Citrus Sinensis ID: 002258
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 946 | 2.2.26 [Sep-21-2011] | |||||||
| Q5JPE7 | 1267 | Nodal modulator 2 OS=Homo | yes | no | 0.882 | 0.659 | 0.320 | 1e-116 | |
| Q15155 | 1222 | Nodal modulator 1 OS=Homo | yes | no | 0.882 | 0.683 | 0.319 | 1e-116 | |
| P69849 | 1222 | Nodal modulator 3 OS=Homo | yes | no | 0.882 | 0.683 | 0.320 | 1e-116 | |
| Q6GQT9 | 1214 | Nodal modulator 1 OS=Mus | yes | no | 0.885 | 0.690 | 0.310 | 1e-115 | |
| Q54CU4 | 11103 | Colossin-A OS=Dictyosteli | no | no | 0.294 | 0.025 | 0.268 | 1e-06 | |
| Q99W46 | 1141 | Serine-aspartate repeat-c | yes | no | 0.164 | 0.136 | 0.280 | 0.0004 | |
| Q932F7 | 1141 | Serine-aspartate repeat-c | yes | no | 0.164 | 0.136 | 0.280 | 0.0004 | |
| Q2FJ77 | 1154 | Serine-aspartate repeat-c | N/A | no | 0.164 | 0.135 | 0.280 | 0.0005 | |
| O86489 | 1166 | Serine-aspartate repeat-c | yes | no | 0.164 | 0.133 | 0.280 | 0.0006 | |
| Q5HIB2 | 1166 | Serine-aspartate repeat-c | yes | no | 0.164 | 0.133 | 0.280 | 0.0006 |
| >sp|Q5JPE7|NOMO2_HUMAN Nodal modulator 2 OS=Homo sapiens GN=NOMO2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 308/961 (32%), Positives = 459/961 (47%), Gaps = 126/961 (13%)
Query: 21 SADSIHGCGGFVEASSSLIKSRKATDARLDYSHVTVELRTLDGLVKESTQCAPN-GYYFI 79
S D + GCGGFV++ D ++YS + ++L T G +K T CAPN GY+ I
Sbjct: 32 SEDIVVGCGGFVKS-----------DVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMI 80
Query: 80 PVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTG--CNGNEDINFRFTGFTLLGRVVGAIG 137
P+YDKG F++K+ P GWS+ P V + VD C DINF FTGF++ G+V
Sbjct: 81 PLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKV----- 135
Query: 138 GESCLDKGG--GPSNVNVELLSHSGDL-ISSVITSSEGSYLFKNIIPGKYKLRASHPNLS 194
L KG GP+ V V L + + I S +T G + F ++PG Y++ A+HP +
Sbjct: 136 ----LSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGDYEILATHPTWA 191
Query: 195 VEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIYLYSDDVGKVDC--- 251
++ ST V + N GY + G V + G P+ GV L+S V K D
Sbjct: 192 LK-EASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGC 250
Query: 252 ---PQGSGNALGERKA-LCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVS 307
P E LC+ VS DG F F S+P G Y ++P Y+GE FDV+PS +
Sbjct: 251 NVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRLD 310
Query: 308 MSVRHQHVTVPEKFQVTGFSVGGRVVD--ENDMGVEGVKILVDGHERSITDRDGYYKLDQ 365
+V H + + F V GFSV GRV++ E D GV + ++ + T DG ++L+
Sbjct: 311 FTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGD-GVPEAVVTLNNQIKVKTKADGSFRLEN 369
Query: 366 VTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICG---VVR---TVGSGNK 419
+T+ YTI A K H F + + PN +ADI A + +CG ++R TV NK
Sbjct: 370 ITTGTYTIHAQKEHLYFETVT-IKIAPNTPQLADIVATGFSVCGRISIIRFPDTVKQMNK 428
Query: 420 VKVALTHGPDKVKPQVK-QTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLP-PYADV 477
KV L+ DK K V +TD +G+FCF+ PG Y++ M E+ +G+ P +
Sbjct: 429 YKVVLS-SQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLT 487
Query: 478 VVKSPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTD--DS 535
V P++++ F Q L +V G V+C + CG L+ VTL L ++ EK+++ L+ ++
Sbjct: 488 VTDRPVMDVAFVQFLASVSGKVSCLDTCGDLL-VTLQSLSRQ----GEKRSLQLSGKVNA 542
Query: 536 DQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLN 595
F F +VLPGKY++ + M ++WCW+ + V+V +DV VEF Q GY L
Sbjct: 543 MTFTFDNVLPGKYKISI---------MHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLR 593
Query: 596 VISTHDVDAYMTQQDGSHVPLKV---KKGSQHICVESPGVHNLHFVNP--CVFFGSPVLK 650
+H + Q + + KG C+ PGV+ V P C F
Sbjct: 594 CSLSHAITLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYK---VTPRSCHRFEQAFYT 650
Query: 651 MDTSNPSPIYLKGEKYQLRGHI--------NVQSRSPI------------GVHEL-PENI 689
DTS+PS + L ++ + G I V +S I V EL E
Sbjct: 651 YDTSSPSILTLTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQ 710
Query: 690 IVDILNGDGSISNRTTATLTSPANDQTSYAV------------YGFSLWANLGDQLTFVP 737
+ +I + R T V Y FS WA G+++T P
Sbjct: 711 LAEI---EARRQEREKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTP 767
Query: 738 RDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSVSPPLSGVNIRIIAA 797
K++LFYP + V+ + C + G+ GL+ EG + P L GV I I +
Sbjct: 768 ------SSKELLFYPPSMEAVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVI--S 819
Query: 798 EDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQVGPN--SFSCQ 855
E + L + T G++ GPL+ D+ Y V + K GY L V F
Sbjct: 820 EKGASSPL------ITVFTDDKGAYSVGPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAY 873
Query: 856 KLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLL 915
L+ +S I ++DD +P+P VLLSLSG +R+N ++ G F NL PG +Y +P++
Sbjct: 874 ALAGVSFEIKAEDD--QPLPGVLLSLSGGL-FRSNLLTQDNGILTFSNLSPGQYYFKPMM 930
Query: 916 K 916
K
Sbjct: 931 K 931
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May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning, via its interaction with NCLN. Homo sapiens (taxid: 9606) |
| >sp|Q15155|NOMO1_HUMAN Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5 | Back alignment and function description |
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| >sp|P69849|NOMO3_HUMAN Nodal modulator 3 OS=Homo sapiens GN=NOMO3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6GQT9|NOMO1_MOUSE Nodal modulator 1 OS=Mus musculus GN=Nomo1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54CU4|COLA_DICDI Colossin-A OS=Dictyostelium discoideum GN=colA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q99W46|SDRE_STAAN Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain N315) GN=sdrE PE=1 SV=1 | Back alignment and function description |
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| >sp|Q932F7|SDRE_STAAM Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdrE PE=3 SV=1 | Back alignment and function description |
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| >sp|Q2FJ77|SDRE_STAA3 Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain USA300) GN=sdrE PE=3 SV=1 | Back alignment and function description |
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| >sp|O86489|SDRE_STAAE Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain Newman) GN=sdrE PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5HIB2|SDRE_STAAC Serine-aspartate repeat-containing protein E OS=Staphylococcus aureus (strain COL) GN=sdrE PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 946 | ||||||
| 255548409 | 1198 | carboxypeptidase regulatory region-conta | 0.966 | 0.762 | 0.741 | 0.0 | |
| 225437598 | 1199 | PREDICTED: nodal modulator 1 [Vitis vini | 0.966 | 0.762 | 0.742 | 0.0 | |
| 449436411 | 1199 | PREDICTED: nodal modulator 2-like [Cucum | 0.964 | 0.760 | 0.691 | 0.0 | |
| 356572803 | 1195 | PREDICTED: nodal modulator 1-like [Glyci | 0.956 | 0.757 | 0.705 | 0.0 | |
| 356503940 | 1195 | PREDICTED: nodal modulator 1-like [Glyci | 0.956 | 0.757 | 0.704 | 0.0 | |
| 297821142 | 1225 | hypothetical protein ARALYDRAFT_486740 [ | 0.952 | 0.735 | 0.664 | 0.0 | |
| 15228737 | 1227 | carbohydrate-binding-like fold-containin | 0.952 | 0.734 | 0.660 | 0.0 | |
| 357128074 | 1203 | PREDICTED: nodal modulator 1-like [Brach | 0.941 | 0.740 | 0.577 | 0.0 | |
| 125525541 | 1193 | hypothetical protein OsI_01543 [Oryza sa | 0.936 | 0.742 | 0.579 | 0.0 | |
| 125570055 | 1193 | hypothetical protein OsJ_01438 [Oryza sa | 0.936 | 0.742 | 0.579 | 0.0 |
| >gi|255548409|ref|XP_002515261.1| carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis] gi|223545741|gb|EEF47245.1| carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1430 bits (3702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/916 (74%), Positives = 783/916 (85%), Gaps = 2/916 (0%)
Query: 1 MKSRDTLTYLLIIIYSIAAVSADSIHGCGGFVEASSSLIKSRKATDARLDYSHVTVELRT 60
MK RD L Y I++YS + SADSIHGCGGFVEASSSLIKSRK+TD +LDYS +TVELRT
