AVFR--------LD---GP-----DPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 910 ~~~---~~~~--------~~---~~-----~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+.. .+.. .+ +. +.....+|++|++||+||+||.||||+.
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~ 846 (917)
T TIGR01116 789 WWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE 846 (917)
T ss_pred HHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC
Confidence 211 1111 01 00 0124568999999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-118 Score=1089.23 Aligned_cols=718 Identities=24% Similarity=0.361 Sum_probs=611.5
Q ss_pred CCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHH
Q 002230 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (950)
Q Consensus 135 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~ 214 (950)
||++++ +++|+++||+|+++. +.+++|+.++++|+++++++++++++++++++ .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 888877 999999999999987 45667899999999999999999999999886 5888988888888888
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCC
Q 002230 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (950)
Q Consensus 215 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~ 294 (950)
.+..+++++.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888898888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred cccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (950)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~ 374 (950)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+.+.+++|+|+.+++++.++.++.+++++++++++..
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765 69999999999999999999999999999999998888889999999999999988888877777665432
Q ss_pred HHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEe
Q 002230 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (950)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (950)
. . + .++...+..++++++++|||+||+++|++++.++++|+|+|++||+++++|+||++|+||
T Consensus 228 ~--~-----~----------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 G--R-----G----------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred H--c-----C----------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 1 0 0 035567888999999999999999999999999999999999999999999999999999
Q ss_pred eCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHH
Q 002230 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (950)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (950)
||||||||+|+|+|.+++..++.+ +++ +++..+.. |+. ..++||+|.|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~~---------------~~~--~~l~~a~~-~~~-----------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNGF---------------DKD--DVLLYAAL-ASR-----------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCCC---------------CHH--HHHHHHHH-hCC-----------CCCCChHHHHHHH
Confidence 999999999999999988643210 111 22322322 221 1267999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCC-CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHH
Q 002230 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (950)
Q Consensus 535 ~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (950)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++.+.++||+||.+++.|+.. ++.+++++
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886532 23456788899999999999999987654 667788999999999999742 34556788
Q ss_pred HHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 002230 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (950)
Q Consensus 614 ~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~i 693 (950)
+.+++++++|+|++++|||+ .+++++++|+++++||+||+++++|++|+++||+++|+|||++.||.++
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999973 1468999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 694 a~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
|+++||... ...+.+|.+.+.++++++.+.+.++.||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999652 2234556666788999999999999999999999999999999999 999999999999999999999
Q ss_pred cceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHH
Q 002230 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLW 850 (950)
Q Consensus 771 vGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~ 850 (950)
|||||| +|+|+||++||+|+++|||.+|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|+||
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~ 632 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVI 632 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHH
Confidence 999999 89999999999999999999999999999999999999999999999998877776665544 4699999999
Q ss_pred HHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc---ccccCCC-Cccccc
Q 002230 851 VNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA---VFRLDGP-DPDLIL 926 (950)
Q Consensus 851 ~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~~ 926 (950)
+|+++|. +++++++|++++. |+|. ...+ +.+++.++..+++.++..+.++++... ++...+. ......
T Consensus 633 ~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (755)
T TIGR01647 633 IAILNDG-TIMTIAYDNVKPS---KLPQ---RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNL 704 (755)
T ss_pred HHHHHhH-hHhhccCCCCCCC---CCCC---ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhh
Confidence 9999997 6999999998752 4443 3333 367777777787777665555433221 1111111 112356
Q ss_pred chHHhHHHHHHHHHHHHhcccC
Q 002230 927 NTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 927 ~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+|+.|.++++.|+||.|++|+-
T Consensus 705 ~t~~f~~~~~~~~~~~~~~r~~ 726 (755)
T TIGR01647 705 QSLIYLQVSISGQATIFVTRTH 726 (755)
T ss_pred HHHHHHHHHHHHHHHHheeccC
Confidence 8999999999999999999975
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-114 Score=1092.73 Aligned_cols=751 Identities=23% Similarity=0.322 Sum_probs=602.8
Q ss_pred cCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHH
Q 002230 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (950)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~ill 212 (950)
..||+.++ +.+|++.||+|+++.+ .++||+++++++.+|++++++++.++.+.- +.|++++.|++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46999887 9999999999999875 589999999999999998887775554432 257888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeC--CCCeecccEEEEeecceEEEccccc
Q 002230 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (950)
Q Consensus 213 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~--~Gd~vPaDgill~g~~l~VDeS~LT 290 (950)
...++...+++..++.+++. .++..++|+|||++++|+++||||||||.|+ +||+|||||+|++|+ |.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 65555555555444444432 2456899999999999999999999999999 999999999999995 899999999
Q ss_pred CCCCcccccCC-----------------CCeEEeccEEee-------ceEEEEEEEEeeccchhhHhhhhcCCCCCCChh
Q 002230 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (950)
Q Consensus 291 GEs~pv~k~~~-----------------~~~l~sGt~v~~-------G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tpl 346 (950)
|||.|+.|.+. ++++|+||.|.+ |.+.++|++||.+|..|++.+++..+...++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999641 347999999985 789999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 002230 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (950)
Q Consensus 347 q~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~ 426 (950)
++...++...+..+ +++.+++++...+.. +. .+...+..++++++++|||+||+++++++++
T Consensus 363 ~~~~~~~~~~l~~~----a~i~~i~~~~~~~~~----~~----------~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLAVL----ALIGFIYTIIELIKD----GR----------PLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHc----CC----------cHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 88877765554333 333333222211111 11 3567788899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHH
Q 002230 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (950)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (950)
+++||+++|++||++.++|++|++|++|||||||||+|+|+|.+++..+........ . ..........+..+++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI-----V-TEDSSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc-----c-ccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999875432110000 0 0000011223445667
Q ss_pred hcCCCceeecCCCceeecCChhhhHHHHHHHHc-CC--C--hHH----------HhhhcceEEEecCCCCCceEEEEEEc
Q 002230 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (950)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g~--~--~~~----------~~~~~~i~~~~pF~s~~k~msvvv~~ 571 (950)
.||+..... + ...|||+|.|+++++... .. + ... ....+++++.+||+|++|||||+++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 777654332 2 568999999999986311 10 0 000 02467889999999999999999986
Q ss_pred CC-CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC-----CCCCCCC
Q 002230 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (950)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~-----~~~~~~~ 645 (950)
++ +++++++|||||.|+++|+.. ..++++.+.+++|+++|+|||++|||++++.. ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 54 467899999999999999741 12356788899999999999999999987431 1123457
Q ss_pred CCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 002230 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (950)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (950)
|+|++|+|+++|+||+||+++++|++|+++||+++|+||||+.||.++|++|||..++.
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 89999999999999999999999999999999999999999999999999999975431
Q ss_pred --------------------------------eeeeCccccc---CCHHHHhhhhccccEEeecChhhHHHHHHHHhhhC
Q 002230 705 --------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (950)
Q Consensus 705 --------------------------------~vi~g~~~~~---~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (950)
.+++|+++.. +.++++.+++.++.||||++|+||.++|+.+|+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 4677777654 4567888899999999999999999999999998
Q ss_pred CCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (950)
Q Consensus 750 g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~ 829 (950)
|++|+|||||+||+||||+|||||||| . .|+ ..+||+++.+|+|++|+++|+|||+++.|++++++|.+.++++..+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~ 877 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 3 354 4899999999999999999999999999999999999999988755
Q ss_pred HHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (950)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~ 909 (950)
..++ ++...+||+++|+||+|++++++++++|+.++|.+++|++|| .++++++.++..+++|+++++++.++.++
T Consensus 878 ~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~ 952 (1054)
T TIGR01657 878 SVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVF 952 (1054)
T ss_pred HHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 233458999999999999999999999999999999999999 47999999999999999999988877765
Q ss_pred hccc--ccc------cCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 910 RGKA--VFR------LDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 910 ~~~~--~~~------~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
.... ++. .++...+...+|++| .++.+|.++.+++|..
T Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~ 998 (1054)
T TIGR01657 953 ELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK 998 (1054)
T ss_pred HHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC
Confidence 4321 221 111111223479999 6777777777888765
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-116 Score=989.93 Aligned_cols=804 Identities=31% Similarity=0.433 Sum_probs=683.5
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc---
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~--- 193 (950)
+...++++++++.+|..+||+.++ +.+++.+-|+|.+++|+..+-|..+.+|++...-++++++|+++++-+...
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456799999999999999999987 999999999999999999999999999999999999999999887654321
Q ss_pred -cC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh---hhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCC
Q 002230 194 -EG-WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (950)
Q Consensus 194 -~~-~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~---~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd 268 (950)
+. .+...|-+. .+..+++++.+..|.|+.+-.+..+ ...+..++|+|||+.+.+...||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 11 122333332 2333445555666666655444433 34567899999999999999999999999999999
Q ss_pred eecccEEEEeecceEEEcccccCCCCcccccC---------CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCC
Q 002230 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (950)
Q Consensus 269 ~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~---------~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (950)
+||||.+++++..|++|+|+|||||+|.++++ ..++-|.+|.+.+|.++++|.+||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999998852 245789999999999999999999999999999998888
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHH
Q 002230 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (950)
Q Consensus 340 ~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~la 419 (950)
+..++|++..++++..++..+++++++..|++.++. +. .++.++...+.++|..+|+||+..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhhhheeEEecCcCCccce
Confidence 888999999999999999888888877777553321 11 456777778899999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHH
Q 002230 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (950)
Q Consensus 420 v~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (950)
+|.+++...+||.+++++||++.+.|+||+.++||+|||||||+|+|+|.++|.++.....+.............+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999988776544322222212222344556
Q ss_pred HHHHHHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCC--
Q 002230 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (950)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~-- 573 (950)
.+....++|+.+....++.+ +....|++.|.||++++...-.+....|+..+.+..+||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 67778888888887766554 345689999999999998776667788899999999999999999877777543
Q ss_pred -CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC--------CCCCCC
Q 002230 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (950)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~--------~~~~~~ 644 (950)
..+.+..|||||.++++|+.+. .+|+..|++++.++.+++...++...|-||++|+++.++++. .+..+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4678889999999999999875 578889999999999999999999999999999999887551 123356
Q ss_pred CCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--------------------
Q 002230 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (950)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~-------------------- 704 (950)
+..++.|+|++++-||+|..+++|+..|++|||+|+|+|||++.||++||++.||..++.
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999876432
Q ss_pred ----eeeeCcccccCCHHHHhhhhccc--cEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCC
Q 002230 705 ----IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (950)
Q Consensus 705 ----~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~ 778 (950)
.|++|.++..++++++++++.+. -||||.||+||+.+|+..|+. |.+|+++|||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 68999999999999999998443 399999999999999999999 99999999999999999999999999999
Q ss_pred CcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHH
Q 002230 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTL 858 (950)
Q Consensus 779 g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l 858 (950)
|+|++|++||++|+||||++|+..+++||.+|+|++|.|.|.++.|+..+...+++.+++.+.|+.++++|++.+..|+.
T Consensus 734 GSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmv 813 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIV 813 (1019)
T ss_pred cchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCccccccCCCC-CCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHhc--------ccccccCC----C----
Q 002230 859 GALALATEPPNGDLMKRSPVG-RKGNFISNVMWRNILGQ-SLYQFLIIWYLQTRG--------KAVFRLDG----P---- 920 (950)
Q Consensus 859 ~~lal~~e~p~~~l~~~~P~~-~~~~li~~~~~~~i~~~-~~~~~~~~~~l~~~~--------~~~~~~~~----~---- 920 (950)
||++||+|+|+.++|+|+|+. +++.|+|.+....-.+| +++|++..|+-+|.. ..++++.. .
T Consensus 814 PAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~D 893 (1019)
T KOG0203|consen 814 PAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVND 893 (1019)
T ss_pred hhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhh
Confidence 999999999999999999996 88999998876554444 577777666655421 11122110 0
Q ss_pred --Cc-------------ccccchHHhHHHHHHHHHHHHhcc
Q 002230 921 --DP-------------DLILNTLIFNTFVFCQVCLSTCIR 946 (950)
Q Consensus 921 --~~-------------~~~~~t~~F~~~v~~q~~n~~~~r 946 (950)
++ +-..+|..|.++|++|+++.+.|.
T Consensus 894 l~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~K 934 (1019)
T KOG0203|consen 894 LTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICK 934 (1019)
T ss_pred hhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhh
Confidence 00 113689999999999999999875
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-107 Score=1024.22 Aligned_cols=733 Identities=24% Similarity=0.337 Sum_probs=596.4
Q ss_pred cCCCccCCCCCccH---HHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (950)
Q Consensus 150 ~G~N~~~~~~~~~f---~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~ 226 (950)
|.+|.+...++..+ ++.+|+||+++.+++|++++++++++.+++. +..+.++|+++++++++++++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56799887776665 5899999999999999999999999877542 2445677889999999999999999
Q ss_pred HHHHhHhhhcCCeEEEEeC-CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecc----eEEEcccccCCCCcccccCC
Q 002230 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (950)
Q Consensus 227 ~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~----l~VDeS~LTGEs~pv~k~~~ 301 (950)
++++.+++.++..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ |.||||+|||||.|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9999999999999999997 899999999999999999999999999999999765 89999999999999988421
Q ss_pred -----------------------------------------------CCeEEeccEEee-ceEEEEEEEEeeccchhhHh
Q 002230 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (950)
Q Consensus 302 -----------------------------------------------~~~l~sGt~v~~-G~~~~~V~~~G~~T~~g~i~ 333 (950)
++++++||.+.+ |++.++|++||.+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~--- 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLM--- 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhh---
Confidence 256889999998 99999999999999654
Q ss_pred hhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccC-----CcchHHHHHHHHHHHHHH
Q 002230 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (950)
Q Consensus 334 ~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~il 408 (950)
.+....+.+++++++++|++..++..+.++++++++++. .++........|+.. ......++..|..++.++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGA---GIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHH---HheecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 455566778899999999998887776666665554432 111110011112211 011123444667788889
Q ss_pred HHHhcCchHHHHHHHHHHHH------HHHhcc----ccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceee
Q 002230 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (950)
Q Consensus 409 vvavP~~L~lav~l~l~~~~------~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (950)
+.++|++|+..++++.+..+ .+|+++ +++||+++++|+||++++||+|||||||+|+|+++++++++..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999988 788875 49999999999999999999999999999999999999988876
Q ss_pred eccCCC-------CCC-----C----CC-----------------CCCChHHHHHHHHHHHhcCCCceeecCC--C-cee
Q 002230 479 EVDNSK-------GTP-----A----FG-----------------SSIPASASKLLLQSIFNNTGGEVVIGEG--N-KTE 522 (950)
Q Consensus 479 ~~~~~~-------~~~-----~----~~-----------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~-~~~ 522 (950)
...... ... . .. .....+....+..+++.||++....+++ + ..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 522110 000 0 00 0000112233556778888776654222 2 224
Q ss_pred ecCChhhhHHHHHHHHcCCChHH--------------HhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHH
Q 002230 523 ILGTPTETAILEFGLLLGGDFQA--------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (950)
Q Consensus 523 ~~g~p~e~All~~a~~~g~~~~~--------------~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il 588 (950)
..+||+|.||++++...|+.+.. ....+++++++||+|+||||||+++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 47999999999999998876532 2246889999999999999999999888889999999999999
Q ss_pred HhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC--------------C--------CCCCC
Q 002230 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------------D--------APIPT 646 (950)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~--------------~--------~~~~e 646 (950)
++|+. .+++.++.+.+.+++|+.+|+||+++|||.++++... + .+.+|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 1234567788999999999999999999999754100 0 13468
Q ss_pred CceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------
Q 002230 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (950)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~---------------------- 704 (950)
+|++|+|+++++||+|+|++++|+.|++|||++||+|||+.+||.+||++|||..++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986542
Q ss_pred -------------------eeeeCcccccCCHH----HHhhhhccc--cEEeecChhhHHHHHHHHhhhCCCEEEEEcCC
Q 002230 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (950)
Q Consensus 705 -------------------~vi~g~~~~~~~~~----~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG 759 (950)
++++|+++..+.++ ++.+++.++ .||||++|+||.++|+.+|+..|++|+|+|||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 36777777654433 344455444 49999999999999999998668999999999
Q ss_pred ccCHHhhhcCCcceeecCCCcH--HHHhcCCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002230 760 TNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (950)
Q Consensus 760 ~ND~~al~~AdvGiamg~~g~~--~ak~~aDivl~~~~~~~i~~~i-~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~ 836 (950)
+||+|||++||||| |+.|+| .|+++||+++.+ |..+.+++ .|||++|.|++++++|++++|++.+++.+++.+
T Consensus 778 ~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 778 ANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 556788 489999999986 99999987 889999999999999999999999999999888
Q ss_pred hcC---CCChhHHHHHHHHHHHHHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 002230 837 LTG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYL 907 (950)
Q Consensus 837 ~~~---~~pl~~~qll~~nli~d~l~~lal~~--e~p~~~l~~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~l 907 (950)
+++ .+|+++++++|+|+++|++|++++|. +++++++|.++|+ +++.++++...+..|++.++||+++++++
T Consensus 854 ~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~ 933 (1057)
T TIGR01652 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFF 933 (1057)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 654 45889999999999999999999986 6777889999997 66778888887777888999999988776
Q ss_pred HH
Q 002230 908 QT 909 (950)
Q Consensus 908 ~~ 909 (950)
.+
T Consensus 934 ~~ 935 (1057)
T TIGR01652 934 PM 935 (1057)
T ss_pred HH
Confidence 54
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-100 Score=951.70 Aligned_cols=735 Identities=21% Similarity=0.292 Sum_probs=583.4
Q ss_pred hhcCCCccCCCCCccHH----HHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 002230 148 EIYGINKFTESPARGFW----VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYK 223 (950)
Q Consensus 148 ~~~G~N~~~~~~~~~f~----~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~ 223 (950)
..|..|.+...++. +| +.+|+||++..++++++++++++++.+++. ...+.++|+++++++++++++.
T Consensus 85 ~~f~~N~i~TsKYt-~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 85 FEFAGNSIRTAKYS-VFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred ccCCCCeeeccccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHH
Confidence 36899999777653 33 668999999999999999999999887542 2445678999999999999999
Q ss_pred HHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecc----eEEEcccccCCCCccccc
Q 002230 224 QSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVN 299 (950)
Q Consensus 224 ~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~----l~VDeS~LTGEs~pv~k~ 299 (950)
++.++++.++..|+..++|+|+|.+++++|.||+|||+|.|++||+|||||+++++++ |+||||+|||||.|+.|.
T Consensus 157 Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~ 236 (1178)
T PLN03190 157 EDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRY 236 (1178)
T ss_pred HHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEec
Confidence 9999999999999999999999999999999999999999999999999999999544 899999999999999883
Q ss_pred CC--------------------------------------------CCeEEeccEEee-ceEEEEEEEEeeccchhhHhh
Q 002230 300 AL--------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLMA 334 (950)
Q Consensus 300 ~~--------------------------------------------~~~l~sGt~v~~-G~~~~~V~~~G~~T~~g~i~~ 334 (950)
.. ++++++||.+.+ .++.++|++||.+| |++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~ 313 (1178)
T PLN03190 237 AKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAML 313 (1178)
T ss_pred ccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhh
Confidence 11 245777777776 47999999999999 5777
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcc--ccCCc---------c--h----HHH
Q 002230 335 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW--TWSGD---------D--A----LEI 397 (950)
Q Consensus 335 ~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~--~~~~~---------~--~----~~~ 397 (950)
+...+..+.+++++++|++..++..+.+++++++.++... +.... ....| .|... . . ...
T Consensus 314 N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~--~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1178)
T PLN03190 314 NNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV--WLRRH-RDELDTIPFYRRKDFSEGGPKNYNYYGWGWEI 390 (1178)
T ss_pred cCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh--hhccc-cccccccccccccccccccccccccchhhHHH
Confidence 7777778899999999999888777666666555443211 11110 01111 11100 0 0 011
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccc----------cccccchhhhccCCeeEEeeCCccccccCceE
Q 002230 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMT 467 (950)
Q Consensus 398 ~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~----------ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~ 467 (950)
+..|..++.++...+|++|+..+.++....+..|.+|. +.||+.+.+|+||++++||+|||||||+|+|+
T Consensus 391 ~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~ 470 (1178)
T PLN03190 391 FFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 470 (1178)
T ss_pred HHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEE
Confidence 22233445566688999999999999977677776655 78999999999999999999999999999999
Q ss_pred EEEEEEcceeeeccCCC-------------C---CCCCC------------CCCC-h--HHHHHHHHHHHhcCCCceeec
Q 002230 468 VLKACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIG 516 (950)
Q Consensus 468 v~~~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~ 516 (950)
++++++++..|+.+... . .+... .... + .....+..++++||++.....
T Consensus 471 fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~ 550 (1178)
T PLN03190 471 FQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVV 550 (1178)
T ss_pred EEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeecc
Confidence 99999988776421100 0 00000 0000 0 112335567888888766422
Q ss_pred CC--C----ce-eecCChhhhHHHHHHHHcCC------------ChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEE
Q 002230 517 EG--N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR 577 (950)
Q Consensus 517 ~~--~----~~-~~~g~p~e~All~~a~~~g~------------~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~ 577 (950)
++ + .. +.++||+|.||+++|.+.|+ +....+..+++++++||+|+||||||+++.+++.+.
T Consensus 551 ~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~ 630 (1178)
T PLN03190 551 DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVK 630 (1178)
T ss_pred CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEE
Confidence 11 1 12 34569999999999999997 334456789999999999999999999998888899
Q ss_pred EEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC-----------------
Q 002230 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA----------------- 640 (950)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~----------------- 640 (950)
+|+|||||.|+++|+... +++.++++.+.+++||++|+|||++|||+++++...
T Consensus 631 l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 631 VFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 999999999999997532 233566788999999999999999999999753110
Q ss_pred -----CCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------
Q 002230 641 -----DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------- 704 (950)
Q Consensus 641 -----~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------- 704 (950)
..+.+|+|++++|+++++||+|++++++|+.|+++||++||+|||+..||.+||++|||.+++.
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 0134689999999999999999999999999999999999999999999999999999975431
Q ss_pred --------------------------------------eeeeCcccccCCH----HHHhhhhcccc--EEeecChhhHHH
Q 002230 705 --------------------------------------IAIEGPEFREKSD----EELSKLIPKIQ--VMARSSPMDKHT 740 (950)
Q Consensus 705 --------------------------------------~vi~g~~~~~~~~----~~~~~~~~~~~--v~ar~~P~~K~~ 740 (950)
++++|.++..+.+ +++.++..++. ||||++|.||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 4566666665543 34555555544 799999999999
Q ss_pred HHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcH--HHHhcCCEEeccCChhHHHHH-HHHHHHHHHHHHHHH
Q 002230 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFV 817 (950)
Q Consensus 741 ~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~--~ak~~aDivl~~~~~~~i~~~-i~~gR~~~~~i~k~i 817 (950)
+|+.+|+..+++|+|+|||+||+|||++||||| |++|+| .|+.+||+.+.+ |..+.++ +.|||+.|.|+.+.+
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999874589999999999999999999999 778999 589999999987 9999998 479999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC---ChhHHHHHHHHHHHHHHHHHHhcc-CC-CCccccccCCC----CCCCCCcCHH
Q 002230 818 QFQLTVNVVALIVNFSSACLTGNA---PLTAVQLLWVNMIMDTLGALALAT-EP-PNGDLMKRSPV----GRKGNFISNV 888 (950)
Q Consensus 818 ~~~l~~N~~~~~~~~~~~~~~~~~---pl~~~qll~~nli~d~l~~lal~~-e~-p~~~l~~~~P~----~~~~~li~~~ 888 (950)
+|.+++|++..++.|++.++++++ .++.+.+.++|++++.+|.+++|. |. -+++.+.+.|. +++...++..
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 999999999999999998887765 468999999999999999999975 32 23344445553 4556677877
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002230 889 MWRNILGQSLYQFLIIWYLQT 909 (950)
Q Consensus 889 ~~~~i~~~~~~~~~~~~~l~~ 909 (950)
.+..|++.++||++++|++.+
T Consensus 1018 ~F~~w~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1018 LFWLTMIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 766778899999998887654
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-92 Score=833.56 Aligned_cols=547 Identities=24% Similarity=0.357 Sum_probs=442.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhcccc--CC-CCCcchhHHHHHHHHHHHHHHHHHHHHHH----HHHHHhHhhhcCCeEE
Q 002230 169 EALHDMTLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSDYKQS----LQFKDLDREKKKITVQ 241 (950)
Q Consensus 169 ~~~~~~~~~il~i~a~~s~~~~~~~~--~~-~~~~~d~~~i~~~illv~~v~~~~~~~~~----~~~~~l~~~~~~~~v~ 241 (950)
.++++|..++++++++++++++.+.+ +. +..+++++.|++.+++.+++..+.+.+++ ++.+.|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46789999999999999999887533 11 11235677777777777777776644434 3444455433333565
Q ss_pred -EEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCC---CCeEEeccEEeeceEE
Q 002230 242 -VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCK 317 (950)
Q Consensus 242 -V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~---~~~l~sGt~v~~G~~~ 317 (950)
|.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999975 9999999999999999876 65 9999999999999
Q ss_pred EEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHH
Q 002230 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (950)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (950)
++|+++|.+|++|||.+++++++.++||+|..+..+...+. +.++++++++..+.. +. .+
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~----------~~-----~~ 245 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAK----------FL-----NF 245 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHh----------hc-----cH
Confidence 99999999999999999999999889999977665543322 222222222111000 00 12
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEccee
Q 002230 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (950)
Q Consensus 398 ~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (950)
...+..++++.+.+|||+||.+++++++.++++|.++|+++|+++++|+||++|+||||||||||+|++.++++...+.
T Consensus 246 ~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~- 324 (673)
T PRK14010 246 NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS- 324 (673)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-
Confidence 2345677888888999999999999999999999999999999999999999999999999999998777766542111
Q ss_pred eeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEec
Q 002230 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (950)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~p 557 (950)
....+++ .....|+.. +.||+++|+++++.+.+.+.... ..+.+|
T Consensus 325 -----------------~~~~~ll-~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~p 369 (673)
T PRK14010 325 -----------------SSFERLV-KAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIP 369 (673)
T ss_pred -----------------ccHHHHH-HHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceec
Confidence 0112222 222233221 45999999999998776653221 123589
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC
Q 002230 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (950)
Q Consensus 558 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~ 637 (950)
|++++|+|++.++ +. .+.||+++.+++.|+. +|...+. .+++..++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL------- 427 (673)
T ss_pred cccccceeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE-------
Confidence 9999999998753 22 4569999999999974 2222221 25566778999999999876
Q ss_pred CCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 002230 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (950)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (950)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3678999999999999999999999999999999999999999999999999974
Q ss_pred HHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|++||||.
T Consensus 483 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls 549 (673)
T PRK14010 483 -----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPT 549 (673)
T ss_pred -----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (950)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~ 833 (950)
+|++++++||++|.|+++++.|.++.|+..++..+.
T Consensus 550 ~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 550 KLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 999999999999999999999999999987665544
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=822.65 Aligned_cols=543 Identities=25% Similarity=0.353 Sum_probs=442.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhcccc---CC---CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEE
Q 002230 169 EALHDMTLMILAVCALVSLVVGIATE---GW---PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (950)
Q Consensus 169 ~~~~~~~~~il~i~a~~s~~~~~~~~---~~---~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (950)
.+|++++.+++++++++++++++... +. ..+|..++.+++.+++..++.+..+++.+++.+.|.+..++..++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 57889999999999999999886532 11 1223333333333444444555666666677777776555457999
Q ss_pred EeCCe-EEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCC--CeEEeccEEeeceEEEE
Q 002230 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKML 319 (950)
Q Consensus 243 ~R~g~-~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~--~~l~sGt~v~~G~~~~~ 319 (950)
+|||+ +++|++++|+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 899999999999999999999999999999997 599999999999999998654 34999999999999999
Q ss_pred EEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHH
Q 002230 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (950)
Q Consensus 320 V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (950)
|+++|.+|.+|+|.+++++++.++||+|..++.+...+..+.+++++..+.+ .++. + . . .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~~-----g-------~---~--~ 247 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAYS-----G-------G---A--L 247 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHHh-----C-------c---h--H
Confidence 9999999999999999999988899999888877655543332222111111 1110 1 0 1 1
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee
Q 002230 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (950)
Q Consensus 400 ~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (950)
.+..++++++++|||+|+.+.++....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--
Confidence 567789999999999999999999999999999999999999999999999999999999999999999987643221
Q ss_pred ccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHH-cCCChHHHhhhcceEEEecC
Q 002230 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPF 558 (950)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~~~~i~~~~pF 558 (950)
++ +.+....+.++.+ +.||..+|+++++.+ .+.+.. +..++..+.+||
T Consensus 326 --------------~~---~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF 374 (679)
T PRK01122 326 --------------TE---EELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPF 374 (679)
T ss_pred --------------CH---HHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEee
Confidence 11 1123333333321 358999999999876 343321 222456788999
Q ss_pred CCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC
Q 002230 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~ 638 (950)
++.+|+|++.+. + +.+.||++|.+++.|.. +|... .+++++.+++++++|+|++++|+
T Consensus 375 ~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 375 SAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred cCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 999998888542 2 57899999999999963 22221 14567788899999999999993
Q ss_pred CCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHH
Q 002230 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (950)
Q Consensus 639 ~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~ 718 (950)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH
Q 002230 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (950)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~ 798 (950)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|+++||++||+|++||||.+
T Consensus 487 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~ 554 (679)
T PRK01122 487 ----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTK 554 (679)
T ss_pred ----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 799 IVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (950)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~~~l~~N~~ 826 (950)
|+++++|||++.-.--..-.|++. |-+
T Consensus 555 Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 555 LIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred HHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 999999999999777777888876 554
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-88 Score=776.58 Aligned_cols=754 Identities=23% Similarity=0.333 Sum_probs=572.8
Q ss_pred cCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHH
Q 002230 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (950)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~ill 212 (950)
..||+..+ +.+|+..||.|.+.. +.++.+.++.++.-+|+..+. ++|+++|...+ .+|.+..|++.-+.
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ----~fSv~lW~~d~----Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQ----AFSVALWLADS----YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHH----hHHhhhhhccc----chhhhhHHHHHHHH
Confidence 57998876 899999999999965 468899999988888876554 45555665432 34445554443333
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCC-CCeecccEEEEeecceEEEcccccC
Q 002230 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSLTG 291 (950)
Q Consensus 213 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~-Gd~vPaDgill~g~~l~VDeS~LTG 291 (950)
-++++....-.++++.+++-+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccccC
Confidence 334444444444444444433 2358999999999999999999999999998 89999999999996 8999999999
Q ss_pred CCCcccccC------------------CCCeEEeccEEee------ceEEEEEEEEeeccchhhHhhhhcCCCCCCChhH
Q 002230 292 ESEPVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQ 347 (950)
Q Consensus 292 Es~pv~k~~------------------~~~~l~sGt~v~~------G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq 347 (950)
||.|+.|.+ ..+++|+||++.+ +.+.+.|++||.+|..|++.+++..++.. .
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~----~ 379 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV----N 379 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc----c
Confidence 999999952 2357999999974 77999999999999999999999887543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 002230 348 VKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFA 427 (950)
Q Consensus 348 ~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~ 427 (950)
.++-+-+..+.....++|++.|+...+.+... |. .+-..+..++.++.+.+|++||.+.++...++
T Consensus 380 fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~----g~----------~~~~iiirsLDliTi~VPPALPAaltvG~~~a 445 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVIIALIGFIYTAIVLNLL----GV----------PLKTIIIRSLDLITIVVPPALPAALTVGIIYA 445 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHc----CC----------CHHHHhhhhhcEEEEecCCCchhhhhHHHHHH
Confidence 33433333444444445555554433322211 11 34466788899999999999999999999999
Q ss_pred HHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee-------ccCCCCC--CCCCCCCChHHH
Q 002230 428 MKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-------VDNSKGT--PAFGSSIPASAS 498 (950)
Q Consensus 428 ~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~ 498 (950)
.+||.|+||.|-+++.+...|+++++|||||||||++.+.+..+........ ....... .....+......
T Consensus 446 ~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 525 (1140)
T KOG0208|consen 446 QSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPM 525 (1140)
T ss_pred HHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCch
Confidence 9999999999999999999999999999999999999999988776332100 0000000 000000001112
Q ss_pred HHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHc-------CCCh------------------HHHh----hh
Q 002230 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-------GGDF------------------QAER----QA 549 (950)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-------g~~~------------------~~~~----~~ 549 (950)
..+..+++.||+-....+ ...|+|.|.-+.+...-- +... .... ..
T Consensus 526 ~~~~~a~atCHSL~~v~g-----~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~ 600 (1140)
T KOG0208|consen 526 GNLVAAMATCHSLTLVDG-----TLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGE 600 (1140)
T ss_pred HHHHHHHhhhceeEEeCC-----eeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcc
Confidence 346677888875433322 456777776665533100 0000 0000 14
Q ss_pred cceEEEecCCCCCceEEEEEEcC-CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeE
Q 002230 550 SKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLC 628 (950)
Q Consensus 550 ~~i~~~~pF~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~ 628 (950)
+.+++.+||+|.-+||||++..+ +....+|+|||||.|.+.|+. +.+| ..+++.++.|+.+|+|++|
T Consensus 601 ~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tvP------~dy~evl~~Yt~~GfRVIA 668 (1140)
T KOG0208|consen 601 ISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETVP------ADYQEVLKEYTHQGFRVIA 668 (1140)
T ss_pred eEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccCC------ccHHHHHHHHHhCCeEEEE
Confidence 77999999999999999999976 467899999999999999974 2223 4588999999999999999
Q ss_pred EEEEEcCCCC-----CCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 002230 629 LACMEIGNEF-----SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (950)
Q Consensus 629 ~A~~~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~ 703 (950)
+|+|.++... ...++..|.|++|+|++.|++++|++++.+|++|++|.||++|+||||..||..+||+||++.+.
T Consensus 669 lA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~ 748 (1140)
T KOG0208|consen 669 LASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQ 748 (1140)
T ss_pred EecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCC
Confidence 9999998761 23457789999999999999999999999999999999999999999999999999999998653
Q ss_pred c-------------------------------------------------------eeeeCcccccC---CHHHHhhhhc
Q 002230 704 G-------------------------------------------------------IAIEGPEFREK---SDEELSKLIP 725 (950)
Q Consensus 704 ~-------------------------------------------------------~vi~g~~~~~~---~~~~~~~~~~ 725 (950)
. .+++|+.|+.+ ..+.+.+++.
T Consensus 749 ~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~ 828 (1140)
T KOG0208|consen 749 VKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILL 828 (1140)
T ss_pred CeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHh
Confidence 2 45566665543 3566777888
Q ss_pred cccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
+..||||++|.||.++|+.||+. |..|+|+|||+||+.|||+||+||+++. ..|.-||.+.-.-.+.+++.++|++
T Consensus 829 ~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrE 904 (1140)
T KOG0208|consen 829 KGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIRE 904 (1140)
T ss_pred cCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhh
Confidence 99999999999999999999988 9999999999999999999999999872 2356778999888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCc
Q 002230 806 GRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFI 885 (950)
Q Consensus 806 gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li 885 (950)
||+....--..++|...|.++..+..+ .++....-++..|.|+++++..++-+++++..+|.++|-..|| +..|+
T Consensus 905 GRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~ 979 (1140)
T KOG0208|consen 905 GRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLL 979 (1140)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Ccccc
Confidence 999999998899998877766443332 2344567899999999999999999999999999999988877 57899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcc--cccccCCC----CcccccchHHhHHHHHHHHHHHHh
Q 002230 886 SNVMWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGP----DPDLILNTLIFNTFVFCQVCLSTC 944 (950)
Q Consensus 886 ~~~~~~~i~~~~~~~~~~~~~l~~~~~--~~~~~~~~----~~~~~~~t~~F~~~v~~q~~n~~~ 944 (950)
++......++|.++..++.+++++.+. +|+.-... +-.....|.+|..--|.-+|+.+-
T Consensus 980 s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v 1044 (1140)
T KOG0208|consen 980 SKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALV 1044 (1140)
T ss_pred ccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhee
Confidence 999999999998888888777766543 34432111 122345677777777777777654
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-87 Score=788.04 Aligned_cols=545 Identities=26% Similarity=0.369 Sum_probs=449.0
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhccc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeE
Q 002230 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (950)
Q Consensus 169 ~~~~~~~~~il~i~a~~s~~~~~~~--~~---~~~~~~d~~---~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v 240 (950)
.||+|+.++++++++++++++++.. .+ ...+||++. .+++.+++..++.+..+++.++++++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4789999999999999999987642 11 113588753 334445566667778888888888888876555568
Q ss_pred EEEe-CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCC--eEEeccEEeeceEE
Q 002230 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (950)
Q Consensus 241 ~V~R-~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~--~l~sGt~v~~G~~~ 317 (950)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++. .+|+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 6999999999999999987753 49999999999999
Q ss_pred EEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHH
Q 002230 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (950)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (950)
++|+++|.+|++|+|.+++++++.++||+|..++.+..++..+.++ +++.+|.... |... .
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~------------~~~~---~- 247 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA------------YGGN---A- 247 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH------------hcCh---h-
Confidence 9999999999999999999999888999998888776554332221 1122221110 0010 1
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEccee
Q 002230 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (950)
Q Consensus 398 ~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (950)
..+..++++++++|||+|+...+.....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 -~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 248 -ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred -HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 1356678899999999888888777778999999999999999999999999999999999999999999988753211
Q ss_pred eeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEec
Q 002230 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (950)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~p 557 (950)
+. .+ +...++.++. .+.||.++|+++++.+.+.+... ..++..+..|
T Consensus 327 ----------------~~--~~-ll~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ----------------DE--KT-LADAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ----------------cH--HH-HHHHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 11 12 2233333322 14689999999999887654322 1234567899
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC
Q 002230 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (950)
Q Consensus 558 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~ 637 (950)
|++.+|+|++.+. ++ +.++||++|.+++.|.. +|...+ .++++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888877543 22 46899999999988852 222221 3467778899999999999994
Q ss_pred CCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 002230 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (950)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (950)
+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
+++|++|+||..+|+.+|++ |+.|+|+|||.||+|||++|||||||| +|+++++++||++++||||.
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (950)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~N~~ 826 (950)
+|+++++|||+++.+......|++.-+++
T Consensus 555 ~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 555 KLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999877765
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-88 Score=798.54 Aligned_cols=653 Identities=26% Similarity=0.331 Sum_probs=498.3
Q ss_pred hhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---HHHH
Q 002230 41 FTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLK 116 (950)
Q Consensus 41 ~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~ 116 (950)
.|+.|..+.| .+++.+++++++||+.++++.+.|++. ... ...+...++..||..............+. +.+.
T Consensus 12 ~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~ 88 (713)
T COG2217 12 TCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELL 88 (713)
T ss_pred CcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHH
Confidence 3567888999 999999999999999999999999865 233 56788888999998765111111111110 1122
Q ss_pred HhcCHHHHHH----HhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHH--HHH-HHHHHHHh
Q 002230 117 VHGGVEGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMI--LAV-CALVSLVV 189 (950)
Q Consensus 117 ~~~~v~~l~~----~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~i--l~i-~a~~s~~~ 189 (950)
+...+.++.. .+......|. . ........-.-....-.+.+|++.+|+.++.....| |+. +++.++++
T Consensus 89 ~~~~i~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~ 163 (713)
T COG2217 89 RRLIIAGLLTLPLLLLSLGLLLGA--F---LLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAY 163 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcch--h---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 2222333222 1111111111 0 111100000000001147788899999998765443 222 22233333
Q ss_pred hccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh------hhcCCeEEEEe-CCeEEEEecCCcCCCcEE
Q 002230 190 GIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIV 262 (950)
Q Consensus 190 ~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-~g~~~~I~~~dLvvGDiV 262 (950)
+.+.--.+ .||+..++++.++++ ++|.+++...+..+ ...+..+++++ ||+.++|+++||+|||+|
T Consensus 164 s~~~~~~~-~yf~~aa~ii~l~~~------G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v 236 (713)
T COG2217 164 SLYATLFP-VYFEEAAMLIFLFLL------GRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIV 236 (713)
T ss_pred HHHHHhhh-hHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEE
Confidence 33211111 566766665554443 78888777666433 34567887776 566899999999999999
Q ss_pred EeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCC
Q 002230 263 HLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (950)
Q Consensus 263 ~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~ 342 (950)
.|+|||+||+||++++|++ .||||+|||||.|+.|.+++. +++||.+.+|..+++|+++|.+|.+++|.+++++++..
T Consensus 237 ~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~ 314 (713)
T COG2217 237 LVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314 (713)
T ss_pred EECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhC
Confidence 9999999999999999997 999999999999999999886 99999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHH
Q 002230 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (950)
Q Consensus 343 ~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l 422 (950)
++|.|+..|+++.++++.++++++++|++|.+.. + ..+...+..++++++++|||+|.+++|+
T Consensus 315 Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-------~----------~~~~~a~~~a~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 315 KAPIQRLADRVASYFVPVVLVIAALTFALWPLFG-------G----------GDWETALYRALAVLVIACPCALGLATPT 377 (713)
T ss_pred CchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-------C----------CcHHHHHHHHHhheeeeCccHHHhHHHH
Confidence 9999999999999999999999999998764321 0 0345678899999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHH
Q 002230 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (950)
Q Consensus 423 ~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (950)
++..++.+.+++|+|+|+.+++|+++++|+|+||||||||+|+|+|+++...+. + .++.+.+
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~l-- 439 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLAL-- 439 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHH--
Confidence 999999999999999999999999999999999999999999999999876533 0 1233332
Q ss_pred HHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcC
Q 002230 503 QSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKG 582 (950)
Q Consensus 503 ~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KG 582 (950)
+.+ ++ ..+.||..+|+++++...+... .+..+.+| -.++.-+..+.. +.-|
T Consensus 440 -aAa------lE-------~~S~HPiA~AIv~~a~~~~~~~------~~~~~~i~------G~Gv~~~v~g~~---v~vG 490 (713)
T COG2217 440 -AAA------LE-------QHSEHPLAKAIVKAAAERGLPD------VEDFEEIP------GRGVEAEVDGER---VLVG 490 (713)
T ss_pred -HHH------HH-------hcCCChHHHHHHHHHHhcCCCC------ccceeeec------cCcEEEEECCEE---EEEc
Confidence 211 22 2278999999999888765211 00111222 122222222322 2337
Q ss_pred chHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCC
Q 002230 583 ASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (950)
Q Consensus 583 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr 662 (950)
.+..+.+. +.. .+. ..+..+.+..+|..++.++ .|..++|+++++|++|
T Consensus 491 ~~~~~~~~--------~~~--~~~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R 539 (713)
T COG2217 491 NARLLGEE--------GID--LPL-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELR 539 (713)
T ss_pred CHHHHhhc--------CCC--ccc-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCC
Confidence 76654321 110 110 3445667788898777777 4568999999999999
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHH
Q 002230 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (950)
Q Consensus 663 ~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (950)
|+++++|++||+.|+++.|+||||..+|+++|+++||.. ++|.+.|+||.++|
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V 592 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIV 592 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHH
Confidence 999999999999999999999999999999999999965 99999999999999
Q ss_pred HHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (950)
Q Consensus 743 ~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~ 822 (950)
+.||++ |++|+|+|||.||+|||++|||||||| +|+|+|+++||+++++|++..++++++.+|+++++|++|+.|++.
T Consensus 593 ~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 593 RELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002230 823 VNVVALIVNFSS 834 (950)
Q Consensus 823 ~N~~~~~~~~~~ 834 (950)
||+++++++..+
T Consensus 671 yn~~~iplA~~g 682 (713)
T COG2217 671 YNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-88 Score=816.36 Aligned_cols=737 Identities=24% Similarity=0.341 Sum_probs=585.0
Q ss_pred HHhhcCCCccCCCCCccHH---HHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 002230 146 RKEIYGINKFTESPARGFW---VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (950)
Q Consensus 146 r~~~~G~N~~~~~~~~~f~---~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~ 222 (950)
+...|-.|.+...++..+- +.+|+||++..+++|++.++++.++ +.+ +...+.++|+++|+.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~-------~~~~~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP-------FNPYTTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc-------cCccceeeceeeeehHHHHHHH
Confidence 4458899999877654433 7899999999999999999999998 532 2233456799999999999999
Q ss_pred HHHHHHHHhHhhhcCCeEEEEeCCe-EEEEecCCcCCCcEEEeCCCCeecccEEEEeecc----eEEEcccccCCCCccc
Q 002230 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (950)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~g~-~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~----l~VDeS~LTGEs~pv~ 297 (950)
.++.++++.|++.|+.++.|.|++. ..+..|++|+|||+|++..++.+|||.++++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999875 9999999999999887
Q ss_pred cc----------------------------------------------CCCCeEEeccEEeec-eEEEEEEEEeeccchh
Q 002230 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (950)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~G-~~~~~V~~~G~~T~~g 330 (950)
|. ..++.+++|+++.+. .+.+.|+.+|++|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 61 012357889999874 5899999999999
Q ss_pred hHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC--CCccccCCcc-hHHHHHHHHHHHHH
Q 002230 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQE--GTHWTWSGDD-ALEILEFFAIAVTI 407 (950)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~i 407 (950)
|++.+...++.+++++++.+|.....+..+.++++++..+... ........ +..|+....+ .......|+.++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFA--IWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 6777777788999999999998766655554444443333211 11111111 1112222221 12334556677778
Q ss_pred HHHHhcCchHHHHHHHHHHHHH------HHh----ccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEccee
Q 002230 408 VVVAVPEGLPLAVTLSLAFAMK------KMM----NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (950)
Q Consensus 408 lvvavP~~L~lav~l~l~~~~~------~~~----~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (950)
+...+|.+|...+.+.-.+.+. .|. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+.|..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999888777666553 233 347889999999999999999999999999999999999999887
Q ss_pred eeccCCCCC------C----------C------------CCCCCChHHHHHHHHHHHhcCCCceeecCC--CceeecCCh
Q 002230 478 KEVDNSKGT------P----------A------------FGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (950)
Q Consensus 478 ~~~~~~~~~------~----------~------------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (950)
|....+... . . ..+....+....+..++++||+...+.+++ ...+.+.+|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 754322100 0 0 000012233445667888998877776333 245668999
Q ss_pred hhhHHHHHHHHcCCChHHH------------hhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccc
Q 002230 528 TETAILEFGLLLGGDFQAE------------RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (950)
Q Consensus 528 ~e~All~~a~~~g~~~~~~------------~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (950)
+|.|+++.|++.|..+..+ ...++++++.+|+|.||||||+++.|++++.+|||||+.+|++++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 9999999999999776332 34899999999999999999999999999999999999999999874
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC---------------C-------CCCCCCCCceEEEe
Q 002230 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------S-------ADAPIPTEGYTCIG 653 (950)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~---------------~-------~~~~~~e~~l~~lG 653 (950)
-....++...+++++||.+||||||+|||+++++. . +..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 23456677788999999999999999999998761 1 11256799999999
Q ss_pred eeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------
Q 002230 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (950)
Q Consensus 654 ~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------------------------- 704 (950)
.+++||+|++||+++|+.|++||||+||+|||+.+||.+|+..|++..++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986532
Q ss_pred ------------------eeeeCcccccCCHHH----Hhhhh--ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCc
Q 002230 705 ------------------IAIEGPEFREKSDEE----LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (950)
Q Consensus 705 ------------------~vi~g~~~~~~~~~~----~~~~~--~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ 760 (950)
++|+|+.+....+.+ +.++. ++..+|||++|.||+.+|+..++..+.+++++|||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 344555544322221 22222 566799999999999999999877789999999999
Q ss_pred cCHHhhhcCCcceeecCCCcHH--HHhcCCEEeccCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002230 761 NDAPALHEADIGLAMGIAGTEV--AKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (950)
Q Consensus 761 ND~~al~~AdvGiamg~~g~~~--ak~~aDivl~~~~~~~i~~~-i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~ 837 (950)
||++|+++||||| |++|.|. |..+||+.+.. |.-+-++ +.|||+.|.|+.+++.|.+++|+...++.|++.++
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~ 880 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFF 880 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 6677775 88999999988 8888886 69999999999999999999999999999999887
Q ss_pred cC---CCChhHHHHHHHHHHHHHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 002230 838 TG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQ 908 (950)
Q Consensus 838 ~~---~~pl~~~qll~~nli~d~l~~lal~~--e~p~~~l~~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~l~ 908 (950)
++ +..+..+++.++|++++.+|.+++|. .+.+++.+.+.|. +++..++++..+..|+..++||++++|++.
T Consensus 881 ~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~ 960 (1151)
T KOG0206|consen 881 NGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLP 960 (1151)
T ss_pred CCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeee
Confidence 65 45789999999999999999999986 3445555556664 444556676666667779999999998765
Q ss_pred H
Q 002230 909 T 909 (950)
Q Consensus 909 ~ 909 (950)
+
T Consensus 961 ~ 961 (1151)
T KOG0206|consen 961 Y 961 (1151)
T ss_pred H
Confidence 4
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-82 Score=697.68 Aligned_cols=713 Identities=22% Similarity=0.300 Sum_probs=556.7
Q ss_pred HHHhhcCCCccCCCCCc--cHH-HHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 002230 145 RRKEIYGINKFTESPAR--GFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSD 221 (950)
Q Consensus 145 ~r~~~~G~N~~~~~~~~--~f~-~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~ 221 (950)
.++.+|-+|.+...++. +|+ ..+++||+-+.+.++++.++.++++.+.. | | ..+...++.++.+++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g----~--l~ty~~pl~fvl~itl~ke 146 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-G----Y--LSTYWGPLGFVLTITLIKE 146 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-c----c--hhhhhHHHHHHHHHHHHHH
Confidence 34578888888766543 333 56899999999999999999998876643 2 2 2334567888888999999
Q ss_pred HHHHHHHHHhHhhhcCCeEEEE-eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeec----ceEEEcccccCCCCcc
Q 002230 222 YKQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPV 296 (950)
Q Consensus 222 ~~~~~~~~~l~~~~~~~~v~V~-R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~----~l~VDeS~LTGEs~pv 296 (950)
..++.++++-+++.|+...+++ |+|...+ ++++|+|||+|.++.+++||||.+++.++ +|.|.+-.|+||++.+
T Consensus 147 avdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 147 AVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 9999999998988888888877 7776655 99999999999999999999999999865 3899999999999987
Q ss_pred ccc----------------------------------------------CCCCeEEeccEEeeceEEEEEEEEeeccchh
Q 002230 297 NVN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330 (950)
Q Consensus 297 ~k~----------------------------------------------~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g 330 (950)
.|- .-++.++++|.+.+|.+.++|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 650 0135799999999999999999999999
Q ss_pred hHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHH
Q 002230 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410 (950)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv 410 (950)
+-+.+...++.+-.-++..+|.+.+++....+.++++.... ..+ +. .|..++..++.++..
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-------~g~--~~----------~wyi~~~RfllLFS~ 363 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-------KGF--GS----------DWYIYIIRFLLLFSS 363 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-------hcC--CC----------chHHHHHHHHHHHhh
Confidence 45556667777777888999999998877766666543321 000 11 123345555666667
Q ss_pred HhcCchHHHHHHHHHHHHHHHhcc----ccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCC---
Q 002230 411 AVPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS--- 483 (950)
Q Consensus 411 avP~~L~lav~l~l~~~~~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--- 483 (950)
.+|.+|-..+.++...-.+.+.+| |.+||+.+..|+||++.++.+|||||||+|+|.+++++.+.-.|..+..
T Consensus 364 IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV 443 (1051)
T KOG0210|consen 364 IIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEV 443 (1051)
T ss_pred hceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHH
Confidence 789999988888888877888776 6779999999999999999999999999999999999987544432110
Q ss_pred ------------CCCCC----CCCCCChHHHHHHHHHHHhcCCCceeecCCC-ceeecCChhhhHHHHHHHHcCCChHHH
Q 002230 484 ------------KGTPA----FGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQAE 546 (950)
Q Consensus 484 ------------~~~~~----~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~ 546 (950)
..... .....+..+ .-+.+++++||+.....+++| ..+...+|+|.||++|....|.....+
T Consensus 444 ~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 444 SQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 00000 011122222 334567888888887777664 456689999999999998888654322
Q ss_pred -------------hhhcceEEEecCCCCCceEEEEEEcC-CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHH
Q 002230 547 -------------RQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (950)
Q Consensus 547 -------------~~~~~i~~~~pF~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 612 (950)
..+|+|+++|||+|+.|||+++|+.+ .+++..|.|||+.++....+. -+.+
T Consensus 523 d~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---------------NdWl 587 (1051)
T KOG0210|consen 523 DRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---------------NDWL 587 (1051)
T ss_pred ccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---------------chhh
Confidence 13799999999999999999999976 688999999998776544321 1356
Q ss_pred HHHHHHHHhcccceeEEEEEEcCCCCC---------------C--------CCCCCCCceEEEeeeeccCCCCccHHHHH
Q 002230 613 NETIEKFASEALRTLCLACMEIGNEFS---------------A--------DAPIPTEGYTCIGIVGIKDPMRPGVKESV 669 (950)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~~~~~~~---------------~--------~~~~~e~~l~~lG~~~i~D~lr~~~~~~I 669 (950)
++...+||.+|+|||.+|.|.++++.. + -...+|.|+.++|+.|+||+++++++.++
T Consensus 588 eEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tL 667 (1051)
T KOG0210|consen 588 EEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTL 667 (1051)
T ss_pred hhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHH
Confidence 778899999999999999999986510 0 01256899999999999999999999999
Q ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------------eeeeCccccc---CCHH
Q 002230 670 AICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFRE---KSDE 718 (950)
Q Consensus 670 ~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------------------------~vi~g~~~~~---~~~~ 718 (950)
+.||+|||++||+|||+.+||..||+..++...+. ++|+|+.+.- .-++
T Consensus 668 ElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 668 ELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred HHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999999986542 6788877653 2345
Q ss_pred HHhhhhc--cccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH--HHhcCCEEeccC
Q 002230 719 ELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--AKESADVIILDD 794 (950)
Q Consensus 719 ~~~~~~~--~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~--ak~~aDivl~~~ 794 (950)
|+.++.+ ...|+|||+|.||+++++.+|++.|+.|+++|||.||+.|+++||+|| |+-|.|. |.-|||+.+.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq- 824 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ- 824 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH-
Confidence 6666553 345999999999999999999998999999999999999999999999 6666665 77889999988
Q ss_pred ChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhH---HHHHHHHHHHHHHHHHHhccCC-CC
Q 002230 795 NFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTA---VQLLWVNMIMDTLGALALATEP-PN 869 (950)
Q Consensus 795 ~~~~i~~~i-~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~---~qll~~nli~d~l~~lal~~e~-p~ 869 (950)
|+++.+++ -|||..|+|-.+.-||.+...++...++.++++...+.|..- +.|.-+..+++++|.++|..+. .+
T Consensus 825 -F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~ 903 (1051)
T KOG0210|consen 825 -FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVS 903 (1051)
T ss_pred -HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeeccccc
Confidence 99999985 669999999999999999999999999888877776666544 4466688899999999998744 33
Q ss_pred ccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 002230 870 GDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYL 907 (950)
Q Consensus 870 ~~l~~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~l 907 (950)
+++-...|. -.+...++-+.+..|..-++||+.++.+.
