Citrus Sinensis ID: 002285
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 942 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.968 | 0.968 | 0.748 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.766 | 0.878 | 0.673 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.828 | 0.981 | 0.596 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.806 | 0.970 | 0.584 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.704 | 0.905 | 0.436 | 1e-167 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | no | 0.510 | 0.937 | 0.495 | 1e-136 | |
| Q00217 | 480 | Alpha,alpha-trehalose-pho | yes | no | 0.495 | 0.972 | 0.492 | 1e-134 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.484 | 0.972 | 0.496 | 1e-133 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.5 | 0.951 | 0.484 | 1e-133 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | no | no | 0.485 | 0.883 | 0.493 | 1e-132 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1414 bits (3661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/946 (74%), Positives = 777/946 (82%), Gaps = 34/946 (3%)
Query: 25 MPGNKYN-SSPLTPRTRLERLLRERELRKNRSFLQNEGEPDFFASES------FLNASES 77
MPGNKYN SS P +R ERLLR+RELR+ R + D S L S
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVAGSSENSENDLRLEGDSS 60
Query: 78 WGPIDE--EEFAGTRSSTDNGERLEGR--CKQRLLVVANRLPVSAVRRGEDSWQLEISVG 133
+++ E A + D ER E R +QRLLVVANRLPVSAVRRGEDSW LEIS G
Sbjct: 61 RQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLEISAG 120
Query: 134 GLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEETVHQYYNGYC 193
GLVSALLGV+EFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDEE VHQYYNGYC
Sbjct: 121 GLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYC 180
Query: 194 NNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHL 253
NN+LWPLFHYLGLPQEDRLATTRSFQSQF AYK+ANQMFA VVN YEEGDVVWCHDYHL
Sbjct: 181 NNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHL 240
Query: 254 MFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHF 313
MFLP+CLKEYN+ MKVGWFLHTPFPSSEIHRTLPSR+ELLRSVLAADLVGFHTYDYARHF
Sbjct: 241 MFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHF 300
Query: 314 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG 373
VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRF+RALE+P+V H+ ELKERFAG
Sbjct: 301 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAG 360
Query: 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQV 433
RKVMLGVDRLDMIKGIPQKILAFEKFLEEN +WRDKVVL+QIAVPTRTDVPEYQKLTSQV
Sbjct: 361 RKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQV 420
Query: 434 HEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493
HEIVGRINGR+GTLT VPIHHLDRSLDFHALCALYA+TDVALVTSLRDGMNLVSYEFVAC
Sbjct: 421 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVAC 480
Query: 494 QASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553
Q +KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA+SIG ALNM A+EREKRH HNF H
Sbjct: 481 QEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHH 540
Query: 554 VTTHTSQEWAATFVSELNDTIVEAQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATL 613
V THT+QEWA TFVSELNDT++EAQ+R +VPP LP A+ Y +SNNRLLILGFNATL
Sbjct: 541 VKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGFNATL 600
Query: 614 TAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673
T PVD GRRG QI+EM+ LHP+LK PLK LC DP TT+VVLSGS R+VLD NFGEY+M
Sbjct: 601 TEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYDM 660
Query: 674 WLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNY 733
WLAAENGMFLRLT GEWMTTMPE+LNM+WVDSVKHVF+YFTERTPRSHFE R+TSL+WNY
Sbjct: 661 WLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNY 720
Query: 734 KYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVR 793
KYAD+EFGRLQARD+LQHLW+GPISNASVDVVQG RSVEVRAVGVTKGAAIDRILGEIV
Sbjct: 721 KYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVH 780
Query: 794 HKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRA------------------ 835
K + TPIDYVLCIGHFL KDED+YTFFEPELP + PA R+
Sbjct: 781 SKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDRRPP 840
Query: 836 NAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEG 895
+ + H S S+ + + QRSL S + SN+ G RP+ ++++ N
Sbjct: 841 SKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSP-EKISWN-- 897
Query: 896 SSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAECPQS 941
VLDL+GENYFSC V R R+NARY LGS DVV L +LA+ S
Sbjct: 898 --VLDLKGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/731 (67%), Positives = 611/731 (83%), Gaps = 9/731 (1%)
Query: 104 KQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIG 162
+ RLLVVANRLPVSA R GE+SW LE+S GGLVS LLG+ +F+ +W+GW GV+V DEI
Sbjct: 11 RPRLLVVANRLPVSAKRTGENSWSLEMSPGGLVSGLLGITSQFDTKWVGWPGVDVHDEIE 70
Query: 163 QKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQF 222
+ ALT++LAE +CIPVFL+ QYYNGYCN +LWP+ H++GLPQED+ T ++F++Q+
Sbjct: 71 KNALTESLAEMKCIPVFLNG-VFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 223 DAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEI 282
DAYK+AN+MF V+ + YEEGD+VWCHDYHLMFLPQ LKEYNN +KVGWFLH+PFPSSE+
Sbjct: 130 DAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEV 189
Query: 283 HRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAF 342
++TLPSR+ELLR++LAADL+GFHTYD+ARHF+S CTRILG+EGT EGV QGR+TRVA F
Sbjct: 190 YKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHEGVVYQGRVTRVAVF 249
Query: 343 PIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEE 402
PIGID DRF+R +LP+V +NEL+E+FAG+KV+LGVDRLDMIKGIPQK LAFEKFLEE
Sbjct: 250 PIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEE 309
Query: 403 NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFH 462
NP WRDKVVL+QIAVPTR DVPEY+KL SQVH +VGRINGR+G+++++PIHHLD S+DF+
Sbjct: 310 NPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFN 369
Query: 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNP 522
LCA+YAI DV LVTSLRDGMNLVSYEFVACQ +KKGVL+LSEFAGA QSLG GA++VNP
Sbjct: 370 YLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNP 429
Query: 523 WNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQIRTR 582
W++TEV+S+I ALNMPA+ERE RH NF +V TH++++W F+SELN I E++++ R
Sbjct: 430 WDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESEMQMR 489
Query: 583 QVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPL 642
++P LP + + Y QSNNRL+ILGF TL P++ +EM+ KL+P+LK L
Sbjct: 490 KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMN------SGTKEMDLKLNPELKGTL 543
Query: 643 KRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDW 702
K LC+DP TTVVVLS S +N+L+ NFGE N+WLAAENGMF + TTGEW+T MP+N+N+DW
Sbjct: 544 KALCNDPKTTVVVLSRSGKNILNKNFGESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDW 603
Query: 703 VDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASV 762
VD VK+VF+YFT+RTPRS+FE ETSLVWNY+YAD+EFGR QARD+LQ+LW+GPISNASV
Sbjct: 604 VDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASV 663
Query: 763 DVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822
DVV+G SVEV A+G TKGAAI RILGEIV K + TPID+V C G+FL+KDEDIYTFFE
Sbjct: 664 DVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFE 723
Query: 823 PE-LPFESPAG 832
+ L +SP G
Sbjct: 724 SKILSSKSPNG 734
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/847 (59%), Positives = 616/847 (72%), Gaps = 67/847 (7%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKA 165
RLLVV+ LPV+A R GE+SW +S GGLVSALLG++EFE +WIGW GV+V D IG+K
Sbjct: 5 RLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAIGKKT 64
Query: 166 LTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAY 225
L+ LAEK CIPVFL EE QYYNGYCNN+LWP+FHYLG P E R T ++QSQ++AY
Sbjct: 65 LSITLAEKGCIPVFL-EEVCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQYEAY 123
Query: 226 KRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRT 285
K+ANQ+F VV YEEGDVVWCHDYH+M LPQ LKEYN+ MKVGWFLHTPFPSSE+++T
Sbjct: 124 KKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEMYKT 183
Query: 286 LPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIG 345
LPSR++LLRSVL ADLVGFHTYD+ARHF++AC ILG+E T EG+ DQG++TRVA FPIG
Sbjct: 184 LPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAVFPIG 243
Query: 346 IDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPS 405
I+ +RF+ EL +V ++ + K F GRK++LGVDRLD IKGIPQK AFEKFLEEN
Sbjct: 244 IEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEENAE 303
Query: 406 WRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALC 465
WR KV+L+QIAVPTR + EYQK+ Q H VGRINGR+G++++VPI HLD S+DF+ LC
Sbjct: 304 WRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFNQLC 363
Query: 466 ALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNI 525
ALYAITDV LVTSLRDGMNLVS EF+ACQ ++KGVLILSEFAGA QSLGAGAILVNPWNI
Sbjct: 364 ALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVNPWNI 423
Query: 526 TEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFV---------SELNDTIVE 576
EV+S+IG ALNM +E+E++H NF +V TH++Q+WA F+ S+L +
Sbjct: 424 KEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEITTS 483
Query: 577 AQIRTRQVPP-SLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLH 635
A++ LP + Y +SNNRLLILGF TLT P+ RRG M +LH
Sbjct: 484 AELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MNLELH 540
Query: 636 PDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMP 695
P LKE LK LC DP TTVVVLS S++ +LD NFGEYNMWLAAENGMFLR T+GEW+T +P
Sbjct: 541 PQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWVTRIP 600
Query: 696 ENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSG 755
E++N++W+D VKHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARD+LQHLW+G
Sbjct: 601 EHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHLWAG 660
Query: 756 PISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDE 815
PISNASVDVV+GG+SVEV AVGVTKG+A++RILGEIV +K + TPIDYVLCIG FL KDE
Sbjct: 661 PISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLGKDE 720
Query: 816 DIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSN 875
D+YTFFEPEL +AKS + +SS
Sbjct: 721 DVYTFFEPELT-----------------------KKAKSLSSSGSDSPKKVSS------- 750
Query: 876 YLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNEL 935
+++DL+GENYFS + + + ARYFL SS DVV L+ +L
Sbjct: 751 ---------------------TIVDLKGENYFSVAIGQTHTKARYFLDSSDDVVKLIGKL 789
Query: 936 AECPQSN 942
C +N
Sbjct: 790 --CTHNN 794
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/833 (58%), Positives = 617/833 (74%), Gaps = 73/833 (8%)
Query: 104 KQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQ 163
+Q LLVVANRLP SA R GE SW LE+S GG + L + +
Sbjct: 10 RQTLLVVANRLPASAKRTGEHSWSLEMSPGGKFNLL---------------------VEK 48
Query: 164 KALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFD 223
A++K+LAE +CIPVFL+E QYYNGY N +LWP+ H++GLPQE T ++F++Q+D
Sbjct: 49 DAVSKSLAEMKCIPVFLNE-VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFETQYD 107
Query: 224 AYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH 283
AYK+AN+MF V+ Y++GD+VWC DYHLMFLPQ LKEYNN +KVGWFLH+PFPSSEI+
Sbjct: 108 AYKKANRMFLDVIKENYKDGDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEIY 167
Query: 284 RTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFP 343
+TLPSR+ELLRSVLAADL+ FHTYD+ARHFV+ CTRILG+EGT EGV QGR+TRV P
Sbjct: 168 KTLPSRSELLRSVLAADLISFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVVVLP 227
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
+GI +RF++ +LP+V +NELK+RF+G+KV+LGVDRLDMIKGIPQK L FEKFL+EN
Sbjct: 228 MGIYPNRFIKTCKLPEVIQQMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFLDEN 287
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P+WRDK+VL+QIAVPTR +VPEYQKL +QVH +VGRINGR+G+++++PIHH+D S+D +
Sbjct: 288 PNWRDKIVLVQIAVPTRNEVPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVDSNY 347
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW 523
LCALYAI+DV LVTSLRDG+NLVS+EFVACQ +K+GVLILSEFAGA QSLGAGA+LVNPW
Sbjct: 348 LCALYAISDVMLVTSLRDGLNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLVNPW 407
Query: 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQIRTRQ 583
N+TEV+S+I ALNMP +ERE RH NF +V TH++++W F+SELND E++++ R+
Sbjct: 408 NVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQIRK 467
Query: 584 VPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLK 643
+P LP + + Y SNNRL+ILGF T+T P R +EM+ KL+P+LKE LK
Sbjct: 468 IPHELPQQDVIQRYSLSNNRLIILGFYGTITEP------RNSLSKEMDLKLNPELKETLK 521
Query: 644 RLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWV 703
LC+DP TTVVVLS S +N+LD NFGEY +WLAAENGMFL+ TT EW+T MP+N+N+DWV
Sbjct: 522 ALCNDPKTTVVVLSRSGKNILDKNFGEYKIWLAAENGMFLKHTTEEWVTNMPQNMNLDWV 581
Query: 704 DSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVD 763
D +K+VF+YFT+RTPRS FE +TSLVWNY+YAD+EFGR QARD+LQ+LW+GPISNAS +
Sbjct: 582 DGLKNVFKYFTDRTPRSFFEASKTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASAE 641
Query: 764 VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823
VV+G SVEV A+GVTK I ILGEIV K + TPIDYV C G+FL+KDEDIYTFFE
Sbjct: 642 VVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKAMTTPIDYVFCSGYFLEKDEDIYTFFE- 700
Query: 824 ELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWR 883
S+I K + R + S S+E+KVS
Sbjct: 701 -----------------------SEILSPKLSHETRSKSSSSNHSLEKKVS--------- 728
Query: 884 PAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELA 936
LN VLDL+ ENYFS + + R+ ARY + SS +VV LL++LA
Sbjct: 729 --------LN----VLDLKQENYFSTAIGQARTKARYVVDSSHNVVNLLHKLA 769
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 590 bits (1522), Expect = e-167, Method: Compositional matrix adjust.
Identities = 311/712 (43%), Positives = 444/712 (62%), Gaps = 48/712 (6%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKA 165
RL+VV+NRLPVS + W ++S GGLV+AL G++ W+GW G + ++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWVGWIGAEIEEDDRKEI 75
Query: 166 LTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYL--GLPQEDRLATTRSFQSQFD 223
+ CIPVFL E+ +++YNG+ N +LWPLFHYL L +DR+ ++
Sbjct: 76 KELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRI---------WN 126
Query: 224 AYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH 283
+Y AN+ F+ VV I + D+VW HDYH+M LP+ LK+ + ++G+FLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 284 RTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFP 343
R LP R E+L +L L+GFHTYDYARHF+ +CTRI+GLE P GV + R +V FP
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKDRFVQVGVFP 246
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
+GID D+F +L+ QVQ+ I ELKE F G KV++G+DRLD IKGIPQK+ A E+ ++
Sbjct: 247 VGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKY 306
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P W+ K+VLIQ+AVP+R DV EYQKL +V E+VGRING YG++ PIH+L +S+D
Sbjct: 307 PEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSE 366
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW 523
L ALY I+D AL+TS+RDGMNLV+ E++ CQ GVLILSEF GAAQSL +GA+++NPW
Sbjct: 367 LTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSL-SGAVMINPW 425
Query: 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN------DTIVEA 577
N EVA SI +L MP +ERE++H +VT HT+ W FV ELN D +V
Sbjct: 426 NTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDKMVTI 485
Query: 578 QIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPD 637
Q L I+ VD Y QS RLLI ++ TL P + + + +E
Sbjct: 486 Q--------KLDIEKVVDIYKQSKRRLLIFAYDGTLI-PYNNVPQLSRPSQE-------- 528
Query: 638 LKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRL-TTGEWMTTMPE 696
L L +DP T V +LSG D+ L + F + L+AE G F +L + EW +P
Sbjct: 529 LLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPESTEWEQQVP- 587
Query: 697 NLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGP 756
++++ W ++++ +F+YFT RTP S FE +E W+Y+ AD FG +QAR++ HL
Sbjct: 588 SMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHL---- 643
Query: 757 ISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIG 808
N +DV+ G +++ VR+ + +++ +++ + + KGL D +L IG
Sbjct: 644 -DNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIP-KGL----DLILLIG 689
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/494 (49%), Positives = 328/494 (66%), Gaps = 13/494 (2%)
Query: 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEA-RWIGWAGVNVPDEIGQ 163
+RL+VV+NRLP++ R+ ++ +S GGLVSAL G+++ +W+GW G +P++
Sbjct: 19 RRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMTFQWLGWCGQEIPEDEKP 78
Query: 164 KALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFD 223
+ + E IPVFLD+ET ++YNG+ N++LWPLFHY P E + ++
Sbjct: 79 MIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH--PGEINFD-----EENWE 131
Query: 224 AYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY----NNNMKVGWFLHTPFPS 279
AY+ AN FA+ + ++GD++W DYHLM LPQ L+E ++K+G+FLHTPFPS
Sbjct: 132 AYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGDKFKDIKIGFFLHTPFPS 191
Query: 280 SEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRV 339
SEI+R LP R E+L VL DLVGFHTYDYARHF+SAC+RIL L P GVE G++ V
Sbjct: 192 SEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILNLSTLPNGVEYNGQMVSV 251
Query: 340 AAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399
FPIGID ++F AL+ V+D I ++ R G KV++GVDRLD IKG+PQK AFE F
Sbjct: 252 GTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDRLDYIKGVPQKFHAFEVF 311
Query: 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL 459
LE+ P W KVVL+Q+AVP+R DV EYQ L + V+E+VGRINGR+GT+ PIH L +S+
Sbjct: 312 LEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGRFGTVEYTPIHFLHKSV 371
Query: 460 DFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAIL 519
F L ALY ++DV L+TS RDGMNLVSYE++ Q + G LILSEFAGAAQSL G+I+
Sbjct: 372 RFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALILSEFAGAAQSLN-GSIV 430
Query: 520 VNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQI 579
+NPWN E+A+SI AL MP +RE F +V +TSQ W +FV EL +
Sbjct: 431 INPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFWGQSFVGELQRIQHYSHP 490
Query: 580 RTRQVPPSLPIKGA 593
R+ P L K A
Sbjct: 491 HPRRTNPILRTKSA 504
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00217|TPSB_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Aspergillus niger GN=tpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/483 (49%), Positives = 330/483 (68%), Gaps = 16/483 (3%)
Query: 95 NGERLEGRCKQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEA-RWIGWA 153
NG EG RLL+V+NRLP++ R G ++ +S GGLV+ L G+ + +W GW
Sbjct: 4 NGSSSEG--DHRLLIVSNRLPITIRRSGGGKYEFSMSSGGLVTGLSGLSKTTTFQWYGWP 61
Query: 154 GVNVPDEIGQKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLA 213
G+ VP++ + E PVF+D++ ++YNG+ N++LWPL HY P E
Sbjct: 62 GLEVPEDEIDSVKQRLQEEFNATPVFMDDKLADRHYNGFSNSILWPLLHYH--PGEIVFD 119
Query: 214 TTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY-----NNNMK 268
++ +DAY+ AN++FAK + + EGD+VW HDYHLM LP+ L+E NN++
Sbjct: 120 -----EAAWDAYREANRLFAKTIAHEAREGDLVWVHDYHLMLLPEVLREELAALGKNNIR 174
Query: 269 VGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 328
+G+FLHTPFPSSEI+R LP R++LLR VL DL+GFHTYDYARHF+S C+ ILGL TP
Sbjct: 175 IGFFLHTPFPSSEIYRILPVRSQLLRGVLQCDLIGFHTYDYARHFLSCCSHILGLVTTPS 234
Query: 329 GVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKG 388
V+ + R V AFPIGID D+F L+ P+VQ+ I L+ +F G K+M+ VDRLD IKG
Sbjct: 235 SVKFKDRSVAVGAFPIGIDPDKFTEGLKSPKVQNRIASLENKFQGTKLMVSVDRLDYIKG 294
Query: 389 IPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448
IPQK+ A E FL ++P W KVVL+Q+AVP+R DV EYQ L + V+E+VGRING++GT+
Sbjct: 295 IPQKLHALEVFLSQHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVD 354
Query: 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG 508
+PIH + +S+ F L ALYA +D +V+S RDGMNLVS+E+VA Q +KGVLILSEFAG
Sbjct: 355 YMPIHFMHKSVSFDELIALYAASDACVVSSTRDGMNLVSFEYVATQQKRKGVLILSEFAG 414
Query: 509 AAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVS 568
AAQSL G+I+VNPWN E+AS+ A++M D R ++ + +++ +TS W +FV+
Sbjct: 415 AAQSLN-GSIVVNPWNTEELASAYHEAVSMSDDLRAQKFEKLYKYISKYTSAFWGKSFVA 473
Query: 569 ELN 571
EL+
Sbjct: 474 ELS 476
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/471 (49%), Positives = 327/471 (69%), Gaps = 15/471 (3%)
Query: 107 LLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEA-RWIGWAGVNVPDEIGQKA 165
+LV++NRLPV+ R + +++ +S GGLV+AL G+++ +W GW G+ +P++ +
Sbjct: 4 VLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDKPRL 63
Query: 166 LTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAY 225
+ C+PVF+D++ +YNG+ N++LWPLFHY P E Q ++AY
Sbjct: 64 INDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--PGEMNFD-----QVAWEAY 116
Query: 226 KRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNN------MKVGWFLHTPFPS 279
+AN++FAK V +I + GD+VW HDYHLM LP+ L+E N +K+G+FLHTPFPS
Sbjct: 117 TQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPS 176
Query: 280 SEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRV 339
SEI+R LP R E+L VL+ +L+GFHTYDYARHF+S+ +RIL LE P G +GR V
Sbjct: 177 SEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVV 236
Query: 340 AAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399
AFPIGID ++F+ + P VQ+ I +L+++F G KV++GVDRLD IKG+PQK+ AFE F
Sbjct: 237 GAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVF 296
Query: 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL 459
L E+P W KVVL+Q+AVP+R V EYQ L + V+E+VGRING +GT+ PIH + RS+
Sbjct: 297 LSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSV 356
Query: 460 DFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAIL 519
DF+ L ALY+I+DV V+S RDGMNLVSYE+VACQ K G LILSEF GAAQSL GA++
Sbjct: 357 DFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLN-GALI 415
Query: 520 VNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570
VNPWN ++A ++ +L +++ + H F +V+ +TSQ W FVSEL
Sbjct: 416 VNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 323/487 (66%), Gaps = 16/487 (3%)
Query: 92 STDNGE-RLEGRCKQRLLVVANRLPVSAVRRGEDS-WQLEISVGGLVSALLGVRE-FEAR 148
+TDN + +L ++VV+NRLPV+ + ++ +S GGLV+AL G+++ + +
Sbjct: 2 TTDNAKAQLTSSSGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFK 61
Query: 149 WIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQ 208
W GW G+ +PD+ + L + +P+FL +E +YNG+ N++LWPLFHY P
Sbjct: 62 WFGWPGLEIPDDEKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PG 119
Query: 209 EDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLK-----EY 263
E ++ + AY ANQ F + D++W HDYHLM +P+ L+ +
Sbjct: 120 EINFD-----ENAWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQ 174
Query: 264 NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGL 323
N+KVGWFLHTPFPSSEI+R LP R E+L+ VL+ DLVGFHTYDYARHF+S+ R+L +
Sbjct: 175 LQNVKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNV 234
Query: 324 EGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL 383
P GVE QGR V AFPIGID D+F L+ VQ I +LKE F G K+++GVDRL
Sbjct: 235 NTLPNGVEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRL 294
Query: 384 DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 443
D IKG+PQK+ A E FL E+P WR KVVL+Q+AVP+R DV EYQ L S V+E+VGRING+
Sbjct: 295 DYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQ 354
Query: 444 YGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLIL 503
+GT+ VPIH + +S+ F L +LYA++DV LV+S RDGMNLVSYE++ACQ KKG LIL
Sbjct: 355 FGTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLIL 414
Query: 504 SEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWA 563
SEF GAAQSL GAI+VNPWN +++ +I AL +P ++E + +++ +TS W
Sbjct: 415 SEFTGAAQSLN-GAIIVNPWNTDDLSDAINEALTLPDVKKEVNWEKLYKYISKYTSAFWG 473
Query: 564 ATFVSEL 570
FV EL
Sbjct: 474 ENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/470 (49%), Positives = 322/470 (68%), Gaps = 13/470 (2%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQK 164
RLL+V+NRLP++ R + + +S GGLVS L G+ + +W GW G+ VP+E
Sbjct: 14 RLLLVSNRLPITIKRSDDGRYDFSMSSGGLVSGLSGLSKSTTFQWYGWPGLEVPEEEIPV 73
Query: 165 ALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDA 224
+ E +PVF+D+E ++YNG+ N++LWPLFHY P E +S ++A
Sbjct: 74 VKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD-----ESAWEA 126
Query: 225 YKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE----YNNNMKVGWFLHTPFPSS 280
YK AN++FAK V ++GD++W HDYHLM LP+ L+E N+K+G+FLHTPFPSS
Sbjct: 127 YKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDSKENVKIGFFLHTPFPSS 186
Query: 281 EIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVA 340
EI+R LP R ELL VL DL+GFHTYDY RHF+SAC+R+LGL TP G+E QG++
Sbjct: 187 EIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPNGIEFQGKIIACG 246
Query: 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400
AFPIGID ++F L+ +VQ I L+++F G K+M+GVDRLD IKG+PQK+ A E FL
Sbjct: 247 AFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVPQKLHALEVFL 306
Query: 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLD 460
++P W KVVL+Q+AVP+R DV EYQ L + V+E+VGRING++GT+ +PIH L +S++
Sbjct: 307 SDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHKSVN 366
Query: 461 FHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILV 520
F L ALYA++D +V+S RDGMNLV+YE++A Q + GVL+LSEFAGAAQSL G+I++
Sbjct: 367 FDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVLSEFAGAAQSLN-GSIII 425
Query: 521 NPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570
NPWN E+A + A+ M ++R +V +TS W +FV+EL
Sbjct: 426 NPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 942 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.972 | 0.972 | 0.739 | 0.0 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.762 | 0.903 | 0.653 | 8.9e-270 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.713 | 0.916 | 0.443 | 5.2e-152 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.509 | 0.935 | 0.498 | 1.1e-124 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.502 | 0.955 | 0.488 | 1.5e-122 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.518 | 0.968 | 0.474 | 4e-122 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.438 | 0.476 | 0.378 | 4.6e-122 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.486 | 0.865 | 0.494 | 1.7e-121 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.415 | 0.454 | 0.395 | 4e-120 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.484 | 0.953 | 0.493 | 6e-119 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3511 (1241.0 bits), Expect = 0., P = 0.