Sbjct: 1 MKIRDALLYFSILLYSFSFASADSIHGCGGFVEASSSLIKSRKSTDTKLDYSDITVELRT 60
Query: 61 LDGLVKESTQCAPNGYYFIPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDIN 120
+DGLVKE TQCAPNGYYFIPVYDKGSFVIK++GPEGWSW+P+ V V VDDTGCN NEDIN
Sbjct: 61 VDGLVKERTQCAPNGYYFIPVYDKGSFVIKISGPEGWSWDPESVPVIVDDTGCNHNEDIN 120
Query: 121 FRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNII 180
FRFTGFTL GRV+GA+GGESCL K GGPSNVNVELLS S D ISSV+TS+ GSY F NII
Sbjct: 121 FRFTGFTLSGRVMGAVGGESCLVKSGGPSNVNVELLSPSDDFISSVLTSATGSYSFNNII 180
Query: 181 PGKYKLRASHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIY 240
PGKYK+RASHP+L VEV+GSTEV LGFENG VDDIFF PGY++ G VVAQGNPILGVHI+
Sbjct: 181 PGKYKIRASHPDLKVEVKGSTEVHLGFENGIVDDIFFVPGYDLHGYVVAQGNPILGVHIF 240
Query: 241 LYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFD 300
LYS+DV ++DCPQGSG+A G+R LCHA+SDADG F FKS+PCG+YELVP+YKGENT+FD
Sbjct: 241 LYSEDVVELDCPQGSGDATGQRNPLCHAISDADGMFSFKSLPCGRYELVPYYKGENTLFD 300
Query: 301 VSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGVEGVKILVDGHERSITDRDGY 360
VSP LVS+SV HQHVTVP+KFQVTGFSVGGRV D NDMGVEGVKI+VDGHERS+TD++GY
Sbjct: 301 VSPPLVSVSVEHQHVTVPQKFQVTGFSVGGRVADGNDMGVEGVKIIVDGHERSMTDKEGY 360
Query: 361 YKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTVGSGNKV 420
YKLDQVTSN YTIEA K HY+FN LKEYMVLPNMAS+ADIKAISYD+CGVVR V SG K
Sbjct: 361 YKLDQVTSNHYTIEARKEHYRFNSLKEYMVLPNMASVADIKAISYDVCGVVRMVNSGYKA 420
Query: 421 KVALTHGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVVK 480
KV LTHGP+ VKPQ +QTD +G FCFEV PGEYRLSA AATPES+ G+LFLPPY D+VVK
Sbjct: 421 KVTLTHGPENVKPQARQTDGDGKFCFEVAPGEYRLSAFAATPESAPGLLFLPPYVDLVVK 480
Query: 481 SPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLF 540
SPL+N+EFSQALVNVLG+V CKE+CGP V+VTLMRLG K + E+K+++LTD+SD+FLF
Sbjct: 481 SPLMNVEFSQALVNVLGSVTCKEKCGPSVSVTLMRLGGKRNE--ERKSITLTDESDEFLF 538
Query: 541 RDVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTH 600
+VLPGKYR+EVK +S A+ +DNWCWEQSFI V VG DVKG FVQKGYW+NV+STH
Sbjct: 539 ANVLPGKYRIEVKHSSHGATPDKDNWCWEQSFIDVVVGAEDVKGNLFVQKGYWVNVVSTH 598
Query: 601 DVDAYMTQQDGSHVPLKVKKGSQHICVESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIY 660
D+DAY+TQ D S + LK+KKGSQHICVESPGVH LHF+N C+ F S +K+DTSNPSP+Y
Sbjct: 599 DIDAYLTQPDHSIINLKIKKGSQHICVESPGVHELHFINSCILFASSPMKIDTSNPSPVY 658
Query: 661 LKGEKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSYAV 720
L+GEKY L+G I V+ S G++E P N +VDILNGD S+ + +A L S A+D TS +
Sbjct: 659 LRGEKYLLKGQIKVELSSADGLYEPPNNFVVDILNGDSSVIDGASANLASGASDHTSTGI 718
Query: 721 YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTE 780
Y +S+WANLG++LTFVPRD R N EK+ILFYP++ V V NDGCQA IP FSGR GLY E
Sbjct: 719 YEYSIWANLGEKLTFVPRDSRVNGEKRILFYPKEHNVLVANDGCQASIPVFSGRPGLYIE 778
Query: 781 GSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKP 840
GSVSPPLSGV I+I AAEDS + LKK LALET TG DGSF+GGPLYDDI+Y+VEASKP
Sbjct: 779 GSVSPPLSGVYIKISAAEDSHVTLLKKDDLALETVTGMDGSFVGGPLYDDISYSVEASKP 838
Query: 841 GYYLRQVGPNSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFH 900
GY+L+++GP+SFSCQKL QIS+ IYSKDDA EPIPSVLLSLSGDDGYRNNSVS AGG+F
Sbjct: 839 GYHLKRMGPHSFSCQKLGQISIHIYSKDDANEPIPSVLLSLSGDDGYRNNSVSGAGGTFL 898
Query: 901 FDNLFPGNFYLRPLLK 916
FDNLFPG FYLRPLLK
Sbjct: 899 FDNLFPGTFYLRPLLK 914
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437598|ref|XP_002271147.1| PREDICTED: nodal modulator 1 [Vitis vinifera] gi|297743995|emb|CBI36965.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449436411|ref|XP_004135986.1| PREDICTED: nodal modulator 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356572803|ref|XP_003554555.1| PREDICTED: nodal modulator 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356503940|ref|XP_003520757.1| PREDICTED: nodal modulator 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297821142|ref|XP_002878454.1| hypothetical protein ARALYDRAFT_486740 [Arabidopsis lyrata subsp. lyrata] gi|297324292|gb|EFH54713.1| hypothetical protein ARALYDRAFT_486740 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15228737|ref|NP_191795.1| carbohydrate-binding-like fold-containing protein [Arabidopsis thaliana] gi|7340707|emb|CAB82950.1| putative protein [Arabidopsis thaliana] gi|332646822|gb|AEE80343.1| carbohydrate-binding-like fold-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357128074|ref|XP_003565701.1| PREDICTED: nodal modulator 1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|125525541|gb|EAY73655.1| hypothetical protein OsI_01543 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|125570055|gb|EAZ11570.1| hypothetical protein OsJ_01438 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 946 | ||||||
| TAIR|locus:2096049 | 1227 | AT3G62360 [Arabidopsis thalian | 0.571 | 0.440 | 0.636 | 0.0 | |
| RGD|1305240 | 1214 | Nomo1 "nodal modulator 1" [Rat | 0.643 | 0.501 | 0.342 | 2.9e-118 | |
| MGI|MGI:2385850 | 1214 | Nomo1 "nodal modulator 1" [Mus | 0.643 | 0.501 | 0.336 | 6.8e-117 | |
| UNIPROTKB|F1NZW1 | 1215 | PM5 "Uncharacterized protein" | 0.644 | 0.502 | 0.330 | 7.8e-114 | |
| UNIPROTKB|F1PB46 | 1178 | NOMO2 "Uncharacterized protein | 0.635 | 0.510 | 0.333 | 1.4e-112 | |
| ZFIN|ZDB-GENE-040826-3 | 1217 | nomo "nodal modulator" [Danio | 0.652 | 0.506 | 0.329 | 1e-110 | |
| UNIPROTKB|F1Q342 | 1144 | NOMO2 "Uncharacterized protein | 0.610 | 0.505 | 0.329 | 3.3e-106 | |
| UNIPROTKB|P69849 | 1222 | NOMO3 "Nodal modulator 3" [Hom | 0.653 | 0.505 | 0.336 | 2.1e-92 | |
| UNIPROTKB|Q15155 | 1222 | NOMO1 "Nodal modulator 1" [Hom | 0.653 | 0.505 | 0.335 | 2.7e-92 | |
| UNIPROTKB|F1MF76 | 1222 | NOMO2 "Uncharacterized protein | 0.654 | 0.506 | 0.337 | 3.4e-92 |
| TAIR|locus:2096049 AT3G62360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1817 (644.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 352/553 (63%), Positives = 430/553 (77%)
Query: 365 QVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTVGSGNKVKVAL 424
+VTSN+YTI+AVK HYKF+KLK++MVLPNMAS+ DI A+SYDICGVVR GS +K KVAL
Sbjct: 401 KVTSNQYTIDAVKEHYKFDKLKKFMVLPNMASLPDINAVSYDICGVVRMFGSRHKAKVAL 460
Query: 425 THGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVVKSPLL 484
THGP VKPQ+K TD G FCFEVPPGEYRLSA+AATP+ +S +LFLP Y DV VKSPLL
Sbjct: 461 THGPTNVKPQMKLTDETGAFCFEVPPGEYRLSALAATPKGASELLFLPAYVDVAVKSPLL 520
Query: 485 NIEFSQALVNVLGNVACKERCGPLVTVTLM-RLGQKHYDGTEKKTVSLTDDSDQFLFRDV 543
NIEFSQA VNV G+V CKE+CGP V+V L+ G + +KKTV LTD+S QFLF D+
Sbjct: 521 NIEFSQARVNVHGSVTCKEKCGPSVSVVLVGAAGDR-----DKKTVVLTDESSQFLFSDI 575
Query: 544 LPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVD 603
LPGKYR+EVK S EA+S ED+WCW++S I V+VGT D+KG+EFVQKGYW+N+ISTH+VD
Sbjct: 576 LPGKYRVEVKSISPEAASDEDSWCWDRSSIDVNVGTEDIKGIEFVQKGYWINIISTHEVD 635
Query: 604 AYMTQQDGSHVPLKVKKGSQHICVESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIYLKG 663
A + DGS LK+KKGSQ IC+ESPG H L + C+ FGS +K+D SNP PI+LK
Sbjct: 636 ARIAHPDGSPTSLKIKKGSQKICIESPGGHELQLSDSCMSFGSNSIKIDVSNPQPIHLKA 695
Query: 664 EKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSYAVYGF 723
EKY L+G INV+S S I EL EN IVDI + G++ N A L S + VY +
Sbjct: 696 EKYLLKGLINVESSSTIE-SELQENFIVDIQDKKGNVINTIAAKLASDGS-----GVYEY 749
Query: 724 SLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSV 783
WA+LG++++FVP+D RGN EKK+LFYP++ V+ DGCQA + F+GRLGLY +GSV
Sbjct: 750 YTWASLGEKISFVPQDSRGNVEKKMLFYPKEIHAVVSKDGCQASVSPFTGRLGLYIQGSV 809
Query: 784 SPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYY 843
SPPL GVNI+I AA+DS I+SLKKG +A+ETST + GSF+ GPLYDDI Y EASKPGY+
Sbjct: 810 SPPLPGVNIKIFAAKDSLISSLKKGEIAIETSTLSAGSFVAGPLYDDIPYATEASKPGYH 869
Query: 844 LRQVGPNSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDN 903
++++GP SFSCQKL QISVR+ SKD+A IP +LLSLSGD GYRNNS+S AGG F FD+
Sbjct: 870 IKRLGPYSFSCQKLGQISVRVNSKDNAETSIPPLLLSLSGDHGYRNNSISGAGGLFVFDS 929