T Consensus 904 ~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g 945 (1051)
T KOG0210|consen 904 ESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYG 945 (1051)
T ss_pred HHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHH
Confidence 333333342 11233445455555666799999887663
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-82 Score=691.77 Aligned_cols=637 Identities=24% Similarity=0.378 Sum_probs=508.1
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCC
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~ 196 (950)
..+.++.+.+.|...-+ ||+++| +++|++.||.|++.+++...|.||+- -|.+|.-|..-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl~-Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFLG-FMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHHH-HHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 45678888887766644 999988 99999999999998877766666543 35567778888888877665421 344
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEE
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgil 276 (950)
+..|.|.+.|...+++...++.+.+|..-.....|.+...+ +..|+|||+|.++.+++||||||+.++.||+|||||+|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~-KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAP-KAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCc-ccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 56899998887777777777777777777667777665544 78999999999999999999999999999999999999
Q ss_pred EeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHH
Q 002230 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (950)
Q Consensus 277 l~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (950)
++|+-++||+|.|||||.|+.|.+++. +||||.+.+|++.|+|++||.+|..|+-..++.. ......+|+.++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999999887 9999999999999999999999999999999887 45558899999988876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHhccc
Q 002230 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (950)
Q Consensus 357 i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvva-vP~~L~lav~l~l~~~~~~~~~~~ 435 (950)
....+.+ -.++.+...|..+. ........-+.++++. +|.|||..++.+++.+..+|+++|
T Consensus 251 ci~si~~---g~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIAL---GMLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHHH---HHHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 5433221 11222222221110 1112223334455555 999999999999999999999999
Q ss_pred cccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceee
Q 002230 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVI 515 (950)
Q Consensus 436 ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 515 (950)
+++++++|+|.|+.++++|+|||||||.|+++|.+-.+. +- ....+.+.. ++.+ |.. +..+
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~e---v~----------v~gv~~D~~--~L~A-~rA--sr~e- 373 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE---VF----------VKGVDKDDV--LLTA-ARA--SRKE- 373 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcce---ee----------ecCCChHHH--HHHH-HHH--hhhc-
Confidence 999999999999999999999999999999999761110 00 001111211 1111 111 1111
Q ss_pred cCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccc
Q 002230 516 GEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (950)
Q Consensus 516 ~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (950)
..+..|.|++..... .++.+..++.++..|||+..||....+..++|..+-.+|||||.|++.|..
T Consensus 374 --------n~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~-- 439 (942)
T KOG0205|consen 374 --------NQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE-- 439 (942)
T ss_pred --------ChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc--
Confidence 347889999876543 477888999999999999999999999999999999999999999999974
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHC
Q 002230 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (950)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~a 675 (950)
+.+.++.+.+.+++||++|+|.+++|++..++... +.......++|+.-+-||+|.+..++|++....
T Consensus 440 ---------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirral~l 507 (942)
T KOG0205|consen 440 ---------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNL 507 (942)
T ss_pred ---------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHHHhc
Confidence 33456788999999999999999999998776422 223455789999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcc-cccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCE
Q 002230 676 GITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPE-FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752 (950)
Q Consensus 676 Gi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~-~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~ 752 (950)
|+.|.|+|||...-++..++++|.-++ ++.-+-|.. -..+.....++.+.+..=||.+.|++|..+|+.||++ |+.
T Consensus 508 Gv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi 586 (942)
T KOG0205|consen 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHI 586 (942)
T ss_pred cceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-Cce
Confidence 999999999999999999999997642 101111111 1122223455666666789999999999999999999 999
Q ss_pred EEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (950)
Q Consensus 753 v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~ 826 (950)
++|+|||+||+|+||.||+|||+. .++++|+.+||+|++...++-|..++..+|.+|+|++.+..|.+...+-
T Consensus 587 ~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 587 VGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred ecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999998887665544
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-80 Score=749.45 Aligned_cols=641 Identities=20% Similarity=0.281 Sum_probs=480.8
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHHhcCH
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v 121 (950)
+..|....|+.....+++..+++++.+.+..+.|+.. . . ..+...++..||.+.+.+-....+.++........-.
T Consensus 64 C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~--~-~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~ 139 (741)
T PRK11033 64 CPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND--I-R-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLIT 139 (741)
T ss_pred cHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc--c-h-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHH
Confidence 4578888888888888889999999888877776433 1 1 3444556778998765421110011010000011100
Q ss_pred HHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHH---HHHHH-HHHHHHHHhhccccCCC
Q 002230 122 EGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT---LMILA-VCALVSLVVGIATEGWP 197 (950)
Q Consensus 122 ~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~---~~il~-i~a~~s~~~~~~~~~~~ 197 (950)
-.....+..-. .++... . .+...... ......+|++..|+.++... +-.|+ ++++.+++++
T Consensus 140 ~~~~~~~~~~~-~~~~~~---~-~~~~~~~~---~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~------- 204 (741)
T PRK11033 140 LAVMMAISWGL-EQFNHP---F-GQLAFIAT---TLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG------- 204 (741)
T ss_pred HHHHHHHHHHH-hhhhhH---H-HHHHHHHH---HHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc-------
Confidence 01111211100 011110 0 11100000 01235688899999987532 22233 3444444443
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEE
Q 002230 198 KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277 (950)
Q Consensus 198 ~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill 277 (950)
.|.++..+++.+++.-.+....+++.++..++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||+++
T Consensus 205 -~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi 282 (741)
T PRK11033 205 -ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL 282 (741)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE
Confidence 25555444333333333333333333333334443 4567899999999999999999999999999999999999999
Q ss_pred eecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHH
Q 002230 278 SGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATII 357 (950)
Q Consensus 278 ~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i 357 (950)
+|+ ..||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|.+++.+++.+++|+|+.+++++.++
T Consensus 283 ~g~-~~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 360 (741)
T PRK11033 283 SPF-ASFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIY 360 (741)
T ss_pred ECc-EEeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 997 5999999999999999998775 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccc
Q 002230 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKAL 437 (950)
Q Consensus 358 ~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~il 437 (950)
+++++.+++++|++|...+ +. .+...+..++++++++|||+|.+++|+++..+..+++|+|++
T Consensus 361 ~~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gil 423 (741)
T PRK11033 361 TPAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGAL 423 (741)
T ss_pred HHHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeE
Confidence 9999999999988763211 00 234567788999999999999999999999999999999999
Q ss_pred cccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecC
Q 002230 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (950)
Q Consensus 438 vr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (950)
+|+.+++|+|+++++||||||||||+|+|+|.+++..+... .++.+.+ +.. .+
T Consensus 424 ik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~---aa~------~e--- 476 (741)
T PRK11033 424 IKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLAL---AAA------VE--- 476 (741)
T ss_pred EcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHH---HHH------Hh---
Confidence 99999999999999999999999999999999986533210 1122222 111 11
Q ss_pred CCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEE---EEEEcCCCcEEEEEcCchHHHHHhcccc
Q 002230 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMG---VVIELPEGGFRVHCKGASEIILAACDKF 594 (950)
Q Consensus 518 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~ms---vvv~~~~~~~~~~~KGa~e~il~~c~~~ 594 (950)
..+.||.++|+++++.+.+.+ +||.++++.+. +.....+..+ .-|+++.+.+
T Consensus 477 ----~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~----- 531 (741)
T PRK11033 477 ----QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP----- 531 (741)
T ss_pred ----cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh-----
Confidence 126799999999998776543 46777776652 2222223222 2377765432
Q ss_pred ccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHH
Q 002230 595 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRS 674 (950)
Q Consensus 595 ~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~ 674 (950)
++ ..+.+.++.+..+|+|++++|+ |.+++|+++++|++|||++++|++|++
T Consensus 532 ---------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 532 ---------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred ---------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHH
Confidence 11 2244556788999999999994 568999999999999999999999999
Q ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEE
Q 002230 675 AGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVA 754 (950)
Q Consensus 675 aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~ 754 (950)
.|++++|+|||+..+|.++|+++||. .+++..|+||..+|+.+|+. +.|+
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~ 632 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLA 632 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEE
Confidence 99999999999999999999999995 56788999999999999954 5799
Q ss_pred EEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (950)
Q Consensus 755 ~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~ 834 (950)
|+|||.||+|||++|||||||| +|++.++++||++++++++..+.+++++||+++.||++|+.|++.||++.+++++++
T Consensus 633 mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 633 MVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred EEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 899999999999999999999999999999999999999999999999998888753
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-80 Score=709.73 Aligned_cols=668 Identities=22% Similarity=0.299 Sum_probs=511.1
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh-hhhc-----cCChH--
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG-SIVE-----GHDIK-- 113 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~~~-- 113 (950)
+..+....|+.+.+.++++.++|...+.++.+.|+.. ...+.++.+.+++.||........ ...+ ..+.+
T Consensus 157 c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w 234 (951)
T KOG0207|consen 157 CASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKW 234 (951)
T ss_pred ccchhhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhc
Confidence 3455667788889999999999999999999988776 677788888888888875433311 1111 00111
Q ss_pred ---HHHHhc-CHHH-HHH----------HhCCCccCCCChhHHHHHHHHhhcCCCccCC----CCCccHHHHHHHHHhhH
Q 002230 114 ---KLKVHG-GVEG-IAE----------KLSTSITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDM 174 (950)
Q Consensus 114 ---~l~~~~-~v~~-l~~----------~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~~~~~ 174 (950)
.+...+ ++.= ++. ++......|+.-.. .. .+.+.. .-+++|+.-.|+++++.
T Consensus 235 ~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-------~~~L~~~vqf~~G~~fy~~A~ksL~~g 305 (951)
T KOG0207|consen 235 KRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGN--SL-------SFVLATPVQFVGGRPFYLAAYKSLKRG 305 (951)
T ss_pred chHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhh--HH-------HhhhheeeEEecceeeHHHHHHHHhcC
Confidence 111111 0110 111 11113333444322 11 122222 25789999999999987
Q ss_pred HHHHH--H-HHHHHHHHhhccc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh------hhcCCe
Q 002230 175 TLMIL--A-VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKIT 239 (950)
Q Consensus 175 ~~~il--~-i~a~~s~~~~~~~------~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~ 239 (950)
...|- + +.+..++++.+.. ...+..+||...|++.++. +++|.++++..+..+ .+.+.+
T Consensus 306 ~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~------lgr~LE~~Ak~kts~alskLmsl~p~~ 379 (951)
T KOG0207|consen 306 SANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFIT------LGRWLESLAKGKTSEALSKLMSLAPSK 379 (951)
T ss_pred CCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHH------HHHHHHHHhhccchHHHHHHhhcCccc
Confidence 65442 1 1222222222211 1224567887666655544 389999988776543 345678
Q ss_pred EEEEeCCe-EEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEE
Q 002230 240 VQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKM 318 (950)
Q Consensus 240 v~V~R~g~-~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~ 318 (950)
+.++.+|+ .++|+.+.|.+||+|.+.||++||+||++++|++ +||||++|||+.||.|..+++ +.+||.+.+|...+
T Consensus 380 a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~V 457 (951)
T KOG0207|consen 380 ATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLV 457 (951)
T ss_pred ceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEE
Confidence 89999886 8999999999999999999999999999999986 999999999999999998886 99999999999999
Q ss_pred EEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHH
Q 002230 319 LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (950)
Q Consensus 319 ~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (950)
.+|++|.+|.+++|.+++++++..++|+|+.+|+++.+|+++++++++.+|++|++...+...+. ..| ...+.
T Consensus 458 kaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~---~~~----~~~~~ 530 (951)
T KOG0207|consen 458 KATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP---RSF----FDAFS 530 (951)
T ss_pred EEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc---chh----hHHHH
Confidence 99999999999999999999999999999999999999999999999999999976443221110 111 13567
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceee
Q 002230 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (950)
Q Consensus 399 ~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (950)
..|..++++++++|||+|.||+|++...+....+++|+|+|..+++|.+.++++|+||||||||+|+++|+++....+..
T Consensus 531 ~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~ 610 (951)
T KOG0207|consen 531 HAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI 610 (951)
T ss_pred HHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999987655421
Q ss_pred eccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecC
Q 002230 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (950)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF 558 (950)
. ..+.+.+. +..+. .+.||..+|+++++++..... ....+.....|
T Consensus 611 ~--------------~~e~l~~v---------~a~Es-------~SeHPig~AIv~yak~~~~~~----~~~~~~~~~~~ 656 (951)
T KOG0207|consen 611 S--------------LKEALALV---------AAMES-------GSEHPIGKAIVDYAKEKLVEP----NPEGVLSFEYF 656 (951)
T ss_pred c--------------HHHHHHHH---------HHHhc-------CCcCchHHHHHHHHHhccccc----Cccccceeecc
Confidence 0 01122111 11111 277999999999998776110 11112223333
Q ss_pred CCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC
Q 002230 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~ 638 (950)
..+-+. +-+...+.. .+-|.-+.+.. +|...+ +.+++..++....|..+.+++
T Consensus 657 pg~g~~--~~~~~~~~~---i~iGN~~~~~r--------~~~~~~------~~i~~~~~~~e~~g~tvv~v~-------- 709 (951)
T KOG0207|consen 657 PGEGIY--VTVTVDGNE---VLIGNKEWMSR--------NGCSIP------DDILDALTESERKGQTVVYVA-------- 709 (951)
T ss_pred cCCCcc--cceEEeeeE---EeechHHHHHh--------cCCCCc------hhHHHhhhhHhhcCceEEEEE--------
Confidence 333322 222222223 23366555432 332222 236677777788898888888
Q ss_pred CCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHH
Q 002230 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (950)
Q Consensus 639 ~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~ 718 (950)
-|.++.|+++++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++||..
T Consensus 710 --------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------- 764 (951)
T KOG0207|consen 710 --------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------- 764 (951)
T ss_pred --------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------
Confidence 4778999999999999999999999999999999999999999999999999764
Q ss_pred HHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH
Q 002230 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (950)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~ 798 (950)
|+|...|+||.+.|+.+|++ |..|+|+|||+||+|||.+|||||+|| .|+++|.++||+|++.+|+..
T Consensus 765 ----------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~ 832 (951)
T KOG0207|consen 765 ----------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRD 832 (951)
T ss_pred ----------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhh
Confidence 99999999999999999999 999999999999999999999999999 889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (950)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~ 833 (950)
++.++..+|++..||+.|+.|+++||++.++++..
T Consensus 833 v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 833 VPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 99999999999999999999999999999998874
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-77 Score=701.21 Aligned_cols=492 Identities=39% Similarity=0.600 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHh-hhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcc
Q 002230 209 SILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (950)
Q Consensus 209 ~illv~~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS 287 (950)
.+++..++....+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 3455666667777777777777765 3567899999999 999999999999999999999999999999995 799999
Q ss_pred cccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHH-HHHHHHHHHHHH
Q 002230 288 SLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAV 366 (950)
Q Consensus 288 ~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~i~~~~l~~a~ 366 (950)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|++++.++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988775 99999999999999999999999999999999888877899999999999 788888888888
Q ss_pred HHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhc
Q 002230 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (950)
Q Consensus 367 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~ 446 (950)
+++++|...+.. .. .+...+..++++++++|||+||+++++++..+..+|.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~------------~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLWD------------PN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHcc------------cc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 777776432110 00 245678899999999999999999999999999999999999999999999
Q ss_pred cCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCC
Q 002230 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (950)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (950)
||+++++|||||||||+|+|+|.+++..+. .+.++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999998875321 012679
Q ss_pred hhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCH
Q 002230 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (950)
Q Consensus 527 p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (950)
|.|.|+++++.... ++..||++.+|+|+++++.+++ .++||+++.+++.|..
T Consensus 263 p~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 99999999886421 2568999999999999885333 4789999999998852
Q ss_pred HHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCC
Q 002230 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (950)
Q Consensus 607 ~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~ 686 (950)
+.+..+.++.+|+|++++|++ .+++|+++++|++|++++++|+.|+++|++++|+|||+
T Consensus 315 -----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 -----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred -----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 123345678899999999964 26999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhh
Q 002230 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (950)
Q Consensus 687 ~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al 766 (950)
..+|..+|+++|| +++++|+||.++|+.+|+. |+.|+|+|||.||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999986 4789999999999999988 99999999999999999
Q ss_pred hcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHH
Q 002230 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAV 846 (950)
Q Consensus 767 ~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~ 846 (950)
++|||||+|| |+++||++++++++..+..++++||+++.++++++.|.++||++.+++++++.+
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---------- 486 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---------- 486 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 9999999997 689999999999999999999999999999999999999999998888876431
Q ss_pred HHHHHHHHHHHHHHHH
Q 002230 847 QLLWVNMIMDTLGALA 862 (950)
Q Consensus 847 qll~~nli~d~l~~la 862 (950)
+|+++++.++++
T Consensus 487 ----~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ----LNLVPPGLAALA 498 (499)
T ss_pred ----HHHHhcchhhhc
Confidence 788888877654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-75 Score=688.91 Aligned_cols=530 Identities=27% Similarity=0.391 Sum_probs=421.7
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHH-HHHHhhc---cc-----cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002230 160 ARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI---AT-----EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ- 227 (950)
Q Consensus 160 ~~~f~~~~~~~~~~~~~~i--l~i~a~-~s~~~~~---~~-----~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~- 227 (950)
+.+|++..|+.++.....+ |+..++ .+++++. .. .+..++||++.++++.++++ ++|.+++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~ 75 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILL------GRWLEMLAK 75 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHH------HHHHHHHHH
Confidence 4688899999887544322 222222 2222221 11 11235788887766554443 44444433
Q ss_pred ------HHHhHhhhcCCeEEEEeC-CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccC
Q 002230 228 ------FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300 (950)
Q Consensus 228 ------~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~ 300 (950)
.++|.+ ..+.+++|+|+ |.+++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|..
T Consensus 76 ~~a~~~~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~ 153 (562)
T TIGR01511 76 GRASDALSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKV 153 (562)
T ss_pred HHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCC
Confidence 233332 34568888885 677999999999999999999999999999999985 999999999999999998
Q ss_pred CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 002230 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRK 380 (950)
Q Consensus 301 ~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~ 380 (950)
++. +|+||.+.+|+++++|+++|.+|.+|++.+++.+++.+++|+|+.++++++++.+++++++++++++|.
T Consensus 154 gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------- 225 (562)
T TIGR01511 154 GDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------- 225 (562)
T ss_pred CCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 775 999999999999999999999999999999999999999999999999999999999988888877652
Q ss_pred ccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccc
Q 002230 381 LQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460 (950)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGT 460 (950)
..+..++++++++|||+|++++|+++..++.+++++|+++|+.+++|+|+++|+||||||||
T Consensus 226 ------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGT 287 (562)
T TIGR01511 226 ------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 287 (562)
T ss_pred ------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCC
Confidence 24667899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcC
Q 002230 461 LTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540 (950)
Q Consensus 461 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g 540 (950)
||+|+|+|.++...+... .++.+.+ +... + ..+.||.++|+++++.+.+
T Consensus 288 LT~g~~~v~~i~~~~~~~---------------~~~~l~~---aa~~------e-------~~s~HPia~Ai~~~~~~~~ 336 (562)
T TIGR01511 288 LTQGKPTVTDVHVFGDRD---------------RTELLAL---AAAL------E-------AGSEHPLAKAIVSYAKEKG 336 (562)
T ss_pred CcCCCEEEEEEecCCCCC---------------HHHHHHH---HHHH------h-------ccCCChHHHHHHHHHHhcC
Confidence 999999999886543210 1122222 1111 1 1257999999999998766
Q ss_pred CChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHH
Q 002230 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFA 620 (950)
Q Consensus 541 ~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a 620 (950)
.+... .+-.+.+| . .++.....+.. +..|+++.+.+ ++. .++ ++.
T Consensus 337 ~~~~~----~~~~~~~~----g--~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~ 381 (562)
T TIGR01511 337 ITLVE----VSDFKAIP----G--IGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKA 381 (562)
T ss_pred CCcCC----CCCeEEEC----C--ceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhh
Confidence 43211 01111111 1 12222222222 33477665432 111 111 134
Q ss_pred hcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 621 SEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 621 ~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
++|.+++.++ .|.+++|++.++|++||+++++|++|++.|++++|+|||+..++.++++++||.
T Consensus 382 ~~g~~~~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 382 EQGSTSVLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred hCCCEEEEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 6788888776 567899999999999999999999999999999999999999999999999993
Q ss_pred cCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCc
Q 002230 701 TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (950)
Q Consensus 701 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~ 780 (950)
++++..|++|.++++.++++ ++.|+|+|||.||+||+++||+||+|| .|+
T Consensus 446 ----------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~ 495 (562)
T TIGR01511 446 ----------------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGT 495 (562)
T ss_pred ----------------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcC
Confidence 77888999999999999988 999999999999999999999999999 899
Q ss_pred HHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (950)
Q Consensus 781 ~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~ 835 (950)
+.++++||++++++++..+.+++++||+++++|++|+.|++.||++.+++++.+.
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999988887443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-75 Score=691.90 Aligned_cols=512 Identities=28% Similarity=0.382 Sum_probs=424.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCC-eEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g-~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
|.++..+++.+++.-++....+++.++..+++.+ .++..++|+|+| ++++|+++||+|||+|.+++||+|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 5666666655555555555555555555555554 455689999995 99999999999999999999999999999999
Q ss_pred ecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHH
Q 002230 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (950)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~ 358 (950)
|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+.+.+...+++|+|+.+++++.++.
T Consensus 97 g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 97 GE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred cc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 97 599999999999999998876 5999999999999999999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhcccccc
Q 002230 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (950)
Q Consensus 359 ~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilv 438 (950)
++++++++++|++|+.... . ..+..++++++++|||+||+++|++++.++++|.++|+++
T Consensus 175 ~~~l~~a~~~~~~~~~~~~------------------~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGA------------------L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred HHHHHHHHHHHHHHHHhcc------------------c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 9999999988887643210 0 4577889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCC
Q 002230 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (950)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (950)
|+++++|+||++|++|||||||||+|+|+|.++...++.. ...++.+.+ +.. .+
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l~~---a~~------~e---- 288 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELLAL---AAA------LE---- 288 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHHHH---HHH------Hh----
Confidence 9999999999999999999999999999999987543221 001122221 111 11
Q ss_pred CceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCC
Q 002230 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (950)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (950)
..+.||+++|+++++.+.+.+... +| + +...++.++..++||+++..+..|+.. ..+
T Consensus 289 ---~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~------~~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~ 345 (556)
T TIGR01525 289 ---QSSSHPLARAIVRYAKKRGLELPK-----------QE--D------VEEVPGKGVEATVDGQEEVRIGNPRLL-ELA 345 (556)
T ss_pred ---ccCCChHHHHHHHHHHhcCCCccc-----------cc--C------eeEecCCeEEEEECCeeEEEEecHHHH-hhc
Confidence 126799999999999877654221 11 0 011234456666666656666666432 111
Q ss_pred CeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCC-C
Q 002230 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG-I 677 (950)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aG-i 677 (950)
+.. ...+++.++.++.+|+|++.++ .|.+++|.+.++|++|||++++++.|+++| +
T Consensus 346 ~~~-------~~~~~~~~~~~~~~g~~~~~v~----------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i 402 (556)
T TIGR01525 346 AEP-------ISASPDLLNEGESQGKTVVFVA----------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGI 402 (556)
T ss_pred CCC-------chhhHHHHHHHhhCCcEEEEEE----------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCC
Confidence 111 1122345667889999999988 356899999999999999999999999999 9
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEc
Q 002230 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (950)
Q Consensus 678 ~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vG 757 (950)
+++|+|||+..++.++++++|+.. +|+++.|++|..+++.+++. ++.|+|+|
T Consensus 403 ~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vG 454 (556)
T TIGR01525 403 KLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVG 454 (556)
T ss_pred eEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 999999999999999999999964 89999999999999999988 89999999
Q ss_pred CCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (950)
Q Consensus 758 DG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~ 835 (950)
||.||++|+++||+|++|| ++++.+++.||+++.++++..+.+++++||+++.||++++.|+++||++++++++.+.
T Consensus 455 Dg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 8999999999999999999999999999999999999999999999999998887543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-74 Score=714.46 Aligned_cols=654 Identities=22% Similarity=0.278 Sum_probs=479.8
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh--hh--hcc---CChHH
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG--SI--VEG---HDIKK 114 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~---~~~~~ 114 (950)
+..|....|+...+.+++..+++++.+.+..+.. ......+.+.++..||.+.+.+.. .. .++ ++.+.
T Consensus 110 Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~-----~~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~ 184 (834)
T PRK10671 110 CASCVSRVQNALQSVPGVTQARVNLAERTALVMG-----SASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAQATMKR 184 (834)
T ss_pred cHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc-----cCCHHHHHHHHHhcCCCccccccccchhhhhhhhhHHHHHH
Confidence 4567777888888888888888888777655542 122234445567788876542211 00 000 11112
Q ss_pred HHHhcCHHHHHH----HhCCCc-cCCCChhHHHHHHHHhhc-CCCccCCCCCccHHHHHHHHHhhHHHH--HHHHHHH-H
Q 002230 115 LKVHGGVEGIAE----KLSTSI-TDGISTSEHLLNRRKEIY-GINKFTESPARGFWVYVWEALHDMTLM--ILAVCAL-V 185 (950)
Q Consensus 115 l~~~~~v~~l~~----~l~~~~-~~Gl~~~~~~~~~r~~~~-G~N~~~~~~~~~f~~~~~~~~~~~~~~--il~i~a~-~ 185 (950)
+.....+..+.. .+..-. ..-+.... ...+...+ -.-......+.+|++..|+++++.... .|+.+++ .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~ 262 (834)
T PRK10671 185 FRWQAIVALAVGIPVMVWGMIGDNMMVTADN--RSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGA 262 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCccc--hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 222222333221 111000 00011100 00010000 000000123668888889888754322 2222222 2
Q ss_pred HHHhhc----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh------hhcCCeEEEEeCCeEEEE
Q 002230 186 SLVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARNGFRRKI 251 (950)
Q Consensus 186 s~~~~~----~----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R~g~~~~I 251 (950)
++++++ . ..+..+.|||..++++.++++ ++|.|++..++..+ ...+..++|+|+|++++|
T Consensus 263 a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v 336 (834)
T PRK10671 263 AWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINL------GHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSV 336 (834)
T ss_pred HHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEE
Confidence 222221 1 111123488876655544333 56666655443322 245678999999999999
Q ss_pred ecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhh
Q 002230 252 SIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (950)
Q Consensus 252 ~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~ 331 (950)
+.++|+|||+|.|++||+|||||++++|+ ..||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+
T Consensus 337 ~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~ 414 (834)
T PRK10671 337 PLADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSR 414 (834)
T ss_pred EHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHH
Confidence 99999999999999999999999999997 5999999999999999998774 999999999999999999999999999
Q ss_pred HhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 002230 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (950)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvva 411 (950)
|.+++++++..++|+|+..++++.++.+++++++++++++|+.. +. ...+...+..++++++++
T Consensus 415 i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~--------~~~~~~~~~~a~~vlv~a 478 (834)
T PRK10671 415 IIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP--------APQIVYTLVIATTVLIIA 478 (834)
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC--------chHHHHHHHHHHHHHHHh
Confidence 99999998888999999999999999999999999888876431 00 012445677899999999
Q ss_pred hcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCC
Q 002230 412 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGS 491 (950)
Q Consensus 412 vP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 491 (950)
|||+|++++|+++..++.+++++|+++|+++++|+|+++|++|||||||||+|+|+|.+++..+..
T Consensus 479 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-------------- 544 (834)
T PRK10671 479 CPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-------------- 544 (834)
T ss_pred cccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999887643321
Q ss_pred CCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEc
Q 002230 492 SIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571 (950)
Q Consensus 492 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~ 571 (950)
++ .+++..+...++. +.||.++|+++++...... ...+|+.... .++....
T Consensus 545 --~~--~~~l~~a~~~e~~-------------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g-~Gv~~~~ 595 (834)
T PRK10671 545 --DE--AQALRLAAALEQG-------------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRG-LGVSGEA 595 (834)
T ss_pred --CH--HHHHHHHHHHhCC-------------CCCHHHHHHHHHHhhCCCC-----------CcccceEecc-eEEEEEE
Confidence 11 1222222222221 6799999999987533211 1122332221 1222222
Q ss_pred CCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEE
Q 002230 572 PEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTC 651 (950)
Q Consensus 572 ~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~ 651 (950)
+ +. .+++|+++.+.... +. ++.+.+.++.++.+|.+++.+++ |..+
T Consensus 596 ~-g~--~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~----------------~~~~ 641 (834)
T PRK10671 596 E-GH--ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAV----------------DGKA 641 (834)
T ss_pred C-CE--EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEE----------------CCEE
Confidence 2 22 24569988764321 11 12355667788899999999884 4578
Q ss_pred EeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEe
Q 002230 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731 (950)
Q Consensus 652 lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (950)
+|++++.|++||+++++|++|++.|++++|+|||+..++.++++++||.. +++
T Consensus 642 ~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~ 694 (834)
T PRK10671 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIA 694 (834)
T ss_pred EEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEe
Confidence 99999999999999999999999999999999999999999999999964 899
Q ss_pred ecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHH
Q 002230 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811 (950)
Q Consensus 732 r~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ 811 (950)
+..|++|.++++.++.+ ++.|+|+|||.||+||+++||+||+|| +|++.++++||++++++++..|.+++++||+++.
T Consensus 695 ~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~ 772 (834)
T PRK10671 695 GVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLR 772 (834)
T ss_pred CCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999988 999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002230 812 NIQKFVQFQLTVNVVALIVNF 832 (950)
Q Consensus 812 ~i~k~i~~~l~~N~~~~~~~~ 832 (950)
+|++|+.|++.||++++++++
T Consensus 773 ~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 773 NMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=675.43 Aligned_cols=502 Identities=27% Similarity=0.359 Sum_probs=414.6
Q ss_pred HHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCC
Q 002230 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (950)
Q Consensus 179 l~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvv 258 (950)
+.++++++++.+ .|+|+..+++.+++..++....+++.++..+++.+ ..+.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445555666554 48898776666656555555555555555555554 456789999999999999999999
Q ss_pred CcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcC
Q 002230 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (950)
Q Consensus 259 GDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~ 338 (950)
||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|.+|++.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 9999999999999999999997 599999999999999998876 59999999999999999999999999999999998
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHH
Q 002230 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (950)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~l 418 (950)
...+++|+|+.+++++.++.+++++++++++++|... . . + . ..+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~----~------~--~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL---K----R----W------P--FWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c----c----c------H--HHHHHHHHHHhhcCcccccc
Confidence 8888899999999999999999988888777765321 0 0 0 1 15777899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHH
Q 002230 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (950)
Q Consensus 419 av~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (950)
++|+++..++++|.++|+++|+++++|++|+++++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999876421 122
Q ss_pred HHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce--EEEEEEcCCCcE
Q 002230 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (950)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~--msvvv~~~~~~~ 576 (950)
.. +... + ..+.||.++|+++++.+.+ ||++.+.. .++.....+..+
T Consensus 274 ~~---a~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RL---AAAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HH---HHHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 21 1111 1 1267999999999987653 22222211 122222222222
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeee
Q 002230 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (950)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~ 656 (950)
..|+++.+.+. + ...+..+|.+++.++ .|..++|.+.
T Consensus 322 ---~ig~~~~~~~~--------~----------------~~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 ---RIGNPRSLEAA--------V----------------GARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred ---EEcCHHHHhhc--------C----------------CcchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 23666543221 1 013455677776665 4678999999
Q ss_pred ccCCCCccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++|++||+++++|++|+++|+ ++.|+|||+..++.++++++||.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 7889999
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k 815 (950)
++|..+++.+++. ++.|+|+|||.||++|+++||+|++||.+|++.++++||++++++++..+.+++++||+++++|++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002230 816 FVQFQLTVNVVALIVNFSS 834 (950)
Q Consensus 816 ~i~~~l~~N~~~~~~~~~~ 834 (950)
|+.|++.||++++++++++
T Consensus 491 nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 491 NVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988764
|
. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-71 Score=620.69 Aligned_cols=740 Identities=23% Similarity=0.299 Sum_probs=525.3
Q ss_pred CCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHH
Q 002230 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (950)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv 213 (950)
.|.. ++.++..-...||.|.+..+ .++|-.++.+.-..|+..+...|..+ |-.. +.||.+... +++.
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgL----WCLD----eyWYySlFt---LfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGL----WCLD----EYWYYSLFT---LFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHH----HHhH----HHHHHHHHH---HHHH
Confidence 5777 44457777777999999654 56788888888777776655555444 3322 357776433 3333
Q ss_pred HHHHHHHHHHHHHHHHHhHhh-hcCCeEEEEeCCeEEEEecCCcCCCcEEEeCC---CCeecccEEEEeecceEEEcccc
Q 002230 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADGLFVSGFSVLINESSL 289 (950)
Q Consensus 214 ~~v~~~~~~~~~~~~~~l~~~-~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~---Gd~vPaDgill~g~~l~VDeS~L 289 (950)
+.+.+.--+++.+......+. ..+..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+.|+ |.|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 444444444444444444442 34568999999999999999999999999988 45899999999996 79999999
Q ss_pred cCCCCcccccC----------------CCCeEEeccEEe-------------eceEEEEEEEEeeccchhhHhhhhcCCC
Q 002230 290 TGESEPVNVNA----------------LNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (950)
Q Consensus 290 TGEs~pv~k~~----------------~~~~l~sGt~v~-------------~G~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (950)
||||.|..|.+ +..++|.||+++ +|.+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 99999999841 345799999996 5789999999999999999999887755
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHH
Q 002230 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (950)
Q Consensus 341 ~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav 420 (950)
++-|.-. +-+.++ ++.+++|.+....|.+....... ..+=...|.-++.|+...+|.-||+-+
T Consensus 387 ervTaNn----~Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 387 ERVTANN----RETFIF-----ILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeecc----HHHHHH-----HHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhh
Confidence 5433221 112222 33334444444444332211110 011224455566777888999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHH
Q 002230 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (950)
Q Consensus 421 ~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (950)
+++.-.+...+.|.+++|..+=.+.-.|++|.-|||||||||+..|.|..+.-.... .......+..+.+...
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~- 522 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVL- 522 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHH-
Confidence 999999999999999999999999999999999999999999999999886532211 0001112222333333
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHH-cC-CCh----HHHhhhcceEEEecCCCCCceEEEEEEcCC-
Q 002230 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LG-GDF----QAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (950)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g-~~~----~~~~~~~~i~~~~pF~s~~k~msvvv~~~~- 573 (950)
.++.||+-....+ ...|+|.|+|.+++... .. .+. +..-+..+|.+.+.|+|.-|||+|+....+
T Consensus 523 ---vlAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~ 594 (1160)
T KOG0209|consen 523 ---VLASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGP 594 (1160)
T ss_pred ---HHHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccC
Confidence 3344443322221 26899999999987621 10 010 011125778999999999999999987543
Q ss_pred ---CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC-----CCCCCCC
Q 002230 574 ---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (950)
Q Consensus 574 ---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~-----~~~~~~~ 645 (950)
.++.+.+|||||.|..+-.. ..+.+++...+|+.+|.||||++||.+..-. +-+++.+
T Consensus 595 g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~v 660 (1160)
T KOG0209|consen 595 GSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDV 660 (1160)
T ss_pred CCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhh
Confidence 35788899999999876542 2345778889999999999999999997431 2345778
Q ss_pred CCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 002230 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (950)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (950)
|++|+|.|.+.|.-|+|+|++++|+.|++.+++++|+||||+.||.++|+++||.....
T Consensus 661 EsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~ 740 (1160)
T KOG0209|consen 661 ESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG 740 (1160)
T ss_pred hhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC
Confidence 99999999999999999999999999999999999999999999999999999975311
Q ss_pred --------------------eeeeCcccccCCH-HHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCH
Q 002230 705 --------------------IAIEGPEFREKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (950)
Q Consensus 705 --------------------~vi~g~~~~~~~~-~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~ 763 (950)
++++|..+..+.. +.+.++++++.||||+.|.||..++..+++. |+.++|+|||+||+
T Consensus 741 t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 741 TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDV 819 (1160)
T ss_pred ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcch
Confidence 4555666655432 3577888999999999999999999999998 99999999999999
Q ss_pred HhhhcCCcceeecCCCcHHHH-----------------------------------------------------------
Q 002230 764 PALHEADIGLAMGIAGTEVAK----------------------------------------------------------- 784 (950)
Q Consensus 764 ~al~~AdvGiamg~~g~~~ak----------------------------------------------------------- 784 (950)
.|||+||||||+= ++++.++
T Consensus 820 GALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~ 898 (1160)
T KOG0209|consen 820 GALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEED 898 (1160)
T ss_pred hhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc
Confidence 9999999999985 3332000
Q ss_pred ------------hcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHH
Q 002230 785 ------------ESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVN 852 (950)
Q Consensus 785 ------------~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~n 852 (950)
-||.+.-...+.+++.+.|+.||++.-+.-|.... |.-|....... .+.++.-..-+...|...-.
T Consensus 899 ~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisAYs-lSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 899 KGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISAYS-LSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred ccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHHH-HHHhhhcCceecchhHhHHH
Confidence 01122222225778899999999999876665543 33444322211 23444556778888877666
Q ss_pred HHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc----c--ccCCCCccccc
Q 002230 853 MIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV----F--RLDGPDPDLIL 926 (950)
Q Consensus 853 li~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~~----~--~~~~~~~~~~~ 926 (950)
+++. ...+.+.-.+|-+.|.+..|. .+++|...+..+++|...++..++++.-..... - +++..-.+...
T Consensus 977 lLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~Psll 1052 (1160)
T KOG0209|consen 977 LLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLL 1052 (1160)
T ss_pred HHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhh
Confidence 6553 345666678899999888884 578888888888888888877776654322110 0 11111123445
Q ss_pred chHHhHHHHHHHHHH
Q 002230 927 NTLIFNTFVFCQVCL 941 (950)
Q Consensus 927 ~t~~F~~~v~~q~~n 941 (950)
+|.+|..-...|+..
T Consensus 1053 Nt~vyiisl~~QvsT 1067 (1160)
T KOG0209|consen 1053 NTTVYIISLAQQVST 1067 (1160)
T ss_pred hhHHHHHHHHHHHHH
Confidence 777777666667643
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-59 Score=504.75 Aligned_cols=483 Identities=28% Similarity=0.411 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHhHhhhcCCeEEEEeC-CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcc
Q 002230 218 ATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (950)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv 296 (950)
++.+.+-.-|...|.+......++++++ |..+.|++.+|+.||+|.++.||.||+||.+++|.. +||||.+||||.||
T Consensus 84 a~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPV 162 (681)
T COG2216 84 AVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPV 162 (681)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcce
Confidence 3444444445555555445556677775 899999999999999999999999999999999985 99999999999999
Q ss_pred cccCCCCe--EEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 297 NVNALNPF--LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (950)
Q Consensus 297 ~k~~~~~~--l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~ 374 (950)
-|..++.+ +-.||.+.+.+.++++++.-.+|.+.|+..+++.++.++||-+--++-+ ..++.+.+++.++.+.
T Consensus 163 iresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL-----L~~LTliFL~~~~Tl~ 237 (681)
T COG2216 163 IRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL-----LSGLTLIFLLAVATLY 237 (681)
T ss_pred eeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH-----HHHHHHHHHHHHHhhh
Confidence 99877432 8899999999999999999999999999999999999999977555433 2222222221111111
Q ss_pred HHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEe
Q 002230 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (950)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (950)
.+ ..+..+. . -.+...++++|..+|-.+.-.++.-=..+|.|+.+.|++.++..++|..|.+|++.
T Consensus 238 p~--a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 238 PF--AIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred hH--HHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEE
Confidence 11 1111010 0 11344577788889987776666555678999999999999999999999999999
Q ss_pred eCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHH
Q 002230 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (950)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (950)
.|||||+|-|+-.-.+++..+.. + .+-+..+...++ +. -..|.-+.+++
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~gv----------------~---~~~la~aa~lsS---l~---------DeTpEGrSIV~ 352 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPGV----------------S---EEELADAAQLAS---LA---------DETPEGRSIVE 352 (681)
T ss_pred ecccCceeecchhhhheecCCCC----------------C---HHHHHHHHHHhh---hc---------cCCCCcccHHH
Confidence 99999999987766666554332 1 111222222222 11 34688899999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHH
Q 002230 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (950)
Q Consensus 535 ~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (950)
.+++.+.+.+...... .....||+.+.|.+++-. +++ +-.-|||.+.+....+ +.|...| +.++.
T Consensus 353 LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p------~~l~~ 417 (681)
T COG2216 353 LAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP------EDLDA 417 (681)
T ss_pred HHHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC------HHHHH
Confidence 9999886554332221 346789999888877644 333 4567999999987654 2232222 35777
Q ss_pred HHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 002230 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (950)
Q Consensus 615 ~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia 694 (950)
..++-++.|-..|+++ .|..++|++.++|-++||.+|-+.+||+.||+++|+||||+.||.+||
T Consensus 418 ~~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA 481 (681)
T COG2216 418 AVDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481 (681)
T ss_pred HHHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH
Confidence 8888899999999887 578899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 695 ~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
++.|++. ..|.++|+||.++++.-|.+ |+.|+|||||+||+|||.+||||+|
T Consensus 482 ~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~A 533 (681)
T COG2216 482 AEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVA 533 (681)
T ss_pred HHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhh
Confidence 9999976 88999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHH
Q 002230 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811 (950)
Q Consensus 775 mg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ 811 (950)
|. +||.+|||++.+|=+|.|...+.+.+..|+...-
T Consensus 534 MN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 534 MN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred hc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 99 9999999999999999999999999999998653
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=300.83 Aligned_cols=224 Identities=33% Similarity=0.534 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEc
Q 002230 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (950)
Q Consensus 207 ~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDe 286 (950)
++.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd~ 82 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVDE 82 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEEC
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccccc
Confidence 34445555566666776666666666544444499999999999999999999999999999999999999933589999
Q ss_pred ccccCCCCcccccC----CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHH
Q 002230 287 SSLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 362 (950)
Q Consensus 287 S~LTGEs~pv~k~~----~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l 362 (950)
|.+|||+.|+.|.+ .++++|+||.+.+|++.++|++||.+|..|++.+...++..+++++++.+++++.++.++.+
T Consensus 83 s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (230)
T PF00122_consen 83 SALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIIL 162 (230)
T ss_dssp HHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhccc
Confidence 99999999999981 45689999999999999999999999999999999988888889999999999999998888
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccch
Q 002230 363 FFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442 (950)
Q Consensus 363 ~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~ 442 (950)
+++++++++++.. .. ..++...+..++++++++|||+||+++++++.+++++|.++|+++|+++
T Consensus 163 ~~~~~~~~~~~~~------~~----------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~ 226 (230)
T PF00122_consen 163 AIAILVFIIWFFN------DS----------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLS 226 (230)
T ss_dssp HHHHHHHHHCHTG------ST----------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTT
T ss_pred ccchhhhccceec------cc----------ccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcc
Confidence 8777766554321 00 0134567788899999999999999999999999999999999999999
Q ss_pred hhhc
Q 002230 443 ACET 446 (950)
Q Consensus 443 ~~E~ 446 (950)
++|+
T Consensus 227 a~E~ 230 (230)
T PF00122_consen 227 ALEA 230 (230)
T ss_dssp HHHH
T ss_pred cccC
Confidence 9995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=217.90 Aligned_cols=97 Identities=44% Similarity=0.725 Sum_probs=91.2
Q ss_pred ceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccc
Q 002230 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (950)
Q Consensus 648 ~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (950)
+..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 7899999999999999999999999999999999999999999999999999532
Q ss_pred cEEeec--ChhhH--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 728 ~v~ar~--~P~~K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
.++++. +|++| ..+++.|+.. ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999966 668999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-14 Score=159.32 Aligned_cols=289 Identities=14% Similarity=0.186 Sum_probs=212.2
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC------------------------
Q 002230 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (950)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~------------------------ 637 (950)
|-...+.+.|+.++|. ....|++...++++.+....-.-.| .|+++|||+..-.
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 5567888999999874 3567999988998888877766666 5999999975310
Q ss_pred ---CC---------C-----CC-----------CCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 002230 638 ---FS---------A-----DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (950)
Q Consensus 638 ---~~---------~-----~~-----------~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t 689 (950)
+. + ++ ...-.+.+|.|++....+.|++....|+.|.++.|+.+..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 0 00 11124567999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeeeC------------------------------------cccccCCHH---------------
Q 002230 690 AKAIARECGILTDNGIAIEG------------------------------------PEFREKSDE--------------- 718 (950)
Q Consensus 690 a~~ia~~~gi~~~~~~vi~g------------------------------------~~~~~~~~~--------------- 718 (950)
.+-.|.++||...++..|+- .+...+..|
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998765422210 000000000
Q ss_pred -------------------------HHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccC--HHhhhcCCc
Q 002230 719 -------------------------ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND--APALHEADI 771 (950)
Q Consensus 719 -------------------------~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND--~~al~~Adv 771 (950)
+++.+..-+..|..++|+..-++++.+|++ |++++.+|...|- .-.+-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 011111122378899999999999999999 9999999999984 335578899
Q ss_pred ceeecCC------------CcHH-HH-----------------hcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 772 GLAMGIA------------GTEV-AK-----------------ESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (950)
Q Consensus 772 Giamg~~------------g~~~-ak-----------------~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (950)
+||+..- ++.. .. -++|+.+.....-++.++|+.+|.....+|+.+.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9987310 0100 11 2245555444566788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhc---cCCCCcccccc
Q 002230 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALA---TEPPNGDLMKR 875 (950)
Q Consensus 822 ~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~---~e~p~~~l~~~ 875 (950)
+..+...++.|++.++..+..++..|++|.+.+- .|.+.++ +.+|...+|.+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc--~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFC--IPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHH--HHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999988899999999999874 4555555 35555555543
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-16 Score=162.97 Aligned_cols=109 Identities=35% Similarity=0.500 Sum_probs=89.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 002230 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG 919 (950)
Q Consensus 840 ~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 919 (950)
+.|+++.|+||+|+++|.+|+++++.|||++++|+|||++++++++++.+|+.++.++++++++.++.++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999888877665555331
Q ss_pred C---CcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 920 P---DPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 920 ~---~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
. ......+|+.|+++|++|+||.++||+.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~ 112 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSR 112 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 1 0123479999999999999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.9e-14 Score=127.70 Aligned_cols=126 Identities=23% Similarity=0.351 Sum_probs=107.0
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
+...+.++---.+=++++++|++|++. +++++.|||...+....|+-.||....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 345566667777889999999999999 999999999999999999999997542
Q ss_pred EEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee-cC-CCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 729 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam-g~-~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
|++...|+.|..+++.|++. ++.|.|+|||.||.+||++||+||+. +. +..+-+.++||+++-+ ...++++.
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl~ 146 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDLL 146 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHHh
Confidence 99999999999999999987 89999999999999999999999875 31 2234477999999865 55555543
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.5e-15 Score=110.47 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.6
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhccccccccchhhhccchhhh
Q 002230 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (950)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~~~~~~e 50 (950)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||++||+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999998875
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-14 Score=127.31 Aligned_cols=86 Identities=37% Similarity=0.595 Sum_probs=70.9
Q ss_pred hcCCCceeecCCC-ceeecCChhhhHHHHHHHHc--CCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCc
Q 002230 507 NNTGGEVVIGEGN-KTEILGTPTETAILEFGLLL--GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (950)
Q Consensus 507 ~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~--g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa 583 (950)
+|+++.+..+++. .....|+|+|.||+.|+... +.+....+..+++++.+||||+||+|+|+++ .++.+.+|+|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 4566666554433 23489999999999999999 4567788899999999999999999999998 334577799999
Q ss_pred hHHHHHhccc
Q 002230 584 SEIILAACDK 593 (950)
Q Consensus 584 ~e~il~~c~~ 593 (950)
||.|+++|++
T Consensus 81 ~e~il~~Ct~ 90 (91)
T PF13246_consen 81 PEVILDRCTH 90 (91)
T ss_pred hHHHHHhcCC
Confidence 9999999985
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.9e-10 Score=124.02 Aligned_cols=68 Identities=31% Similarity=0.381 Sum_probs=60.3
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.|+++|||.||.+||+.|++|+||| |+.+.+|+.||+|..+++-.++.++|+
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 577888888877656 56889999999999999999999999 999999999999998888888888774
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-10 Score=97.67 Aligned_cols=68 Identities=25% Similarity=0.524 Sum_probs=64.0
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHH
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s 186 (950)
+..+++++++.|+++...||++++ +.+|+++||+|.++.++.+++|+.++++|+++++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 346799999999999999999977 99999999999999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.1e-10 Score=120.64 Aligned_cols=144 Identities=18% Similarity=0.234 Sum_probs=102.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee---eCcccc--cC---------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI---EGPEFR--EK--------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~vi---~g~~~~--~~--------------- 715 (950)
.+.+.++++|++|++.|++++++||++...+..+.+++|+... |+..+ .|+.+. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999997532 22111 010000 00
Q ss_pred ----------------------------------------------------CHHHHh---hhh----c-cccE------
Q 002230 716 ----------------------------------------------------SDEELS---KLI----P-KIQV------ 729 (950)
Q Consensus 716 ----------------------------------------------------~~~~~~---~~~----~-~~~v------ 729 (950)
.++++. +.+ . .+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000000 001 0 0111
Q ss_pred EeecCh--hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE--EeccCChhHHHHH
Q 002230 730 MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVTV 802 (950)
Q Consensus 730 ~ar~~P--~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi--vl~~~~~~~i~~~ 802 (950)
+....| ..|...++.+.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|++||+ ++.+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 111222 468899998887766 56888999999999999999999999 999999999996 6777788888887
Q ss_pred HH
Q 002230 803 AK 804 (950)
Q Consensus 803 i~ 804 (950)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 64
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-09 Score=118.90 Aligned_cols=144 Identities=30% Similarity=0.395 Sum_probs=107.1
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-eee-Ccccc---------------------
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AIE-GPEFR--------------------- 713 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~-vi~-g~~~~--------------------- 713 (950)
+.+.+.++|+++++.|+++.++||++...+..+.+++|+... ++. +.. |+.+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999998741 210 000 00000
Q ss_pred ------------------------------------------------cCCH---HHHhh----hhc-cccEEeecCh--
Q 002230 714 ------------------------------------------------EKSD---EELSK----LIP-KIQVMARSSP-- 735 (950)
Q Consensus 714 ------------------------------------------------~~~~---~~~~~----~~~-~~~v~ar~~P-- 735 (950)
.... ++..+ .++ ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0001 11111 111 1223333332
Q ss_pred -------hhHHHHHHHHhhhCCC---EEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 -------MDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 -------~~K~~~V~~l~~~~g~---~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+|...++.+.+++|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 6899999999887673 4999999999999999999999999 8899999999988899999999988864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2e-09 Score=117.24 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=58.8
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC--EEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD--ivl~~~~~~~i~~~i~ 804 (950)
..|...++.+.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++-.++.++|+
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 468888888877666 56889999999999999999999999 99999999988 7777888888888774
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-09 Score=119.34 Aligned_cols=128 Identities=21% Similarity=0.324 Sum_probs=99.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--Ccee-eeCcccccCCHHHHhhhhccccEEe-ecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIA-IEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~v-i~g~~~~~~~~~~~~~~~~~~~v~a-r~~P 735 (950)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..- +..- .+|.- . ..+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l-t-------------g~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL-T-------------GNVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-E-------------eEecCccCCc
Confidence 5799999999999999999999999998889999999998531 0000 01100 0 00110 0234
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
..|...++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..++.||.++...++.++..++
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 689999988877656 5788899999999999999999999 68888999999999988999888765
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.4e-09 Score=112.60 Aligned_cols=142 Identities=25% Similarity=0.335 Sum_probs=101.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-ccc--ccC----------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REK---------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~-~vi~g-~~~--~~~---------------- 715 (950)
.+.+++.++|++|++.|++++++||++...+..+++.+++... ++ .+... ... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 22 11111 100 000
Q ss_pred -------------------CHHHHhhhhcc--ccE-------EeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHH
Q 002230 716 -------------------SDEELSKLIPK--IQV-------MARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (950)
Q Consensus 716 -------------------~~~~~~~~~~~--~~v-------~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~ 764 (950)
..+.+.+.+.+ +.+ .......+|...++.+.+.+| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00011111111 111 111224689999998877655 35899999999999
Q ss_pred hhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 765 al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777776654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.8e-09 Score=113.33 Aligned_cols=144 Identities=25% Similarity=0.302 Sum_probs=103.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-eee---CcccccC----------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AIE---GPEFREK---------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~-vi~---g~~~~~~---------------- 715 (950)
++.+.+.++|+++++.|++++++||++...+..+++.+|+... ++. +.. ++.+...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3788999999999999999999999999999999999998532 221 211 1111000
Q ss_pred -------------------------CHHHHhhhhcc----ccE-----EeecCh--hhHHHHHHHHhhhCC---CEEEEE
Q 002230 716 -------------------------SDEELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVT 756 (950)
Q Consensus 716 -------------------------~~~~~~~~~~~----~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~v 756 (950)
..+++.+.+.+ ..+ +....| ..|...++.+.+++| +.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00111111110 111 112223 358888888877655 468999
Q ss_pred cCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 757 GDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
||+.||.+|++.|++|+||| ++.+.+|+.||++..+++-.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888888774
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.8e-09 Score=110.50 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeC-cccccCCHHHHhhhhccccEEeecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..- +.+.+++ ..+. .. .. ..+.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t------------G~-~~--~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV------------GY-QL--RQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE------------Ce-ee--cCcc
Confidence 57999999999999985 9999999999999999999999631 1111111 0000 00 11 3578
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~g 806 (950)
.|...++.+++. |..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999999877 877889999999999999999999995 5666566555444444577777776554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.6e-09 Score=124.98 Aligned_cols=68 Identities=32% Similarity=0.437 Sum_probs=58.6
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.|.+.+| +.|+++|||.||.+||+.|++||||| |+.+.+|+.||+|..+++-.+|.++|+
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 356666777766655 46888899999999999999999999 999999999999998888889988775
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.5e-09 Score=90.48 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=57.4
Q ss_pred HhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 002230 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (950)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~ 190 (950)
.|++++..||+.++ +++|+++||.|+++.++.+++|+.++++|+++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46788888999877 999999999999999989999999999999999999999999998765
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.4e-09 Score=112.81 Aligned_cols=145 Identities=27% Similarity=0.357 Sum_probs=103.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee--------------------------
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI-------------------------- 707 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~vi-------------------------- 707 (950)
...+.+.+.+++++++++|++++++||+....+..+..++++... +|.++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345778999999999999999999999999999999999998621 11111
Q ss_pred ---------eCcccc---c------------------------------------CCHHH-------HhhhhccccEEee
Q 002230 708 ---------EGPEFR---E------------------------------------KSDEE-------LSKLIPKIQVMAR 732 (950)
Q Consensus 708 ---------~g~~~~---~------------------------------------~~~~~-------~~~~~~~~~v~ar 732 (950)
++..+. . ...++ +.+.++....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000000 0 00111 1111221112222
Q ss_pred -------c--ChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 733 -------S--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 733 -------~--~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
. ...+|...++.+.+.+| +.++++||+.||.+||+.|+.|+||+ ++++..|+.||+++...+=.++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 2 23789999999887655 57888899999999999999999999 99999999999999877667887
Q ss_pred HHH
Q 002230 801 TVA 803 (950)
Q Consensus 801 ~~i 803 (950)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=108.37 Aligned_cols=143 Identities=24% Similarity=0.313 Sum_probs=101.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc---c-cc-cCC-------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---E-FR-EKS------------- 716 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~-~vi~g~---~-~~-~~~------------- 716 (950)
.+.+.+.++|+++++.|++++++||++...+..+++++|+... ++ .+.... . +. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996422 22 111111 0 00 000
Q ss_pred -----------------------HHHHhhhhcc----ccE-----EeecCh--hhHHHHHHHHhhhCC---CEEEEEcCC
Q 002230 717 -----------------------DEELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (950)
Q Consensus 717 -----------------------~~~~~~~~~~----~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~vGDG 759 (950)
.+...+.... ..+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111100 001 111122 588888988877656 568899999
Q ss_pred ccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH----HHHHH
Q 002230 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVA 803 (950)
Q Consensus 760 ~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~----i~~~i 803 (950)
.||.+|++.|++|+||+ ++.+.+|+.||+|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999 999999999999998777777 65555
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.7e-08 Score=110.19 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 457777777766656 46889999999999999999999999 888888999999998888889988774
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.5e-08 Score=105.65 Aligned_cols=115 Identities=27% Similarity=0.328 Sum_probs=90.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eeeCcccccCCHHHHhhhhccccEEe
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (950)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.. +++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 68999999999999999999999999999999999999999753211 22332 333
Q ss_pred -ecChhhHHHHHHHHhhhCCC---EEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEecc
Q 002230 732 -RSSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793 (950)
Q Consensus 732 -r~~P~~K~~~V~~l~~~~g~---~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~ 793 (950)
.+..+.|...++.+.+..|. .+.++|||.||.|||+.|+.+++.. +.+..+..|+..+..