Identities = 697/942 (73%), Positives = 763/942 (80%)
Query: 25 MPGNKYNSSXXXXXXXXXXXXXXXXXXK-----NRSFLQNE--GEPDFFASESFLNASES 77
MPGNKYN S + NR+ N+ G + ++ L S
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVAGSSENSENDLRLEGDSS 60
Query: 78 WGPIDE--EEFAGTRSSTDNGERLEGRC--KQRLLVVANRLPVSAVRRGEDSWQLEISVG 133
+++ E A + D ER E R +QRLLVVANRLPVSAVRRGEDSW LEIS G
Sbjct: 61 RQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLEISAG 120
Query: 134 GLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEETVHQYYNGYC 193
GLVSALLGV+EFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDEE VHQYYNGYC
Sbjct: 121 GLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYC 180
Query: 194 NNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHL 253
NN+LWPLFHYLGLPQEDRLATTRSFQSQF AYK+ANQMFA VVN YEEGDVVWCHDYHL
Sbjct: 181 NNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHL 240
Query: 254 MFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHF 313
MFLP+CLKEYN+ MKVGWFLHTPFPSSEIHRTLPSR+ELLRSVLAADLVGFHTYDYARHF
Sbjct: 241 MFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHF 300
Query: 314 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG 373
VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRF+RALE+P+V H+ ELKERFAG
Sbjct: 301 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAG 360
Query: 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQV 433
RKVMLGVDRLDMIKGIPQKILAFEKFLEEN +WRDKVVL+QIAVPTRTDVPEYQKLTSQV
Sbjct: 361 RKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQV 420
Query: 434 HEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493
HEIVGRINGR+GTLT VPIHHLDRSLDFHALCALYA+TDVALVTSLRDGMNLVSYEFVAC
Sbjct: 421 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVAC 480
Query: 494 QASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553
Q +KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA+SIG ALNM A+EREKRH HNF H
Sbjct: 481 QEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHH 540
Query: 554 VTTHTSQEWAATFVSELNDTIVEAQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATL 613
V THT+QEWA TFVSELNDT++EAQ+R +VPP LP A+ Y +SNNRLLILGFNATL
Sbjct: 541 VKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGFNATL 600
Query: 614 TAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673
T PVD GRRG QI+EM+ LHP+LK PLK LC DP TT+VVLSGS R+VLD NFGEY+M
Sbjct: 601 TEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYDM 660
Query: 674 WLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNY 733
WLAAENGMFLRLT GEWMTTMPE+LNM+WVDSVKHVF+YFTERTPRSHFE R+TSL+WNY
Sbjct: 661 WLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNY 720
Query: 734 KYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVR 793
KYAD+EFGRLQARD+LQHLW+GPISNASVDVVQG RSVEVRAVGVTKGAAIDRILGEIV
Sbjct: 721 KYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVH 780
Query: 794 HKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPA----------GPRANAADHLRR 843
K + TPIDYVLCIGHFL KDED+YTFFEPELP + PA G ++++ D R
Sbjct: 781 SKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDR-RP 839
Query: 844 SSISQIPQAKSGPKVRF--RKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSS--VL 899
S S KSG K + S +R + + G R E S VL
Sbjct: 840 PSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISWNVL 899
Query: 900 DLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAECPQS 941
DL+GENYFSC V R R+NARY LGS DVV L +LA+ S
Sbjct: 900 DLKGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2500 (885.1 bits), Expect = 8.9e-270, Sum P(2) = 8.9e-270
Identities = 478/732 (65%), Positives = 577/732 (78%)
Query: 104 KQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQ 163
+ RLLVV+ LPV+A R GE+SW +S GGLVSALLG++EFE +WIGW GV+V D IG+
Sbjct: 3 RPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAIGK 62
Query: 164 KALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFD 223
K L+ LAEK CIPVFL EE QYYNGYCNN+LWP+FHYLG P E R T ++QSQ++
Sbjct: 63 KTLSITLAEKGCIPVFL-EEVCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQYE 121
Query: 224 AYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH 283
AYK+ANQ+F VV YEEGDVVWCHDYH+M LPQ LKEYN+ MKVGWFLHTPFPSSE++
Sbjct: 122 AYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEMY 181
Query: 284 RTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFP 343
+TLPSR++LLRSVL ADLVGFHTYD+ARHF++AC ILG+E T EG+ DQG++TRVA FP
Sbjct: 182 KTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAVFP 241
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
IGI+ +RF+ EL +V ++ + K F GRK++LGVDRLD IKGIPQK AFEKFLEEN
Sbjct: 242 IGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEEN 301
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
WR KV+L+QIAVPTR + EYQK+ Q H VGRINGR+G++++VPI HLD S+DF+
Sbjct: 302 AEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFNQ 361
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW 523
LCALYAITDV LVTSLRDGMNLVS EF+ACQ ++KGVLILSEFAGA QSLGAGAILVNPW
Sbjct: 362 LCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVNPW 421
Query: 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFV---------SELNDTI 574
NI EV+S+IG ALNM +E+E++H NF +V TH++Q+WA F+ S+L +
Sbjct: 422 NIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEIT 481
Query: 575 VEAQIRTRQVPP-SLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPK 633
A++ LP + Y +SNNRLLILGF TLT P+ RRG M +
Sbjct: 482 TSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MNLE 538
Query: 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTT 693
LHP LKE LK LC DP TTVVVLS S++ +LD NFGEYNMWLAAENGMFLR T+GEW+T
Sbjct: 539 LHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWVTR 598
Query: 694 MPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLW 753
+PE++N++W+D VKHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARD+LQHLW
Sbjct: 599 IPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHLW 658
Query: 754 SGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQK 813
+GPISNASVDVV+GG+SVEV AVGVTKG+A++RILGEIV +K + TPIDYVLCIG FL K
Sbjct: 659 AGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLGK 718
Query: 814 DEDIYTFFEPEL 825
DED+YTFFEPEL
Sbjct: 719 DEDVYTFFEPEL 730
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 311/702 (44%), Positives = 435/702 (61%)
Query: 91 SSTDNGERLEGRCKQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWI 150
+ DN E RL+VV+NRLPVS + W ++S GGLV+AL G++ W+
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWV 60
Query: 151 GWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYL--GLP 207
GW G + +E +K + + L + CIPVFL E+ +++YNG+ N +LWPLFHYL L
Sbjct: 61 GWIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLD 119
Query: 208 QEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNM 267
+DR+ +++Y AN+ F+ VV I + D+VW HDYH+M LP+ LK+ +
Sbjct: 120 YDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA 170
Query: 268 KVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP 327
++G+FLH PFPSSEI R LP R E+L +L L+GFHTYDYARHF+ +CTRI+GLE P
Sbjct: 171 RIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAP 230
Query: 328 EGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIK 387
GV + R +V FP+GID D+F +L+ QVQ+ I ELKE F G KV++G+DRLD IK
Sbjct: 231 NGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIK 290
Query: 388 GIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTL 447
GIPQK+ A E+ ++ P W+ K+VLIQ+AVP+R DV EYQKL +V E+VGRING YG++
Sbjct: 291 GIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSI 350
Query: 448 TTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA 507
PIH+L +S+D L ALY I+D AL+TS+RDGMNLV+ E++ CQ GVLILSEF
Sbjct: 351 GYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFT 410
Query: 508 GAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFV 567
GAAQSL +GA+++NPWN EVA SI +L MP +ERE++H +VT HT+ W FV
Sbjct: 411 GAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 568 SELNDTIVEA-QIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQ 626
ELN ++ T Q L I+ VD Y QS RLLI ++ TL P + + +
Sbjct: 470 KELNKASSNTDKMVTIQ---KLDIEKVVDIYKQSKRRLLIFAYDGTLI-PYNNVPQLSRP 525
Query: 627 IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLT 686
+E+ D+ L +DP T V +LSG D+ L + F + L+AE G F +L
Sbjct: 526 SQELLNSF--DI------LSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLP 577
Query: 687 TG-EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQA 745
EW +P ++++ W ++++ +F+YFT RTP S FE +E W+Y+ AD FG +QA
Sbjct: 578 ESTEWEQQVP-SMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQA 636
Query: 746 RDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRI 787
R++ HL + P+ D G RS + + K D I
Sbjct: 637 RELHLHLDNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI 678
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
Identities = 247/495 (49%), Positives = 331/495 (66%)
Query: 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEA-RWIGWAGVNVPDEIGQ 163
+RL+VV+NRLP++ R+ ++ +S GGLVSAL G+++ +W+GW G +P++
Sbjct: 19 RRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMTFQWLGWCGQEIPEDEKP 78
Query: 164 KALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFD 223
+ + E IPVFLD+ET ++YNG+ N++LWPLFHY P E + ++
Sbjct: 79 MIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH--PGEINFD-----EENWE 131
Query: 224 AYKRANQMFAK-VVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNN----MKVGWFLHTPFP 278
AY+ AN FA+ +V N+ ++GD++W DYHLM LPQ L+E + +K+G+FLHTPFP
Sbjct: 132 AYRAANYAFAEAIVKNL-QDGDLIWVQDYHLMVLPQMLRELIGDKFKDIKIGFFLHTPFP 190
Query: 279 SSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTR 338
SSEI+R LP R E+L VL DLVGFHTYDYARHF+SAC+RIL L P GVE G++
Sbjct: 191 SSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILNLSTLPNGVEYNGQMVS 250
Query: 339 VAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEK 398
V FPIGID ++F AL+ V+D I ++ R G KV++GVDRLD IKG+PQK AFE
Sbjct: 251 VGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDRLDYIKGVPQKFHAFEV 310
Query: 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRS 458
FLE+ P W KVVL+Q+AVP+R DV EYQ L + V+E+VGRINGR+GT+ PIH L +S
Sbjct: 311 FLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGRFGTVEYTPIHFLHKS 370
Query: 459 LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAI 518
+ F L ALY ++DV L+TS RDGMNLVSYE++ Q + G LILSEFAGAAQSL G+I
Sbjct: 371 VRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALILSEFAGAAQSLN-GSI 429
Query: 519 LVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQ 578
++NPWN E+A+SI AL MP +RE F +V +TSQ W +FV EL +
Sbjct: 430 VINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFWGQSFVGELQRIQHYSH 489
Query: 579 IRTRQVPPSLPIKGA 593
R+ P L K A
Sbjct: 490 PHPRRTNPILRTKSA 504
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1205 (429.2 bits), Expect = 1.5e-122, P = 1.5e-122
Identities = 240/491 (48%), Positives = 327/491 (66%)
Query: 92 STDNGE-RLEGRCKQRLLVVANRLPVSAVRRGEDS-WQLEISVGGLVSALLGVRE-FEAR 148
+TDN + +L ++VV+NRLPV+ + ++ +S GGLV+AL G+++ + +
Sbjct: 2 TTDNAKAQLTSSSGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFK 61
Query: 149 WIGWAGVNVPDEIGQKALTKALAEK-RCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLP 207
W GW G+ +PD+ + + K L EK +P+FL +E +YNG+ N++LWPLFHY P
Sbjct: 62 WFGWPGLEIPDD-EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--P 118
Query: 208 QEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLK-----E 262
E ++ + AY ANQ F + D++W HDYHLM +P+ L+ +
Sbjct: 119 GEINFD-----ENAWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEK 173
Query: 263 YNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILG 322
N+KVGWFLHTPFPSSEI+R LP R E+L+ VL+ DLVGFHTYDYARHF+S+ R+L
Sbjct: 174 QLQNVKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLN 233
Query: 323 LEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDR 382
+ P GVE QGR V AFPIGID D+F L+ VQ I +LKE F G K+++GVDR
Sbjct: 234 VNTLPNGVEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDR 293
Query: 383 LDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRING 442
LD IKG+PQK+ A E FL E+P WR KVVL+Q+AVP+R DV EYQ L S V+E+VGRING
Sbjct: 294 LDYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRING 353
Query: 443 RYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLI 502
++GT+ VPIH + +S+ F L +LYA++DV LV+S RDGMNLVSYE++ACQ KKG LI
Sbjct: 354 QFGTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLI 413
Query: 503 LSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEW 562
LSEF GAAQSL GAI+VNPWN +++ +I AL +P ++E + +++ +TS W
Sbjct: 414 LSEFTGAAQSLN-GAIIVNPWNTDDLSDAINEALTLPDVKKEVNWEKLYKYISKYTSAFW 472
Query: 563 AATFVSELNDT 573
FV EL T
Sbjct: 473 GENFVHELYST 483
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
Identities = 240/506 (47%), Positives = 341/506 (67%)
Query: 104 KQRLLVVANRLPVSAVRRGEDS-WQLEISVGGLVSALLGVREFEA-RWIGWAGVNVPDEI 161
+ RLL+V+NRLP++ ++R ED + +S GGLVS L G+ + +W GW G+ VP+E
Sbjct: 11 ESRLLLVSNRLPIT-IKRSEDGKYDFSMSSGGLVSGLSGLSKTTTFQWYGWPGLEVPEEE 69
Query: 162 GQKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQ 221
+ E IPVF+D+E ++YNG+ N++LWPLFHY P E +S
Sbjct: 70 IPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD-----ESA 122
Query: 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY----NNNMKVGWFLHTPF 277
++AYK AN++FA+ V + ++GD++W HDYHLM LP+ L+E N+K+G+FLHTPF
Sbjct: 123 WEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNTKKNIKIGFFLHTPF 182
Query: 278 PSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLT 337
PSSEI+R LP R ELL +L DL+GFHTYDY RHF+SAC+R+LGL TP G+E QG++
Sbjct: 183 PSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNGIEFQGKII 242
Query: 338 RVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFE 397
AFPIGID ++F L+ +VQ I L+++F G K+M+GVDRLD IKG+PQK+ A E
Sbjct: 243 ACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHALE 302
Query: 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR 457
FL ++P W KVVL+Q+AVP+R DV EYQ L + V+E+VGRING++GT+ +PIH L +
Sbjct: 303 VFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHK 362
Query: 458 SLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGA 517
S++F L ALYA++D +V+S RDGMNLVSYE++A Q + G L+LSEFAGAAQSL G+
Sbjct: 363 SVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLN-GS 421
Query: 518 ILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEA 577
I+VNPWN E+A++ A+ M ++R +V +TS W +FV+EL T +
Sbjct: 422 IIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL--TRISE 479
Query: 578 QIRTRQVPPSLPIKGAVDSYLQSNNR 603
Q + P+ G S L+++++
Sbjct: 480 QAAGKLPTKETPVNGET-SKLETSSQ 504
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 725 (260.3 bits), Expect = 4.6e-122, Sum P(4) = 4.6e-122
Identities = 161/425 (37%), Positives = 240/425 (56%)
Query: 85 EFAGTRSSTDNGERLEGRCKQRLLVVANRLPVSAVRRGEDS-WQLEISVGGLVSALL-GV 142
E G S + ++R ++VAN LP+ A R E W L+ L G
Sbjct: 39 ELDGGYSDGSSDVNSSNSSRERKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGF 98
Query: 143 R-EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLF 201
+ E +IG ++ ++ K L + C+P FL +E ++Y G+C + LWPLF
Sbjct: 99 SSDTEFVYIGSLNADIGISEQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLF 158
Query: 202 HYLGLPQ-EDRLATTRSFQSQFDAYKRANQMFA-KVVNNIYEEGDVVWCHDYHLMFLPQC 259
HY+ LP D R + + AY AN++F+ +V+ I E D VW HDYHLM LP
Sbjct: 159 HYM-LPMFPDH--GDRFDRRLWQAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTF 215
Query: 260 LKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTR 319
L++ N +K+G+FLH+PFPSSEI+RTLP R +LLR +L DL+GFHT+DYARHF+S C+R
Sbjct: 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSR 275
Query: 320 ILGLEGTPE----GVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRK 375
+LGL+ + G++ GR + P+GI R L LP + E++E+F G+K
Sbjct: 276 MLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKK 335
Query: 376 VMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHE 435
++LGVD +D+ KGI K++A E+ E R K+VLIQI P R + ++ + +
Sbjct: 336 LILGVDDMDIFKGISLKLIAMERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYS 395
Query: 436 IVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA 495
RIN RYG+ P+ +DR + + A YA+ D LV ++RDGMNLV Y+++ C+
Sbjct: 396 TAKRINERYGSAGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQ 455
Query: 496 SKKGV 500
G+
Sbjct: 456 GTPGM 460
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 233/471 (49%), Positives = 323/471 (68%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEA-RWIGWAGVNVPDEIGQK 164
RLL+++NRLP++ R + + +S GGLV+ L G+ + + +W GW G+ VPD
Sbjct: 15 RLLLISNRLPITIKRSDDGQYSFSMSSGGLVTGLSGLAKTTSFQWYGWPGLEVPDAEAGP 74
Query: 165 ALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDA 224
+ + E PVF+D+E ++YNG+ N++LWPLFHY P E +S + A
Sbjct: 75 VVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--PGEITFD-----ESAWSA 127
Query: 225 YKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY----NNNMKVGWFLHTPFPSS 280
YK N++FA+ V ++GD++W HDYHLM LP+ L+E N+K+G+FLHTPFPSS
Sbjct: 128 YKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDSKKNVKIGFFLHTPFPSS 187
Query: 281 EIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVA 340
EI+R LP R LL+ VL DL+GFHTYDYARHF+S+C+RIL TP GV+ GR V
Sbjct: 188 EIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNGVQFAGRFVTVG 247
Query: 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400
AFPIGID ++FV L+ P+VQ I L +F G K+++GVDRLD IKG+PQK+ A E FL
Sbjct: 248 AFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVFL 307
Query: 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLD 460
E+P W K+VL+Q+AVP+R DV EYQ L + V+E+VGRING++GT+ +PIH L +S+
Sbjct: 308 TEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSVS 367
Query: 461 FHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILV 520
F L ALYA++DV LV+S RDGMNLVSYE++A Q + GV+ILSEF GAAQSL +G+++V
Sbjct: 368 FDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMILSEFTGAAQSL-SGSLIV 426
Query: 521 NPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571
NPWN E+A++I A+ M ++RE +V +TS W ++FV+ELN
Sbjct: 427 NPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWGSSFVAELN 477
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 749 (268.7 bits), Expect = 4.0e-120, Sum P(3) = 4.0e-120
Identities = 167/422 (39%), Positives = 248/422 (58%)
Query: 104 KQRLLVVANRLPVSAVRR------GEDS--------WQLEISVGGLVSAL---LGVREFE 146
K R+++VAN LP+ A RR G S W L+ L LG E
Sbjct: 52 KDRIIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIE 111
Query: 147 ARWIGWAGVNVP-DEIGQKALTKALAEK-RCIPVFLDEETVHQYYNGYCNNMLWPLFHYL 204
++G +P +E Q+ + + L E +C+P FL + +YY+G+C LWPLFHY+
Sbjct: 112 VIYVGCLKEEIPLNE--QEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYM 169
Query: 205 GLPQEDRLATTRSFQSQFDAYKRANQMFA-KVVNNIYEEGDVVWCHDYHLMFLPQCLKEY 263
LP L R ++ + AY N++FA +++ I E D VW HDYHLM LP L++
Sbjct: 170 -LPLSPDLGG-RFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKR 227
Query: 264 NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGL 323
N +K+G+FLH+PFPSSEI++TLP R ELLR++L +DL+GFHT+DYARHF+S C+R+LGL
Sbjct: 228 FNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGL 287
Query: 324 EGTPE----GVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA--GRKVM 377
+ G+E GR + P+GI + L LP+ + + EL ER+ GR ++
Sbjct: 288 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTML 347
Query: 378 LGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIV 437
LGVD +D+ KGI K+LA E+ L ++P W+ KVVL+QIA P R + +++ ++ + V
Sbjct: 348 LGVDDMDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTV 407
Query: 438 GRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC-QAS 496
RIN +G PI +D L F+ A Y + + LVT++RDGMNL+ YE++ Q +
Sbjct: 408 KRINETFGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGN 467
Query: 497 KK 498
+K
Sbjct: 468 EK 469
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 233/472 (49%), Positives = 324/472 (68%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREF-EARWIGWAGVNVPDEIGQK 164
++LVV+NR+PV+ R S+ +S GGLV+AL G+++ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 165 ALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDA 224
+ ++ C +FL + +YNG+ N++LWPLFHY P E ++ + A
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 225 YKRANQMFA-KVVNNIYEEGDVVWCHDYHLMFLPQCLK-EYNN---NMKVGWFLHTPFPS 279
Y AN+ FA ++V + ++ D++W HDYHLM LP+ L+ E N N+K+G+FLHTPFPS
Sbjct: 118 YIEANKKFALEIVKQVNDD-DMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPS 176
Query: 280 SEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGT-PEGVEDQGRLTR 338
SEI+R LP R E+L VL+ DL+GFHTYDYARHF+S+ +RI+ T P G++ QGR
Sbjct: 177 SEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSIS 236
Query: 339 VAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEK 398
+ AFPIGID D F+ L+ V + I +LK +F KV++GVDRLD IKG+PQK+ AFE
Sbjct: 237 IGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEV 296
Query: 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRS 458
FL ENP W KVVL+Q+AVP+R DV EYQ L S V E+VGRING +GT+ VPIH+L +S
Sbjct: 297 FLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKS 356
Query: 459 LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAI 518
+ F L +LY I+DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA+
Sbjct: 357 IPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GAL 415
Query: 519 LVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570
+VNPWN +++ +I +L +P ++RE F +++ +TS W +FV EL
Sbjct: 416 IVNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKEL 467
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7484 | 0.9681 | 0.9681 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_1680018 | hypothetical protein (922 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| estExt_fgenesh4_pg.C_LG_III0902 | hypothetical protein (662 aa) | • | 0.702 | ||||||||
| PtpRR9 | pseudo response regulator (541 aa) | • | 0.683 | ||||||||
| fgenesh4_pg.C_scaffold_122000043 | hypothetical protein (472 aa) | • | 0.683 | ||||||||
| estExt_fgenesh4_pm.C_LG_VI0700 | hypothetical protein (664 aa) | • | 0.683 | ||||||||
| estExt_fgenesh4_pg.C_LG_X0958 | hypothetical protein (587 aa) | • | 0.683 | ||||||||
| gw1.XII.661.1 | hypothetical protein (269 aa) | • | • | • | 0.581 | ||||||
| gw1.XV.542.1 | hypothetical protein (267 aa) | • | • | • | 0.580 | ||||||
| gw1.II.1542.1 | hypothetical protein (305 aa) | • | • | 0.514 | |||||||
| estExt_fgenesh4_pg.C_LG_V1131 | hypothetical protein (1171 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_XIV1950 | hypothetical protein (750 aa) | • | 0.510 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 942 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 0.0 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-147 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 4e-84 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 3e-83 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 1e-69 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 3e-24 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 3e-09 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 8e-05 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 0.001 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1779 bits (4610), Expect = 0.0
Identities = 734/932 (78%), Positives = 788/932 (84%), Gaps = 23/932 (2%)
Query: 25 MPGNKYN-SSPLTPRTRLERLLRERELRK-NRSFLQNEGEPDFFASESFLNASE-----S 77
MPGNKYN S + P +R+ERLLRERELRK RS N+ SE+F N +
Sbjct: 1 MPGNKYNGQSSVNPTSRVERLLRERELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDN 60
Query: 78 WGPIDEEEFAGT----RSSTDNGERLEGR--CKQRLLVVANRLPVSAVRRGEDSWQLEIS 131
E+ + D ER EGR +QRLLVVANRLPVSAVRRGEDSW LEIS
Sbjct: 61 DSSSHVEQLLEGAAAESALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEIS 120
Query: 132 VGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEETVHQYYNG 191
GGLVSALLGV+EFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDEE VHQYYNG
Sbjct: 121 AGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNG 180
Query: 192 YCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDY 251
YCNN+LWPLFHYLGLPQEDRLATTRSFQSQF AYK+ANQMFA VVN YEEGDVVWCHDY
Sbjct: 181 YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDY 240
Query: 252 HLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYAR 311
HLMFLP+CLKEYN+NMKVGWFLHTPFPSSEIHRTLPSR+ELLRSVLAADLVGFHTYDYAR
Sbjct: 241 HLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYAR 300
Query: 312 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF 371
HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRF+RALE PQVQ HI ELKERF
Sbjct: 301 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF 360
Query: 372 AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTS 431
AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENP WRDKVVL+QIAVPTRTDVPEYQKLTS
Sbjct: 361 AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTS 420
Query: 432 QVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFV 491
QVHEIVGRINGR+GTLT VPIHHLDRSLDFHALCALYA+TDVALVTSLRDGMNLVSYEFV
Sbjct: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFV 480
Query: 492 ACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551
ACQ SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVA+SI ALNMP +EREKRH HNF
Sbjct: 481 ACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNF 540
Query: 552 MHVTTHTSQEWAATFVSELNDTIVEAQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNA 611
MHVTTHT+QEWA TFVSELNDT+VEAQ+RTRQVPP LP + A+ YLQSNNRLLILGFNA
Sbjct: 541 MHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNA 600
Query: 612 TLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671
TLT PVD GRRG QI+EME +LHP+LKEPL+ LC DP TT+VVLSGSDR+VLD+NFGE+
Sbjct: 601 TLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660
Query: 672 NMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVW 731
+MWLAAENGMFLR T GEWMTTMPE+LNMDWVDSVKHVFEYFTERTPRSHFE RETSLVW
Sbjct: 661 DMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVW 720
Query: 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEI 791
NYKYAD+EFGRLQARD+LQHLW+GPISNA+VDVVQG RSVEVR VGVTKGAAIDRILGEI
Sbjct: 721 NYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEI 780
Query: 792 VRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQ 851
V K + TPIDYVLCIGHFL KDEDIYTFFEPELP +SPA R+ + D L +SS + P
Sbjct: 781 VHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGL-KSSGDRRPS 839
Query: 852 AKSGPKV------RFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGEN 905
K + +KQRSL S + N+ + R G SVLDL+GEN
Sbjct: 840 GKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAA---SHGSDRRPSPEKIGWSVLDLKGEN 896
Query: 906 YFSCTVSRKRSNARYFLGSSGDVVTLLNELAE 937
YFSC V RKRSNARY LGSS DVV+ L ELA
Sbjct: 897 YFSCAVGRKRSNARYLLGSSDDVVSFLKELAN 928
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1370 bits (3548), Expect = 0.0
Identities = 561/833 (67%), Positives = 665/833 (79%), Gaps = 58/833 (6%)
Query: 104 KQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQ 163
+ RLLVVANRLPVSA R GEDSW LE+S GGLVSALLGV+EFE +WIGW GV+V DEIG+
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGK 69
Query: 164 KALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFD 223
ALT++LAEK CIPVFL+E QYYNGYCNN+LWP+FHY+GLPQEDR TR+F+SQ+D
Sbjct: 70 AALTESLAEKGCIPVFLNE-VFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYD 128
Query: 224 AYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH 283
AYK+AN+MF VV YEEGDVVWCHDYHLMFLPQ LKEYNN MKVGWFLHTPFPSSEI+
Sbjct: 129 AYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIY 188
Query: 284 RTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFP 343
+TLPSR+ELLR+VL ADL+GFHTYD+ARHF+SACTRILG+EGT EGV DQG++TRVA FP
Sbjct: 189 KTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
IGID +RF+ ELP+V+ H+ ELK FAGRKV+LGVDRLDMIKGIPQK LAFEKFLEEN
Sbjct: 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P WRDKV+L+QIAVPTR DVPEYQKL SQVHE+VGRINGR+G++++VPIHHLD S+DF+
Sbjct: 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNY 368
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW 523
LCALYAITDV LVTSLRDGMNLVSYEFVACQ +KKGVL+LSEFAGA QSLGAGA+LVNPW
Sbjct: 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPW 428
Query: 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQIRTRQ 583
NITEV+S+I ALNM +ERE RH HNF +V TH++Q+WA F+SELND IVEA++RTR
Sbjct: 429 NITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488
Query: 584 VPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLK 643
+P LP + + Y +SNNRLLILGF TLT P R QI+EM+ LHP+LKE LK
Sbjct: 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLK 542
Query: 644 RLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWV 703
LC DP TTVVVLS S +++LD NFGEYN+WLAAENGMFLR T+GEW+TTMPE++N+DWV
Sbjct: 543 ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWV 602
Query: 704 DSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVD 763
D VK+VF+YFT+RTPRS+ E ETSLVWNY+YAD+EFGR QARD+LQHLW+GPISNASVD
Sbjct: 603 DGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVD 662
Query: 764 VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823
VV+G +SVEV A+GVTKGAAI RILGEIV +K + TPID+V C G+FL+KDED+YTFFEP
Sbjct: 663 VVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEP 722
Query: 824 ELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWR 883
E+ + + S ++KVS
Sbjct: 723 EI------------------------------LSKKKSSSSNYSDSDKKVS--------- 743
Query: 884 PAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELA 936
S+++DL+GENYFSC + + R+ ARY L SS DVV+LL++LA
Sbjct: 744 ------------SNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLA 784
|
Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 716 bits (1850), Expect = 0.0
Identities = 255/469 (54%), Positives = 313/469 (66%), Gaps = 15/469 (3%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQK 164
RL+VV+NRLPV R G LE S GGL ALLG + W GW+G V ++ G+
Sbjct: 1 RLIVVSNRLPVPITRGG-----LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEP 55
Query: 165 ALTKALAEK-RCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFD 223
L L K PVFL EE V YYNG+ N+ LWPLFHY P R ++
Sbjct: 56 FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYR--PDLIRYDRK-----AWE 108
Query: 224 AYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH 283
AY+R N++FA+ + + + GD+VW HDYHLM LP L+E K+G+FLH PFPSSEI+
Sbjct: 109 AYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIY 168
Query: 284 RTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFP 343
RTLP R ELL +LA DLVGF TYD AR+F+SA +R LGLE P GVE GR RV AFP
Sbjct: 169 RTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFP 228
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
IGID DRF + P VQ I EL+E GRK+++GVDRLD KG+P+++LAFE+FLEE+
Sbjct: 229 IGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEH 288
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P WR KVVL+QIAVP+R DVPEYQ+L QV E+VGRINGR+GTL PI +L+RS D
Sbjct: 289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREE 348
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW 523
L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAAQ L GA+LVNP+
Sbjct: 349 LMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-GALLVNPY 407
Query: 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELND 572
+I +A +I AL MP +ERE+RH + + Q W F+S+LN
Sbjct: 408 DIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 726 bits (1877), Expect = 0.0
Identities = 299/712 (41%), Positives = 428/712 (60%), Gaps = 44/712 (6%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNV---PDEI 161
RL++V+NRLPV+ V R + +L SVGGL + L W+GW G+++ +E
Sbjct: 2 RLIIVSNRLPVT-VVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQ 60
Query: 162 GQKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLG--LPQEDRLATTRSFQ 219
+ + L E +PVFL E V +YY G+CN+ LWPLFHY EDR
Sbjct: 61 RAR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRF------- 112
Query: 220 SQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS 279
+++Y+R NQ FA+ + I GDVVW HDY LM LP L+E + ++G+FLH PFPS
Sbjct: 113 --WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 280 SEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRV 339