Query: 904 LFPGNFYLRPLLK 916
LFPGNFYLRPLLK
Sbjct: 930 LFPGNFYLRPLLK 942
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| RGD|1305240 Nomo1 "nodal modulator 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2385850 Nomo1 "nodal modulator 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NZW1 PM5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PB46 NOMO2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040826-3 nomo "nodal modulator" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1Q342 NOMO2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P69849 NOMO3 "Nodal modulator 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q15155 NOMO1 "Nodal modulator 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MF76 NOMO2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 946 | |||
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 4e-07 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 6e-06 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 2e-04 |
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 4e-07
Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 10/81 (12%)
Query: 127 TLLGRVVGAIGGESCLDKGGGP-SNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYK 185
T+ G V D G P V L + + T ++G + + PG Y
Sbjct: 1 TISGTVT---------DASGAPIPGATVTLTNADTGTVRGTTTDADGRFSLTGLPPGTYT 51
Query: 186 LRASHPNLSVEVRGSTEVELG 206
L S P + V G
Sbjct: 52 LTVSAPGYKSQTVKDVTVTAG 72
|
Length = 81 |
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 946 | |||
| KOG1948 | 1165 | consensus Metalloproteinase-related collagenase pM | 100.0 | |
| KOG1948 | 1165 | consensus Metalloproteinase-related collagenase pM | 100.0 | |
| COG4932 | 1531 | Predicted outer membrane protein [Cell envelope bi | 99.95 | |
| COG4932 | 1531 | Predicted outer membrane protein [Cell envelope bi | 99.92 | |
| PF13620 | 82 | CarboxypepD_reg: Carboxypeptidase regulatory-like | 98.93 | |
| PF13620 | 82 | CarboxypepD_reg: Carboxypeptidase regulatory-like | 98.9 | |
| PF13715 | 88 | DUF4480: Domain of unknown function (DUF4480) | 98.27 | |
| PF05738 | 70 | Cna_B: Cna protein B-type domain; InterPro: IPR008 | 98.24 | |
| PF13715 | 88 | DUF4480: Domain of unknown function (DUF4480) | 98.24 | |
| PF05738 | 70 | Cna_B: Cna protein B-type domain; InterPro: IPR008 | 98.18 | |
| cd03863 | 375 | M14_CPD_II The second carboxypeptidase (CP)-like d | 97.99 | |
| PF07210 | 85 | DUF1416: Protein of unknown function (DUF1416); In | 97.98 | |
| cd06245 | 363 | M14_CPD_III The third carboxypeptidase (CP)-like d | 97.86 | |
| cd03865 | 402 | M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C | 97.83 | |
| cd03864 | 392 | M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als | 97.81 | |
| cd03868 | 372 | M14_CPD_I The first carboxypeptidase (CP)-like dom | 97.65 | |
| PF07210 | 85 | DUF1416: Protein of unknown function (DUF1416); In | 97.6 | |
| PF08400 | 134 | phage_tail_N: Prophage tail fibre N-terminal; Inte | 97.57 | |
| PF08400 | 134 | phage_tail_N: Prophage tail fibre N-terminal; Inte | 97.55 | |
| PRK15036 | 137 | hydroxyisourate hydrolase; Provisional | 97.53 | |
| cd03866 | 376 | M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM | 97.52 | |
| cd03858 | 374 | M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub | 97.47 | |
| cd03863 | 375 | M14_CPD_II The second carboxypeptidase (CP)-like d | 97.43 | |
| cd03867 | 395 | M14_CPZ Peptidase M14-like domain of carboxypeptid | 97.37 | |
| cd06245 | 363 | M14_CPD_III The third carboxypeptidase (CP)-like d | 97.22 | |
| cd03864 | 392 | M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als | 97.19 | |
| cd03866 | 376 | M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM | 97.14 | |
| COG2373 | 1621 | Large extracellular alpha-helical protein [General | 97.14 | |
| cd03865 | 402 | M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C | 97.05 | |
| PRK15036 | 137 | hydroxyisourate hydrolase; Provisional | 97.05 | |
| KOG2649 | 500 | consensus Zinc carboxypeptidase [General function | 96.96 | |
| cd03858 | 374 | M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub | 96.88 | |
| cd03868 | 372 | M14_CPD_I The first carboxypeptidase (CP)-like dom | 96.85 | |
| PF14686 | 95 | fn3_3: Polysaccharide lyase family 4, domain II; P | 96.85 | |
| cd00421 | 146 | intradiol_dioxygenase Intradiol dioxygenases catal | 96.75 | |
| cd03869 | 405 | M14_CPX_like Peptidase M14-like domain of carboxyp | 96.67 | |
| PF14686 | 95 | fn3_3: Polysaccharide lyase family 4, domain II; P | 96.62 | |
| TIGR02962 | 112 | hdxy_isourate hydroxyisourate hydrolase. Members o | 96.59 | |
| cd03867 | 395 | M14_CPZ Peptidase M14-like domain of carboxypeptid | 96.55 | |
| TIGR00864 | 2740 | PCC polycystin cation channel protein. Note: this | 96.49 | |
| cd00421 | 146 | intradiol_dioxygenase Intradiol dioxygenases catal | 96.47 | |
| COG3485 | 226 | PcaH Protocatechuate 3,4-dioxygenase beta subunit | 96.28 | |
| PF11974 | 97 | MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I | 96.21 | |
| KOG0518 | 1113 | consensus Actin-binding cytoskeleton protein, fila | 96.15 | |
| COG2373 | 1621 | Large extracellular alpha-helical protein [General | 95.98 | |
| PF00775 | 183 | Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th | 95.92 | |
| PF00775 | 183 | Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th | 95.82 | |
| cd03464 | 220 | 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4- | 95.81 | |
| PF09430 | 123 | DUF2012: Protein of unknown function (DUF2012); In | 95.67 | |
| cd03459 | 158 | 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) | 95.59 | |
| cd03459 | 158 | 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) | 95.58 | |
| TIGR02962 | 112 | hdxy_isourate hydroxyisourate hydrolase. Members o | 95.56 | |
| cd05822 | 112 | TLP_HIUase HIUase (5-hydroxyisourate hydrolase) ca | 95.48 | |
| TIGR02465 | 246 | chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb | 95.48 | |
| TIGR02422 | 220 | protocat_beta protocatechuate 3,4-dioxygenase, bet | 95.43 | |
| cd03463 | 185 | 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4 | 95.39 | |
| TIGR02438 | 281 | catachol_actin catechol 1,2-dioxygenase, Actinobac | 95.35 | |
| cd03460 | 282 | 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz | 95.27 | |
| cd03458 | 256 | Catechol_intradiol_dioxygenases Catechol intradiol | 95.26 | |
| KOG0518 | 1113 | consensus Actin-binding cytoskeleton protein, fila | 95.23 | |
| cd03463 | 185 | 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4 | 95.23 | |
| TIGR02439 | 285 | catechol_proteo catechol 1,2-dioxygenase, proteoba | 95.22 | |
| TIGR02465 | 246 | chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb | 95.2 | |
| PF10670 | 215 | DUF4198: Domain of unknown function (DUF4198) | 95.17 | |
| PF09430 | 123 | DUF2012: Protein of unknown function (DUF2012); In | 95.15 | |
| cd03458 | 256 | Catechol_intradiol_dioxygenases Catechol intradiol | 95.15 | |
| COG3485 | 226 | PcaH Protocatechuate 3,4-dioxygenase beta subunit | 95.14 | |
| cd03462 | 247 | 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) | 95.14 | |
| cd03461 | 277 | 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca | 95.13 | |
| cd05469 | 113 | Transthyretin_like Transthyretin_like. This domain | 94.99 | |
| TIGR02423 | 193 | protocat_alph protocatechuate 3,4-dioxygenase, alp | 94.97 | |
| COG2351 | 124 | Transthyretin-like protein [General function predi | 94.95 | |
| PF10670 | 215 | DUF4198: Domain of unknown function (DUF4198) | 94.94 | |
| cd05821 | 121 | TLP_Transthyretin Transthyretin (TTR) is a 55 kDa | 94.93 | |
| cd03464 | 220 | 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4- | 94.89 | |