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 34557899999887776563 5888899999999999999999985 555556666665543
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=107.66 Aligned_cols=128 Identities=21% Similarity=0.314 Sum_probs=95.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhhccccEEee-cChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~ 736 (950)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..--. ....+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 589999999999999999999999999999999999999864110 000000000 001111 1233
Q ss_pred hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
.|..+++.+.++.| +.+.++||+.||.+|++.|+++++++ +.+..+++||+++.+++|..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47777776655534 35788999999999999999999885 678888999999999999888764
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-08 Score=100.16 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=80.4
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+|+.|++.|+++.++|+.+...+..+.+.+|+.. .|.... .|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~k--pkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIK--KKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCC--CCHHHHHHHH
Confidence 58999999999999999999999999999999963 232222 2333344333
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
+++| +.++++||+.||.+|++.|++++||+ ++.+..++.||+|...++=.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCC
Confidence 3323 56999999999999999999999999 88999999999998654433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.4e-08 Score=97.17 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=80.7
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhh
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (950)
+|++|++.|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 8999999999999999999999999999999863 22221 345556665544
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC
Q 002230 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (950)
Q Consensus 748 ~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~ 795 (950)
++| +.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 334 57999999999999999999999998 788888999999997554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.2e-08 Score=103.87 Aligned_cols=66 Identities=33% Similarity=0.430 Sum_probs=57.5
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
..|...++.+.+.+| +.++++||+.||.+|++.|++|+||+ ++.+..|+.||+++.+++-.++.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 568888988887655 46899999999999999999999999 8899999999999988777777654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.3e-07 Score=100.36 Aligned_cols=144 Identities=17% Similarity=0.126 Sum_probs=97.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCce-eeeCc--c------cc--cCCHHHHhh---
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNGI-AIEGP--E------FR--EKSDEELSK--- 722 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~----~~~~-vi~g~--~------~~--~~~~~~~~~--- 722 (950)
..+.+.++|++|+++|++++++||+....+..+.+++|+.. .++. +.... . +. .++.+...+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999752 2332 22211 1 00 011110000
Q ss_pred --------------------------------------------------------hhcc--ccEE-----eec--Chhh
Q 002230 723 --------------------------------------------------------LIPK--IQVM-----ARS--SPMD 737 (950)
Q Consensus 723 --------------------------------------------------------~~~~--~~v~-----ar~--~P~~ 737 (950)
.+.+ +.+. -.. .-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000 0000 001 1257
Q ss_pred HHHHHHHHhhhCC-----CEEEEEcCCccCHHhhhcCCcceeecCCCc---HHHHhc--C-CEEeccCChhHHHHHHHH
Q 002230 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 738 K~~~V~~l~~~~g-----~~v~~vGDG~ND~~al~~AdvGiamg~~g~---~~ak~~--a-Divl~~~~~~~i~~~i~~ 805 (950)
|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++. +..|+. | ++|..+++-.++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 7777777766543 45899999999999999999999999 776 357776 4 588888888888887753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.5e-07 Score=101.02 Aligned_cols=145 Identities=15% Similarity=0.108 Sum_probs=96.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eeeeCcc--------c-c-cCCHHHHhhh-
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------F-R-EKSDEELSKL- 723 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~-----~~~-~vi~g~~--------~-~-~~~~~~~~~~- 723 (950)
+-+.+.++|++|+++|++++++||+....+..+++++|+.. .|+ .+..... . . .++.+...++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999842 123 2222100 0 0 0111100000
Q ss_pred ------------------------------------------------------------hc--cccE-----EeecCh-
Q 002230 724 ------------------------------------------------------------IP--KIQV-----MARSSP- 735 (950)
Q Consensus 724 ------------------------------------------------------------~~--~~~v-----~ar~~P- 735 (950)
+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00 0001 001122
Q ss_pred -hhHHHHHHHHhhhCC------CEEEEEcCCccCHHhhhcCCcceeecCCCcHH-----HHhcCCEEeccCChhHHHHHH
Q 002230 736 -MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 -~~K~~~V~~l~~~~g------~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~-----ak~~aDivl~~~~~~~i~~~i 803 (950)
.+|...++.+.+.+| +.|+++|||.||.+||+.|++|+|||....+. .+..+|++....+-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 577777777766534 46889999999999999999999999333232 345789999888888888877
Q ss_pred HH
Q 002230 804 KW 805 (950)
Q Consensus 804 ~~ 805 (950)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 54
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=96.74 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=86.0
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+|+.|++.|+++.++||++...+..+++++|+.. +|. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 68999999999999999999999999999999863 332 2345666666665
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC----hhHHHHHHH
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAK 804 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~----~~~i~~~i~ 804 (950)
+++| +.++|+||+.||.+|++.|+++++++ ++.+..+..||+++...+ +..+.+.+.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 5435 47999999999999999999999998 778888899999996322 445555443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.9e-07 Score=88.52 Aligned_cols=119 Identities=19% Similarity=0.283 Sum_probs=97.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
-.|+.|.++||++.++||++...+..-|+++||.. ++- --.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~q--G~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQ--GISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eee--chHhHHHHHHHHH
Confidence 47999999999999999999999999999999963 222 2358888888887
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC----hhHHHHHHHHHHHHHHHHHH
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQK 815 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~----~~~i~~~i~~gR~~~~~i~k 815 (950)
++++ +.|+++||..||.|+|+..+.++|+. .+.+..++.||+|+.... +..+.++|..++..++-..+
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~~ 167 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEALG 167 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHHh
Confidence 7645 57999999999999999999999998 888888999999997543 55666677666666554443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.7e-07 Score=93.20 Aligned_cols=123 Identities=22% Similarity=0.303 Sum_probs=90.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhhccccEEe--ecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~~P 735 (950)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+..- +.....+.. .+.. -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4689999999999999 99999999999999999999998531 111111110 0111 1247
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE-EeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV-IILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi-vl~~~~~~~i~~~i 803 (950)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++. ++. ++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 7888999988877 788999999999999999999999876 444444455665 443 366666554
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.4e-06 Score=95.26 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=53.3
Q ss_pred hHHHHHHHHhhhCC----CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHH----hcC-CEEe--ccCChhHHHHHHH
Q 002230 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDDNFSTIVTVAK 804 (950)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak----~~a-Divl--~~~~~~~i~~~i~ 804 (950)
+|...++.+.+.+| +.|+++||+.||.+|++.|++|+||+ |+.+..| ..| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67777777665433 78999999999999999999999999 9998888 666 6777 4555677777664
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.9e-07 Score=91.83 Aligned_cols=118 Identities=22% Similarity=0.241 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..--+..+...+-.... +. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 589999999999999999999999999999999999999753111111100000000 11 11223466787
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD 788 (950)
..++.+.+++| +.+.++||+.||.+|++.||++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 77777655434 46899999999999999999999997 44444555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-06 Score=91.92 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC----EEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD----ivl~~~~~~~i~~~i~~ 805 (950)
..|...++.+.+++| ..++++||+.||.+|++.+++|++|+ ++.+..|+.|| ++...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 478888888877756 25788999999999999999999999 88999999999 77777677788887753
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-06 Score=85.86 Aligned_cols=105 Identities=23% Similarity=0.371 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
.+-||+++.++.|++.|.++.++||--..-+..+|.++||+..+. +.. .|+-..- ....-. +
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gf----------d~~~pt--s 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGF----------DTNEPT--S 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccc----------ccCCcc--c
Confidence 467999999999999999999999999999999999999986421 110 1111000 000011 2
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCcceeec
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
...-|..+++.+++.+. +.++|+|||.||.+|+..||.=|+.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 23579999999987633 68999999999999999988766555
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=9.2e-06 Score=85.93 Aligned_cols=125 Identities=26% Similarity=0.363 Sum_probs=85.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhhccccEEee---
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (950)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...+- .....+ ..+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 378999999999999999999999999999999999999963110 000000 001111
Q ss_pred ---cChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhc--CCcceeecCCC-cHHHHhcCCEEeccCChhHHHHH
Q 002230 733 ---SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 733 ---~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~--AdvGiamg~~g-~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
+....|...++.+.+++| +.+.++||+.||..|.++ ++++++.|... .+.....+|+++.+ +..+.+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 112457777877766534 568899999999999888 45556555211 23345568999854 6666543
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.3e-06 Score=86.12 Aligned_cols=133 Identities=17% Similarity=0.154 Sum_probs=88.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhhccccEE--e-e
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--A-R 732 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~--a-r 732 (950)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.... +....+|..+.... |.-..+ . .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccC
Confidence 47899999999999999999999999999999999888754321 12233333322100 000000 0 1
Q ss_pred cChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHh--cCCEEeccCChhHHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE--SADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~--~aDivl~~~~~~~i~~~i~ 804 (950)
| ...|..+++.++.. .+.+.|+|||.||.+|++.||+.+|-+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 141 c-g~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 35799999998876 677899999999999999999988644 21121111 122222 45888877653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.5e-06 Score=87.40 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=98.3
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC------Cce-eeeCc-ccc----------------
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD------NGI-AIEGP-EFR---------------- 713 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~------~~~-vi~g~-~~~---------------- 713 (950)
..+..|...++++++++.|+.++++||+....++.+.+++++..+ ++. +..+. ...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456778999999999999999999999999999999999997654 221 11111 000
Q ss_pred ---------cC-----------------CHHH-------Hhhhhc----cccE-Ee-----ecCh--hhHHHHHHHHhhh
Q 002230 714 ---------EK-----------------SDEE-------LSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (950)
Q Consensus 714 ---------~~-----------------~~~~-------~~~~~~----~~~v-~a-----r~~P--~~K~~~V~~l~~~ 748 (950)
.+ ..+. +.+.+. .+.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 0000 111111 1111 11 1233 6899999998876
Q ss_pred CC---CEEEEEcCCccCHHhhhc-CCcceeecCCCcHHHHhcCC-------EEeccCChhHHHHHHH
Q 002230 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAK 804 (950)
Q Consensus 749 ~g---~~v~~vGDG~ND~~al~~-AdvGiamg~~g~~~ak~~aD-------ivl~~~~~~~i~~~i~ 804 (950)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 55 578999999999999998 67999999 88887776443 5444445567777664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00018 Score=84.08 Aligned_cols=98 Identities=20% Similarity=0.264 Sum_probs=75.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC------------------ccccCCchHH
Confidence 578999999999999999999999999999999999999832 3333322 1145677786
Q ss_pred HHHHHHhhhCCCE-EEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 740 ~~V~~l~~~~g~~-v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
..++... ++. +.++||..||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~~l---~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEAF---GERGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHHh---CccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 6555322 332 578899999999999999999997 44433
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.7e-06 Score=84.54 Aligned_cols=92 Identities=28% Similarity=0.330 Sum_probs=69.2
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh-h--HH
Q 002230 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (950)
Q Consensus 663 ~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-~--K~ 739 (950)
|++.+.|+.++++|++++++||+....+.++++.+|+...+ ++....+.. ......++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~----------~~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDN----------GGGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECT----------TCCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeec----------ccceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997532 111110000 011244555554 4 99
Q ss_pred HHHHHH------hhhCCCEEEEEcCCccCHHhhh
Q 002230 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (950)
Q Consensus 740 ~~V~~l------~~~~g~~v~~vGDG~ND~~al~ 767 (950)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 333 578999999999999986
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.8e-05 Score=82.03 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=94.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-..++.+.... ...-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 45678999999999999999999999999999999999999976433333322211 11234555
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC---cceeecCC-CcHHHHhcCCEEeccCChhHHHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad---vGiamg~~-g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
...+.+.+... .+.++||||..+|+.|-++|+ ||+..|.+ +.+.....+|+++.+ +..+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55555655544 357999999999999999998 77888743 455677779999955 77776654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.7e-05 Score=82.38 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.+..-+++.++|++|++.|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=82.33 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=77.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCc-ccccCCHHHHhhhhccccEE-eec
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGP-EFREKSDEELSKLIPKIQVM-ARS 733 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~-~~~~~~~~~~~~~~~~~~v~-ar~ 733 (950)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..- .......+ .+. .+ +. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~-----------g~--~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYT-----------GN--IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEe-----------CC--ccCCCC
Confidence 456899999999999999999999999999999999999998531 00111000 000 00 00 123
Q ss_pred ChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeec
Q 002230 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
.++.|...++.+.+..+ +.+.++||+.+|.||++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 45788888877655424 36888999999999999999999875
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.3e-05 Score=81.28 Aligned_cols=97 Identities=23% Similarity=0.317 Sum_probs=70.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCc-ccccCCHHHHhhhhccccEE--eecC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGP-EFREKSDEELSKLIPKIQVM--ARSS 734 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~-~~~~~~~~~~~~~~~~~~v~--ar~~ 734 (950)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..- +....+.. .+.. + +. ..+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g-----------~--~~~~~~~~ 139 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTG-----------P--IEGQVNPE 139 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeC-----------c--cCCcccCC
Confidence 3689999999999999999999999999999999999998631 11111000 0000 0 00 1245
Q ss_pred hhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcC
Q 002230 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~A 769 (950)
+..|...++.+++..| +.+.++|||.||.+|++.|
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 6889999988765523 4688999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=4e-05 Score=81.01 Aligned_cols=126 Identities=25% Similarity=0.382 Sum_probs=87.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--h
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (950)
-++.||+.+.++.|++.|+++.++||........+.+..|+...-..++.++.. .+..| +
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~~~ 153 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSL------------------PNKKPDPA 153 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCC------------------CCCCcChH
Confidence 457899999999999999999999999999999999999986432222222211 11223 2
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceee--cCC-CcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giam--g~~-g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
--..+++.++.. .+.+.++||+.||+.+.+.|++ +|.+ |.. ..+.....+|+++ +++..+...+.+
T Consensus 154 ~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 154 PLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 223344444433 3678899999999999999998 4444 311 2344456788888 458888877644
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.9e-05 Score=81.89 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhhccccE--E-ee
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQV--M-AR 732 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v--~-ar 732 (950)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... ....+|+.+.... |.-.. + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k--------p~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW--------PHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec--------cCCcccccccc
Confidence 68999999999999999999999999999999999988 64311 1112232211000 00000 0 00
Q ss_pred cChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHh--cCCEEeccCChhHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE--SADVIILDDNFSTIVTVA 803 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~--~aDivl~~~~~~~i~~~i 803 (950)
+ ...|..+++.++.. ...+.|+|||.||.+|.++||+.++-+ .-.+.+++ .+.+.+ ++|..+...+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1 13488888888776 567899999999999999999977632 11122222 233333 4577777655
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.3e-05 Score=87.22 Aligned_cols=143 Identities=18% Similarity=0.174 Sum_probs=93.0
Q ss_pred CCccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------c-eeeeCccccc------------------
Q 002230 661 MRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDN------G-IAIEGPEFRE------------------ 714 (950)
Q Consensus 661 lr~~~~~~I-~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~------~-~vi~g~~~~~------------------ 714 (950)
+.+...+++ +++++.|+.++++||+.......+.++.++..+. + .+..+.....
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 8899999999999999999999999999987653 1 1111110000
Q ss_pred -----C--------------------CHHH-------Hhhhhc----cccE------EeecCh--hhHHHHHHHHhhhC-
Q 002230 715 -----K--------------------SDEE-------LSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL- 749 (950)
Q Consensus 715 -----~--------------------~~~~-------~~~~~~----~~~v------~ar~~P--~~K~~~V~~l~~~~- 749 (950)
+ .++. +.+.+. .+.+ +....| ..|...++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 0101 111111 1111 112233 57999999988776
Q ss_pred --C---CEEEEEcCCccCHHhhhcCC-cceeecCCCcHHHHhcC--------CEEec-cCChhHHHHHHH
Q 002230 750 --G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVIIL-DDNFSTIVTVAK 804 (950)
Q Consensus 750 --g---~~v~~vGDG~ND~~al~~Ad-vGiamg~~g~~~ak~~a--------Divl~-~~~~~~i~~~i~ 804 (950)
| +.++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-.+|.++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 4 47889999999999999999 699999 8888877643 55543 334566777664
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=4e-05 Score=78.46 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=77.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee-cChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~~ 737 (950)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+..--..+++++.... ....+.-...++.++.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCC
Confidence 37899999999999999999999999999999999999998542222332222110 00000000011111111 12246
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
|..+++.+++++.+.+.++|||.||..|.++||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999876524678899999999999999987664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0001 Score=77.72 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
-+.++++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.86 E-value=7.8e-05 Score=77.71 Aligned_cols=125 Identities=19% Similarity=0.267 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+..--+.++..++. ...+..|+-=.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC----------------CCCCCChHHHH
Confidence 67899999999999999999999999999999999999985421122222110 01112222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee---ecC-CCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia---mg~-~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+++.++-. .+.++|+||+.+|..+-++|++... -|. ...+..++.+|+++.+ +..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 333334333 3679999999999999999998633 331 2223466789999844 66666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.9e-05 Score=73.38 Aligned_cols=114 Identities=20% Similarity=0.131 Sum_probs=75.1
Q ss_pred eccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 656 ~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
.-..++++++.+.++.|++.|++++++||.....+....+.+|+......++......................+.+..|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 44568999999999999999999999999999999999999998432222222111100000000000011113335556
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
..+..+.+.+... .+.+.++||+.||..|++.++
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcC
Confidence 6666666666544 567899999999999999843
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00015 Score=78.67 Aligned_cols=137 Identities=12% Similarity=0.234 Sum_probs=87.8
Q ss_pred CCCccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceee---eCcc-cccC-----------------
Q 002230 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGIAI---EGPE-FREK----------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~-aGi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~vi---~g~~-~~~~----------------- 715 (950)
.+-+++.++|++|++ .|++++++||+....+..+.+.+++. ..++..+ .+.. ...+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999998 79999999999999999888777632 2222111 0100 0000
Q ss_pred ---------------------C--HHHHhhh-------hccccE-----EeecCh--hhHHHHHHHHhhhCC---CEEEE
Q 002230 716 ---------------------S--DEELSKL-------IPKIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (950)
Q Consensus 716 ---------------------~--~~~~~~~-------~~~~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~ 755 (950)
. ++.+.++ .+...+ +....| .+|...++.+.+.+| +.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0 1111111 111111 112223 588888888776655 57888
Q ss_pred EcCCccCHHhhhcC----CcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 756 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 756 vGDG~ND~~al~~A----dvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
+||+.||.+|++.+ +.||+|| ++. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 447787754 55555444
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=77.22 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~ 701 (950)
+..-+.+.++|++|++.||.++++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00036 Score=76.14 Aligned_cols=124 Identities=18% Similarity=0.274 Sum_probs=81.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-- 736 (950)
.++.|++.+.++.|++.|+++.++|+.+...+..+....|+...-+.++.+++. .+..|.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~------------------~~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTL------------------PQKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCC------------------CCCCCCcH
Confidence 468899999999999999999999999999999999988885422222222210 111221
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eee--cCC-CcHHHHhcCCEEeccCChhHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iam--g~~-g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
-=..+.+.+.-. .+.++++||+.||+.+.+.|++. +.+ |-. ..+..+..+|+++. ++..+.+++
T Consensus 162 ~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 162 ALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 112233333222 35789999999999999999973 333 311 12234457999884 477666543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00032 Score=73.41 Aligned_cols=121 Identities=18% Similarity=0.258 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (950)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-+.++.+++. .+..|. -
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~p~~ 146 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKPHPDP 146 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCCChHH
Confidence 57899999999999999999999999999999999999986432222222211 112232 1
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-e--cCCC-cHHHHhcCCEEeccCChhHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-m--g~~g-~~~ak~~aDivl~~~~~~~i~~ 801 (950)
=..+.+.+... .+.++++||+.+|..+.+.|++... + |-.. .+.....+|+++.+ +..+..
T Consensus 147 ~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 12222333222 2568899999999999999998643 2 2111 12334568988744 665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00039 Score=72.96 Aligned_cols=125 Identities=18% Similarity=0.186 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+..--..++.+++.. .....|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC----------------CCCCCcHHHH
Confidence 367999999999999999999999999999999999999864222232222110 0112233223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc---eeecCCCc-HHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG---iamg~~g~-~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+... .+.++++||+.+|..+-++|++- +.-|.... +.....+|+++.+ +..+.+++
T Consensus 146 ~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 334443322 35688999999999999999984 33341122 2334568988754 77777654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00037 Score=82.85 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=36.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.-+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356799999999999999999999999999999999974
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00053 Score=71.32 Aligned_cols=116 Identities=23% Similarity=0.408 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC--CccCCceee-e-Cccc-cc--------------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI-E-GPEF-RE-------------------- 714 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~g--i~~~~~~vi-~-g~~~-~~-------------------- 714 (950)
++.+.+.+++++|++.|++++++||+....+..+.++++ +...++..+ . +... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999998754 223333211 1 1100 00
Q ss_pred -C---------------------C----HH---HHhhhh-------ccccEEe------ecCh--hhHHHHHHHHhhhCC
Q 002230 715 -K---------------------S----DE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (950)
Q Consensus 715 -~---------------------~----~~---~~~~~~-------~~~~v~a------r~~P--~~K~~~V~~l~~~~g 750 (950)
+ . +. ++.+.+ +.+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 0 00 000000 1122221 1223 789999999877655
Q ss_pred ---CEEEEEcCCccCHHhhhcCCcceee
Q 002230 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (950)
Q Consensus 751 ---~~v~~vGDG~ND~~al~~AdvGiam 775 (950)
+.++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4689999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00068 Score=71.98 Aligned_cols=127 Identities=18% Similarity=0.199 Sum_probs=86.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+.. .....|+-=.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999998888889999864322333332210 1122333233
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee---ecCC-Cc-HHHHhcCCEEeccCChhHHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia---mg~~-g~-~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+++.+.-. .+.++|+||+.||..|-+.|++... -|-. .. +.....+|+++.+ +..+.+.+.|
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPATW 226 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHhcC
Confidence 444444433 4679999999999999999998642 2311 11 1234568999854 7777766554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00049 Score=73.96 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=42.2
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhcC-CcceeecCCCcHHHHhcCCEE
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 790 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~A-dvGiamg~~g~~~ak~~aDiv 790 (950)
.+|..-++.|.++ .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 5788888888877 577888999 99999999976 5667767 8888877766544
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0028 Score=68.26 Aligned_cols=134 Identities=16% Similarity=0.211 Sum_probs=83.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee-cCh--
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSP-- 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P-- 735 (950)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...+..++... +..-.+. +... ..|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dG----------vltG~~~P~i 188 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDG----------VLKGFKGPLI 188 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCC----------eEeCCCCCcc
Confidence 4679999999999999999999999999999999999999865443221110 0000000 1110 111
Q ss_pred --hhHHHHHH-HHhhhCC-----CEEEEEcCCccCHHhhhcC-C--cceeecC-CC-c----HHHHhcCCEEeccCChhH
Q 002230 736 --MDKHTLVK-HLRTTLG-----EVVAVTGDGTNDAPALHEA-D--IGLAMGI-AG-T----EVAKESADVIILDDNFST 798 (950)
Q Consensus 736 --~~K~~~V~-~l~~~~g-----~~v~~vGDG~ND~~al~~A-d--vGiamg~-~g-~----~~ak~~aDivl~~~~~~~ 798 (950)
..|...+. ...+.++ ..|.++|||.||++|..-. . --+.+|- +. . +.-+++=|||+.+|.=..
T Consensus 189 ~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~ 268 (277)
T TIGR01544 189 HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLE 268 (277)
T ss_pred cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCch
Confidence 35555443 2222222 5788999999999996533 1 1122221 11 1 225678899999988777
Q ss_pred HHHHH
Q 002230 799 IVTVA 803 (950)
Q Consensus 799 i~~~i 803 (950)
++..|
T Consensus 269 v~~~i 273 (277)
T TIGR01544 269 VANSI 273 (277)
T ss_pred HHHHH
Confidence 77654
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00096 Score=70.44 Aligned_cols=120 Identities=17% Similarity=0.255 Sum_probs=80.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
-++.||+.++++.|++.|+++.++|+........+.+..||..--..++.+.+. ....|...
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~~~ 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKL------------------PYSKPHPE 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccC------------------CCCCCCHH
Confidence 357899999999999999999999999999999999999986533333333221 01123221
Q ss_pred HHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCc---HHHHhcCCEEeccCChhHHH
Q 002230 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~---~~ak~~aDivl~~~~~~~i~ 800 (950)
-+.+.+++. | +.++++||..||+.+-+.|++....-..+. +.-...+|+++.+ |..+.
T Consensus 153 -~~~~~~~~~-~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 153 -VYLNCAAKL-GVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred -HHHHHHHHc-CCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 222333332 4 568999999999999999998654321221 2223357877743 66554
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0021 Score=69.95 Aligned_cols=119 Identities=16% Similarity=0.229 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.+...+..+.+.+|+...-..++.+++ .+ .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------IL-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------CC-CCH
Confidence 5679999999999999999999999999999999999998643222332221 11 122
Q ss_pred HHHH-HHhhh--CCCEEEEEcCCccCHHhhhcCCccee---ecCCCc-HHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVK-HLRTT--LGEVVAVTGDGTNDAPALHEADIGLA---MGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~-~l~~~--~g~~v~~vGDG~ND~~al~~AdvGia---mg~~g~-~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.... .+++. ..+.++|+||+.+|+.+-++|++-.. -|.... +.....+|+++. ++..+.+++
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 2222 22222 03568999999999999999998533 231111 123456899884 477777654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0024 Score=66.73 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=74.3
Q ss_pred CCCccHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~-~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+..... ++ |.++..... .++ .-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999996 7888999999999999999999999966643211 22 222221000 000 1123666899
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeec
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
..-++..-....+...+-||+.||.|||+.||.+++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777543211244556799999999999999999885
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0024 Score=67.22 Aligned_cols=124 Identities=23% Similarity=0.287 Sum_probs=82.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhhccccEEeecCh-
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P- 735 (950)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..-..++.+.+.. +..|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------------------CCCCC
Confidence 478999999999999999999999999999999999999986 3223333333211 1223
Q ss_pred -hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeec-CCCc---H-HHHhcCCEEeccCChhHHHHH
Q 002230 736 -MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG-IAGT---E-VAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 736 -~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg-~~g~---~-~ak~~aDivl~~~~~~~i~~~ 802 (950)
+-=....+.+.-...+.++|+||+.+|+.+-+.|++..+++ ..|. + .....+|+++.+ +..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHHHHh
Confidence 21122222222110256999999999999999999986221 1322 1 223457887743 6665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0052 Score=76.57 Aligned_cols=169 Identities=17% Similarity=0.233 Sum_probs=102.2
Q ss_pred HHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeec--cCCCCccHHHHHHHHHH-CCCEEEEEcCCCHH
Q 002230 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI--KDPMRPGVKESVAICRS-AGITVRMVTGDNIN 688 (950)
Q Consensus 612 ~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i--~D~lr~~~~~~I~~l~~-aGi~v~m~TGD~~~ 688 (950)
++.....|.+...|.+++-| |.|++....- ...+.+++.+++++|.+ .|+.|+++||+...
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~----------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY----------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred HHHHHHHHHhccceEEEEec----------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 34555666555567666543 3444432111 12366899999999999 69999999999999
Q ss_pred HHHHHHHHcCC--ccCCceeee--CcccccC-----------------------------------------CH------
Q 002230 689 TAKAIARECGI--LTDNGIAIE--GPEFREK-----------------------------------------SD------ 717 (950)
Q Consensus 689 ta~~ia~~~gi--~~~~~~vi~--g~~~~~~-----------------------------------------~~------ 717 (950)
.........++ ..+++..+. |..+... ++
T Consensus 544 ~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~ 623 (726)
T PRK14501 544 TLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEAR 623 (726)
T ss_pred HHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHH
Confidence 88887665552 223332221 1111000 00
Q ss_pred -HHHhhhh----c--cccEE-------eecChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcC---CcceeecCCC
Q 002230 718 -EELSKLI----P--KIQVM-------ARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEA---DIGLAMGIAG 779 (950)
Q Consensus 718 -~~~~~~~----~--~~~v~-------ar~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~A---dvGiamg~~g 779 (950)
+++.+.+ . .+.+. .+..-.+|...++.+.+..+ ..++++||+.||.+|++.+ +.+++|| ++
T Consensus 624 a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~ 702 (726)
T PRK14501 624 ANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG 702 (726)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC
Confidence 0111111 0 11111 12223689988888876522 5799999999999999986 6889998 43
Q ss_pred cHHHHhcCCEEeccCChhHHHHHH
Q 002230 780 TEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 780 ~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
+.+|++.+.+ -..+.+++
T Consensus 703 ----~s~A~~~l~~--~~eV~~~L 720 (726)
T PRK14501 703 ----ESRARYRLPS--QREVRELL 720 (726)
T ss_pred ----CCcceEeCCC--HHHHHHHH
Confidence 5678898875 34555544
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0036 Score=65.56 Aligned_cols=105 Identities=16% Similarity=0.100 Sum_probs=74.2
Q ss_pred CCCccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccE-EeecChhh
Q 002230 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV-MARSSPMD 737 (950)
Q Consensus 660 ~lr~~~~~~I-~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v-~ar~~P~~ 737 (950)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+.... .++ |.++... ....+ -..|.-+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~~---------~tg~~~g~~c~g~~ 163 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQRR---------YGGWVLTLRCLGHE 163 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEEE---------EccEECCccCCChH
Confidence 4589999999 5788899999999999999999999999963211 122 2222110 00001 12366689
Q ss_pred HHHHHHHH-hhhCCCEEEEEcCCccCHHhhhcCCcceeec
Q 002230 738 KHTLVKHL-RTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 738 K~~~V~~l-~~~~g~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
|..-++.. ... .....+-||+.||.|||+.|+.+++++
T Consensus 164 K~~~l~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 164 KVAQLERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHHhCCC-cceEEEecCCcccHHHHHhCCCCEEEC
Confidence 98877754 322 344556699999999999999999885
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0031 Score=68.01 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+..-- +.++.+++. .+..|. .
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP~-p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRPA-P 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCCC-H
Confidence 46789999999999999999999999999999999999986431 333333321 112332 2
Q ss_pred HHHHHHHhhh---CCCEEEEEcCCccCHHhhhcCCcc
Q 002230 739 HTLVKHLRTT---LGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 739 ~~~V~~l~~~---~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+.+.+++. ..+.++||||..+|+.+-+.|++-
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 2333344333 024589999999999999999974
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0034 Score=67.91 Aligned_cols=122 Identities=13% Similarity=0.164 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..--..++.+.+.. .....|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999999999999865434455554321 0112222222
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce-eecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi-amg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
..++.+.-. .+.++|+||..+|+.+-+.|++-. ++...+.......+|+++.+ +..+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 333333333 356899999999999999999843 22212222223457888744 55544
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0034 Score=67.53 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..--..++.+++.. .....|+-=.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~----------------~~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE----------------HAKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC----------------CCCCChHHHH
Confidence 468899999999999999999999999999999999999875333444444321 0122233333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-e--cCCCcHHHHhcCCEEecc
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAGTEVAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-m--g~~g~~~ak~~aDivl~~ 793 (950)
...+.++-. .+.++|+||..+|+.+-++|++-.. + |....+.....+|+++.+
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 344444433 3668999999999999999998532 2 211112234468888855
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0026 Score=68.32 Aligned_cols=69 Identities=22% Similarity=0.269 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHH-----HHhc---CCE-EeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKES---ADV-IILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~-----ak~~---aDi-vl~~~~~~~i~~~i 803 (950)
..|...|+.|++++| +.|.++||+.||.+||..++-||.+| |+.+. .... ..+ .-....-.+|.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 789999999988765 35677899999999999999999999 66655 2221 223 33344455666666
Q ss_pred HH
Q 002230 804 KW 805 (950)
Q Consensus 804 ~~ 805 (950)
+|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0038 Score=67.92 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..-. +.++.+++. ....|. .
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP~-p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRPY-P 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCCC-h
Confidence 46789999999999999999999999999888888887765321 223322221 111232 2
Q ss_pred HHHHHHHhhhCC----CEEEEEcCCccCHHhhhcCCc---ceeecCCC------------------------cHHHHhcC
Q 002230 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAG------------------------TEVAKESA 787 (950)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~vGDG~ND~~al~~Adv---Giamg~~g------------------------~~~ak~~a 787 (950)
.-+.+.+++. | +.++||||+.+|+.+-+.|++ |+.-|... .+.....+
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 2233334333 3 468999999999999999997 44444110 12234568
Q ss_pred CEEeccCChhHHHHHH
Q 002230 788 DVIILDDNFSTIVTVA 803 (950)
Q Consensus 788 Divl~~~~~~~i~~~i 803 (950)
|+++.+ +..+...+
T Consensus 241 ~~vi~~--~~~l~~~l 254 (267)
T PRK13478 241 HYVIDT--IADLPAVI 254 (267)
T ss_pred Ceehhh--HHHHHHHH
Confidence 888844 77776654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0018 Score=67.03 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=68.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..--..++.+++ +..+..|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455677889999999999999999999999999999999998643333333322 112334444
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcC
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~A 769 (950)
-..+.+.+.-. .+.++|+||+.+|+.+-+.|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 44555555444 46789999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0095 Score=60.31 Aligned_cols=141 Identities=22% Similarity=0.275 Sum_probs=92.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc--------------------cCCHHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR--------------------EKSDEE 719 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~--------------------~~~~~~ 719 (950)
.+-||+.++.+.+++. ...+++|-...+-+.++|..+|+...+-.+ +--+++ .++.++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~-Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHG-TEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcccccc-ccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4568999999999876 566777777888899999999996532100 000011 011111
Q ss_pred HhhhhccccEEeecCh---------------hhHHHHHHHHhhhCC--CEEEEEcCCccCHHhhhcCC-c-ceeecCCCc
Q 002230 720 LSKLIPKIQVMARSSP---------------MDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-I-GLAMGIAGT 780 (950)
Q Consensus 720 ~~~~~~~~~v~ar~~P---------------~~K~~~V~~l~~~~g--~~v~~vGDG~ND~~al~~Ad-v-Giamg~~g~ 780 (950)
+.+.+.. +|.|..| ..|+++++.+.+.-+ ...+++||++.|..||+++. - |+|+.-||.
T Consensus 161 lfe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 161 LFEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1111111 3445555 345566665554422 34678899999999999884 2 366666899
Q ss_pred HHHHhcCCEEeccCChhHHHHHHH
Q 002230 781 EVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 781 ~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+-|...||+.+...+..+...+|.
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 999999999999888888777764
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0032 Score=66.68 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=63.4
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 4445999999999999999999998 7779999999999965333333333211 0112
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
+|. ..+++. | .++|+||..||..+-++|++-
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 233 234444 5 478999999999999999874
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0088 Score=70.46 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=83.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+..--..++.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 678999999999999999999999999999999999999865323344443311 112332
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecC-CCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~-~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+...+++..-+.+.++||+.+|+.+-+.|++- |.+.- .+.+.....+|+++.+ +..+.+++.
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 222233322135799999999999999999984 33321 1222223458998844 777776553
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0095 Score=62.69 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--hh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~~ 737 (950)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+.. ...++++++. .+..| +-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~------------------~~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERV------------------KRGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHh------------------cCCCCCcHH
Confidence 478999999999999999999999988777777777777732 2223332221 11233 22
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCc-HHHHhcCCEEecc
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-EVAKESADVIILD 793 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~-~~ak~~aDivl~~ 793 (950)
=....+.+.-. .+.++|+||..+|+.+-+.|++. |++. .+. ......+|+++.+
T Consensus 144 ~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 144 YLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 22333333333 36799999999999999999984 4443 332 2233457877644
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0093 Score=59.24 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=68.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCceeee-CcccccCCHHHHhhhhcccc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAIE-GPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~---~ia~~~---g--i~~~~~~vi~-g~~~~~~~~~~~~~~~~~~~ 728 (950)
+|.+.|++++++++++++|++++++||+....+. ....++ | +.. ..++.. |..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999988874 555552 3 321 122222 221111100 0
Q ss_pred EEeecChh-hHHHHHHHHhhhC----CCEEEEEcCCccCHHhhhcCCcc
Q 002230 729 VMARSSPM-DKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 729 v~ar~~P~-~K~~~V~~l~~~~----g~~v~~vGDG~ND~~al~~AdvG 772 (950)
+. ...|+ .|...++.+++.+ ...++..||+.+|+.+-++++|-
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22 22343 4888888777632 36778899999999999987654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0092 Score=60.38 Aligned_cols=112 Identities=15% Similarity=-0.034 Sum_probs=63.7
Q ss_pred CceEEEeeeeccC----CCCccHHHHHHHHHHCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeeeCccccc
Q 002230 647 EGYTCIGIVGIKD----PMRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIEGPEFRE 714 (950)
Q Consensus 647 ~~l~~lG~~~i~D----~lr~~~~~~I~~l~~aGi~v~m~TGD~~~--------ta~~ia~~~gi~~~~~~vi~g~~~~~ 714 (950)
.|.++.|-..+.+ ++-||+.+.++.|++.|+++.++|+.... ......+..|+.. ++.+.....
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~----~~~~~~~~~ 86 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD----IYLCPHKHG 86 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE----EEECcCCCC
Confidence 4445544433332 36899999999999999999999987631 2233344556532 111000000
Q ss_pred CCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 715 ~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
.-.-..+..|+-=..+++.+... -+.+.|+||..+|+.+-++|++-..
T Consensus 87 -----------~~~~~~KP~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 87 -----------DGCECRKPSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 00000112222223334444322 3579999999999999999998543
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.014 Score=65.81 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (950)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..||..--+.++.+++.. +..|. -
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------------------CCCCCHHH
Confidence 467999999999999999999999999999999999999865333444443311 12332 2
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-ecCCCcHHH-HhcCCEEeccCChhHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEVA-KESADVIILDDNFSTI 799 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-mg~~g~~~a-k~~aDivl~~~~~~~i 799 (950)
=...++.+.-. .+.++|+||..+|+.|-+.|++-.. +. .+.... ...+|+++.+ +..+
T Consensus 278 fl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 23334444433 4679999999999999999998532 22 322222 2358888744 5554
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.014 Score=56.12 Aligned_cols=91 Identities=21% Similarity=0.197 Sum_probs=62.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEE
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~--------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 730 (950)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~--------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP--------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC---------------------
Confidence 4678999999999999999999999998 7778888898888521 001111
Q ss_pred eecCh--hhHHHHHHHHh-hhCCCEEEEEcC-CccCHHhhhcCCcc
Q 002230 731 ARSSP--MDKHTLVKHLR-TTLGEVVAVTGD-GTNDAPALHEADIG 772 (950)
Q Consensus 731 ar~~P--~~K~~~V~~l~-~~~g~~v~~vGD-G~ND~~al~~AdvG 772 (950)
....| +-=..+.+.++ -. .+.++|+|| ..+|+.+-+.|++-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCCe
Confidence 01122 21123333331 22 367999999 59999999988763
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0082 Score=63.59 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~----~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
.+.|++.+.++.+++.|+++.++||+. ..++..+.+..|+. .....++.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 367789999999999999999999964 66999999999994 221222222210
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
.-.+|.. .+++. | .++++||..+|..+-++|++-
T Consensus 173 ~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 0134544 34433 4 478899999999999999884
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.013 Score=61.50 Aligned_cols=94 Identities=17% Similarity=0.195 Sum_probs=66.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+-+...+....+.+|+..--+.++.+.+. .+..|...
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~~- 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHPK- 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCHH-
Confidence 47899999999999999999999999988888888999986432233333221 12233222
Q ss_pred HHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 740 TLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 740 ~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
.+...+++. ..+.++|+||.. +|+.+-+.|++-
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 222333332 035789999998 999999999884
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.021 Score=58.18 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=70.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
.+.||+.+.+++|++.|+++.++|..+. .....+-+..|+... .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC----------
Confidence 3579999999999999999999998762 111223344555211 1111000000
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce-eecCCCcH---HHHhcC--CEEeccCChhH
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTE---VAKESA--DVIILDDNFST 798 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi-amg~~g~~---~ak~~a--Divl~~~~~~~ 798 (950)
...-.....|+--..+.+.+.-. .+.++|+||..+|+.+-+.|++.. .+. .|.. .....+ |+++.+ +..
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l~e 171 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--LAD 171 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--HHH
Confidence 00001112233233444444433 367999999999999999999742 222 2221 122335 777743 777
Q ss_pred HHHHH
Q 002230 799 IVTVA 803 (950)
Q Consensus 799 i~~~i 803 (950)
+.+++
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 66654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.012 Score=60.77 Aligned_cols=95 Identities=11% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+...-+.++..++. ....|...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~~~ 153 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPAPQV 153 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCCHHH
Confidence 46899999999999999999999999999999999999985422223332221 12233321
Q ss_pred -HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 739 -~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
..+.+.+.-. .+.++++||+.+|+.+-+.|++-.
T Consensus 154 ~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 154 YQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcE
Confidence 2233333322 357889999999999999988753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=62.37 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=49.6
Q ss_pred ecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcC--------CcceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 732 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 732 r~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~A--------dvGiamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
+..+.+|...++.+.+.++ ..++++||+.||.+|++.+ ..|++|+ .|. .+..|++++.+ ...+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~--~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTG--PQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCC--HHHHH
Confidence 4455788888888766544 4689999999999999999 5788885 332 35668998864 66666
Q ss_pred HHH
Q 002230 801 TVA 803 (950)
Q Consensus 801 ~~i 803 (950)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0084 Score=61.07 Aligned_cols=91 Identities=13% Similarity=0.222 Sum_probs=61.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+...-+.++++.+. .+..|. ..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhc------------------CCCCCC-hH
Confidence 5789999999999999999999997532 45677888886432333333221 122332 22
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcc
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvG 772 (950)
.+-+.+++. | +.+.||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~-~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGL-GVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHc-CCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222233322 3 4688999999999999999884
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.017 Score=61.14 Aligned_cols=95 Identities=11% Similarity=0.082 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh--
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD-- 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~-- 737 (950)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+..--+.++.+.+. .+..|..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~p~~ 154 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKEDQRL 154 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCCHHH
Confidence 57899999999999999999999999888888888888886422223322221 1223321
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
=..+.+.+.-. .+.++|+||..+|+.+-+.|++..
T Consensus 155 ~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 155 WQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeE
Confidence 11222222222 356899999999999999999963
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.019 Score=58.17 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=63.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-..++.+.+.. .....|+-=.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999988877 66656688854322333332211 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv 771 (950)
.+.+.+... .+.+.++||...|+.+-+++++
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCC
Confidence 333333333 4678999999999999998887
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.012 Score=65.32 Aligned_cols=109 Identities=13% Similarity=0.005 Sum_probs=75.5
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
..+++.|++.+.++.|++.|+++.++||.....+..+.+.+|+....-..+.|.+. ....+... --.+..|+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~-------~~~~~~~~-~~~kp~p~ 255 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP-------DMHFQREQ-GDKRPDDV 255 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc-------hhhhcccC-CCCCCcHH
Confidence 57899999999999999999999999999999999999999886310011111110 00000000 01244566
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
-+...++.+....-+.++|+||..+|+.+-+.|++..
T Consensus 256 ~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 256 VKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 6777766654321378999999999999999999864
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.069 Score=60.34 Aligned_cols=63 Identities=21% Similarity=0.259 Sum_probs=47.3
Q ss_pred hhHHHHHHHHhhhCC-----C-EEEEEcCCccCHHhhhc-----CCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g-----~-~v~~vGDG~ND~~al~~-----AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+|...|+.+.+.+| . .++++||+.||.+|++. +++||+|| +|... -.|++.+.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 499999998877655 1 25899999999999996 68999999 55442 357888755 56666554
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.021 Score=60.04 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++.|++.+.++.|++. +++.++|+-....+..+.+++|+..--+.++.+.+. ....|...
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCCHHH
Confidence 5689999999999999 999999999999999999999986432223322211 11233222
Q ss_pred -HHHHHHH-hhhCCCEEEEEcCCc-cCHHhhhcCCcce-eecC-CCcHHHHhcCCEEeccCChhHHHH
Q 002230 739 -HTLVKHL-RTTLGEVVAVTGDGT-NDAPALHEADIGL-AMGI-AGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 739 -~~~V~~l-~~~~g~~v~~vGDG~-ND~~al~~AdvGi-amg~-~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
...++.+ .-. .+.+++|||+. +|+.+-+.+++-. ...- ...+.....+|.++.+ +..+..
T Consensus 158 ~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred HHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECC--HHHHHh
Confidence 3333444 222 35689999998 8999999999732 2220 1121223356777643 665554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.036 Score=58.47 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|+ .|+++.++|......+...-+..|+...-+.++.+.+. ....|. ..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~-p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKPD-VA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCCC-HH
Confidence 36899999999999 68999999999888888888888885422222222211 012332 12
Q ss_pred HHHHHHhhh---CCCEEEEEcCCc-cCHHhhhcCCcc-eeecCCCcH-HHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTT---LGEVVAVTGDGT-NDAPALHEADIG-LAMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~---~g~~v~~vGDG~-ND~~al~~AdvG-iamg~~g~~-~ak~~aDivl~~~~~~~i~~~i 803 (950)
-+.+.+++. ..+.+++|||.. +|+.+-+.|++- |.....+.+ .....+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 222233322 124799999998 799999999985 333211211 112247888744 77776544
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.025 Score=55.66 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC----CccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~g----i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
.++|+.++.++.+++.+++++++|+-...-...+-...+ |.. .+++-+...+.. --+.-.+....+|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~-idi~sn~~~ih~--------dg~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC-IDIVSNNDYIHI--------DGQHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee-eEEeecCceEcC--------CCceeeecCCccc
Confidence 478999999999999999999999888777777777665 221 001000000000 0000001111222
Q ss_pred --hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 736 --MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 736 --~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
.+|...|+.+++. .+.+.++|||+.|.+|-+..|+=+|
T Consensus 144 fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 6899999999988 8889999999999999998888774
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.016 Score=58.90 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=62.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
-++.||+.+.++.|++.|+++.++|+. ..+..+.+.+|+..--..++.+.+. .+..|...
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCChH
Confidence 368999999999999999999999987 5677888888885322222222111 12233221
Q ss_pred --HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 739 --~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+.+.+.-. .+.++++||+.+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCe
Confidence 1222222222 25688999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.053 Score=54.67 Aligned_cols=113 Identities=11% Similarity=0.070 Sum_probs=72.7
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccc
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD-~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (950)
.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+...+|+..... . ..+...+..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------~------~~~~~~Fd~i 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------T------VPMHSLFDDR 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------c------ccHHHhceee
Confidence 3345555566688999999999999999999999976 8899999999999852110 0 0000001010
Q ss_pred cEEeecChhhH--HHHHHHHhhhC-----CCEEEEEcCCccCHHhhhcCCccee
Q 002230 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 728 ~v~ar~~P~~K--~~~V~~l~~~~-----g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
+.+...+..| ..+.+.+.+.. -+.++|+||...|+.+-++|++-..
T Consensus 102 -v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 102 -IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred -eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 2222111122 23344444321 2579999999999999999988654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.015 Score=58.10 Aligned_cols=96 Identities=21% Similarity=0.263 Sum_probs=68.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh-
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM- 736 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~- 736 (950)
..++.|++.+.++.|++.|++++++|+..........+.+|+...-+.++...+.. ...|.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------------------~~Kp~~ 136 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG------------------SRKPDP 136 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS------------------SSTTSH
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh------------------hhhhHH
Confidence 34578999999999999999999999999999999999999873222333222211 11222
Q ss_pred -hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 737 -DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 737 -~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
-=..+++.+.-. .+.++++||+..|+.+-+.||+-
T Consensus 137 ~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence 112333344333 46799999999999999999874
|
... |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.035 Score=63.61 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=74.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~-~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (950)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...-+.++.+++. .+..| +
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v------------------~~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV------------------EKGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc------------------CCCCCCHH
Confidence 467999999999999999999999999888877665 67875433334333321 12233 2
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce-eecCCCc--HHHHhcCCEEecc
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGT--EVAKESADVIILD 793 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi-amg~~g~--~~ak~~aDivl~~ 793 (950)
-=..+++.+.-. .+.++|+||+.+|+.+-+.|++.. .+. .+. +.....+|.++.+
T Consensus 155 ~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 155 IFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 222333333333 467899999999999999999863 333 222 2233456666533
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.041 Score=60.46 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=74.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-CC-ceeeeCcccccCCHHHHhhhhccccEEeecChh-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM- 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~-~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~- 736 (950)
++.||+.+.++.|++.|+++.++|+-+......+-+..+... .+ -.++.+.+ +....|.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~------------------~~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD------------------VPKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc------------------cCCCCCCH
Confidence 578999999999999999999999998888877766553221 01 01112221 1112222
Q ss_pred -hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCc--HHHHhcCCEEeccCChhHHH
Q 002230 737 -DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT--EVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 737 -~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~--~~ak~~aDivl~~~~~~~i~ 800 (950)
-=..+.+.+.-. .+.++||||+.+|+.+-+.|++....-..|. ......+|+++.+ +..+.
T Consensus 206 ~~~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~--~~~l~ 269 (286)
T PLN02779 206 DIYNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC--LGDVP 269 (286)
T ss_pred HHHHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC--hhhcc
Confidence 223333444333 3679999999999999999998654322332 1112358888743 44443
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.068 Score=56.43 Aligned_cols=111 Identities=23% Similarity=0.360 Sum_probs=72.8
Q ss_pred CCCccHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc-cccEEeecCh-
Q 002230 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP-KIQVMARSSP- 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l--~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~-~~~v~ar~~P- 735 (950)
|+.|+.++.++.+ ++.|+.+.++|--|..--..+-+.-|+...-..+.+.+..-+-+ ....+.| ...-+.+|.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~--G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDAD--GRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCC--ceEEEeCccCCCCCcCCCc
Confidence 6788999999999 56899999999999999999999999864322334332211000 0000000 0012445555
Q ss_pred hhHHHHHHHHhhh---CC---CEEEEEcCCccC-HHhhh--cCCcc
Q 002230 736 MDKHTLVKHLRTT---LG---EVVAVTGDGTND-APALH--EADIG 772 (950)
Q Consensus 736 ~~K~~~V~~l~~~---~g---~~v~~vGDG~ND-~~al~--~AdvG 772 (950)
.=|..+++.+++. .| +.|.++|||.|| +|+++ .+|+-
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v 194 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVV 194 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEE
Confidence 5799999888764 13 689999999999 44543 44443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.044 Score=53.97 Aligned_cols=91 Identities=18% Similarity=0.217 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +...-..++...+ +.....|+-=.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~ 125 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFL 125 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHH
Confidence 34579999999999999999999999999988887775 4321111111111 11111221112
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
.+.+.+.-. . .++++||..+|+.+-+.|+
T Consensus 126 ~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 222223222 2 6899999999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.12 Score=52.46 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 664 ~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999989999999986
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.045 Score=55.20 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=61.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh
Confidence 3578999999999999999999999988 677788888888742 111123322
Q ss_pred HHHHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 738 KHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 738 K~~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
. .+...+++. ..+.++|+||.. .|..+-+.|++-
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2 222223322 035699999998 799999999884
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.076 Score=53.83 Aligned_cols=125 Identities=19% Similarity=0.163 Sum_probs=65.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHH---------------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNIN---------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~---------------ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (950)
+.|++.++++.|+++|+++.++|.-+.. ....+..+.|+.-. .++.......-. .++.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~-~~~~---- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGV-EEFR---- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCccc-cccc----
Confidence 5789999999999999999999976631 11223333343211 000000000000 0000
Q ss_pred cccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce--eecCCCcH---HHHhcCCEEeccCChh
Q 002230 726 KIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILDDNFS 797 (950)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi--amg~~g~~---~ak~~aDivl~~~~~~ 797 (950)
.-.....|.. ..+.+.+++. | +.+.|+||..+|+.+-++|++.. ... .|.. .....+|+++.+ +.
T Consensus 100 --~~~~~~KP~p-~~~~~a~~~~-~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~--~~ 172 (176)
T TIGR00213 100 --QVCDCRKPKP-GMLLQARKEL-HIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS--LA 172 (176)
T ss_pred --CCCCCCCCCH-HHHHHHHHHc-CcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc--HH
Confidence 0001123321 1222333332 3 57889999999999999999853 332 3322 122348988843 55
Q ss_pred HH
Q 002230 798 TI 799 (950)
Q Consensus 798 ~i 799 (950)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 44
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.055 Score=53.08 Aligned_cols=97 Identities=25% Similarity=0.334 Sum_probs=59.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
++.||+.++++.|++.|+++.++|..+. ..+..+.+.+|+... ...... ....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~-~~~~---------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCP-HHPA---------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECC-CCCC----------
Confidence 4689999999999999999999998762 455667778887521 000000 0000
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.......|. ..+.+...+..| +.+.|+||...|+.+-+.+++-.
T Consensus 95 ---~~~~~~KP~--~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 ---DNCSCRKPK--PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---CCCCCCCCC--HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000001332 223333222224 56999999999999999888753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.2 Score=49.12 Aligned_cols=110 Identities=17% Similarity=0.267 Sum_probs=77.5
Q ss_pred HHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 002230 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (950)
Q Consensus 616 ~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~ 695 (950)
.+.+..+|++.+.+- + |-|++..= ....-|++++=+.+++++|+++.++|--+...+...+.
T Consensus 20 ~~~L~~~Gikgvi~D---l-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD---L-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe---c-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356778899988654 2 22333321 33567888999999999999999999999999999999
Q ss_pred HcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCc
Q 002230 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADI 771 (950)
Q Consensus 696 ~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~Adv 771 (950)
.+|+.. ++--..|..+ .+-+++++. .-+.|+|+||.. .|+-+=+.|++
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred hcCCce---------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 999974 3333455544 445555554 136899999985 47666555544
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.036 Score=54.49 Aligned_cols=93 Identities=17% Similarity=-0.007 Sum_probs=65.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
-++|||+.+.++.|+ .++++.++|.-+...+..+.+.+|+...- ..++.+++.. +..|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe-
Confidence 357999999999998 57999999999999999999999884321 2233333211 12232
Q ss_pred HHHHHHHHhhh--CCCEEEEEcCCccCHHhhhcCCccee
Q 002230 738 KHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 738 K~~~V~~l~~~--~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
+.+.++.. ..+.+.++||..+|..+-++|+|-|.
T Consensus 104 ---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 44444332 13679999999999999888866653
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.079 Score=54.90 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=59.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++-||+.++++.|++.|+++.++|+-... .....+.+|+...-+.++...+. ....|.. .