E+ R LP R E+L +L ADL+GFHTYDY RHF+S+ R+LG E + GR+ RV
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRV 230
Query: 340 AAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399
AFP+GID D+F + + P+VQ+ I L++ GRK++L +DRLD KGIP+++LAFE+F
Sbjct: 231 DAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290
Query: 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL 459
LE+NP WR KV L+Q+AVP+RT VP+YQ++ ++ E+VGRING +GT+ PIH+ RSL
Sbjct: 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSL 350
Query: 460 DFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAIL 519
F L ALY DVALVT LRDGMNLV+ E+VA + GVLILSE AGAA L A A+L
Sbjct: 351 PFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALL 409
Query: 520 VNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQI 579
VNP +I +A++I AL MP +E+ +R + + +WA+ F+ EL + + +
Sbjct: 410 VNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKA 469
Query: 580 RTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKL---HP 636
+ + + Y ++ RLL+L ++ TL P+L
Sbjct: 470 FASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPD------------PELAVPDK 517
Query: 637 DLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPE 696
+L++ L+RL DP T V ++SG DR+ L+ FG+ + L AE+G + R GEW + E
Sbjct: 518 ELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ--LLE 575
Query: 697 NLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGP 756
+ +W D+V+ + E F +RTP S E +E SL W+Y+ AD E G +A +++ L S
Sbjct: 576 PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILAL-SSL 634
Query: 757 ISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIG 808
+SNA ++V++G + VEVR GV KG A+ R+L P D+VL IG
Sbjct: 635 LSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL--------EAGPYDFVLAIG 678
|
Length = 726 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 713 bits (1842), Expect = 0.0
Identities = 276/474 (58%), Positives = 344/474 (72%), Gaps = 10/474 (2%)
Query: 105 QRLLVVANRLPVSAVRRGEDSWQLEI--SVGGLVSALLGV-REFEARWIGWAGVNVPDEI 161
RL+VV+NRLPV+A R E W+ I S GGLVSAL G+ E W+GW GV V ++
Sbjct: 1 SRLVVVSNRLPVTAKREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 162 GQKALTKALAEKR-CIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS 220
+ +++ L EK C+PVFLD+E V +YYNG+ N++LWPLFHY P + +S
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNE----DEFDRS 116
Query: 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS 280
+DAY + N++FA + +Y++GD++W HDYHLM LPQ L++ + K+G+FLH PFPSS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 281 EIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEG-VEDQGRLTRV 339
EI R LP R E+LR +L ADL+GFHTYDYARHF+S C+R+LGLE T +G VE GR V
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGGVEYGGRTVSV 236
Query: 340 AAFPIGIDSDRFVRALELPQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEK 398
AFPIGID R L+ P VQ+ + ELKERF +K++LGVDRLD IKGIPQK+LAFE+
Sbjct: 237 GAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFER 296
Query: 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRS 458
FLEE P WR KVVL+QIAVP+R DV EYQ L SQV E+VGRING +GTL P+HHL RS
Sbjct: 297 FLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRS 356
Query: 459 LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAI 518
LDF L ALYAI DV LVTSLRDGMNLV+YE+VACQ +KGVLILSEFAGAAQSL GAI
Sbjct: 357 LDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAI 416
Query: 519 LVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELND 572
LVNPW+I EVA +I AL M +ER+KRH F +++ H Q WA +F+S+L
Sbjct: 417 LVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 665 bits (1718), Expect = 0.0
Identities = 245/468 (52%), Positives = 315/468 (67%), Gaps = 10/468 (2%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQK 164
RL+VV+NRLPVS R G+ ++ S GGL +AL G+ + W+GW+G+ +E +
Sbjct: 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 165 ALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDA 224
T+ L E PVFL E YYNG+ N +LWPLFHY RL R + ++A
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHY-------RLDLARFDREDWEA 113
Query: 225 YKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR 284
Y R N+ FA + + GD+VW HDYHL+ LPQ L+E + ++G+FLH PFPSSEI R
Sbjct: 114 YVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 285 TLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVED-QGRLTRVAAFP 343
LP R ELLR +L ADL+GF T YAR+F+S C+R+LGLE T +G + GR RV AFP
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFP 233
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
IGID D F + P+VQ+ EL+ER GRK+++GVDRLD KGIP+++LAFE+ LE
Sbjct: 234 IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P WR KVVL+QIAVP+RTDVPEYQ+L +V E+VGRING++GTL P+ +L RSL
Sbjct: 294 PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREE 353
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW 523
L ALY DVALVT LRDGMNLV+ E+VACQ GVLILSEFAGAA+ L GA+LVNP+
Sbjct: 354 LAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELS-GALLVNPY 412
Query: 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571
+I EVA +I AL MP +ER +RH +V TH Q WA +F+ +L
Sbjct: 413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 540 bits (1394), Expect = 0.0
Identities = 229/472 (48%), Positives = 303/472 (64%), Gaps = 15/472 (3%)
Query: 105 QRLLVVANRLPVSAVRRGEDSWQLEI-SVGGLVSALLGV-REFEARWIGWAGVNVPDEIG 162
RL+VV+NRLPV G+ + S GGLV+AL + R WIGW+G P +
Sbjct: 15 SRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDES 74
Query: 163 QKALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHY-LGLPQEDRLATTRSFQSQ 221
L + + E PV L +E YYNG+ N +LWPLFHY + +R +
Sbjct: 75 SDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYER--------NW 126
Query: 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSE 281
+DAY + N+ FA + IYE GD++W HDYHL+ +PQ L+E + K+G+FLH PFPSSE
Sbjct: 127 WDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE 186
Query: 282 IHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVED--QGRLTRV 339
+ R LP R E+L +L ADL+GF T YAR+F+ C+R+LG+ G + + GR+ +V
Sbjct: 187 VFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKV 246
Query: 340 AAFPIGIDSDRFVRALELPQVQDHINELK-ERFAGRKVMLGVDRLDMIKGIPQKILAFEK 398
AFPIGID + F RAL+ P VQ+ + ELK E +K+++GVDRLD KGIPQ++LAFE+
Sbjct: 247 GAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFER 306
Query: 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRS 458
LEE P WR KVVL+QIA P+R DV EYQ L Q+ E+VGRING +G+L+ P+H+L R
Sbjct: 307 LLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRD 366
Query: 459 LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAI 518
LD + L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAA L A+
Sbjct: 367 LDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDAL 425
Query: 519 LVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570
+VNPW+ EVA +I AL M +ER++RH V TH WA +F+ +L
Sbjct: 426 IVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 458 bits (1179), Expect = e-147
Identities = 282/793 (35%), Positives = 429/793 (54%), Gaps = 73/793 (9%)
Query: 104 KQRLLVVANRLPVSAVRR--GEDSWQLEISVGGLVSAL---LGVREFEARWIGWAGVNV- 157
K R+++VAN+LP+ A R+ G W L+ L LG E E ++G +
Sbjct: 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIH 118
Query: 158 PDEIGQKALTKALAEK-RCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTR 216
+E Q+ +++ L E +C+P FL + +YY+G+C LWPLFHY+ LP L R
Sbjct: 119 LNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYM-LPLSPDLGG-R 174
Query: 217 SFQSQFDAYKRANQMFA-KVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHT 275
+S + AY N++FA +++ I E D VW HDYHLM LP L++ N +K+G+FLH+
Sbjct: 175 FNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHS 234
Query: 276 PFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVE 331
PFPSSEI++TLP R ELLR++L +DL+GFHT+DYARHF+S C+R+LGL + G+E
Sbjct: 235 PFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294
Query: 332 DQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA--GRKVMLGVDRLDMIKGI 389
GR + P+GI + L LP+ + + EL ++F R ++LGVD +D+ KGI
Sbjct: 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGI 354
Query: 390 PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449
K+LA E+ L ++P W+ KVVL+QIA P R + +++ ++ H V RIN +G
Sbjct: 355 SLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGY 414
Query: 450 VPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS------------- 496
PI +D L F+ A Y + + LVT++RDGMNL+ YE++ +
Sbjct: 415 DPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474
Query: 497 --KKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV 554
KK +L++SEF G + SL +GAI VNPWNI VA ++ AL M E++ RH ++ +V
Sbjct: 475 TPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533
Query: 555 TTHTSQEWAATFVSELNDTIVE------------AQIRTRQVPPS---LPIKGAVDSYLQ 599
+TH WA +F+ +L T + R + P+ L ++ V +Y +
Sbjct: 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKR 593
Query: 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659
+ R ++L ++ TL ++ + L LC D V ++S
Sbjct: 594 TTTRAILLDYDGTLMPQA-----------SIDKSPSSKSIDILNTLCRDKNNMVFIVSAR 642
Query: 660 DRNVLDDNFGE-YNMWLAAENGMFLRLT-TGEWMTTMPENLNMDWVDSVKHVFEYFTERT 717
R L D F + +AAE+G FLRL EW T +P + W + V + +TE T
Sbjct: 643 SRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV-ADCSWKQIAEPVMQLYTETT 701
Query: 718 PRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVG 777
S E +ET+LVW Y+ AD +FG QA+++L HL S ++N V V G VEV+ G
Sbjct: 702 DGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLES-VLANEPVTVKSGQNIVEVKPQG 760
Query: 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANA 837
V+KG R+L I++ +G+ D+VLCIG + DED++ E+ S AGP
Sbjct: 761 VSKGLVAKRLL-SIMQERGMLP--DFVLCIGDD-RSDEDMF-----EVITSSMAGPSIAP 811
Query: 838 ADHLRRSSISQIP 850
+ ++ Q P
Sbjct: 812 RAEVFACTVGQKP 824
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 278 bits (713), Expect = 4e-84
Identities = 169/496 (34%), Positives = 249/496 (50%), Gaps = 45/496 (9%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLG-VREFEARWIGWAGVNVPDEIG-- 162
RL+VV+NR+ + S GGL +LG ++ W GW+G E G
Sbjct: 3 RLVVVSNRIAPPDEHKA--------SAGGLAVGILGALKAAGGLWFGWSG-----ETGNE 49
Query: 163 QKALTKALAEKRCIPVF-LDEETVHQYYNGYCNNMLWPLFHY-LGLPQEDRLATTRSFQS 220
+ L K F L E+ +YYN + N +LWP FHY L L Q R A
Sbjct: 50 DQPLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPA------- 102
Query: 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS 280
++ Y R N + A + + ++ D++W HDYHL+ L++ N ++G+FLH PFP+
Sbjct: 103 -WEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP 161
Query: 281 EIHRTLPSRTELLRSVLAADLVGFHTYDYARHF---VSACTRILGLEGTPEGVEDQGRLT 337
EI LP ELL + DL+GF T + F +S TR+ G + T
Sbjct: 162 EIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRT 221
Query: 338 RVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFE 397
V +PIGI+ D + P + + +LK + + V+RLD KG+P++ LA+E
Sbjct: 222 EV--YPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 278
Query: 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR 457
LE+ P K+ QIA +R DV YQ + Q+ GRING+YG L P+++L++
Sbjct: 279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338
Query: 458 SLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK-GVLILSEFAGAAQSLGAG 516
D L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L +
Sbjct: 339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS- 397
Query: 517 AILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE 576
A++VNP++ EVA+++ AL MP ER RH + + W F+S+L
Sbjct: 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDL------ 451
Query: 577 AQIRTRQVPPSLPIKG 592
+Q+ P
Sbjct: 452 -----KQIVPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 276 bits (707), Expect = 3e-83
Identities = 147/499 (29%), Positives = 238/499 (47%), Gaps = 51/499 (10%)
Query: 110 VANRLPVSAVR--RGEDSWQLEISVGGLVSALL---GVREFEARWIGWAGVNVPDEIGQK 164
+ +RLP R G+ + S G++ LL G W+ WA +
Sbjct: 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGR-AGTWVAWAEHDENSGETFD 59
Query: 165 ALTKALAEKRCIP--VFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQF 222
+ AE + + L +E V +Y+ WP+ H +F +F
Sbjct: 60 SHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH--------------TFPERF 105
Query: 223 -------DAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHT 275
+ + N+ FA+ EG VW HDY+L +P +++ ++K+ +F HT
Sbjct: 106 QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHT 165
Query: 276 PFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQ-- 333
PFPS+++ LP R +++ S+L D +GFH Y +FV A ++ L+ D
Sbjct: 166 PFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRF 225
Query: 334 -------------------GRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGR 374
R+ ++ A P+G D +R AL +++ + ++ AG
Sbjct: 226 ITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGV 285
Query: 375 KVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVH 434
K++L +R+D KGI +K+ A+E+ LE P KV L+ VP + + Y +L Q+
Sbjct: 286 KLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIE 345
Query: 435 EIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494
+ VGRINGR+ + P+ RSL + + A +A+ DV +T LRDG+NLV+ E+VA Q
Sbjct: 346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ 405
Query: 495 ASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV 554
GVL+LSEFAGAA L GA+L NP++ + +I AL MP E++ R F V
Sbjct: 406 GLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAV 464
Query: 555 TTHTSQEWAATFVSELNDT 573
+ Q WA F++ ++
Sbjct: 465 NYYDVQRWADEFLAAVSPQ 483
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 1e-69
Identities = 76/201 (37%), Positives = 107/201 (53%), Gaps = 4/201 (1%)
Query: 627 IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLT 686
L L RL DP TV ++SG R D FG N+ LAAE+G F+R
Sbjct: 13 EDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFEDLFFGVPNLGLAAEHGAFIRDP 72
Query: 687 TGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQAR 746
GE T + E ++DW V + E +TERTP S+ E ++++L W+Y+ AD +FG QA+
Sbjct: 73 GGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHYRNADDDFGVFQAK 132
Query: 747 DILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLC 806
++ +HL S V V QG + VEVR VGV+KG A +R+L E+ +P D+ LC
Sbjct: 133 ELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELG---SAGSPPDFPLC 189
Query: 807 IGHFLQKDEDIYTFFEPELPF 827
IG DED++ P
Sbjct: 190 IGDDRT-DEDMFDVVNPTKMS 209
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVL 656
YL + RLL L ++ TLT V E L L+ L DP V ++
Sbjct: 13 YLNARKRLLFLDYDGTLTEIVPH--------PEAAV-PDDRLLSLLQDLASDPRNVVAII 63
Query: 657 SGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTER 716
SG L+ FG + L AE+G +R G+W + E ++ W+ V + EY+ ER
Sbjct: 64 SGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVER 123
Query: 717 TPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAV 776
TP S+ E + ++ +Y+ A+ + G A L I+ + V G VE+R
Sbjct: 124 TPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----INELKLRVTPGKMVVELRPP 179
Query: 777 GVTKGAAIDRILGE 790
GV+KGAAI I+ E
Sbjct: 180 GVSKGAAIKYIMDE 193
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 3e-09
Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 6/156 (3%)
Query: 636 PDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMP 695
L L++L P + ++SG + LA E+G ++
Sbjct: 28 DRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNL 87
Query: 696 ENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYA-DLEFGRLQARDILQHLWS 754
W + E T R P E + +L W+Y+ A E R +A+++ + +
Sbjct: 88 TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL- 145
Query: 755 GPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGE 790
S ++V+ G VE++ V KG + R+L
Sbjct: 146 ---SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWH 178
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.7 bits (107), Expect = 8e-05
Identities = 66/325 (20%), Positives = 107/325 (32%), Gaps = 47/325 (14%)
Query: 225 YKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQ--CLKEYNNNMKVGWFLHTPFPSSEI 282
R + ++ D++ H L L + + LH P +
Sbjct: 66 RLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILL 125
Query: 283 HRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAF 342
L LLR +L VS + L +E G ++
Sbjct: 126 LPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVI 177
Query: 343 PIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEE 402
P GID+++F I L E G+ V+L V RLD KG+ I A K +
Sbjct: 178 PNGIDTEKFAP--------ARIGLLPEG--GKFVVLYVGRLDPEKGLDLLIEAAAKLKKR 227
Query: 403 NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFH 462
P + + I E +KL + + + +
Sbjct: 228 GPDIK-----LVIVGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDE 268
Query: 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAIL 519
L L A DV ++ SL +G LV E +A G +++ G + G +L
Sbjct: 269 ELAELLASADVFVLPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLL 323
Query: 520 VNPWNITEVASSIGYALNMPADERE 544
V P ++ E+A ++ L P E
Sbjct: 324 VPPGDVEELADALEQLLEDPELREE 348
|
Length = 381 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 68/306 (22%), Positives = 111/306 (36%), Gaps = 58/306 (18%)
Query: 244 DVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVG 303
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 304 FHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDH 363
D + A + E G ++T + P G+D++RF A + +
Sbjct: 142 LRRADR----IIAVSEATREELRELGGVPPEKITVI---PNGVDTERFRPAPRAARRRLG 194
Query: 364 INELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDV 423
I E V+L V RL KG+ + A K +E P R +V++ D
Sbjct: 195 IPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVR--LVIV-------GDG 239
Query: 424 PEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFH------ALCALYAITDVALVT 477
P ++L + E L + F L ALYA DV ++
Sbjct: 240 PLREELEALAAE-----------------LGLGDRVTFLGFVPDEDLPALYAAADVFVLP 282
Query: 478 SLRDGMNLVSYEFVACQASKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVASSIGY 534
SL +G LV E +A G+ ++ S+ G + + G +LV P + +A +I
Sbjct: 283 SLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILR 337
Query: 535 ALNMPA 540
L+ P
Sbjct: 338 LLDDPE 343
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 942 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.94 | |
| PLN02316 | 1036 | synthase/transferase | 99.94 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.94 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.93 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.93 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.93 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.93 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.93 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.92 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.92 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.92 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.91 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.91 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.91 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.91 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.91 | |
| PLN00142 | 815 | sucrose synthase | 99.9 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.89 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.89 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.89 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.89 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.88 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.88 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.88 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.88 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.88 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.87 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.87 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.87 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.87 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.87 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.86 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.85 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.85 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.85 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.85 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.85 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.85 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.85 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.85 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.85 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.84 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.84 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.84 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.84 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.84 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.83 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.83 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.83 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.83 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.83 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.82 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.82 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.82 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.82 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.82 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.82 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.82 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.81 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.81 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.8 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.8 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.79 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.79 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.78 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.78 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.77 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.77 | |
| PLN02887 | 580 | hydrolase family protein | 99.76 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.76 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.76 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.76 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.75 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.74 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.73 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.73 | |
| PLN02423 | 245 | phosphomannomutase | 99.73 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.73 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.72 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.72 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.72 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.68 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.68 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.67 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.66 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.64 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.64 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.6 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.55 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.54 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.52 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.49 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.39 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.34 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.34 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.31 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.31 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.28 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.27 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.24 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.22 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.2 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.18 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.14 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.13 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.09 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.0 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.98 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.97 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.97 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.95 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.46 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.41 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.4 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.36 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.32 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.24 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.17 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.06 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.04 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.94 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.84 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 97.63 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.61 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.42 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.42 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 97.22 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.17 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.02 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.84 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 96.67 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.42 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.37 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.22 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.16 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.11 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.06 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 96.02 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 95.92 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 95.86 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 95.85 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.83 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.72 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 95.71 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.65 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 95.57 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.53 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.48 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.46 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.3 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.27 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.22 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.12 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 95.01 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.63 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 94.42 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.26 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.17 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 94.11 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 93.98 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 93.93 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.83 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 93.78 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.75 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.48 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.24 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 93.15 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 93.01 | |
| PLN02954 | 224 | phosphoserine phosphatase | 92.98 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.97 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 92.82 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 92.45 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.44 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 92.24 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 92.2 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.02 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 91.99 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 91.8 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.64 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.54 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 91.46 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 91.31 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.15 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 90.91 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 90.59 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 90.39 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 90.32 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 90.26 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 89.97 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.52 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 89.25 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 89.24 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 89.07 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 88.21 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 88.21 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 88.19 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 87.87 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 87.29 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 87.08 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.74 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 86.46 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 86.37 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 86.27 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 86.13 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 84.82 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 84.71 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 84.3 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 84.25 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 84.1 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 83.83 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 83.13 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 83.08 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 82.59 | |
| PRK08238 | 479 | hypothetical protein; Validated | 81.8 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 81.68 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 81.15 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 80.02 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-184 Score=1664.24 Aligned_cols=911 Identities=80% Similarity=1.241 Sum_probs=830.8
Q ss_pred CCCCCcCCCCC-CCchHHHHHHHHHHHhhh-cccccCCC-----CCCcccccccccccCCCCCCcchhhccCCC----CC
Q 002285 25 MPGNKYNSSPL-TPRTRLERLLRERELRKN-RSFLQNEG-----EPDFFASESFLNASESWGPIDEEEFAGTRS----ST 93 (942)
Q Consensus 25 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 93 (942)
||||+|+|++. .+++|||||+||||+|+. +++..... ..+.++++....+.++.+.+.+++++++.+ .+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRERELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAESALP 80 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHHHHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhccCC
Confidence 89999999985 557799999999999998 55442222 448899999999999999999999999874 55
Q ss_pred CCCcccCCCC--CCeEEEEECCCccceeecCCCcEEEEecCCchHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhc
Q 002285 94 DNGERLEGRC--KQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALA 171 (942)
Q Consensus 94 ~~~~~~~~~~--~~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~~l~ 171 (942)
+++++++++. ++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++..+.