| TIGR02439 | 285 | catechol_proteo catechol 1,2-dioxygenase, proteoba | 94.88 | |
| cd03462 | 247 | 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) | 94.82 | |
| TIGR02423 | 193 | protocat_alph protocatechuate 3,4-dioxygenase, alp | 94.78 | |
| PF08308 | 71 | PEGA: PEGA domain; InterPro: IPR013229 This domain | 94.78 | |
| TIGR02438 | 281 | catachol_actin catechol 1,2-dioxygenase, Actinobac | 94.74 | |
| TIGR02422 | 220 | protocat_beta protocatechuate 3,4-dioxygenase, bet | 94.71 | |
| smart00095 | 121 | TR_THY Transthyretin. | 94.6 | |
| PF00576 | 112 | Transthyretin: HIUase/Transthyretin family; InterP | 94.59 | |
| cd03460 | 282 | 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz | 94.38 | |
| cd03461 | 277 | 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca | 94.21 | |
| PF11974 | 97 | MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I | 94.05 | |
| KOG2649 | 500 | consensus Zinc carboxypeptidase [General function | 94.03 | |
| cd03869 | 405 | M14_CPX_like Peptidase M14-like domain of carboxyp | 93.92 | |
| PF00576 | 112 | Transthyretin: HIUase/Transthyretin family; InterP | 93.34 | |
| cd05822 | 112 | TLP_HIUase HIUase (5-hydroxyisourate hydrolase) ca | 92.55 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 92.33 | |
| PF02369 | 100 | Big_1: Bacterial Ig-like domain (group 1); InterPr | 92.09 | |
| KOG3006 | 132 | consensus Transthyretin and related proteins [Lipi | 91.7 | |
| cd05821 | 121 | TLP_Transthyretin Transthyretin (TTR) is a 55 kDa | 91.47 | |
| cd03457 | 188 | intradiol_dioxygenase_like Intradiol dioxygenase s | 91.19 | |
| cd05469 | 113 | Transthyretin_like Transthyretin_like. This domain | 91.18 | |
| PF01060 | 80 | DUF290: Transthyretin-like family; InterPro: IPR00 | 90.83 | |
| smart00634 | 92 | BID_1 Bacterial Ig-like domain (group 1). | 90.64 | |
| smart00095 | 121 | TR_THY Transthyretin. | 90.54 | |
| PF01060 | 80 | DUF290: Transthyretin-like family; InterPro: IPR00 | 90.52 | |
| PF02369 | 100 | Big_1: Bacterial Ig-like domain (group 1); InterPr | 90.16 | |
| TIGR00864 | 2740 | PCC polycystin cation channel protein. Note: this | 89.93 | |
| cd03457 | 188 | intradiol_dioxygenase_like Intradiol dioxygenase s | 89.87 | |
| PF07495 | 66 | Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi | 89.58 | |
| COG2351 | 124 | Transthyretin-like protein [General function predi | 88.41 | |
| COG5266 | 264 | CbiK ABC-type Co2+ transport system, periplasmic c | 87.85 | |
| COG5266 | 264 | CbiK ABC-type Co2+ transport system, periplasmic c | 86.39 | |
| PF11589 | 106 | DUF3244: Domain of unknown function (DUF3244); Int | 86.01 | |
| PF08308 | 71 | PEGA: PEGA domain; InterPro: IPR013229 This domain | 85.19 | |
| cd00222 | 187 | CollagenBindB Collagen-binding protein B domain, m | 84.78 | |
| PF12866 | 222 | DUF3823: Protein of unknown function (DUF3823); In | 84.72 | |
| cd00222 | 187 | CollagenBindB Collagen-binding protein B domain, m | 84.34 | |
| PF10794 | 131 | DUF2606: Protein of unknown function (DUF2606); In | 84.21 | |
| PF07495 | 66 | Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi | 82.53 | |
| PF01190 | 97 | Pollen_Ole_e_I: Pollen proteins Ole e I like; Inte | 81.87 |
| >KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-183 Score=1543.36 Aligned_cols=863 Identities=40% Similarity=0.699 Sum_probs=785.7
Q ss_pred cchhhhhhhhhhhhcccCCCeEEeecceeeeccccccccccCCCCccccceEEEEEeCCCCEEEEEEeCC-CcEEEcCCC
Q 002258 4 RDTLTYLLIIIYSIAAVSADSIHGCGGFVEASSSLIKSRKATDARLDYSHVTVELRTLDGLVKESTQCAP-NGYYFIPVY 82 (946)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~v~gcggfv~~~~~~~~~~~~~d~~i~~sgv~V~L~~~~G~~~~~t~t~~-nG~y~ip~l 82 (946)
--++++||++++..+.+++|+|+||||||| +|++||||.++|+|+|.+|.+|++|+|+| |||||||+|
T Consensus 5 ~~~~vvlLI~ls~~a~~sed~VvgCgGfVk-----------Sd~eidyS~ievkL~Tk~G~lKd~tdcaPsNGYfmIPvY 73 (1165)
T KOG1948|consen 5 CHMGVVLLILLSLLAPGSEDNVVGCGGFVK-----------SDSEIDYSQIEVKLLTKEGHLKDETDCAPSNGYFMIPVY 73 (1165)
T ss_pred eeehhhhhhhhhcccCCceeeEEeccceee-----------cCCccceeeEEEEEEeeccccccccccCCCCceEEEEEe
Confidence 347788899999999999999999999994 89999999999999999999999999999 999999999
Q ss_pred CCccEEEEEEcCCCcccCCceeEEEEcC--CCcCCCceeeEEEeCcEEEeEEEeccCCccccCCCCCCcceEEEEEeCCC
Q 002258 83 DKGSFVIKVNGPEGWSWNPDKVAVTVDD--TGCNGNEDINFRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG 160 (946)
Q Consensus 83 ~~G~Y~l~v~~P~G~~~~p~~v~v~vd~--~~~s~~~dinf~~~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g 160 (946)
++|+|.|++++|.||+|+|++++++||+ |.|+.+.||||.|+||+|+|+|..+. +.+++||.|+|++..+
T Consensus 74 dKGdyiLkIspP~GwsfePd~Vel~vDGktd~Cs~n~DinFhftGFsv~GkVlgaa--------ggGpagV~velrs~e~ 145 (1165)
T KOG1948|consen 74 DKGDYILKISPPAGWSFEPDSVELKVDGKTDACSLNEDINFHFTGFSVRGKVLGAA--------GGGPAGVLVELRSQED 145 (1165)
T ss_pred cCCcEEEEecCCCCccccCceEEEEeccccccccCCCceEEEEeeeeEeeEEeecc--------CCCcccceeecccccC
Confidence 9999999999999999999999999997 79999999999999999999999873 4699999999998754
Q ss_pred cEEEEEEeCCCceEEEccccCceEEEEEecCCceEEeeccEEEEEccCCeeeeeeeeccceEEeEEEeeCCCceeceEEE
Q 002258 161 DLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIY 240 (946)
Q Consensus 161 ~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~~~~~~~v~v~~~~~~v~~~l~v~g~~v~G~V~~~G~Pi~Ga~V~ 240 (946)
.+++|.|+++|+|.|.+++||+|.|+++||.|.+..++++.|++...+..+++.|.+.||++.|+|+++++|+.|+.+.
T Consensus 146 -~iast~T~~~Gky~f~~iiPG~Yev~ashp~w~~~~ag~tvvev~~a~~~va~~f~VsGydl~gsv~s~s~P~~gv~~~ 224 (1165)
T KOG1948|consen 146 -PIASTKTEDGGKYEFRNIIPGKYEVSASHPAWECISAGKTVVEVKNAPVVVAPNFKVSGYDLEGSVRSESMPFVGVVMT 224 (1165)
T ss_pred -cceeeEecCCCeEEEEecCCCceEEeccCcceeEeecCcEEEEeCCCccccCCceEEEeeeeEEEEeccCCcccceEEE
Confidence 4899999999999999999999999999999999877777788877777788999999999999999999999999999
Q ss_pred EEECCCC---cccCCCCCC--CccCc-cceeeEEEecCCceEEECCcCCeeEEEEEEEcCCceEEEecCceEEEEEeccc
Q 002258 241 LYSDDVG---KVDCPQGSG--NALGE-RKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRHQH 314 (946)
Q Consensus 241 L~~~~~~---~~~c~~g~~--~~~~~-g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~ 314 (946)
|+..+.. ..+|..+.. +.+.. ...+|.+++|++|+|.|.++|+|.|++.+.|.+++..||++|..++++|+|++
T Consensus 225 l~s~~v~~~dvpkc~gs~ap~n~~a~e~vslc~~vsd~~G~fsfksvPsGkY~l~a~y~ge~~~fdvSP~~l~v~Vehd~ 304 (1165)
T KOG1948|consen 225 LYSTSVIDLDVPKCVGSEAPLNVPATENVSLCIGVSDPRGRFSFKSVPSGKYYLAASYVGEPKSFDVSPNPLKVVVEHDH 304 (1165)
T ss_pred EEEcccccccCCccccCCCCCCCCcccceeeEEEEEcCCceEEEEEcCCCCEEEEEEecCCceEEEeCCCceeEEEeccc
Confidence 9998753 445654421 22222 23689999999999999999999999999999999999999999999999999
Q ss_pred eeeeceeEEEeeEEEeEEEcC-CCCeeeceEEEEccEEeeEeCCCceEEEcc-cCCceEEEEEEeccceecceeeEEEcc
Q 002258 315 VTVPEKFQVTGFSVGGRVVDE-NDMGVEGVKILVDGHERSITDRDGYYKLDQ-VTSNRYTIEAVKVHYKFNKLKEYMVLP 392 (946)
Q Consensus 315 ~~l~~~f~~~g~sV~G~V~d~-~G~pl~ga~V~l~G~~~~~TD~~G~f~~~~-L~pG~Y~I~a~~~~y~~~~~~~v~v~p 392 (946)
+++++.|+++||+|+|||++. +|.|++||.|.+||+..+.||++|+|+|+| +..|+|+|+|.+++++|++.. +++.|
T Consensus 305 lqi~~ef~vtgfSvtGRVl~g~~g~~l~gvvvlvngk~~~kTdaqGyykLen~~t~gtytI~a~kehlqFstv~-~kv~p 383 (1165)
T KOG1948|consen 305 LQIASEFRVTGFSVTGRVLVGSKGLPLSGVVVLVNGKSGGKTDAQGYYKLENLKTDGTYTITAKKEHLQFSTVH-AKVKP 383 (1165)
T ss_pred eeccceeEEEEEEeeeeEEeCCCCCCccceEEEEcCcccceEcccceEEeeeeeccCcEEEEEeccceeeeeEE-EEecC
Confidence 999999999999999999987 899999999999999999999999999999 789999999999999999995 89999
Q ss_pred CcceeceEEEeeeEEEEEEEEcCCcccEEEEEEeCCCcccceeeeeCCc-eEEEEEEcCeeEEEEEEeeCCCCCCceEEc
Q 002258 393 NMASIADIKAISYDICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDNN-GNFCFEVPPGEYRLSAMAATPESSSGILFL 471 (946)
Q Consensus 393 ~~~~i~dI~~~~~~v~G~V~~~~~~~~a~VtL~~~~~~~~~~~~~Td~~-G~F~f~l~pG~Y~v~~~~~~~e~~~G~~~~ 471 (946)
++++++||++..|+|||+|+... ..+.+.|+....+.+....+|++. |+|||.++||.|+|+++.++++.++|+.|.