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~~-~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPDP-K 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCCH-H
Confidence 57799999999999999999999986554 46777888875322222222111 1112321 1
Q ss_pred HHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 740 TLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 740 ~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
-+.+.+++. ..+.++||||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222233322 036799999997 899998888753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.16 Score=63.76 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHH-HHCCCEEEEEcCCCHHHH
Q 002230 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC-RSAGITVRMVTGDNINTA 690 (950)
Q Consensus 612 ~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l-~~aGi~v~m~TGD~~~ta 690 (950)
+++..+.|.....|.+++-| |.|++-.....-.+-+++.+++++| ++.|+.|+++||+...+.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy----------------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY----------------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec----------------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 34455556555556665542 3444422222335667899999997 778999999999999999
Q ss_pred HHHHHH---cCCccCCc
Q 002230 691 KAIARE---CGILTDNG 704 (950)
Q Consensus 691 ~~ia~~---~gi~~~~~ 704 (950)
...-.. +++..+++
T Consensus 648 ~~~f~~~~~l~laaEHG 664 (854)
T PLN02205 648 ADWFSPCEKLGIAAEHG 664 (854)
T ss_pred HHHhCCCCCeEEEEeCC
Confidence 887754 34554444
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.16 Score=54.90 Aligned_cols=87 Identities=13% Similarity=0.180 Sum_probs=60.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
..++-||+.+.++.+++.|+++.++|+.... .+....+..|+..... -.++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------EHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------ceEEeCCC
Confidence 4557899999999999999999999998743 3445667788853110 01444433
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhh
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~ 767 (950)
...|..-.+.+.+. -.+++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 34566666666555 578999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.31 Score=52.12 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=60.7
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeeeCcccccCCHHHHhhhhccccE
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~--~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (950)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+.. ....+++..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~------------------ 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGE------------------ 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHH------------------
Confidence 444556778999999999999999999999996654444 5668889864 2222222211
Q ss_pred EeecChhhHHHHHHHHhhh--CCCEEEEEcCCccCHHhhhcCC
Q 002230 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~--~g~~v~~vGDG~ND~~al~~Ad 770 (950)
.....+.+.+++. .+..+.++||+.+|...+...+
T Consensus 79 ------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 ------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0111222222221 1467999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.16 Score=53.37 Aligned_cols=87 Identities=17% Similarity=0.136 Sum_probs=57.9
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
+-|.-|++.+.++.+++.|++|+++||+.... +..--++.|+..-..+++-+..-. +.+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~------------------~~~ 179 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS------------------NKT 179 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC------------------Cch
Confidence 44788999999999999999999999999765 334445577753222333221100 001
Q ss_pred -hhhHHHHHHHHhhhCC-CEEEEEcCCccCH
Q 002230 735 -PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (950)
Q Consensus 735 -P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~ 763 (950)
-.-|...-+.+.+. | .+++.+||-.+|.
T Consensus 180 ~~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 180 VVTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred HhHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 11266666666666 6 5889999999996
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.13 Score=54.20 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~-ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-- 736 (950)
++.||+.+.++.|++.|+++.++||-....... ..+..|+...-..++.+.+.. + .+..|.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~---------------~-~~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE---------------V-KQGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhh---------------c-cCCCCCcH
Confidence 468999999999999999999999987654332 222234432111222222000 1 111222
Q ss_pred hHHHHHHHHh---hhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 737 DKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 737 ~K~~~V~~l~---~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
-=...++.+. -. .+.++||||+..|+.+-+.|++-.
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeE
Confidence 2233334442 12 367999999999999999999853
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.14 Score=57.46 Aligned_cols=98 Identities=24% Similarity=0.227 Sum_probs=60.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 723 (950)
=++.|++.+.++.|+++|+++.++|.- ....+..+.+..|+.. ....+... .. .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~-~~--sd------ 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPH-FP--ED------ 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCC-cC--cc------
Confidence 367899999999999999999999983 2334666777777742 11111110 00 00
Q ss_pred hccccEEeecChhhHHHHHHHHhhhC---CCEEEEEcCCccCHHhhhcCCcce
Q 002230 724 IPKIQVMARSSPMDKHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~---g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
. ..+| .|. ..++..+.++. .+.+.||||+.+|..+-+.|++-.
T Consensus 99 --~--~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 --N--CSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred --c--CCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 1111 232 22333332221 267999999999999999999864
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.13 Score=51.37 Aligned_cols=98 Identities=21% Similarity=0.181 Sum_probs=60.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
++-|++.+++++|++.|+++.++|.- ....+..+.+.+|+.- ..++-+.....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~ii~~~~~~~---------- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--DDVLICPHFPD---------- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--eEEEECCCCCC----------
Confidence 45689999999999999999999974 2445677778888741 11111100000
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCccee
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGia 774 (950)
-.... ..|. ..++..+.+++| +.+.|+||+.+|+.+-+.|++-..
T Consensus 97 --~~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 --DNCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --CCCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00001 1232 233333322223 468999999999999999988643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.23 Score=49.88 Aligned_cols=92 Identities=13% Similarity=0.157 Sum_probs=57.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
+-||+.++++.|+++|+++.++|.-+. ..+..+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 448999999999999999999997543 24567778888743 22222211
Q ss_pred EEeecChhhH--HHHHHHHh--hhCCCEEEEEcCCc--------cCHHhhhcCCcce
Q 002230 729 VMARSSPMDK--HTLVKHLR--TTLGEVVAVTGDGT--------NDAPALHEADIGL 773 (950)
Q Consensus 729 v~ar~~P~~K--~~~V~~l~--~~~g~~v~~vGDG~--------ND~~al~~AdvGi 773 (950)
...+ .|... ..+.+.+. -. .+.+.||||.. +|..+-++|++-.
T Consensus 104 ~~~~-KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011 22211 22222222 11 25699999996 6999988887654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.33 Score=62.92 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=77.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeeeCcccccCCHHHHhhhhccccEEeecChhh-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~-~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~- 737 (950)
.+.||+.+.++.|+++|+++.++|+-....+..+.+..|+. ..-+.++.+++. .+..|..
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCCHH
Confidence 35799999999999999999999999999999999999985 212233333321 1223322
Q ss_pred -HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCC---cHHHHhcCCEEecc
Q 002230 738 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAG---TEVAKESADVIILD 793 (950)
Q Consensus 738 -K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g---~~~ak~~aDivl~~ 793 (950)
=....+.+.-. .+.++++||..+|+.+-+.|++- |.+. .+ .+.....+|+++.+
T Consensus 223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECC
Confidence 22333344333 36789999999999999999983 3332 22 23345678888855
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.13 Score=46.94 Aligned_cols=49 Identities=22% Similarity=0.339 Sum_probs=36.2
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia---~~~gi~~ 701 (950)
|++...+.+=|++.++|+.|+++|++++++|-....+...++ +.+|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 555567888899999999999999999999988755544444 6678764
|
... |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.88 Score=49.17 Aligned_cols=48 Identities=29% Similarity=0.400 Sum_probs=37.0
Q ss_pred eeeeccCC----CCccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCc
Q 002230 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGIL 700 (950)
Q Consensus 653 G~~~i~D~----lr~~~~~~I~~l~~aGi~v~m~TGD~~~t---a~~ia~~~gi~ 700 (950)
|.+.-.+. +-|++.++|++|+++|++++++||....+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999977665 44555667875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.37 Score=51.63 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.2
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhc-CCcceeec
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~-AdvGiamg 776 (950)
.+|...++.|+ . .+.|+++|| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 68999999998 4 577888899 8999999997 55577764
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.32 Score=51.13 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=63.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~g---i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
+-++.||+.+++++|+++|+++.++|..+......+.+..+ +..- +...+. ..+.....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd-~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFD-TTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEE-eCcccCCC
Confidence 45789999999999999999999999998877777666552 2110 000111 00111112
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
|+-=..+.+.+.-. .+.++++||...|+.+-++|++-..
T Consensus 155 p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 155 AQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 22223333333322 3679999999999999999998643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.25 Score=55.20 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++.++++++++.|++.|+++.++|.-+...+..+-+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7765310 1112224
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceee
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiam 775 (950)
..|...++.+.+..| ..++|+||...|..+.+++...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 456555555444333 6799999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.25 Score=47.16 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD-~~~ta~~ia~~~g 698 (950)
++.||+.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.13 Score=54.15 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecCh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (950)
++.||+.+.++.| ++++.++|+.....+...-+..|+...- ..++++.+. .+..| +
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~------------------~~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDI------------------QRWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhc------------------CCCCCChH
Confidence 4568999999988 5999999999988888888888886421 123332221 11122 2
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
-=....+.+.-. .+.++|+||..+|+.+-+.|++...
T Consensus 147 ~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 222333333222 2568999999999999999998764
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.15 Score=53.13 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=56.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
-++.|++.+.++.|++.|+++.++|...... ........++...-+.++...+ + ....|.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~-----------------~-~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCL-----------------E-GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeee-----------------c-CCCCCC
Confidence 3578999999999999999999999875433 2222223344221111111110 0 012333
Q ss_pred hH--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 737 DK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 737 ~K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
.. ..+.+.+.-. .+.++|+||...|+.+-++|++-
T Consensus 155 p~~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PRIYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCE
Confidence 22 2223333322 35688889999999999999884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.48 E-value=3 Score=47.04 Aligned_cols=46 Identities=22% Similarity=0.163 Sum_probs=36.6
Q ss_pred ceEEEeeeeccC--CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 002230 648 GYTCIGIVGIKD--PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (950)
Q Consensus 648 ~l~~lG~~~i~D--~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia 694 (950)
|.||+-++.-.| .+-++..++|++|. .|+.+.++||+.......+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 556665554333 47789999999999 78999999999999998874
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.27 E-value=0.69 Score=45.51 Aligned_cols=105 Identities=21% Similarity=0.246 Sum_probs=70.6
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHc---CCccCCceeeeCcc--cccCCHHHHhhhhccccE
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---REC---GILTDNGIAIEGPE--FREKSDEELSKLIPKIQV 729 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia---~~~---gi~~~~~~vi~g~~--~~~~~~~~~~~~~~~~~v 729 (950)
+|..++++.+.++.+++.|++++.+|+++.-.+...- .+. |..-+.+.++..++ +..+.. .+
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~r----------Ev 94 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHR----------EV 94 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhc----------cc
Confidence 4799999999999999999999999999965554332 222 11112223322211 111111 14
Q ss_pred EeecChhhHHHHHHHHhhh----CCCEEEEEcCCccCHHhhhcCCcc
Q 002230 730 MARSSPMDKHTLVKHLRTT----LGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~----~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+-.-+.|...++.++.. .....+..|...+|+.+-++++|-
T Consensus 95 i~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 95 ISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 5555557899999998865 235788899999999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.96 E-value=0.42 Score=49.38 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.++++.|++.|+++.++|.-+.......... .++...-+.++...+ +....|.-.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~------------------~~~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD------------------LGMRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc------------------cCCCCCCHH
Confidence 4689999999999999999999999876654433222 233221111111111 111233211
Q ss_pred --HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 739 --~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
..+++.+.-. .+.+.++||...|+.+-++|++-.
T Consensus 146 ~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 146 IYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2223333322 356899999999999999998853
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.68 E-value=0.41 Score=48.90 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=72.6
Q ss_pred CCCccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc--cccEEeecCh-
Q 002230 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSP- 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~--~~~v~ar~~P- 735 (950)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..||..--..+.+.+.--.. .-...+.| .-.-+.+|.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da--~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA--SGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC--CCcEEeecCCCCCccCcCchh
Confidence 678999999999999997 99999999998888888888875310000000000000 00000000 0012334333
Q ss_pred hhHHHHHHHHhhhC---C---CEEEEEcCCccC-HHhhhcCCcceeecCCCcHH
Q 002230 736 MDKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 736 ~~K~~~V~~l~~~~---g---~~v~~vGDG~ND-~~al~~AdvGiamg~~g~~~ 782 (950)
.=|..++..++... | +.+..+|||.|| +|+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 34666666554330 2 378999999999 67877776667776555444
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.06 E-value=1.3 Score=47.56 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=40.6
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 700 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~---~gi~ 700 (950)
|.+.-.+.+-|++.++++.|++.|++++++|+....+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555678889999999999999999999999998888777776 4764
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=90.02 E-value=0.65 Score=47.21 Aligned_cols=93 Identities=10% Similarity=0.000 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee---cChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar---~~P~ 736 (950)
++.+++.+.+++|+ .++.++|.-+...+..+.+..|+...-+.++.+++. -.+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA-----------------NPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc-----------------cCccCCCCCC
Confidence 36789999999997 479999999999999999999985422223322221 111 2342
Q ss_pred hH--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 737 DK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 737 ~K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.. ..+++.+... .+.++|+||...|+.+-+.|++..
T Consensus 144 p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 22 2333334333 356889999999999999888753
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=89.47 E-value=0.77 Score=51.11 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=38.9
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia---~~~gi~~ 701 (950)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 344445666799999999999999999999999977776666 5677753
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=88.89 E-value=0.6 Score=49.47 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=57.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++.=|++.+.++.+++.|++|+++||++.. .+..=-++.|....+.+++.+..-.. .....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------ccccc
Confidence 355678999999999999999999999754 33333455676542333332221100 00012
Q ss_pred hhHHHHHHHHhhhCC-CEEEEEcCCccCHHh
Q 002230 736 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~a 765 (950)
.-|...-+.+.+. | ++++.+||..+|..-
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3477777788777 6 688999999999765
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.81 E-value=0.91 Score=46.16 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=60.4
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHH
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (950)
-|+ .+.++.|++. +++.++||.....+..+-+..|+..--+.++.+++.. ..+..|+-=...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ----------------HHKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc----------------CCCCChHHHHHH
Confidence 344 5889999875 8999999999999999999999864322333332211 011122222233
Q ss_pred HHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 742 V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
.+.++.. .+.+.++||..+|+.+-+.|++-
T Consensus 152 ~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 3333322 24578899999999999999875
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=88.41 E-value=1.1 Score=46.10 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.+ +.+++|.-+..+....-+.+|+..-. ...+ ...+.+.... .|.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-----------------~~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-----------------PGAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-----------------CCcc-cEEEEeccCc-ccH
Confidence 46899999999999985 56667765544444455566664210 0000 0002222222 133
Q ss_pred HHHHHHhhhCC-CEEEEEcCCccCHHhhhcC--Ccce
Q 002230 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGL 773 (950)
Q Consensus 740 ~~V~~l~~~~g-~~v~~vGDG~ND~~al~~A--dvGi 773 (950)
.++....+++| +.++++||..+|+.+-++| |+-.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 44444333335 4588999999999999999 9853
|
2 hypothetical protein; Provisional |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.36 E-value=2.1 Score=42.85 Aligned_cols=84 Identities=19% Similarity=0.158 Sum_probs=62.3
Q ss_pred cCCCCccHHHHHHHHHHCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 658 KDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi--~v~m~TGD-------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
++.+.|+..+.+++|++.+. +|.++|-- +...|.++.+.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 67888999999999999987 49999986 48899999999998520
Q ss_pred EEeecChhhHHHHHHHHhhh----CCCEEEEEcCCc-cCHHhhh
Q 002230 729 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGT-NDAPALH 767 (950)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~----~g~~v~~vGDG~-ND~~al~ 767 (950)
.+....|.-..++.+.++.+ .-+.++|+||-. .|+-+=.
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN 154 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGN 154 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhh
Confidence 12335786667778877643 135699999974 3544433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.31 E-value=3.5 Score=41.91 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=42.2
Q ss_pred EEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH---HcCCc
Q 002230 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR---ECGIL 700 (950)
Q Consensus 650 ~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~---~~gi~ 700 (950)
.+-|.+.++|..-|++.+|++.|+.++.+|..+|.-..+.-+.+.+ .||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4569999999999999999999999999999998776665555554 46665
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.87 E-value=1.7 Score=45.83 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=74.2
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
..++.||+.+.+++|++.|+.+.+.|+-....+..+....|+...-+.++++.+.. -..-.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~----------------~~KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA----------------RGKPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh----------------cCCCCCHH
Confidence 34789999999999999999999999999999999999999986433344433321 11233444
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
=+...+.|.-. ...+.++.|..|.+.|-++|+.-+-
T Consensus 148 yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 148 YLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEE
Confidence 44555555434 4678888999999999999998643
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=84.62 E-value=2.2 Score=46.29 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.1
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 002230 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (950)
Q Consensus 661 lr-~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~ 712 (950)
+| |++.+++++|+++|+++.++|+-....+...-+++||...-+.++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999997543455555444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=83.90 E-value=12 Score=44.49 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=62.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhhccccEEee------c
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (950)
+++++.+ .+++.|.+ +++|+-...-++.+|++ +|+.. ++ |.+++.- .+-..-++ |
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEEC---------cCCEEeeeecCCCCC
Confidence 5666555 44567754 99999999999999987 89863 11 2111100 00001111 3
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~ 777 (950)
.-++|..-++..... .....+-||..||.|||+.|+-+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 446688777643211 1122567999999999999999999983
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=83.00 E-value=11 Score=41.29 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=35.3
Q ss_pred eeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHcCCcc
Q 002230 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIARECGILT 701 (950)
Q Consensus 654 ~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~---~ia~~~gi~~ 701 (950)
.+.-.+.+-|++.++|++|++.|++++++|+....+.. .-.+++|+..
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33445667788999999999999999999997643332 3345678754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.72 E-value=2.6 Score=41.58 Aligned_cols=86 Identities=21% Similarity=0.295 Sum_probs=58.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh-
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P- 735 (950)
+++-+++.|..-++.|=.++.+||+.. .+++.+|+...|.+.+.. .|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv-----------------------~f~Gdk~k 171 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV-----------------------IFAGDKPK 171 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce-----------------------eeccCCCC
Confidence 344568888888999999999999974 456677787887654333 3333333
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv 771 (950)
..+..-...+|++ +-.+ .-||+.||+.|-++|++
T Consensus 172 ~~qy~Kt~~i~~~-~~~I-hYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 172 PGQYTKTQWIQDK-NIRI-HYGDSDNDITAAKEAGA 205 (237)
T ss_pred cccccccHHHHhc-CceE-EecCCchhhhHHHhcCc
Confidence 1122224456655 5444 45999999999999986
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=82.70 E-value=5.8 Score=42.66 Aligned_cols=88 Identities=20% Similarity=0.289 Sum_probs=54.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
+.|.=|++.+..+.+++.|++|+++||+... |...+ ++.|......+++.+..-.. ...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~----------------~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS----------------AEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc----------------cch
Confidence 5567789999999999999999999999854 33333 34677532223332211000 000
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCH
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~ 763 (950)
..+-|...-+.+.+. | ++++.+||-.+|.
T Consensus 206 av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 112344444444445 5 6889999999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures | Back alignment and domain information |
|---|
Probab=82.53 E-value=0.098 Score=42.87 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=46.0
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcc
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQ 97 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (950)
+..|.++.++.+.+.+++..+.+++...++.+.|+.. ..+...+.+.++++||.
T Consensus 9 C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~--~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 9 CEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD--KTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT--TSCHHHHHHHHHHTTSE
T ss_pred cHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC--CCCHHHHHHHHHHhCcC
Confidence 5578889999999999999999999999999999766 44557788888888884
|
These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A .... |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.23 E-value=5 Score=42.69 Aligned_cols=92 Identities=13% Similarity=0.149 Sum_probs=55.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-+.++...+. .+..|...
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCcHHH
Confidence 4568999999999875 899999986653 2556764321122222111 12233211
Q ss_pred -HHHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCcceeec
Q 002230 739 -HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMG 776 (950)
Q Consensus 739 -~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvGiamg 776 (950)
....+.+.-. .+.++||||. ..|+.+-+.|++-....
T Consensus 169 ~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 169 YHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 1222222222 3579999999 59999999999865443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 950 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 4e-80 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-79 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-79 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-78 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-78 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-78 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-77 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 3e-73 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 5e-42 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 4e-36 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 9e-17 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 9e-17 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 6e-16 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-15 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 8e-15 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 9e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 3e-14 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-09 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 2e-05 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-04 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-04 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 950 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-171 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-170 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-43 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 9e-42 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-33 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 5e-31 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-13 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-22 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 9e-11 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 4e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 1e-05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 1e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 5e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 1e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 2e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 2e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 2e-04 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 3e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 3e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 4e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 4e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 5e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 649 bits (1676), Expect = 0.0
Identities = 243/923 (26%), Positives = 386/923 (41%), Gaps = 127/923 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V + +K TS T G+S S G N +V L ++
Sbjct: 58 VAELEQKYQTSATKGLSASLA--AELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMW 115
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
V A + L+ + + L + ++ VV VT Y Q + FK+
Sbjct: 116 VAAAICLIAFAIQASEGDLTTDDNLYLALA--LIAVVVVTGCFGYYQEFKSTNIIASFKN 173
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
L ++ V R+G + +I+ L+ GD+V + GD+VPAD + ++ SSLT
Sbjct: 174 LVPQQ----ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLT 229
Query: 291 GESEPV--NVNALNPFLL-------SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + + L T G+ + LV G RT G++ + S +
Sbjct: 230 GESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVEN 289
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
++TP+ +++ II + + F F V + G L + F
Sbjct: 290 EKTPIAIEIEHFVDIIAGLAILFGATFFIVAM---------------CIGYTFLRAMVF- 333
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ IVV VPEGL VT+ L+ K++ + +V++L A ET+GS + ICSDKTGTL
Sbjct: 334 --FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTL 391
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ-------SIFNNTGGEVV 514
T N MTV I D ++ + + L + + F + V
Sbjct: 392 TQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVP 451
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573
+ + ++G +ETA+L+F L G+ R+ V PFNS K + L +
Sbjct: 452 VPKR---IVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP 508
Query: 574 --GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
+ KGA E +L C L G+ +PL+E R L
Sbjct: 509 RDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQ 567
Query: 632 MEI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G F +A PT G + G+V + DP R V ++V CR+AGI V MVT
Sbjct: 568 LYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVT 627
Query: 684 GDNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEE 719
GD+ TAKAIA GI+++ I G + ++ E
Sbjct: 628 GDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSE 687
Query: 720 LSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
L + + V AR+SP K +V+ + LG +VAVTGDG ND+PAL +ADIG+AMGI
Sbjct: 688 LVEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 778 AGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837
AG++ AK +AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ L +
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITV 806
Query: 838 TGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISN--VMWRNILG 895
+ PL + +L++ + D +++LA E D+M P K + + N + +
Sbjct: 807 SVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQ 866
Query: 896 QSLYQ-----FLIIWYLQTRGKAVFRLDGPDPDLILN----------------------- 927
Q + G G P +
Sbjct: 867 IGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQY 926
Query: 928 ---TLIFNTFVFCQVCLSTCIRS 947
T+ F + CQ+ ++
Sbjct: 927 TCYTVFFISIEMCQIADVLIRKT 949
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 645 bits (1665), Expect = 0.0
Identities = 255/922 (27%), Positives = 394/922 (42%), Gaps = 125/922 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
++ + K T +T G++ + G N T P W+ L ++L
Sbjct: 53 LDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
+ A++ + ATE P + LG+V + VV VT Y Q + FK+
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVV--LSTVVIVTGCFSYYQEAKSSRIMDSFKN 168
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ ++ V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLT
Sbjct: 169 MVPQQ----ALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLT 224
Query: 291 GESEPV--NVNAL--NPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + NP T G+ + +V G RT G++ S
Sbjct: 225 GESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
TP+ +++ II + +F V F + + G LE + F
Sbjct: 285 GRTPIAIEIEHFIHIITGVAVFLGVSFFILSL---------------ILGYSWLEAVIF- 328
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGTL
Sbjct: 329 --LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 386
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF--NNTGGEVVIGEGN 519
T N MTV +I E D ++ ++ L + N G+ N
Sbjct: 387 TQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRA--VFQAGQDN 444
Query: 520 ----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--- 572
K + G +E+A+L+ L G Q R + + PFNS K + E
Sbjct: 445 VPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504
Query: 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACM 632
E + + KGA E IL C L NG PL E + R L
Sbjct: 505 ESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHF 563
Query: 633 EI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
+ G F AD P PT +G++ + DP R V ++V CRSAGI V MVTG
Sbjct: 564 ALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTG 623
Query: 685 DNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEEL 720
D+ TAKAIA+ GI+++ + G + ++ S E L
Sbjct: 624 DHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683
Query: 721 SKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
++ V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMGI+
Sbjct: 684 DDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
G++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ +
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN 802
Query: 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISN--VMWRNILGQ 896
PL V +L +++ D + A++LA E D+MKR P K + + N ++
Sbjct: 803 VPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQI 862
Query: 897 SLYQ-----FLIIWYLQTRGKAVFRL--------DGPDPDLILN---------------- 927
+ Q F L G L D D+ +
Sbjct: 863 GMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922
Query: 928 --TLIFNTFVFCQVCLSTCIRS 947
T F + V Q ++
Sbjct: 923 CHTSFFISIVVVQWADLIICKT 944
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 611 bits (1578), Expect = 0.0
Identities = 249/929 (26%), Positives = 393/929 (42%), Gaps = 122/929 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 10 TEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKDLDR 233
+ A +S V+ EG V ILL++ A Q +++ K+ +
Sbjct: 68 LAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQERNAENAIEALKEYEP 125
Query: 234 EKKKITVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADG--LFVSGFSVLINESSL 289
E +V R + ++I D++PGDIV + +GD+VPAD L + ++ +++S L
Sbjct: 126 E----MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 181
Query: 290 TGESEPV--NVNALNP----------FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLS 337
TGES V + + L SGT + G +V T G+ T+ GK+ ++
Sbjct: 182 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241
Query: 338 EGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397
D+TPLQ KL+ + K+ V + + + G
Sbjct: 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLI---NIGH-----FNDPVHGGSWIRGA 293
Query: 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK 457
+ +F IAV + V A+PEGLP +T LA ++M A+VR L + ET+G + ICSDK
Sbjct: 294 IYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDK 353
Query: 458 TGTLTTNHMTVLKACICEEIKEVDNSK-------------------GTPAFGSSIPASAS 498
TGTLTTN M+V K I +++ S P
Sbjct: 354 TGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG-LV 412
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE-- 556
+L N E +G TETA+ + R SK+ +
Sbjct: 413 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 472
Query: 557 --------------PFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNS 597
F+ +K M V + G ++ KGA E ++ C+
Sbjct: 473 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-V 531
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 532 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 591
Query: 650 -TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----G 704
T +G+VG+ DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 651
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAP 764
A G EF + E + + AR P K +V++L++ E+ A+TGDG NDAP
Sbjct: 652 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAP 710
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824
AL +A+IG+AMG +GT VAK ++++++ DDNFSTIV + GR++Y N+++F+++ ++ N
Sbjct: 711 ALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN 769
Query: 825 VVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884
V ++ F +A L L VQLLWVN++ D L A AL PP+ D+M R P K
Sbjct: 770 VGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPL 829
Query: 885 ISNVMWRNILGQSLYQFLI------IWYLQTRGKAVFRLDGPDPDLILN----------- 927
IS ++ + Y W++ +
Sbjct: 830 ISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDC 889
Query: 928 ---------TLIFNTFVFCQVCLSTCIRS 947
T+ + V ++C + S
Sbjct: 890 EIFEAPEPMTMALSVLVTIEMCNALNSLS 918
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 521 bits (1343), Expect = e-171
Identities = 159/839 (18%), Positives = 328/839 (39%), Gaps = 89/839 (10%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + ++L S +G++T E R +I+G NK E + + + ++
Sbjct: 19 IEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVME 74
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-FKDLDREKKKI- 238
+ A++++ + G + I+ ++ + +T + + +
Sbjct: 75 MAAIMAIALANGD-----GRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA 129
Query: 239 -TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297
+V R+G + L+PGDIV + +GD +PAD + G + +++S+LTGES PV
Sbjct: 130 PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVT 189
Query: 298 VNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI- 356
+ + SG+ + G + +V G+ T +GK A L + + Q L +
Sbjct: 190 KHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQKVLTAIGNFC 247
Query: 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 416
I I + + + + ++ + +++ +P +
Sbjct: 248 ICSIAIGMVIEIIVMYP---------------IQRRKYRDGIDN---LLVLLIGGIPIAM 289
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
P +++++A ++ A+ + + A E M +CSDKTGTLT N ++V K +
Sbjct: 290 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVF 349
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536
K V+ ++LL + ++ E + A++
Sbjct: 350 CKGVEK---------------DQVLLFAAMA-----------SRVEN-QDAIDAAMVGM- 381
Query: 537 LLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596
D + R + V PFN V K+ + G + KGA E IL
Sbjct: 382 ---LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA----- 433
Query: 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656
+ + I+K+A LR+L +A + + P + +G++
Sbjct: 434 ------KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES---PGAPWEFVGLLP 484
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA---IEGPEFR 713
+ DP R E++ + G+ V+M+TGD + K R G+ T+ + + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
+ + +LI K A P K+ +VK L+ +V +TGDG NDAPAL +ADIG+
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGI 603
Query: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833
A+ T+ A+ ++D+++ + S I++ R+++ ++ + + +++ + ++ F
Sbjct: 604 AVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT-IRIVFGFM 661
Query: 834 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 893
L +A +L + ++ D + ++ + S + + +
Sbjct: 662 LIALIWEFDFSAFMVLIIAILND-GTIMTISKDRVKPSPTPDSW--KLKEIFATGVVLGG 718
Query: 894 LG--QSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTEP 950
++ F D + L ++ L RS
Sbjct: 719 YQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSW 777
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 519 bits (1339), Expect = e-170
Identities = 172/820 (20%), Positives = 343/820 (41%), Gaps = 96/820 (11%)
Query: 126 EKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALV 185
+ L T G+++ E + +R+ YG+N+ E F + ++ A++
Sbjct: 78 DMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVMEGAAVL 134
Query: 186 SLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245
+ E W D I +LL V +++ +L ++ + V R+
Sbjct: 135 A----AGLEDWV----DFGVICGLLLLNAVVGFVQEFQAGSIVDEL-KKTLALKAVVLRD 185
Query: 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVL-INESSLTGESEPVNVNALNPF 304
G ++I +++PGDI+ + G +PADG V+ + L +++S+LTGES V+ + +
Sbjct: 186 GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ- 244
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+ + + V+ G +++T G T G+ A ++ LNG+ TI+ + +F
Sbjct: 245 VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFT 304
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
++ + + + ++ILEF + I ++ VP GLP VT ++
Sbjct: 305 LLIVWVSSF---------------YRSNPIVQILEF---TLAITIIGVPVGLPAVVTTTM 346
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484
A + KA+V+ L+A E++ +CSDKTGTLT N +++ + D
Sbjct: 347 AVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPED--- 403
Query: 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQ 544
L+L + ++ + + A L+ L +
Sbjct: 404 ---------------LMLTACLAA----------SRKKKGIDAIDKAFLKS-LKYYPRAK 437
Query: 545 AERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPL 604
+ K+++ PF+ V K++ V+E P+G KGA +L + E P+
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE-------EDHPI 490
Query: 605 NEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664
E + +FA+ R+L +A + +GI+ DP R
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSW-----------EILGIMPCMDPPRHD 539
Query: 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSK 722
++V ++ G++++M+TGD + A+ +R+ G+ T+ N + + E+
Sbjct: 540 TYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYD 599
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782
+ A P K+ +V+ L+ G +VA+TGDG NDAP+L +AD G+A+ ++
Sbjct: 600 FVEAADGFAEVFPQHKYNVVEILQ-QRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDA 657
Query: 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAP 842
A+ +AD++ L I+ K R ++ + +V +++ ++ + L + N
Sbjct: 658 ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS-IHLEIFLGLWIAILNRS 716
Query: 843 LTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFL 902
L ++++ + D + LA+A + + + +LG L
Sbjct: 717 LNIELVVFIAIFAD-VATLAIAYDNAPYSQTPVKW---NLPKLWGMSV--LLGVVLAVGT 770
Query: 903 IIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLS 942
I G + ++ N + +F Q+ L+
Sbjct: 771 WITV------TTMYAQGENGGIVQNFGNMDEVLFLQISLT 804
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 5e-43
Identities = 137/587 (23%), Positives = 221/587 (37%), Gaps = 152/587 (25%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 134 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPVLK 192
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 193 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI--AVTIVVVAVPEGL 416
L A+ F W + L FA + ++VVA P
Sbjct: 252 PTVLLVAISAFIY---------------WYFIAHAPLL----FAFTTLIAVLVVACPCAF 292
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
LA +L M K L+++ A E T++ DKTGTLT
Sbjct: 293 GLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT-------------- 338
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT---------- 526
KG P +P G++ E+L
Sbjct: 339 -------KGKPEVTDLVPL---------------------NGDERELLRLAAIAERRSEH 370
Query: 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEI 586
P AI++ +A ++ + E + + GVV A I
Sbjct: 371 PIAEAIVK---------KALEHGIELGEPEKVEVIAGE-GVV--------------ADGI 406
Query: 587 ILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT 646
++ + + G V N + +EK EA + +A
Sbjct: 407 LVGN-KRLMEDFGVAVS------NEVELALEKLEREAKTAVIVA---RNGRV-------- 448
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 449 -----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------- 496
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
D V+A P K VK L+ EVVA GDG NDAPAL
Sbjct: 497 ----------DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPAL 534
Query: 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
+AD+G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 535 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 9e-42
Identities = 129/590 (21%), Positives = 220/590 (37%), Gaps = 159/590 (26%)
Query: 242 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 301
+ +G ++S+ ++ GD++ + G+++P DG G S ++ES +TGE PV A
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPVAKEAS 288
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
++ T Q GS M VG T +++ +S+ P+Q +A +
Sbjct: 289 AK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQ----RLADTVSGW- 342
Query: 362 LFF-------AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF-FAIAVTIVVVAVP 413
F AV++F V W G L + AV+++++A P
Sbjct: 343 --FVPAVILVAVLSFIV---------------WALLGPQP--ALSYGLIAAVSVLIIACP 383
Query: 414 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 473
L LA +S+ + K L+++ A E M ++ DKTGTLT
Sbjct: 384 CALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT----------- 432
Query: 474 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT------- 526
+G P +V + + L
Sbjct: 433 ----------EGHPKLT---------------------RIVTDDFVEDNALALAAALEHQ 461
Query: 527 ---PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583
P AI+ A+ + + VE F + G V +
Sbjct: 462 SEHPLANAIVHA---------AKEKGLSLGSVEAFEAPT------------GKGVVGQVD 500
Query: 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 643
+ + + +G L E ++ + + +A + +
Sbjct: 501 GHHVAIGNARLMQEHG-------GDNAPLFEKADELRGKGASVMFMA---VDGKT----- 545
Query: 644 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703
+ ++ ++DP++ E++ + +GI + M+TGD+ TA+A+A GI
Sbjct: 546 --------VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI---- 593
Query: 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
+ V+A P DK +V L+ G +VA+ GDG NDA
Sbjct: 594 -------------KK----------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDA 629
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
PAL +ADIG+AMG GT+VA ESA V +L + I + S NI
Sbjct: 630 PALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-33
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
I I D RP +K+ + ++ G+ + +++GD + K +++E I
Sbjct: 128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------------ 175
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
E + SP DK +++ L+ G V + GDG NDA AL AD+
Sbjct: 176 -----QE----------YYSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADV 219
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
+AMG G +++K AD+I++ ++ T++ + K + + I
Sbjct: 220 SVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-32
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D +RP +E+++ ++ GI M+TGDN AK +A E G+
Sbjct: 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------ 183
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ A P +K VK ++ V A+ GDG NDAPAL +AD+
Sbjct: 184 -----DD----------YFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADV 226
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G AGT+VA E+AD++++ ++ + + + R Y
Sbjct: 227 GIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 5e-31
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 202
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 203 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 245
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 246 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 7e-29
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 527 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 574
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 575 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 617
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 618 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-13
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 19/230 (8%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 212 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 270
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 271 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
L A+ F W + L F + ++VVA P L
Sbjct: 330 PTVLLVAISAFIY---------------WYFIAHAPLL--FAFTTLIAVLVVACPCAFGL 372
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A +L M K L+++ A E T++ DKTGTLT V
Sbjct: 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 422
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-22
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCK 581
L +TA+LE + A AS+ K++ PF+ +++M VV+ ++ CK
Sbjct: 32 LKNLLDTAVLEGT----DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCK 87
Query: 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD 641
GA + IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 88 GALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY 146
Query: 642 APIPTEGYTCIGIVGIKDP 660
G + D
Sbjct: 147 QRADESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 59.0 bits (144), Expect = 9e-11
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 13 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 71
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRT 327
+ + + T G K+ T VG T
Sbjct: 72 SKGDE-VFGATINNTGVLKIRATRVGGET 99
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 4e-09
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 11/144 (7%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKS 716
+R G +E VA I +++G + N + +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+ K +++ L ++ + GD D A +D+ A
Sbjct: 137 PH------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVTDVEAAKLSDLCFARD 189
Query: 777 IAGTEVAKESADVIILDDNFSTIV 800
E +++ + + D F I
Sbjct: 190 YLLNECREQNLNHLPYQD-FYEIR 212
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 68/456 (14%), Positives = 128/456 (28%), Gaps = 161/456 (35%)
Query: 501 LLQSIFNNTGGEVVIGEGNKTEILGTPT--ETAILEFGLLLGGDFQAERQASKIVK--VE 556
+ +SI + E+ I+ + + F LL + ++V+ VE
Sbjct: 41 MPKSILSKE--EI-------DHIIMSKDAVSGTLRLFWTLL-------SKQEEMVQKFVE 84
Query: 557 PFNSVKKQMGVVIELPEGGFRVHCKGAS---EIILAACDKFLNSNGEVVPLNEAAVNHLN 613
++ ++ + + S + + D+ N N N V+ L
Sbjct: 85 --EVLRINYKFLMS----PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN---VSRL- 134
Query: 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV-KESVAI- 671
+ K +AL L P + + I G + G K VA+
Sbjct: 135 QPYLKL-RQALLEL----------------RPAKN---VLIDG----V-LGSGKTWVALD 169
Query: 672 -CRSAGITVRM------VTGDNINTAKAIARE----CGILTDNGIA----IEGPEFR-EK 715
C S + +M + N N+ + + + N + + R
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 716 SDEELSKLIP---------------------------KIQVMAR-SSPMD-------KHT 740
EL +L+ KI + R D H
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 741 LVKHLRTTLGE-----VVA-VTGDGTNDAPALHEADIG--LAMGIAGTEVAKESADVIIL 792
+ H TL ++ D P E + I +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLP--REVLTTNPRRLSIIAES----------I 337
Query: 793 DDNFSTIVTVAKWGRSVYINIQKFVQ-FQLTVNV----------VALIVNF-SSACLTGN 840
D +T W ++N K + ++NV L V F SA +
Sbjct: 338 RDGLAT------WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSA----H 386
Query: 841 APLTAVQLLWVNM-------IMDTLGALALATEPPN 869
P + L+W ++ +++ L +L + P
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 9e-07
Identities = 72/488 (14%), Positives = 136/488 (27%), Gaps = 169/488 (34%)
Query: 211 LLVVFVTATSDYKQSLQFKDL---------DREKKKITVQVAR-NGFRRKISIYDLL--- 257
+L VF + + KD+ E I + +G R ++ L
Sbjct: 21 ILSVFE---DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR---LFWTLLSK 74
Query: 258 PGDIVHLCMGDQVPAD-GLFVSGFSVLINESSLTGES---------------EPVNVNAL 301
++V + + + + +S + S+ NV+ L
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 302 NPFLLSGTKVQNGSCKM----LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATII 357
P+L K++ ++ V G+ G
Sbjct: 135 QPYL----KLRQALLELRPAKNVLIDGV-------------LG----------------S 161
Query: 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSG-----DDALEILEFFAIAVTIVVVAV 412
GK V V + K+ W + LE+L+ + +
Sbjct: 162 GK-----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 413 PEG---LPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469
+ + L + S+ +++++ K L L VL
Sbjct: 217 SDHSSNIKLRIH-SIQAELRRLLKSKPYENCL-------------------L------VL 250
Query: 470 KACICEEIKEVDNSKGTPAFGSSIPASASKLLL----QSIFN----NTGGEVVIGEGNKT 521
V N+K AF S K+LL + + + T + + + T
Sbjct: 251 L--------NVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 522 EILGTPTETAILEFGLLLGGDFQAE-RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580
TP E L L Q R+ P ++ ++ E R
Sbjct: 298 L---TPDEVKSL-LLKYLDCRPQDLPREVLTT---NPR-----RLSIIAES----IRDG- 340
Query: 581 KGASEIILAACDKFLNSNGE-VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS 639
LA D + + N + + + E+++N L + + L + F
Sbjct: 341 -------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYR---KMFDRLSV--------FP 382
Query: 640 ADAPIPTE 647
A IPT
Sbjct: 383 PSAHIPTI 390
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 2e-05
Identities = 45/295 (15%), Positives = 81/295 (27%), Gaps = 98/295 (33%)
Query: 11 DVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSN---QEKFRVAV 66
++K N+ E L+ +KL N R ++N+ R + + + +
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 67 LVSQAALQFIHGL-NLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIA 125
LV L N+ + + A C K L
Sbjct: 248 LV----------LLNVQN----AKAWNAFNLS-C-------------KIL---------- 269
Query: 126 EKLST---SITDGISTSEHLLNRRKEIYGINK---FTESPARG-FWVYVWEALHDM---- 174
L+T +TD +S I + T + Y+ D+
Sbjct: 270 --LTTRFKQVTDFLSA-----ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322
Query: 175 ---TLMILAVCALVSLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKD 230
L++ A S+ G+AT + W D L ++ L V ++Y++ F
Sbjct: 323 LTTNPRRLSIIAE-SIRDGLATWDNWKHVNCDKLTTIIESSLNVL--EPAEYRK--MFDR 377
Query: 231 LD--REKKKITVQV--------------------------ARNGFRRKISIYDLL 257
L I + + ISI +
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 3e-05
Identities = 55/411 (13%), Positives = 110/411 (26%), Gaps = 136/411 (33%)
Query: 45 LSKRFEAEAIRRSNQEKFRVAVLV-------SQAALQFIHGLNLSSEYTVPEEVAASGFQ 97
LSK E + I S L + +F+ + L Y + S +
Sbjct: 46 LSKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV-LRINY----KFLMSPIK 99
Query: 98 ICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTE 157
+ + + ++ +++ + A K + +S + L R+ + +
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYN------VSRLQPYLKLRQALLEL----- 147
Query: 158 SPARGFWVYVWEALHDM-----TLMILAVCALVSLVVGIATEG---WPK-GAHDGLGIVM 208
PA+ V + + T + L VC S V + W + V+
Sbjct: 148 RPAK----NV--LIDGVLGSGKTWVALDVCL--SYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKK-KITVQVARNGFRRKISIYDLLPGDIVHLCMG 267
+L + ++ D K+ + + RR +
Sbjct: 200 EMLQKLLYQIDPNWTSRS-----DHSSNIKLRIHSIQAELRRLLK--------------- 239
Query: 268 DQVPADGLFVSGFSVLINESSLTGESEPV-NVNALNPFLLSGTKVQNGSCKMLVTTVGMR 326
+ + L V L+N V N A N F N SCK+L+TT R
Sbjct: 240 SKPYENCLLV-----LLN----------VQNAKAWNAF--------NLSCKILLTT---R 273
Query: 327 TQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386
+ V + T
Sbjct: 274 FK-----------------------QVTDFLSAAT---TTHISLDHHSMTLTPD------ 301
Query: 387 WTWSGDDALEILEFFAIAVTIVVVAVPE----GLPLAVTLSLAFAMKKMMN 433
E+ + +P P +++ +A +++ +
Sbjct: 302 ---------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLA 342
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 3e-05
Identities = 86/645 (13%), Positives = 174/645 (26%), Gaps = 202/645 (31%)
Query: 6 NENFSDVKAKNTSEEALQR--WRKLCGFVKNRKRRFRFTANLSKRFE--AEAIRRSNQEK 61
E + + R W L + ++F L ++ I+ ++
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFW-TLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQP 105
Query: 62 FRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG-- 119
+ + + + + + ++Y V + EL K + + G
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL------RPAKNVLIDGVL 159
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
G G K T + + L+ + + K + FW+ + T++ +
Sbjct: 160 GS-G---K--TWVA-----LDVCLSYKVQ----CKM---DFKIFWLNLKNCNSPETVLEM 201
Query: 180 AVCALVSLVVGIATEGWPKGAH--------DGLGIVMSILLVVFVTATSDYKQSLQFKDL 231
L L+ I + H + + LL + Y+ L L
Sbjct: 202 ----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL-----KSKPYENCLL--VL 250
Query: 232 D--REKKKITVQVARNGF----R-----RKISIYDLLPGDIV-HLCMGDQVP------AD 273
+ K N F + R + D L H+ +
Sbjct: 251 LNVQNAKAW------NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 274 GLFVSGFSVLINESSLTGESEPVNVNALNPFLLS--GTKVQNGSCKMLVTTVGMRTQWGK 331
L + + L P V NP LS +++G W
Sbjct: 305 SLLLK--YLDCRPQDL-----PREVLTTNPRRLSIIAESIRDGLA--------TWDNW-- 347
Query: 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKL---QEGTHWT 388
V + + TII V+ A + +F +L H
Sbjct: 348 --------------KHVNCDKLTTIIES---SLNVLEPAEY-RKMF-DRLSVFPPSAHIP 388
Query: 389 -------WSG---DDALEILEFFAIAVTIVVVAVPEGL------PLAVTL-SLAFAMK-K 430
W D + ++ L +++ S+ +K K
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKL----------HKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 431 MMNDKALVRHLAACETMGSATSICSDKTGTLTTN---------HMTVLKACICEEIKEVD 481
+ N+ AL H + + + SD + H+ K ++
Sbjct: 439 LENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL-----------KNIE 485
Query: 482 NSKGTPAF-----------------GSSIPASASKL-LLQS-------IFNNTGG-EVVI 515
+ + F ++ AS S L LQ I +N E ++
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 516 GE------GNKTEILGTPTETAILEFGLLLGGDF---QAERQASK 551
+ ++ + T +L L+ + +A +Q +
Sbjct: 546 NAILDFLPKIEENLICSK-YTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 3e-07
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 249 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308
++ + + GDI+ + G + P DG + G S +++ES +TGE+ PV G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAKKP-------G 86
Query: 309 TKV------QNGSCKMLVTTVGMRT 327
+ V QNGS + T VG T
Sbjct: 87 STVIAGSINQNGSLLICATHVGADT 111
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 19/145 (13%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+ G E V+ + V +G + D + ++
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNT----LIVENDA 128
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA 774
L+ + + K ++ L+ L + V GDG ND A I +A
Sbjct: 129 LNGLVTGHMMFSHS-----KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKHAHIKIA 182
Query: 775 MGIAGTEVAKESADVIILDDNFSTI 799
EV K+ A I + + + I
Sbjct: 183 FN--AKEVLKQHATHCINEPDLALI 205
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEF-------- 712
VK A C G+ V NI+ + L N I E
Sbjct: 90 VKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQ 149
Query: 713 -----REKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVA 754
E+ ++E+ IP ++ R P K +++H L E ++
Sbjct: 150 MTPFITEEEEKEVLPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMS 208
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
GDG ND L A IG+AMG A +V K +AD +
Sbjct: 209 F-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 25/148 (16%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
+ PG+ + + ++ G +++G + + + D + E D
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNT----VEIRDNV 232
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADI 771
L+ + I M+ + L ++A GDG ND P L A
Sbjct: 233 LTDNITLPI--------MNAANKKQTLVDLAARLNIATENIIAC-GDGANDLPMLEHAGT 283
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTI 799
G+A V +E I F +
Sbjct: 284 GIAWK--AKPVVREKIHHQINYHGFELL 309
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 714 EKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVAVTGDGT 760
+ +E + P+ + + R + K +++ L +V A GDG
Sbjct: 152 AEEEEPYVRNYPEFRFV-RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAF-GDGL 209
Query: 761 NDAPALHEADIGLAMGIAGTEVAKESADVI 790
ND L G+AMG A EV K AD +
Sbjct: 210 NDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 33/156 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPE---------- 711
++S+ + R V + + + + + GI+ + E
Sbjct: 97 FRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQ 156
Query: 712 ----FREKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVA 754
F E++++++ L+ + R P+ K T + R + E++A
Sbjct: 157 LCFYFDEEAEQKVMPLLSGLSAT-RWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMA 215
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
GDG ND P L A IG+AMG A +V + AD +
Sbjct: 216 C-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 27/149 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
P+ P + E VA + G V + +G + + + + D N + I
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTLEIV------- 228
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
+L+ +++ ++ V A++ K ++ L VAV GDG ND + A
Sbjct: 229 -SGKLTGQVLGEV-VSAQT----KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAG 281
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTI 799
+G+A + A + +
Sbjct: 282 LGVAYH--AKPKVEAKAQTAVRFAGLGGV 308
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 5e-05
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 27/149 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
G +E++ ++ G V +V+G I + G+ D N + ++
Sbjct: 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRLIVK------- 126
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
D +L+ + ++ + + K +++ + G + VAV GDG ND +A
Sbjct: 127 -DGKLTGDVEGEV-LKENA----KGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAG 179
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTI 799
+ +A + KE AD+ I + I
Sbjct: 180 LKIAFC--AKPILKEKADICIEKRDLREI 206
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PG++E V+ + + V +++G + + +A + I N A +F + E +
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFYF--NGEYAG 145
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEADIGLAM-GIAG 779
K ++K L+ +++ + GDG D A AD + G
Sbjct: 146 FDETQPTAESGG---KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVI 201
Query: 780 TEVAKESADVIILD 793
+ K++A I D
Sbjct: 202 RQQVKDNAKWYITD 215
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSD 717
+ PG + ++ R G +V+G + +A E + N + I D
Sbjct: 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV--------D 307
Query: 718 EELS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEA 769
L+ +++ I +D+ LR + + VAV GDG ND L A
Sbjct: 308 GTLTGRVVGPI--------IDRAGKATALREFAQRAGVPMAQTVAV-GDGANDIDMLAAA 358
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTI 799
+G+A +E AD + T+
Sbjct: 359 GLGIAF--NAKPALREVADASLSHPYLDTV 386
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 15/91 (16%)
Query: 718 EELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTGDGTNDAP 764
+ + K + S DK V L+ E++ + GD ND P
Sbjct: 125 DYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNNDMP 183
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDN 795
A T+ K +D +
Sbjct: 184 MFQLPVRKACPANA-TDNIKAVSDFVSDYSY 213
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 23/140 (16%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
G+KE V ++ G + + +G + + A I +N A+ E SD +
Sbjct: 85 DGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV---ETIWNSDGSFKE 141
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIA 778
L + + G EV+A+ GDG D E IA
Sbjct: 142 LDNSNGA--------CDSKLSAFDKAKGLIDGEVIAI-GDGYTDYQLY-EKGYATK-FIA 190
Query: 779 GTEV-----AKESADVIILD 793
E + + +
Sbjct: 191 YMEHIEREKVINLSKYVARN 210
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 2e-04
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 713 REKSDEELSKLIPKI--QVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTG 757
+ E + ++I ++ ++A S +K + ++ LG EV V G
Sbjct: 118 ETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-G 176
Query: 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
DG ND A +A+ A + KE+AD + +
Sbjct: 177 DGENDLDAFKVVGYKVAVAQAPKIL-KENADYVTKKEY 213
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 751
+ I+ PE ++ E LS+ + + +S P + K L + + E
Sbjct: 149 LLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEE 208
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
+V GD ND EA + +AM A +V KE++D++ L +N
Sbjct: 209 IVVF-GDNENDLFMFEEAGLRVAMENAIEKV-KEASDIVTLTNN 250
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Length = 26 | Back alignment and structure |
|---|
Score = 38.2 bits (88), Expect = 3e-04
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 21 ALQRWRKLCGFVKNRKRRFRFTANL 45
A QRWR VKNR RRFR +NL
Sbjct: 1 ARQRWRSSVSIVKNRARRFRMISNL 25
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--------LTDNGIAIEGPEFRE 714
G E V R V +++ ++ + R+ G D+ + G + R+
Sbjct: 72 EGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ 130
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
K K V ++ V+A GD ND L EA G+
Sbjct: 131 KDP--------------------KRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 22/99 (22%)
Query: 717 DEELSKLIPKIQ-------VMARSSPM---------DKHTLVKHLRTTLG----EVVAVT 756
E +I ++ + + DK+T + +L +V+ V
Sbjct: 188 PSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVV- 246
Query: 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
GD ND L A+ A K A ++ +
Sbjct: 247 GDAENDIAMLSNFKYSFAVANATDSA-KSHAKCVLPVSH 284
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 751
+ + E ++K P + V+ R + + K + L ++ +
Sbjct: 162 EVYTEHDIQHDITETITKAFPAVDVI-RVNDEKLNIVPKGVSKEAGLALVASELGLSMDD 220
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793
VVA+ G +D P + A +G+AMG A E+ K AD +
Sbjct: 221 VVAI-GHQYDDLPMIELAGLGVAMGNAVPEI-KRKADWVTRS 260
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 5e-04
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSPM---------DK----HTLVKHLRTTLGE 751
+ ++ P+ E+ + + + +S+P K LV L T +
Sbjct: 156 MFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADD 215
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
V+ + GD ND + A +G+AMG A EV KE+A + L +
Sbjct: 216 VMTL-GDQGNDLTMIKYAGLGVAMGNAIDEV-KEAAQAVTLTNA 257
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 950 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.91 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.91 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.9 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.84 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.46 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 99.41 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.29 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.25 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.19 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.16 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.13 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.11 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.09 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.07 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.02 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.98 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.94 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.88 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.87 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.87 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.86 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.83 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.83 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.79 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.78 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.77 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.75 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.75 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.73 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.69 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.65 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.63 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.62 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.61 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.56 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.53 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.52 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.5 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.46 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.45 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.44 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.44 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.42 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.41 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.39 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.35 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.34 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.34 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.33 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.29 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.27 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.26 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.25 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.23 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.23 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.22 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.19 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.17 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.14 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.14 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.14 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.13 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.11 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.11 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.1 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.1 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 98.09 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.08 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.08 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.08 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.07 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.05 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.04 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.03 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.0 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.99 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.99 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.93 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.92 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.91 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.91 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.91 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.9 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.86 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.84 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.8 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.8 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.77 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.77 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.75 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.74 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.74 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.73 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.71 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.71 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.63 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.62 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.6 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.57 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.52 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.48 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.39 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.32 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.27 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.26 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.22 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.07 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.05 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.03 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.97 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.91 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.91 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.9 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.88 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.79 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.79 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.75 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.65 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.64 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.62 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.61 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.58 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.49 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.43 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.33 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.12 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.03 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.02 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.69 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.25 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.19 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.15 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.01 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.89 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.64 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.48 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 93.02 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 91.44 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 89.6 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 88.41 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 87.05 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 86.27 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 85.37 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 85.19 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.43 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 82.88 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 82.79 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 82.77 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-128 Score=1221.41 Aligned_cols=809 Identities=28% Similarity=0.388 Sum_probs=681.9
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc---
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~--- 193 (950)
+...++++++.|++++..||++++ +.+|+++||+|++++++.+++|+.+++||+++++++++++++++++.+...
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred hhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhcc
Confidence 345799999999999999999988 999999999999999999999999999999999999999999988765321
Q ss_pred cCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeec
Q 002230 194 EGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP 271 (950)
Q Consensus 194 ~~~--~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vP 271 (950)
.++ ...|++++.+++.+++..++..+++++.++..+++.+ ..+.+++|+|||++++|+++||||||||.|++||+||
T Consensus 132 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~-l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VP 210 (1034)
T 3ixz_A 132 GDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKN-LVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVP 210 (1034)
T ss_pred CCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceec
Confidence 111 1245666554444444444444444444444444444 3456899999999999999999999999999999999
Q ss_pred ccEEEEeecceEEEcccccCCCCcccccCC---------CCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCC
Q 002230 272 ADGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (950)
Q Consensus 272 aDgill~g~~l~VDeS~LTGEs~pv~k~~~---------~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~ 342 (950)
|||+|++|+++.||||+|||||.|+.|..+ .+++|+||.+.+|.++++|++||.+|++|+|++++.+.+.+
T Consensus 211 AD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~ 290 (1034)
T 3ixz_A 211 ADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE 290 (1034)
T ss_pred CCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccC
Confidence 999999999899999999999999999642 35689999999999999999999999999999999998999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHH
Q 002230 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (950)
Q Consensus 343 ~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l 422 (950)
+||+|+++++++.++..+++++++++|++++.. + ..+...+..++++++++||||||+++|+
T Consensus 291 ~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~i~l~v~~iPe~Lp~~vti 352 (1034)
T 3ixz_A 291 KTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------G----------YTFLRAMVFFMAIVVAYVPEGLLATVTV 352 (1034)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c----------chHHHHHHHHHHHHHheeccccHHHHHH
Confidence 999999999999999888888877777665321 0 0456788899999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHH
Q 002230 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (950)
Q Consensus 423 ~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (950)
++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+..............+....+.