T Consensus 81 ~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~~l~ 160 (934)
T PLN03064 81 DGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALA 160 (934)
T ss_pred cccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHHHhc
Confidence 8999999874 79999999999999988778999999999999999999966799999999988776555666777788
Q ss_pred CccEEEeecChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCC
Q 002285 172 EKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDY 251 (942)
Q Consensus 172 ~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDy 251 (942)
+|+|+||||+++++++||+||||++|||+|||++.++.++.+..+.++.+|++|++||++||++|++.++++|+||||||
T Consensus 161 ~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWVHDY 240 (934)
T PLN03064 161 EKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDY 240 (934)
T ss_pred cCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 99999999999999999999999999999999865443333333334456999999999999999999999999999999
Q ss_pred chhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee
Q 002285 252 HLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE 331 (942)
Q Consensus 252 hL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~ 331 (942)
|||+||.+||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++....++.
T Consensus 241 HL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~ 320 (934)
T PLN03064 241 HLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE 320 (934)
T ss_pred hhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred cCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEE
Q 002285 332 DQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVV 411 (942)
Q Consensus 332 ~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vv 411 (942)
++||.++|.++|+|||++.|...+..+++++++++++++++++++|++|||||+.|||.++|+||++||++||+|+++++
T Consensus 321 ~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVV 400 (934)
T PLN03064 321 DQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVV 400 (934)
T ss_pred ECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHH
Q 002285 412 LIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFV 491 (942)
Q Consensus 412 Lvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEam 491 (942)
||||++|+|+++++|++|++++.++|++||++||+.+|.||+|+...++++++.+||++|||||+||++||||||++|||
T Consensus 401 LvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyv 480 (934)
T PLN03064 401 LLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFV 480 (934)
T ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 492 ACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 492 A~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
|||.+++|+||+|||+|++++|+.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 481 a~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 481 ACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELN 560 (934)
T ss_pred HhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999997789999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhhccccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCC
Q 002285 572 DTIVEAQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT 651 (942)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~ 651 (942)
.+..+...+..+..+.|+.+.++++|++++++||||||||||++++++|.++.+++.++.+.++++++++|++|+++++|
T Consensus 561 ~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n 640 (934)
T PLN03064 561 DTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKT 640 (934)
T ss_pred HHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCC
Confidence 98776666666667899999999999999999999999999999999996556666666788999999999999999999
Q ss_pred eEEEEcCCChhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEE
Q 002285 652 TVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVW 731 (942)
Q Consensus 652 ~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~ 731 (942)
+|+|+|||++++|++||+.+++++||+||++++.+++.|...+++..+..|++.+..+|++|++++||++||+|+++++|
T Consensus 641 ~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLaw 720 (934)
T PLN03064 641 TIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVW 720 (934)
T ss_pred eEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEE
Confidence 99999999999999999999999999999999987889985443455678999999999999999999999999999999
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
|||++||+++..|+++++++|+...+.+.+++|+.|+++|||+|.|+|||.|+++||+++...+.+..++|||+|+|| |
T Consensus 721 HYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD-d 799 (934)
T PLN03064 721 NYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH-F 799 (934)
T ss_pred EecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC-C
Confidence 999999999999999999998555555668999999999999999999999999999987533322246899999999 8
Q ss_pred CC-CHHHHHhcCcCCCCC--CCCCCC---CcccccccccccccCCccCCCCccc-ccccccchhhhhhcccccC-CCccc
Q 002285 812 QK-DEDIYTFFEPELPFE--SPAGPR---ANAADHLRRSSISQIPQAKSGPKVR-FRKQRSLSSIERKVSNYLT-GGIWR 883 (942)
Q Consensus 812 ~n-DEdMF~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 883 (942)
.+ |||||+++...+|.+ +.++++ +.+.|.+|+|+ ++.|+.+++++.+ .++|++.++++++..+|.+ .|+.+
T Consensus 800 ~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (934)
T PLN03064 800 LGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPS-GKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDR 878 (934)
T ss_pred CCCcHHHHHHHhccCCcccccccccccCCcccCCcccccc-CCCccccccccccccccCCcccccccccccccccCCccc
Confidence 75 999999999988865 444444 66778888886 7778888888866 9999999999999888866 56777
Q ss_pred ccccccccccCCCcccccCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhhhCcCC
Q 002285 884 PAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAECPQS 941 (942)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~~~~~ 941 (942)
+.+++.++ .+++|++++|||||+||+|+|+|+|+|++++||+.||++|+++..+
T Consensus 879 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 879 RPSPEKIG----WSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cCCccccc----cccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 76666655 4999999999999999999999999999999999999999988754
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-156 Score=1424.35 Aligned_cols=746 Identities=37% Similarity=0.679 Sum_probs=668.6
Q ss_pred CCCeEEEEECCCccceeecCC--CcEEEEecCCchHHhhccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEE
Q 002285 103 CKQRLLVVANRLPVSAVRRGE--DSWQLEISVGGLVSALLGV-R--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 177 (942)
Q Consensus 103 ~~~rlivvsnrlP~~~~~~~~--~~~~~~~~~ggL~~~l~~~-~--~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~p 177 (942)
+++||||||||||+.++++++ ++|++++++|||+++|.++ . ..+++||||+|..++.+++......++.+|+|+|
T Consensus 58 ~~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~p 137 (854)
T PLN02205 58 PKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVP 137 (854)
T ss_pred CCCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEE
Confidence 468999999999999988643 6899999999999999976 3 3789999999987776444433355667899999
Q ss_pred eecChHHHHHHhhhhhhhcccccccCCC-CCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCC-CCEEEEcCCchh
Q 002285 178 VFLDEETVHQYYNGYCNNMLWPLFHYLG-LPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEE-GDVVWCHDYHLM 254 (942)
Q Consensus 178 V~l~~~~~~~~Y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~-~DiIwvHDyhL~ 254 (942)
|||+++++++||+||||++|||+|||+. ..+. ....|++ .|++|++||+.||++|++.+++ +|+|||||||||
T Consensus 138 v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~ 213 (854)
T PLN02205 138 TFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLM 213 (854)
T ss_pred eeCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhh
Confidence 9999999999999999999999999994 3221 1124765 4999999999999999999998 699999999999
Q ss_pred hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC----Cce
Q 002285 255 FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGV 330 (942)
Q Consensus 255 llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~----~~i 330 (942)
++|.+||+++|+++||||||+|||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .++
T Consensus 214 llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~ 293 (854)
T PLN02205 214 VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGL 293 (854)
T ss_pred HHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998764 357
Q ss_pred ecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc--CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCC
Q 002285 331 EDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA--GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRD 408 (942)
Q Consensus 331 ~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~ 408 (942)
.|+||.++|.++|+|||++.|......+++++++++++++++ ++++|++|||||+.|||.++|+||++||++||+|++
T Consensus 294 ~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~g 373 (854)
T PLN02205 294 EYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQG 373 (854)
T ss_pred EECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccC
Confidence 899999999999999999999999888999999999999995 689999999999999999999999999999999999
Q ss_pred cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHH
Q 002285 409 KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSY 488 (942)
Q Consensus 409 ~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~l 488 (942)
|++||||++|+|+++++|++++.+++++|++||++||+.+|.||+|+++.++++++.+||++|||+|+||+|||||||++
T Consensus 374 kvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~ 453 (854)
T PLN02205 374 KVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPY 453 (854)
T ss_pred CEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccC---------------CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 489 EFVACQAS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 489 EamA~~~~---------------~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
||+|||.+ ++|+||+|||+||+++| .++++|||||++++|+||.+||+|+++||+.|+++++++
T Consensus 454 Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~ 532 (854)
T PLN02205 454 EYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRY 532 (854)
T ss_pred heeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999963 57999999999999999 789999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHhHHHhh-hcc---------c-----cCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCC
Q 002285 554 VTTHTSQEWAATFVSELNDTIVEAQ-IRT---------R-----QVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVD 618 (942)
Q Consensus 554 v~~~~~~~W~~~fl~~L~~~~~~~~-~~~---------~-----~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~ 618 (942)
|.+||+.+|+++||.+|..+++.+. .+. + ..+++|+++.++++|+++++|+|||||||||++...
T Consensus 533 v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~ 612 (854)
T PLN02205 533 VSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS 612 (854)
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc
Confidence 9999999999999999999876531 111 1 115789999999999999999999999999998742
Q ss_pred ccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc-CceEEeecceEEEeCCC-ceeecccC
Q 002285 619 FLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY-NMWLAAENGMFLRLTTG-EWMTTMPE 696 (942)
Q Consensus 619 ~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~l~liaehG~~ir~~~~-~w~~~~~~ 696 (942)
....++++++++|++|++++++.|+|+|||++..|+++|+.+ ++++||+||++++..++ .|.... .
T Consensus 613 -----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~ 680 (854)
T PLN02205 613 -----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-P 680 (854)
T ss_pred -----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-h
Confidence 245788999999999999999999999999999999999997 69999999999996554 787544 2
Q ss_pred CCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEEC
Q 002285 697 NLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAV 776 (942)
Q Consensus 697 ~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~ 776 (942)
..+..|++.+..+++.|++++||++||.|+++++||||.+||+++..|++++..++ ...+.+.++.+..|++++||+|+
T Consensus 681 ~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~ 759 (854)
T PLN02205 681 VADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQ 759 (854)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeC
Confidence 24568999999999999999999999999999999999999999988899999888 65556667889999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCC
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGP 856 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (942)
|+|||.|+++|++.+...+ +++|+++|||| |.|||+||++++....
T Consensus 760 gvnKG~Al~~Ll~~~~~~g---~~~d~vl~~GD-D~nDedMF~~~~~~~~------------------------------ 805 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERG---MLPDFVLCIGD-DRSDEDMFEVITSSMA------------------------------ 805 (854)
T ss_pred CCCHHHHHHHHHHHHHhcC---CCcccEEEEcC-CccHHHHHHHhhhhcc------------------------------
Confidence 9999999999987653222 56799999999 9999999999964200
Q ss_pred cccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhh
Q 002285 857 KVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~ 936 (942)
|.+ + ....++|||+||.++|+|+|||+|++||.+||+.|+
T Consensus 806 -----------------------g~~----------------~-~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~ 845 (854)
T PLN02205 806 -----------------------GPS----------------I-APRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLA 845 (854)
T ss_pred -----------------------CCc----------------c-cccccceeEEECCCCccCeEecCCHHHHHHHHHHHH
Confidence 000 0 011257999999999999999999999999999999
Q ss_pred hCcC
Q 002285 937 ECPQ 940 (942)
Q Consensus 937 ~~~~ 940 (942)
+.+.
T Consensus 846 ~~~~ 849 (854)
T PLN02205 846 SVSE 849 (854)
T ss_pred hcch
Confidence 8664
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-155 Score=1418.95 Aligned_cols=782 Identities=71% Similarity=1.182 Sum_probs=687.4
Q ss_pred CCC-CCCeEEEEECCCccceeecCCCcEEEEecCCchHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEe
Q 002285 100 EGR-CKQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 178 (942)
Q Consensus 100 ~~~-~~~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV 178 (942)
+.| .++||||||||||+.+.++++|.|++++++|||+++|.+++..+++||||+|..+++++++..+...+.+++|+||
T Consensus 5 ~~~~~~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv 84 (797)
T PLN03063 5 DARGERPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPV 84 (797)
T ss_pred cCccCCCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEe
Confidence 445 5799999999999998877779999999999999999999556999999999876655455566777789999999
Q ss_pred ecChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHH
Q 002285 179 FLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQ 258 (942)
Q Consensus 179 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~ 258 (942)
|| ++++++||+||||++|||+|||++.++.+..+....++..|++|++||+.||++|++.++++|+|||||||||++|+
T Consensus 85 ~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~ 163 (797)
T PLN03063 85 FL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQ 163 (797)
T ss_pred eh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHH
Confidence 99 99999999999999999999998433212111223345569999999999999999999999999999999999999
Q ss_pred HHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeE
Q 002285 259 CLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTR 338 (942)
Q Consensus 259 ~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~ 338 (942)
+||++.|+++||||+|||||++|+||+||+|++|++|||+||+|||||++|++||+++|+++++++....++.++|+.++
T Consensus 164 ~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~ 243 (797)
T PLN03063 164 YLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTR 243 (797)
T ss_pred HHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887778999999999
Q ss_pred EEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 339 VAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 339 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
|.++|+|||++.|.+....+++++....++++++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|
T Consensus 244 I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~p 323 (797)
T PLN03063 244 VAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVP 323 (797)
T ss_pred EEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecC
Confidence 99999999999998877667777777788888889999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+++++++|+++++++++++++||++|++.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+..++
T Consensus 324 sr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~ 403 (797)
T PLN03063 324 TRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKK 403 (797)
T ss_pred CCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHHhh
Q 002285 499 GVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQ 578 (942)
Q Consensus 499 G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~~ 578 (942)
|++|+||++|+++.+|.+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||.+|.+++.++.
T Consensus 404 gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~ 483 (797)
T PLN03063 404 GVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAE 483 (797)
T ss_pred CCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999977999999999999999999999999999999999999999999999999999999999887665
Q ss_pred hccccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC
Q 002285 579 IRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG 658 (942)
Q Consensus 579 ~~~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG 658 (942)
......++.|+...++++|+++++++|||||||||+++.++|. ..+.+.++++++++|++|+++++|.|+|+||
T Consensus 484 ~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSG 557 (797)
T PLN03063 484 LRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLSR 557 (797)
T ss_pred hcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5555567899999999999999999999999999999866431 0146789999999999999999999999999
Q ss_pred CChhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccch
Q 002285 659 SDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADL 738 (942)
Q Consensus 659 R~~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~ 738 (942)
|++++|++||+..+++++|+||++++..++.|....++..+..|++.+..+|++|++++||++||+|+++++||||++||
T Consensus 558 R~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp 637 (797)
T PLN03063 558 SGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADV 637 (797)
T ss_pred CCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCCh
Confidence 99999999999989999999999999777889865434456789999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHH
Q 002285 739 EFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDI 817 (942)
Q Consensus 739 e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdM 817 (942)
+++..|+++++++|.+..+.+.+++++.||++|||+|.|+|||.|+++||+++...+....++|||+|+|| |. +||+|
T Consensus 638 ~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdm 716 (797)
T PLN03063 638 EFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDV 716 (797)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHH
Confidence 99988999999988444445567999999999999999999999999999987322211135799999999 75 69999
Q ss_pred HHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCc
Q 002285 818 YTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSS 897 (942)
Q Consensus 818 F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (942)
|+++.....+. ..| .++..+. . +++ .+..
T Consensus 717 F~~l~~~~~~~--------~~~---------~~~~~~~----~---------~~~---------------------~~~~ 745 (797)
T PLN03063 717 YTFFEPEILSK--------KKS---------SSSNYSD----S---------DKK---------------------VSSN 745 (797)
T ss_pred HHhcccccccc--------ccc---------ccccccc----c---------ccc---------------------cccc
Confidence 99996521000 000 0000000 0 000 0011
Q ss_pred ccccCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhhhCcC
Q 002285 898 VLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAECPQ 940 (942)
Q Consensus 898 ~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~~~~ 940 (942)
.+..+.++.|+|+||.++|.|+|||+|++||+++|+.|++...
T Consensus 746 ~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~ 788 (797)
T PLN03063 746 LVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANT 788 (797)
T ss_pred ccccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhccCc
Confidence 2233445789999999999999999999999999999987654
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-140 Score=1288.15 Aligned_cols=721 Identities=43% Similarity=0.757 Sum_probs=662.8
Q ss_pred CeEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCccEEEeecC
Q 002285 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 181 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~--~~~~~~~~~l~~~~~~pV~l~ 181 (942)
+||||||||+|+.+.+++ |.|++++++|||+++|.++ +..+++||||+|...+.. .++..+...+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 489999999999987654 5799999999999999998 778999999999766542 222334566789999999999
Q ss_pred hHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHH
Q 002285 182 EETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCL 260 (942)
Q Consensus 182 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~L 260 (942)
++++++||+||||++|||+|||++... .|++ +|++|++||+.||++|++.++++|+||||||||+++|.+|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999995433 3665 4999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEE
Q 002285 261 KEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVA 340 (942)
Q Consensus 261 r~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~ 340 (942)
|++.|+++||||+|+|||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.....+.+.|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||++.|.+....+.+.+..+.+|+.++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|++
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999988777777777888888888999999999999999999999999999999999999999999999998
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCce
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGV 500 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~ 500 (942)
.+.++|+++++++++++++||++|++.+|.||+|+.+.++++++.++|++|||||+||++||||||++|||||+.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 77799999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHHhhhc
Q 002285 501 LILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQIR 580 (942)
Q Consensus 501 lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~~~~ 580 (942)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+.+|++.|++++++++.+||+.+|+++|+..|.+++..+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987664433
Q ss_pred cccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 581 TRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 581 ~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
....++.|+.+.+.++|+++++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 3334578899999999999999999999999999987666 4667899999999999998999999999999
Q ss_pred hhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHH
Q 002285 661 RNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEF 740 (942)
Q Consensus 661 ~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~ 740 (942)
+..|+++|+.+++++||+||++++..++.|.... ..+..|++.+.++++.+.+++||+++|.|+.+++|||+++++++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999998899999999999997778887654 23678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHh
Q 002285 741 GRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTF 820 (942)
Q Consensus 741 ~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~ 820 (942)
+..+++++.+++ ...+.+..+.++.|+.++||+|+++|||.|++++++. .++++++|||| |.|||+||++
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~ 689 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRA 689 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHh
Confidence 988888888888 6656666788999999999999999999999999983 35799999999 9999999998
Q ss_pred cCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccc
Q 002285 821 FEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLD 900 (942)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (942)
+..
T Consensus 690 ~~~----------------------------------------------------------------------------- 692 (726)
T PRK14501 690 LPE----------------------------------------------------------------------------- 692 (726)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 742
Q ss_pred cCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhhh
Q 002285 901 LRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAE 937 (942)
Q Consensus 901 ~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~ 937 (942)
.+++|+||.++|.|+|+|+++++|..+|+.|++
T Consensus 693 ----~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 ----TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred ----CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 269999999999999999999999999999975
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-118 Score=1063.04 Aligned_cols=722 Identities=48% Similarity=0.814 Sum_probs=666.7
Q ss_pred CCeEEEEECCCccce-eecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecC
Q 002285 104 KQRLLVVANRLPVSA-VRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 181 (942)
Q Consensus 104 ~~rlivvsnrlP~~~-~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~ 181 (942)
..|+|+|||+||+.+ .+..++.|.++++.|||++++.+. ...+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 579999999999998 455688999999999999999987 777899999999888887777777778889999999999
Q ss_pred hHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHH
Q 002285 182 EETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCL 260 (942)
Q Consensus 182 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~L 260 (942)
++...++|++|||++|||+|||...+..... . .|+. .|.+|.++|+.|+++|++.++++|+|||||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~--~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPAF--K-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchhh--h-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 9999999999999999999999933332211 1 3443 5999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccC----CCceecCCee
Q 002285 261 KEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGT----PEGVEDQGRL 336 (942)
Q Consensus 261 r~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~----~~~i~~~gr~ 336 (942)
|++..+++||||+|.|||++|+|+++|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4468999999
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
+.|.++|+|||+.+|......+.+..+..+++..++++++|++|||+|+.||+.+++.||++++++||+|+++++|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
.|+++++++|++++.++...+.+||.+|++..+.||+++...++..++.++|.+||+++++|++|||||+++||++||.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 497 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+.+++|+|+|+|+.+.++.+++++||||.++++.+|..+|+|+.+++..|+...+.++..++...|+..|+..|.+.++.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999888999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhhccccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEE
Q 002285 577 AQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVL 656 (942)
Q Consensus 577 ~~~~~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~Iv 656 (942)
.. ...++.+.|..+.++..|+++++|+|+||||||+++. +| ..+...|+.|++||+|.|+|+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~--~~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPP--RS---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCC--CC---------------chHHHHHHHHhcCCCCeEEEE
Confidence 66 4344557799999999999999999999999888765 22 119999999999999999999
Q ss_pred cCCChhhHHHhhccc-CceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEec
Q 002285 657 SGSDRNVLDDNFGEY-NMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKY 735 (942)
Q Consensus 657 SGR~~~~L~~~~~~~-~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ 735 (942)
|||++..++.|+... ++|++||||+++|.+++ |.+.+ .+++|++.+++++++|++||||+++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998777 89999999999998766 98876 67899999999999999999999999999999999999
Q ss_pred cchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCH
Q 002285 736 ADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDE 815 (942)
Q Consensus 736 ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDE 815 (942)
|||+++..||+|+.++| .. .+.++.++.|+..|||+|.|++||.|+.+++..+. .++|+++|+|| |.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67789999999999999999999999999999986 46899999999 99999
Q ss_pred HHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCC
Q 002285 816 DIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEG 895 (942)
Q Consensus 816 dMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (942)
+||+++...... +
T Consensus 687 d~~~~~~~~~~~------------------------------------------------------------~------- 699 (732)
T KOG1050|consen 687 DMFEFISKAKDP------------------------------------------------------------E------- 699 (732)
T ss_pred HHHHHHhhccCC------------------------------------------------------------c-------
Confidence 999999763110 0
Q ss_pred CcccccCCCceEEEEeCCCCCccceecCCHHHHHHHHH
Q 002285 896 SSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLN 933 (942)
Q Consensus 896 ~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~ 933 (942)
++ ++.|+|+||.++|.|.|++.++.||..+|+
T Consensus 700 -~~-----~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 -KV-----EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred -cc-----ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 00 368999999999999999999999999885
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-111 Score=962.73 Aligned_cols=451 Identities=35% Similarity=0.644 Sum_probs=416.5
Q ss_pred CeEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhh-cCccEEEeecCh
Q 002285 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDE 182 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l-~~~~~~pV~l~~ 182 (942)
+||||||||+|+... . ..++|||++||.++ +..+|+||||+|....++ ..+.... .++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~~-----~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~---~~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-----H---KASAGGLAVGILGALKAAGGLWFGWSGETGNED---QPLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCCC-----C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc---ccchhhhcCCceEEEecCCH
Confidence 589999999997321 1 45689999999998 778999999999653321 1123332 468999999999
Q ss_pred HHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHH
Q 002285 183 ETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLK 261 (942)
Q Consensus 183 ~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr 261 (942)
+++++||+||||++|||+|||+.... .|+. .|++|++||+.||++|++.++++|+||||||||+++|++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999995432 3554 49999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC-CceecCCeeeEEE
Q 002285 262 EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP-EGVEDQGRLTRVA 340 (942)
Q Consensus 262 ~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~ 340 (942)
+++|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||++||+++++++... ..+.++||.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987644 3567889999999
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||++.|...+..+ +.++.++++++++++++|++||||||+|||.++|+||++||++||+|+++++|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999877655 4667888999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhcc-CCCc
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA-SKKG 499 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~-~~~G 499 (942)
+++++|++++++|+++|++||++||+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7889
Q ss_pred eEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 500 VLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 500 ~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+...
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 78999999999999999999999999999999999999999999999999999999987533
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-110 Score=961.42 Aligned_cols=454 Identities=31% Similarity=0.602 Sum_probs=420.5
Q ss_pred EECCCccceeecCCCc--EEEEecCCchHHhhccc-c-cCCcEEEEeCCCCCCCchh-hHHHH-HhhcCccEEEeecChH
Q 002285 110 VANRLPVSAVRRGEDS--WQLEISVGGLVSALLGV-R-EFEARWIGWAGVNVPDEIG-QKALT-KALAEKRCIPVFLDEE 183 (942)
Q Consensus 110 vsnrlP~~~~~~~~~~--~~~~~~~ggL~~~l~~~-~-~~~~~WvGw~g~~~~~~~~-~~~~~-~~l~~~~~~pV~l~~~ 183 (942)
||||||+.++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++ ...+. ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 4679999999975322111 11111 2235689999999999
Q ss_pred HHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHh
Q 002285 184 TVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE 262 (942)
Q Consensus 184 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~ 262 (942)
++++||+||||++|||+|||++... .|++ .|++|++||++||++|++.++++|+||||||||+++|.+||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999985433 3665 499999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCC--------------
Q 002285 263 YNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE-------------- 328 (942)
Q Consensus 263 ~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~-------------- 328 (942)
++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHH
Q 002285 329 -------GVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLE 401 (942)
Q Consensus 329 -------~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~ 401 (942)
++.++||.++|.++|+|||++.|.+....+++.++.+++|++++++++|++|||||+.|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999998888888888899999999999999999999999999999999999999
Q ss_pred hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCC
Q 002285 402 ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRD 481 (942)
Q Consensus 402 ~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~E 481 (942)
+||+|+++++||||+.|+|+++++|++++++++++|++||++|++.+|.||+|+.+.++++++.+||++|||+++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHH
Q 002285 482 GMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQE 561 (942)
Q Consensus 482 G~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 561 (942)
|||||++||||||.+++|+||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999999889999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002285 562 WAATFVSELND 572 (942)
Q Consensus 562 W~~~fl~~L~~ 572 (942)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998875
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-110 Score=964.27 Aligned_cols=464 Identities=54% Similarity=0.943 Sum_probs=354.7
Q ss_pred CeEEEEECCCccceeecC-CCc--EEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCccEEEe
Q 002285 105 QRLLVVANRLPVSAVRRG-EDS--WQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPV 178 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~-~~~--~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~--~~~~~~~~l~~~~~~pV 178 (942)
.|+||||||||+.+++++ +|+ |+++.++|||+++|.++ +..+++||||+|...++++ ++........+++|+||
T Consensus 1 ~~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 1 ARLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CCcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 379999999999998876 666 88888899999999999 7789999999998776544 22222345678999999
Q ss_pred ecChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHH
Q 002285 179 FLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLP 257 (942)
Q Consensus 179 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp 257 (942)
||+++++++||+||||++|||+|||....... ...|+. .|++|++||+.||++|++.+++||+|||||||||++|
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~----~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD----LARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG--------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc----cchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 99999999999999999999999998421101 123555 4999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCC--ceecCCe
Q 002285 258 QCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE--GVEDQGR 335 (942)
Q Consensus 258 ~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~--~i~~~gr 335 (942)
++||+++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||+++++++.... ++.++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887654 7999999
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcC-CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
.++|.++|+|||++.|.+.+.++++.++.+++++++++ +++|++|||+|++||+.++|+||++||++||+|+++++|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988888999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
|+.|+++++++|++++++++++|++||++||+.+|.||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 495 ASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
.+++|+||+|||+|++++|+.++++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+|+++||.+|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999955779999999999999999999999999999999999999999999999999999873
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-105 Score=909.47 Aligned_cols=461 Identities=49% Similarity=0.862 Sum_probs=428.4
Q ss_pred CCCeEEEEECCCccceee-cCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeec
Q 002285 103 CKQRLLVVANRLPVSAVR-RGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFL 180 (942)
Q Consensus 103 ~~~rlivvsnrlP~~~~~-~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l 180 (942)
..+|+||||||+|+...+ .+++......++|||+++|.++ +..+++||||+|...+.++..........++...||++
T Consensus 13 ~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v~l 92 (486)
T COG0380 13 EDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVIL 92 (486)
T ss_pred cCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEEec
Confidence 468999999999999763 3456788899999999999998 77899999999988763232344555556899999999
Q ss_pred ChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHH
Q 002285 181 DEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQC 259 (942)
Q Consensus 181 ~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~ 259 (942)
+.+++++||++|||++|||+|||+.... .|++ .|+.|++||++||++|++.+++||+||||||||+++|+|
T Consensus 93 ~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P~m 164 (486)
T COG0380 93 SDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQM 164 (486)
T ss_pred CHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhHHH
Confidence 9999999999999999999999995332 3555 499999999999999999999999999999999999999
Q ss_pred HHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee---cCCee
Q 002285 260 LKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE---DQGRL 336 (942)
Q Consensus 260 Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~---~~gr~ 336 (942)
||++.|+++||||+|+|||++|+|+|||+|++|++||++||+|||||++|++||+.+|+++++... ..++. +.|+.