T Consensus 384 ntasLpdI~a~~fdiCGqV~~~~--k~~nv~lt~~~s~~k~s~~~t~etdGsfCf~vppG~ytievl~~ta~~aagl~l~ 461 (1165)
T KOG1948|consen 384 NTASLPDITAQKFDICGQVEKSE--KGVNVKLTFTRSDDKRSLEITPETDGSFCFPVPPGLYTIEVLDKTASGAAGLLLT 461 (1165)
T ss_pred CccccccccccceeeeeEEEEcc--ccceeEEEEccCccccccccccccCCceeEEcCCccEEEEEeccCcccccccEee
Confidence 99999999999999999998655 445566654333333334445544 999999999999999999999999999999
Q ss_pred CCeEEEEE-cCcccceEEEEeeeEEEEEEEeccCCCCceEEEEEEcCcccccCCcceeEEEeeCCccEEEcccCCccEEE
Q 002258 472 PPYADVVV-KSPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGKYRL 550 (946)
Q Consensus 472 p~~~~V~V-~~pv~~i~F~q~~a~V~G~V~~~~~~~~~~~VtL~~~~~~~~~~~~~~~~~~t~~~G~f~f~~v~PG~Y~v 550 (946)
|..++++| +.|+++|.|+|++++|+|+|+|++.|+ .+.|+|+..... ....+.++.+++.++|.|+|++||+|++
T Consensus 462 P~~~~veV~~~pv~ni~Fsqfranv~g~lsCl~tCg-~a~vtlq~la~G---q~~~~~vk~td~~~~ftF~nilPGkY~~ 537 (1165)
T KOG1948|consen 462 PRLLEVEVLKNPVTNIRFSQFRANVNGHLSCLGTCG-TATVTLQLLAAG---QTLVRSVKGTDESSVFTFENILPGKYSA 537 (1165)
T ss_pred eeeeeEEeecCcccceehhhhhhccceEEEeccCCC-ceeEEEEecccC---CcceeeEEEEeeccEEEeeccCCcceEE
Confidence 99999999 589999999999999999999999999 789999987332 1244566679999999999999999999
Q ss_pred EEEeeccccccCCCCeeEeeeeEEEEeecCccccceEEEeeeEEEEEecceeeEEEEeeCCCeee---EEecccceeEEe
Q 002258 551 EVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGSHVP---LKVKKGSQHICV 627 (946)
Q Consensus 551 ~v~~~~~~~~~~~~~~cw~~~~~~v~V~~~~~~~i~f~q~Gy~~~i~~sh~~~~~~~~~~~~~~~---~~l~~G~~~~cv 627 (946)
+++ |+++|||++++|+++|.++|+.+|+|+|+|||++|++||+++++|+|+++...+ ++|.||.|+||+
T Consensus 538 ~i~--------d~~~wCwe~ss~~lnV~~~d~~aieFvqkGy~~~iisSH~a~~e~~h~dg~~en~~~lki~kgvn~iCv 609 (1165)
T KOG1948|consen 538 RID--------DNGRWCWEKSSMTLNVEQSDTQAIEFVQKGYAAQIISSHPAEIEWSHADGKQENGKTLKIGKGVNSICV 609 (1165)
T ss_pred Eec--------cCCCceeecceEEEEeecccccccceeeccEEEEEEecCceeeEEecCCCCCCCcceEEecCcceEEEc
Confidence 998 479999999999999999999999999999999999999999999999988776 899999999999
Q ss_pred cCCceeEEEecCCceecCCCceEEeCCCCceeEEEEEEEEEEEEEEEeecCCCccccCCcceEEEEecCCCceecccccc
Q 002258 628 ESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTAT 707 (946)
Q Consensus 628 ~~~G~y~~~~~~sC~~f~~~~~~~~t~~~~~i~l~a~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 707 (946)
++||.|.+.+ .+||.|+.+++++++..+.+.+++|+..+++|.|.++..+... ..+++++++++++..++.++....
T Consensus 610 ~kpGs~~~~~-~sc~tfd~sspki~v~~~~~hh~ka~i~~~k~~i~ve~~kt~~-~s~~~k~v~e~~~~k~evit~~a~- 686 (1165)
T KOG1948|consen 610 PKPGSYDVSL-GSCYTFDRSSPKITVPFDGVHHEKAVIARIKGTIDVENDKTAA-VSIREKFVVEIQDIKSEVITREAQ- 686 (1165)
T ss_pred cCCccceeec-cceeecccCCceeecCCCcchHhHhhhhhhccceeeeeccccc-ccchhhhhhhhhhhcccccCcccc-
Confidence 9999999997 9999999999999999999999999999999999987755432 356788999999888888844332
Q ss_pred ccCCCCCCCCceeEEEEEEecCCCeEEEEecCCCCCCcceEEEecceEEEEEeCCCcccccceEEeeeeeEEeeeecCCC
Q 002258 708 LTSPANDQTSYAVYGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSVSPPL 787 (946)
Q Consensus 708 ~~~~~~~~~~~~~y~~~~~a~~g~~~~~~p~~~~~~~~~~llF~P~~~~~~v~~~~c~~~~~~f~~~~G~~i~G~v~P~l 787 (946)
..+-|. +.+.|+|.+||++||+|+|+|+| |.|||||++++++|+++ |+..+.+|.|++||||+|+|.|||
T Consensus 687 --~~avD~-G~f~yey~twas~gekl~ivPss------k~lLFyP~s~eavvS~d-C~~~a~~f~g~rGLfL~Gsi~Pal 756 (1165)
T KOG1948|consen 687 --VPAVDN-GRFTYEYPTWASSGEKLVIVPSS------KLLLFYPTSKEAVVSGD-CIENAVKFNGFRGLFLDGSIKPAL 756 (1165)
T ss_pred --cccccC-CcceEechhhcCCCceEEEeecc------ceeeecCCceEEEEecc-cchhheeecceeeEEEcceeccCC
Confidence 222222 68999999999999999999998 89999999999999876 999999999999999999999999
Q ss_pred CCeEEEEEecccchhhhccccceeEEEEeCCCceEEeCCCCCCceEEEEeccCCeEEeecC--CCceeEeeeeeEEEEEE
Q 002258 788 SGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQVG--PNSFSCQKLSQISVRIY 865 (946)
Q Consensus 788 ~gv~I~i~~~~~~~~~~~~~~~~~~~~~T~~~G~f~~gpl~~~~~y~~~A~k~gy~~~~~~--~~~F~a~kL~~i~v~v~ 865 (946)
+||+|+|+.++++ ++.+++.|+.+|.|++|||+++++|+++|+||||+|++.+ +++|+++||++|+|.|+
T Consensus 757 ega~Ikis~kkds--------~~~Iev~T~~~Gafk~GPl~~dl~yd~tA~kegyvft~~~~t~~sfqa~kl~~vsv~vk 828 (1165)
T KOG1948|consen 757 EGAVIKISLKKDS--------DVVIEVITNKDGAFKIGPLKRDLDYDITATKEGYVFTPTSPTPGSFQAVKLSQVSVKVK 828 (1165)
T ss_pred CCcEEEEEecCCC--------ceeEEEEEcCCCcEEecccccccccceeeccCceEEecCCCCccceeeeeeeEEEEEEe
Confidence 9999999999987 7999999999999999999999999999999999999987 49999999999999999
Q ss_pred ecCCCCCcccceEEEEecCCccccccccCCCceEEecccCCCceeeEeeeeeEEEEeec
Q 002258 866 SKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKLGTAACIQ 924 (946)
Q Consensus 866 d~~~~~~pl~gvllsLsg~~~yR~n~~t~~~G~~~f~~L~PG~Y~lr~~~kEy~f~~~~ 924 (946)
|++ ++||+||||||||+++||+|++|++||.++|++|+|||||||||||||+|+|.-
T Consensus 829 dea--~q~LpgvLLSLsGg~~yRsNlvtgdng~~nf~sLsPgqyylRpmlKEykFePst 885 (1165)
T KOG1948|consen 829 DEA--TQPLPGVLLSLSGGKDYRSNLVTGDNGHKNFVSLSPGQYYLRPMLKEYKFEPST 885 (1165)
T ss_pred ccC--CCcCCcEEEEEecCcchhhccccCCCceeEEeecCcchhhhhhHHHhcCcCCCc
Confidence 997 699999999999999999999999999999999999999999999999999974
|
|
| >KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A | Back alignment and domain information |
|---|
| >PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A | Back alignment and domain information |
|---|
| >PF13715 DUF4480: Domain of unknown function (DUF4480) | Back alignment and domain information |
|---|
| >PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains | Back alignment and domain information |
|---|
| >PF13715 DUF4480: Domain of unknown function (DUF4480) | Back alignment and domain information |
|---|
| >PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains | Back alignment and domain information |
|---|
| >cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length | Back alignment and domain information |
|---|
| >cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 | Back alignment and domain information |
|---|
| >cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 | Back alignment and domain information |
|---|
| >cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length | Back alignment and domain information |
|---|
| >PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein | Back alignment and domain information |
|---|
| >PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein | Back alignment and domain information |
|---|
| >PRK15036 hydroxyisourate hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 | Back alignment and domain information |
|---|
| >cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >COG2373 Large extracellular alpha-helical protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 | Back alignment and domain information |
|---|
| >PRK15036 hydroxyisourate hydrolase; Provisional | Back alignment and domain information |
|---|
| >KOG2649 consensus Zinc carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A | Back alignment and domain information |
|---|
| >cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates | Back alignment and domain information |
|---|
| >cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A | Back alignment and domain information |
|---|
| >TIGR02962 hdxy_isourate hydroxyisourate hydrolase | Back alignment and domain information |
|---|
| >cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >TIGR00864 PCC polycystin cation channel protein | Back alignment and domain information |
|---|
| >cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates | Back alignment and domain information |
|---|
| >COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [] | Back alignment and domain information |
|---|
| >KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG2373 Large extracellular alpha-helical protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases | Back alignment and domain information |
|---|
| >PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases | Back alignment and domain information |
|---|
| >cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit | Back alignment and domain information |
|---|
| >PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators | Back alignment and domain information |
|---|
| >cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate | Back alignment and domain information |
|---|
| >TIGR02962 hdxy_isourate hydroxyisourate hydrolase | Back alignment and domain information |
|---|
| >cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | Back alignment and domain information |
|---|
| >TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase | Back alignment and domain information |
|---|
| >TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit | Back alignment and domain information |
|---|
| >cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit | Back alignment and domain information |
|---|
| >TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial | Back alignment and domain information |
|---|
| >cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols | Back alignment and domain information |
|---|
| >KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit | Back alignment and domain information |
|---|
| >TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial | Back alignment and domain information |
|---|
| >TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase | Back alignment and domain information |
|---|
| >PF10670 DUF4198: Domain of unknown function (DUF4198) | Back alignment and domain information |
|---|
| >PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators | Back alignment and domain information |
|---|
| >cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols | Back alignment and domain information |
|---|
| >COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups | Back alignment and domain information |
|---|
| >cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates | Back alignment and domain information |
|---|
| >cd05469 Transthyretin_like Transthyretin_like | Back alignment and domain information |
|---|
| >TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit | Back alignment and domain information |
|---|
| >COG2351 Transthyretin-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF10670 DUF4198: Domain of unknown function (DUF4198) | Back alignment and domain information |
|---|
| >cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates | Back alignment and domain information |