T Consensus 353 ~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (1034)
T 3ixz_A 353 CLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALC 432 (1034)
T ss_pred HHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987765433221111111111223344556
Q ss_pred HHHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCC---Cc
Q 002230 503 QSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE---GG 575 (950)
Q Consensus 503 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~---~~ 575 (950)
..+.+|+++....+++. .....|+|+|.|+++++...+.+....+..+++++.+||+|+||+|++++...+ ++
T Consensus 433 ~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~ 512 (1034)
T 3ixz_A 433 RVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512 (1034)
T ss_pred HHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCcc
Confidence 66777777665443322 345689999999999999888888888889999999999999999988877543 67
Q ss_pred EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCC--------CCCCCCCC
Q 002230 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTE 647 (950)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~--------~~~~~~e~ 647 (950)
+.+++|||||.|+++|+.+. .+|...+++++.++.+.+.+++|+.+|+||+++|||.++.+.. +..+..|+
T Consensus 513 ~~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~ 591 (1034)
T 3ixz_A 513 HVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTS 591 (1034)
T ss_pred EEEEEeCChHHHHHHhHHhh-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhcccc
Confidence 89999999999999999876 4677889999999999999999999999999999999875421 11234588
Q ss_pred ceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------
Q 002230 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------- 704 (950)
Q Consensus 648 ~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------------------- 704 (950)
|++|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|+++||..++.
T Consensus 592 ~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 671 (1034)
T 3ixz_A 592 GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDAR 671 (1034)
T ss_pred CcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccc
Confidence 999999999999999999999999999999999999999999999999999975432
Q ss_pred -eeeeCcccccCCHHHHhhhhccc--cEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcH
Q 002230 705 -IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (950)
Q Consensus 705 -~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~ 781 (950)
.+++|.++..++++++.+.+.+. .+|+|++|+||.++|+.+|+. |++|+|+|||.||+|||++||+|||||++|++
T Consensus 672 ~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d 750 (1034)
T 3ixz_A 672 ACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750 (1034)
T ss_pred eeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEEeCCccCH
Confidence 47889999999999988887655 499999999999999999998 99999999999999999999999999999999
Q ss_pred HHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHH
Q 002230 782 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGAL 861 (950)
Q Consensus 782 ~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~l 861 (950)
++|++||+|+.++||.+|+.++++||++|+||+|+++|++++|+..+++.+++.+++.+.||+++|+||+|+++|++|++
T Consensus 751 ~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~pal 830 (1034)
T 3ixz_A 751 AAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSV 830 (1034)
T ss_pred HHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred HhccCCCCccccccCCCCC-CCCCcCHHHHHHHHHH-HHHHHHHHHHHHHhcc--------cccccCC----C---C---
Q 002230 862 ALATEPPNGDLMKRSPVGR-KGNFISNVMWRNILGQ-SLYQFLIIWYLQTRGK--------AVFRLDG----P---D--- 921 (950)
Q Consensus 862 al~~e~p~~~l~~~~P~~~-~~~li~~~~~~~i~~~-~~~~~~~~~~l~~~~~--------~~~~~~~----~---~--- 921 (950)
+|++|||++++|+|||+++ +++++++.++..++++ ++++++..++.+|... .++++.. . +
T Consensus 831 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 910 (1034)
T 3ixz_A 831 SLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQD 910 (1034)
T ss_pred HhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccccccc
Confidence 9999999999999999987 6899999987765544 6666655554443211 1111110 0 0
Q ss_pred -------------cccccchHHhHHHHHHHHHHHHhcccC
Q 002230 922 -------------PDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 922 -------------~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
.....+|++|++||++|+||.||||+.
T Consensus 911 ~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~ 950 (1034)
T 3ixz_A 911 SYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR 950 (1034)
T ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccC
Confidence 001268999999999999999999974
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-127 Score=1214.71 Aligned_cols=808 Identities=29% Similarity=0.400 Sum_probs=680.6
Q ss_pred hcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc-cCC
Q 002230 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT-EGW 196 (950)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~-~~~ 196 (950)
..+++++++.|++++..||++++ +.+|+++||+|+++.++.+|+|+.++++|+++++++|++++++|++++... ...
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 35789999999999999999977 999999999999999989999999999999999999999999998875432 001
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH----HhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecc
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFK----DLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~----~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPa 272 (950)
...|.+.....++++++++++++.++.|+++.+ +|.+ ..+.+++|+|||++++|+++||||||||.|++||+|||
T Consensus 128 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 128 DEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 111222233333455566667777777765433 3332 34678999999999999999999999999999999999
Q ss_pred cEEEEeecceEEEcccccCCCCcccccCCC---------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCC
Q 002230 273 DGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (950)
Q Consensus 273 Dgill~g~~l~VDeS~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (950)
||+|++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|+|++++.+++.++
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 286 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGR 286 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCC
T ss_pred eEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCC
Confidence 999999988999999999999999997543 47999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 002230 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (950)
Q Consensus 344 tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~ 423 (950)
+|+|+.+++++.++..++++++++++++++. . +. .+...+..++++++++||||||++++++
T Consensus 287 t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~~~~~i~llv~~iP~~Lp~~vti~ 348 (1028)
T 2zxe_A 287 TPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEAVIFLIGIIVANVPEGLLATVTVC 348 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHHHHHHHHHHHHHSCTTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c-----cC----------cHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 9999999999999999988888877766421 1 00 2445677888999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHH
Q 002230 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (950)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (950)
+++++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+.............++..+.+..
T Consensus 349 l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 428 (1028)
T 2zxe_A 349 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSR 428 (1028)
T ss_dssp HHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHH
T ss_pred HHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877654322111000000111233444556
Q ss_pred HHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcC---CCcE
Q 002230 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGF 576 (950)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~---~~~~ 576 (950)
..++|+++.++.+..+ .....|||+|.|+++++.+.+.+....+..+++++.+||+|+||||+++++.+ ++++
T Consensus 429 ~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~ 508 (1028)
T 2zxe_A 429 IAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRY 508 (1028)
T ss_dssp HHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCE
T ss_pred HHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcE
Confidence 6777877665432221 33568999999999999887667777778899999999999999999999864 4678
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCC--------CCCCCCCCc
Q 002230 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTEG 648 (950)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~--------~~~~~~e~~ 648 (950)
.+++|||||.|+++|+++. .+|...+++++.++.+.+.+++|+++|+||+++|||+++.+.. +..+..|+|
T Consensus 509 ~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~ 587 (1028)
T 2zxe_A 509 LLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTD 587 (1028)
T ss_dssp EEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSS
T ss_pred EEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcC
Confidence 9999999999999999764 5778889999999999999999999999999999999865311 112345789
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------c
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------G 704 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~------------------------~ 704 (950)
++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|++|||..++ .
T Consensus 588 l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 667 (1028)
T 2zxe_A 588 LCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKA 667 (1028)
T ss_dssp EEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCE
T ss_pred eEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccce
Confidence 9999999999999999999999999999999999999999999999999998542 3
Q ss_pred eeeeCcccccCCHHHHhhhhcccc--EEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 705 IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 705 ~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
.+++|+++..+.++++++++.++. +|||++|+||..+|+.+|+. |++|+|+|||.||+|||++||||||||++|+++
T Consensus 668 ~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ 746 (1028)
T 2zxe_A 668 CVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSDV 746 (1028)
T ss_dssp EEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH
T ss_pred EEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEeCCccCHH
Confidence 578999999999999988887764 99999999999999999998 999999999999999999999999999889999
Q ss_pred HHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHH
Q 002230 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA 862 (950)
Q Consensus 783 ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la 862 (950)
+|++||+++++|+|.+|++++++||++|+||++++.|++++|+..++..+++.++..+.|++++|++|+|+++|++|+++
T Consensus 747 ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~a 826 (1028)
T 2zxe_A 747 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAIS 826 (1028)
T ss_dssp HHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHH
T ss_pred HHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888888899999999999999999999999
Q ss_pred hccCCCCccccccCCCCCCC-CCcCHHHHHH-HHHHHHHHHHHHHHHHHh-----cc---c-------ccccCCC-----
Q 002230 863 LATEPPNGDLMKRSPVGRKG-NFISNVMWRN-ILGQSLYQFLIIWYLQTR-----GK---A-------VFRLDGP----- 920 (950)
Q Consensus 863 l~~e~p~~~l~~~~P~~~~~-~li~~~~~~~-i~~~~~~~~~~~~~l~~~-----~~---~-------~~~~~~~----- 920 (950)
|++|||++++|+|||++++. +++++.++.. ++..+++++++.|+.++. |. . ++.....
T Consensus 827 l~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 906 (1028)
T 2zxe_A 827 LAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDS 906 (1028)
T ss_dssp GGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECT
T ss_pred hccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccc
Confidence 99999999999999997666 9999998776 445678887766654432 21 0 1110000
Q ss_pred -Cc----------ccccchHHhHHHHHHHHHHHHhcccC
Q 002230 921 -DP----------DLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 921 -~~----------~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
.. ....+|++|++||++|+||.||||+.
T Consensus 907 ~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~ 945 (1028)
T 2zxe_A 907 FGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR 945 (1028)
T ss_dssp TSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 00 01468999999999999999999975
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-125 Score=1195.95 Aligned_cols=817 Identities=30% Similarity=0.426 Sum_probs=684.0
Q ss_pred hcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCC-
Q 002230 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW- 196 (950)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~- 196 (950)
...++++++.|+++...||++++ +.+|+++||+|+++.++++++|+.+++||+++++++|++++++++++++...+.
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~ 84 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEE 84 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSG
T ss_pred hCCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 35689999999999999999877 999999999999999889999999999999999999999999999998765321
Q ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCe--EEEEecCCcCCCcEEEeCCCCeeccc
Q 002230 197 -PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRKISIYDLLPGDIVHLCMGDQVPAD 273 (950)
Q Consensus 197 -~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~--~~~I~~~dLvvGDiV~l~~Gd~vPaD 273 (950)
...|+|++++++.+++..++..+.+++.++..++|.+ ..+.+++|+|||+ .++|+++||+|||+|.|++||+||||
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 85 TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred chhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 2368888877776666666666666666566666654 4566899999887 69999999999999999999999999
Q ss_pred EEEEee--cceEEEcccccCCCCcccccCC------------CCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCC
Q 002230 274 GLFVSG--FSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (950)
Q Consensus 274 gill~g--~~l~VDeS~LTGEs~pv~k~~~------------~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (950)
|+|+++ .+|.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||.+|++|+|++++.++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 999654 4589999999999999999764 26899999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHH
Q 002230 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (950)
Q Consensus 340 ~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~la 419 (950)
+.+++|+|+++++++.++.++++++++++++++...+ .....+. .....+..+|..++++++++||||||++
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~ai~l~v~aiP~~Lp~~ 315 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGG------SWIRGAIYYFKIAVALAVAAIPEGLPAV 315 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG--GSCSSSS------CHHHHHHHHHHHHHHHHHHHSCTTHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccc------hHHHHHHHHHHHHHHHHHHhcCcchHHH
Confidence 9999999999999999999888777776665432111 0000010 0112345567789999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee---------ccCCCCCCCCC
Q 002230 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE---------VDNSKGTPAFG 490 (950)
Q Consensus 420 v~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~---------~~~~~~~~~~~ 490 (950)
++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..++ .+.....+...
T Consensus 316 vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 395 (995)
T 3ar4_A 316 ITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGE 395 (995)
T ss_dssp HHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCC
T ss_pred HHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccc
Confidence 999999999999999999999999999999999999999999999999999987643211 11111111100
Q ss_pred --------CCCChHHHHHHHHHHHhcCCCceeecC-CCceeecCChhhhHHHHHHHHcCC-Ch--H-------------H
Q 002230 491 --------SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGG-DF--Q-------------A 545 (950)
Q Consensus 491 --------~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~a~~~g~-~~--~-------------~ 545 (950)
.....+....+......|+++.+..++ ++..+..|||+|.|++.++.+.|. +. . .
T Consensus 396 ~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~ 475 (995)
T 3ar4_A 396 VLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSV 475 (995)
T ss_dssp EEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhh
Confidence 000112233455666777777665432 345566799999999999988765 11 1 1
Q ss_pred HhhhcceEEEecCCCCCceEEEEEEcCCC-----cEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHH-
Q 002230 546 ERQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF- 619 (950)
Q Consensus 546 ~~~~~~i~~~~pF~s~~k~msvvv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~- 619 (950)
.+..+++++++||+|+||||+|+++.+++ ++.+|+|||||.|+++|+++.. ++...+++++.++.+.+.+++|
T Consensus 476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 554 (995)
T 3ar4_A 476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWG 554 (995)
T ss_dssp HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHH
T ss_pred hhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHH
Confidence 35678999999999999999999987655 6889999999999999988765 3467889999999999999999
Q ss_pred -HhcccceeEEEEEEcCCCCCC-------CCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH
Q 002230 620 -ASEALRTLCLACMEIGNEFSA-------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK 691 (950)
Q Consensus 620 -a~~glR~l~~A~~~~~~~~~~-------~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~ 691 (950)
+++|+||+++|||+++..... ....+|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.
T Consensus 555 ~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~ 634 (995)
T 3ar4_A 555 TGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAI 634 (995)
T ss_dssp HSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred hhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 999999999999988643211 012237899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCccCC----ceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhh
Q 002230 692 AIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (950)
Q Consensus 692 ~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~ 767 (950)
++|+++||...+ +.+++|+++..+.++++.+.+.+..+|||++|+||.++|+.+|++ |++|+|+|||.||+|||+
T Consensus 635 ~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk 713 (995)
T 3ar4_A 635 AICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALK 713 (995)
T ss_dssp HHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHH
T ss_pred HHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHH
Confidence 999999997643 468999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHH
Q 002230 768 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ 847 (950)
Q Consensus 768 ~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~q 847 (950)
+||+||||| +|+++|+++||+++++|+|.+++++++|||++|+||+|+++|++++|+..++..+++++++.+.||+++|
T Consensus 714 ~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~q 792 (995)
T 3ar4_A 714 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQ 792 (995)
T ss_dssp HSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHH
T ss_pred HCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHH
Confidence 999999999 9999999999999999999999999999999999999999999999999998888888888889999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHH--Hh--ccc-----ccccC
Q 002230 848 LLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQ--TR--GKA-----VFRLD 918 (950)
Q Consensus 848 ll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~--~~--~~~-----~~~~~ 918 (950)
+||+|+++|.+|+++|++|||++++|+|||+.++++++++.++..++.+++|+.++.++.+ ++ ... +..+.
T Consensus 793 il~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (995)
T 3ar4_A 793 LLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLT 872 (995)
T ss_dssp HHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGG
T ss_pred HHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhc
Confidence 9999999999999999999999999999999999999999999989999999987654322 11 000 00000
Q ss_pred ------C--CC---------cccccchHHhHHHHHHHHHHHHhcccC
Q 002230 919 ------G--PD---------PDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 919 ------~--~~---------~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+ .. .....+|++|++||++|+||.||||+.
T Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~ 919 (995)
T 3ar4_A 873 HFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSE 919 (995)
T ss_dssp GCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred cccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhcc
Confidence 0 00 012368999999999999999999975
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-118 Score=1101.94 Aligned_cols=740 Identities=22% Similarity=0.366 Sum_probs=608.7
Q ss_pred cCHHH-HHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCC
Q 002230 119 GGVEG-IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP 197 (950)
Q Consensus 119 ~~v~~-l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~ 197 (950)
+++++ ++..|+++...||++++ +.+|+++||+|+++.++ +++|..++++|+++++++++++++++++++
T Consensus 70 ~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g------- 139 (920)
T 1mhs_A 70 GGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE------- 139 (920)
T ss_dssp HHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------
T ss_pred CccchhHHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 44444 45678999889999987 99999999999998654 778889999999999999999999988765
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEE
Q 002230 198 KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277 (950)
Q Consensus 198 ~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill 277 (950)
.|.|+..+++.+++..++..+++|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||+|+
T Consensus 140 -~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll 217 (920)
T 1mhs_A 140 -DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIV 217 (920)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEE
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEE
Confidence 578887666666666667777777777777777653 456899999999999999999999999999999999999999
Q ss_pred eecc-eEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHH
Q 002230 278 SGFS-VLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (950)
Q Consensus 278 ~g~~-l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (950)
+|++ +.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|++.+++.+++.+++|+|+.+++++.+
T Consensus 218 ~g~~~l~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~ 296 (920)
T 1mhs_A 218 TDDAFLQVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTI 296 (920)
T ss_dssp EESSCCEEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHH
T ss_pred ecCceeeeeccccCCCCcceEecCCC-eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHH
Confidence 9995 899999999999999998765 69999999999999999999999999999999999888899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhcccc
Q 002230 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKA 436 (950)
Q Consensus 357 i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~i 436 (950)
+..+++++++++|+.+ + +... .+...|..++++++++||||||+++|++++.++.+|+++|+
T Consensus 297 l~~~~~~~~~i~~~~~---~------------~~~~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i 358 (920)
T 1mhs_A 297 LLILVIFTLLIVWVSS---F------------YRSN---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA 358 (920)
T ss_dssp HHHHHHHHHHHHHHTT---T------------TTTC---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHH---H------------hcCC---cHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCe
Confidence 8776665554443321 1 1111 35677888999999999999999999999999999999999
Q ss_pred ccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeec
Q 002230 437 LVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516 (950)
Q Consensus 437 lvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 516 (950)
+||+++++|+||++++||||||||||+|+|+|.+++..+.. .+++ + ....++|+...
T Consensus 359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~---------------~~~~---l-l~~a~l~~~~~---- 415 (920)
T 1mhs_A 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV---------------DPED---L-MLTACLAASRK---- 415 (920)
T ss_dssp CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC---------------CCTH---H-HHHHHHSCCCS----
T ss_pred EEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCC---------------CHHH---H-HHHHHHhcCCc----
Confidence 99999999999999999999999999999999887643211 0112 2 23344444321
Q ss_pred CCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhcccccc
Q 002230 517 EGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596 (950)
Q Consensus 517 ~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~ 596 (950)
.. .+||+|.|+++++.+.+.. ......+++++.+||+|.+|+|+++++.++++..+++|||||.++++|+.
T Consensus 416 ~~-----~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~--- 486 (920)
T 1mhs_A 416 KK-----GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE--- 486 (920)
T ss_dssp SC-----SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC---
T ss_pred cc-----CCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc---
Confidence 01 2499999999998776532 22345688999999999999999999876777788999999999999974
Q ss_pred CCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCC
Q 002230 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG 676 (950)
Q Consensus 597 ~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aG 676 (950)
..+++++.++.+.+.+++|+++|+||+++||+. .|++++|+|+++++||+||+++++|++|+++|
T Consensus 487 ----~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aG 551 (920)
T 1mhs_A 487 ----DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLG 551 (920)
T ss_dssp ----SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHT
T ss_pred ----cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-----------cccccEEEEEEEEeccccccHHHHHHHHhhcC
Confidence 135677788889999999999999999999862 14678999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCcc----CCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCE
Q 002230 677 ITVRMVTGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752 (950)
Q Consensus 677 i~v~m~TGD~~~ta~~ia~~~gi~~----~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~ 752 (950)
|+++|+|||+..||.+||+++||.. .+..+++|. ..++++++.+.+.+..||+|++|+||.++|+.+|++ |++
T Consensus 552 I~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~ 628 (920)
T 1mhs_A 552 LSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYL 628 (920)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCC
T ss_pred ceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhC-CCe
Confidence 9999999999999999999999963 233566666 567788888889999999999999999999999999 999
Q ss_pred EEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (950)
Q Consensus 753 v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~ 832 (950)
|+|+|||.||+|||++|||||||| +|+++||++||+++++|+|++|++++++||++|+||+|+++|+++.|+....+.+
T Consensus 629 Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~ 707 (920)
T 1mhs_A 629 VAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLG 707 (920)
T ss_dssp CEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999998754444
Q ss_pred HHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002230 833 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGK 912 (950)
Q Consensus 833 ~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~ 912 (950)
+...+.+ .|+++.|++|+|+++|. |+++|++|+++.+ ++|++++.+ .+|..++..+++..+..++.++...
T Consensus 708 ~~~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~ 778 (920)
T 1mhs_A 708 LWIAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMY 778 (920)
T ss_dssp HHHHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHh-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334 34899999999999998 8999999998764 678765542 2222233345444443333222111
Q ss_pred cccccCCC--CcccccchHHhHHHHHHHHHHHHhcccCCC
Q 002230 913 AVFRLDGP--DPDLILNTLIFNTFVFCQVCLSTCIRSTEP 950 (950)
Q Consensus 913 ~~~~~~~~--~~~~~~~t~~F~~~v~~q~~n~~~~r~~~~ 950 (950)
. ++..+. ......+|++|++++++|+||.||||+..|
T Consensus 779 ~-~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~ 817 (920)
T 1mhs_A 779 A-QGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGP 817 (920)
T ss_dssp T-TTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSS
T ss_pred H-hcccccccchhhHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 0 110110 112357899999999999999999998653
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-115 Score=1078.20 Aligned_cols=747 Identities=21% Similarity=0.330 Sum_probs=586.1
Q ss_pred CHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCC
Q 002230 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (950)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~ 199 (950)
.++++.+.|+++ ..||++++ +++|+++||+|+++.++ +++|+.++++|+++++++|+++++++++++.. ++.+..
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~-~~~~~~ 92 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANG-DGRPPD 92 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC-TTSCSC
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence 466677778888 68999877 99999999999998776 77888889999999999999999999888743 233457
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEee
Q 002230 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (950)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g 279 (950)
|+|++.|++.+++..++..+.+++.++..++|.+ ..+.+++|+|||++++|+++||+|||+|.|++||+|||||+|++|
T Consensus 93 ~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp CTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEc
Confidence 8998766554444444444555555555555544 345689999999999999999999999999999999999999999
Q ss_pred cceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHH
Q 002230 280 FSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359 (950)
Q Consensus 280 ~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~ 359 (950)
++|.||||+|||||.|+.|..++ .+|+||.|.+|+++++|++||.+|++|++.+++.+ ..+++|+|+.+++++.++..
T Consensus 172 ~~l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~ 249 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCIC 249 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHH
T ss_pred CcccccccccCCCCcceEecCCC-ccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHH
Confidence 98899999999999999998776 59999999999999999999999999999998877 56779999999999877433
Q ss_pred -HHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhcccccc
Q 002230 360 -IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (950)
Q Consensus 360 -~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilv 438 (950)
+++.+++++++++. + .+. .+...+..++++++++||||||+++++++++++.+|+++|++|
T Consensus 250 ~~~~~~~~~~~~~~~---~-----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilv 311 (885)
T 3b8c_A 250 SIAIGMVIEIIVMYP---I-----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 311 (885)
T ss_dssp HHHHHHHHHSTTTTT---T-----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCC
T ss_pred HHHHHHHHHHHHHHH---H-----ccC----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 22222222221110 0 000 1224567889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCC
Q 002230 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (950)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (950)
|+++++|+||++|+||||||||||+|+|+|.+.+.. .+. ...++ .+++..+ +.|+..
T Consensus 312 k~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----------~~~~~--~~ll~~a-a~~~~~------- 368 (885)
T 3b8c_A 312 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----------KGVEK--DQVLLFA-AMASRV------- 368 (885)
T ss_dssp SSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSC-----------SSTTH--HHHHHHH-HHHCCS-------
T ss_pred CCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccC-----------CCCCH--HHHHHHH-HHHhCC-------
Confidence 999999999999999999999999999999642210 000 00111 2223223 333321
Q ss_pred CceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCC
Q 002230 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (950)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (950)
.++||+|.|+++++.+ ....+..+++++.+||+|.+|+|+++++..+++.+.++|||||.++++|+.
T Consensus 369 ----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~----- 435 (885)
T 3b8c_A 369 ----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA----- 435 (885)
T ss_dssp ----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----
T ss_pred ----CCCCchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----
Confidence 1579999999987642 112234677888999999999999988765667778999999999999963
Q ss_pred CeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCE
Q 002230 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT 678 (950)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~ 678 (950)
+++.++.+.+.+++|+++|+|++++||++++.+. .+..|++++++|+++++||+||+++++|++|+++||+
T Consensus 436 ------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~ 506 (885)
T 3b8c_A 436 ------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVN 506 (885)
T ss_dssp ------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCC
T ss_pred ------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc---ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCc
Confidence 1112334677889999999999999999876532 2345788999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCccC--CceeeeCccccc-CCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEE
Q 002230 679 VRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (950)
Q Consensus 679 v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~-~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~ 755 (950)
++|+|||+..||.++|+++||..+ ...+++|.+++. +++.++++.+.+..||+|++|+||.++|+.+|++ |++|+|
T Consensus 507 v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Vam 585 (885)
T 3b8c_A 507 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGM 585 (885)
T ss_dssp CEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCCB
T ss_pred EEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC-CCeEEE
Confidence 999999999999999999999642 134677777765 6666777888888999999999999999999998 999999
Q ss_pred EcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (950)
Q Consensus 756 vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~ 835 (950)
+|||.||+|||++||+||||| +|+++||++||+++++|+|.+|++++++||++|+||+|++.|++++|+..++..+..
T Consensus 586 ~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~- 663 (885)
T 3b8c_A 586 TGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI- 663 (885)
T ss_dssp CCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHH-
T ss_pred EcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999 899999999999999999999999999999999999999999999999754433333
Q ss_pred hhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc--
Q 002230 836 CLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA-- 913 (950)
Q Consensus 836 ~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~-- 913 (950)
....+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.++..++..++++.+..+++++.+..
T Consensus 664 ~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 735 (885)
T 3b8c_A 664 ALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTD 735 (885)
T ss_dssp HSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTT
T ss_pred HHccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334567999999999999999875 88888877542 233 23333 333333455666766666554443321
Q ss_pred c----cccCCCC-ccccc-chHHhHHHHHHHHHHHHhcccCC
Q 002230 914 V----FRLDGPD-PDLIL-NTLIFNTFVFCQVCLSTCIRSTE 949 (950)
Q Consensus 914 ~----~~~~~~~-~~~~~-~t~~F~~~v~~q~~n~~~~r~~~ 949 (950)
+ ++++... ..... .|+.|.+++++|+ +.||||+..
T Consensus 736 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~ 776 (885)
T 3b8c_A 736 FFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS 776 (885)
T ss_dssp TTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT
T ss_pred ccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC
Confidence 1 1211000 01123 4456678888886 899999853
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-85 Score=794.75 Aligned_cols=545 Identities=25% Similarity=0.362 Sum_probs=451.5
Q ss_pred CCccHHHHHHHHHhhHHHHHHHH--HHH-HHHH---h-----hccc------cCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 002230 159 PARGFWVYVWEALHDMTLMILAV--CAL-VSLV---V-----GIAT------EGWPKGAHDGLGIVMSILLVVFVTATSD 221 (950)
Q Consensus 159 ~~~~f~~~~~~~~~~~~~~il~i--~a~-~s~~---~-----~~~~------~~~~~~~~d~~~i~~~illv~~v~~~~~ 221 (950)
.+.+||+..|+++++....+..+ .++ .+++ + ++.. .+..+.|||+.++++.++++ ++
T Consensus 129 ~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~ll------g~ 202 (736)
T 3rfu_A 129 GGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLL------GQ 202 (736)
T ss_dssp TTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHH------HH
T ss_pred hhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHH------HH
Confidence 68899999999998654333221 111 1111 1 1111 12235688887665544443 77
Q ss_pred HHHHHHHHHhHh------hhcCCeEEEEe-CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCC
Q 002230 222 YKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (950)
Q Consensus 222 ~~~~~~~~~l~~------~~~~~~v~V~R-~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~ 294 (950)
|.+.+++++..+ ...+..++|+| ||++++|+++||+|||+|.|++||+|||||++++|++ .||||+|||||.
T Consensus 203 ~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~ 281 (736)
T 3rfu_A 203 VLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPI 281 (736)
T ss_dssp HHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCccc
Confidence 777776554332 23466888887 9999999999999999999999999999999999985 999999999999
Q ss_pred cccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (950)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~ 374 (950)
|+.|..++. +++||.+.+|.++++|++||.+|.+|+|++++.+++.+++|+|+.+|+++.+++++++++++++|++|..
T Consensus 282 Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~ 360 (736)
T 3rfu_A 282 PVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWAL 360 (736)
T ss_dssp CEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEeccCCc-CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988765 9999999999999999999999999999999999999999999999999999999999999999988753
Q ss_pred HHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEe
Q 002230 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (950)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (950)
.. .. . .+...+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+||++|+||
T Consensus 361 ~~-------~~-~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~ 424 (736)
T 3rfu_A 361 LG-------PQ-P--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLV 424 (736)
T ss_dssp HC-------SS-S--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEE
T ss_pred hC-------CC-c--------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEE
Confidence 21 00 0 12356788999999999999999999999999999999999999999999999999999
Q ss_pred eCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHH
Q 002230 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (950)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (950)
||||||||+|+|+|.+++..+.. .++.+.+ +.... ..+.||++.|+++
T Consensus 425 fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~---aa~le-------------~~s~hPla~Aiv~ 472 (736)
T 3rfu_A 425 VDKTGTLTEGHPKLTRIVTDDFV----------------EDNALAL---AAALE-------------HQSEHPLANAIVH 472 (736)
T ss_dssp ECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHH---HHHHH-------------HSSCCHHHHHHHH
T ss_pred EeCCCCCcCCceEEEEEEecCCC----------------HHHHHHH---HHHHh-------------hcCCChHHHHHHH
Confidence 99999999999999998832210 1122222 21111 1267999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHH
Q 002230 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (950)
Q Consensus 535 ~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (950)
++.+.+... ....+|++.+++. +.....+.. +.+|+++.+.+.+.. ...+.+
T Consensus 473 ~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~---------------~~~~~~ 524 (736)
T 3rfu_A 473 AAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD---------------NAPLFE 524 (736)
T ss_dssp HHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC---------------CHHHHH
T ss_pred HHHhcCCCc---------cCcccccccCCce-EEEEECCEE---EEEcCHHHHHHcCCC---------------hhHHHH
Confidence 998776543 2346788877663 333443433 345998877654321 123556
Q ss_pred HHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 002230 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (950)
Q Consensus 615 ~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia 694 (950)
..++++.+|+|++++|+ |.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|
T Consensus 525 ~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia 588 (736)
T 3rfu_A 525 KADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588 (736)
T ss_dssp HHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEEE----------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 77889999999999994 56899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 695 ~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
+++||.. ++++++|+||.++|+.+|++ |+.|+|+|||.||+|||++||+|||
T Consensus 589 ~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvGIA 640 (736)
T 3rfu_A 589 GTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIGIA 640 (736)
T ss_dssp HHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEEEE
T ss_pred HHcCCCE---------------------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhHHHHHhCCEEEE
Confidence 9999975 99999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (950)
Q Consensus 775 mg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~ 832 (950)
|| +|+++++++||++++++++.++++++++||++++||++|+.|++.||+++++++.
T Consensus 641 mg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 641 MG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp ES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999999999999998876
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-86 Score=806.68 Aligned_cols=644 Identities=24% Similarity=0.286 Sum_probs=494.0
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHHhcCH
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v 121 (950)
|+.|..+.|+.+.+.+++.+++||+.+.++.+.|++. ..+..++.+++++.||++.+.+..+..+.++.+.+.....+
T Consensus 13 Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~--~~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (723)
T 3j09_A 13 CAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK--RIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYV 90 (723)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSS
T ss_pred chHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCC--cCCHHHHHHHHHhcCCcccccccccchhhHHHHHHHHHHHH
Confidence 5678899999999999999999999999999999765 45667788889999998876543321111222222222222
Q ss_pred HHHHH----HhCCCccCCCChhHHHHHHHHhhcCCCccCCC----CCccHHHHHHHHHhhHHHHH------HHHHHHHHH
Q 002230 122 EGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTES----PARGFWVYVWEALHDMTLMI------LAVCALVSL 187 (950)
Q Consensus 122 ~~l~~----~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~----~~~~f~~~~~~~~~~~~~~i------l~i~a~~s~ 187 (950)
.+++. .+.. .|..+. ..|-.-.+..+ .+.+|++..|+++++....+ ...++++..
T Consensus 91 ~~~~~~~~~~~~~---~~~~~~--------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s 159 (723)
T 3j09_A 91 AAFAGVLLLFLAH---FISLPY--------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLAS 159 (723)
T ss_dssp TTTTHHHHHHHTT---SSCSSS--------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---Hhccch--------HHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 22111 1111 011110 00111111111 34567777777776543332 122222211
Q ss_pred Hhhccc-cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhH----h--hhcCCeEEEEeCCeEEEEecCCcCCCc
Q 002230 188 VVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLD----R--EKKKITVQVARNGFRRKISIYDLLPGD 260 (950)
Q Consensus 188 ~~~~~~-~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~----~--~~~~~~v~V~R~g~~~~I~~~dLvvGD 260 (950)
++.... .+.+..||++.++++.+++ +++|.++++.++.+ + ...+..++|+|||++++|+++||+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~i~~~~~------ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GD 233 (723)
T 3j09_A 160 VLSTAGVLPREYSFYETSVLLLAFLL------LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGD 233 (723)
T ss_dssp HHHHHTTTTCCCCCCTTHHHHHHHHH------HHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTC
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCC
Confidence 111111 1112237887765554443 47777777765432 2 345678999999999999999999999
Q ss_pred EEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCC
Q 002230 261 IVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (950)
Q Consensus 261 iV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (950)
+|.|++||+|||||++++|++ .||||+|||||.|+.|..++ .+|+||.+.+|.++++|+++|.+|.+|+|++++.+++
T Consensus 234 iv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~-~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~ 311 (723)
T 3j09_A 234 IVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGD-EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 311 (723)
T ss_dssp EEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTC-EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSC
T ss_pred EEEECCCCEEeeEEEEEECCe-EEecccccCCCcceeecCCC-eeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhh
Confidence 999999999999999999974 99999999999999998876 5999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHH
Q 002230 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (950)
Q Consensus 341 ~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav 420 (950)
.+++|+|+.+|+++.++.++.++++++++++|... .+. .+...+..++++++++|||+|++++
T Consensus 312 ~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~la~ 374 (723)
T 3j09_A 312 GSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGLAT 374 (723)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------TTC----------TTCCSHHHHHHHHHHHSCTTHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCC----------cHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 99999999999999999999888888877654210 000 1223467789999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHH
Q 002230 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (950)
Q Consensus 421 ~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (950)
|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+
T Consensus 375 p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l~~ 438 (723)
T 3j09_A 375 PTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL 438 (723)
T ss_dssp HHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHHHH
T ss_pred HHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC----------------HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875321 1122222
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcE--EE
Q 002230 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF--RV 578 (950)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~--~~ 578 (950)
+..... .+.||++.|+++++.+.+..... ..+|++. ++.+. ..
T Consensus 439 ---aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~---------~~~~~~~----------~g~g~~~~~ 483 (723)
T 3j09_A 439 ---AAIAER-------------RSEHPIAEAIVKKALEHGIELGE---------PEKVEVI----------AGEGVVADG 483 (723)
T ss_dssp ---HHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCS---------CCCCEEE----------TTTEEEETT
T ss_pred ---HHHHhc-------------cCCCchhHHHHHHHHhcCCCcCC---------ccceEEe----------cCCceEEEE
Confidence 211111 26799999999999887764321 1112211 11111 12
Q ss_pred EEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeecc
Q 002230 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658 (950)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~ 658 (950)
+.+|+++.+.+... +.. +.+.+..++++.+|+|++++|+ |++++|+++++
T Consensus 484 ~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va~----------------~~~~~G~i~i~ 533 (723)
T 3j09_A 484 ILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVS 533 (723)
T ss_dssp EEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEEEE
T ss_pred EEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE----------------CCEEEEEEeec
Confidence 45688776544221 111 2466778889999999999994 67999999999
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
|++||+++++|++|+++|++++|+|||+..+|.++|+++||.. ++++++|+||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K 586 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQK 586 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCH
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE---------------------------EEccCCHHHH
Confidence 9999999999999999999999999999999999999999974 9999999999
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHH
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQ 818 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~ 818 (950)
..+|+.++++ +.|+|+|||.||+|||++||+||||| +|++.++++||++++++++.++++++++||++|+||++|+.
T Consensus 587 ~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~ 663 (723)
T 3j09_A 587 SEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIF 663 (723)
T ss_dssp HHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976 78999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 002230 819 FQLTVNVVALIVNFSS 834 (950)
Q Consensus 819 ~~l~~N~~~~~~~~~~ 834 (950)
|+++||++.+++++.+
T Consensus 664 ~a~~~n~~~i~~a~~~ 679 (723)
T 3j09_A 664 WALIYNVILIPAAAGL 679 (723)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999988887654
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-82 Score=762.86 Aligned_cols=500 Identities=26% Similarity=0.345 Sum_probs=419.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhH----h--hhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecc
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLD----R--EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~----~--~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPa 272 (950)
.|||+.++++.+++ +++|.++++.++.. + ...+.+++|+|||++++|+++||+|||+|.|++||+|||
T Consensus 94 ~~~~~~~~i~~~~~------ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPa 167 (645)
T 3j08_A 94 SFYETSVLLLAFLL------LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPV 167 (645)
T ss_dssp SCCCSHHHHHHHHH------HHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCS
T ss_pred hHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEee
Confidence 48887766554443 47777777765432 2 345678999999999999999999999999999999999
Q ss_pred cEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHH
Q 002230 273 DGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352 (950)
Q Consensus 273 Dgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~ 352 (950)
||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|+++|.+|.+|++++++.+++.+++|+|+.+|+
T Consensus 168 Dg~vl~G~-~~VdeS~LTGES~Pv~K~~g~-~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~ 245 (645)
T 3j08_A 168 DGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADK 245 (645)
T ss_dssp EEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHH
T ss_pred EEEEEECc-EEEEcccccCCCCceecCCCC-EeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHH
Confidence 99999997 499999999999999998876 5999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHh
Q 002230 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMM 432 (950)
Q Consensus 353 ~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~ 432 (950)
++.++.++.++++++++++|... .+. .+...+..++++++++|||+|++++|+++..++.+++
T Consensus 246 ~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a 308 (645)
T 3j08_A 246 VVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGA 308 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCC-------CSC----------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------cCC----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877764210 010 0112356678999999999999999999999999999
Q ss_pred ccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCc
Q 002230 433 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGE 512 (950)
Q Consensus 433 ~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 512 (950)
++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+ +.....
T Consensus 309 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~----------------~~~~l~~---aa~~e~--- 366 (645)
T 3j08_A 309 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL---AAIAER--- 366 (645)
T ss_dssp TTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC----------------HHHHHHH---HHHHHT---
T ss_pred HCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC----------------HHHHHHH---HHHHhh---
Confidence 999999999999999999999999999999999999999875321 1122222 211111
Q ss_pred eeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcE--EEEEcCchHHHHHh
Q 002230 513 VVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF--RVHCKGASEIILAA 590 (950)
Q Consensus 513 ~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~--~~~~KGa~e~il~~ 590 (950)
.+.||++.|+++++.+.+.+... ..+|++. ++.+. ..+.+|+++.+.+.
T Consensus 367 ----------~s~hPla~Aiv~~a~~~g~~~~~---------~~~~~~~----------~g~g~~~~~v~~g~~~~~~~~ 417 (645)
T 3j08_A 367 ----------RSEHPIAEAIVKKALEHGIELGE---------PEKVEVI----------AGEGVVADGILVGNKRLMEDF 417 (645)
T ss_dssp ----------TCCSHHHHHHHHHHHHTTCCCCS---------CCCCEEE----------TTTEEEETTEEEECHHHHHHT
T ss_pred ----------cCCChhHHHHHHHHHhcCCCcCC---------ccceEEe----------cCCceEEEEEEECCHHHHHhc
Confidence 26799999999999887764321 1112211 11111 12456887765432
Q ss_pred ccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHH
Q 002230 591 CDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVA 670 (950)
Q Consensus 591 c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~ 670 (950)
.. +.. +.+.+..++++.+|+|++++|+ |++++|+++++|++||+++++|+
T Consensus 418 ~~----------~~~----~~~~~~~~~~~~~g~~~l~va~----------------~~~~~G~i~~~D~l~~~~~~~i~ 467 (645)
T 3j08_A 418 GV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQ 467 (645)
T ss_dssp TC----------CCC----HHHHHHHHHHHTTTCCCEEEEE----------------TTEEEEEEEEECCCTTTHHHHHH
T ss_pred CC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE----------------CCEEEEEEEecCCchhHHHHHHH
Confidence 21 111 2466777889999999999994 57899999999999999999999
Q ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCC
Q 002230 671 ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750 (950)
Q Consensus 671 ~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g 750 (950)
+|+++|++++|+|||+..+|.++|+++||.. ++++++|++|..+++.++++
T Consensus 468 ~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K~~~v~~l~~~-- 518 (645)
T 3j08_A 468 ELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKKLQAK-- 518 (645)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHHHTTT--
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE---------------------------EEEeCCHHhHHHHHHHHhhC--
Confidence 9999999999999999999999999999974 99999999999999999976
Q ss_pred CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830 (950)
Q Consensus 751 ~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~ 830 (950)
+.|+|+|||.||+|||++||+||||| +|++.++++||++++++++.++.+++++||++|+||++|+.|+++||++.+++
T Consensus 519 ~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 519 EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999 99999999999999999999999999999999999999999999999998887
Q ss_pred HHHH
Q 002230 831 NFSS 834 (950)
Q Consensus 831 ~~~~ 834 (950)
++.+
T Consensus 598 a~~~ 601 (645)
T 3j08_A 598 AAGL 601 (645)
T ss_dssp HTTT
T ss_pred HHHh
Confidence 7643
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-31 Score=289.24 Aligned_cols=260 Identities=23% Similarity=0.355 Sum_probs=199.2
Q ss_pred HHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHH
Q 002230 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (950)
Q Consensus 426 ~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (950)
.++.+++++|+++|+.+++|.|+++++||||||||||+|+|.|.++. +. ++.+.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~---- 59 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA---- 59 (263)
Confidence 35788999999999999999999999999999999999999998764 00 1122211
Q ss_pred HhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchH
Q 002230 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585 (950)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e 585 (950)
+..+ ..+.||...|+.+++...|...... ..|. ...+.+....++|...
T Consensus 60 -----~~~e-------~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~~----------~~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 60 -----ASVE-------ALSSHPIAKAIVKYAKEQGVKILEV---------KDFK----------EISGIGVRGKISDKII 108 (263)
Confidence 1111 1267999999998887665431110 0010 1112222222221100
Q ss_pred HHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccH
Q 002230 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 665 (950)
Q Consensus 586 ~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~ 665 (950)
. +... .++.+ +.++ .+..+.|.+.+.|+++|++
T Consensus 109 ~-----------------~G~~-------------~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 109 E-----------------VKKA-------------ENNND-IAVY----------------INGEPIASFNISDVPRPNL 141 (263)
Confidence 0 0000 01222 2222 3456789999999999999
Q ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHH
Q 002230 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (950)
Q Consensus 666 ~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l 745 (950)
.++++.|++.|+++.|+|||+..++..+++++||.. +|+...|++|..+++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 999999999999999999999999999999999964 77778899999999999
Q ss_pred hhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHH
Q 002230 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816 (950)
Q Consensus 746 ~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~ 816 (950)
+.. ++.|+|+|||.||++|++.||+|++|| ++++.+++.||++++++++..+.++++.+|+++++|++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 988 888999999999999999999999999 788999999999999899999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=241.44 Aligned_cols=277 Identities=29% Similarity=0.405 Sum_probs=203.8
Q ss_pred HHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHH
Q 002230 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (950)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (950)
+.++++++|+++|+++++|+|+++++||||||||||.+.+.+.+++..+. . .++.+.+ +..
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~---~~~ 69 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRL---AAI 69 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHH---HHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C--------------HHHHHHH---HHH
Confidence 56889999999999999999999999999999999999999988876532 0 1233332 111
Q ss_pred hcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEE--EEEcCch
Q 002230 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGAS 584 (950)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~--~~~KGa~ 584 (950)
. + ..+.||.+.|+.+++.+.|...... +.+.. ..+.+.. .+.+|.+
T Consensus 70 ~------e-------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~~---------------~~G~~~~~~~~~~g~~ 117 (287)
T 3a1c_A 70 A------E-------RRSEHPIAEAIVKKALEHGIELGEP----EKVEV---------------IAGEGVVADGILVGNK 117 (287)
T ss_dssp H------T-------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEEE---------------ETTTEEEETTEEEECH
T ss_pred H------h-------hcCCCHHHHHHHHHHHhcCCCcccc----cccee---------------ecCCCeEEEEEEECCH
Confidence 1 1 1267999999999998887642110 00111 1111111 1334655
Q ss_pred HHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCcc
Q 002230 585 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664 (950)
Q Consensus 585 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~ 664 (950)
+.+-..+. +.++ .+.+..+.+..+|.+++++++ +..+++.+...++++|+
T Consensus 118 ~~~~~~~~----------~~~~----~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~g 167 (287)
T 3a1c_A 118 RLMEDFGV----------AVSN----EVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKES 167 (287)
T ss_dssp HHHHHTTC----------CCCH----HHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCTT
T ss_pred HHHHhcCC----------CccH----HHHHHHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccccchh
Confidence 44322111 1111 244556778889999999884 35788989999999999
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHH
Q 002230 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (950)
Q Consensus 665 ~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~ 744 (950)
+.++++.|+++|+++.++||++...+..+++.+|+.. +|....|..|...++.
T Consensus 168 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~~ 220 (287)
T 3a1c_A 168 AKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKK 220 (287)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce---------------------------eeeecChHHHHHHHHH
Confidence 9999999999999999999999999999999999864 6777789999999999
Q ss_pred HhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHH
Q 002230 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 814 (950)
Q Consensus 745 l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~ 814 (950)
++.. +.++|+||+.||++|++.|++++++| ++.+..+..||+++.++++..+.+++..+|+++++|+
T Consensus 221 l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 221 LQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HhcC--CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 8866 67899999999999999999999998 6777677889999988889999999999999999885
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-24 Score=229.81 Aligned_cols=276 Identities=26% Similarity=0.350 Sum_probs=195.5
Q ss_pred cccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecC
Q 002230 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (950)
Q Consensus 438 vr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (950)
+|+++++|+|++++.|||||+||||.|+|+|.+++..+.. .+.....+ .++..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~----------------~~~~~~~~-~~~~~---------- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS----------------EDELLQIA-ASLEA---------- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC----------------HHHHHHHH-HHHHT----------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC----------------HHHHHHHH-HHhhc----------
Confidence 5889999999999999999999999999999998765431 11222222 11111
Q ss_pred CCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccC
Q 002230 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (950)
Q Consensus 518 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (950)
.+.+|...++.+++...|..... ...+..++- +.... ...+. . +..|.++.+...+..
T Consensus 54 -----~s~~~~~~a~~~~~~~~g~~~~~----~~~~~~~~g----~~~~~--~~~~~--~-~~~~~~~~~~~~~~~---- 111 (280)
T 3skx_A 54 -----RSEHPIAAAIVEEAEKRGFGLTE----VEEFRAIPG----KGVEG--IVNGR--R-YMVVSPGYIRELGIK---- 111 (280)
T ss_dssp -----TCCSHHHHHHHHHHHHTTCCCCC----CEEEEEETT----TEEEE--EETTE--E-EEEECHHHHHHTTCC----
T ss_pred -----cCCCHHHHHHHHHHHhcCCCCCC----ccceeecCC----CEEEE--EECCE--E-EEEecHHHHHHcCCC----
Confidence 14578899999988877754211 111111111 00111 11111 1 123555554433221
Q ss_pred CCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCC
Q 002230 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (950)
Q Consensus 598 ~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi 677 (950)
.. +....+..++.+.+.+++ +..++|.+.+.|+++|++.++++.|++.|+
T Consensus 112 ------~~--------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 112 ------TD--------ESVEKLKQQGKTVVFILK----------------NGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp ------CC--------TTHHHHHTTTCEEEEEEE----------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred ------ch--------HHHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 01 123456667777776663 457889999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEc
Q 002230 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (950)
Q Consensus 678 ~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vG 757 (950)
++.++||++...+..+++.+|+.. .|....|.+|...++.+.+. . .++|+|
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~~~~k~~~~k~~~~~-~-~~~~vG 212 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD---------------------------YFAEVLPHEKAEKVKEVQQK-Y-VTAMVG 212 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCGGGHHHHHHHHHTT-S-CEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh---------------------------HhHhcCHHHHHHHHHHHHhc-C-CEEEEe
Confidence 999999999999999999999964 78888999999999999887 4 468999
Q ss_pred CCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (950)
Q Consensus 758 DG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~ 822 (950)
|+.||++|++.|++|++|| ++.+..++.||+++..+++..+.++++.+|+++.++++++.|++.
T Consensus 213 D~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 213 DGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred CCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 888888999999999999999999999999999999999999864
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-25 Score=204.47 Aligned_cols=107 Identities=27% Similarity=0.392 Sum_probs=98.4
Q ss_pred HHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEec
Q 002230 229 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308 (950)
Q Consensus 229 ~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sG 308 (950)
++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+|
T Consensus 4 ~~L~~-l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~-~v~aG 80 (113)
T 2hc8_A 4 KKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGA 80 (113)
T ss_dssp HHHHH-HSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTT
T ss_pred HHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCC-EEEeC
Confidence 34443 4567899999999999999999999999999999999999999998 699999999999999998766 59999
Q ss_pred cEEeeceEEEEEEEEeeccchhhHhhhhcC
Q 002230 309 TKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (950)
Q Consensus 309 t~v~~G~~~~~V~~~G~~T~~g~i~~~~~~ 338 (950)
|.+.+|.++++|+++|.+|.+|+|.+++.+
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~ 110 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVED 110 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHH
Confidence 999999999999999999999999988764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-24 Score=202.74 Aligned_cols=114 Identities=25% Similarity=0.382 Sum_probs=100.1
Q ss_pred HHHHHHHHhHhhhcCCeEEEEeCCe------EEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcc
Q 002230 223 KQSLQFKDLDREKKKITVQVARNGF------RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (950)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~g~------~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv 296 (950)
+.++..++|.+ ..+..++|+|+|+ +++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+
T Consensus 4 ka~~~l~~L~~-l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~pv 81 (124)
T 2kij_A 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPV 81 (124)
T ss_dssp --CCHHHHHHH-TCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSCE
T ss_pred HHHHHHHHHhc-cCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCccE
Confidence 33444555554 4567999999764 6889999999999999999999999999999986 99999999999999
Q ss_pred cccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCC
Q 002230 297 NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (950)
Q Consensus 297 ~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (950)
.|..++ .+|+||.+.+|.+.++|+++|.+|.+|+|++++.++
T Consensus 82 ~k~~g~-~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 82 AKKPGS-TVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp ECCTTE-EECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EeCCCC-EEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 998765 699999999999999999999999999999988764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-22 Score=220.14 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=116.2
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh--ccccEEeecC
Q 002230 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSS 734 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~ar~~ 734 (950)
..+++||+++++++.|+++|++++|+|||...++.++++++|+..++..+...... .+++.+...+ +.+.++++..
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~--~~~~~~~~~~~~~~i~~~~k~~ 215 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMD--FDENGVLKGFKGELIHVFNKHD 215 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEE--ECTTSBEEEECSSCCCTTCHHH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEE--EcccceeEeccccccchhhccc
Confidence 46899999999999999999999999999999999999999997654333321110 1111111111 2234677888
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhh---hcCCcceeecC------CCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL---HEADIGLAMGI------AGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al---~~AdvGiamg~------~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
|.+|...+..+++. ++.|+|+|||.||+||+ +.||+|||||. ++++.+++++|+||++|++.+++.+|.
T Consensus 216 ~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 216 GALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 99999999999888 89999999999999994 59999999995 567778999999999999999998764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=186.24 Aligned_cols=134 Identities=21% Similarity=0.302 Sum_probs=115.2
Q ss_pred cCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeec
Q 002230 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (950)
Q Consensus 524 ~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (950)
.+||+|.|+++++...+ ....+..++++..+||+|+||||+++++.+++++.+++|||||.|+++|+.+. .+|...|
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 57999999999875432 23456789999999999999999999987777889999999999999999875 5888999
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCC
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (950)
++++.++.+.+.++.|+++|+|||++|||.++..........|++|+|+|++||-|.
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999999999999999999999999999976543222346899999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.46 E-value=5.2e-14 Score=143.46 Aligned_cols=128 Identities=17% Similarity=0.232 Sum_probs=109.2
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhh
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (950)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...++.+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------~f~~~--~~K~~~~~~~~~ 104 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------LFQGR--EDKLVVLDKLLA 104 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------HhcCc--CChHHHHHHHHH
Confidence 9999999999999999999999999999999964 44433 677788777766
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC----hhHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQKFVQFQ 820 (950)
Q Consensus 748 ~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~----~~~i~~~i~~gR~~~~~i~k~i~~~ 820 (950)
++| +.++|+||+.||++|++.|++|++|+ ++.+.+++.||+++.+++ +..+.+.+..+|..+.+|++++.|.
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~ 183 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEG 183 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTT
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcc
Confidence 544 57899999999999999999999999 789999999999998764 6778888889999999999999999
Q ss_pred HHHHH
Q 002230 821 LTVNV 825 (950)
Q Consensus 821 l~~N~ 825 (950)
+.||-
T Consensus 184 ~~~~~ 188 (189)
T 3mn1_A 184 HHHHH 188 (189)
T ss_dssp C----
T ss_pred ccccC
Confidence 98873
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.4e-14 Score=106.68 Aligned_cols=56 Identities=41% Similarity=0.615 Sum_probs=50.9
Q ss_pred CcHHHHHHHHHhhhccccccccchhhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhc
Q 002230 17 TSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIH 77 (950)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~ 77 (950)
+|.|+++|||+|+ +|+||+|||||++||+|++|++..++ ++|++..+.+|+.+|.+
T Consensus 1 ~s~e~L~rWR~a~-lVlNa~RRFR~t~dL~K~~e~~~~~r----kiR~~~~v~rAa~~F~~ 56 (57)
T 4aqr_D 1 SSIERLQQWRKAA-LVLNASRRFRYTLDLKKEQETREMRQ----KIRSHAHALLAANRFMD 56 (57)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH-HHhchHhhhhhhcchhhHHHHHHHHH----HHHHHHHHHHHHHHhhc
Confidence 4789999999997 99999999999999999998776654 89999999999999964
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-12 Score=144.10 Aligned_cols=147 Identities=15% Similarity=0.155 Sum_probs=109.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCcee--eeCcccccCCHHHHhhhhccccEEee----
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA--IEGPEFREKSDEELSKLIPKIQVMAR---- 732 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~v--i~g~~~~~~~~~~~~~~~~~~~v~ar---- 732 (950)
-+++|++.+.++.|+++|+++.++||+....+..+++.+|+..--... +.... +..+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~-----------------~tg~~~~~ 239 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGK-----------------LTGQVLGE 239 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-----------------EEEEEESC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCe-----------------eeeeeccc
Confidence 378999999999999999999999999999999999999985311100 00000 0000
Q ss_pred -cChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHH
Q 002230 733 -SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRS 808 (950)
Q Consensus 733 -~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~ 808 (950)
..+..|...++.+.+++| +.++|+|||.||++|++.||+|++| ++.+..++.||.++..+++.++..++.....