T Consensus 165 lR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~-~~~~~~~~~~~~~ 243 (486)
T COG0380 165 LRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG-DADIRFNGADGRI 243 (486)
T ss_pred HHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccc-cccccccccCCce
Confidence 999999999999999999999999999999999999999999999999999999999999998652 22333 34799
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcC-CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQI 415 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi 415 (942)
+++.++|+|||+..|.....++.++.+..++++.+.+ +++|++|||||+.||+.++++||++||++||+|++|++|+||
T Consensus 244 v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi 323 (486)
T COG0380 244 VKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQI 323 (486)
T ss_pred EEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEe
Confidence 9999999999999999998888888888899988876 999999999999999999999999999999999999999999
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhcc
Q 002285 416 AVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA 495 (942)
Q Consensus 416 ~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~ 495 (942)
+.|+|++.++|+.++.+++++|++||++||+.+|.||+|++..++++++.+||++|||+++||++||||||++||+|||.
T Consensus 324 ~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~ 403 (486)
T COG0380 324 APPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR 403 (486)
T ss_pred cCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 496 SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 496 ~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
+++|++|+|||+|++.+| .++++|||||.+++|++|.+||+|+++||++|++++++.|.+||+++|+++|+.+|...
T Consensus 404 ~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 404 DKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred CCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 889999999999999999 77999999999999999999999999999999999999999999999999999999863
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-102 Score=900.42 Aligned_cols=452 Identities=56% Similarity=0.935 Sum_probs=420.7
Q ss_pred eEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHH-HHhhcCccEEEeecChH
Q 002285 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDEE 183 (942)
Q Consensus 106 rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~-~~~l~~~~~~pV~l~~~ 183 (942)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999987654 2 567899999999998 778999999999866543322223 34456799999999999
Q ss_pred HHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHh
Q 002285 184 TVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE 262 (942)
Q Consensus 184 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~ 262 (942)
++++||+||||++|||+|||++... .|++ .|++|++||+.||++|++.++++|+||||||||+++|.+||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999995432 3655 499999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEe
Q 002285 263 YNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAF 342 (942)
Q Consensus 263 ~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~vi 342 (942)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+++|+++++++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999998888888899999999999
Q ss_pred eCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC
Q 002285 343 PIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD 422 (942)
Q Consensus 343 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd 422 (942)
|+|||++.|.+....+++.+....+|++++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEE
Q 002285 423 VPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLI 502 (942)
Q Consensus 423 ~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lI 502 (942)
+++|+++++++++++++||++|+..+|.||+|+.+.++++++.++|++|||||+||++||||||++|||||+..+.|+||
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876668899
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 503 LSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 503 lSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999999875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-93 Score=830.99 Aligned_cols=456 Identities=54% Similarity=0.924 Sum_probs=424.0
Q ss_pred eEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHH
Q 002285 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEET 184 (942)
Q Consensus 106 rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~~~~ 184 (942)
||||||||+|+.++++++|.|+++.++|||+++|.++ +..+++||||+|...+.+++.......+.+|+|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998888999999999999999998 777999999999877665444455666789999999999999
Q ss_pred HHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhh
Q 002285 185 VHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY 263 (942)
Q Consensus 185 ~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~ 263 (942)
++.||+||||++|||+|||++... .|++ .|++|+++|+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 3554 5999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC-CceecCCeeeEEEEe
Q 002285 264 NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP-EGVEDQGRLTRVAAF 342 (942)
Q Consensus 264 ~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~vi 342 (942)
.|+++||||+|||||++++|+++|++++|+++|++||+||||+++|+++|+++|+++++++... ..+.++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999988654 578899999999999
Q ss_pred eCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC
Q 002285 343 PIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD 422 (942)
Q Consensus 343 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd 422 (942)
|+|||++.|.+....++..++..+++..++++++|++||||++.||+..+|+||+++++++|+++++++|+||+.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999988766666656666667677889999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEE
Q 002285 423 VPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLI 502 (942)
Q Consensus 423 ~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lI 502 (942)
++++.++++++++++++||.+++..+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999877778899
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 503 LSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 503 lSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|++++|+.+++++++++.+||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999884 89999999999999999999999999999999999999999999999999999887
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=354.56 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=216.9
Q ss_pred CChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHh
Q 002285 588 LPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDN 667 (942)
Q Consensus 588 l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~ 667 (942)
+....+.+.|..+++++|||||||||++++.+| ..+.++++++++|++|+++++|.|+|+|||+..+++.+
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 445667889999999999999999999999999 68899999999999999999999999999999999999
Q ss_pred hcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHH
Q 002285 668 FGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 668 ~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
++..+++++|+||++++..++.|.....+..++.|++.+.++++++++++||++||.|+++++||||+++++....++..
T Consensus 75 ~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 75 FGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred cCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 99769999999999998655555333324567789999999999999999999999999999999999987766555444
Q ss_pred HHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCC
Q 002285 748 ILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPF 827 (942)
Q Consensus 748 l~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~ 827 (942)
..... . ....+++..||++||++|.++|||.|+++++++.+++ .++++|+|| |.|||+||++++..
T Consensus 155 ~~~~~-~---~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~------~~~~~~aGD-D~TDE~~F~~v~~~--- 220 (266)
T COG1877 155 EAATL-I---NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD------GRFPIFAGD-DLTDEDAFAAVNKL--- 220 (266)
T ss_pred HHHhc-c---ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC------CCcceecCC-CCccHHHHHhhccC---
Confidence 33322 1 1112899999999999999999999999999998743 268999999 99999999999752
Q ss_pred CCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceE
Q 002285 828 ESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYF 907 (942)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (942)
..+
T Consensus 221 -----------------------------------------------------------------------------~~~ 223 (266)
T COG1877 221 -----------------------------------------------------------------------------DSI 223 (266)
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 258
Q ss_pred EEEeCCCCCccceecCCHHHHHHHHHHhhhC
Q 002285 908 SCTVSRKRSNARYFLGSSGDVVTLLNELAEC 938 (942)
Q Consensus 908 t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~~ 938 (942)
+|+||.+.|+|.|++.++..+..+|..+.+.
T Consensus 224 ~v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~ 254 (266)
T COG1877 224 TVKVGVGSTQAKFRLAGVYGFLRSLYKLLEA 254 (266)
T ss_pred eEEecCCcccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999988654
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=366.48 Aligned_cols=242 Identities=17% Similarity=0.303 Sum_probs=196.5
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEE
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLA 676 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~li 676 (942)
..++++.+|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..|+++++..+++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~la 161 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYA 161 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEE
Confidence 356678999999999999999999 678999999999999996 469999999999999999997799999
Q ss_pred eecceEEEeCC--Cceee----cccCCCChhHHHHHHHHHHHH---HhcCCCeeeeeecceEEEEEeccchHHhHHHHHH
Q 002285 677 AENGMFLRLTT--GEWMT----TMPENLNMDWVDSVKHVFEYF---TERTPRSHFEVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 677 aehG~~ir~~~--~~w~~----~~~~~~~~~w~~~v~~il~~~---~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
|+||++++.++ ..|+. .. ......|.+.+.++++.+ +.++||++||+|+++++||||+++++.. .+
T Consensus 162 GsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 162 GSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 99999998432 24531 11 123456777777666554 5789999999999999999999976522 23
Q ss_pred HHHHHhcCCCCCC-CeEEEEcCcEEEEEEC-CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCC
Q 002285 748 ILQHLWSGPISNA-SVDVVQGGRSVEVRAV-GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPEL 825 (942)
Q Consensus 748 l~~~L~~~~~~~~-~v~v~~G~~~vEV~p~-gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~ 825 (942)
+..++ ..++.+. .+.++.|++++||+|. ++|||.||+.||+.+++.+ ...++++|||| |.|||+||++++..
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDaF~~L~~~- 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDAFKILRDK- 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHHHHHHhhc-
Confidence 33334 3333333 4899999999999995 9999999999999988754 23478999999 99999999999642
Q ss_pred CCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCc
Q 002285 826 PFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGEN 905 (942)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (942)
..
T Consensus 311 ------------------------------------------------------------------------------~~ 312 (354)
T PLN02151 311 ------------------------------------------------------------------------------KQ 312 (354)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 02
Q ss_pred eEEEEeC--CCCCccceecCCHHHHHHHHHHhhhC
Q 002285 906 YFSCTVS--RKRSNARYFLGSSGDVVTLLNELAEC 938 (942)
Q Consensus 906 ~~t~~VG--~~~s~A~y~l~~~~~V~~~L~~L~~~ 938 (942)
+++|+|| .++|.|+|+|+||+||..||+.|++-
T Consensus 313 G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~ 347 (354)
T PLN02151 313 GLGILVSKYAKETNASYSLQEPDEVMEFLERLVEW 347 (354)
T ss_pred CccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHh
Confidence 5777777 68999999999999999999999864
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=360.72 Aligned_cols=246 Identities=18% Similarity=0.277 Sum_probs=197.9
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.++.+.++.+|||||||||+|++++| +.+.++++++++|++|++ ++.|+|+|||++..+.++++..++
T Consensus 103 ~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l~~l 171 (366)
T PLN03017 103 IMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKLAEL 171 (366)
T ss_pred HHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcccCc
Confidence 444556788999999999999999888 566899999999999994 689999999999999999776678
Q ss_pred eEEeecceEEEeCCCceee-------cccCCCChhHHHHHHHH---HHHHHhcCCCeeeeeecceEEEEEeccchHHhHH
Q 002285 674 WLAAENGMFLRLTTGEWMT-------TMPENLNMDWVDSVKHV---FEYFTERTPRSHFEVRETSLVWNYKYADLEFGRL 743 (942)
Q Consensus 674 ~liaehG~~ir~~~~~w~~-------~~~~~~~~~w~~~v~~i---l~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~ 743 (942)
++||+||++++.+++.|.. .. ......|++.+.++ ++.+++++||++||+|+++++||||+++++..
T Consensus 172 ~l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~-- 248 (366)
T PLN03017 172 YYAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKW-- 248 (366)
T ss_pred eEEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHH--
Confidence 9999999999854444321 00 01223466555555 66778899999999999999999999976542
Q ss_pred HHHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 744 QARDILQHLWSGPISNA-SVDVVQGGRSVEVRA-VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 744 qa~el~~~L~~~~~~~~-~v~v~~G~~~vEV~p-~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
.++..++ ..++.++ .++++.|++++||+| .++|||.|++.||+.+++.+ ...++++|||| |.|||+||+++
T Consensus 249 --~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDEDaF~~L 321 (366)
T PLN03017 249 --SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDEDAFKML 321 (366)
T ss_pred --HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHHHHHHH
Confidence 2333333 3333333 489999999999999 49999999999999998754 23578999999 99999999999
Q ss_pred CcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCccccc
Q 002285 822 EPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDL 901 (942)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (942)
+..
T Consensus 322 ~~~----------------------------------------------------------------------------- 324 (366)
T PLN03017 322 RDR----------------------------------------------------------------------------- 324 (366)
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 642
Q ss_pred CCCceEEEEeC--CCCCccceecCCHHHHHHHHHHhhhCc
Q 002285 902 RGENYFSCTVS--RKRSNARYFLGSSGDVVTLLNELAECP 939 (942)
Q Consensus 902 ~~~~~~t~~VG--~~~s~A~y~l~~~~~V~~~L~~L~~~~ 939 (942)
..+|+|+|| +++|.|+|+|+||+||..||+.|++-.
T Consensus 325 --~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 325 --GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred --CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 137999999 589999999999999999999998643
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=363.09 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=198.2
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.+|.++++++|||||||||++++++| +.+.++++++++|++|+++ ..|+|||||++.+|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 347889999999999999999999999 7899999999999999985 57999999999999999998899
Q ss_pred eEEeecceEEEeCCC-----ceeeccc-----------CCCChhHHHHHHHHHH---HHHhcCCCeeeeeecceEEEEEe
Q 002285 674 WLAAENGMFLRLTTG-----EWMTTMP-----------ENLNMDWVDSVKHVFE---YFTERTPRSHFEVRETSLVWNYK 734 (942)
Q Consensus 674 ~liaehG~~ir~~~~-----~w~~~~~-----------~~~~~~w~~~v~~il~---~~~~r~~Gs~iE~K~~sl~~hyr 734 (942)
+++|+||++++...+ .|..... .....+|.+.+.++++ .+++++||++||+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 999999999974211 1211100 0113467755555554 46777899999999999999999
Q ss_pred ccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccCCCCCCCc--eEEEEeCCC
Q 002285 735 YADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRA-VGVTKGAAIDRILGEIVRHKGLKTPID--YVLCIGHFL 811 (942)
Q Consensus 735 ~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p-~gvnKG~Av~~Ll~~l~~~~~~~~~~d--~vl~iGD~d 811 (942)
++++++...++.++...+ .. ...+.++.|++++||+| .++|||.||++|++++++.. .+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~-----~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSN-----CDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCc-----ccceeEEEECC-C
Confidence 998776666666665555 21 12488999999999999 59999999999999998532 22 3599999 9
Q ss_pred CCCHHHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCccccccccccc
Q 002285 812 QKDEDIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMT 891 (942)
Q Consensus 812 ~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (942)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999998642
Q ss_pred ccCCCcccccCCCceEEEEeC--CCCCccceecCCHHHHHHHHHHhhhCc
Q 002285 892 LNEGSSVLDLRGENYFSCTVS--RKRSNARYFLGSSGDVVTLLNELAECP 939 (942)
Q Consensus 892 ~~~~~~~~~~~~~~~~t~~VG--~~~s~A~y~l~~~~~V~~~L~~L~~~~ 939 (942)
..+++|+|| .++|.|+|+|+||+||..||+.|++-.
T Consensus 343 ------------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 343 ------------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred ------------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 025677776 589999999999999999999998643
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=355.36 Aligned_cols=204 Identities=36% Similarity=0.571 Sum_probs=147.5
Q ss_pred EEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEEEe
Q 002285 606 ILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRL 685 (942)
Q Consensus 606 ~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir~ 685 (942)
||||||||++++++| +.+.++++++++|++|++++++.|+|+|||++.+++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999999 68899999999999999999999999999999997777777789999999999997
Q ss_pred CCC-ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCC-CCeE
Q 002285 686 TTG-EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISN-ASVD 763 (942)
Q Consensus 686 ~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~-~~v~ 763 (942)
+++ .|.... ...+..|++.+.++++++++++||++||+|+++++||||+++++++..++.++.+++ .+.... .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 666 454332 345678999999999999999999999999999999999999998888888888887 433333 4799
Q ss_pred EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 764 VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 764 v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
++.|+++|||+|.+++||.|+++|++.++..+ .+.+++||+|| |.|||+||++++..
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~---~~~~~~l~~GD-D~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFAG---PKPDFVLYIGD-DRTDEDAFRALREL 206 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTTS
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCccc---cccceeEEecC-CCCCHHHHHHHHhc
Confidence 99999999999999999999999999987432 34789999999 99999999999763
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=357.74 Aligned_cols=527 Identities=15% Similarity=0.158 Sum_probs=329.4
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhh-----------------cCCchHHHH-HHhhhccEEe
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR-----------------TLPSRTELL-RSVLAADLVG 303 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr-----------------~lp~r~~il-~~ll~aDlIg 303 (942)
.+|+||.|++.--.+...|++.. ++|++++.|.- ..+-++ .++.|-+.- ..+..||.|.
T Consensus 310 ~pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VI 386 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVI 386 (1050)
T ss_pred CCCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEE
Confidence 37999999888777788887765 68899999963 122221 012222221 2455789988
Q ss_pred ecCHHHHHHHHHHH-------HHHhccccCCCceecCCe-eeEEEEeeCccCccccchhcCChhhH-------------H
Q 002285 304 FHTYDYARHFVSAC-------TRILGLEGTPEGVEDQGR-LTRVAAFPIGIDSDRFVRALELPQVQ-------------D 362 (942)
Q Consensus 304 F~t~~~~~~Fl~~~-------~r~l~~~~~~~~i~~~gr-~~~v~viP~GID~~~f~~~~~~~~~~-------------~ 362 (942)
-.|......-...- .|.|... ...++.+.|+ ..++.|||+|||++.|.+.....+.. .
T Consensus 387 asT~qE~~eq~~lY~~~~~~~~~~~~~~-~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~ 465 (1050)
T TIGR02468 387 TSTRQEIEEQWGLYDGFDVILERKLRAR-ARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP 465 (1050)
T ss_pred EeCHHHHHHHHHHhccCCchhhhhhhhh-hcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence 77766554322110 0111000 0123332232 34899999999999998742211100 0
Q ss_pred HHHHHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHH----HHHHHHHHHH
Q 002285 363 HINELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEY----QKLTSQVHEI 436 (942)
Q Consensus 363 ~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y----~~l~~~l~~l 436 (942)
....++..+ +++++|++|||+++.||+..+|+||..+.+..+.. ++.+| +|.. .+..+. .....++.++
T Consensus 466 ~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~LI-iG~g--dd~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 466 IWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-MGNR--DDIDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred hhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEEE-EecC--chhhhhhccchHHHHHHHHH
Confidence 011233333 57789999999999999999999999987543221 24433 3321 111111 1234456666
Q ss_pred HHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc
Q 002285 437 VGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT----DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS 512 (942)
Q Consensus 437 v~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A----Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~ 512 (942)
+.+.+.. + .|. |.+.++.+++..+|+.| ||||+||++||||+|++||||| +.|||+|+.+|..+.
T Consensus 541 i~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----GlPVVASdvGG~~EI 609 (1050)
T TIGR02468 541 IDKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----GLPMVATKNGGPVDI 609 (1050)
T ss_pred HHHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh----CCCEEEeCCCCcHHH
Confidence 6665331 1 254 46789999999999988 6999999999999999999999 358999999998888
Q ss_pred c--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHHh-hhcccc------
Q 002285 513 L--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEA-QIRTRQ------ 583 (942)
Q Consensus 513 l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~-~~~~~~------ 583 (942)
+ |.+|++|+|.|++++|++|.++|+. ++.++++.+++++.+..|++...+++++..+..+...+ +.+...
T Consensus 610 I~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~ 688 (1050)
T TIGR02468 610 HRVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEA 688 (1050)
T ss_pred hccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCccccccccccccc
Confidence 7 6899999999999999999999975 45667777888899999999999999998887764332 111000
Q ss_pred C---CCC-------------------------------CC-------hhhhh--------------------hhhc--cc
Q 002285 584 V---PPS-------------------------------LP-------IKGAV--------------------DSYL--QS 600 (942)
Q Consensus 584 ~---~~~-------------------------------l~-------~~~~~--------------------~~y~--~s 600 (942)
. .+. ++ +...+ ..|. ..
T Consensus 689 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (1050)
T TIGR02468 689 SEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRR 768 (1050)
T ss_pred ccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCccccc
Confidence 0 000 00 00011 1121 22
Q ss_pred CCEEEE--EecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhh---hCCCCeEEEEcCCChhhHHHhhcccCc--
Q 002285 601 NNRLLI--LGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLC---DDPMTTVVVLSGSDRNVLDDNFGEYNM-- 673 (942)
Q Consensus 601 ~~rLi~--lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~---~d~g~~V~IvSGR~~~~L~~~~~~~~l-- 673 (942)
.+++|+ +|+|.| +.. .+.+.+.++.+. ......++++|||++..+.+++...++
T Consensus 769 ~~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~ 829 (1050)
T TIGR02468 769 RKRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNP 829 (1050)
T ss_pred cceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCC
Confidence 356666 899999 221 122333344443 223478899999999999998866533
Q ss_pred ----eEEeecceEEEeCC------Cceeecc--cCCCChhH-HHHHHHHHHHHHhcC--------CCeeeeeecce--EE
Q 002285 674 ----WLAAENGMFLRLTT------GEWMTTM--PENLNMDW-VDSVKHVFEYFTERT--------PRSHFEVRETS--LV 730 (942)
Q Consensus 674 ----~liaehG~~ir~~~------~~w~~~~--~~~~~~~w-~~~v~~il~~~~~r~--------~Gs~iE~K~~s--l~ 730 (942)
.+||.-|.+|+.+. ..|..-. ..+.+..| .+.+.+.+..+.... ++...+....+ ..
T Consensus 830 ~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k 909 (1050)
T TIGR02468 830 TDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHC 909 (1050)
T ss_pred CCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCce
Confidence 58999999998641 2222100 01234566 344665555554322 33445444332 33
Q ss_pred EEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceE-EEE
Q 002285 731 WNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQ--GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYV-LCI 807 (942)
Q Consensus 731 ~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~--G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~v-l~i 807 (942)
+-|.-.+++.. ...+++.+.|... ...+.++. +...++|.|..++||.||++|+.+++ ++.+.+ +++
T Consensus 910 ~SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~Vfa 979 (1050)
T TIGR02468 910 YAFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFV 979 (1050)
T ss_pred EEEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEe
Confidence 33431232221 1234555555111 22344433 45799999999999999999999998 566776 669
Q ss_pred eCCCCC-C-HHHHH
Q 002285 808 GHFLQK-D-EDIYT 819 (942)
Q Consensus 808 GD~d~n-D-EdMF~ 819 (942)
|| ..| | |+|+.
T Consensus 980 Gd-SGntD~e~Ll~ 992 (1050)
T TIGR02468 980 GE-SGDTDYEGLLG 992 (1050)
T ss_pred cc-CCCCCHHHHhC
Confidence 99 888 9 66653
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=327.70 Aligned_cols=238 Identities=21% Similarity=0.326 Sum_probs=201.9
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeec
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAEN 679 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaeh 679 (942)
|++++|||||||||+++.++| ..+.++++++++|++|++++++.|+|+|||++.++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 57789999999999999999999999999999999887766689999999
Q ss_pred ceEEEeCCC--ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEecc-chHHhHHHHHHHHHHHhcCC
Q 002285 680 GMFLRLTTG--EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYA-DLEFGRLQARDILQHLWSGP 756 (942)
Q Consensus 680 G~~ir~~~~--~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~a-d~e~~~~qa~el~~~L~~~~ 756 (942)
|++++.++. .|.... .....|++.+.++++++.++ ||+++|+|+++++||||.+ +++++..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNLT--EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeech--hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986322 244321 12247888888888888887 9999999999999999998 7888877888877766 2
Q ss_pred CCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCc
Q 002285 757 ISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRAN 836 (942)
Q Consensus 757 ~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~ 836 (942)
...++.++.|+.++|++|.++|||.|++++++.++ ...+.++|||| +.|||+||++++...
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~----------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQW----------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhccc-----------
Confidence 23468899999999999999999999999999987 34678999999 999999999984320
Q ss_pred ccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEe--CCC
Q 002285 837 AADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTV--SRK 914 (942)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~V--G~~ 914 (942)
+ ..++++|+| |.+
T Consensus 207 ------------------------------------------~-----------------------~~g~~~v~v~~g~~ 221 (244)
T TIGR00685 207 ------------------------------------------G-----------------------NYGFYPVPIGSGSK 221 (244)
T ss_pred ------------------------------------------C-----------------------CCCeEEEEEecCCc
Confidence 0 014789999 888
Q ss_pred CCccceecCCHHHHHHHHHHhh
Q 002285 915 RSNARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 915 ~s~A~y~l~~~~~V~~~L~~L~ 936 (942)
.|.|.|+++++++|..+|+.|+
T Consensus 222 ~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 222 KTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCCceEeCCCHHHHHHHHHHHh
Confidence 9999999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=328.24 Aligned_cols=235 Identities=17% Similarity=0.167 Sum_probs=196.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecce
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGM 681 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~ 681 (942)
+++||+||||||++++++| ++..++++++++|++|++++++.|+|+|||++..+.++++.++++++|+||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999998888 5778999999999999987899999999999999999999888889999999
Q ss_pred EEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCC
Q 002285 682 FLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNAS 761 (942)
Q Consensus 682 ~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~ 761 (942)
+++..++.|.. ...+.+|...+.+.++.++.++||+++|.|+.+++||||.++.+. ....++.+.+ .+.. ..
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~--~~~~~l~~~i-~~~~--~~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHE--DALLALAQRI-TQIW--PQ 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccH--HHHHHHHHHH-HhhC--Cc
Confidence 99865455432 123456677777888888889999999999999999999774211 1223333343 2211 13
Q ss_pred eEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccc
Q 002285 762 VDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHL 841 (942)
Q Consensus 762 v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~ 841 (942)
+.+..|+.++||+|+++|||.||++++++++ +..+.++|||| |.|||+||+++...