|---|
| >cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit | Back alignment and domain information |
|---|
| >TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial | Back alignment and domain information |
|---|
| >cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups | Back alignment and domain information |
|---|
| >TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit | Back alignment and domain information |
|---|
| >PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins | Back alignment and domain information |
|---|
| >TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial | Back alignment and domain information |
|---|
| >TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit | Back alignment and domain information |
|---|
| >smart00095 TR_THY Transthyretin | Back alignment and domain information |
|---|
| >PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain | Back alignment and domain information |
|---|
| >cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates | Back alignment and domain information |
|---|
| >PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [] | Back alignment and domain information |
|---|
| >KOG2649 consensus Zinc carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain | Back alignment and domain information |
|---|
| >cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins | Back alignment and domain information |
|---|
| >KOG3006 consensus Transthyretin and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates | Back alignment and domain information |
|---|
| >cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup | Back alignment and domain information |
|---|
| >cd05469 Transthyretin_like Transthyretin_like | Back alignment and domain information |
|---|
| >PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 [] | Back alignment and domain information |
|---|
| >smart00634 BID_1 Bacterial Ig-like domain (group 1) | Back alignment and domain information |
|---|
| >smart00095 TR_THY Transthyretin | Back alignment and domain information |
|---|
| >PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 [] | Back alignment and domain information |
|---|
| >PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins | Back alignment and domain information |
|---|
| >TIGR00864 PCC polycystin cation channel protein | Back alignment and domain information |
|---|
| >cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup | Back alignment and domain information |
|---|
| >PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators | Back alignment and domain information |
|---|
| >COG2351 Transthyretin-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF11589 DUF3244: Domain of unknown function (DUF3244); InterPro: IPR021638 This family of proteins with unknown function appear to be restricted to Bacteroidetes | Back alignment and domain information |
|---|
| >PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins | Back alignment and domain information |
|---|
| >cd00222 CollagenBindB Collagen-binding protein B domain, mediates bacterial adherence to collagen; the primary sequence has a non-repetitive, collagen-binding A region, followed by the repetitive B region; the B region has one to four 23 kDa repeat units (B1-B4) | Back alignment and domain information |
|---|
| >PF12866 DUF3823: Protein of unknown function (DUF3823); InterPro: IPR024278 This is a family of uncharacterised proteins from Bacteroidetes | Back alignment and domain information |
|---|
| >cd00222 CollagenBindB Collagen-binding protein B domain, mediates bacterial adherence to collagen; the primary sequence has a non-repetitive, collagen-binding A region, followed by the repetitive B region; the B region has one to four 23 kDa repeat units (B1-B4) | Back alignment and domain information |
|---|
| >PF10794 DUF2606: Protein of unknown function (DUF2606); InterPro: IPR019730 This entry represents bacterial proteins with unknown function | Back alignment and domain information |
|---|
| >PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators | Back alignment and domain information |
|---|
| >PF01190 Pollen_Ole_e_I: Pollen proteins Ole e I like; InterPro: IPR006041 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 5e-09
Identities = 84/635 (13%), Positives = 180/635 (28%), Gaps = 193/635 (30%)
Query: 169 SSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELG-FENGEVDDIFFAPGYEIRGLV 227
+ E Y +K+I+ A N + + ++ E+D I
Sbjct: 11 TGEHQYQYKDILS--VFEDAFVDNF--DCKDVQDMPKSILSKEEIDHI------------ 54
Query: 228 VAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV------ 281
+ + + G L+ + ++ V + KF+ +
Sbjct: 55 IMSKDAVSGTL-RLF-------WTLLSKQEEMVQK--FVEEVLRINYKFLMSPIKTEQRQ 104
Query: 282 PCGQYELVPHYKGENTVFDVSPSLVSMSV-RHQHVTV---------PEKFQVTGFSVGG- 330
P + + + +++ + +V R Q P K V V G
Sbjct: 105 PSMMTRMYIEQR--DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN-VLIDGVLGS 161
Query: 331 -------------RVVDENDMGVEGVKILVDGHERSITDR-----DGYYKL--------D 364
+V + D + + + + S Y++ D
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNL---KNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 365 QVTSNRYTIEAVKVHYK-FNKLKEY----MVLPNMASIADIKAISYDI-C---------G 409
++ + I +++ + K K Y +VL N+ + A +++ C
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA--FNLSCKILLTTRFKQ 276
Query: 410 VVRTVGSGNKVKVALTH--------------------GPDKVKPQVKQTDNNGNFCFEVP 449
V + + ++L H P + +V T+
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN---------- 326
Query: 450 P------GE--------------YRLSAMAATPESSSGILFLPP------YADVVVKSPL 483
P E + ESS + L P + + V P
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS--LNVLEPAEYRKMFDRLSVFPPS 384
Query: 484 LNIEFSQALVNVLGNVACKERCGPLVTVTLMR--LGQKHYDGTEKKTVSLTD-------- 533
+I + L + +V + +V L + L +K + T+S+
Sbjct: 385 AHIP-TILLSLIWFDV--IKSDVMVVVNKLHKYSLVEKQPK---ESTISIPSIYLELKVK 438
Query: 534 -DSDQFLFRDVLPGKYRLEVKRTSREAS-SMEDN-WCWEQSFIG--VDVGTNDVKGVEFV 588
+++ L R ++ Y + S + D + IG + + + F
Sbjct: 439 LENEYALHRSIV-DHYNIPKTFDSDDLIPPYLDQYFYS---HIGHHLKNIEHPERMTLF- 493
Query: 589 QKGY----WLNVISTHDVDAYMTQQDGSHVPLKVKKGSQHICVESPGVHNL-----HFVN 639
+ + +L HD A+ + ++K +IC P L F+
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
Query: 640 PC--VFFGSP---VLKMDTSNP-SPIYLKGEKYQL 668
S +L++ I+ + K Q+
Sbjct: 554 KIEENLICSKYTDLLRIALMAEDEAIFEEAHK-QV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X Length = 429 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 946 | |||
| 2pz4_A | 239 | Protein GBS052; SPAB, GRAM-positive pilins, adhesi | 99.18 | |
| 2pz4_A | 239 | Protein GBS052; SPAB, GRAM-positive pilins, adhesi | 99.15 | |
| 3kpt_A | 355 | Collagen adhesion protein; intramolecular amide bo | 98.92 | |
| 1cwv_A | 492 | Invasin; integrin-binding protein, INV gene, struc | 98.88 | |
| 3kpt_A | 355 | Collagen adhesion protein; intramolecular amide bo | 98.69 | |
| 2x9x_A | 444 | RRGB, cell WALL surface anchor family protein; cel | 98.65 | |
| 2x9x_A | 444 | RRGB, cell WALL surface anchor family protein; cel | 98.64 | |
| 1cwv_A | 492 | Invasin; integrin-binding protein, INV gene, struc | 98.61 | |
| 2y1v_A | 605 | RRGB, cell WALL surface anchor family protein; str | 98.41 | |
| 3tkv_A | 414 | FDEC fragment B, attaching and effacing protein, p | 98.4 | |
| 3irp_X | 429 | URO-adherence factor A; DEV-IGG fold, cell WALL, h | 98.37 | |
| 3tkv_A | 414 | FDEC fragment B, attaching and effacing protein, p | 98.37 | |
| 2y1v_A | 605 | RRGB, cell WALL surface anchor family protein; str | 98.34 | |
| 2xtl_A | 452 | Cell WALL surface anchor family protein; GRAM-posi | 98.25 | |
| 2xtl_A | 452 | Cell WALL surface anchor family protein; GRAM-posi | 98.15 | |
| 3irp_X | 429 | URO-adherence factor A; DEV-IGG fold, cell WALL, h | 98.14 | |
| 1d2p_A | 373 | Collagen adhesin, CNA; IGG, IGSF, mscramm, structu | 97.93 | |
| 1h8l_A | 380 | Carboxypeptidase GP180 residues 503-882; hydrolase | 97.78 | |
| 3mn8_A | 435 | LP15968P; catalytic domain of alpha/beta-hydrolase | 97.76 | |
| 2x5p_A | 121 | FBA2, fibronectin binding protein; protein binding | 97.73 | |
| 2pn5_A | 1325 | TEP1R, thioester-containing protein I; FULL-length | 97.69 | |
| 2nsm_A | 439 | Carboxypeptidase N catalytic chain; caroxypeptidas | 97.62 | |
| 2hr0_A | 645 | Complement C3 beta chain; complement component C3B | 97.41 | |
| 1uwy_A | 426 | Carboxypeptidase M; metallopeptidase, GPI-anchor, | 97.4 | |
| 2x5p_A | 121 | FBA2, fibronectin binding protein; protein binding | 97.23 | |
| 1h8l_A | 380 | Carboxypeptidase GP180 residues 503-882; hydrolase | 97.19 | |
| 1d2p_A | 373 | Collagen adhesin, CNA; IGG, IGSF, mscramm, structu | 97.18 | |
| 2nsm_A | 439 | Carboxypeptidase N catalytic chain; caroxypeptidas | 97.13 | |
| 3mn8_A | 435 | LP15968P; catalytic domain of alpha/beta-hydrolase | 97.07 | |
| 1uwy_A | 426 | Carboxypeptidase M; metallopeptidase, GPI-anchor, | 96.98 | |
| 3kcp_A | 321 | Cellulosomal-scaffolding protein A; dockerin, X-mo | 96.61 | |
| 2ww8_A | 893 | RRGA, cell WALL surface anchor family protein; IGG | 96.6 | |
| 3pf2_A | 319 | Cell WALL surface anchor family protein; pilus sha | 96.52 | |
| 2boy_A | 254 | 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi | 96.25 | |
| 2pn5_A | 1325 | TEP1R, thioester-containing protein I; FULL-length | 96.2 | |
| 2hr0_A | 645 | Complement C3 beta chain; complement component C3B | 96.2 | |
| 2ww8_A | 893 | RRGA, cell WALL surface anchor family protein; IGG | 96.14 | |
| 2xsu_A | 312 | Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE | 96.08 | |
| 2azq_A | 311 | Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int | 95.95 | |
| 1nkg_A | 508 | Rhamnogalacturonase B; polysaccharide lyase, carbo | 95.93 | |
| 2bum_B | 241 | Protocatechuate 3,4-dioxygenase beta chain; oxidor | 95.88 | |
| 3hr6_A | 436 | SPAA, putative surface-anchored fimbrial subunit; | 95.75 | |
| 2xsu_A | 312 | Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE | 95.71 | |
| 3th1_A | 260 | Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy | 95.66 | |
| 1dmh_A | 311 | 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc | 95.58 | |
| 3qdh_A | 290 | Fimbrial structural subunit; isopeptide bonds, act | 95.55 | |