T Consensus 240 ~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~ 317 (335)
T 3n28_A 240 VVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALV 317 (335)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHH
T ss_pred ccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHH
Confidence 123445555554443323 6789999999999999999999999 7889999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHH
Q 002230 809 VYINIQKFVQFQLTVN 824 (950)
Q Consensus 809 ~~~~i~k~i~~~l~~N 824 (950)
...++++|+.|.++||
T Consensus 318 ~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 318 AQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HTTCCCCC--------
T ss_pred Hhhhhccccccccccc
Confidence 8889999999999988
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-11 Score=123.85 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=107.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+.++..++++.|+++|+++.++||++...+..+++++|+.. ++.. ...|..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~---------------------------~~~~--~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFLG--KLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEES--CSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------eecC--CCCcHH
Confidence 34567899999999999999999999999999999999964 3332 245677
Q ss_pred HHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHH-H---HHHHHHHHHHHH
Q 002230 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-T---VAKWGRSVYINI 813 (950)
Q Consensus 741 ~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~-~---~i~~gR~~~~~i 813 (950)
.++.+.+++| +.++|+||+.||++|++.|+++++|+ ++.+..++.||+++.+++..+++ . .+...|..+.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 7666554435 67999999999999999999999998 88899999999999887666655 3 344466678888
Q ss_pred HHHHHHHHHH
Q 002230 814 QKFVQFQLTV 823 (950)
Q Consensus 814 ~k~i~~~l~~ 823 (950)
+.++.|.+..
T Consensus 166 ~~~~~~~~~~ 175 (180)
T 1k1e_A 166 DTAQGFLKSV 175 (180)
T ss_dssp HCHHHHHHHG
T ss_pred hhccchhhhh
Confidence 8888877654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=122.32 Aligned_cols=146 Identities=20% Similarity=0.170 Sum_probs=108.6
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-ee--eCccc-ccC--------------
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AI--EGPEF-REK-------------- 715 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~-vi--~g~~~-~~~-------------- 715 (950)
...+.+++.++|++|+++|++++++||++...+..+++++|+..+ ++. +. +|+.+ ...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999998532 222 22 23322 100
Q ss_pred -----------------------CHHHHhhhhc--cccEE-----eecCh--hhHHHHHHHHhhhCC---CEEEEEcCCc
Q 002230 716 -----------------------SDEELSKLIP--KIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGT 760 (950)
Q Consensus 716 -----------------------~~~~~~~~~~--~~~v~-----ar~~P--~~K~~~V~~l~~~~g---~~v~~vGDG~ 760 (950)
.++++.++.. .+.+. ....| .+|...++.+.+++| +.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 1112211111 12222 12224 799999999887655 4689999999
Q ss_pred cCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 761 ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999 888999999999999888888888775
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.16 E-value=4e-11 Score=122.43 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=86.7
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------~~~~~--k~k~~~~~~~~ 109 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------IYQGQ--DDKVQAYYDIC 109 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------EECSC--SSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------EeeCC--CCcHHHHHHHH
Confidence 35999999999999999999999999999999964 44433 56777776665
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHH
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTI 799 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i 799 (950)
+++| +.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-.++
T Consensus 110 ~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 110 QKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp HHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTH
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCH
Confidence 5434 56899999999999999999999999 8999999999999987764443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.13 E-value=1e-10 Score=116.25 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=93.9
Q ss_pred CCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HcCCccCCceeeeCcccccCCHHHHhhh
Q 002230 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR--ECGILTDNGIAIEGPEFREKSDEELSKL 723 (950)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~--~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 723 (950)
..+...++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 28 ~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----------------------- 76 (168)
T 3ewi_A 28 SGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----------------------- 76 (168)
T ss_dssp CSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----------------------
T ss_pred cCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----------------------
Confidence 344567788888877 3899999999999999999 67788888 56652
Q ss_pred hccccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
++. .+.+|...++.+.+++| +.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-.+++
T Consensus 77 -----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 77 -----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp -----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHH
T ss_pred -----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHH
Confidence 221 23578888888877645 57899999999999999999999999 89999999999999876655533
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-10 Score=119.20 Aligned_cols=123 Identities=16% Similarity=0.126 Sum_probs=97.2
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec--ChhhHHHHHHHH
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS--SPMDKHTLVKHL 745 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~--~P~~K~~~V~~l 745 (950)
+++.|+++|+++.++||++...+..+++.+|+.. ++... .|+-...+++.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------~~~~~kpk~~~~~~~~~~~ 106 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------YYKGQVDKRSAYQHLKKTL 106 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE---------------------------EECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc---------------------------ceeCCCChHHHHHHHHHHh
Confidence 4999999999999999999999999999999964 34333 344444555554
Q ss_pred hhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC----hhHHHHHHHHHHHHHHHHHHHHHH
Q 002230 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQKFVQF 819 (950)
Q Consensus 746 ~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~----~~~i~~~i~~gR~~~~~i~k~i~~ 819 (950)
+-. .+.++|+||+.||++|++.|+++++|+ ++.+..++.||+++.+++ +..+.+.+...|..|.++.+.+.+
T Consensus 107 ~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 107 GLN-DDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp TCC-GGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCC-HHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 433 457899999999999999999999999 888999999999998877 444555566677777776665544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=116.01 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=88.2
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhh
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (950)
+++.|+++|+++.++||++...+..+++.+|+. ++... ..|...++.+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------~~~~~--~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------VLHGI--DRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC----------------------------EEESC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe----------------------------eEeCC--CChHHHHHHHHH
Confidence 899999999999999999999999999999984 22222 567777777666
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 748 ~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
++| +.++|+||+.||++|++.|+++++|+ ++.+..++.||+++.+++..+++..
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~ 153 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIRE 153 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHH
Confidence 544 56899999999999999999999999 7889999999999998886665543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.07 E-value=3e-10 Score=117.42 Aligned_cols=98 Identities=21% Similarity=0.248 Sum_probs=85.7
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhh
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (950)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...++.+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------~f~~~--k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------LYQGQ--SDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch---------------------------hhccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 45444 677888877765
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC
Q 002230 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (950)
Q Consensus 748 ~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~ 795 (950)
++| +.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCT
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCC
Confidence 534 57899999999999999999999999 788889999999998764
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.3e-10 Score=112.05 Aligned_cols=101 Identities=21% Similarity=0.260 Sum_probs=84.8
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhh
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (950)
+++.|+++|+++.++||++...+..+++++|+.. ++... ..|...++.+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~~~~~--kpk~~~~~~~~~ 89 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------LFQGV--VDKLSAAEELCN 89 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE---------------------------eeccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 33333 446666555544
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH
Q 002230 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (950)
Q Consensus 748 ~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~ 798 (950)
+.| +.++|+||+.||.+|++.|+++++++ ++.+..++.||+++.+++..+
T Consensus 90 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 90 ELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTT
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCc
Confidence 434 57899999999999999999999998 889999999999999888444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-09 Score=115.93 Aligned_cols=69 Identities=32% Similarity=0.453 Sum_probs=60.5
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++.++|++
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 196 IDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 478888888776655 46889999999999999999999999 8999999999999998888889888753
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=4.1e-09 Score=114.37 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=61.2
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
..|...++.+.+++| +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 568888888877756 46889999999999999999999999 9999999999999988888889888753
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.9e-09 Score=116.24 Aligned_cols=68 Identities=26% Similarity=0.397 Sum_probs=50.1
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++.++|+
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 459988888887756 46889999999999999999999999 899999999999998888888888764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.88 E-value=6.8e-09 Score=110.66 Aligned_cols=68 Identities=29% Similarity=0.279 Sum_probs=58.6
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++.++++
T Consensus 182 ~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 182 GSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 357777777766545 46889999999999999999999999 899999999999998888889988875
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=5.7e-09 Score=113.14 Aligned_cols=145 Identities=22% Similarity=0.284 Sum_probs=102.6
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee---eCccc-------------------
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI---EGPEF------------------- 712 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~vi---~g~~~------------------- 712 (950)
..+.+.+.++++++++.|++++++||++...+..+.+++|+... ++..+ .|+.+
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 45778899999999999999999999999999999999998521 11000 00000
Q ss_pred ---------------------------------------cc-------------CCHHHHh-------hhhc-cccEE--
Q 002230 713 ---------------------------------------RE-------------KSDEELS-------KLIP-KIQVM-- 730 (950)
Q Consensus 713 ---------------------------------------~~-------------~~~~~~~-------~~~~-~~~v~-- 730 (950)
.. .+++.+. +.+. .+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00 0111111 1111 11111
Q ss_pred ----eecC--hhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE--EeccCChhHH
Q 002230 731 ----ARSS--PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTI 799 (950)
Q Consensus 731 ----ar~~--P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi--vl~~~~~~~i 799 (950)
.... ...|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+ ++.+++-.++
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 1122 2569999998887766 46899999999999999999999999 999999999984 6677778888
Q ss_pred HHHHH
Q 002230 800 VTVAK 804 (950)
Q Consensus 800 ~~~i~ 804 (950)
.++|+
T Consensus 276 a~~i~ 280 (285)
T 3pgv_A 276 PRYLR 280 (285)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=2.6e-09 Score=110.07 Aligned_cols=136 Identities=18% Similarity=0.124 Sum_probs=97.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEe-ecChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA-RSSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a-r~~P~~ 737 (950)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++...+- . ....+.. -.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~----------~-~~~~~~~~~~~~k~ 142 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND----------A-LNGLVTGHMMFSHS 142 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT----------E-EEEEEEESCCSTTH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC----------E-EEeeeccCCCCCCC
Confidence 458899999999999999999999999999999999999986421111110000 0 0000000 012456
Q ss_pred HHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHH
Q 002230 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (950)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR 807 (950)
|...++.+.+++| +.++++||+.||++|++.|+++++| ++.+..++.||+++.++++..+..++.|-.
T Consensus 143 k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 143 KGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp HHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred hHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 6777766655434 5688999999999999999999999 677888999999999999999998877643
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.4e-09 Score=120.57 Aligned_cols=135 Identities=20% Similarity=0.277 Sum_probs=107.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhhccccEEee-----
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR----- 732 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~ar----- 732 (950)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..--. ..+.+. .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg-----------------~~tg~~~~~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG-----------------TLTGRVVGPI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT-----------------EEEEEECSSC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC-----------------EEEeeEccCC
Confidence 789999999999999999999999999999999999999953100 000000 01111
Q ss_pred cChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSV 809 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~ 809 (950)
..+..|..+++.+.+++| +.++|+||+.||.+|++.|++|+++ ++.+..++.||+++..+++..+..++.++|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 225678888777666545 5688999999999999999999999 57788899999999999999999999888876
Q ss_pred HHHH
Q 002230 810 YINI 813 (950)
Q Consensus 810 ~~~i 813 (950)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.83 E-value=1e-08 Score=111.02 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=61.1
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.++.++|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 569999998887766 46889999999999999999999999 999999999999999888889988875
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=7.8e-09 Score=110.73 Aligned_cols=69 Identities=29% Similarity=0.358 Sum_probs=61.8
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-.++.+++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 578888888887766 46889999999999999999999999 9999999999999999999999988753
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=1.5e-08 Score=108.80 Aligned_cols=69 Identities=28% Similarity=0.307 Sum_probs=60.3
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 568888887776645 56889999999999999999999999 8999999999999998888899988753
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=9.4e-09 Score=105.01 Aligned_cols=127 Identities=20% Similarity=0.313 Sum_probs=90.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhhccccEEee-cChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~ 736 (950)
++.|++.++++.|++.|+++.++||+....+..+.+.+|+... +........+ ...+... ..+.
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 142 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL-------------TGDVEGEVLKEN 142 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE-------------EEEEECSSCSTT
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEE-------------cCCcccCccCCc
Confidence 5678999999999999999999999999888888899887421 0000000000 0001001 2245
Q ss_pred hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHH
Q 002230 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
.|...+..+.+++| +.++++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 143 ~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 143 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 77777766655435 45899999999999999999999997 45666888999998777777654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.3e-08 Score=103.24 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=86.6
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+++.|+++|+++.++||++...+..+++.+|+.. ++... ..|...++.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------~~~~~--kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------LYQGQ--SNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------eecCC--CCCHHHHHHHH
Confidence 48999999999999999999999999999999863 33332 34555555554
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHH-HHHH
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TVAK 804 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~-~~i~ 804 (950)
+++| +.++|+||+.||.+|++.|+++++++ ++.+..++.||+++.+.+-.+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4435 57899999999999999999999998 77777888999999887656655 4443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.4e-08 Score=102.68 Aligned_cols=145 Identities=20% Similarity=0.230 Sum_probs=102.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee-Ccccc-------------------
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEFR------------------- 713 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~-~vi~-g~~~~------------------- 713 (950)
..+.+.+.+++++++++|++++++||+....+..+.+.+|+... ++ .+.. |+.+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 35678899999999999999999999999999999999987531 11 1111 21100
Q ss_pred --------------------cCCHHHHhhhhc----cccEE-----eec--ChhhHHHHHHHHhhhCC---CEEEEEcCC
Q 002230 714 --------------------EKSDEELSKLIP----KIQVM-----ARS--SPMDKHTLVKHLRTTLG---EVVAVTGDG 759 (950)
Q Consensus 714 --------------------~~~~~~~~~~~~----~~~v~-----ar~--~P~~K~~~V~~l~~~~g---~~v~~vGDG 759 (950)
....+...+++. .+.+. ... ....|...++.+.+++| +.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 001222222211 12222 111 23578888888766544 468899999
Q ss_pred ccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 760 ~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.||.+|++.|++|++|+ ++.+..++.||+++.+.+-.++.++++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999 788888899999998777777887764
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-08 Score=110.88 Aligned_cols=69 Identities=22% Similarity=0.251 Sum_probs=61.4
Q ss_pred hhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++.++|+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 3679988888877756 46899999999999999999999999 999999999999999888888988875
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.73 E-value=1e-08 Score=112.86 Aligned_cols=130 Identities=17% Similarity=0.284 Sum_probs=96.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcccccCCHHHHhhhhccccEEe-ecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMA-RSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi--~g~~~~~~~~~~~~~~~~~~~v~a-r~~P~ 736 (950)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..--..++ .+..+.. .+.. -..+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg-------------~i~~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD-------------NITLPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE-------------EECSSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee-------------eEecccCCCC
Confidence 488999999999999999999999999999999999999853111111 0100000 0000 01345
Q ss_pred hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.|...++.+.++.| +.++|+||+.||++|++.|++|++++ +.+..++.||.++..+++..+..+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 66666666554434 56899999999999999999999994 67778889999999889998887654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.69 E-value=5e-08 Score=95.99 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=86.8
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+.+++.++++.|++.|+++.++||.+...+..+.+.+|+.. .|....| |..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~~~~~kp--~~~ 87 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------------------------IYTGSYK--KLE 87 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------EEECC----CHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------hccCCCC--CHH
Confidence 45778999999999999999999999999999999999863 3333223 334
Q ss_pred HHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 741 ~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
.++.+.+..| +.++++||+.||.+|.+.|+++++++ ++.+..++.||+++.+.+-.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 4433322223 56899999999999999999999998 77888888999999887766666
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.65 E-value=5.8e-08 Score=107.67 Aligned_cols=143 Identities=16% Similarity=0.243 Sum_probs=98.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-ccccc--CC-----------H--------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFRE--KS-----------D-------- 717 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g-~~~~~--~~-----------~-------- 717 (950)
++++++.+.++.|++ |+.+.++||++...+..+.+.+++.. .+... ..+.. .. +
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG---ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS---EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh---hhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 568999999999999 99999999999777777788887742 11111 00000 00 0
Q ss_pred HHHhhhhccc------cEE----eecChhhHHHHHHHHhhhCC--CEEEEEcCCccCHHhhhcC----CcceeecCCCcH
Q 002230 718 EELSKLIPKI------QVM----ARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEA----DIGLAMGIAGTE 781 (950)
Q Consensus 718 ~~~~~~~~~~------~v~----ar~~P~~K~~~V~~l~~~~g--~~v~~vGDG~ND~~al~~A----dvGiamg~~g~~ 781 (950)
+++ +.++++ ..+ --..+.+|...++.+... . ++|+++|||.||++|++.| ++|||| ++.+
T Consensus 179 ~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~-~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 179 ELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES-KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH-HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh-hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 111 111110 001 112356798888877644 2 4588999999999999999 999999 7889
Q ss_pred HHHhcCCEEeccCChhHHHHHHH----HHHHHH
Q 002230 782 VAKESADVIILDDNFSTIVTVAK----WGRSVY 810 (950)
Q Consensus 782 ~ak~~aDivl~~~~~~~i~~~i~----~gR~~~ 810 (950)
.+|+.||+++.+++..++.++++ .||..+
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred HHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 99999999999988888777654 455555
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-07 Score=101.13 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=58.8
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 478888888876544 46889999999999999999999999 888888999999998888888888775
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.62 E-value=2.5e-08 Score=100.95 Aligned_cols=118 Identities=27% Similarity=0.394 Sum_probs=90.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+..-...+. ....+ .-....|..|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~k 141 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKF----------------QGIRLRFRDK 141 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEE----------------EEEECCSSCH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCce----------------ECCcCCccCH
Confidence 7899999999999999999999999998888888 8888753200000 11000 0134566889
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
...++.+ . .+.++++||+.||.+|++.|++|++|+ ++.+ .||+++.+ +..+.++++
T Consensus 142 ~~~l~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 142 GEFLKRF--R-DGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp HHHHGGG--T-TSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEESS--HHHHHHHHH
T ss_pred HHHHHhc--C-cCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEcc--HHHHHHHHH
Confidence 9998888 3 466888899999999999999999999 6655 79999854 777776653
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.61 E-value=7.9e-08 Score=100.28 Aligned_cols=129 Identities=26% Similarity=0.336 Sum_probs=94.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.++... .....|+--.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 167 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVE----------------RGKPHPDMAL 167 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSS----------------SCTTSSHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCC----------------CCCCCHHHHH
Confidence 467899999999999999999999999999999999999865433444433211 0112233334
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc---ceeecCCCcHHHHh-cCCEEeccCChhHHHHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKE-SADVIILDDNFSTIVTVAKWGR 807 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~~ak~-~aDivl~~~~~~~i~~~i~~gR 807 (950)
.+.+.+.-. .+.++++||+.||+.|++.|++ +++||.+..+..++ .||+++.+ +..+.++++.|+
T Consensus 168 ~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l~~~~ 236 (237)
T 4ex6_A 168 HVARGLGIP-PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS--FPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS--HHHHHHHHHHC-
T ss_pred HHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC--HHHHHHHHHccC
Confidence 444444433 3568999999999999999999 99998444344444 79999954 999988887654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.56 E-value=9.5e-08 Score=102.66 Aligned_cols=68 Identities=28% Similarity=0.318 Sum_probs=58.7
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 578888888776645 46889999999999999999999999 888888999999998877788888775
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=8.6e-08 Score=97.88 Aligned_cols=124 Identities=15% Similarity=0.084 Sum_probs=91.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..+++++. ....|
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-------------------~~~kp-- 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-------------------APPKP-- 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-------------------SCCTT--
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-------------------CCCCC--
Confidence 35689999999999999999999999999999999999985421 12222111 01111
Q ss_pred HHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCc-ceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHH
Q 002230 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (950)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~Adv-Giamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR 807 (950)
|...++.+.+++| +.++++||+.||..|.+.|++ +|+|+ ++.+..++.||+++.+ +..+...++-.|
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~--~~el~~~~~~~~ 199 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARD--CAQLRDLLSAEG 199 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSS--HHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCC--HHHHHHHHHhcc
Confidence 2223333333324 568999999999999999999 99999 7776678889999954 888888776543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.52 E-value=9.6e-08 Score=100.69 Aligned_cols=137 Identities=14% Similarity=0.191 Sum_probs=93.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCccCCce-ee-eCccc------c--cC-------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNGI-AI-EGPEF------R--EK------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~-gi~~~~~~-vi-~g~~~------~--~~------------- 715 (950)
.+.+.+.++|++|++.| +++++||+....+..+.+++ +++..++. +. +|+.. . .+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 56788999999999999 99999999999998887664 12222221 11 22220 0 00
Q ss_pred ------------------------CHH---HHhhhh---ccccEE-----eecCh--hhHHHHHHHHhhhCCCEEEEEcC
Q 002230 716 ------------------------SDE---ELSKLI---PKIQVM-----ARSSP--MDKHTLVKHLRTTLGEVVAVTGD 758 (950)
Q Consensus 716 ------------------------~~~---~~~~~~---~~~~v~-----ar~~P--~~K~~~V~~l~~~~g~~v~~vGD 758 (950)
.++ ++.+.+ +.+.+. ....| .+|...++.|.+++| |+++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g--via~GD 179 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP--AIIAGD 179 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC--EEEEES
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC--eEEEeC
Confidence 001 011111 112221 11223 489999999998877 888999
Q ss_pred CccCHHhhhcC--CcceeecCCCcHHHHhcCCEEecc-CChhHHHHHHH
Q 002230 759 GTNDAPALHEA--DIGLAMGIAGTEVAKESADVIILD-DNFSTIVTVAK 804 (950)
Q Consensus 759 G~ND~~al~~A--dvGiamg~~g~~~ak~~aDivl~~-~~~~~i~~~i~ 804 (950)
+.||.+||+.| ++||||| ++ ++.||+++.+ ++-.++.++|+
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 99999999999 9999999 66 6789999877 66677777664
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.50 E-value=6.1e-07 Score=97.96 Aligned_cols=68 Identities=25% Similarity=0.301 Sum_probs=59.0
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEec-cCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL-DDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~-~~~~~~i~~~i~ 804 (950)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++. +++-.++.++|+
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 478888888876655 46889999999999999999999999 888888999999998 888888888775
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=4.2e-07 Score=96.00 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=58.1
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhc-------CCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES-------ADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~-------aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..++. ||++..+++-.++.++++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 478888888877655 46889999999999999999999999 888888885 889998887888888775
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.7e-07 Score=92.61 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=89.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+....... .. ......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF-----------KE-LDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE-----------EE-EECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce-----------ec-cCCCCCCcc
Confidence 7899999999999999999999999999999999999985311 0111111000 00 011233456
Q ss_pred hHHHHHHHH-hhhCCCEEEEEcCCccCHHhhhc----CCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 737 DKHTLVKHL-RTTLGEVVAVTGDGTNDAPALHE----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 737 ~K~~~V~~l-~~~~g~~v~~vGDG~ND~~al~~----AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.|...+..+ .-. .+.++|+||+.||.+|+++ +.++++|+ +..+..+..||+++.+ +..+.+++
T Consensus 151 ~~~~~l~~~~~~~-~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~--~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLI-DGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN--VAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGC-CSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS--HHHHHHHH
T ss_pred cHHHHHHHHhCCC-CCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC--HHHHHHhh
Confidence 677666655 333 5789999999999999975 45556666 5667788899999854 77776543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.45 E-value=9e-07 Score=90.28 Aligned_cols=127 Identities=18% Similarity=0.114 Sum_probs=93.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...- ..++.+.+.. ....-...|..|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------~~~~~~p~p~~~ 134 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR-------------VVGYQLRQKDPK 134 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC-------------EEEEECCSSSHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCce-------------EEeeecCCCchH
Confidence 5789999999999999 999999999999999999999986421 1122221100 000012578899
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
...++.+... .+.++|+||+.||++|.+.|+++++++ ...+..+.+++++. -+++..+.+++
T Consensus 135 ~~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l 196 (206)
T 1rku_A 135 RQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPA-VHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCE-ECSHHHHHHHH
T ss_pred HHHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhcc-ccchHHHHHHH
Confidence 9999999877 788999999999999999999999985 44444334445542 35688887765
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.3e-06 Score=84.89 Aligned_cols=143 Identities=15% Similarity=0.240 Sum_probs=87.8
Q ss_pred CccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHH
Q 002230 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536 (950)
Q Consensus 457 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a 536 (950)
..||+|-|.++++.+...+.. ++ .+++..+.... ..+.||..+|+++++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~----------------~e--~elL~lAAs~E-------------~~SeHPla~AIv~~A 61 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGV----------------DE--KTLADAAQLAS-------------LADETPEGRSIVILA 61 (156)
T ss_dssp --------CEEEEEEEECTTS----------------CH--HHHHHHHHHTT-------------SSCCSHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCC----------------CH--HHHHHHHHHHh-------------CcCCCHHHHHHHHHH
Confidence 479999999999998764321 11 22232222221 126799999999999
Q ss_pred HHc-CCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHH
Q 002230 537 LLL-GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615 (950)
Q Consensus 537 ~~~-g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 615 (950)
.+. +........ ......||++..++.++.+ ++ +-+.+|++..|...+.. .|. .+.+ .+.+.
T Consensus 62 ~~~~~l~~~~~~~--~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~----~gi--~~~~----~~~~~ 124 (156)
T 1svj_A 62 KQRFNLRERDVQS--LHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGG--HFPT----DVDQK 124 (156)
T ss_dssp HHHTTCCCCCHHH--HTCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHH----HTC--CCCH----HHHHH
T ss_pred HHhcCCCcccccc--cccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHH----cCC--CCcH----HHHHH
Confidence 876 654321100 0134579999998888843 33 34678998777665532 121 1221 25677
Q ss_pred HHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc
Q 002230 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (950)
Q Consensus 616 ~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~ 663 (950)
++.++.+|.+++.+| .|..++|++++.|++||
T Consensus 125 ~~~la~~G~T~v~VA----------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 125 VDQVARQGATPLVVV----------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHTTCEEEEEE----------------ETTEEEEEEEEEECCCC
T ss_pred HHHHHhCCCCEEEEE----------------ECCEEEEEEEEecCCCC
Confidence 888999999999999 35789999999999997
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.9e-07 Score=94.09 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=90.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.++... ....|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDG--------------------KLSTK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------SSCSH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCC--------------------CCCCC
Confidence 3578999999999999999999999999999999999999864322232222110 11234
Q ss_pred HHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCc---ceeecCCCcH-H-HHhcCCEEeccCChhHHHHHHHH
Q 002230 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTE-V-AKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~-~-ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
...++.+.+++| +.++++||+.||+.|++.|++ +++|| ++.. . .+..||+++.+ +..+.+++..
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~s--~~el~~~~~~ 216 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVNS--VDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEESS--HHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEECC--HHHHHHHHHH
Confidence 444444433323 578999999999999999999 88888 4443 3 36889999954 8888887653
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=7.4e-07 Score=94.91 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=55.6
Q ss_pred hhHHHHHHHHhhhCC-----CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g-----~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 688999998887766 67999999999999999999999999 7777 4 6889988877777777664
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.6e-06 Score=93.91 Aligned_cols=67 Identities=33% Similarity=0.424 Sum_probs=57.6
Q ss_pred hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+|...++.+.+.+| +.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-.++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 57777777776655 46889999999999999999999999 888888999999998888888888775
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.39 E-value=6.4e-07 Score=96.00 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=58.2
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 478888888776544 46889999999999999999999999 888888899999998888888888764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=94.24 Aligned_cols=143 Identities=16% Similarity=0.118 Sum_probs=77.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCce-ee-eC--c-----c-c-ccCCHHHHhhh-
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNGI-AI-EG--P-----E-F-REKSDEELSKL- 723 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~-----~~~~-vi-~g--~-----~-~-~~~~~~~~~~~- 723 (950)
+-+.+.++|++|++.|++++++||+....+..+.+++|+.. .++. +. .+ + . . ..++.+...++
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 106 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVL 106 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHH
Confidence 44678999999999999999999999999999999998753 2332 22 22 1 0 0 11111110000
Q ss_pred ------------------------------------------------------------hc--cccEE-----eecCh-
Q 002230 724 ------------------------------------------------------------IP--KIQVM-----ARSSP- 735 (950)
Q Consensus 724 ------------------------------------------------------------~~--~~~v~-----ar~~P- 735 (950)
+. .+.+. ....|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~ 186 (275)
T 1xvi_A 107 NTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 186 (275)
T ss_dssp HHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEET
T ss_pred HHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecC
Confidence 00 00000 00111
Q ss_pred -hhHHHHHHHHhhhCC----CE--EEEEcCCccCHHhhhcCCcceeecCCCc---HHHHhc--CC-EEeccCChhHHHHH
Q 002230 736 -MDKHTLVKHLRTTLG----EV--VAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--AD-VIILDDNFSTIVTV 802 (950)
Q Consensus 736 -~~K~~~V~~l~~~~g----~~--v~~vGDG~ND~~al~~AdvGiamg~~g~---~~ak~~--aD-ivl~~~~~~~i~~~ 802 (950)
.+|...++.+.+.+| +. ++++||+.||.+|++.|++|++|| ++. +..++. || +++.+++-.++.++
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHH
Confidence 367777776655434 34 889999999999999999999999 776 445543 78 88877777788877
Q ss_pred HH
Q 002230 803 AK 804 (950)
Q Consensus 803 i~ 804 (950)
++
T Consensus 266 l~ 267 (275)
T 1xvi_A 266 LD 267 (275)
T ss_dssp --
T ss_pred HH
Confidence 64
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-06 Score=89.99 Aligned_cols=104 Identities=19% Similarity=0.154 Sum_probs=76.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhhccccEE-eecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVM-ARSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~~P~ 736 (950)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..- .........+. ..+. ..+.+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------g~~~~~~~~~~ 158 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYT-------------GRIEGTPSFRE 158 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEE-------------EEEESSCSSTH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEe-------------eeecCCCCcch
Confidence 4799999999999999999999999999999999999998521 00000000000 0011 112346
Q ss_pred hHHHHHHHHhhhCC------CEEEEEcCCccCHHhhhcCCcceeec
Q 002230 737 DKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 737 ~K~~~V~~l~~~~g------~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
.|...++.+.+..| +.+.++||+.||.+|++.|++++++.
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 78777776655435 67999999999999999999999985
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.33 E-value=6.8e-07 Score=92.53 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=89.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+.. . ...|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~--~kp~~ 150 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS------------------Y--GKPDP 150 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS------------------C--CTTST
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC------------------C--CCCCh
Confidence 457899999999999999999999999999999999999865322333332211 1 11223
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCc---ceeecCCCcHHHHhc-CCEEeccCChhHHHHHHHH
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKES-ADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~~ak~~-aDivl~~~~~~~i~~~i~~ 805 (950)
..++.+.+++| +.++++||+.||..|++.|++ ++++|.+..+..++. ||+++.+ +..+.++++.
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~--~~el~~~l~~ 221 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED--PLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS--HHHHHHTGGG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC--HHHHHHHHHH
Confidence 33333333324 568999999999999999999 777774555555554 9999854 8888887754
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.29 E-value=9.3e-07 Score=91.55 Aligned_cols=129 Identities=20% Similarity=0.283 Sum_probs=88.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCc-ccccCCHHHHhhhhccccEEee------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMAR------ 732 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~-~~~~~~~~~~~~~~~~~~v~ar------ 732 (950)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... .+... .+. ....+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~~~~~-----------~~~~~~~~~~~~~~ 152 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLKFY-----------FNGEYAGFDETQPT 152 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEEEC-----------TTSCEEEECTTSGG
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeeeEEEc-----------CCCcEecCCCCCcc
Confidence 67899999999999999999999999999999999999986310 11000 000 00001111
Q ss_pred cChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCcceeecCCC-cHHHHhcCCEEeccCChhHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~AdvGiamg~~g-~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
+.+..|...++.+.+++| +.++|+||+.||.+|.+.|+++|++|... .+.....+|+++.+ +..+.+++
T Consensus 153 ~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (225)
T 1nnl_A 153 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGEL 223 (225)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC--
T ss_pred cCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHHH
Confidence 123467777776655435 67899999999999999999988887322 23445678999854 76665543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-06 Score=89.21 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=84.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.... .....|.--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~~ 157 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP----------------YSKPHPQVYL 157 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS----------------CCTTSTHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccC----------------CCCCChHHHH
Confidence 456899999999999999999999999988888999998864322333322110 0011122333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee----cCCCcHHHHhcCCEEeccCChhHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam----g~~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
.+.+.+.-. .+.++++||+.||.+|++.|+++++| + ++.+..+..||+++.+ +..+..
T Consensus 158 ~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 158 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC--GGGCCH
T ss_pred HHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC--HHHHhH
Confidence 344444333 35688999999999999999999998 5 4444567889999854 555544
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.7e-06 Score=91.67 Aligned_cols=57 Identities=23% Similarity=0.183 Sum_probs=47.1
Q ss_pred hhHHHHHHHHhhhC----CCEEEEEcCCccCHHhhhcCCcceeecCCCc-HHHHhcCCEEecc
Q 002230 736 MDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIGLAMGIAGT-EVAKESADVIILD 793 (950)
Q Consensus 736 ~~K~~~V~~l~~~~----g~~v~~vGDG~ND~~al~~AdvGiamg~~g~-~~ak~~aDivl~~ 793 (950)
.+|...++.+.+.+ .+.|+++||+.||.+||+.|++|+||| ++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 46988888887652 357999999999999999999999999 777 6677788887643
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.25 E-value=9.1e-07 Score=95.76 Aligned_cols=132 Identities=18% Similarity=0.155 Sum_probs=90.9
Q ss_pred CCCccHHHHHHHHHHC-CCEEEEEcCC---------------------CHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 002230 660 PMRPGVKESVAICRSA-GITVRMVTGD---------------------NINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~a-Gi~v~m~TGD---------------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (950)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +.........
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~-- 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN---INRCNPLAGD-- 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---EEECCGGGTC--
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---EEEccccccC--
Confidence 4678999999999988 9999888876 34445555555565320 0000000000
Q ss_pred HHHhhhhccccEEeecC--hhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEec
Q 002230 718 EELSKLIPKIQVMARSS--PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792 (950)
Q Consensus 718 ~~~~~~~~~~~v~ar~~--P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~ 792 (950)
+....+.... ...|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.
T Consensus 197 -------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~ 268 (289)
T 3gyg_A 197 -------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITD 268 (289)
T ss_dssp -------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCS
T ss_pred -------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcC
Confidence 0000222222 2567777777766545 46899999999999999999999999 888888999999998
Q ss_pred cCChhHHHHHHH
Q 002230 793 DDNFSTIVTVAK 804 (950)
Q Consensus 793 ~~~~~~i~~~i~ 804 (950)
+++-.++.++++
T Consensus 269 ~~~~~gv~~~~~ 280 (289)
T 3gyg_A 269 SEYSKGITNTLK 280 (289)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCCcCHHHHHHH
Confidence 877778887765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.23 E-value=9.3e-07 Score=90.70 Aligned_cols=113 Identities=13% Similarity=0.067 Sum_probs=78.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--hh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~~ 737 (950)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+...-..++.+++. ....| +-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~~~~ 150 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEV------------------AASKPAPDI 150 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTS------------------SSCTTSSHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccC------------------CCCCCChHH
Confidence 45789999999999999999999998 4456677788875422233332221 11122 22
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~ 795 (950)
-..+.+.+.-. .+.++++||+.||.+|++.|+++++|+ ++.+..+ .||+++.+.+
T Consensus 151 ~~~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~ 205 (221)
T 2wf7_A 151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTS 205 (221)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGG
T ss_pred HHHHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHH
Confidence 23333333322 256889999999999999999999998 6666666 8999986543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.5e-06 Score=92.37 Aligned_cols=125 Identities=20% Similarity=0.234 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+...- ..++.++... .....|.--
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~ 166 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 166 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccC----------------CCCCCHHHH
Confidence 46789999999999999999999999998888888888764321 2222222110 011233333
Q ss_pred HHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCC---cceeecCCC------------------------cHHHHh-cCCE
Q 002230 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIAG------------------------TEVAKE-SADV 789 (950)
Q Consensus 739 ~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~Ad---vGiamg~~g------------------------~~~ak~-~aDi 789 (950)
..+.+.+.-. . +.++++||+.||.+|++.|+ +++++| ++ .+..++ .||+
T Consensus 167 ~~~~~~lgi~-~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 167 YKNAMELGVY-PMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHTCC-SGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHhCCC-CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4455555433 3 56899999999999999999 678787 44 233344 4999
Q ss_pred EeccCChhHHHHHHH
Q 002230 790 IILDDNFSTIVTVAK 804 (950)
Q Consensus 790 vl~~~~~~~i~~~i~ 804 (950)
++. ++..+..++.
T Consensus 245 v~~--~~~el~~~l~ 257 (267)
T 1swv_A 245 TIE--TMQELESVME 257 (267)
T ss_dssp EES--SGGGHHHHHH
T ss_pred ecc--CHHHHHHHHH
Confidence 984 4888887764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-06 Score=89.89 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=79.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+.|++.+.++.|++.|+++.++|+..........+.+|+...-..++.++.. ....| |..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~k~--~~~ 149 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDV------------------THHKP--DPE 149 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGC------------------SSCTT--STH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhc------------------CCCCC--ChH
Confidence 3689999999999999999999999999999888888875432222222211 11112 222
Q ss_pred HHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceee----cCCCcHHHHhc-CCEEeccCChhHHHHHH
Q 002230 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKES-ADVIILDDNFSTIVTVA 803 (950)
Q Consensus 741 ~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiam----g~~g~~~ak~~-aDivl~~~~~~~i~~~i 803 (950)
.++.+.+++| +.++++||+.||.+|++.|+++++| + +..+..+.. ||+++.+ +..+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 150 GLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECC--HHHHHHhh
Confidence 3333322223 4688899999999999999998887 4 333334444 8999854 66666555
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.9e-06 Score=87.98 Aligned_cols=114 Identities=15% Similarity=0.170 Sum_probs=75.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCC----------------CCCCChHHHH
Confidence 3689999999999999999999999754 778888999864333333332210 1112233334
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccC
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~ 794 (950)
.+.+.+.-. .+.++|+||+.||+.|.+.|+++++|. ++.+..+ .||+++.+.
T Consensus 154 ~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 154 TAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQT 205 (233)
T ss_dssp HHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSG
T ss_pred HHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCCh
Confidence 445555433 366889999999999999999999998 5555555 899999653
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.1e-06 Score=88.37 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=86.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.++... ....|.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 169 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDG--------------------TRVNKN 169 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------CCCCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccC--------------------CCCCCH
Confidence 468999999999999999999999999999999999999864322222221110 112344
Q ss_pred HHHHHHhhhCC----CEEEEEcCCccCHHhhhcCCc---ceeecCCCcHH--HHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV--AKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g----~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~~--ak~~aDivl~~~~~~~i~~~i 803 (950)
..++.+.+++| +.++++||+.||+.|.+.|++ ++++| .+... .+..+|+++.+ +..+.+++
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 44444433323 358899999999999999999 78777 44433 35789999965 77777654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.14 E-value=4.7e-06 Score=86.29 Aligned_cols=121 Identities=18% Similarity=0.207 Sum_probs=80.6
Q ss_pred CCccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 661 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 661 lr~~~~~~I~~l~~a-Gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+...-..++.+.+. .. .|..+.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-----------------~~--~~k~~~ 154 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDA-----------------LD--RNELPH 154 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTC-----------------SS--GGGHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCC-----------------cC--ccchHH
Confidence 578999999999999 9999999999999999999999986432222222221 00 121223
Q ss_pred HHHHHHhhhCC-----CEEEEEcCCccCHHhhhcCC---cceeecCCCcHH-HHh-cCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEV-AKE-SADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g-----~~v~~vGDG~ND~~al~~Ad---vGiamg~~g~~~-ak~-~aDivl~~~~~~~i~~~i 803 (950)
...+.+.+++| +.++++||+.||.+|.+.|+ +++++| .+... .+. .+|+++.+ +..+.+++
T Consensus 155 ~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 155 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 33333222223 46889999999999999999 566666 33333 222 38999854 55665554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.7e-06 Score=91.01 Aligned_cols=123 Identities=22% Similarity=0.296 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++... ....|.--.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 177 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 177 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC----------------CCcCHHHHH
Confidence 5678999999999999999999999999999999999998643333343332110 111233334
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-ec--CC-CcHHHHhcCCEEeccCChhHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MG--IA-GTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-mg--~~-g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
.+.+.+.-. .+.++++||+.||++|.+.|+++.. +. .+ +.+..+..+|+++.+ +..+.+
T Consensus 178 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 178 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred HHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 444555433 3568899999999999999998843 32 11 234456789999854 666544
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.7e-06 Score=87.91 Aligned_cols=125 Identities=10% Similarity=0.097 Sum_probs=87.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .....|.--.
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 159 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR----------------LFKPHQKVYE 159 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT----------------CCTTCHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc----------------cCCCChHHHH
Confidence 567899999999999999999999999999999999999864322333322211 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC---CCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~---~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+.-. .+.++++||+.||+.|.+.|+++++|-. +..+..+..+|+++.+ +..+..++
T Consensus 160 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 160 LAMDTLHLG-ESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred HHHHHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHHH
Confidence 333444322 3568899999999999999999999832 3344456789999855 77777654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.2e-06 Score=88.88 Aligned_cols=126 Identities=10% Similarity=0.076 Sum_probs=90.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .....|.--.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 162 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVR----------------LYKTAPAAYA 162 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTT----------------CCTTSHHHHT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccC----------------CCCcCHHHHH
Confidence 457899999999999999999999999999999999999864333333332211 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee----cCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam----g~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+.+.+.-. .+.++++||+.||+.|.+.|+++++| + +..+..+..+|+++.+ +..+.+++..
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~--~~el~~~l~~ 228 (233)
T 3umb_A 163 LAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHD--MRDLLQFVQA 228 (233)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESS--HHHHHHHHHC
T ss_pred HHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECC--HHHHHHHHHH
Confidence 344444333 35688999999999999999999999 5 4455556779999954 8888887754
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.11 E-value=8.8e-06 Score=84.16 Aligned_cols=124 Identities=19% Similarity=0.201 Sum_probs=88.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~----------------~~kp~~~~~~ 162 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE 162 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC----------------CCCcCHHHHH
Confidence 5678999999999999 9999999999999999999999864222222221110 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCc-cCHHhhhcCC---cceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~-ND~~al~~Ad---vGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+.+.+.-. .+.++++||+. ||..|.+.|+ +++++| ++.+..++.+|+++.+ +..+.++++
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESS--THHHHHHHH
T ss_pred HHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCC--HHHHHHHHH
Confidence 344444333 35689999997 9999999999 688888 6666667799999955 888887664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.11 E-value=2e-06 Score=87.43 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=86.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|+--.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 152 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFK----------------ESKPNPEIYL 152 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCS----------------SCTTSSHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeeccccc----------------CCCCChHHHH
Confidence 468899999999999999999999999999999999999865333333332211 0111233333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCC-cHHHHhcCCEEeccCChhHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g-~~~ak~~aDivl~~~~~~~i~~ 801 (950)
.+.+.+.-. .+.++++||+.||..|.+.|++++++..++ ....+..+|+++.+ +..+.+
T Consensus 153 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~~ 212 (214)
T 3e58_A 153 TALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVLD 212 (214)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGGG
T ss_pred HHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHHh
Confidence 444444433 356889999999999999999988886443 33345779999854 655543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=2.6e-06 Score=85.94 Aligned_cols=119 Identities=18% Similarity=0.198 Sum_probs=81.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
.+.|++.+.++.|++.|+++.++|+....... ..+.+|+...-..++.+.+.. .....|+--.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 147 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT 147 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCC----------------CCCCCcHHHH
Confidence 35789999999999999999999999988888 888888753211222221110 0011122223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.++-. .+.++++||+.||.+|++.|+++ ++|+ +|. . .||+++.+ +..+.+++
T Consensus 148 ~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECSS--TTHHHHHT
T ss_pred HHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeCC--HHHHHHHH
Confidence 444444433 35688999999999999999997 8888 665 2 68998854 66666544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.5e-06 Score=91.68 Aligned_cols=130 Identities=13% Similarity=0.051 Sum_probs=87.5
Q ss_pred CCCCccHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 659 DPMRPGVKESVAICRSAGI--TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi--~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-+.++.++..... .......|.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~------------~~~~Kp~~~ 208 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD------------TLVCKPHVK 208 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS------------SCCCTTSHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCc------------ccCCCcCHH
Confidence 3578999999999999999 99999999999999999999986543333333221100 001111222
Q ss_pred hHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCcceeecCCCcHH-----HHhcCCEEeccCChhHHHHHH
Q 002230 737 DKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 737 ~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~-----ak~~aDivl~~~~~~~i~~~i 803 (950)
--..+.+.+.-. . +.++++||+.||..|.+.|++|.+|+...... ....||+++.+ +..+.+++
T Consensus 209 ~~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 209 AFEKAMKESGLA-RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp HHHHHHHHHTCC-CGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred HHHHHHHHcCCC-CcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 222333333333 3 56899999999999999999999998443321 13378899854 77666544
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=98.09 E-value=5.7e-07 Score=57.96 Aligned_cols=25 Identities=60% Similarity=0.954 Sum_probs=23.1
Q ss_pred HHHHHHHhhhccccccccchhhhcc
Q 002230 21 ALQRWRKLCGFVKNRKRRFRFTANL 45 (950)
Q Consensus 21 ~~~~~~~~~~~~~~~~r~f~~~~~~ 45 (950)
+++|||+|+++|+||+||||++++|
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~~L 25 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMISNL 25 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHC
T ss_pred CchhHHHHHHHHhCccccccccccc
Confidence 4799999998999999999999987
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.08 E-value=4.1e-06 Score=87.65 Aligned_cols=138 Identities=14% Similarity=0.135 Sum_probs=90.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhh--hhccccEEeecChh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK--LIPKIQVMARSSPM 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~--~~~~~~v~ar~~P~ 736 (950)
-++.|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.++....- ..+.. .-|.-..+-+....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~--~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN--DYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS--SBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC--CceEEecCCCCccccccccCC
Confidence 3678999999999999999999999999988888887 76432 334433321100 00000 00000001111245
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhc--CCEEeccCChhHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~--aDivl~~~~~~~i~~~i~~ 805 (950)
+|..+++.+... .+.++|+||+.||+++.+.|++.++.+ ...+..+.. +|+++. ++..+.+++..
T Consensus 151 ~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 151 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred cHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 788888888766 678999999999999999999988643 112223333 777774 48888877653
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.08 E-value=4.8e-06 Score=86.15 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=86.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .....|+--.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 146 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG----------------EKKPSPTPVL 146 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC----------------TTCCTTHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC----------------CCCCChHHHH
Confidence 568999999999999999999999999999999999999864322333332211 1122344444
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecC-CCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~-~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+.+.+.-. .+.++++||+.||++|.+.|+++ |++.. .+.... ..+|+++.+ +..+.+++.
T Consensus 147 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 147 KTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred HHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 555555433 35688999999999999999987 55431 222222 668988854 888877654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.2e-06 Score=85.78 Aligned_cols=122 Identities=11% Similarity=0.131 Sum_probs=83.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~---~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
+.|++.+.++.|++.|+++.++|+.. ........+.+|+...-..++.+.+. ....|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp-- 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEV------------------LSYKP-- 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHH------------------TCCTT--
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheecccc------------------CCCCC--
Confidence 47999999999999999999999999 88888889999986422222222111 01122
Q ss_pred HHHHHHHHhhhCC---CEEEEEcCCc-cCHHhhhcCCcceeecC--CCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 738 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGI--AGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~vGDG~-ND~~al~~AdvGiamg~--~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
|....+.+.+++| +.++++||+. ||..|++.|+++++|-. +..+..+..+|+++. ++..+.+++.
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 2233333333324 5688999999 99999999999999921 333333455888874 4777776653
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.07 E-value=6.1e-06 Score=87.81 Aligned_cols=126 Identities=15% Similarity=0.061 Sum_probs=87.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC-CceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++... .....|.--
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~ 174 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV----------------RGRPFPDMA 174 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS----------------SCTTSSHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC----------------CCCCCHHHH
Confidence 5678999999999999999999999999999999998887543 22333332211 011122223
Q ss_pred HHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCC---cceeecCC-----------------------CcHH-HHhcCCEE
Q 002230 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIA-----------------------GTEV-AKESADVI 790 (950)
Q Consensus 739 ~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~Ad---vGiamg~~-----------------------g~~~-ak~~aDiv 790 (950)
..+.+.+.-. . +.++++||+.||+.|.+.|+ +++++|.+ ..+. ....+|++
T Consensus 175 ~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v 253 (277)
T 3iru_A 175 LKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYV 253 (277)
T ss_dssp HHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEE
Confidence 3444555444 4 66899999999999999999 56777732 1222 33459999
Q ss_pred eccCChhHHHHHHH
Q 002230 791 ILDDNFSTIVTVAK 804 (950)
Q Consensus 791 l~~~~~~~i~~~i~ 804 (950)
+.+ +..+.+++.
T Consensus 254 ~~~--~~el~~~l~ 265 (277)
T 3iru_A 254 IDS--VADLETVIT 265 (277)
T ss_dssp ESS--GGGTHHHHH
T ss_pred ecC--HHHHHHHHH
Confidence 954 888887764
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.05 E-value=8.4e-06 Score=86.71 Aligned_cols=140 Identities=24% Similarity=0.277 Sum_probs=88.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCH------HHHH-HHHHHcCC-ccC------------CceeeeCcccccCCHHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNI------NTAK-AIARECGI-LTD------------NGIAIEGPEFREKSDEEL 720 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~------~ta~-~ia~~~gi-~~~------------~~~vi~g~~~~~~~~~~~ 720 (950)
.++.+.+.++.+++.|+.+.+.|++.. .... ..-..+++ ... ...++.+++- ...++
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~ 162 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEE---EEKEV 162 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHH---HHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHH---HHHHH
Confidence 357789999999999999988888764 1111 11122332 000 0011111110 00112
Q ss_pred hhhhccccEEe--------ecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE
Q 002230 721 SKLIPKIQVMA--------RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789 (950)
Q Consensus 721 ~~~~~~~~v~a--------r~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi 789 (950)
.+.++.+.+.. ......|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+
T Consensus 163 ~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~ 241 (261)
T 2rbk_A 163 LPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADY 241 (261)
T ss_dssp GGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSE
T ss_pred HHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCE
Confidence 22233332211 1123578888887766545 46889999999999999999999999 888888999999
Q ss_pred EeccCChhHHHHHHH
Q 002230 790 IILDDNFSTIVTVAK 804 (950)
Q Consensus 790 vl~~~~~~~i~~~i~ 804 (950)
++.+.+-.++.++++
T Consensus 242 v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 242 VTAPIDEDGISKAMK 256 (261)
T ss_dssp ECCCGGGTHHHHHHH
T ss_pred EeccCchhhHHHHHH
Confidence 997766666887764
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.04 E-value=7.1e-06 Score=84.94 Aligned_cols=122 Identities=15% Similarity=0.127 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+.. .....|+--.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 166 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTG----------------TIKPSPEPVL 166 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSS----------------CCTTSSHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccC----------------CCCCChHHHH
Confidence 467899999999999999999999999999999999999864322333222110 0111223334
Q ss_pred HHHHHHhhhCCC-EEEEEcCCccCHHhhhcCCc-ceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGE-VVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~-~v~~vGDG~ND~~al~~Adv-Giamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+.+.+.-. .+ .++++||+.||+.|.+.|++ ++.++ ++.+ ..+|+++.+ +..+.+++.
T Consensus 167 ~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~--~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFKN--FYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEESS--HHHHHHHHH
T ss_pred HHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCC--HHHHHHHHH
Confidence 444555443 34 68899999999999999997 67776 5444 357888754 888877653
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.03 E-value=4.7e-06 Score=93.66 Aligned_cols=111 Identities=16% Similarity=0.179 Sum_probs=76.1
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc--CCceeeeCcccccCCHHHHhhhhccccEEee---
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (950)
...++|++++.|+.|+++|++|+++||.....++.+|+++|+.. +...|+ |..+....+ -.+..+
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg~~~~ 288 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILPKFDK 288 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEEEECT
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------CceeeeecC
Confidence 34578999999999999999999999999999999999998642 112222 222211000 001111
Q ss_pred ----cChhhHHHHHHHHhhh-CC-CEEEEEcCCccCHHhhhc-CCcceeecCC
Q 002230 733 ----SSPMDKHTLVKHLRTT-LG-EVVAVTGDGTNDAPALHE-ADIGLAMGIA 778 (950)
Q Consensus 733 ----~~P~~K~~~V~~l~~~-~g-~~v~~vGDG~ND~~al~~-AdvGiamg~~ 778 (950)
+..+.|...++.+... .| ..++++|||.||.+||++ +|.++.+.++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 2356799998876422 12 347778999999999986 6777666544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.00 E-value=8.9e-06 Score=81.02 Aligned_cols=120 Identities=16% Similarity=0.142 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcC--CccCCceeee----CcccccCCHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECG--ILTDNGIAIE----GPEFREKSDE 718 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~---------------~ta~~ia~~~g--i~~~~~~vi~----g~~~~~~~~~ 718 (950)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+| +.. ++. +.+
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~~~------- 95 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA----IFMCPHGPDD------- 95 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE----EEEECCCTTS-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEEcCCCCCC-------
Confidence 5789999999999999999999999985 56667777788 321 110 000
Q ss_pred HHhhhhccccEEeecCh--hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc---ceeecCCCcHHHH----hcCCE
Q 002230 719 ELSKLIPKIQVMARSSP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAK----ESADV 789 (950)
Q Consensus 719 ~~~~~~~~~~v~ar~~P--~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~~ak----~~aDi 789 (950)
-+....| +-=..+.+.+.-. .+.++|+||+.||..|.+.|++ ++++| .+.+... ..+|+
T Consensus 96 ----------~~~~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~ 163 (179)
T 3l8h_A 96 ----------GCACRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTR 163 (179)
T ss_dssp ----------CCSSSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEE
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcE
Confidence 0011122 2223334444333 3568999999999999999995 77777 4444333 45799
Q ss_pred EeccCChhHHHHHHH
Q 002230 790 IILDDNFSTIVTVAK 804 (950)
Q Consensus 790 vl~~~~~~~i~~~i~ 804 (950)
++.+ +..+.+++.
T Consensus 164 v~~~--l~el~~~l~ 176 (179)
T 3l8h_A 164 VCED--LAAVAEQLL 176 (179)
T ss_dssp EESS--HHHHHHHHH
T ss_pred EecC--HHHHHHHHH
Confidence 9865 888877653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1e-05 Score=84.44 Aligned_cols=124 Identities=10% Similarity=0.104 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK----------------IYKPDPRIYQ 168 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTT----------------CCTTSHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999864322333332211 0111222233
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc---eeecCCCcHHHHhcC-CEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGTEVAKESA-DVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG---iamg~~g~~~ak~~a-Divl~~~~~~~i~~~i 803 (950)
.+.+.+.-. .+.++++||+.||+.|.+.|++. +..| .+.+..+..+ |+++.+ +..+..++
T Consensus 169 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 169 FACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEESS--GGGHHHHH
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeCC--HHHHHHHH
Confidence 344444333 35688899999999999999954 4445 3233334557 998854 77777655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.99 E-value=5.4e-06 Score=85.95 Aligned_cols=125 Identities=9% Similarity=0.058 Sum_probs=86.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 158 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ----------------VYKPDNRVYE 158 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT----------------CCTTSHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999864323333332211 1112233333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCC---cHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g---~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+.-. .+.++++||+.||..|.+.|+++.++-..+ .+..+..+|+++.+ +..+..++
T Consensus 159 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 159 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 444444433 356888999999999999999998883222 23335668998854 77776654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.5e-05 Score=83.08 Aligned_cols=125 Identities=15% Similarity=0.124 Sum_probs=80.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+...- +.++.+.+.. .....|.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~----------------~~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK----------------YGKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS----------------SCTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC----------------CCCCCCH
Confidence 35679999999999999999999999988877777777 876432 2333332211 1112233
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcHH----HHhcCCEEeccCChhHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV----AKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~~----ak~~aDivl~~~~~~~i~~~i~ 804 (950)
--..+.+.+.-. .+.++++||+.||+.|.+.|+++ +.+. +|... .+..||+++.+ +..+.+++.