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~----------------- 212 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRL----------------- 212 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhc-----------------
Confidence 6678899999999999999999999999988 45688999999 99999999999542
Q ss_pred cccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCcccee
Q 002285 842 RRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYF 921 (942)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~ 921 (942)
++++|+||.+.|.|+|+
T Consensus 213 ---------------------------------------------------------------~g~~vavg~a~~~A~~~ 229 (266)
T PRK10187 213 ---------------------------------------------------------------GGISVKVGTGATQASWR 229 (266)
T ss_pred ---------------------------------------------------------------CCeEEEECCCCCcCeEe
Confidence 36999999999999999
Q ss_pred cCCHHHHHHHHHHhhhCcC
Q 002285 922 LGSSGDVVTLLNELAECPQ 940 (942)
Q Consensus 922 l~~~~~V~~~L~~L~~~~~ 940 (942)
|++|++|.+||+.|+..+|
T Consensus 230 l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 230 LAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCHHHHHHHHHHHHHhhh
Confidence 9999999999999997665
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-25 Score=265.08 Aligned_cols=322 Identities=14% Similarity=0.176 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhh-----CCCCeEEEEeccC-CCC---hhHhh--cCCc-
Q 002285 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY-----NNNMKVGWFLHTP-FPS---SEIHR--TLPS- 288 (942)
Q Consensus 221 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~-----~p~~~I~~flH~P-fP~---~e~fr--~lp~- 288 (942)
....|.-+.++.++.+.+.-..+||||+||||..++|.++.+. ..+++++|++|.- |.. .+.+. .+|+
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 3455555666666655544347899999999999985554432 3567899999975 221 11111 1221
Q ss_pred --------------hHHH-HHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccch
Q 002285 289 --------------RTEL-LRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVR 353 (942)
Q Consensus 289 --------------r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~ 353 (942)
+-.+ ..++..||.|..-++.|++.... ..-.|++. .+..+..++.+||||||++.|.+
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnP 741 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNP 741 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCC
Confidence 1112 24666799999888888887554 11011110 12345678999999999999886
Q ss_pred hcCC-------h-hh---HHHHHHHHHHhc------CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 354 ALEL-------P-QV---QDHINELKERFA------GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 354 ~~~~-------~-~~---~~~~~~lr~~~~------~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
.... . .. ......++++++ +.++|++||||++.||++.+++|+.++++ ++ +.|+++
T Consensus 742 atD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIv- 814 (977)
T PLN02939 742 STDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLL- 814 (977)
T ss_pred ccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEE-
Confidence 5321 0 00 012345676763 35899999999999999999999998875 33 345544
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
|+|++. .+++++.+++.+++.. ..|.|+ +.++......+|+.||+||+||.+|||||+++|||+|
T Consensus 815 ----GdGp~~-~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy--- 879 (977)
T PLN02939 815 ----GSSPVP-HIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY--- 879 (977)
T ss_pred ----eCCCcH-HHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC---
Confidence 444421 3456677777765321 125554 5577777789999999999999999999999999999
Q ss_pred CCceEEEeCCCCccccc-----------CCceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhHHHHhcCHHHH
Q 002285 497 KKGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVASSIGYALN---MPADEREKRHLHNFMHVTTHTSQEW 562 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~l-----------g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W 562 (942)
+.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.++.+.++. ....|++...
T Consensus 880 -GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~ 956 (977)
T PLN02939 880 -GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSS 956 (977)
T ss_pred -CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHH
Confidence 3589999999988765 257999999999999999999875 3455555554443 2367999999
Q ss_pred HHHHHHHHHHhH
Q 002285 563 AATFVSELNDTI 574 (942)
Q Consensus 563 ~~~fl~~L~~~~ 574 (942)
++.++.....+.
T Consensus 957 A~qYeeLY~~ll 968 (977)
T PLN02939 957 ASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHH
Confidence 999887666554
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-24 Score=264.18 Aligned_cols=310 Identities=14% Similarity=0.120 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhh-----CCCCeEEEEeccCCCChhHhhcCCchHHHHHH
Q 002285 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY-----NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS 295 (942)
Q Consensus 221 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~-----~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ 295 (942)
....|-.+++..++.+.+.-..+||||+||+|-.++|.++++. ..++++++++|..- |. ...+-.+
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk~~ 758 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHHHH
Confidence 3566666677777766554447899999999999999998874 35688999999742 11 1123456
Q ss_pred hhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCC--h-----h----h-HHH
Q 002285 296 VLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALEL--P-----Q----V-QDH 363 (942)
Q Consensus 296 ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~--~-----~----~-~~~ 363 (942)
+..||.|.--++.|++..... + . ...+..++.+||||||++.|.+.... + + . ...
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~ 825 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAA 825 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhh
Confidence 778999998888887665431 0 0 11234688999999999988764210 0 0 0 112
Q ss_pred HHHHHHHhc----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHh
Q 002285 364 INELKERFA----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGR 439 (942)
Q Consensus 364 ~~~lr~~~~----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~ 439 (942)
...++++++ +.++|++||||++.||++.+++|+.++++. + +.||++ |+||+ ..++.++.+++.+
T Consensus 826 k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIv-----G~Gpd-~~~e~~l~~La~~ 893 (1036)
T PLN02316 826 KEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLL-----GSAPD-PRIQNDFVNLANQ 893 (1036)
T ss_pred HHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEE-----eCCCC-HHHHHHHHHHHHH
Confidence 334666663 568999999999999999999999999863 3 334444 44443 2356777788777
Q ss_pred hccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--C---
Q 002285 440 INGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--G--- 514 (942)
Q Consensus 440 IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g--- 514 (942)
++..+. ..|.|+. ..+......+|+.||+||+||++|||||+.+|||+| +.|+|++..+|..+.+ +
T Consensus 894 Lg~~~~----~rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~----GtppVvs~vGGL~DtV~d~d~~ 964 (1036)
T PLN02316 894 LHSSHH----DRARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY----GSIPVVRKTGGLFDTVFDVDHD 964 (1036)
T ss_pred hCccCC----CeEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc----CCCeEEEcCCCcHhhccccccc
Confidence 654332 1255443 344444458999999999999999999999999999 2479999999999887 2
Q ss_pred ----------CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHHh
Q 002285 515 ----------AGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 515 ----------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~ 573 (942)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..+++..-++.++.....+
T Consensus 965 ~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 965 KERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred cccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 4799999999999999999999864333333333344443 5689999998887766544
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-24 Score=254.49 Aligned_cols=310 Identities=19% Similarity=0.225 Sum_probs=205.0
Q ss_pred HHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhC----CCCeEEEEeccCCC-C---hhHhhc--CCc---------
Q 002285 228 ANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYN----NNMKVGWFLHTPFP-S---SEIHRT--LPS--------- 288 (942)
Q Consensus 228 vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~----p~~~I~~flH~PfP-~---~e~fr~--lp~--------- 288 (942)
+++...+.+...-.++||||+||||-.+++.++++.. .+++++++.|..-. . .+.+.. +|+
T Consensus 104 f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 104 FSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3444444333322378999999999999999998653 46899999998621 1 111111 110
Q ss_pred ----hHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCce--ecCCeeeEEEEeeCccCccccchhcCCh----
Q 002285 289 ----RTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGV--EDQGRLTRVAAFPIGIDSDRFVRALELP---- 358 (942)
Q Consensus 289 ----r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i--~~~gr~~~v~viP~GID~~~f~~~~~~~---- 358 (942)
..-+..++..||.|...+..+++..... .. ..++ .+..+..++.++|||||.+.|.+.....
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~-----~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~ 255 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTP---EF-----GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAAN 255 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cC-----CcChHHHHHhcccCceEecCCCCccccCCccCcccccc
Confidence 0112234556777666666555433210 00 0001 0112355799999999999987642110
Q ss_pred -------hhHHHHHHHHHHhc----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHH
Q 002285 359 -------QVQDHINELKERFA----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQ 427 (942)
Q Consensus 359 -------~~~~~~~~lr~~~~----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~ 427 (942)
...+....++++++ +.++|++|||+++.||++.+|+|+++++++ + +.|+++| +++.
T Consensus 256 ~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG-----~g~~-- 322 (466)
T PRK00654 256 YSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLG-----TGDP-- 322 (466)
T ss_pred cChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEe-----cCcH--
Confidence 00112345666663 568999999999999999999999998764 3 4455554 3321
Q ss_pred HHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC
Q 002285 428 KLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA 507 (942)
Q Consensus 428 ~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~ 507 (942)
.+++++++++.+.+.+ +.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+| +.|+|+|+.+
T Consensus 323 ~~~~~l~~l~~~~~~~--------v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~----G~p~V~~~~g 389 (466)
T PRK00654 323 ELEEAFRALAARYPGK--------VGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY----GTLPIVRRTG 389 (466)
T ss_pred HHHHHHHHHHHHCCCc--------EEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC----CCCEEEeCCC
Confidence 2455677776655321 4444443 5666789999999999999999999999999999 3579999999
Q ss_pred Cccccc--C------CceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 508 GAAQSL--G------AGAILVNPWNITEVASSIGYALNM--PADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 508 G~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
|..+.+ + .+|++|+|.|+++++++|.++++. .++.++++.++++ ...++++.-++++++...++
T Consensus 390 G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 390 GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999887 4 679999999999999999999863 2333444444443 25788888888887665543
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-25 Score=250.00 Aligned_cols=300 Identities=23% Similarity=0.223 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhcc
Q 002285 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAAD 300 (942)
Q Consensus 221 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aD 300 (942)
.+..|...++.++..+. ...++|+||+|+++.+.++...+. ..+++++++|+++.... .. .+..+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~-~~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~~--~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPL-LDLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--RR--VWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccc-ccCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--HH--HHHHHHHHHHhCC
Confidence 36677777777765432 223689999999997666655442 36778889999875321 10 0122333344577
Q ss_pred EEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceE
Q 002285 301 LVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVM 377 (942)
Q Consensus 301 lIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 377 (942)
.+.+.+.++++. . +. ..++ ++|+|||+.........+ +....+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~----------------~--~~--~~~~-vipngvd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPP----------------Q--VP--PRKV-IIPPSIDPLSGKNRELSP---ADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCC----------------C--CC--CceE-EeCCCCCCCccccCCCCH---HHHHHHHHHhCCCCCCcEE
Confidence 776655322111 1 11 1234 899999975422111111 2233455555 377899
Q ss_pred EEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCC
Q 002285 378 LGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR 457 (942)
Q Consensus 378 l~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~ 457 (942)
+++||+++.||++.+|+|++.+.+.+|+++ |+++|.+.. ..+++.++.+++.+ +.+.. ..|.|++.
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~-~~~~~~~~~~~~~~---~~~~~------~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGAT-DDPEGWIVYEEVLE---YAEGD------PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCC-CCchhHHHHHHHHH---HhCCC------CCeEEEec
Confidence 999999999999999999999988878754 665654321 11223333233222 22211 13666544
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHH
Q 002285 458 S-LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGY 534 (942)
Q Consensus 458 ~-v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~ 534 (942)
. ++.+++.++|++||+|++||.+||||++++||||| +.|+|+|+.+|..+.+ |.+|+++++ .++++++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~----G~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK----GKPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc----CCCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 48999999999999999999999999999999999 3689999999988877 678999874 5688999999
Q ss_pred HhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHH
Q 002285 535 ALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELND 572 (942)
Q Consensus 535 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 572 (942)
++++ ++++.++.+++++++ ..|+++..++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 567777788888876 589999999999887764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-24 Score=252.67 Aligned_cols=313 Identities=19% Similarity=0.253 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCC--CCeEEEEeccCCCC----hhHhhc--CCch-----
Q 002285 223 DAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNN--NMKVGWFLHTPFPS----SEIHRT--LPSR----- 289 (942)
Q Consensus 223 ~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p--~~~I~~flH~PfP~----~e~fr~--lp~r----- 289 (942)
..+..+++...+.+.+.-..+|+||+||+|..++|.++++... +++++++.|..... .+.+.. +|+.
T Consensus 109 ~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 109 ERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 3444455555555544334789999999999999999987764 38999999986421 122221 1110
Q ss_pred --------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee--cCCeeeEEEEeeCccCccccchhcCCh-
Q 002285 290 --------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE--DQGRLTRVAAFPIGIDSDRFVRALELP- 358 (942)
Q Consensus 290 --------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~~~~~- 358 (942)
..+..++..||.|..-+..|++..... ..+ .++. +..+..++.++|||||.+.|.+.....
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~ 260 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYL 260 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccc
Confidence 012234556677666666555543221 000 0110 111356899999999999987642210
Q ss_pred ----------hhHHHHHHHHHHhc-----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCCh
Q 002285 359 ----------QVQDHINELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDV 423 (942)
Q Consensus 359 ----------~~~~~~~~lr~~~~-----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~ 423 (942)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++| ++
T Consensus 261 ~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G-----~g 329 (473)
T TIGR02095 261 KANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLG-----TG 329 (473)
T ss_pred ccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEEC-----CC
Confidence 00112344666663 5789999999999999999999999997642 4455553 34
Q ss_pred hHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEE
Q 002285 424 PEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLIL 503 (942)
Q Consensus 424 ~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIl 503 (942)
+ ..+++++++++.+.+. .+.++ ...+.+++..+|+.||++|+||.+||||++.+|||+| +.|+|+
T Consensus 330 ~--~~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----G~pvI~ 394 (473)
T TIGR02095 330 D--PELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY----GTVPIV 394 (473)
T ss_pred C--HHHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC----CCCeEE
Confidence 2 1245667777654322 14443 4467888899999999999999999999999999999 358999
Q ss_pred eCCCCccccc--C------CceEEECCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 504 SEFAGAAQSL--G------AGAILVNPWNITEVASSIGYALNM---PADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 504 Se~~G~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
|+.+|..+.+ + .+|++|+|.|+++++++|.+++.+ .++.++++.+++. .+.+++++.++++++..+
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 395 RRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred ccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 9999999888 4 789999999999999999999872 3444555554443 357899998888876554
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=250.49 Aligned_cols=313 Identities=14% Similarity=0.156 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChh--Hhh------------cCC
Q 002285 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSE--IHR------------TLP 287 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e--~fr------------~lp 287 (942)
|.....+...+...+.+....+|+||+|+++..++..++++.. +.|++++.|....... +.. .+.
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNIS 172 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchH
Confidence 4333444444444443333357999999987666666666544 5788999997432110 000 000
Q ss_pred chHH-HHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCC-eeeEEEEeeCccCccccchhcCChhhHHHHH
Q 002285 288 SRTE-LLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQG-RLTRVAAFPIGIDSDRFVRALELPQVQDHIN 365 (942)
Q Consensus 288 ~r~~-il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~g-r~~~v~viP~GID~~~f~~~~~~~~~~~~~~ 365 (942)
.+.. ....+..+|.|...+...+...+. .+.+ ...++.++|||||++.|.+....+.......
T Consensus 173 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~ 237 (439)
T TIGR02472 173 RRIEAEEETLAHASLVITSTHQEIEEQYA---------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDN 237 (439)
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHHH---------------hccCCCccceEEECCCcChhhcCCCCccccchhHHH
Confidence 0000 011233466555444322111100 0111 3467899999999999976432211111111
Q ss_pred HHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhH---HH----HHHHHHHHH
Q 002285 366 ELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPE---YQ----KLTSQVHEI 436 (942)
Q Consensus 366 ~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~---y~----~l~~~l~~l 436 (942)
.+++.. +++++|++||||++.||++.+|+||+++.+..+.. ++++ |+ |++++ ++ ++.+++..+
T Consensus 238 ~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l--i~----G~g~~~~~l~~~~~~~~~~~~~~ 309 (439)
T TIGR02472 238 LLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL--VL----GCRDDIRKMESQQREVLQKVLLL 309 (439)
T ss_pred HHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE--Ee----CCccccccccHHHHHHHHHHHHH
Confidence 222211 46789999999999999999999998753221111 2333 33 22221 11 223344555
Q ss_pred HHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc
Q 002285 437 VGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT----DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS 512 (942)
Q Consensus 437 v~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A----Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~ 512 (942)
+++++.. + .|. |.+.++.+++.++|+.| |+||+||.+||||++++||||| +.|+|+|+.+|+.+.
T Consensus 310 ~~~~~l~----~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~----G~PvV~s~~gg~~ei 378 (439)
T TIGR02472 310 IDRYDLY----G--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC----GLPIVATDDGGPRDI 378 (439)
T ss_pred HHHcCCC----c--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh----CCCEEEeCCCCcHHH
Confidence 5554321 1 254 56788999999999988 9999999999999999999999 358999999998887
Q ss_pred c--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 513 L--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 513 l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+ |.+|++|+|.|++++|++|.+++++ +++++++.+++++++ +.|+++.-++++++-|
T Consensus 379 v~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 379 IANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred hcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 7 5689999999999999999999985 456777778888876 5789999888887654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-24 Score=251.94 Aligned_cols=323 Identities=14% Similarity=0.187 Sum_probs=216.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhC------CCCeEEEEeccCCC----ChhHhh-cC
Q 002285 218 FQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYN------NNMKVGWFLHTPFP----SSEIHR-TL 286 (942)
Q Consensus 218 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~------p~~~I~~flH~PfP----~~e~fr-~l 286 (942)
|.+....|.-+++..++.+.+.--.+||||+||||-.++|.++++.. .+++++++.|+... +.+.+. .+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 43456677777777777665432367999999999999999998653 37899999998531 111111 12
Q ss_pred Cch------------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchh
Q 002285 287 PSR------------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRA 354 (942)
Q Consensus 287 p~r------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~ 354 (942)
|+. .-+-.++..||.|..-++.|++...+....-.|++ + .+..+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~----~-~l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD----K-VLEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH----H-HHHhcCCCeeEEeCCccccccCCc
Confidence 311 11233566788877777777665322000000100 0 011235689999999999998764
Q ss_pred cCCh--------hh---HHHHHHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 355 LELP--------QV---QDHINELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 355 ~~~~--------~~---~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
.... .. ......+++.+ .+.++|++||||.+.||++.+++|+.++++. + +.|+++|
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvivG-- 343 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVICG-- 343 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEEEe--
Confidence 3210 00 01123455444 2567999999999999999999999998753 3 4566554
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+|+. .+++++++++.+... .|.+ .+.++.+++..+|+.||+||+||.+||||++.+|||+| +
T Consensus 344 ---~G~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~----G 405 (489)
T PRK14098 344 ---SGDK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY----G 405 (489)
T ss_pred ---CCCH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC----C
Confidence 3432 245667777665421 2544 45688899999999999999999999999999999999 3
Q ss_pred ceEEEeCCCCccccc------CCceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 499 GVLILSEFAGAAQSL------GAGAILVNPWNITEVASSIGYALNM--PADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 499 G~lIlSe~~G~~~~l------g~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
.|+|++..+|..+.+ +.+|++|+|.|+++++++|.+++.. .++.++++.++. ..+.++++.-++++++-.
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 479999999988776 3589999999999999999997632 233333333332 236788888888887665
Q ss_pred HHh
Q 002285 571 NDT 573 (942)
Q Consensus 571 ~~~ 573 (942)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 543
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-24 Score=242.11 Aligned_cols=273 Identities=18% Similarity=0.227 Sum_probs=200.6
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
..+|+||+|+. +.+...++++.|.+++.+.+|..|.. +.+ ..++.|.+.+. +...++.. .
T Consensus 98 ~~~~vi~v~~~--~~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~-~~~~~~~~---~ 157 (380)
T PRK15484 98 TKDSVIVIHNS--MKLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQ-FLKKFYEE---R 157 (380)
T ss_pred CCCcEEEEeCc--HHhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCH-HHHHHHHh---h
Confidence 36899999984 34456677888999999999987631 111 13566666554 33333221 1
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
....++.++|+|||.+.|.+... ..+++++ .++++|+++||+.+.||++.+|+|+.
T Consensus 158 -------------~~~~~i~vIpngvd~~~~~~~~~--------~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 -------------LPNADISIVPNGFCLETYQSNPQ--------PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -------------CCCCCEEEecCCCCHHHcCCcch--------HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 11245789999999988864311 1233333 36788999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
++.+++|++ .|+++|.+...+..+...+.+++.+++.+++. .|+ +.+.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999889885 46666643322112234566677777766542 254 45778999999999999999999
Q ss_pred CCC-CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceE-EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 478 SLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 478 Sl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gl-lVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
|.+ ||||++++||||| +.|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.++.++++++
T Consensus 284 S~~~E~f~~~~lEAma~----G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAA----GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHc----CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 985 9999999999999 3578899988888877 66787 6789999999999999998763 45566777766
Q ss_pred H-HhcCHHHHHHHHHHHHHHh
Q 002285 554 V-TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 554 v-~~~~~~~W~~~fl~~L~~~ 573 (942)
+ ++|+++..++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 4 7899999999999888653
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-24 Score=244.74 Aligned_cols=276 Identities=18% Similarity=0.116 Sum_probs=200.4
Q ss_pred CCCEEEEcCCchhhHHHHHHhhC-CCCeEEEEeccCCCC-hhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYN-NNMKVGWFLHTPFPS-SEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~-p~~~I~~flH~PfP~-~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
+.|+||+|..+.-.+..++++.. ...++.+++|.+-.. ..+.. ..+..+..-+..+|.|...+....+.+.+
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 67999999887766677776632 234556788864211 11110 01112233344688887766544333221
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
++....++.++|+|||.+.|.+.... ...+...|++|||+.+.||++.+|+|++.+
T Consensus 192 ------------~g~~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 ------------MGCPPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred ------------cCCCHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 11234578899999999988643210 123456799999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+++|+++ |+++ |+|+.. +++++++.+.+.. ..+.+.|.++.+++..+|+.||+||+||.
T Consensus 248 ~~~~~~~~----l~iv-----G~G~~~----~~l~~~~~~~~l~-------~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVAFR----YRIL-----GIGPWE----RRLRTLIEQYQLE-------DVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCCEE----EEEE-----ECchhH----HHHHHHHHHcCCC-------CeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 88888754 4444 566643 4455555544321 23345789999999999999999999998
Q ss_pred C------CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 480 R------DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 480 ~------EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
. ||+|++++||||| +.|+|+|+.+|+.+.+ |.+|++|+|.|++++|++|.+++++++++++++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~----G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAV----GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhC----CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 9999999999999 3579999999988887 67899999999999999999999977778888888888
Q ss_pred HHH-HhcCHHHHHHHHHHHHH
Q 002285 552 MHV-TTHTSQEWAATFVSELN 571 (942)
Q Consensus 552 ~~v-~~~~~~~W~~~fl~~L~ 571 (942)
+++ ..|+++..++++.+-+.
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHh
Confidence 887 66899999988877664
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-23 Score=242.93 Aligned_cols=316 Identities=18% Similarity=0.207 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh--cCCCCEEEEcCCchhhHHHHHHhh-CCCCeEEEEeccC-----CCChhHhhc--CCch
Q 002285 220 SQFDAYKRANQMFAKVVNNI--YEEGDVVWCHDYHLMFLPQCLKEY-NNNMKVGWFLHTP-----FPSSEIHRT--LPSR 289 (942)
Q Consensus 220 ~~w~~Y~~vN~~fa~~i~~~--~~~~DiIwvHDyhL~llp~~Lr~~-~p~~~I~~flH~P-----fP~~e~fr~--lp~r 289 (942)
+....|.-++++-.+.+... -.++||||+||||-.++|.+++.. ..+++++++.|.. ||. ..+.. +|+.
T Consensus 109 d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~ 187 (485)
T PRK14099 109 DNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPS 187 (485)
T ss_pred cHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChH
Confidence 33445554444444333222 126799999999999999988743 3467899999974 221 11111 1110
Q ss_pred -------------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee--cCCeeeEEEEeeCccCccccchh
Q 002285 290 -------------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE--DQGRLTRVAAFPIGIDSDRFVRA 354 (942)
Q Consensus 290 -------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~ 354 (942)
.-+-.++..||.|.--+..|++...+.. .| .++. +..+..++.+||||||++.|.+.
T Consensus 188 ~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~---~g-----~gl~~~l~~~~~ki~vI~NGID~~~f~p~ 259 (485)
T PRK14099 188 AFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPE---AG-----MGLDGLLRQRADRLSGILNGIDTAVWNPA 259 (485)
T ss_pred HcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhccc---CC-----cChHHHHHhhCCCeEEEecCCchhhcccc
Confidence 0123344556666555555544332100 00 0010 11235689999999999998765
Q ss_pred cCCh-------h-h---HHHHHHHHHHhc-----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 355 LELP-------Q-V---QDHINELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 355 ~~~~-------~-~---~~~~~~lr~~~~-----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
.... + . ......++++++ +.++|++||||.+.||++.+|+|+.++++. + +.|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG-- 331 (485)
T PRK14099 260 TDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLG-- 331 (485)
T ss_pred ccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEe--
Confidence 3210 0 0 011234556552 356888999999999999999999998753 3 3455553
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCCCCChhHHHHHhhccCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALY-AITDVALVTSLRDGMNLVSYEFVACQASK 497 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly-~~ADv~v~pSl~EG~~Lv~lEamA~~~~~ 497 (942)
+|+. .+++++++++.+... .+.++.+. .+++..+| +.||+||+||.+||||++.+|||+|
T Consensus 332 ---~G~~--~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~---- 392 (485)
T PRK14099 332 ---SGDA--ELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY---- 392 (485)
T ss_pred ---cCCH--HHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC----
Confidence 3331 245566666654321 13334454 57888877 4699999999999999999999999
Q ss_pred CceEEEeCCCCccccc--C---------CceEEECCCCHHHHHHHHHHH---hCCCHHHHHHHHHHHhHHHHhcCHHHHH
Q 002285 498 KGVLILSEFAGAAQSL--G---------AGAILVNPWNITEVASSIGYA---LNMPADEREKRHLHNFMHVTTHTSQEWA 563 (942)
Q Consensus 498 ~G~lIlSe~~G~~~~l--g---------~~gllVnP~D~~~lA~aI~~a---L~m~~~er~~r~~~~~~~v~~~~~~~W~ 563 (942)
+.++|+|..+|..+.+ + .+|++|+|.|+++++++|.++ ++ .++.++++.++++ .+.++++.-+
T Consensus 393 G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~-d~~~~~~l~~~~~--~~~fSw~~~a 469 (485)
T PRK14099 393 GAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAWRRLQRNGM--TTDVSWRNPA 469 (485)
T ss_pred CCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHhh--hhcCChHHHH
Confidence 2478889999988877 2 479999999999999999984 44 3445555555544 4679999989
Q ss_pred HHHHHHHHHhH
Q 002285 564 ATFVSELNDTI 574 (942)
Q Consensus 564 ~~fl~~L~~~~ 574 (942)
+++++...++.