| 1tmx_A | 293 | Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor | 95.55 | |
| 3qva_A | 116 | Transthyretin-like protein; transthyretin-related | 95.52 | |
| 1nkg_A | 508 | Rhamnogalacturonase B; polysaccharide lyase, carbo | 95.5 | |
| 3kcp_A | 321 | Cellulosomal-scaffolding protein A; dockerin, X-mo | 95.48 | |
| 2b39_A | 1661 | C3; thioester, immune defense, immune system; HET: | 95.47 | |
| 3t63_M | 238 | 3,4-PCD, protocatechuate 3,4-dioxygenase beta chai | 95.47 | |
| 2azq_A | 311 | Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int | 95.41 | |
| 2boy_A | 254 | 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi | 95.38 | |
| 3hhy_A | 280 | 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, | 95.29 | |
| 3n9t_A | 290 | PNPC; phospholipid binds, N-terminal helix tunnel, | 95.28 | |
| 3cu7_A | 1676 | Complement C5; Mg domain, inflammation, anaphylato | 95.25 | |
| 2bum_A | 209 | Protocatechuate 3,4-dioxygenase alpha chain; oxido | 95.22 | |
| 3t63_A | 200 | 3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha | 95.2 | |
| 2bum_B | 241 | Protocatechuate 3,4-dioxygenase beta chain; oxidor | 95.15 | |
| 3th1_A | 260 | Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy | 95.13 | |
| 3prx_B | 1642 | Cobra venom factor; immune system, complement, imm | 95.12 | |
| 1dmh_A | 311 | 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc | 95.01 | |
| 3hrz_A | 627 | Cobra venom factor; serine protease, glycosilated, | 95.01 | |
| 3t63_A | 200 | 3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha | 94.93 | |
| 4acq_A | 1451 | Alpha-2-macroglobulin; hydrolase inhibitor, protei | 94.93 | |
| 3t63_M | 238 | 3,4-PCD, protocatechuate 3,4-dioxygenase beta chai | 94.88 | |
| 3e8v_A | 82 | Possible transglutaminase-family protein; structur | 94.84 | |
| 2g2n_A | 114 | Transthyretin-like protein; transthyretin-related | 94.83 | |
| 3pf2_A | 319 | Cell WALL surface anchor family protein; pilus sha | 94.8 | |
| 3o5u_A | 257 | Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor | 94.75 | |
| 3hhy_A | 280 | 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, | 94.72 | |
| 1tmx_A | 293 | Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor | 94.7 | |
| 3n9t_A | 290 | PNPC; phospholipid binds, N-terminal helix tunnel, | 94.57 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 94.57 | |
| 3uxf_A | 488 | Fimbrial subunit type 1; adhesin, isopeptide, GRAM | 94.49 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.48 | |
| 1f86_A | 115 | Transthyretin Thr119Met variant; protein stability | 94.45 | |
| 3o5u_A | 257 | Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor | 94.27 | |
| 3qec_A | 150 | Putative carbohydrate binding protein; suramin bin | 94.26 | |
| 2bum_A | 209 | Protocatechuate 3,4-dioxygenase alpha chain; oxido | 94.24 | |
| 3qec_A | 150 | Putative carbohydrate binding protein; suramin bin | 94.16 | |
| 2h0e_A | 121 | Transthyretin-like protein PUCM; beta sandwitch, h | 94.06 | |
| 1xpn_A | 170 | Hypothetical protein PA1324; B-barrel, structural | 93.9 | |
| 1oo2_A | 119 | Transthyretin; retinol-binding protein, tetramer, | 93.88 | |
| 2h4e_A | 127 | Transthyretin; amyloid, sulfite, familial amyloido | 93.87 | |
| 4fxk_A | 656 | Complement C4 beta chain; immune system, proteolyt | 93.81 | |
| 3qdh_A | 290 | Fimbrial structural subunit; isopeptide bonds, act | 93.72 | |
| 1wlh_A | 311 | Gelation factor; ABP-120, filamin, immunoglobulin | 93.62 | |
| 1xpn_A | 170 | Hypothetical protein PA1324; B-barrel, structural | 93.59 | |
| 3iwv_A | 138 | 5-hydroxyisourate hydrolase; transthyretin, molecu | 93.51 | |
| 2xi9_A | 457 | Ancillary protein 1; cell adhesion, GRAM positive | 93.17 | |
| 4ank_A | 147 | Transthyretin; hormone binding protein, thyroxine | 93.0 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 93.0 | |
| 3e8v_A | 82 | Possible transglutaminase-family protein; structur | 92.68 | |
| 1qfh_A | 212 | Protein (gelation factor); actin binding protein, | 92.67 | |
| 3hrz_A | 627 | Cobra venom factor; serine protease, glycosilated, | 92.59 | |
| 3hr6_A | 436 | SPAA, putative surface-anchored fimbrial subunit; | 92.39 | |
| 2g2n_A | 114 | Transthyretin-like protein; transthyretin-related | 92.21 | |
| 3qva_A | 116 | Transthyretin-like protein; transthyretin-related | 92.16 | |
| 1f86_A | 115 | Transthyretin Thr119Met variant; protein stability | 91.65 | |
| 2x9z_A | 262 | RRGB, cell WALL surface anchor family protein; cel | 91.25 | |
| 1ti6_B | 274 | Pyrogallol hydroxytransferase small subunit; molyb | 91.03 | |
| 2h4e_A | 127 | Transthyretin; amyloid, sulfite, familial amyloido | 90.97 | |
| 1oo2_A | 119 | Transthyretin; retinol-binding protein, tetramer, | 90.74 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 90.58 | |
| 3uxf_A | 488 | Fimbrial subunit type 1; adhesin, isopeptide, GRAM | 90.44 | |
| 2k7p_A | 188 | Filamin-A; IG-like, ABP-280, actin binding protein | 90.35 | |
| 2b39_A | 1661 | C3; thioester, immune defense, immune system; HET: | 90.2 | |
| 2x9z_A | 262 | RRGB, cell WALL surface anchor family protein; cel | 90.06 | |
| 3cu7_A | 1676 | Complement C5; Mg domain, inflammation, anaphylato | 89.93 | |
| 3iwv_A | 138 | 5-hydroxyisourate hydrolase; transthyretin, molecu | 89.58 | |
| 1wlh_A | 311 | Gelation factor; ABP-120, filamin, immunoglobulin | 89.42 | |
| 4ank_A | 147 | Transthyretin; hormone binding protein, thyroxine | 89.4 | |
| 3prx_B | 1642 | Cobra venom factor; immune system, complement, imm | 89.39 | |
| 2h0e_A | 121 | Transthyretin-like protein PUCM; beta sandwitch, h | 89.04 | |
| 1ti6_B | 274 | Pyrogallol hydroxytransferase small subunit; molyb | 88.94 | |
| 2xi9_A | 457 | Ancillary protein 1; cell adhesion, GRAM positive | 88.89 | |
| 1d2o_A | 187 | Collagen adhesin, CNA; beta sandwich, IGG, IGSF, s | 88.44 | |
| 4fxt_A | 202 | Uncharacterized protein; PF12866 family, DUF3823, | 88.4 | |
| 2j3s_A | 288 | Filamin-A; cytoskeleton, phosphorylation, structur | 87.32 | |
| 2k7p_A | 188 | Filamin-A; IG-like, ABP-280, actin binding protein | 86.41 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 86.37 | |
| 4acq_A | 1451 | Alpha-2-macroglobulin; hydrolase inhibitor, protei | 85.92 | |
| 1f00_I | 282 | Intimin; immunoglobulin-like fold, C-type lectin-l | 85.71 | |
| 4fxk_A | 656 | Complement C4 beta chain; immune system, proteolyt | 85.17 | |
| 1f00_I | 282 | Intimin; immunoglobulin-like fold, C-type lectin-l | 84.85 | |
| 3hn5_A | 215 | Putative exported protein BF0290; YP_210027.1, str | 84.42 | |
| 2k7q_A | 191 | Filamin-A; IG-like, ABP-280, actin binding protein | 84.32 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 83.78 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 82.88 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 82.87 | |
| 2k7q_A | 191 | Filamin-A; IG-like, ABP-280, actin binding protein | 82.5 | |
| 1qfh_A | 212 | Protein (gelation factor); actin binding protein, | 81.03 |
| >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A | Back alignment and structure |
|---|
| >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 | Back alignment and structure |
|---|
| >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A | Back alignment and structure |
|---|
| >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A | Back alignment and structure |
|---|
| >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A | Back alignment and structure |
|---|
| >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 | Back alignment and structure |
|---|
| >2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X | Back alignment and structure |
|---|
| >2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A | Back alignment and structure |
|---|
| >2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X | Back alignment and structure |
|---|
| >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* | Back alignment and structure |
|---|
| >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A* | Back alignment and structure |
|---|
| >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 | Back alignment and structure |
|---|
| >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* | Back alignment and structure |
|---|
| >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 | Back alignment and structure |
|---|
| >3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B | Back alignment and structure |
|---|
| >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A | Back alignment and structure |
|---|
| >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} | Back alignment and structure |
|---|
| >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A* | Back alignment and structure |
|---|
| >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A* | Back alignment and structure |
|---|
| >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida} | Back alignment and structure |
|---|
| >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A | Back alignment and structure |
|---|
| >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* | Back alignment and structure |
|---|
| >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* | Back alignment and structure |
|---|
| >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A* | Back alignment and structure |
|---|
| >3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida} | Back alignment and structure |
|---|
| >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* | Back alignment and structure |
|---|
| >3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii} | Back alignment and structure |
|---|
| >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} | Back alignment and structure |
|---|
| >3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A | Back alignment and structure |
|---|
| >3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B | Back alignment and structure |
|---|
| >2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus} | Back alignment and structure |
|---|
| >3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ... | Back alignment and structure |
|---|
| >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} | Back alignment and structure |
|---|