T Consensus 170 ~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 333444444433 35688999999999999999965 3333 33221 23479999855 888777664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.92 E-value=3.8e-06 Score=88.32 Aligned_cols=119 Identities=14% Similarity=0.170 Sum_probs=78.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCc--ccccCCHHHHhhhhccccEEeecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
++.|++.+.++.|++.|+++.++|+.....+.....+ .|+...-..++.++ +. ....|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~------------------~~~Kp- 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEV------------------QHGKP- 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTC------------------CSCTT-
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhc------------------cCCCC-
Confidence 5688999999999999999999999987665543322 34432212222222 11 11122
Q ss_pred hHHHHHHHHhhhCC-----CEEEEEcCCccCHHhhhcCC---cceeecCCCcHHHHhcCCEEeccCChhHHHH
Q 002230 737 DKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 737 ~K~~~V~~l~~~~g-----~~v~~vGDG~ND~~al~~Ad---vGiamg~~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
|..+++.+.+++| +.++++||+.||+.|.+.|+ +++++| ++.+..+..||+++.+ +..+..
T Consensus 173 -~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s--l~el~~ 241 (250)
T 3l5k_A 173 -DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS--LQDFQP 241 (250)
T ss_dssp -STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC--GGGCCG
T ss_pred -ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC--HHHhhH
Confidence 2233333333334 67899999999999999999 677777 5566678899999854 655543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.5e-05 Score=78.89 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=83.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|.-=.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEG----------------VKKPHPKIFK 157 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTCHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCC----------------CCCCCHHHHH
Confidence 467899999999999999999999999998999999999864322333322211 0111122212
Q ss_pred HHHHHHhhhCCCEEEEEcCCc-cCHHhhhcCCcceee---cCCCcHHHH---hcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAK---ESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~-ND~~al~~AdvGiam---g~~g~~~ak---~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+.-. .+.++++||+. ||..|.+.|+++.+. | .+..... ..+|+++.+ +..+..++
T Consensus 158 ~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~--~~el~~~l 224 (241)
T 2hoq_A 158 KALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDN--LESLLEVL 224 (241)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESS--TTHHHHHH
T ss_pred HHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECC--HHHHHHHH
Confidence 333333322 35688999998 999999999987554 4 3333333 268999854 77777655
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=83.65 Aligned_cols=124 Identities=17% Similarity=0.162 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
++.|++.+.++.|++.|+++.++|+.....+....+. |+...- +.++.+++.. .....|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~----------------~~kp~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK----------------YGKPNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS----------------SCTTSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC----------------CCCCChHH
Confidence 5679999999999999999999999987777777777 876432 3344443211 01112222
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcHH----HHhcCCEEeccCChhHHHHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV----AKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~~----ak~~aDivl~~~~~~~i~~~i~ 804 (950)
-..+.+.+.-. .+.++++||+.||+.|.+.|+++ +.++ +|... .+..||+++.+ +..+.++++
T Consensus 172 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred HHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 23333333322 25688999999999999999985 4444 44322 33469999854 888877654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.91 E-value=2.7e-05 Score=80.57 Aligned_cols=120 Identities=11% Similarity=0.064 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|+ .|+++.++|+.....+..+.+.+|+...-+.++.+++.. . ...|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~--~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG------------------V--LKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT------------------C--CTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC------------------C--CCCCH
Confidence 46789999999999 999999999999999999999999864322333322211 1 11223
Q ss_pred HHHHHHhhhCC---CEEEEEcCCc-cCHHhhhcCCcceeecCCCcH-HHHhcCCEEeccCChhHHHHH
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTE-VAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~-ND~~al~~AdvGiamg~~g~~-~ak~~aDivl~~~~~~~i~~~ 802 (950)
..++.+.+++| +.++++||+. ||..|.+.|+++++|...+.. ..+..+|+++.+ +..+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 33333333324 5789999995 999999999999999855442 456679999955 7766654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.90 E-value=8.5e-06 Score=86.14 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=84.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+++.. ......|+--
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~---------------~~~Kp~~~~~ 174 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG---------------GRGKPHPDLY 174 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT---------------TCCTTSSHHH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC---------------cCCCCChHHH
Confidence 4568999999999999999999999999999999999998531111 22221110 0111112222
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCC-------c-HHHHhcCCEEeccCChhHHHHHHHH
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAG-------T-EVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g-------~-~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
..+.+.+.-. .+.++++||+.||+.|.+.|+++ +.+. .| . +..+..+|+++.+ +..+.+++..
T Consensus 175 ~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~--l~el~~~l~~ 246 (259)
T 4eek_A 175 TFAAQQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTS--HAELRAALAE 246 (259)
T ss_dssp HHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECS--HHHHHHHHHH
T ss_pred HHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCC--HHHHHHHHHh
Confidence 2333333322 25689999999999999999998 4443 33 2 2334559999955 8888887753
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.86 E-value=4.5e-05 Score=78.90 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=85.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++. +++.++|+.....+....+.+|+...-..++.+.+.. .. ..|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~--kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG------------------FQ--KPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT------------------SC--TTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC------------------CC--CCCh
Confidence 5678999999999999 9999999999999999999999864322333222211 11 1223
Q ss_pred HHHHHHhhhCC----CEEEEEcCCc-cCHHhhhcCCcceeecCCC--cHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIGLAMGIAG--TEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g----~~v~~vGDG~-ND~~al~~AdvGiamg~~g--~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
..++.+.+++| +.++++||+. ||+.|.+.|+++..+-..| .+..+..+|+++.+ +..+.+++.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 33443333335 5689999998 9999999999954332243 44566789999955 888887764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=3.3e-05 Score=79.41 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~---------------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.- ...+..+........+ .
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-~~~~~~~~~~~~~~~~-----~ 123 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL-DGIYYCPHHPQGSVEE-----F 123 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC-SEEEEECCBTTCSSGG-----G
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce-EEEEECCcCCCCcccc-----c
Confidence 678999999999999999999999999 467788888888851 1122221110000000 0
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc----ceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI----GLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv----Giamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
..........|.--..+.+.+.-. .+.++|+||+.||+.+.+.|++ ++..|....+.....+|+++.+ +..+.
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~--l~el~ 200 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLP 200 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCC--HHHHH
Confidence 000011112233333344444333 3568899999999999999995 4444422233344568999854 88887
Q ss_pred HHHH
Q 002230 801 TVAK 804 (950)
Q Consensus 801 ~~i~ 804 (950)
+++.
T Consensus 201 ~~l~ 204 (211)
T 2gmw_A 201 QAIK 204 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.8e-05 Score=81.31 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=81.4
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. .-..++.+++.. .....|+-=..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~----------------~~Kp~p~~~~~ 173 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGI----------------RRKPAPDMTSE 173 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTS----------------CCTTSSHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCC----------------CCCCCHHHHHH
Confidence 5689999999999999999999999988888899999975 323333332210 01111221123
Q ss_pred HHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc---eeecCCCc-HHH-HhcCCEEeccCChhHHHHHH
Q 002230 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGT-EVA-KESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 741 ~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG---iamg~~g~-~~a-k~~aDivl~~~~~~~i~~~i 803 (950)
+.+.+.-. .+.++|+||+.||+.|.+.|++. +++| .+. +.. +..+|+++.+ +..+...+
T Consensus 174 ~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 174 CVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp HHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred HHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 33333322 35689999999999999999994 5555 333 333 3468998854 77776554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.80 E-value=3.5e-05 Score=79.22 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=81.7
Q ss_pred CCCccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aG-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.+.++.|++.| +++.++|+........+.+.+|+...-.. +++...| |
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~-----------------------~~~~~kp--k 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH-----------------------IEVMSDK--T 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE-----------------------EEEESCC--S
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe-----------------------eeecCCC--C
Confidence 46789999999999999 99999999999888999999998542111 3333333 4
Q ss_pred HHHHHHHhhhCC---CEEEEEcCCc-cCHHhhhcCCcceeecC------CCcHHHHhc-CCEEeccCChhHHHHHH
Q 002230 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGI------AGTEVAKES-ADVIILDDNFSTIVTVA 803 (950)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~vGDG~-ND~~al~~AdvGiamg~------~g~~~ak~~-aDivl~~~~~~~i~~~i 803 (950)
...++.+.+++| +.++++||+. ||..|.+.|+++.++=. ++.+..+.. +|+++.+ +..+.+++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHHHHHhc
Confidence 444544443334 5688999996 99999999999888721 222222333 4888854 77777643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.77 E-value=3.9e-05 Score=80.87 Aligned_cols=124 Identities=12% Similarity=0.119 Sum_probs=85.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 154 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR----------------VFKPHPDSYA 154 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTSHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC----------------CCCCCHHHHH
Confidence 57799999999999 99999999999999999999999864322333322211 0112222333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCC-----------------------C---cHHHHhcCCEEecc
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA-----------------------G---TEVAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~-----------------------g---~~~ak~~aDivl~~ 793 (950)
.+.+.+.-. .+.++++||+.||+.|.+.|+++.++... + .+..+..+|+++.+
T Consensus 155 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (253)
T 1qq5_A 155 LVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (253)
T ss_dssp HHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC
Confidence 344444322 25688899999999999999999988733 1 12234568998854
Q ss_pred CChhHHHHHHH
Q 002230 794 DNFSTIVTVAK 804 (950)
Q Consensus 794 ~~~~~i~~~i~ 804 (950)
+..+.+++.
T Consensus 234 --~~el~~~l~ 242 (253)
T 1qq5_A 234 --LGDLPRLVR 242 (253)
T ss_dssp --GGGHHHHHH
T ss_pred --HHHHHHHHH
Confidence 888877653
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=3.9e-05 Score=78.41 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+...-..+ +.+...+..|.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i----------------------~~~~~~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGI----------------------YGSSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEE----------------------EEECSSCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeee----------------------ecCCCCCCCCh
Confidence 467999999999999 9999999999988888888999986421111 11111223445
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCc---ceeecCCC-cHHHH-hcCCEEeccCChhHHHHH
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAG-TEVAK-ESADVIILDDNFSTIVTV 802 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~Adv---Giamg~~g-~~~ak-~~aDivl~~~~~~~i~~~ 802 (950)
.+.+.+.+++| +.++++||+.||+.|.++|++ ++++| .+ .+..+ ..+|+++.+ +..+..+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~~--~~el~~~ 208 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 55555444435 468999999999999999999 77777 44 33333 468999854 6666543
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.75 E-value=5.8e-06 Score=84.23 Aligned_cols=119 Identities=13% Similarity=0.215 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC--hhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS--PMD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~--P~~ 737 (950)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-..++.+.+. .... |+-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~KP~~~~ 143 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDT------------------PKRKPDPLP 143 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGS------------------SCCTTSSHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcC------------------CCCCCCcHH
Confidence 4688999999999999 999999999999899999988875321122222211 1112 222
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC--C-CcHHHHhcCCEEeccCChhHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI--A-GTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~--~-g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
-..+.+.+.-. .+.++++||+.||.+|.+.|+++++|.. . ..+..++ +|+++.+ +..+.+
T Consensus 144 ~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~~ 206 (209)
T 2hdo_A 144 LLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDILE 206 (209)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGGG
T ss_pred HHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHHH
Confidence 23333443322 3568899999999999999999998742 1 2334444 9999854 555543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.74 E-value=4e-05 Score=77.57 Aligned_cols=121 Identities=13% Similarity=0.089 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...-..++.+.+.. .....|+--.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 135 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVK----------------EYKPSPKVYK 135 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTCHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcC----------------CCCCCHHHHH
Confidence 45789999 9999999 9999999999999999999999864322333332211 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC---CCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~---~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+. .+.++++||+.||..|.+.|+++.++-. ++.+..+..+|+++.+ +..+.+++
T Consensus 136 ~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 197 (201)
T 2w43_A 136 YFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWI 197 (201)
T ss_dssp HHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHH
T ss_pred HHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 3444443 2457889999999999999999977721 2223334568998854 77777655
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.74 E-value=2.9e-05 Score=79.88 Aligned_cols=121 Identities=10% Similarity=0.125 Sum_probs=78.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEe--ecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMA--RSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~~P~ 736 (950)
++.|++.+.++.++. ++.++|+........+.+.+|+...- ..++.++... .. ...|.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~----------------~~~~kpk~~ 147 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG----------------ADRVKPKPD 147 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC----------------TTCCTTSSH
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccc----------------cCCCCcCHH
Confidence 356788888887764 99999999999999999999986421 2222221100 00 01122
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcH-------HHHhc-CCEEeccCChhHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-------VAKES-ADVIILDDNFSTIVTVA 803 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~-------~ak~~-aDivl~~~~~~~i~~~i 803 (950)
--..+.+.+.-. .+.++++||+.||.+|++.|+++ ++++ ++.+ ..++. ||+++.+ +..+.+++
T Consensus 148 ~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 219 (229)
T 2fdr_A 148 IFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 219 (229)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HHHHHHHHcCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecC--HHHHHHHH
Confidence 223333333322 25688999999999999999998 6676 5543 25565 9999854 77776655
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.73 E-value=4.5e-05 Score=76.10 Aligned_cols=106 Identities=16% Similarity=0.074 Sum_probs=70.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-..++.+.+. .+..| |..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~------------------~~~kp--~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSG------------------FKRKP--NPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGC------------------CCCTT--SCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeecccc------------------CCCCC--CHH
Confidence 578999999999999999999999874 567778888875421222222211 11122 223
Q ss_pred HHHHHhhhCCC-EEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC
Q 002230 741 LVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (950)
Q Consensus 741 ~V~~l~~~~g~-~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD 788 (950)
.++.+.+++|- .++++||+.||.+|++.|++++++. +.....++..+
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 33333333242 6889999999999999999998887 44444454433
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.5e-05 Score=81.92 Aligned_cols=123 Identities=14% Similarity=0.103 Sum_probs=83.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.. ..++.++.. -.....|.--.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f--~~~~~~~~~----------------~~~kp~~~~~~ 180 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW--DMLLCADLF----------------GHYKPDPQVYL 180 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC--SEECCHHHH----------------TCCTTSHHHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc--ceEEeeccc----------------ccCCCCHHHHH
Confidence 4568999999999985 9999999999999999999999841 122221110 00111222222
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC----CCc---HH--HHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI----AGT---EV--AKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~----~g~---~~--ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+.+.+.-. .+.++++||+.||+.|.+.|+++++|.. .|. +. .+..+|+++.+ +..+.+++.
T Consensus 181 ~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~l~ 251 (254)
T 3umc_A 181 GACRLLDLP-PQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQLA 251 (254)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHHHH
T ss_pred HHHHHcCCC-hHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHHhc
Confidence 333333322 2568999999999999999999999984 232 11 26679999955 888887663
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.71 E-value=3.7e-05 Score=80.33 Aligned_cols=121 Identities=16% Similarity=0.202 Sum_probs=85.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ .++.++. +....| |.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~--~~~~~~~------------------~~~~kp--~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD--VIIGSDI------------------NRKYKP--DP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS--CCCCHHH------------------HTCCTT--SH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee--EEEEcCc------------------CCCCCC--CH
Confidence 5678999999999997 99999999999999999999998421 1111111 011222 23
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCC----CcH----H-HHhcCCEEeccCChhHHHHHHHH
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIA----GTE----V-AKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~----g~~----~-ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
..++.+.+++| +.++++||+.||+.|.+.|+++++|... |.. . .+..+|+++.+ +..+..++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~--~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD--ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS--HHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC--HHHHHHHhcC
Confidence 34444433334 5689999999999999999999999842 211 1 35678999955 8888887643
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.63 E-value=4.8e-05 Score=81.42 Aligned_cols=115 Identities=14% Similarity=0.063 Sum_probs=78.5
Q ss_pred CCccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 661 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 661 lr~~~~~~I~~l~~a-Gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+.. -..++.+++... ....|+--.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~~----------------~kp~~~~~~ 177 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVKQ----------------GKPHPEPYL 177 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCSS----------------CTTSSHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCCC----------------CCCChHHHH
Confidence 478999999999999 99999999999999999999998752 223333332110 011233333
Q ss_pred HHHHHHhh-------hCCCEEEEEcCCccCHHhhhcCCcceee---cCCCcHHHHhcCCEEecc
Q 002230 740 TLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~-------~~g~~v~~vGDG~ND~~al~~AdvGiam---g~~g~~~ak~~aDivl~~ 793 (950)
.+.+.+.- . .+.++++||+.||..|++.|+++++| |.+..+..+..||+++.+
T Consensus 178 ~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 178 KGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 44444443 3 34688999999999999999976655 523233333458998854
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.62 E-value=6.9e-05 Score=75.23 Aligned_cols=89 Identities=15% Similarity=0.121 Sum_probs=65.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+...-+. ++ ..+..|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~-----------------------~~--~~~~~k 122 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVH-----------------------RE--IYPGSK 122 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEE-----------------------EE--ESSSCH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcce-----------------------eE--EEeCch
Confidence 578999999999999999999999999 7899999999998642000 11 112234
Q ss_pred HHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce
Q 002230 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi 773 (950)
....+.+.+++| +.++++||+.||+.+.++|++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 123 ITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 333333322224 46889999999999999998854
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00015 Score=72.99 Aligned_cols=137 Identities=10% Similarity=0.058 Sum_probs=89.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
-++.||+.++++.|+++|+++.++|+... ..+..+.+.+|+...-+.++...+.... .-.....|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------~~~~KP~p 100 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQP------------GKMEKPDK 100 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSST------------TCCCTTSH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccc------------cCCCCcCH
Confidence 36889999999999999999999998776 8889999999986432223322221000 00111122
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCcceeecCCCcH-----HH-HhcCCEEeccCChhHHHHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMGIAGTE-----VA-KESADVIILDDNFSTIVTVAKWGRS 808 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvGiamg~~g~~-----~a-k~~aDivl~~~~~~~i~~~i~~gR~ 808 (950)
+--..+.+.+.-. .+.++||||+ .+|+.+-+.|++....-..+.. .. ...+|.++.+.++..+.+++...+.
T Consensus 101 ~~~~~~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~ 179 (189)
T 3ib6_A 101 TIFDFTLNALQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179 (189)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHH
Confidence 2333444444433 3568999999 7999999999986443212221 11 1268999986679999988876543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=4.6e-05 Score=80.97 Aligned_cols=124 Identities=10% Similarity=0.182 Sum_probs=84.9
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+.|++.++++.|++.|+++.++|+.... ...+.+.+|+...-..++.+.+.. .....|.--..
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~~ 169 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAG----------------WPKPDPRIFQE 169 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHS----------------SCTTSHHHHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccC----------------CCCCCHHHHHH
Confidence 5799999999999999999999997664 678888899864322222221110 11223333344
Q ss_pred HHHHHhhhCCCEEEEEcCCc-cCHHhhhcCCcceeecCCCcHH-----HHhcCCEEeccCChhHHHHHHH
Q 002230 741 LVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 741 ~V~~l~~~~g~~v~~vGDG~-ND~~al~~AdvGiamg~~g~~~-----ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+.+.+.-. .+.++|+||+. ||+.|.+.|+++.+|...+... ....+|+++.+ +..+.+++.
T Consensus 170 ~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 170 ALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp HHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred HHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 44444433 36689999997 9999999999999987444321 22368999854 888887764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.52 E-value=8.9e-05 Score=76.51 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=82.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++ |+++.++|+..........+.++-. -+.++.+.+.. .....|.-..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~--fd~i~~~~~~~----------------~~KP~~~~~~ 159 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE--FDHIITAQDVG----------------SYKPNPNNFT 159 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC--CSEEEEHHHHT----------------SCTTSHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc--cCEEEEccccC----------------CCCCCHHHHH
Confidence 678999999999999 8999999999988777776664421 11222222111 1122333333
Q ss_pred HHHHHHhhhCC---CEEEEEcCCc-cCHHhhhcCCcceeecCCC----------cHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG----------TEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~-ND~~al~~AdvGiamg~~g----------~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+++.+++. | +.++++||+. ||+.|.+.|+++++|...+ .+..+..+|+++.+ +..+.+++.
T Consensus 160 ~~l~~~~~l-gi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAKA-GIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHT-TCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHhc-CCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HHHHHHHHH
Confidence 453333322 3 5688999996 9999999999999995322 13345789999954 888877664
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00045 Score=72.36 Aligned_cols=118 Identities=14% Similarity=0.099 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--hh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~~ 737 (950)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+...-.. +++...| .-
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-----------------------i~~~~kp~~~~ 167 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR-----------------------IEVVSEKDPQT 167 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC-----------------------EEEESCCSHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce-----------------------eeeeCCCCHHH
Confidence 45799999999999 9999999999999888888888888542111 3333333 22
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCc-cCHHhhhcCCcceeecCCCcH--------HHHhcCCE-EeccCChhHHHHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTE--------VAKESADV-IILDDNFSTIVTVAK 804 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~-ND~~al~~AdvGiamg~~g~~--------~ak~~aDi-vl~~~~~~~i~~~i~ 804 (950)
-..+.+.+.-. .+.++++||+. ||..|.+.|++++++=..|.. .....+|+ ++. ++..+..++.
T Consensus 168 ~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 241 (251)
T 2pke_A 168 YARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHHH
T ss_pred HHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHHH
Confidence 23333444333 35688999999 999999999999776323321 11345787 774 4888777653
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00058 Score=69.59 Aligned_cols=124 Identities=19% Similarity=0.233 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+..--+.++.+++.. .....|+-=.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~----------------~~KP~p~~~~ 147 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVK----------------NGKPDPEIYL 147 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSS----------------SCTTSTHHHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccC----------------CCcccHHHHH
Confidence 357899999999999999999999999999999999999975333333332211 0112233223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc----eeecCCCcHHHHhc-CCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG----LAMGIAGTEVAKES-ADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG----iamg~~g~~~ak~~-aDivl~~~~~~~i~~~i 803 (950)
.+.+.+.-. .+.++||||..+|+.+-++|++. +.-|.+..+..+++ ++.+. + ...+.+.+
T Consensus 148 ~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 148 LVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 344444433 35688999999999999999974 33343333444444 45544 3 44555544
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00018 Score=72.36 Aligned_cols=102 Identities=9% Similarity=0.003 Sum_probs=70.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.| ++.++|+.+......+.+.+|+...-+.++.+.+. -.....|+--.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~----------------~~~Kp~~~~~~ 148 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSAL----------------GVMKPNPAMYR 148 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHH----------------SCCTTCHHHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeeccc----------------CCCCCCHHHHH
Confidence 36799999999999999 99999999999999999999986432222222110 01112233333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCC
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g 779 (950)
.+.+.+.-. .+.++++||+.||..|.+.|++...+-..+
T Consensus 149 ~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 149 LGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 344444333 356889999999999999999988775343
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=9.1e-05 Score=78.06 Aligned_cols=50 Identities=22% Similarity=0.271 Sum_probs=37.1
Q ss_pred hHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhcCC-cceeecCCCcHHHHhcCC
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESAD 788 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~Ad-vGiamg~~g~~~ak~~aD 788 (950)
+|...++.|.+. .+.++++|| |.||.+||+.|+ +|++|+ ++.|..|..++
T Consensus 187 ~Kg~al~~L~~~-~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVEDD-FEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTTT-CSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHH
T ss_pred CHHHHHHHHHcC-cccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHH
Confidence 455555554442 467899999 799999999996 899999 88887665443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00036 Score=74.10 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=36.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TG---D~~~ta~~ia~~~gi~~ 701 (950)
.+.+-|+++++|++++++|++++++|| +.........+++|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 444568899999999999999999999 67777777778888853
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.22 E-value=8.6e-05 Score=75.46 Aligned_cols=102 Identities=6% Similarity=-0.044 Sum_probs=68.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH------cCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE------CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~------~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...-..++.+.+.. ....
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~----------------~~Kp 151 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG----------------KYKP 151 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHT----------------CCTT
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccC----------------CCCC
Confidence 457899999999999 999999999998888877777 67643211222211100 0111
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCC
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g 779 (950)
.|+--..+.+.+.-. .+.++++||+.||..|.+.|+++.++...+
T Consensus 152 ~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 152 NEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp SHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 222233344444333 356889999999999999999999887443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0013 Score=69.58 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=36.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TG---D~~~ta~~ia~~~gi~~ 701 (950)
+.+-|+++++|++++++|++++++|| +.........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34457899999999999999999988 77777778888888854
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00024 Score=73.21 Aligned_cols=105 Identities=22% Similarity=0.183 Sum_probs=64.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCccc-ccCCHHHHhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEF-REKSDEELSK 722 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~-~~~~~~~~~~ 722 (950)
.++.|++.++++.|++.|+++.++|+... ..+..+.+++|+.-. ......... ..+. +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~~~g~~~-----~ 128 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACAYHEAGVGP-----L 128 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCCTTCCST-----T
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEeecCCCCcee-----e
Confidence 57889999999999999999999999987 677888888887411 111110000 0000 0
Q ss_pred hhccccEEeecChh--hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 723 LIPKIQVMARSSPM--DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 723 ~~~~~~v~ar~~P~--~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.... + ....|. -=..+.+.+.-. .+.++||||+.||+.+.+.|++..
T Consensus 129 ~~~~--~-~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 129 AIPD--H-PMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp CCSS--C-TTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSE
T ss_pred cccC--C-ccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0000 0 011221 112223333222 256889999999999999999764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0014 Score=69.35 Aligned_cols=124 Identities=12% Similarity=0.133 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+..--+.++.+.+.. .....|+--.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~KP~p~~~~ 183 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK----------------EEKPAPSIFY 183 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC----------------CCCCCHHHHH
Confidence 567999999999998 59999999999999999999999864323333332211 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCc--ceeecCCCcH--HHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDG-TNDAPALHEADI--GLAMGIAGTE--VAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG-~ND~~al~~Adv--Giamg~~g~~--~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+.-. .+.++|+||+ .||+.+-+.|++ .+.++..+.+ .....+|+++.+ +..+.+++
T Consensus 184 ~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 184 HCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 334444333 3568899995 999999999999 5766522211 123458988854 77777655
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00085 Score=68.80 Aligned_cols=119 Identities=15% Similarity=0.239 Sum_probs=74.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++. +++.++|+.... .+.+|+...-+.++.+++.. .....|.--.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 162 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG----------------IGKPDPAPFL 162 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT----------------CCTTSHHHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC----------------CCCcCHHHHH
Confidence 4678999999999998 999999987754 24455542111121111100 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCc-cCHHhhhcCCcceee---cCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~-ND~~al~~AdvGiam---g~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+.+.+.-. .+.++++||+. ||+.|.+.|+++.++ |....+. +..+|+++.+ +..+.+++.
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 163 EALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred HHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 333344322 35688999998 999999999998877 2122222 6678999965 888887663
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00032 Score=65.72 Aligned_cols=97 Identities=10% Similarity=0.032 Sum_probs=64.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .....|+--.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 81 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELG----------------VEKPEEAAFQ 81 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHS----------------CCTTSHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCC----------------CCCCCHHHHH
Confidence 467899999999999999999999999888888888888754222222211100 0111222222
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.+.+.+.-. .+.++|+||+.+|..+.++|++..
T Consensus 82 ~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 82 AAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEE
Confidence 233333222 246889999999999999999743
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00092 Score=74.82 Aligned_cols=133 Identities=17% Similarity=0.175 Sum_probs=83.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+...-+ .++++++... -.+..+...- +..|.-
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~-----~~~~~~~~kp--~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE-----AENMYPQARP--LGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH-----HHHHSTTSCC--CCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc-----cccccccccC--CCCCCH
Confidence 678999999999999999999999999999999999999864322 3443332110 0000000000 112322
Q ss_pred HHHHHHHHhhh----------------CCCEEEEEcCCccCHHhhhcCCcc-eeecCCCc-------HHHHhcCCEEecc
Q 002230 738 KHTLVKHLRTT----------------LGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-------EVAKESADVIILD 793 (950)
Q Consensus 738 K~~~V~~l~~~----------------~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~-------~~ak~~aDivl~~ 793 (950)
.. +...+++. ..+.++|+||+.+|+.+-++|++. |.+. .|. +.....||+++.+
T Consensus 288 ~~-~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~s 365 (384)
T 1qyi_A 288 FS-YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINH 365 (384)
T ss_dssp HH-HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESS
T ss_pred HH-HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEECC
Confidence 11 12222221 025689999999999999999975 3333 221 2223468999855
Q ss_pred CChhHHHHHH
Q 002230 794 DNFSTIVTVA 803 (950)
Q Consensus 794 ~~~~~i~~~i 803 (950)
+..+..++
T Consensus 366 --l~eL~~~l 373 (384)
T 1qyi_A 366 --LGELRGVL 373 (384)
T ss_dssp --GGGHHHHH
T ss_pred --HHHHHHHH
Confidence 88877665
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00026 Score=75.16 Aligned_cols=58 Identities=14% Similarity=0.265 Sum_probs=48.4
Q ss_pred hhHHHHHHHHhhhC-CCEEEEEcC----CccCHHhhhcCC-cceeecCCCcHHHHhcCCEEeccCC
Q 002230 736 MDKHTLVKHLRTTL-GEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVIILDDN 795 (950)
Q Consensus 736 ~~K~~~V~~l~~~~-g~~v~~vGD----G~ND~~al~~Ad-vGiamg~~g~~~ak~~aDivl~~~~ 795 (950)
.+|...++.| ... .+.|+++|| +.||.+||+.|+ +|++|| ++.+..|+.||+++.+++
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 6798888888 221 268999999 999999999999 599998 999999999999886543
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00011 Score=74.38 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=63.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.+.++.|++.|+++.++|+........+... +|+...-..++.+.+. -.....|+--
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~----------------~~~Kp~~~~~ 154 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDL----------------GMRKPEARIY 154 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHH----------------TCCTTCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEeccc----------------CCCCCCHHHH
Confidence 4579999999999999999999999765443332222 3322100111111110 0011122233
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcH
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~ 781 (950)
..+.+.+.-. .+.++++||+.||..|.+.|++...+...+.+
T Consensus 155 ~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 155 QHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 3444444433 35688999999999999999998887644443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0013 Score=69.19 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=66.5
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
+.++.|++.+.++.|++.|+++.++||+.. ..+..-.+++||..-.. -.++.|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------KTLLLKK 156 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST----------------------TTEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc----------------------ceeEecC
Confidence 457789999999999999999999999965 47777778899964210 0144444
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHh
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~a 765 (950)
...+|....+.+.+. | .+|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~L~~~-gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 157 DKSNKSVRFKQVEDM-GYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SCSSSHHHHHHHHTT-TCEEEEEEESSGGGGCG
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHcCc
Confidence 456788888888875 4 689999999999987
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0025 Score=67.50 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=37.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~~gi~~ 701 (950)
+++-+++.+++++|++.|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5567899999999999999999999 889888888888888853
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.017 Score=60.43 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=36.1
Q ss_pred CCccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 002230 661 MRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~~gi~~ 701 (950)
+-++..++++.+++.|+++.++| |..........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 55788999999999999999999 999998888888888753
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.00076 Score=69.54 Aligned_cols=103 Identities=14% Similarity=0.032 Sum_probs=67.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH------HHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA------RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia------~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
++.|++.+.++.|++. +++.++|+.....+..+. +..|+...-+.++.+.+. -....
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~----------------~~~KP 174 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEM----------------KMAKP 174 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHH----------------TCCTT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeeccc----------------CCCCC
Confidence 3669999999999999 999999999998888666 444543211111111110 01112
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCc
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~ 780 (950)
.|+--..+.+.+.-. .+.++++||+.||+.|.+.|+++.++...+.
T Consensus 175 ~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 175 EPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 223333444444433 3568899999999999999999988874443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0014 Score=68.94 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=65.5
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
++++.|++.+.++.|++.|+++.++||++. ..+..-.+++||..-.. -.++.|.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----------------------SAFYLKK 156 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG----------------------GGEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc----------------------cceeccC
Confidence 467889999999999999999999999965 46677778899964110 0144444
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHh
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~a 765 (950)
.-..|....+.+.+. | ..|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~l~~~-Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 157 DKSAKAARFAEIEKQ-GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCSCCHHHHHHHHHT-TEEEEEEEESSGGGGCS
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHhcc
Confidence 446788888888776 5 579999999999886
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.00025 Score=74.50 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=43.0
Q ss_pred hhHHHHHHHHhhhC-CCEEEEEcC----CccCHHhhhcCCc-ceeecCCCcHHHHhcCCEE
Q 002230 736 MDKHTLVKHLRTTL-GEVVAVTGD----GTNDAPALHEADI-GLAMGIAGTEVAKESADVI 790 (950)
Q Consensus 736 ~~K~~~V~~l~~~~-g~~v~~vGD----G~ND~~al~~Adv-Giamg~~g~~~ak~~aDiv 790 (950)
.+|...++.| ... .+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 5788888877 211 268999999 9999999999988 99999 9999999999986
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.003 Score=63.10 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=24.5
Q ss_pred HHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCC
Q 002230 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (950)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (950)
.+.+..+..+|..++.+| .|..++|++++.|+
T Consensus 154 ~~~~~~~~~~G~T~V~va----------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 154 NDFMTEHERKGRTAVLVA----------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHTTCEEEEEE----------------ETTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEcC
Confidence 344566778888778887 35679999999996
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0053 Score=61.95 Aligned_cols=89 Identities=12% Similarity=0.117 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--hh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~~ 737 (950)
++.|++.++++.|+++|+++.++||.....+..+.. ... +.++.+.+. .+..| +-
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~--d~v~~~~~~------------------~~~KP~p~~ 92 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVN--DWMIAAPRP------------------TAGWPQPDA 92 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTT--TTCEECCCC------------------SSCTTSTHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccC--CEEEECCcC------------------CCCCCChHH
Confidence 578999999999999999999999998877755443 111 122222221 11223 21
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv 771 (950)
=....+.+.-...+.++||||..+|+.+-++|++
T Consensus 93 ~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 93 CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 1222333322212468899999999999999997
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.007 Score=62.39 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=31.5
Q ss_pred ccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 002230 663 PGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (950)
Q Consensus 663 ~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~~gi~ 700 (950)
+.+.++++.+++.|+++..+| |...........+.|+.
T Consensus 22 ~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 444889999999999999999 88887777777777764
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0052 Score=64.35 Aligned_cols=117 Identities=13% Similarity=0.210 Sum_probs=78.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
.++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-+.++.+++.. .....|+-=
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~----------------~~KP~p~~~ 176 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCK----------------NNKPHPEIF 176 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCC----------------SCTTSSHHH
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccC----------------CCCCcHHHH
Confidence 3568999999999999999999877654 3566778899875444444443321 112233333
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceeecCCCcHHHHhcCCEEeccCChhHH
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTI 799 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giamg~~g~~~ak~~aDivl~~~~~~~i 799 (950)
..+.+.+.-. .+.++||||..+|+.+-++|++ .|+++ +..+ ...||+++.+ +..+
T Consensus 177 ~~a~~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 177 LMSAKGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEESS--GGGC
T ss_pred HHHHHHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEECC--hHhC
Confidence 4445555433 3568899999999999999998 45554 3322 2458999854 6554
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.004 Score=67.27 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=68.7
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH--------cCCccCCceeeeCcccccCCHHHHhhhhc
Q 002230 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTA---KAIARE--------CGILTDNGIAIEGPEFREKSDEELSKLIP 725 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta---~~ia~~--------~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (950)
.++++.|++.++++.|++.|+++.++||.....+ ...-+. .|+. ...++.+.+..
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~------------ 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQGD------------ 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTTC------------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCCC------------
Confidence 4678899999999999999999999999985432 333444 6873 22333322211
Q ss_pred cccEEeecChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCcce
Q 002230 726 KIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.+..|+-|..+.+.+... . +.++|+||..+|+.|-++|++-.
T Consensus 251 -----~kp~p~~~~~~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 -----TRKDDVVKEEIFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp -----CSCHHHHHHHHHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred -----CcHHHHHHHHHHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeE
Confidence 133466777777777543 3 34688999999999999999853
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0066 Score=62.02 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=61.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...-+.++.+.+.. .....|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIK----------------AVKPNPKIFG 157 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC---------------------------CCHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccC----------------CCCCCHHHHH
Confidence 4679999999999999999999999866 4788888999864222222222110 1112222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCcc-CHHhhhcCCccee
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTN-DAPALHEADIGLA 774 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~N-D~~al~~AdvGia 774 (950)
.+.+.+.- .. +|+||+.+ |+.+-+.|++...
T Consensus 158 ~~~~~~~~---~~-~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 158 FALAKVGY---PA-VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp HHHHHHCS---SE-EEEESSCCCCCCCSSSCSEEEE
T ss_pred HHHHHcCC---Ce-EEEcCCchHhHHHHHHCCCeEE
Confidence 33333332 23 89999999 9999999998754
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0086 Score=63.23 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=37.6
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCccC
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILTD 702 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~~gi~~~ 702 (950)
.++ |+++++|++++++|++++++| |+.........+++|+...
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 355 899999999999999999999 8888888888889998543
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.013 Score=60.35 Aligned_cols=115 Identities=11% Similarity=0.177 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+... +... +... ..|.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------f~~~-~~~~---~~K~ 149 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------VEGR-VLIY---IHKE 149 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------TTTC-EEEE---SSGG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------cCee-EEec---CChH
Confidence 57899999999999999 9999999999899999999997521 0000 1111 1222
Q ss_pred HHHHHHhh-hCCCEEEEEcCCcc---CHHhhhcCCcc-eeecCCC----c-HHHHh--cCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRT-TLGEVVAVTGDGTN---DAPALHEADIG-LAMGIAG----T-EVAKE--SADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~-~~g~~v~~vGDG~N---D~~al~~AdvG-iamg~~g----~-~~ak~--~aDivl~~~~~~~i~~~i 803 (950)
..++.+.+ ...+.++|+||+.| |..+-+.|++. +.+. .| . +..++ .+|+++.+ +..+.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~l 222 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVER--IGDLVEMD 222 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEESS--GGGGGGCG
T ss_pred HHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeecC--HHHHHHHH
Confidence 23333322 11468999999999 65566777753 2222 22 2 22333 38998854 66665443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.0036 Score=61.98 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=61.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCcee-eeC----cccccCCHH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIA-IEG----PEFREKSDE 718 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~v-i~g----~~~~~~~~~ 718 (950)
-++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+.- ..+ +++ .+.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~v~~s~~~~~~~~------ 112 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF--DEVLICPHLPADEC------ 112 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE--EEEEEECCCGGGCC------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe--eEEEEcCCCCcccc------
Confidence 357899999999999999999999998 4667788888899851 122 221 110
Q ss_pred HHhhhhccccEEeecChhh--HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 719 ELSKLIPKIQVMARSSPMD--KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~--K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
....|.. =..+.+.+.-. .+.++||||+.+|+.+-+.|++..
T Consensus 113 ------------~~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 113 ------------DCRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp ------------SSSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEE
T ss_pred ------------cccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0111211 01112222222 345889999999999999999853
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.017 Score=63.17 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=73.1
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc----CCccCCceee----eCcc-cccCC-HHHHhh----
Q 002230 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIAI----EGPE-FREKS-DEELSK---- 722 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~----gi~~~~~~vi----~g~~-~~~~~-~~~~~~---- 722 (950)
....+.|+..+.++.|+++|++|+++||-+...++.+|..+ ||..++-+-+ .... -.... ..+..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeecccccccccccccccccccc
Confidence 34457899999999999999999999999999999999984 6654421111 1000 00000 011111
Q ss_pred --hhccccEEee-----cChhhHHHHHHHHhhhCCCEEEEEcCC-ccCHHhhhc--CCcceeec
Q 002230 723 --LIPKIQVMAR-----SSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHE--ADIGLAMG 776 (950)
Q Consensus 723 --~~~~~~v~ar-----~~P~~K~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~--AdvGiamg 776 (950)
......+..+ +--+-|...|+........-+++.||+ ..|.+||.. ++.|+.+-
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 0011111111 223678887777654413568889999 579999965 44555443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.15 E-value=0.022 Score=60.15 Aligned_cols=84 Identities=17% Similarity=0.300 Sum_probs=55.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~---~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
.++.|++.++++.|++.|+++.++||.. ........+.+|+. .....++.+++. .
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--------------------~ 159 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--------------------K 159 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------------------C
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------------------C
Confidence 4567999999999999999999999998 44455556778986 333344443320 0
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhh
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al 766 (950)
.|.-...+ +... -..++|+||..+|..+-
T Consensus 160 K~~~~~~~---~~~~-~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 160 GKEKRREL---VSQT-HDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp SSHHHHHH---HHHH-EEEEEEEESSGGGSTTC
T ss_pred CcHHHHHH---HHhC-CCceEEeCCCHHHhccc
Confidence 12211111 1112 24688999999998875
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.13 Score=53.27 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=32.7
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~~gi~~ 701 (950)
.++.-+++.++++.+++.|+++.++| |..........+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555788999999999999999999 666666666666777754
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.89 E-value=0.034 Score=58.60 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=72.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~---gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
-++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+..--+.++.+ + +.....|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~-----------------~~~KP~p 190 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-K-----------------IGHKVES 190 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-G-----------------GCCTTCH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-C-----------------CCCCCCH
Confidence 367899999999999999999999999988887776644 454321122221 1 1111122
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCc---HHHHhcCCEEecc
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT---EVAKESADVIILD 793 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~---~~ak~~aDivl~~ 793 (950)
+-=..+.+.+.-. .+.++||||..+|+.+-++|++- |.+...+. +.....+|.++.+
T Consensus 191 ~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 191 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp HHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 2223444444433 35689999999999999999984 33321121 1122446777643
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.051 Score=58.64 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=35.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~~gi~ 700 (950)
.+++-+++.+++++|++.|++++++| |..........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566889999999999999999999 57777777777778875
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.053 Score=56.26 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=72.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|.... +..+-+.+|+...-+.++.+.+... ....|+-=.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~----------------~KP~p~~~~ 156 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKN----------------SKPDPEIFL 156 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSS----------------CTTSTHHHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccC----------------CCCcHHHHH
Confidence 5679999999999999999999998653 4566788898754444444433210 112232223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcHHHHhcCCEEecc
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~~ak~~aDivl~~ 793 (950)
...+.+.-. .+.++||||..+|+.+-++|++- |+++ .|. ..+|.++.+
T Consensus 157 ~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 157 AACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred HHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 344444433 36789999999999999999973 4444 332 346766643
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=93.02 E-value=0.26 Score=47.90 Aligned_cols=31 Identities=13% Similarity=0.253 Sum_probs=23.0
Q ss_pred HHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccC
Q 002230 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659 (950)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D 659 (950)
.+.+..+..+|..++.+| .|..++|++++.|
T Consensus 135 ~~~~~~~~~~G~T~v~va----------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 135 SDAMTDHEMKGQTAILVA----------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHTTTSEEEEEE----------------ETTEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEC
Confidence 344556677888778787 3567899999987
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=91.44 E-value=0.022 Score=58.11 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=53.8
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC--
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR----ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS-- 734 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~----~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~-- 734 (950)
+.+++.+.++.|+++|+++.++|+.....+..+.+ ..+... .|.. ...+....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------~~~~---------------~~~~~~~KP~ 147 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------TNMN---------------PVIFAGDKPG 147 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------TTBC---------------CCEECCCCTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------cccc---------------hhhhcCCCCC
Confidence 46789999999999999999999987543322222 222210 0000 00122223
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
|+-.. +.+++. |- ++|+||..+|+.+-+.|++-
T Consensus 148 p~~~~---~~~~~~-g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 148 QNTKS---QWLQDK-NI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CCCSH---HHHHHT-TE-EEEEESSHHHHHHHHHTTCE
T ss_pred HHHHH---HHHHHC-CC-EEEEECCHHHHHHHHHCCCe
Confidence 33333 334433 54 99999999999999999975
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=89.60 E-value=0.11 Score=60.13 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
++.|++.+.++.|+++|+++.++|+- ......... .|+...-+.++.+++.. ...-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~fd~i~~~~~~~----------------~~KP 161 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMHFDFLIESCQVG----------------MVKP 161 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTTSSEEEEHHHHT----------------CCTT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhheeEEEeccccC----------------CCCC
Confidence 57899999999999999999999996 222222211 13332222333332211 0112
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam 775 (950)
.|+-=..+.+.+.-. .+.++++||..||+.+.+.|++....
T Consensus 162 ~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 162 EPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 222333444444433 35688889999999999999997654
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=88.41 E-value=0.0097 Score=59.57 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=35.9
Q ss_pred CCCCccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCC
Q 002230 659 DPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI 699 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~a-Gi~v~m~TGD~~~ta~~ia~~~gi 699 (950)
-++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999988777777777776
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=87.05 E-value=0.61 Score=48.54 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=61.1
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
-..++.|++.++++.|+ .|+++ ++|...... +.. .+.+.. . ....+...+..- ......
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~-------------~~~~~~--~-l~~~f~~~~~~~-~~~~~K 183 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG-------------LLPGAG--S-VVTFVETATQTK-PVYIGK 183 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE-------------EEECHH--H-HHHHHHHHHTCC-CEECST
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC-------------cccCCc--H-HHHHHHHHhCCC-ccccCC
Confidence 34567899999999997 89997 777655311 000 000000 0 000111111100 112223
Q ss_pred hh--hHHHHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCcc---eeecCCCcHHHHh---cCCEEecc
Q 002230 735 PM--DKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIG---LAMGIAGTEVAKE---SADVIILD 793 (950)
Q Consensus 735 P~--~K~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvG---iamg~~g~~~ak~---~aDivl~~ 793 (950)
|. -=..+.+.+.-. .+.++|+||+ .||+.+.++|++. +..|....+..++ .+|+++.+
T Consensus 184 P~p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 184 PKAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp TSHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CCHHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 32 222333333322 2568999999 6999999999987 4455222222232 58998844
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=86.27 E-value=0.73 Score=43.49 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=34.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCcc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILT 701 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~---~~ta~~ia~~~gi~~ 701 (950)
+-|++.++|++++++|++++++||++ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45789999999999999999999998 566677777888753
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=85.37 E-value=0.55 Score=52.98 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=33.9
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCC------------HHHHHHHHHHcCCc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDN------------INTAKAIARECGIL 700 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~------------~~ta~~ia~~~gi~ 700 (950)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22367788889984
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 | Back alignment and structure |
|---|
Probab=85.19 E-value=0.03 Score=46.11 Aligned_cols=58 Identities=28% Similarity=0.261 Sum_probs=48.6
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPD 101 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 101 (950)
+..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+...+.++++..||.+.+.
T Consensus 13 C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 13 CAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPN--LVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTT--TCCHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCC--CCCHHHHHHHHHHCCCceEEc
Confidence 4568888999999999999999999999999998655 456677888899999987643
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=83.43 E-value=0.51 Score=46.61 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=62.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
.+||++.+.++.|.+. +++.+.|.-....|..+.+.+|...--..++.+++ ....|.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~----------------------~~~~k~ 111 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRES----------------------CVFHRG 111 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGG----------------------SEEETT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccC----------------------ceecCC
Confidence 5799999999999998 99999999999999999999997531111221111 011122
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi 773 (950)
..++.++.- | +.|.++||..+|..+=..+++-|
T Consensus 112 ~~~k~L~~L-g~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 112 NYVKDLSRL-GRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECCGGGT-CSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cEeccHHHh-CCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 233334332 3 46889999999998877776655
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=82.88 E-value=3.1 Score=40.27 Aligned_cols=101 Identities=10% Similarity=0.041 Sum_probs=59.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC---CH---HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD---NI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD---~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
++.||+.+.++.|++ ++++.++|+- .. .+...+.+..|.......+++|++
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~---------------------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK---------------------- 125 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG----------------------
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc----------------------
Confidence 678999999999998 4999999997 21 112234444554432223333321
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.| . +.++++||..+|+. ++|+-.|.+. .+... ...++.++.+ +..+..++
T Consensus 126 ---~~---------l--~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~~--~~el~~~l 175 (180)
T 3bwv_A 126 ---NI---------I--LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVSG--WRDVKNYF 175 (180)
T ss_dssp ---GG---------B--CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEECS--HHHHHHHH
T ss_pred ---Ce---------e--cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecCC--HHHHHHHH
Confidence 11 1 23688999999985 5566555443 22221 1346777644 77766554
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.79 E-value=0.46 Score=47.58 Aligned_cols=90 Identities=14% Similarity=0.070 Sum_probs=63.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
.+||++.+.++.|++. +++.+.|.-....|..+.+.+|+..--..++.+++. ...|.
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~----------------------~~~k~ 124 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESC----------------------VFHRG 124 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGC----------------------EEETT
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccc----------------------eecCC
Confidence 5799999999999998 999999999999999999999985321122222211 11122
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi 773 (950)
..++.++.- | +.|.+++|..++..+-+.|++-|
T Consensus 125 ~~lK~L~~L-g~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 125 NYVKDLSRL-GRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp EEECCGGGS-SSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred ceeeeHhHh-CCChhHEEEEECCHHHhhhCccCccEE
Confidence 233334332 3 46889999999998877776665
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=82.77 E-value=1.3 Score=46.04 Aligned_cols=90 Identities=8% Similarity=0.058 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--C---------CccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC--G---------ILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~--g---------i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
++.||+.+.++. |+++.++|..+...+..+-+.+ | +..- +. ..+..
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~---------~~--------~~f~~-- 181 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY---------ID--------GYFDI-- 181 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG---------CC--------EEECH--
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh---------cc--------eEEee--
Confidence 567899888887 9999999999998888877766 4 2110 00 00000
Q ss_pred EEeecChh--hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 729 VMARSSPM--DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 729 v~ar~~P~--~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
+.+...|. -=..+.+.+.-. .+.++|+||..+|+.+-++|++-.
T Consensus 182 ~~~g~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 182 NTSGKKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEE
T ss_pred eccCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEE
Confidence 11112332 223334444433 356889999999999999999753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 950 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 7e-38 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-32 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 2e-24 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-22 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-20 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-16 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 8e-19 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-18 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-12 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-11 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 5e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 6e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.001 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.002 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 137 bits (345), Expect = 7e-38
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GI 705
T DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
A G EF + E + + AR P K +V++L++ A+TGDG NDAPA
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPA 128
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806
L +A+IG+AMG +GT VAK ++++++ DDNFSTIV + G
Sbjct: 129 LKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 141 bits (356), Expect = 5e-37
Identities = 42/390 (10%), Positives = 95/390 (24%), Gaps = 59/390 (15%)
Query: 433 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 492
+ + L +G + I + + + ++I S G +
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRN-RIFQKDKILNKLKSLGLNSNWDM 80
Query: 493 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 552
+ S L+ + + L A + + Q
Sbjct: 81 LFIVFSIHLI----------------DILKKLSHDEIEAFMYQDEPVELKLQNISTNLAD 124
Query: 553 VKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612
+ + V + + A+ + +++A + L
Sbjct: 125 CFNLNEQLPLQFLDNVKVGKNNIYAALEEFAT---------------TELHVSDATLFSL 169
Query: 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM--RPGVKESVA 670
+ A E + L + G + + + VK +
Sbjct: 170 KGALWTLAQEVYQEWYLGSKLYEDVE----KKIARTTFKTGYIYQEIILRPVDEVKVLLN 225
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKL----- 723
+ AG + + TG G+L + + E +
Sbjct: 226 DLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 724 ----IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMG 776
+ + + + V + GD D + + IG G
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 777 IAGTEVAKE----SADVIILDDNFSTIVTV 802
+ G + A E AD +I ++ + V
Sbjct: 345 LKGKDAAGELEAHHADYVI--NHLGELRGV 372
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 122 bits (307), Expect = 3e-32
Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 15/212 (7%)
Query: 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KT 521
MTV +I E D ++ + L + G+ N K
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 522 EILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVH 579
+ G +E+A+L+ L G + R + V FNS K + E +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI----- 634
KGA E IL C L G+ +PL++ + + R L + +
Sbjct: 122 MKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 635 --GNEFSADAP-IPTEGYTCIGIVGIKDPMRP 663
G +F D PTE +G++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 97.9 bits (243), Expect = 2e-24
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 30/155 (19%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG 709
T G D ++ K +V + GI V M+TGDN +A+AI+RE
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL------------ 58
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
V+A P K VK L+ EVVA GDG NDAPAL +A
Sbjct: 59 ---------------NLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQA 101
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804
D+G+A+G +G++VA ES D++++ D+ +V +
Sbjct: 102 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 99.4 bits (247), Expect = 2e-22
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 33/210 (15%)
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 823
P A I + + +AK++A V ++ +V GR++Y N+++F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 824 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGN 883
NV ++ F +A L L VQLLWVN++ D L A AL PP+ D+M R P K
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 884 FISNVMWRNILGQSLYQFLI-----------------IWYLQTRGKAVFRLDGPDPDLI- 925
IS ++ + Y + Y Q D P + +
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 926 --------LNTLIFNTFVFCQVCLSTCIRS 947
T+ + V ++C + S
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLS 395
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 92.0 bits (228), Expect = 5e-20
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 22/177 (12%)
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
D+TPLQ KL+ + K+ V + + + G F + G + +F
Sbjct: 130 DKTPLQQKLDEFGEQLSKVISLICVAVWLINI-GHFNDPVH-------GGSWIRGAIYYF 181
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK--TG 459
IAV + V A+PEGLP +T LA ++M A+VR L + ET+G A +
Sbjct: 182 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRY 241
Query: 460 TLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516
+++N V+ + A G +LL ++ + +G
Sbjct: 242 LISSNVGEVVCIFLT------------AALGLPEALIPVQLLWVNLVTDGLPATALG 286
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.7 bits (196), Expect = 4e-16
Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 8 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
+ A +S V+ EG V ILL++ A Q E+
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQ---------ERNAEN 114
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285
A + + D P G+Q+ + LIN
Sbjct: 115 AIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLIN 160
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.6 bits (208), Expect = 8e-19
Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA------------- 545
+L N E +G TETA+ +
Sbjct: 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 111
Query: 546 ---ERQASKIVKVEPFNSVKKQMGVVIELPEGG-----FRVHCKGASEIILAACDKFLNS 597
RQ K F+ +K M V + ++ KGA E ++ C+
Sbjct: 112 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV- 170
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 171 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 230
Query: 650 -TCIGIVGI 657
T +G+VG+
Sbjct: 231 LTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 83.5 bits (205), Expect = 2e-18
Identities = 27/210 (12%), Positives = 59/210 (28%), Gaps = 11/210 (5%)
Query: 612 LNETIEKFASEALRTLCLACM--EIGNEFSADAPIPTEGYTC----IGIVGIKDPMRPGV 665
+ ++ FA L + + + + V +R G
Sbjct: 21 IINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGF 80
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725
+E VA I +++G + I F + +
Sbjct: 81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR--IYCNHASF-DNDYIHIDWPHS 137
Query: 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE 785
+ K +++ L + + + GD D A +D+ A E ++
Sbjct: 138 CKGTCSNQCGCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQ 196
Query: 786 SADVIILDDNFSTIVTVAKWGRSVYINIQK 815
+ + + D F I + + V +Q
Sbjct: 197 NLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.8 bits (152), Expect = 2e-12
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESE 294
+V R + ++I D++PGDIV + +GD+VPAD +S ++ +++S LTGES
Sbjct: 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESV 61
Query: 295 PVNVNA------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
V + L SGT + G +V T G+ T+ GK+ +
Sbjct: 62 SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.1 bits (147), Expect = 5e-11
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
I + PG++E V+ + + V +++G + + +A + I N A
Sbjct: 76 IAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-- 133
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIG 772
+ + + K ++K L+ + + + GDG D A AD
Sbjct: 134 ----YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 773 LAMG-IAGTEVAKESADVIILD 793
+ G + K++A I D
Sbjct: 190 IGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 51.0 bits (120), Expect = 1e-07
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
G +E++ ++ G V +V+G I + G+ + + + D
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD-- 132
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ + + + K L + VAV GDG ND +A + +A
Sbjct: 133 ----VEGEVLKENAKGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKIAFC--A 185
Query: 780 TEVAKESADVIILDDNFSTIVTVAK 804
+ KE AD+ I + I+ K
Sbjct: 186 KPILKEKADICIEKRDLREILKYIK 210
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 2e-06
Identities = 16/77 (20%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
+L V + D +L V GD ND L EA G+
Sbjct: 113 HKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH- 171
Query: 778 AGTEVAKESADVIILDD 794
A V +E +
Sbjct: 172 APENVIREFPQFPAVHT 188
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 2e-06
Identities = 32/226 (14%), Positives = 55/226 (24%), Gaps = 11/226 (4%)
Query: 586 IILAACDK---FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA 642
I + D N + A+ T+ A
Sbjct: 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFA-EAASILIGTSG 60
Query: 643 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 702
P+ E I + + +E + I R T I+ +
Sbjct: 61 PVVAEDGGAISYKKKRIFLASMDEEWILWNE---IRKRFPNARTSYTMPDRRAGLVIMRE 117
Query: 703 NGIAIEGPEFREKSDEELSKLIPK--IQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDG 759
E + + L + I V + + VA GDG
Sbjct: 118 TINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177
Query: 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805
ND A +A+ A ++ KE+AD + +
Sbjct: 178 ENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
E AV GD ND L A G+AMG A E K AD + L ++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 273
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.4 bits (93), Expect = 5e-04
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
L + R E AV GD ND P D +G + A+ + +I
Sbjct: 188 LDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.3 bits (93), Expect = 6e-04
Identities = 30/221 (13%), Positives = 57/221 (25%), Gaps = 68/221 (30%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-----------CGILTD 702
+ + ES+ G+TV +++G+ I A+ GI+ D
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFD 73
Query: 703 NGIAIE----------------------------------GPEFREKSDEELSKLIPKIQ 728
N +I+ G + + + + K
Sbjct: 74 NDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRG 133
Query: 729 VMARSSPMDKHTLVKHLRTTLG------------EVVAVTGDGTNDAPALHEADIGLAMG 776
+ S H + + + + V GD ND P
Sbjct: 134 FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA 193
Query: 777 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 817
A T+ K +D V+ +G + + F
Sbjct: 194 NA-TDNIKAVSD----------FVSDYSYGEEIGQIFKHFE 223
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 40.4 bits (93), Expect = 6e-04
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
+ V V GD ND L A+ A T+ AK A ++ +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSH 267
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.6 bits (91), Expect = 0.001
Identities = 37/240 (15%), Positives = 67/240 (27%), Gaps = 40/240 (16%)
Query: 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 653
LN N E+ + + L+ + R L F P +
Sbjct: 13 LLNDNLEISEKDRRNIEKLSRKCYVVFASG-RMLVSTLNVEKKYFKRTFPTIAYNGAIVY 71
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
+ + + VA I V + + + ++R
Sbjct: 72 LPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYR 131
Query: 714 EKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVT---------------- 756
+ + EL + +++ +P L + L +VV V
Sbjct: 132 VEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDK 191
Query: 757 ---------------------GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
GD ND EA + +AM A E KE++D++ L +N
Sbjct: 192 GKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNN 250
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 0.001
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
E + GD ND + A +G+A+ A KE A+ + +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNL 257
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.7 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792
K + + G E GDG ND L A IG+AMG A E K +AD +
Sbjct: 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTA 243
Query: 793 DDN 795
+
Sbjct: 244 PID 246
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.003
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
+ V GD NDA L A AMG A E K+ A D+N + V + V
Sbjct: 207 QNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNNHEGALNVIQA---VL 262
Query: 811 INIQKF 816
N F
Sbjct: 263 DNTYPF 268
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 950 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.95 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.89 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.26 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.21 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.13 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.06 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.06 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.05 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.01 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.97 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.95 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.92 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.89 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.78 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.71 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.69 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.65 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.41 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.99 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.97 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.65 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.51 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.48 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.39 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.29 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.04 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.92 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.84 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.72 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.71 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.53 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.52 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.5 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.15 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.11 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.96 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.69 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.94 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.73 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.63 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.24 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.1 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.08 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.02 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.64 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.44 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 92.43 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.25 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 92.2 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 90.86 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 90.7 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 90.68 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 90.63 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 90.31 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 89.67 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 89.3 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 88.98 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 88.61 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 88.49 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 88.22 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 86.36 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=8.1e-38 Score=362.41 Aligned_cols=231 Identities=24% Similarity=0.364 Sum_probs=180.4
Q ss_pred hcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCC
Q 002230 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP 197 (950)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~ 197 (950)
..+++++++.|+||+++||+++| +++|+++||+|++++++++++|+.++++|+|+++++|++++++|++++...++..