T Consensus 470 ~~y~~lY~~l~ 480 (485)
T PRK14099 470 QHYAALYRSLV 480 (485)
T ss_pred HHHHHHHHHHH
Confidence 88877666553
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-23 Score=234.62 Aligned_cols=290 Identities=18% Similarity=0.192 Sum_probs=209.6
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhh---cCCc--hHHHH--HHhhhccEEeecCHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR---TLPS--RTELL--RSVLAADLVGFHTYDYARHF 313 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr---~lp~--r~~il--~~ll~aDlIgF~t~~~~~~F 313 (942)
..+|+||+|++....++.++++. .++++++++|..+.-...+. ..+. ...++ ..+..+|.|.+.+...++.+
T Consensus 100 ~~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~ 178 (405)
T TIGR03449 100 GYYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDL 178 (405)
T ss_pred CCCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHH
Confidence 36899999986655555555543 36788999997532111110 0111 11222 23446899999888777665
Q ss_pred HHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHH
Q 002285 314 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIP 390 (942)
Q Consensus 314 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~ 390 (942)
... . +....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+.
T Consensus 179 ~~~----~-----------~~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~ 235 (405)
T TIGR03449 179 VRH----Y-----------DADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPD 235 (405)
T ss_pred HHH----c-----------CCChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHH
Confidence 431 1 12245788999999998886431 11123344 3678999999999999999
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCCh-hHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDV-PEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~-~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
.+++|++++++++|+. ++.|+++|.+. +++ +.. +++++++.+.+.. ..|. +.+.++.+++..+|+
T Consensus 236 ~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~ 301 (405)
T TIGR03449 236 VLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYR 301 (405)
T ss_pred HHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHH
Confidence 9999999999988874 37788777543 233 332 3445555544321 1255 467899999999999
Q ss_pred HccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHH
Q 002285 470 ITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 470 ~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
.||++++||..||||++++|||+| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.+.++.
T Consensus 302 ~ad~~v~ps~~E~~g~~~lEAma~----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~ 376 (405)
T TIGR03449 302 AADVVAVPSYNESFGLVAMEAQAC----GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMG 376 (405)
T ss_pred hCCEEEECCCCCCcChHHHHHHHc----CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 999999999999999999999999 3578888988888777 5789999999999999999999975 45666777
Q ss_pred HHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 548 LHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 548 ~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
.++++.++.++++..++++++-+.++
T Consensus 377 ~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 377 AAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 77788888999999999988776654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-22 Score=239.84 Aligned_cols=313 Identities=20% Similarity=0.230 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhC-----CCCeEEEEeccCCCCh----hHhhc--CCc--
Q 002285 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYN-----NNMKVGWFLHTPFPSS----EIHRT--LPS-- 288 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~-----p~~~I~~flH~PfP~~----e~fr~--lp~-- 288 (942)
...|..+++...+.+.+.-..+|+||+||+|-.+++.+++... .+++++++.|.+.+.. ..+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 4445555566656555544578999999999999999998764 5789999999874321 11111 111
Q ss_pred ------------hHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee--cCCeeeEEEEeeCccCccccchh
Q 002285 289 ------------RTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE--DQGRLTRVAAFPIGIDSDRFVRA 354 (942)
Q Consensus 289 ------------r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~ 354 (942)
..-+..++..||.|...+..+++...+.. . ..++. ...+..++.++|||||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-------~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-------F-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-------C-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 01222345566776666655555433200 0 00110 11234689999999999998764
Q ss_pred cCChh-----------hHHHHHHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 355 LELPQ-----------VQDHINELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 355 ~~~~~-----------~~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
..... .......+++++ .++++|+++||+.+.||++.+++|++++.++. +.|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G-- 332 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILG-- 332 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEe--
Confidence 32110 112234456555 36789999999999999999999999987653 3455554
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+++. .+++++.+++.+... .|+++.+ .+.+++..+|+.||++|+||.+||||++.+|||+| +
T Consensus 333 ---~g~~--~~~~~~~~~~~~~~~--------~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----G 394 (476)
T cd03791 333 ---SGDP--EYEEALRELAARYPG--------RVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY----G 394 (476)
T ss_pred ---cCCH--HHHHHHHHHHHhCCC--------cEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC----C
Confidence 3321 245566666554311 2555544 45778889999999999999999999999999999 3
Q ss_pred ceEEEeCCCCccccc--CC------ceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhHHHHhcCHHHHHHHHHH
Q 002285 499 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVASSIGYALNM--PADEREKRHLHNFMHVTTHTSQEWAATFVS 568 (942)
Q Consensus 499 G~lIlSe~~G~~~~l--g~------~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 568 (942)
.|+|+|+.+|..+.+ +. +|++|+|.|+++++++|.+++++ .++++.++.+++++ ..++++.-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 579999999999888 44 89999999999999999999863 23444444444433 35788888887766
Q ss_pred HH
Q 002285 569 EL 570 (942)
Q Consensus 569 ~L 570 (942)
..
T Consensus 473 ~y 474 (476)
T cd03791 473 LY 474 (476)
T ss_pred HH
Confidence 44
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-22 Score=240.68 Aligned_cols=332 Identities=13% Similarity=0.144 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCC----Chh-HhhcCCchHH----
Q 002285 222 FDAYKRANQMFAKVVNNIY-EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFP----SSE-IHRTLPSRTE---- 291 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~-~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP----~~e-~fr~lp~r~~---- 291 (942)
|.....+....++.+.... ..+|+||.|.+.--+++..++++. +++.+++.|..=. ... .+..+..+..
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555555566666554433 368999999876667777776665 6787777785311 000 0111100000
Q ss_pred ---HHHHhhhccEEeecCHHHHHHHHHHHH-----HHhccc---cCCCceecCCeeeEEEEeeCccCccccchhcCChhh
Q 002285 292 ---LLRSVLAADLVGFHTYDYARHFVSACT-----RILGLE---GTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQV 360 (942)
Q Consensus 292 ---il~~ll~aDlIgF~t~~~~~~Fl~~~~-----r~l~~~---~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~ 360 (942)
-+..|..||.|.-.++.-...-...+. ..+... ..-.++.. ...++.++|+|||++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 124566789988777532111011110 001100 00012221 23488999999999999764321110
Q ss_pred -HHHH----------HHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCC---
Q 002285 361 -QDHI----------NELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRT--- 421 (942)
Q Consensus 361 -~~~~----------~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrg--- 421 (942)
.... ...++.+ .++++|++||||++.||+..+++||.++.+..++ +.|++||.+...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~----~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLREL----VNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCC----eEEEEEeCCcccccc
Confidence 0000 0112222 3678999999999999999999999886443333 567777754211
Q ss_pred ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH----HccEEEECCCCCCCChhHHHHHhhccCC
Q 002285 422 DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA----ITDVALVTSLRDGMNLVSYEFVACQASK 497 (942)
Q Consensus 422 d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~----~ADv~v~pSl~EG~~Lv~lEamA~~~~~ 497 (942)
...+..+..+++.+++.+.+.. + .|.|++...+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL~----g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc---- 666 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQLH----G--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC---- 666 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCCC----C--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc----
Confidence 1112223445666777665422 1 3665543345666667776 247999999999999999999999
Q ss_pred CceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 498 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALN---MPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 498 ~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++.+++++++ +.|+++..+++++..+
T Consensus 667 GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 667 GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3589999999999988 789999999999999999999873 34566777777778876 6799999999887654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-23 Score=235.40 Aligned_cols=281 Identities=17% Similarity=0.202 Sum_probs=192.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCC--hhH-hh-cCCch--------HH---HHHHhhhccEEeecC
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS--SEI-HR-TLPSR--------TE---LLRSVLAADLVGFHT 306 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~--~e~-fr-~lp~r--------~~---il~~ll~aDlIgF~t 306 (942)
.+|+|+.|. .+....++++..|+++++.++|..+-. .+. |. ..+.+ .. ....+..+|.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 579999995 445566788889998888766543311 110 10 11111 11 223455677777665
Q ss_pred HHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeec-
Q 002285 307 YDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDR- 382 (942)
Q Consensus 307 ~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgR- 382 (942)
......|.. .+ ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~---------------~~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA---------------EL---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH---------------hh---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 443332211 01 2478899999999998764211 01111111 46788999998
Q ss_pred ccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC--C----ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeC
Q 002285 383 LDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR--T----DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLD 456 (942)
Q Consensus 383 Ld~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr--g----d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~ 456 (942)
+.+.||++.+|+|+..+.+.+|+++ |+++|.... + +++. ++++ +..+++.+.. ...|+ |.
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~---~~~~---~~~~~~~~~~---~~~V~-f~ 286 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGES---WKQH---MLDELGGRLD---LSRVH-FL 286 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCccc---HHHH---HHHHhhcccC---cceEE-Ee
Confidence 9999999999999999998888865 565553211 0 1111 1222 2222221111 12355 46
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHH
Q 002285 457 RSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGY 534 (942)
Q Consensus 457 ~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~ 534 (942)
|.++.+++.++|+.||++++||..||+|++++||||| +.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.+
T Consensus 287 G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~----G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ 362 (396)
T cd03818 287 GRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC----GCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIE 362 (396)
T ss_pred CCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC----CCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHH
Confidence 8899999999999999999999999999999999999 3579999988888887 578999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHH
Q 002285 535 ALNMPADEREKRHLHNFMHVTT-HTSQEWAATFV 567 (942)
Q Consensus 535 aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 567 (942)
+++++ +++.++.+++++++.+ ++++..+++++
T Consensus 363 ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 363 LLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99864 5777788888988876 88777777665
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=237.35 Aligned_cols=283 Identities=18% Similarity=0.138 Sum_probs=196.4
Q ss_pred HHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh---hHhhc---CCchHH--------HHH-Hhhhc
Q 002285 235 VVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS---EIHRT---LPSRTE--------LLR-SVLAA 299 (942)
Q Consensus 235 ~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~---e~fr~---lp~r~~--------il~-~ll~a 299 (942)
.+...+.+.|+||+|......++..+..+..+.|+.++.|.-++.. +++.. ....+. +.+ .+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555566889999998765555555544455789999999866521 12111 000000 111 11234
Q ss_pred cEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEE
Q 002285 300 DLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLG 379 (942)
Q Consensus 300 DlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~ 379 (942)
|.|...+...... + ..++....++.++|||||.+.|.+.... ....++++|++
T Consensus 246 d~Ii~~s~~~~~~-~---------------~~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRER-Q---------------IEDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHH-H---------------HHcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 5544433221111 1 1122345678999999999988753210 11246789999
Q ss_pred eecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCC
Q 002285 380 VDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL 459 (942)
Q Consensus 380 VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v 459 (942)
+||+.+.||++.+|+|++.+.++.|+++ |+++| ++++...+.+++++++.+++.. ..|+|+ +
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG-----~g~~~~~~~~e~~~li~~l~l~------~~V~f~-G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIG-----PTDEDPEYAEECRELVESLGLE------DNVKFT-G-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeE----EEEEC-----CCCcChHHHHHHHHHHHHhCCC------CeEEEc-C--
Confidence 9999999999999999999998888854 55443 3322234566777777776532 136654 4
Q ss_pred CHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCC--------ceEEECCCCHHHHHHH
Q 002285 460 DFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVASS 531 (942)
Q Consensus 460 ~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~--------~gllVnP~D~~~lA~a 531 (942)
.+++..+|+.||++|+||..||||++++||||| +.|+|+|+.+|+.+.+.. +|++++|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~----G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA----GIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc----CCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 678999999999999999999999999999999 357899999888877733 7999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHHH
Q 002285 532 IGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATFVS 568 (942)
Q Consensus 532 I~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 568 (942)
|.+++++ ++.+.++.+++++++.+ ++.+..+++|.+
T Consensus 436 i~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999985 55677777888888765 466777777654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-22 Score=235.42 Aligned_cols=273 Identities=18% Similarity=0.211 Sum_probs=194.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchH----HHHHHh-hhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRT----ELLRSV-LAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~----~il~~l-l~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+||+|+...+.++.++-.+..++|+++.+|.-+|.........+.. .+.+.+ ..+|.|...+....+.+..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 6899999987666555544333346788888887554321000111100 111222 2477777776655554432
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh----cCCceEEEeecccccCCHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF----AGRKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIl~VgRLd~~KGi~~l 392 (942)
.+ .....++.++|+|||.+.|.+..... .+++++ +++++|+++||+.+.||++.+
T Consensus 223 ----~~----------~~~~~kv~vi~nGvd~~~f~p~~~~~-------~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AG----------VTAANRIRVWNKGVDSESFHPRFRSE-------EMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cC----------CCCcCeEEEeCCccCccccCCccccH-------HHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 01 01235788999999999987543221 123333 367899999999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|++++ |++ .|+++ |+|+.. +++++++... +|+| .|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~~----~l~iv-----G~G~~~----~~l~~~~~~~----------~V~f-~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PGA----RLAFV-----GDGPYR----EELEKMFAGT----------PTVF-TGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CCc----EEEEE-----eCChHH----HHHHHHhccC----------CeEE-eccCCHHHHHHHHHHCC
Confidence 9998764 554 45555 466643 3444444321 3554 68899999999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
+||+||..||||++++||||| +.|+|+|+.+|+.+.+ |.+|++|+|.|+++++++|.+++++ ++.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~----G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMAS----GVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHc----CCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 999999999999999999999 3579999999988776 4679999999999999999999975 56777778
Q ss_pred HHHhHHHHhcCHHHHHHHHHHH
Q 002285 548 LHNFMHVTTHTSQEWAATFVSE 569 (942)
Q Consensus 548 ~~~~~~v~~~~~~~W~~~fl~~ 569 (942)
+++++++++|+++..++.++..
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~ 430 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNE 430 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHH
Confidence 8889999999999999999874
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-22 Score=225.57 Aligned_cols=287 Identities=18% Similarity=0.184 Sum_probs=201.9
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHh-----hcCCchHHH-HHHhhhccEEeecCHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH-----RTLPSRTEL-LRSVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~f-----r~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl 314 (942)
...|+||+|++...+++.+++ +..+.++++.+|..+|..... ........+ ...+..+|.|...+....+.+.
T Consensus 82 ~~~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 160 (388)
T TIGR02149 82 VDADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDIL 160 (388)
T ss_pred CCCCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHH
Confidence 368999999987765555544 345788899999866532110 000001111 2234467888777765555443
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQ 391 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~ 391 (942)
+. .. +-...++.++|+|+|.+.|.+.. ...+++++ .++++|+++||+.+.||++.
T Consensus 161 ~~----~~----------~~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~ 218 (388)
T TIGR02149 161 KY----YP----------DLDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPH 218 (388)
T ss_pred HH----cC----------CCCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHH
Confidence 21 00 11245788999999998876431 11233343 35678999999999999999
Q ss_pred HHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc
Q 002285 392 KILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT 471 (942)
Q Consensus 392 lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A 471 (942)
+++|++++. +++ .|+.++. ++...++.+++++++..++... ..|+++.+.++.+++..+|+.|
T Consensus 219 li~a~~~l~---~~~----~l~i~g~-----g~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 219 LLDAVHYIP---KDV----QVVLCAG-----APDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred HHHHHHHHh---hcC----cEEEEeC-----CCCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhC
Confidence 999999874 333 3444432 2222234555666655543221 1367788889999999999999
Q ss_pred cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCH------HHHHHHHHHHhCCCHHHH
Q 002285 472 DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVASSIGYALNMPADER 543 (942)
Q Consensus 472 Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~------~~lA~aI~~aL~m~~~er 543 (942)
|++|+||..||||++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|. ++++++|.++++. ++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~----G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~ 356 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMAC----GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELA 356 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHc----CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHH
Confidence 9999999999999999999999 3589999999988877 568999999998 9999999999975 5567
Q ss_pred HHHHHHHhHHH-HhcCHHHHHHHHHHHHHH
Q 002285 544 EKRHLHNFMHV-TTHTSQEWAATFVSELND 572 (942)
Q Consensus 544 ~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 572 (942)
+++..++++.+ +.++++.+++++++.+++
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 77777777766 679999999999877664
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.8e-22 Score=237.95 Aligned_cols=331 Identities=13% Similarity=0.114 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccC-----------CCChh-HhhcC-C
Q 002285 222 FDAYKRANQMFAKVVNNIY-EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTP-----------FPSSE-IHRTL-P 287 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~-~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~P-----------fP~~e-~fr~l-p 287 (942)
|....+++...++.+.... ..+|+||.|.+.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6666666666666554333 368999999665556777777665 78888888842 10000 01100 0
Q ss_pred chHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhcc-ccC-C------CceecCCeeeEEEEeeCccCccccchhcCChh
Q 002285 288 SRTELLRSVLAADLVGFHTYDYARHFVSACTRILGL-EGT-P------EGVEDQGRLTRVAAFPIGIDSDRFVRALELPQ 359 (942)
Q Consensus 288 ~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~-~~~-~------~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~ 359 (942)
...+.+ .|..||.|.-.|+.-....-..+..+-.- ..+ + .++.+. ..++.++|+|+|...|.+......
T Consensus 466 ~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTADLI-AMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHHHH-HHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 001111 34456665544432211000000000000 000 0 112111 237889999999998875321100
Q ss_pred --------hHHHH---HHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC-
Q 002285 360 --------VQDHI---NELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD- 422 (942)
Q Consensus 360 --------~~~~~---~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd- 422 (942)
..+.. ...++.+ .++++|++|||+++.||+..+|+||.++.+..++ +.|++||.+..+.
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 00000 0011122 3567999999999999999999999988766655 4577676431111
Q ss_pred --hhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCC---CCCHHHHHHHHH-HccEEEECCCCCCCChhHHHHHhhccC
Q 002285 423 --VPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR---SLDFHALCALYA-ITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 423 --~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~---~v~~~el~aly~-~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
..+..+..+++.+++.+.+.. + .|.|++. .++..++..+|+ ++|+||+||.+||||+|++|||||
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~--- 689 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTC--- 689 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHc---
Confidence 111112234566666665432 1 2555432 445577888777 579999999999999999999999
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 497 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALN---MPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|..++. .+++.+.++.+++++++ +.|+++..++++++-.
T Consensus 690 -GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 690 -GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred -CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3589999999999888 789999999999999999987652 45667777778888887 6799999999887754
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=221.16 Aligned_cols=209 Identities=18% Similarity=0.224 Sum_probs=159.6
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEE
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLI 413 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLv 413 (942)
..++.++|+|||.+.|.+..... ....++.+ .++++|+++||+++.||+..+|+|+..+++++|+...++.|+
T Consensus 159 ~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~ 233 (374)
T TIGR03088 159 PAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLV 233 (374)
T ss_pred hhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEE
Confidence 45788999999998886542111 11111222 457799999999999999999999999999888654457777
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhh
Q 002285 414 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493 (942)
Q Consensus 414 qi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~ 493 (942)
++| +|+.. +++++++.+.+.. ..+++.+. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 234 i~G-----~g~~~----~~~~~~~~~~~~~-------~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~ 295 (374)
T TIGR03088 234 IVG-----DGPAR----GACEQMVRAAGLA-------HLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS 295 (374)
T ss_pred Eec-----CCchH----HHHHHHHHHcCCc-------ceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc
Confidence 664 45433 3344444443321 23344553 578999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 494 QASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 494 ~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+.|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+++++ ++.+..+.+++++++ ..|++...++++++..
T Consensus 296 ----G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y 370 (374)
T TIGR03088 296 ----GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLY 370 (374)
T ss_pred ----CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3579999999988887 5689999999999999999999975 456777778888887 6899999988887765
Q ss_pred HH
Q 002285 571 ND 572 (942)
Q Consensus 571 ~~ 572 (942)
.+
T Consensus 371 ~~ 372 (374)
T TIGR03088 371 DQ 372 (374)
T ss_pred HH
Confidence 54
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-22 Score=227.16 Aligned_cols=278 Identities=15% Similarity=0.151 Sum_probs=192.8
Q ss_pred CCCEEEEcCCchhhH-HHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFL-PQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~ll-p~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.+|+||+|+++.... ..++..+..++++++..|..|+..+.... +...+.+ .+..+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 689999999765433 33333344468899999987653222111 1111222 2345788887776554433211
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
......++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||+..+|+|+..+
T Consensus 163 ------------~~~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 ------------ASLDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred ------------hCCChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 11124578899999999888653210 124678999999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+++|+++ |+++ |+++.... +++++.+.+.. + .|.| .|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~~----l~i~-----G~g~~~~~----l~~~~~~~~l~----~--~v~~-~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNVR----FIIG-----GDGPKRIL----LEEMREKYNLQ----D--RVEL-LGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCEE----EEEE-----eCCchHHH----HHHHHHHhCCC----C--eEEE-eCCCCHHHHHHHHHhCCEEEeCCh
Confidence 88888854 5544 45554433 44444443211 1 2554 578999999999999999999999
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCc-eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH-HHHhc
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVASSIGYALNMPADEREKRHLHNFM-HVTTH 557 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~-gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~-~v~~~ 557 (942)
.||||++++||||| +.|||+|+.+|..+.+..+ +++++ .|.++++++|.+++.++.+. .....++++ ..+.|
T Consensus 279 ~E~~g~~~~EAma~----G~PVI~s~~gg~~e~i~~~~~~~~~-~~~~~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASC----GLLVVSTRVGGIPEVLPPDMILLAE-PDVESIVRKLEEAISILRTG-KHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHc----CCCEEECCCCCchhheeCCceeecC-CCHHHHHHHHHHHHhChhhh-hhHHHHHHHHHHhhC
Confidence 99999999999999 3578899999988877333 44454 49999999999999875433 334444444 45779
Q ss_pred CHHHHHHHHHHHHHHhH
Q 002285 558 TSQEWAATFVSELNDTI 574 (942)
Q Consensus 558 ~~~~W~~~fl~~L~~~~ 574 (942)
+++.-++++++..+...
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999988777654
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-21 Score=218.98 Aligned_cols=295 Identities=20% Similarity=0.216 Sum_probs=204.3
Q ss_pred HHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhc-----CCc-hHHH-HHHhhhccEEeecC
Q 002285 234 KVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRT-----LPS-RTEL-LRSVLAADLVGFHT 306 (942)
Q Consensus 234 ~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~-----lp~-r~~i-l~~ll~aDlIgF~t 306 (942)
..+.+...++|+|++|.+....++..+.+. .++++.+..|........... .+. +..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 333333347899999988766666665544 367888888875432110000 000 1111 22345689998888
Q ss_pred HHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeeccccc
Q 002285 307 YDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMI 386 (942)
Q Consensus 307 ~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~ 386 (942)
......+... . .....++.++|+|+|.+.|.+..... .....+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~~----~-----------~~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYSL----Y-----------GAYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHHH----c-----------cccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 7665554321 1 11233588999999998886542211 1111111 12467899999999999
Q ss_pred CCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHH
Q 002285 387 KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCA 466 (942)
Q Consensus 387 KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~a 466 (942)
||+..+++|+..+.+++|++ .|+++|....... .....++++++.+.+.. ..|. +.+.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRERA----NLVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 99999999999998887774 4666654322111 12234455565554321 1244 568899999999
Q ss_pred HHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHH
Q 002285 467 LYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADERE 544 (942)
Q Consensus 467 ly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~ 544 (942)
+|+.||++++||..||+|++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ +++++
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~----G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMAC----GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhc----CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHH
Confidence 999999999999999999999999999 3579999999988887 4679999999999999999999976 45677
Q ss_pred HHHHHHhHHH-HhcCHHHHHHHHH
Q 002285 545 KRHLHNFMHV-TTHTSQEWAATFV 567 (942)
Q Consensus 545 ~r~~~~~~~v-~~~~~~~W~~~fl 567 (942)
.+..++++++ +.++++.++++++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7778888887 8899999988875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=225.34 Aligned_cols=290 Identities=12% Similarity=0.060 Sum_probs=188.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
.+|+||+|++...++..+.........|+...|. ++....-+.+- ++. ..+..++++.-.+. ++.+.....+.+.
T Consensus 280 rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~-~~~~~~~r~~~-~e~--~~~~~a~~i~~~sd-~v~~s~~v~~~l~ 354 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIAGVPRIQLGLRG-LPPVVRKRLFK-PEY--EPLYQALAVVPGVD-FMSNNHCVTRHYA 354 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecc-cCCcchhhHHH-HHH--HHhhhhceeEecch-hhhccHHHHHHHH
Confidence 6799999999876665555544433344555676 33221111110 010 12233344332221 2222222112111
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
. .++....+|.++|||||++.|.+....+ ......++..+ .+.++|++|+|+.+.||+..+|+|+.+++
T Consensus 355 ~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll 424 (578)
T PRK15490 355 D--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL 424 (578)
T ss_pred H--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH
Confidence 0 1122467899999999999887643211 01112222223 34578899999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|+++ |+++ |+|+. ++++++++.+.+.. ..|+|++ + .+++..+|+.||+||+||.+
T Consensus 425 k~~pdir----LvIV-----GdG~~----~eeLk~la~elgL~------d~V~FlG-~--~~Dv~~~LaaADVfVlPS~~ 482 (578)
T PRK15490 425 QHHPATR----FVLV-----GDGDL----RAEAQKRAEQLGIL------ERILFVG-A--SRDVGYWLQKMNVFILFSRY 482 (578)
T ss_pred hHCCCeE----EEEE-----eCchh----HHHHHHHHHHcCCC------CcEEECC-C--hhhHHHHHHhCCEEEEcccc
Confidence 9888854 5544 56664 34555555554321 1366554 3 57899999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhHHH-H
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMP--ADEREKRHLHNFMHV-T 555 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v-~ 555 (942)
||||++++||||| +.|+|+|+.+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.+++++++ +
T Consensus 483 EGfp~vlLEAMA~----GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e 558 (578)
T PRK15490 483 EGLPNVLIEAQMV----GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQE 558 (578)
T ss_pred cCccHHHHHHHHh----CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 3589999999988877 78999999999999998874432221 223444557778877 5
Q ss_pred hcCHHHHHHHHHHHHHH
Q 002285 556 THTSQEWAATFVSELND 572 (942)
Q Consensus 556 ~~~~~~W~~~fl~~L~~ 572 (942)
.|+++..++.+++.++.