| >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* | Back alignment and structure |
|---|
| >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A | Back alignment and structure |
|---|
| >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* | Back alignment and structure |
|---|
| >3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ... | Back alignment and structure |
|---|
| >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* | Back alignment and structure |
|---|
| >3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B* | Back alignment and structure |
|---|
| >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* | Back alignment and structure |
|---|
| >3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A* | Back alignment and structure |
|---|
| >3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ... | Back alignment and structure |
|---|
| >4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ... | Back alignment and structure |
|---|
| >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A | Back alignment and structure |
|---|
| >3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A | Back alignment and structure |
|---|
| >3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A* | Back alignment and structure |
|---|
| >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* | Back alignment and structure |
|---|
| >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} | Back alignment and structure |
|---|
| >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
| >3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris} | Back alignment and structure |
|---|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
| >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... | Back alignment and structure |
|---|
| >3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A* | Back alignment and structure |
|---|
| >3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* | Back alignment and structure |
|---|
| >3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* | Back alignment and structure |
|---|
| >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1 | Back alignment and structure |
|---|
| >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* | Back alignment and structure |
|---|
| >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A | Back alignment and structure |
|---|
| >4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A* | Back alignment and structure |
|---|
| >3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii} | Back alignment and structure |
|---|
| >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A | Back alignment and structure |
|---|
| >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1 | Back alignment and structure |
|---|
| >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A | Back alignment and structure |
|---|
| >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A | Back alignment and structure |
|---|
| >4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
| >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 | Back alignment and structure |
|---|
| >3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A* | Back alignment and structure |
|---|
| >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* | Back alignment and structure |
|---|
| >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A | Back alignment and structure |
|---|
| >3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... | Back alignment and structure |
|---|
| >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N* | Back alignment and structure |
|---|
| >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A | Back alignment and structure |
|---|
| >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* | Back alignment and structure |
|---|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris} | Back alignment and structure |
|---|
| >2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus} | Back alignment and structure |
|---|
| >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A | Back alignment and structure |
|---|
| >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A | Back alignment and structure |
|---|
| >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A | Back alignment and structure |
|---|
| >4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B* | Back alignment and structure |
|---|
| >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* | Back alignment and structure |
|---|
| >1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N* | Back alignment and structure |
|---|
| >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A | Back alignment and structure |
|---|
| >1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A | Back alignment and structure |
|---|
| >2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
| >4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I | Back alignment and structure |
|---|
| >4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A* | Back alignment and structure |
|---|
| >1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I | Back alignment and structure |
|---|
| >3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
| >2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 946 | |||
| d1vlfn1 | 79 | Transhydroxylase beta subunit, BthL, C-terminal do | 98.78 | |
| d1h8la1 | 79 | Carboxypeptidase D C-terminal domain {Crested duck | 98.71 | |
| d1nkga1 | 87 | Rhamnogalacturonase B, RhgB, middle domain {Asperg | 98.6 | |
| d1vlfn1 | 79 | Transhydroxylase beta subunit, BthL, C-terminal do | 98.56 | |
| d1h8la1 | 79 | Carboxypeptidase D C-terminal domain {Crested duck | 98.39 | |
| d1nkga1 | 87 | Rhamnogalacturonase B, RhgB, middle domain {Asperg | 98.37 | |
| d1uwya1 | 107 | Carboxypeptidase M C-terminal domain {Human (Homo | 98.22 | |
| d1uwya1 | 107 | Carboxypeptidase M C-terminal domain {Human (Homo | 97.95 | |
| d2burb1 | 238 | Protocatechuate-3,4-dioxygenase, beta chain {Acine | 96.24 | |
| d3pccm_ | 236 | Protocatechuate-3,4-dioxygenase, beta chain {Pseud | 96.07 | |
| d1s9aa_ | 256 | Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus | 95.81 | |
| d1dmha_ | 309 | Catechol 1,2-dioxygenase {Acinetobacter calcoaceti | 95.62 | |
| d2burb1 | 238 | Protocatechuate-3,4-dioxygenase, beta chain {Acine | 95.61 | |
| d3pccm_ | 236 | Protocatechuate-3,4-dioxygenase, beta chain {Pseud | 95.6 | |
| d3pcca_ | 200 | Protocatechuate-3,4-dioxygenase, alpha chain {Pseu | 95.37 | |
| d1dmha_ | 309 | Catechol 1,2-dioxygenase {Acinetobacter calcoaceti | 95.35 | |
| d1s9aa_ | 256 | Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus | 95.24 | |
| d2b59b2 | 96 | Cellulosomal scaffolding protein A {Clostridium th | 95.01 | |
| d3pcca_ | 200 | Protocatechuate-3,4-dioxygenase, alpha chain {Pseu | 95.0 | |
| d1cwva1 | 94 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 94.38 | |
| d2bura1 | 202 | Protocatechuate-3,4-dioxygenase, alpha chain {Acin | 93.83 | |
| d1f86a_ | 115 | Transthyretin (synonym: prealbumin) {Human (Homo s | 93.41 | |
| d2bura1 | 202 | Protocatechuate-3,4-dioxygenase, alpha chain {Acin | 92.72 | |
| d1oo2a_ | 116 | Transthyretin (synonym: prealbumin) {Gilthead seab | 92.38 | |
| d1xpna_ | 170 | Hypothetical protein PA1324 {Pseudomonas aeruginos | 91.36 | |
| d1xpna_ | 170 | Hypothetical protein PA1324 {Pseudomonas aeruginos | 91.18 | |
| d1f00i1 | 95 | Intimin {Escherichia coli [TaxId: 562]} | 91.07 | |
| d2b59b2 | 96 | Cellulosomal scaffolding protein A {Clostridium th | 90.72 | |
| d1cwva2 | 96 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 90.44 | |
| d1cwva1 | 94 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 90.07 | |
| d1f86a_ | 115 | Transthyretin (synonym: prealbumin) {Human (Homo s | 89.45 | |
| d1oo2a_ | 116 | Transthyretin (synonym: prealbumin) {Gilthead seab | 89.08 | |
| d1cwva3 | 103 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 88.43 | |
| d1f00i1 | 95 | Intimin {Escherichia coli [TaxId: 562]} | 83.52 | |
| d1cwva2 | 96 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 83.35 |
| >d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Prealbumin-like superfamily: Cna protein B-type domain family: Cna protein B-type domain domain: Transhydroxylase beta subunit, BthL, C-terminal domain species: Pelobacter acidigallici [TaxId: 35816]
Probab=98.78 E-value=1.2e-08 Score=86.99 Aligned_cols=61 Identities=23% Similarity=0.294 Sum_probs=52.3
Q ss_pred CcEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEE
Q 002258 125 GFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVE 196 (946)
Q Consensus 125 g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~ 196 (946)
.|.++|.|++ |+|++||+|.|.+. ++.+..++||++|.|+|.+|+||+|.|.+++.||...
T Consensus 2 n~~~~gi~~~----------G~~v~gA~V~L~~~-~~~v~~t~Td~~G~F~f~~l~~G~Y~l~is~~Gy~~~ 62 (79)
T d1vlfn1 2 NYVTAGILVQ----------GDCFEGAKVVLKSG-GKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYS 62 (79)
T ss_dssp EEEEEEEEET----------TEECTTCEEEEEET-TEEEEEEECCTTSEEEEEEECSEEEEEEEEETTEEEE
T ss_pred CcEEeeEEEC----------CccccccEEEEECC-CCeEEeeEECCCCcEEEEecCCCCEEEEEEEecccce
Confidence 3567776653 58999999999874 5667889999999999999999999999999999754
|
| >d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} | Back information, alignment and structure |
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| >d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
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| >d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]} | Back information, alignment and structure |
|---|
| >d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} | Back information, alignment and structure |
|---|
| >d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]} | Back information, alignment and structure |
|---|
| >d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]} | Back information, alignment and structure |
|---|
| >d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]} | Back information, alignment and structure |
|---|
| >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]} | Back information, alignment and structure |
|---|
| >d1cwva3 b.1.14.1 (A:693-795) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|