T Consensus 6 ~~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 83 (472)
T d1wpga4 6 SKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEE 83 (472)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTS
T ss_pred hCCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 35799999999999999999987 9999999999999999999999999999999999999999999999998765543
Q ss_pred --CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEE
Q 002230 198 --KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGL 275 (950)
Q Consensus 198 --~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgi 275 (950)
..|+|++.|++.+++...++.+++++.++..+++.+...+.
T Consensus 84 ~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~------------------------------------- 126 (472)
T d1wpga4 84 TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA------------------------------------- 126 (472)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------------------
T ss_pred cchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------------------
Confidence 57999988877777777777666666655555544321110
Q ss_pred EEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHH
Q 002230 276 FVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT 355 (950)
Q Consensus 276 ll~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~ 355 (950)
...+++|+|.++++++.
T Consensus 127 ---------------------------------------------------------------~~~~~~P~d~~l~~~g~ 143 (472)
T d1wpga4 127 ---------------------------------------------------------------TEQDKTPLQQKLDEFGE 143 (472)
T ss_dssp ---------------------------------------------------------------CCCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ccccCchHHHHHHHHHH
Confidence 11235888889999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccc
Q 002230 356 IIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 435 (950)
Q Consensus 356 ~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ 435 (950)
.++..+..++...+...+.++. . .. ........+.++|..+++++|+++|||||+++|++++++++||+|+|
T Consensus 144 ~i~~~~~~~~~~~~~~~~~~~~-~-~~------~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~ 215 (472)
T d1wpga4 144 QLSKVISLICVAVWLINIGHFN-D-PV------HGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKN 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHCCTTSS-S-CC------SSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-H-HH------hhhhhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhcc
Confidence 8887776666555543222110 0 00 11111224567788999999999999999999999999999999999
Q ss_pred cccccchhhhccCCeeEEeeCCc
Q 002230 436 ALVRHLAACETMGSATSICSDKT 458 (950)
Q Consensus 436 ilvr~~~~~E~lg~v~~I~~DKT 458 (950)
++||++++||++|+.+++|+|||
T Consensus 216 ~lVr~L~avE~~g~~~~~~~~k~ 238 (472)
T d1wpga4 216 AIVRSLPSVETLGRAIYNNMKQF 238 (472)
T ss_dssp EEESCTTHHHHHTHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHhHHh
Confidence 99999999998888877777776
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.2e-33 Score=275.63 Aligned_cols=146 Identities=46% Similarity=0.692 Sum_probs=140.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
||+|++++++|+.|+++||+++|+|||+..||.++|+++||..++. ..++|.++..+...++.+..++..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999987654 467899999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHH
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~g 806 (950)
|+||..+|+.||++ |++|+|+|||.||+|||++|||||+|+ +|+++|+++||+++++++|.+|+++|+||
T Consensus 99 p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999 999999999999999999999999999 99999999999999999999999999998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=2e-29 Score=260.21 Aligned_cols=198 Identities=21% Similarity=0.244 Sum_probs=155.1
Q ss_pred eEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCC
Q 002230 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGG 541 (950)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~ 541 (950)
|+|+++|.+++.++.+.............++.+..|..+.++|+++.+..++.+ .+...|+|+|.||+.++.+.|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 999999999998876544333322233445566667788888888877654332 3456899999999999999999
Q ss_pred ChHHHhhhcceEEEecCCCCCceEEEEEEcC--CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHH
Q 002230 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619 (950)
Q Consensus 542 ~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~--~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 619 (950)
+....+..+++++.+||+|+||+|+++++.+ ++.+++|+|||||.|+++|++++. +|..++++++.++.+.+.+++|
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~ 160 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLEL 160 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999865 356899999999999999998875 7899999999999999999999
Q ss_pred HhcccceeEEEEEEcCCCC--------CCCCCCCCCceEEEeeeeccCCCCcc
Q 002230 620 ASEALRTLCLACMEIGNEF--------SADAPIPTEGYTCIGIVGIKDPMRPG 664 (950)
Q Consensus 620 a~~glR~l~~A~~~~~~~~--------~~~~~~~e~~l~~lG~~~i~D~lr~~ 664 (950)
|++|+||||+|||+++.+. .++.+..+++|+|+|++||+||||++
T Consensus 161 a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 161 GGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999999999999997652 12235568899999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=1.3e-28 Score=232.67 Aligned_cols=125 Identities=41% Similarity=0.619 Sum_probs=109.9
Q ss_pred EEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccE
Q 002230 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (950)
Q Consensus 650 ~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (950)
+..+.++++|++||+++++|+.|+++|++++|+|||+..+|.++|++|||.. +
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------v 63 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------V 63 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------E
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------h
Confidence 3455789999999999999999999999999999999999999999999965 9
Q ss_pred EeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 730 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+++++|++|..+|+.+|+ |++|+|+|||.||+|||++||+||||+ +++++++++||+++++++|.+|+++|+
T Consensus 64 ~~~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 64 IAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ECSCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ccccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 999999999999999985 568999999999999999999999999 899999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=5.2e-32 Score=304.64 Aligned_cols=325 Identities=12% Similarity=0.036 Sum_probs=221.2
Q ss_pred cchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCC
Q 002230 440 HLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN 519 (950)
Q Consensus 440 ~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 519 (950)
-+.+.|+||..+++|+|||||+|.|+|++..+.........+. ...+.+ .+++.... .|..+...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~--------~g~n~~-~dl~~~~~-~~~~~~~~----- 93 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKS--------LGLNSN-WDMLFIVF-SIHLIDIL----- 93 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHH--------TTCCCH-HHHHHHHH-HHHHHHHH-----
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhh--------cCCChh-HHHHHHHH-HHHHHHHH-----
Confidence 3567799999999999999999999998743221111111100 001111 22221111 11111111
Q ss_pred ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCC
Q 002230 520 KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599 (950)
Q Consensus 520 ~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g 599 (950)
...++|++.+++......+..+...++.+.....+||++.+|+|+++....++.+....||+++.+.
T Consensus 94 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----------- 160 (380)
T d1qyia_ 94 --KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----------- 160 (380)
T ss_dssp --TTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT-----------
T ss_pred --hhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC-----------
Confidence 1257788888887654444444455667777788999999999988765444444455566665431
Q ss_pred eeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCC
Q 002230 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGI 677 (950)
Q Consensus 600 ~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi 677 (950)
+++..+..+...+..++.+|+|++++|++.++.... ....+....|+++.+|++|| +++++++.|+++|+
T Consensus 161 ----~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~----~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi 232 (380)
T d1qyia_ 161 ----VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGF 232 (380)
T ss_dssp ----CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC----SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTC
T ss_pred ----CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc----ccchhhHhcccccccccccchhhHHHHHHHHHHCCC
Confidence 222334446667788999999999999876643211 11123345688999999665 99999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHH---------hhhhccccEEeecChhhHHHHHHHHh
Q 002230 678 TVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEEL---------SKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 678 ~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~---------~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
+++|+|||+..+|.++++++||... ...++++.+......... ...+....+++|.+|.+|..+++.++
T Consensus 233 ~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~ 312 (380)
T d1qyia_ 233 ELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI 312 (380)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTC
T ss_pred eEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 9999999999999999999999742 223455443321100000 01122334788999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHhhhcCC---cceeecCCCcHHHHh----cCCEEeccCChhHHHHHH
Q 002230 747 TTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKE----SADVIILDDNFSTIVTVA 803 (950)
Q Consensus 747 ~~~g~~v~~vGDG~ND~~al~~Ad---vGiamg~~g~~~ak~----~aDivl~~~~~~~i~~~i 803 (950)
.. ++.|+|||||.||++|+|.|| |||+||..|++..++ .||+++ +++..+.+++
T Consensus 313 ~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 313 VN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp SC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 98 999999999999999999999 999999888876554 899999 4588887654
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=8.3e-25 Score=199.38 Aligned_cols=98 Identities=35% Similarity=0.515 Sum_probs=89.0
Q ss_pred eEEEEeCCeE--EEEecCCcCCCcEEEeCCCCeecccEEEEeec--ceEEEcccccCCCCcccccC------------CC
Q 002230 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESEPVNVNA------------LN 302 (950)
Q Consensus 239 ~v~V~R~g~~--~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~--~l~VDeS~LTGEs~pv~k~~------------~~ 302 (950)
.++|+|+|++ ++|++.||||||||.|++||+|||||+|++++ ++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999984 78999999999999999999999999999754 48999999999999999852 35
Q ss_pred CeEEeccEEeeceEEEEEEEEeeccchhhHhhhh
Q 002230 303 PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336 (950)
Q Consensus 303 ~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~ 336 (950)
+++|+||.|.+|+++++|++||.+|.+|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998753
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.89 E-value=4.9e-23 Score=215.82 Aligned_cols=161 Identities=20% Similarity=0.185 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHhcCCCceeec-CCCceeecCChhhhHHHHHHHHcCCChHH----------------HhhhcceEEEecC
Q 002230 496 SASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQA----------------ERQASKIVKVEPF 558 (950)
Q Consensus 496 ~~~~~l~~~i~~~~~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~~----------------~~~~~~i~~~~pF 558 (950)
+.++.+..+.++||++.+..+ +++.+...|+|+|.||+.++.+.|++... .+..+++++.+||
T Consensus 48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence 344556677888888888765 34677889999999999999998876432 3468899999999
Q ss_pred CCCCceEEEEEEcCCC-----cEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHH--HhcccceeEEEE
Q 002230 559 NSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLAC 631 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~--a~~glR~l~~A~ 631 (950)
+|+||||+|+++.+++ .+++|+|||||.|+++|+.++. +|...+++++.++.+.+.++.+ |++|+||||+||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred cccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence 9999999999997654 4789999999999999998775 6788899999999999999986 789999999999
Q ss_pred EEcCCCCCCC-------CCCCCCceEEEeeeec
Q 002230 632 MEIGNEFSAD-------APIPTEGYTCIGIVGI 657 (950)
Q Consensus 632 ~~~~~~~~~~-------~~~~e~~l~~lG~~~i 657 (950)
|+++.+.... ...+|+||+|+|++||
T Consensus 207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 9997653211 1345789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.26 E-value=1.1e-11 Score=126.82 Aligned_cols=146 Identities=20% Similarity=0.231 Sum_probs=106.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee-eCcccc--------------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI-EGPEFR-------------------- 713 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~-~vi-~g~~~~-------------------- 713 (950)
.+.+.+.+++++|+++|++++++||++...+..++..+++..+ ++ .+. .+....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999999987532 11 000 000000
Q ss_pred -------------------cCCHHHHhhhh----cc-------ccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCc
Q 002230 714 -------------------EKSDEELSKLI----PK-------IQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT 760 (950)
Q Consensus 714 -------------------~~~~~~~~~~~----~~-------~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ 760 (950)
....+.+.++. .. ..+-.......|...++.+.+++| +.++++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00112222221 11 112223345788888888776544 5688999999
Q ss_pred cCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHH
Q 002230 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (950)
Q Consensus 761 ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~g 806 (950)
||.+|++.||+||||| ++.+.+|+.||+|+.+++..++.+++++.
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 9999999999999999 89999999999999999999998887653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.21 E-value=3.3e-11 Score=123.49 Aligned_cols=147 Identities=19% Similarity=0.174 Sum_probs=106.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee-eCcc-c-ccC---------------
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI-EGPE-F-REK--------------- 715 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~vi-~g~~-~-~~~--------------- 715 (950)
+.++.+++.+++++|++.|++++++||++...+..++...|+... ++.++ .... . ...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 456778999999999999999999999999999999999998542 11111 1000 0 000
Q ss_pred --------------------C---HHHHhhhh--ccccE-------EeecChhhHHHHHHHHhhhCC---CEEEEEcCCc
Q 002230 716 --------------------S---DEELSKLI--PKIQV-------MARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT 760 (950)
Q Consensus 716 --------------------~---~~~~~~~~--~~~~v-------~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ 760 (950)
. .+.+.... ....+ --.....+|...++.+.+++| +.|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 0 01111111 01111 111234689999998877645 4588889999
Q ss_pred cCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 761 ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
||.+|++.|++||||+ ++.+.+|+.||+++..++..+|.+++++
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 8999999999999999999999988753
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=4.6e-11 Score=125.80 Aligned_cols=144 Identities=24% Similarity=0.316 Sum_probs=104.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcc---------ccc--------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPE---------FRE-------------- 714 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi--~g~~---------~~~-------------- 714 (950)
.+-+.+.+++++|+++|++++++||++...+..+.+++++..+...++ +|.. +..
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 577889999999999999999999999999999999999875432111 1100 000
Q ss_pred ----------------------C------------------------------------CHHHHhhh---h----c-ccc
Q 002230 715 ----------------------K------------------------------------SDEELSKL---I----P-KIQ 728 (950)
Q Consensus 715 ----------------------~------------------------------------~~~~~~~~---~----~-~~~ 728 (950)
. .++...+. + . ...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 0 00111110 0 0 011
Q ss_pred E------EeecCh--hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 729 V------MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 729 v------~ar~~P--~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
+ +....| .+|...++.++++++ +.++++|||.||.+||+.|++|+||+ ++.+..|+.||+++..++-.
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~ 259 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLED 259 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTT
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcC
Confidence 1 112233 479999999887644 35888999999999999999999999 99999999999999888778
Q ss_pred HHHHHHH
Q 002230 798 TIVTVAK 804 (950)
Q Consensus 798 ~i~~~i~ 804 (950)
++.++++
T Consensus 260 Gv~~~l~ 266 (271)
T d1rkqa_ 260 GVAFAIE 266 (271)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 8888775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.06 E-value=2e-10 Score=121.61 Aligned_cols=68 Identities=32% Similarity=0.413 Sum_probs=61.1
Q ss_pred hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
+|...++.+.+.+| +.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||++...++-.++.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 89999999988766 46889999999999999999999999 9999999999999988888888887753
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=8.4e-11 Score=123.68 Aligned_cols=68 Identities=28% Similarity=0.318 Sum_probs=60.4
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.|++++| +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.||+|+.+++-.++.++|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 469999999987655 35888899999999999999999999 999999999999998888888887775
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.05 E-value=2.3e-10 Score=112.02 Aligned_cols=99 Identities=20% Similarity=0.287 Sum_probs=84.7
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+|+.|++.|+.+.++||+....+...++++++.. ++. ...+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~--~~~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFL--GKLEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEE--SCSCHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------ccc--ccccHHHHHHHHH
Confidence 48999999999999999999999999999999863 333 3446766666655
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~ 795 (950)
+++| +.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+..+.
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCT
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCC
Confidence 5434 67999999999999999999999999 999999999999998765
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=2.5e-10 Score=116.29 Aligned_cols=126 Identities=21% Similarity=0.287 Sum_probs=93.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
+++|++.+.++.|+++|++++++||.....+..+++.+||...+. .-+ +|..... .......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~------------~~~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF------------DETQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE------------CTTSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc------------eeeeeee
Confidence 368999999999999999999999999999999999999964210 000 1111000 0000113
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCcceeecCC-CcHHHHhcCCEEeccCChhHH
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIA-GTEVAKESADVIILDDNFSTI 799 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~AdvGiamg~~-g~~~ak~~aDivl~~~~~~~i 799 (950)
.+..|..+++.++++.+ +.+.++|||.||++|++.||+++|++.+ ..+..++.||+++.+ |..+
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC--HHHh
Confidence 46789999999986533 4689999999999999999999999733 345677889999854 6543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.97 E-value=2.4e-10 Score=119.58 Aligned_cols=69 Identities=30% Similarity=0.365 Sum_probs=60.8
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
..|...++.|.+++| +.++++|||.||.+||+.|+.|+||+ ++++.+|+.||+|...++-.++.++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 479999998877645 56888899999999999999999999 9999999999999988888889988753
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.95 E-value=7.1e-10 Score=116.91 Aligned_cols=67 Identities=24% Similarity=0.277 Sum_probs=55.5
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC-hhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN-FSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~-~~~i~~~i 803 (950)
..|...++.+.+.++ +.|+++|||.||.+||+.||+|+||+ ++.+.+|+.||+++..++ -..+.+++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 478888888776644 46899999999999999999999999 999999999999997554 34455555
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.92 E-value=1.2e-09 Score=114.78 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=59.9
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| ..|+++|||.||.+||+.||+|+||+ ++.+.+|+.||+++.+++-.++..+++
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 479999998877645 35778899999999999999999999 999999999999999888888888764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=1.1e-09 Score=111.81 Aligned_cols=144 Identities=13% Similarity=0.078 Sum_probs=104.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+... +.....+...... ...+.....++.+|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 4689999999999999999999999999999999999997542 1111111111100 000111244567899
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH-HHhcCCEEeccCChhHHHHHHHHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-AKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~-ak~~aDivl~~~~~~~i~~~i~~gR~~~~~ 812 (950)
.|..+++.++.. ++.|+|+||+.||.+|+++||+++|++ ...+. .++..+++. -++|..|...+++-....+.
T Consensus 149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~ 222 (226)
T d2feaa1 149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEW 222 (226)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHH
Confidence 999999999887 889999999999999999999999998 44444 444455544 45799998877665444433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.78 E-value=1.2e-08 Score=101.61 Aligned_cols=129 Identities=17% Similarity=0.127 Sum_probs=93.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+..++....++.+ +.+.+...+|+.............++.......+..... ..........+..+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS------------DRVVGYQLRQKDPKR 135 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT------------SCEEEEECCSSSHHH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc------------cccccccccchhhHH
Confidence 4455666667665 578999999999999999999999986421111100000 011133345566667
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
..++.++.. .+.|+++|||.||++||+.||+||||+ ++.++.++++|++.. +++..+++.+.
T Consensus 136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~ 197 (206)
T d1rkua_ 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHH
T ss_pred HHHHHhccc-ccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHH
Confidence 777777777 788999999999999999999999996 777888888999875 46888887654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.71 E-value=7.2e-09 Score=103.41 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=92.9
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEe--ecCh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~~P 735 (950)
..++.+++.+.++.++..|..+.++||.....+....++.++...-...+...... ...... -..+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 140 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------LTGDVEGEVLKE 140 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------EEEEEECSSCST
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------cccccccccccc
Confidence 44778899999999999999999999999999999999988764211111110000 000000 1122
Q ss_pred hhHHHHHHHHhhhC---CCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~---g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
..|...++.+.+.. .+.++++|||.||.+|++.||+|||| ++.+..++.||+++.++|+..|.++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 141 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 33444444333221 34678889999999999999999999 57888899999999888888887654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.69 E-value=2.1e-08 Score=103.27 Aligned_cols=141 Identities=15% Similarity=0.170 Sum_probs=96.1
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCccccc---------------C------------
Q 002230 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFRE---------------K------------ 715 (950)
Q Consensus 664 ~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi-~g~~~~~---------------~------------ 715 (950)
+..+++.++++.|+.+.++||++...+..+.+++++..+...+- .|..+.. .
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 44556667788899999999999999999999999865422110 1111100 0
Q ss_pred ------------------------CH---HHHhhhh----cccc--------EEeecChhhHHHHHHHHhhhCC---CEE
Q 002230 716 ------------------------SD---EELSKLI----PKIQ--------VMARSSPMDKHTLVKHLRTTLG---EVV 753 (950)
Q Consensus 716 ------------------------~~---~~~~~~~----~~~~--------v~ar~~P~~K~~~V~~l~~~~g---~~v 753 (950)
.+ +++.+.. .... +-.-....+|...++.+.+.+| +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 00 1111111 1111 1112334689999999988766 457
Q ss_pred EEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC-------EEeccCChhHHHHHHHH
Q 002230 754 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 805 (950)
Q Consensus 754 ~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD-------ivl~~~~~~~i~~~i~~ 805 (950)
.++|||.||.+||+.||.|++|| ++.+..|+.|| ++-..++..++.+++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 88899999999999999999999 88888888887 55556667778877654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.65 E-value=3.2e-08 Score=101.27 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=39.3
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~ 701 (950)
.+...+.++++|++|+++|++++++||++...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34456778999999999999999999999999999999999864
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.41 E-value=4.8e-07 Score=91.31 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=38.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
..+.+.+.+++++|+++|+.++++||++...+..+.+++|+.
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 346788999999999999999999999999999999999985
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.99 E-value=2.2e-06 Score=86.00 Aligned_cols=61 Identities=18% Similarity=0.377 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+|...++.|.++ .+ ++++||+.||.+||+.|+.|+||+ +|. ++.+|++.+.+ ...+.+++
T Consensus 158 ~~Kg~al~~l~~~-~~-~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RP-AIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTT-SC-EEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhcc-cc-ceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcCC--HHHHHHHH
Confidence 6899999999876 44 667799999999999997776665 332 25678999854 44554444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.97 E-value=5.1e-07 Score=91.50 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=48.2
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhcCC-cceeecCCCcHHHHhcCCEEe
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVII 791 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~Ad-vGiamg~~g~~~ak~~aDivl 791 (950)
..|...++.|.+...+.|.++|| |.||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 68999999997764578899999 569999999997 699999 99999999999875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.65 E-value=4e-05 Score=76.91 Aligned_cols=125 Identities=18% Similarity=0.211 Sum_probs=83.9
Q ss_pred CCccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec-ChhhH
Q 002230 661 MRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS-SPMDK 738 (950)
Q Consensus 661 lr~~~~~~I~~l~~aG-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~-~P~~K 738 (950)
+-||+.+.+++|++.| +++.++|+.....+..+.+..|+..--+.++.+.+. ..+- .|..-
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~k~~p~~~ 154 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDA-----------------LDRNELPHIA 154 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTC-----------------SSGGGHHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccccccccccc-----------------ccccchhHHH
Confidence 4589999999999987 899999999999999999999997533333333221 1110 11111
Q ss_pred HHHHHHHhhh--CCCEEEEEcCCccCHHhhhcCCc---ceeecCCCcH-HHHhcCCEEeccCChhHHHHHHH
Q 002230 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTE-VAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 739 ~~~V~~l~~~--~g~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~-~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
...++.+... ..+.++||||+.+|..|-+.|++ +|+.|....+ ..+..+|+++. ++..+.+++.
T Consensus 155 ~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 155 LERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred HHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 2223333221 12578999999999999999995 4555533333 24556899984 5888887764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.51 E-value=5.8e-05 Score=75.03 Aligned_cols=125 Identities=22% Similarity=0.297 Sum_probs=86.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+.....+..+.+++||..--..++.+.+.. .....|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP----------------EIKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS----------------SCTTSSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccc----------------cccccchhhH
Confidence 457999999999999999999999999999999999999975322333322211 0122334344
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceee--cCC-CcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giam--g~~-g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.++-. .+.++|+||..+|..+-+.|++ .|.+ |.+ ..+.....+|+++.+ +..+++++
T Consensus 159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKIT 223 (224)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGGT
T ss_pred HHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHhh
Confidence 445555444 5679999999999999999987 3333 312 123455668999854 77776554
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.0001 Score=73.10 Aligned_cols=120 Identities=15% Similarity=0.235 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.++++.|++.|+++.++|+.....+..+.+..|+..--..++.+++.. .+...|+-=.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~----------------~~Kp~~~~~~ 151 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP----------------YSKPHPQVYL 151 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS----------------CCTTSTHHHH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc----------------cchhhHHHHH
Confidence 456999999999999999999999999999999999999965333444443321 1112223234
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCc----HHHHhcCCEEeccCChhHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT----EVAKESADVIILDDNFSTI 799 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~----~~ak~~aDivl~~~~~~~i 799 (950)
.+++.+.-. .+.++|+||+.+|..|-+.|++... +..+. +.....||+++.+ |..+
T Consensus 152 ~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i-~v~~~~~~~~~~~~~a~~~i~~--l~el 211 (218)
T d1te2a_ 152 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSI-VVPAPEAQNDPRFVLANVKLSS--LTEL 211 (218)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEE-ECCCTTTTTCGGGGGSSEECSC--GGGC
T ss_pred HHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEE-EECCCCCccchhhcCCCEEECC--hhhC
Confidence 455555443 4678999999999999999997432 22222 2233568988754 6543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.39 E-value=0.00015 Score=74.02 Aligned_cols=126 Identities=19% Similarity=0.196 Sum_probs=86.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.||+.++++.|++.|+++.++||.+...+..+.+..|+..-. +.++.+++.. .....|..=
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~----------------~~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccc----------------ccccChHHH
Confidence 57899999999999999999999999999999999999986421 2233332211 112234444
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCc------H---------------------HHHhcCCEE
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT------E---------------------VAKESADVI 790 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~------~---------------------~ak~~aDiv 790 (950)
....+.+.-...+.++||||..+|+.+-+.|++- |++. .|. + ..+..||++
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEE
Confidence 5555555433236799999999999999999962 3332 221 0 112238999
Q ss_pred eccCChhHHHHHHH
Q 002230 791 ILDDNFSTIVTVAK 804 (950)
Q Consensus 791 l~~~~~~~i~~~i~ 804 (950)
+-+ +..+..+|+
T Consensus 242 i~~--l~eL~~ii~ 253 (257)
T d1swva_ 242 IET--MQELESVME 253 (257)
T ss_dssp ESS--GGGHHHHHH
T ss_pred ECC--HHHHHHHHH
Confidence 954 888887764
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.29 E-value=0.0004 Score=72.03 Aligned_cols=137 Identities=15% Similarity=0.208 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-cccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++|||+++.++.|++.|+++.++||--.....++++++|+..++..++.. -++.. +.+.--+..- + .....|
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~---~~~~~~~~~~-~---i~~~~K 207 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE---NGVLKGFKGE-L---IHVFNK 207 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT---TSBEEEECSS-C---CCTTCH
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC---CeeEeeccCC-c---cccccC
Confidence 58999999999999999999999999999999999999997654322211 01100 0000000000 0 112233
Q ss_pred HHHH----HHHhhh-CCCEEEEEcCCccCHHhhhc---CCcceeecC-C-CcH----HHHhcCCEEeccCChhHHHHHH
Q 002230 739 HTLV----KHLRTT-LGEVVAVTGDGTNDAPALHE---ADIGLAMGI-A-GTE----VAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 739 ~~~V----~~l~~~-~g~~v~~vGDG~ND~~al~~---AdvGiamg~-~-g~~----~ak~~aDivl~~~~~~~i~~~i 803 (950)
...+ ...+.. ....|.++|||.||..|.+. ++.+++.|- + ..+ .-.++-|||+.+|.-..++..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~i 286 (291)
T d2bdua1 208 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 286 (291)
T ss_dssp HHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHHH
Confidence 3222 111221 13578888999999999874 344444442 1 111 1347789999888766655543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.04 E-value=0.00021 Score=70.19 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+...-+.++.+. ..+..|-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~----------------------~~~~~~p 140 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS----------------------PEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC----------------------SSCCSHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccccccc----------------------ccccccc
Confidence 46789999999998775 899999999999999999999875333332222 2223333
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCc---ceeecCCCcH-HHHhcCCEEeccCChhHHHHH
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTE-VAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~Adv---Giamg~~g~~-~ak~~aDivl~~~~~~~i~~~ 802 (950)
..++...++.| +.++||||+.||..|-+.|++ +|.-|....+ .....+|+++.+ +..+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 33333333323 578899999999999999997 4444422233 334458999854 7776654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=8.8e-05 Score=74.36 Aligned_cols=50 Identities=20% Similarity=0.355 Sum_probs=36.1
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhcCC-cceeecCCCcHHHHhcC
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESA 787 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~Ad-vGiamg~~g~~~ak~~a 787 (950)
.+|...++.|.....+.|+++|| |.||.+||+.|+ .|++++ +..| .++.+
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~-~~~~~ 238 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APED-TRRIC 238 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHH-HHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHH-HHHHH
Confidence 67888888776543578999999 789999999998 688876 5444 34433
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.84 E-value=0.0019 Score=64.22 Aligned_cols=123 Identities=16% Similarity=0.164 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh--
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD-- 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~-- 737 (950)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-..++...+. ....|.-
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~~~ 160 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEA------------------GFFKPHPRI 160 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHH------------------TBCTTSHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccc------------------cccchhhHH
Confidence 46799999999996 58999999999999999999999986432222222111 0122322
Q ss_pred HHHHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCccee-ecC-CCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLA-MGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvGia-mg~-~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
=..+++.+.-. .+.++|+||. .+|+.+-+.|++-.. +.. .........+|+++.+ +..+.++++
T Consensus 161 ~~~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 161 FELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 12333333323 3569999997 689999999988432 211 2222345678999865 888888775
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.72 E-value=0.0027 Score=57.83 Aligned_cols=107 Identities=20% Similarity=0.328 Sum_probs=70.2
Q ss_pred cCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeec
Q 002230 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (950)
Q Consensus 524 ~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (950)
+.||..+|++++|++.+.... ....+.-....||....+..++.+ ++ ..+..|++..+...... .|. .
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~~~~~~~~~----~g~--~ 96 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRE-RDVQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGG--H 96 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCC-CCTTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHHHHHHHHHH----HTC--C
T ss_pred CCchHHHHHHHHHHHhcCCCc-cccccccccccccccccceEEEEE---CC--EEEEecHHHHHHHHHHH----cCC--C
Confidence 679999999999987653221 111233344567777666555433 22 23456888766543321 111 1
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCC
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr 662 (950)
++ ..+.+.++.++.+|..++.+| .|..++|++++.|+++
T Consensus 97 ~~----~~~~~~~~~~~~~G~Tvv~Va----------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 97 FP----TDVDQKVDQVARQGATPLVVV----------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CC----HHHHHHHHHHHHTTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred Cc----HHHHHHHHHHHHCCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence 22 346677889999999999988 4678999999999986
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.0025 Score=61.10 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=75.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHH---------------HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINT---------------AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~t---------------a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (950)
+-|++.++++.|+++|+++.++|...... ........|+... ...+....-... . ....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~cp~~p~~~----~-~~~~ 101 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD-GIYYCPHHPQGS----V-EEFR 101 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCBTTCS----S-GGGB
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc-ceeecccccccc----c-cccc
Confidence 45899999999999999999999876311 1111222222111 000000000000 0 0000
Q ss_pred cccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc--eee--cCCCcHHHHhcCCEEeccCChhHHHH
Q 002230 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG--LAM--GIAGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG--iam--g~~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
....+..-.|.--..+.+.+.-. -+.+.||||..+|..|-+.|+++ +.+ |..-.+.....||+++.+ +..+++
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~dl~~ 178 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLPQ 178 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHHH
T ss_pred ccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HHHHHH
Confidence 00011223333334555555443 35689999999999999999985 322 322234566779999854 888888
Q ss_pred HHH
Q 002230 802 VAK 804 (950)
Q Consensus 802 ~i~ 804 (950)
+|+
T Consensus 179 ~ik 181 (182)
T d2gmwa1 179 AIK 181 (182)
T ss_dssp HHH
T ss_pred Hhc
Confidence 775
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.0015 Score=65.22 Aligned_cols=119 Identities=16% Similarity=0.152 Sum_probs=77.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
-.+.||+.+.+++|++.|+++.++|+............+|+..-........+ . .......|+-=
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d--------------~-~~~~KP~p~~~ 190 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD--------------T-KIGHKVESESY 190 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEEC--------------G-GGCCTTCHHHH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeec--------------c-ccccCCCcHHH
Confidence 35689999999999999999999999999999999999997532110000000 0 01112223222
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee----cCCCcHHHHhcCCEEecc
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILD 793 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam----g~~g~~~ak~~aDivl~~ 793 (950)
....+.+.-. .+.++||||..+|+.+-++||+-... |..........++.++.+
T Consensus 191 ~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 191 RKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp HHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 3444444433 36789999999999999999986544 323333344556777643
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.52 E-value=0.00077 Score=65.76 Aligned_cols=119 Identities=18% Similarity=0.197 Sum_probs=76.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.++++.|++.|+++.++|+... .+..+.+..|+...-+.++..++. ......|+--.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~----------------~~~Kp~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSG----------------FVRKPSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGC----------------CCCTTSSHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccc----------------cccchhHHHHH
Confidence 3579999999999999999999998665 556788889986422222222111 11122333334
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+++.+.-. .+.++||||+.+|..+-+.|++. |.+. .+. ..+|..+. ++..+.+++
T Consensus 145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~--~~~dl~~l~ 201 (204)
T d2go7a1 145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQ--ALADISRIF 201 (204)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECS--STTHHHHHT
T ss_pred HHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecC--CHHHHHHHh
Confidence 445555433 36799999999999999999985 3343 332 23555553 356665543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.50 E-value=0.00039 Score=68.24 Aligned_cols=121 Identities=12% Similarity=0.224 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|+ +++++.++|+.....+..+.+..|+...-..++.+.+.. .....|+--.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 144 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP----------------KRKPDPLPLL 144 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS----------------CCTTSSHHHH
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccccccccccccc----------------cchhhhhhhc
Confidence 35689999999997 479999999999999999999999865322232222211 1112333334
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee---cCCCcHHHHhcCCEEeccCChhHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam---g~~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
.+++.++-. .+.++||||+.+|..+-+.|++.... | .......+.+|.++. ++..|.+
T Consensus 145 ~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll~ 205 (207)
T d2hdoa1 145 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDILE 205 (207)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGGG
T ss_pred ccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHHh
Confidence 444444322 25688999999999999999987543 4 233334567888874 4666543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.15 E-value=0.0038 Score=59.84 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=69.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+++.++.|++.|+++.++|+-+.... .+.+.+|+...-+.++.+++... ....|+--.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~ 141 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK----------------RKPNPESML 141 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC----------------CTTSCHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc----------------cCCCHHHHH
Confidence 4679999999999999999999999776554 56788888643222332222110 011222222
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi 789 (950)
.+.+.+. -+.+.++||..+|..+-++||+-... .++.+-.++..|+
T Consensus 142 ~~~~~~~---~~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 142 YLREKYQ---ISSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHTT---CSSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred HHHHHcC---CCCeEEEeCCHHHHHHHHHcCCEEEE-ECCCCChHhhcCC
Confidence 3333332 14488999999999999999886432 3555656665553
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.11 E-value=0.0029 Score=59.55 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.++++.|++.|+++.++|+-+ ...+..+-+..++...... +.....|..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~-----------------------~~~~~kp~~~ 102 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------REIYPGSKVT 102 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE-----------------------EEESSSCHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee-----------------------eecccCCChH
Confidence 578999999999999999999999654 4566777777776532111 2233333322
Q ss_pred --HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 739 --~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+.+.+.-. .+.++|+||..+|+.+-++|++-
T Consensus 103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCE
T ss_pred HHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCE
Confidence 3333333333 36788999999999999999883
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.96 E-value=0.0011 Score=61.28 Aligned_cols=99 Identities=14% Similarity=0.151 Sum_probs=62.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh--hccccEEe----
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL--IPKIQVMA---- 731 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~--~~~~~v~a---- 731 (950)
+|++.|++.+.++.|+++|++++++||.+......+.+.++... ...... .+....+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~----------------~~~~~~~~~~~~~~~~~~~~ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR----------------KWVEDIAGVPLVMQCQREQG 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH----------------HHHHHTTCCCCSEEEECCTT
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh----------------hhhhhcCCCcEEEeeccccc
Confidence 68899999999999999999999999987422111111110000 000000 00001111
Q ss_pred --ecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 732 --RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 732 --r~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
|..+.-|..+.+.+.....++++|+||...|+.|.+++++-
T Consensus 98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 22345677777777655346788999999999999999885
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.69 E-value=0.013 Score=58.32 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (950)
++.|++.++++.|++ |+++.++|+..........+.+|+...-+.++.+.+.. ...|. -
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------------------~~KP~p~~ 169 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK------------------EEKPAPSI 169 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS------------------SCTTCHHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccc------------------cchhhhhh
Confidence 367999999999985 89999999999999999999999865322333322211 11222 1
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCc-cCHHhhhcCCcceeecCCCc----HHHHhcCCEEeccCChhHHHHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGT----EVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~-ND~~al~~AdvGiamg~~g~----~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
=..+.+.+.-. .+.++|+||.. +|+.+-+.||+.-....++. ......+|+++.+ +..+.++++
T Consensus 170 ~~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHH
T ss_pred HHHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHH
Confidence 12333333322 25688999995 89999999999632211111 1123447898865 888888775
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.94 E-value=0.017 Score=56.14 Aligned_cols=124 Identities=9% Similarity=0.060 Sum_probs=83.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
.+.+++.++++.+++.|+++.++|+-.......+.+..|+...-+.++...+.. .....|+-=.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~----------------~~KP~p~~~~ 156 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ----------------VYKPDNRVYE 156 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT----------------CCTTSHHHHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeee----------------ccccHHHHHH
Confidence 456899999999999999999999999999999999988875444444433321 0112222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC---CCcHHHHhcCCEEeccCChhHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~---~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
.+.+.+.-. .+.++||||..+|+.+-++||+-...-. ...+-....+|+++.+ +..+.++
T Consensus 157 ~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~l 219 (220)
T d1zrna_ 157 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVEL 219 (220)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTT
T ss_pred HHHHHhCCC-CceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHhh
Confidence 344444433 3569999999999999999998744321 1122234558998844 7777653
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.73 E-value=0.054 Score=52.45 Aligned_cols=139 Identities=19% Similarity=0.285 Sum_probs=92.9
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccC--C------------------HHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREK--S------------------DEEL 720 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~--~------------------~~~~ 720 (950)
+-||+.++++.+++. ....++|--..+-..++|+..|+.. ..--+.-+++.+ . -+++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~--e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel 158 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG--ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 158 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS--EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc--eeecccccccccCCChHHHHHHHHHhhhccCccHHHH
Confidence 358999999999887 7888888888999999999999952 222222222211 1 1122
Q ss_pred hh-------------hhccccEEeecChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCc--ceeecCCCcHHHH
Q 002230 721 SK-------------LIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADI--GLAMGIAGTEVAK 784 (950)
Q Consensus 721 ~~-------------~~~~~~v~ar~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~Adv--Giamg~~g~~~ak 784 (950)
.+ ++..++..+ -..|..+++..-...+ ...+.+||++.|..||+.|.= |+|+.-||.+-+-
T Consensus 159 ~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal 235 (308)
T d1y8aa1 159 FRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYAL 235 (308)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHH
T ss_pred HHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccc
Confidence 11 112222222 1566666665443313 234788999999999998832 6666668999999
Q ss_pred hcCCEEeccCChhHHHHHHHH
Q 002230 785 ESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 785 ~~aDivl~~~~~~~i~~~i~~ 805 (950)
..||+.+...+-..+..++..
T Consensus 236 ~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 236 KHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TTCSEEEECSSTHHHHHHHHH
T ss_pred cccceEEeccchhHHHHHHHH
Confidence 999999998887777766543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.63 E-value=0.011 Score=59.36 Aligned_cols=36 Identities=17% Similarity=0.235 Sum_probs=29.7
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~ 697 (950)
=|++.++|+.|+++|++++++|+....+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378999999999999999999987766666665543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.24 E-value=0.015 Score=56.15 Aligned_cols=88 Identities=18% Similarity=0.232 Sum_probs=62.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC--
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS-- 734 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~-- 734 (950)
+-|++.+.++.+++.|++|+.+||+. ..|++.+.+.+|+...+.. -.++.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~---------------------~vll~~~~~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN---------------------PVIFAGDKPG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC---------------------CCEECCCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc---------------------ceEeeCCCCC
Confidence 45799999999999999999999985 4677777778898643210 00222222
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-cee
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLA 774 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Gia 774 (950)
...|...++. -++++++||..+|..+-.+|++ +|-
T Consensus 146 K~~rr~~Ik~-----y~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 146 QNTKSQWLQD-----KNIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp CCCSHHHHHH-----TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHHH-----cCeEEEecCCHHHHhHHHHcCCCceE
Confidence 2445555542 3689999999999999999986 443
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.10 E-value=0.015 Score=56.64 Aligned_cols=111 Identities=12% Similarity=0.114 Sum_probs=72.6
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
..++-||+.+.++.|++.|+++.++|+... +....+..|+...-..++.+.+.. ...|.-
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~------------------~~KP~~ 148 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVA------------------ASKPAP 148 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSS------------------SCTTST
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccc------------------ccccCh
Confidence 345678999999999999999999999764 567888889875433444433311 123322
Q ss_pred H--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceeecCCCcHHHHhcCCEEec
Q 002230 738 K--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIIL 792 (950)
Q Consensus 738 K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giamg~~g~~~ak~~aDivl~ 792 (950)
. ..+.+.+.-. .+.++||||..+|+.+-+.|++ .|.++ .+ .....++.++.
T Consensus 149 ~~~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 149 DIFIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEES
T ss_pred HHHHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcC
Confidence 2 2233333322 3568899999999999999997 44444 22 23344666654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.08 E-value=0.099 Score=52.24 Aligned_cols=41 Identities=15% Similarity=0.091 Sum_probs=31.7
Q ss_pred CccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 002230 662 RPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TG---D~~~ta~~ia~~~gi~~~ 702 (950)
=|++.++++.|++.|++++++|. ..........+++|+...
T Consensus 25 i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~ 68 (261)
T d1vjra_ 25 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 68 (261)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred CchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccc
Confidence 37999999999999999999985 445555555667787543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.02 E-value=0.052 Score=52.49 Aligned_cols=105 Identities=12% Similarity=0.163 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
.++|++.+.++.|+++|+++.++|+- ............|+..--+.++.+++.. .....|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~----------------~~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVG----------------MIKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHS----------------CCTTCH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhcc----------------CCCCCh
Confidence 46799999999999999999999963 3334445555566543222222222110 112344
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceeecCCCcHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEV 782 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giamg~~g~~~ 782 (950)
+--....+.++-. .+.++||||..+|+.+-+.|++ +|-+. ++.+.
T Consensus 161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 4445566666555 4568899999999999999997 44443 44443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.64 E-value=0.039 Score=55.15 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=31.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TG---D~~~ta~~ia~~~gi~~ 701 (950)
+.+=|++.++|+.|+++|++++++|+ .........-+++|+..
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 33337899999999999999999985 44455555556678754
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.44 E-value=0.078 Score=51.42 Aligned_cols=25 Identities=36% Similarity=0.538 Sum_probs=23.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTG 684 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TG 684 (950)
.+-|++.++++.|+++|+++.++|-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 4679999999999999999999995
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.43 E-value=0.0019 Score=51.81 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=49.7
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (950)
+..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+..++.+.++++||++..
T Consensus 14 C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~l 70 (72)
T d2aw0a_ 14 CNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPL--LTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp SHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTSEEEE
T ss_pred cHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcEe
Confidence 4578889999999999999999999999999999766 56677888999999998753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.25 E-value=0.24 Score=48.31 Aligned_cols=123 Identities=11% Similarity=0.102 Sum_probs=81.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh-
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~- 737 (950)
.++.|++.+++++|+ |+.+.++|..+...+..+-+..|+...-+.++.+.+.. +..|.-
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~------------------~~KP~p~ 151 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR------------------VFKPHPD 151 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------------------CCTTSHH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccccccccc------------------ccCccHH
Confidence 356688999999885 78999999999999999999999876444444443321 123332
Q ss_pred -HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCcHH-------------------------HHhcCCEE
Q 002230 738 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV-------------------------AKESADVI 790 (950)
Q Consensus 738 -K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~~~-------------------------ak~~aDiv 790 (950)
=..+++.+.-. .+.++||||..+|+.+-++||+- |.+.-.+.+. .....|++
T Consensus 152 ~f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 152 SYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEE
Confidence 12334444433 35689999999999999999864 2221111110 01247999
Q ss_pred eccCChhHHHHHHH
Q 002230 791 ILDDNFSTIVTVAK 804 (950)
Q Consensus 791 l~~~~~~~i~~~i~ 804 (950)
+.+ +..++.+++
T Consensus 231 i~~--l~el~~lv~ 242 (245)
T d1qq5a_ 231 VPA--LGDLPRLVR 242 (245)
T ss_dssp ESS--GGGHHHHHH
T ss_pred ECC--HHHHHHHHH
Confidence 954 999988775
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=92.20 E-value=0.0029 Score=50.04 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=49.2
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (950)
+..|..+.|+.+.+.+++.+++|++.+.++.+.|++. ..+..++.+.++.+||.+.
T Consensus 11 C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~ 66 (68)
T d1cpza_ 11 CNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEA--NVQATEICQAINELGYQAE 66 (68)
T ss_dssp SSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHTTSSCEE
T ss_pred cHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcE
Confidence 4578889999999999999999999999999999765 5667789999999999764
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.86 E-value=0.0046 Score=51.07 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=51.3
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (950)
+..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+...+.+.++.+||.+...+
T Consensus 20 C~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~--~~~~~~i~~~I~~~Gy~a~~~~ 78 (84)
T d1q8la_ 20 CHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPH--LISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp TCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTT--TCCHHHHHHHHHHTTCCEECSC
T ss_pred cHHHHHHHHHHHhcCCCceEEEEECCCCEEceeeccc--ccCHHHHHHHHHHhCCccEEcC
Confidence 4578899999999999999999999999999999876 5667788899999999776543
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=90.70 E-value=0.0055 Score=48.47 Aligned_cols=56 Identities=11% Similarity=0.166 Sum_probs=49.1
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (950)
+..|..+.|+.+.+.+++.+++|++...++.+.|++. ..+..++...++..||++.
T Consensus 13 C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 13 CQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDAD--KVSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHTTCEEC
T ss_pred CHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHHhCCccc
Confidence 4568889999999999999999999999999999765 5667788899999999864
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.68 E-value=0.14 Score=49.29 Aligned_cols=121 Identities=11% Similarity=0.151 Sum_probs=75.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-eeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
.+.|++.+.+++|+ .+..++|+-....+..+-+.+|+...-. .+..+.+. -..+..|...
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL----------------GADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHH----------------CTTCCTTSSH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccc----------------cccccccCHH
Confidence 35678888777664 5567999999999999999999975311 11111100 0012233322
Q ss_pred --HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCc--------HHHHhcCCEEeccCChhHHHHHH
Q 002230 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT--------EVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 739 --~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~--------~~ak~~aDivl~~~~~~~i~~~i 803 (950)
....+.+.-. .+.++||||..+|+.+-+.|++- |.+. .|. +.....||+++.+ +..+..++
T Consensus 146 ~~~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll 217 (222)
T d2fdra1 146 IFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 217 (222)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HHHHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence 3334444333 36799999999999999999973 3332 221 1233459999965 77777665
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=90.63 E-value=0.17 Score=50.35 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=26.6
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~ 695 (950)
=|++.++|+.|+++|++++++|+....+...+++
T Consensus 20 i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~ 53 (253)
T d1wvia_ 20 IPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQE 53 (253)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 4899999999999999999999755444444443
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=90.31 E-value=0.0049 Score=49.24 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=49.9
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (950)
+..|..+.|+.+.+.+++..++|++...++.+.|++. ..+..++.+.+++.||.+..
T Consensus 14 C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~a~v 70 (72)
T d1osda_ 14 CSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDA--KTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp STTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETT--TCCHHHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHhcCCCeEe
Confidence 5578889999999999999999999999999999765 56678888999999998764
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=89.67 E-value=0.0058 Score=48.80 Aligned_cols=55 Identities=13% Similarity=0.198 Sum_probs=47.8
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCccc
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQI 98 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 98 (950)
++.|..+.|+.+.+.+++.+++|++.++++.+.|++. ..+...+...++++||.+
T Consensus 17 C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~--~~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 17 CAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPA--ETGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp SSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTT--TSCHHHHHHHHHHHTCEE
T ss_pred cHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHHhCCcc
Confidence 4578889999999999999999999999999999765 566778888889999975
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=89.30 E-value=0.0047 Score=50.36 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=51.5
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDEL 103 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 103 (950)
++.|....|+.+...+++.++.|++.+.++.+.|++. ..+..++...++.+||.+.....
T Consensus 13 C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~~~~~~~ 72 (79)
T d1p6ta2 13 CAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPK--EASVSDLKEAVDKLGYKLKLKGE 72 (79)
T ss_dssp SSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTT--TCCHHHHHHHHHHHTCCEEESCS
T ss_pred cHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCC--CCCHHHHHHHHHHHCCceEECCc
Confidence 5578889999999999999999999999999999765 56778899999999998765433
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.98 E-value=0.0062 Score=48.63 Aligned_cols=57 Identities=7% Similarity=0.148 Sum_probs=49.0
Q ss_pred hhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 002230 41 FTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (950)
Q Consensus 41 ~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (950)
.+..|....|+.+.+.+++..++||+.++++.+.|++. .+..++...++.+||.+..
T Consensus 12 ~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~---~~~~~i~~~i~~~Gy~a~~ 68 (72)
T d2ggpb1 12 TCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE---VTADSIKEIIEDCGFDCEI 68 (72)
T ss_dssp CSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSS---CCHHHHHHHHHHTTCCCEE
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC---CCHHHHHHHHHHhCCCeEE
Confidence 35678899999999999999999999999999999643 4567888999999998764
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.61 E-value=0.13 Score=49.12 Aligned_cols=100 Identities=13% Similarity=0.187 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH----HHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~----~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++.|++.+.++.|++.|+++.++|........ ..-...++...-+.++.+.+.. ....+|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~----------------~~KP~~ 162 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG----------------MVKPEP 162 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT----------------CCTTCH
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc----------------cchhHH
Confidence 35789999999999999999999975433222 2222233322111222221100 011122
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceeec
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG 776 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giamg 776 (950)
+-=..+++.+.-. .+.++||||...|+.+-++|++ +|.+.
T Consensus 163 ~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 163 QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 2223444444433 2567899999999999999998 55443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=88.49 E-value=0.073 Score=49.36 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=23.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD 685 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD 685 (950)
.+-|++.++++.|++.|+++.++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 35689999999999999999999974
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.22 E-value=0.0075 Score=49.08 Aligned_cols=59 Identities=14% Similarity=0.169 Sum_probs=51.0
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (950)
++.|....|+.+++.+++.+++|++.+.++.+.|++. ..+...+...++++||++...+
T Consensus 19 C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~GY~~~~~~ 77 (79)
T d1kvja_ 19 CNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPK--LQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp STHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTCEEEECS
T ss_pred cHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhcCCCcEeCC
Confidence 4568888999999999999999999999999999765 5677889999999999876543
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.36 E-value=0.01 Score=47.45 Aligned_cols=58 Identities=9% Similarity=0.160 Sum_probs=49.2
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhh
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDEL 103 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 103 (950)
++.|..+.|+.+.+.+++..+.||+.++++.+.+++. ...++...+.++||.+.+.+.
T Consensus 14 C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~----~~~~i~~~i~~~GY~v~~~~~ 71 (73)
T d1mwza_ 14 CAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND----IRAQVESALQKAGYSLRDEQA 71 (73)
T ss_dssp SHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC----CHHHHHHHHHHHTCCCCBCCS
T ss_pred CHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC----CHHHHHHHHHHcCCcccCCCC
Confidence 4578899999999999999999999999999998533 345788889999999987654
|