T Consensus 559 ~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 559 RFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hCCHHHHHHHHHHHHHh
Confidence 79999999998877664
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=211.85 Aligned_cols=194 Identities=21% Similarity=0.343 Sum_probs=145.8
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFL 683 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~i 683 (942)
||++||||||++. ....++++++++|++|.++ +..|+|+|||+...+.++++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~-------------~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDP-------------NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCC-------------CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 5899999999985 2256899999999999984 6999999999999999999888889999999999
Q ss_pred EeCCCc-eeecccCCCChhHH---HHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCC-
Q 002285 684 RLTTGE-WMTTMPENLNMDWV---DSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPIS- 758 (942)
Q Consensus 684 r~~~~~-w~~~~~~~~~~~w~---~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~- 758 (942)
+..++. |.. . ......|. +.+..++..+...+++..+|.+...+++||+.... ......++...+ .....
T Consensus 67 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE-P-SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc-c-cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 864432 332 1 11111111 23344455556677888889999999999987511 111223334444 32221
Q ss_pred CCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 759 NASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 759 ~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
...+.+. .+..++||+|++++||.|++.++++++ ++.+++++||| +.||++||+.++.
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 699999999999999999999999987 56789999999 9999999999875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.7e-21 Score=212.27 Aligned_cols=276 Identities=19% Similarity=0.259 Sum_probs=192.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHh-hhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSV-LAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~l-l~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+||+|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.|...
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~---- 148 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIAS---- 148 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHhc----
Confidence 67999999999888888877776677888888864322111 01111110 11344433343333333321
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
..-...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+++|+.
T Consensus 149 -----------~~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~ 211 (360)
T cd04951 149 -----------KAFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFA 211 (360)
T ss_pred -----------cCCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHH
Confidence 001235788999999998876432 1122345444 36788999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
++.+++|+++ |+++ |+++..++ +.+.+.+.+.. ..|.++ +. .+++..+|+.||++++|
T Consensus 212 ~l~~~~~~~~----l~i~-----G~g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 212 KLLSDYLDIK----LLIA-----GDGPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIAAYYNAADLFVLS 269 (360)
T ss_pred HHHhhCCCeE----EEEE-----cCCCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHHHHHHhhceEEec
Confidence 9998888754 5544 44554333 34444443321 125554 43 46899999999999999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
|..||||++++|||+| +.|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++++.+..+..+.....+.+
T Consensus 270 s~~e~~~~~~~Ea~a~----G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 345 (360)
T cd04951 270 SAWEGFGLVVAEAMAC----ELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKF 345 (360)
T ss_pred ccccCCChHHHHHHHc----CCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 357999999888888866899999999999999999999877766666655533455889
Q ss_pred CHHHHHHHHHHHH
Q 002285 558 TSQEWAATFVSEL 570 (942)
Q Consensus 558 ~~~~W~~~fl~~L 570 (942)
+++.+++.+++-+
T Consensus 346 s~~~~~~~~~~~y 358 (360)
T cd04951 346 SINSIVQQWLTLY 358 (360)
T ss_pred CHHHHHHHHHHHh
Confidence 9999999887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=213.65 Aligned_cols=270 Identities=17% Similarity=0.120 Sum_probs=190.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCC--hhHhhcCCc--hHHHHH-HhhhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS--SEIHRTLPS--RTELLR-SVLAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~--~e~fr~lp~--r~~il~-~ll~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+||+|+.........+.++ .++++.+.+|..... .......++ ...+.+ .+..+|.|.+.+....+.+..
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~- 159 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDRLLA- 159 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHHHHH-
Confidence 5699999976544433333332 357888888853211 111100001 112222 234578888777654444432
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af 396 (942)
++....++.++|+|+|.+.|.+... ..++++|+++||+.+.||++.+++|+
T Consensus 160 ---------------~~~~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~~li~a~ 210 (367)
T cd05844 160 ---------------LGFPPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPLLLLEAF 210 (367)
T ss_pred ---------------cCCCHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChHHHHHHH
Confidence 1123457889999999988764311 13467899999999999999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
..+.+++|+++ |+++ |+++. .+++++++.+.+.. ..|+ +.+.++.+++..+|+.||++++
T Consensus 211 ~~l~~~~~~~~----l~iv-----G~g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ad~~v~ 270 (367)
T cd05844 211 ARLARRVPEVR----LVII-----GDGPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRRARIFLQ 270 (367)
T ss_pred HHHHHhCCCeE----EEEE-----eCchH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHhCCEEEE
Confidence 99998888754 5555 44443 34455555553221 1254 5678999999999999999999
Q ss_pred CCC------CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHH
Q 002285 477 TSL------RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHL 548 (942)
Q Consensus 477 pSl------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 548 (942)
||. .||||++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.+.++..
T Consensus 271 ps~~~~~~~~E~~~~~~~EA~a~----G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~ 345 (367)
T cd05844 271 PSVTAPSGDAEGLPVVLLEAQAS----GVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGA 345 (367)
T ss_pred CcccCCCCCccCCchHHHHHHHc----CCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHH
Confidence 997 59999999999999 3589999999988877 5789999999999999999999975 456777777
Q ss_pred HHhHHH-HhcCHHHHHHHHH
Q 002285 549 HNFMHV-TTHTSQEWAATFV 567 (942)
Q Consensus 549 ~~~~~v-~~~~~~~W~~~fl 567 (942)
++++++ +.++++.+++.+.
T Consensus 346 ~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 346 AGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHCCHHHHHHHHh
Confidence 888877 5789999888764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=212.05 Aligned_cols=266 Identities=20% Similarity=0.235 Sum_probs=189.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|..+...+..++.+. .++++.+.+|..++.... ... .+..+|.+.+.+......+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~------~~~---~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFR------YNA---IMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHH------HHH---HHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 6799999987765554444433 378899999987653321 112 23458888776654444332 111
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFEK 398 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~~ 398 (942)
+ ....++.++|+|||.+.|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~-----------~~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 G-----------VDPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred C-----------CChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 1 1245788999999998886543221 1222244444 357789999999999999999999999
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pS 478 (942)
+.+.++++ .|+++| +++....+.+++.+.+.+.+.. ..|+|+ +. .+++..+|+.||++++||
T Consensus 210 l~~~~~~~----~l~ivG-----~~~~~~~~~~~~~~~~~~~~~~------~~v~~~-g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPDV----HLLIVG-----DAQGRRFYYAELLELIKRLGLQ------DRVTFV-GH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCCe----EEEEEE-----CCcccchHHHHHHHHHHHcCCc------ceEEEc-CC--cccHHHHHHhCCEEEecC
Confidence 98877764 455554 3333334455555555543321 125554 44 678999999999999999
Q ss_pred -CCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 479 -LRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 479 -l~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
..||||++++||||| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|..++..+++++.++.+++++++.
T Consensus 272 ~~~e~~~~~l~EA~a~----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAM----GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhc----CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 789999999999999 3579999988887777 457999999999999999998888788888888888888875
Q ss_pred hc
Q 002285 556 TH 557 (942)
Q Consensus 556 ~~ 557 (942)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 43
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=228.93 Aligned_cols=280 Identities=15% Similarity=0.080 Sum_probs=181.4
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEE-EeccCCC--ChhHhhcCCchHHHHHHhhhccEEeecC-HHH-HHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGW-FLHTPFP--SSEIHRTLPSRTELLRSVLAADLVGFHT-YDY-ARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~-flH~PfP--~~e~fr~lp~r~~il~~ll~aDlIgF~t-~~~-~~~Fl~~ 316 (942)
++||||+|.+.-..+..+..+.. .+++++ .+|+-.+ ..+.++.. ...+...+..++.+.+.+ ..+ .+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~~~~~~~~~~~~~~--~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRTMPPVDRPDRYRVE--YDIIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCCCccccchhHHHHH--HHHHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 67999999988776666665443 445443 5565211 11111100 011222333333332222 122 222211
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc-CCceEEEeecccccCCHHHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA-GRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
. +.....+|.++|||||.+.|.+. +...+....++.... +.++|++|||+++.||+..+|+|
T Consensus 476 ---~-----------~g~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A 538 (694)
T PRK15179 476 ---W-----------LGVDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA 538 (694)
T ss_pred ---H-----------cCCChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH
Confidence 1 12234689999999999888642 111111122222222 46788999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
|.++++++|+++ |+++ |+|+. ++++++++.+.+.. ..|+| .|.. +++..+|+.||+||
T Consensus 539 ~a~l~~~~p~~~----LvIv-----G~G~~----~~~L~~l~~~lgL~------~~V~f-lG~~--~dv~~ll~aaDv~V 596 (694)
T PRK15179 539 AQRFAASHPKVR----FIMV-----GGGPL----LESVREFAQRLGMG------ERILF-TGLS--RRVGYWLTQFNAFL 596 (694)
T ss_pred HHHHHHHCcCeE----EEEE-----ccCcc----hHHHHHHHHHcCCC------CcEEE-cCCc--chHHHHHHhcCEEE
Confidence 999999999864 5544 45553 34455666555432 12554 5554 57999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCH--HHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~--~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
+||.+||||++++||||| +.|||+|+.+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.++++
T Consensus 597 lpS~~Egfp~vlLEAMA~----G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~ar 671 (694)
T PRK15179 597 LLSRFEGLPNVLIEAQFS----GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKAA 671 (694)
T ss_pred eccccccchHHHHHHHHc----CCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHHH
Confidence 999999999999999999 3578899988988888 678999998885 689999988886533 2233445667
Q ss_pred HHH-HhcCHHHHHHHHHHH
Q 002285 552 MHV-TTHTSQEWAATFVSE 569 (942)
Q Consensus 552 ~~v-~~~~~~~W~~~fl~~ 569 (942)
+++ +.|++...++.+++.
T Consensus 672 ~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 672 DWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHhCCHHHHHHHHHHH
Confidence 766 578988888877654
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-20 Score=210.05 Aligned_cols=277 Identities=18% Similarity=0.179 Sum_probs=192.3
Q ss_pred CCCEEEEcCCchhhHHHHHHhhC---CCCeEEEEeccCCCChhHhhcCCchHH-HHHHhhhccEEeecCHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYN---NNMKVGWFLHTPFPSSEIHRTLPSRTE-LLRSVLAADLVGFHTYDYARHFVSAC 317 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~---p~~~I~~flH~PfP~~e~fr~lp~r~~-il~~ll~aDlIgF~t~~~~~~Fl~~~ 317 (942)
.+|+||+|.+....++.++..+. .+.++.+++|..-.. ....-+.... +...+..+|.|...+......+.+.
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~- 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL- 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh-
Confidence 67999999876545555554322 257888888853111 1111111222 2334457899988887765554321
Q ss_pred HHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHH
Q 002285 318 TRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 318 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
. +...++.++|+|+|...|.+... ...++++ .++++|+++||+.+.||+..+++
T Consensus 161 ---~------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 161 ---F------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ---c------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 1 12346889999999887754321 1122333 46788999999999999999999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
|+.++.++ +++ .|+.+ |+++....+ .+++.+.+.. ..|+|++ . .+++..+|+.||++
T Consensus 218 a~~~l~~~-~~~----~l~i~-----G~g~~~~~~----~~~~~~~~~~------~~v~~~g-~--~~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VPA----RLLLV-----GDGPERSPA----ERLARELGLQ------DDVLFLG-K--QDHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CCc----eEEEE-----cCCcCHHHH----HHHHHHcCCC------ceEEEec-C--cccHHHHHHhcCEE
Confidence 99988665 333 34444 344443333 3444433221 1255544 3 35799999999999
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
|+||..||||++++|||+| +.|+|+|+.+|..+.+ |.+|++++|.|+++++++|..++++ ++++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~----g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMAC----GVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHc----CCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 9999999999999999999 3589999999988877 5789999999999999999999975 4566677777887
Q ss_pred H-HHhcCHHHHHHHHHHHHHH
Q 002285 553 H-VTTHTSQEWAATFVSELND 572 (942)
Q Consensus 553 ~-v~~~~~~~W~~~fl~~L~~ 572 (942)
. ...|+++..++++++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5789999999888876653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=219.74 Aligned_cols=275 Identities=15% Similarity=0.094 Sum_probs=186.5
Q ss_pred cCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh-hHhhcCC-c---hHHHHHHhhhccEEeecCHHHHHHHH
Q 002285 240 YEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS-EIHRTLP-S---RTELLRSVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 240 ~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~-e~fr~lp-~---r~~il~~ll~aDlIgF~t~~~~~~Fl 314 (942)
..++|+|+++-..... +.++ +..+.++++.++|.-.-.. ..-...+ | .+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4578999997655433 3333 5566899999999642100 0000000 1 12223444456777766654433332
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
.... .+.+...+|.++|+|++...+.+. ....+..|++||||.+.||++.+|+
T Consensus 287 ~~~~------------~~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFK------------KYYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhh------------hhcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 2111 122334678899999876543321 0123467999999999999999999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
|+.++.+++|+++ |+++ |+|++. +++++++.+.+.. + .|.| .|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~~----l~i~-----G~G~~~----~~l~~~i~~~~l~----~--~V~f-~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPELT----FDIY-----GEGGEK----QKLQKIINENQAQ----D--YIHL-KGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCeE----EEEE-----ECchhH----HHHHHHHHHcCCC----C--eEEE-cCCC---CHHHHHHhCCEE
Confidence 9999999999854 4444 456543 4455565554321 1 2554 4543 678899999999
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCC-Cccccc--CCceEEECC----CC----HHHHHHHHHHHhCCCHHHH
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVASSIGYALNMPADER 543 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~-G~~~~l--g~~gllVnP----~D----~~~lA~aI~~aL~m~~~er 543 (942)
|+||.+||||+|++||||| +.|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~----G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGS----GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHh----CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 9999999999999999999 3578888876 666766 789999984 33 8999999999994 4467
Q ss_pred HHHHHHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 544 EKRHLHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 544 ~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
.++.+++++.++.++...-++++.+.+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77778889999999998888888766543
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-20 Score=216.29 Aligned_cols=210 Identities=15% Similarity=0.144 Sum_probs=158.6
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
.++.++++|+|.+.|..... ....++++++++||+.+.||+..+|+||++++++.++-..++.|+++|
T Consensus 243 ~~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG 310 (463)
T PLN02949 243 ERIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVG 310 (463)
T ss_pred CCeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEe
Confidence 36788999999876632110 011346789999999999999999999999887543211235577666
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
... .++..++.+++++++.+.+.. + .|.| .+.++.+++.++|+.||++|.||..||||++++|||||
T Consensus 311 ~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~--- 377 (463)
T PLN02949 311 SCR---NKEDEERLQKLKDRAKELGLD----G--DVEF-HKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA--- 377 (463)
T ss_pred CCC---CcccHHHHHHHHHHHHHcCCC----C--cEEE-eCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc---
Confidence 431 112223445666666654322 1 2655 57899999999999999999999999999999999999
Q ss_pred CCceEEEeCCCCccc-cc-----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 497 KKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~-~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
+.|+|+++.+|..+ .+ |.+|++++ |++++|++|.+++++++++++++.+++++.+++|+.+..++++++.+
T Consensus 378 -G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i 454 (463)
T PLN02949 378 -GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAI 454 (463)
T ss_pred -CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 34799999888653 33 35688874 99999999999999888888888888999999999999999998887
Q ss_pred HHhH
Q 002285 571 NDTI 574 (942)
Q Consensus 571 ~~~~ 574 (942)
....
T Consensus 455 ~~l~ 458 (463)
T PLN02949 455 RPIL 458 (463)
T ss_pred HHHH
Confidence 7653
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-20 Score=210.65 Aligned_cols=284 Identities=18% Similarity=0.176 Sum_probs=187.0
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH---------HhhhccEEeecCHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR---------SVLAADLVGFHTYDYAR 311 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~---------~ll~aDlIgF~t~~~~~ 311 (942)
...|+|++|+..... + +++...+ .++++.+|.| .......-.+...+.+ .+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~~-~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFSP-SKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhcC-CcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 478999999865432 2 3333333 7889999954 2211110001111111 12346777665544333
Q ss_pred HHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHH
Q 002285 312 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQ 391 (942)
Q Consensus 312 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~ 391 (942)
.+.. .++ ......+.++|+|||.+.|.+..... ........++.++|+++||+.+.||++.
T Consensus 168 ~~~~----~~~----------~~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFP----------SLAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhc----------ccccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3321 111 00112335899999998886532211 0011112356788999999999999999
Q ss_pred HHHHHHHhHHhC---CCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHh-hccccCCcCcccEEEeCCCCCHHHHHHH
Q 002285 392 KILAFEKFLEEN---PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGR-INGRYGTLTTVPIHHLDRSLDFHALCAL 467 (942)
Q Consensus 392 lL~Af~~ll~~~---P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~-IN~~~~~~~~~pV~~l~~~v~~~el~al 467 (942)
+|+|++++.+++ |+ +.|+.+|.... ..+...++.+++++++.+ .+.. ..|+| .|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f-~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIF-LPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEE-eCCCChHHHHHH
Confidence 999999998876 66 45666653221 111222345566666655 3221 13554 578999999999
Q ss_pred HHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHH
Q 002285 468 YAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREK 545 (942)
Q Consensus 468 y~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 545 (942)
|+.||++++||..||||++++||||| +.|+|+|+.+|..+.+ +.+|+++++ |.+++|++|.++++++ +.+.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~----G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYA----GKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHc----CCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 99999999999999999999999999 3579999988888777 467999987 9999999999999875 46667
Q ss_pred HHHHHhHHH-HhcCHHHHHHHH
Q 002285 546 RHLHNFMHV-TTHTSQEWAATF 566 (942)
Q Consensus 546 r~~~~~~~v-~~~~~~~W~~~f 566 (942)
+.+++++++ ..|+++.++++|
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhhC
Confidence 777788876 668888877653
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-20 Score=213.20 Aligned_cols=285 Identities=14% Similarity=0.114 Sum_probs=195.7
Q ss_pred CCCCEEEEcCCchhhH-H-HHHHhhCCCCeEEEEeccCCCChhHh-hcCC--ch----HHHHHH-hhhccEEeecCHHHH
Q 002285 241 EEGDVVWCHDYHLMFL-P-QCLKEYNNNMKVGWFLHTPFPSSEIH-RTLP--SR----TELLRS-VLAADLVGFHTYDYA 310 (942)
Q Consensus 241 ~~~DiIwvHDyhL~ll-p-~~Lr~~~p~~~I~~flH~PfP~~e~f-r~lp--~r----~~il~~-ll~aDlIgF~t~~~~ 310 (942)
.++|+||+|...+... . .++++ ..+.++++..|--+|..-+- ...+ .. ..+.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 4689999998665432 2 33343 33567777777555422110 0010 00 111122 235788877776655
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccC
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIK 387 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~K 387 (942)
+.+.+ +.....++.++|||||.+.|.+.... ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~----------------~~~~~~~i~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE----------------KGVAAEKVIFFPNWSEVARFQPVADA-----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH----------------cCCCcccEEEECCCcCHhhcCCCCcc-----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 54432 11234578899999999988754211 112345555 3567899999999999
Q ss_pred CHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHH
Q 002285 388 GIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCAL 467 (942)
Q Consensus 388 Gi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~al 467 (942)
|+..+|+|++++ +++|++ .|+++ |+|+.. +++++++.+.+. ..|+| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~~----~l~iv-----G~g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPDL----IFVIC-----GQGGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCCe----EEEEE-----CCChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999877 445664 45555 566643 345555544332 13655 578999999999
Q ss_pred HHHccEEEECCCCCCC----ChhHHHHHhhccCCCceEEEeCCCCc--ccccCCceEEECCCCHHHHHHHHHHHhCCCHH
Q 002285 468 YAITDVALVTSLRDGM----NLVSYEFVACQASKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVASSIGYALNMPAD 541 (942)
Q Consensus 468 y~~ADv~v~pSl~EG~----~Lv~lEamA~~~~~~G~lIlSe~~G~--~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~ 541 (942)
|+.||++|+||..|++ +..++||||| +.|+|+|+.+|. .+.+..+|++++|.|++++|++|.+++++ ++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~----G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~-~~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS----GRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQ-AL 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc----CCCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhC-HH
Confidence 9999999999999994 5557999999 357888887764 34445689999999999999999999876 45
Q ss_pred HHHHHHHHHhHHHH-hcCHHHHHHHHHHHHHHhH
Q 002285 542 EREKRHLHNFMHVT-THTSQEWAATFVSELNDTI 574 (942)
Q Consensus 542 er~~r~~~~~~~v~-~~~~~~W~~~fl~~L~~~~ 574 (942)
++..+.+++++++. +|+++..+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77777788888875 6999999999999888654
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=210.42 Aligned_cols=253 Identities=18% Similarity=0.106 Sum_probs=170.0
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.++|+|++|..+...++.++.+......+.+..|..+...+.+........+.. .+..+|.+...+....+.+...
T Consensus 79 ~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--- 155 (358)
T cd03812 79 NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK--- 155 (358)
T ss_pred CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC---
Confidence 378999999988766777666655555666777876544332221111000111 1223566555444333322210
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af 396 (942)
....++.++|+|||.+.|...... .+. ++.+ .++++|+++||+.+.||++.+++|+
T Consensus 156 --------------~~~~~~~vi~ngvd~~~~~~~~~~---~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~ 214 (358)
T cd03812 156 --------------VKNKKFKVIPNGIDLEKFIFNEEI---RKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIF 214 (358)
T ss_pred --------------CCcccEEEEeccCcHHHcCCCchh---hhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHH
Confidence 124578899999999887653211 111 2222 4678999999999999999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
..+.+++|+++ ++++ |+++....++ +++.+.+.. ..|+++ +. .+++..+|+.||++|+
T Consensus 215 ~~l~~~~~~~~----l~iv-----G~g~~~~~~~----~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~adi~v~ 272 (358)
T cd03812 215 AELLKKNPNAK----LLLV-----GDGELEEEIK----KKVKELGLE------DKVIFL-GV--RNDVPELLQAMDVFLF 272 (358)
T ss_pred HHHHHhCCCeE----EEEE-----eCCchHHHHH----HHHHhcCCC------CcEEEe-cc--cCCHHHHHHhcCEEEe
Confidence 99999988854 5544 4555433333 333333211 135554 43 6789999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCC-ceEEECCCCHHHHHHHHHHHhCCCHHHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVASSIGYALNMPADER 543 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~-~gllVnP~D~~~lA~aI~~aL~m~~~er 543 (942)
||..||||++++||||| +.|+|+|+.+|..+.++. .+++..+.+++++|++|.++++++...+
T Consensus 273 ps~~E~~~~~~lEAma~----G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 273 PSLYEGLPLVLIEAQAS----GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred cccccCCCHHHHHHHHh----CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhh
Confidence 99999999999999999 367999999998888843 4556666778999999999999876443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-20 Score=216.11 Aligned_cols=275 Identities=16% Similarity=0.172 Sum_probs=182.3
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcC-------------CchH--HH-----------H--
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTL-------------PSRT--EL-----------L-- 293 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~l-------------p~r~--~i-----------l-- 293 (942)
.+|+|..|--+.. +-.+.+..+++++++.+|-|.-+.+.+..+ ..+. .+ +
T Consensus 107 ~pDv~i~~~g~~~--~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~ 184 (419)
T cd03806 107 VPDIFIDTMGYPF--TYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYG 184 (419)
T ss_pred CCCEEEEcCCccc--HHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHH
Confidence 4686665532222 223445556889999999554344544221 1100 01 1
Q ss_pred HHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcC
Q 002285 294 RSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG 373 (942)
Q Consensus 294 ~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~ 373 (942)
-.+..||.|...+.....++.+ . .+...++.++|+|+|.+.|.+... ....+
T Consensus 185 ~~~~~aD~ii~~S~~~~~~~~~----~------------~~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~ 236 (419)
T cd03806 185 LAGSFADVVMVNSTWTRNHIRS----L------------WKRNTKPSIVYPPCDVEELLKLPL------------DEKTR 236 (419)
T ss_pred HHhhcCCEEEECCHHHHHHHHH----H------------hCcCCCcEEEcCCCCHHHhccccc------------ccccC
Confidence 1123466666555433333321 1 112236889999999987764311 01235
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHhCCCC-CCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSW-RDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~-~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
+++|+++||+.+.||+..+|+||.++.+..|+. +.++.|+++|.... ++..++.+++++++.+.+.. ..|
T Consensus 237 ~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~------~~V 307 (419)
T cd03806 237 ENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE------DKV 307 (419)
T ss_pred CcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC------CeE
Confidence 679999999999999999999999999887752 12366776663211 11123456677777665432 125
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccc-cc-----CCceEEECCCCHH
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNIT 526 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~-~l-----g~~gllVnP~D~~ 526 (942)
+| .+.++.+++..+|+.||++|+||..||||++++||||| +.|+|+|+.+|..+ .+ |.+|++++ |++
T Consensus 308 ~f-~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~----G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~ 380 (419)
T cd03806 308 EF-VVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA----GLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAE 380 (419)
T ss_pred EE-ecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc----CCcEEEEcCCCCchheeeccCCCCceEEeC--CHH
Confidence 54 57899999999999999999999999999999999999 34688888877654 33 46899974 999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHH
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEW 562 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 562 (942)
++|++|.++++++++++..+.+..+...++|+.+..
T Consensus 381 ~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 381 EYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 999999999999877666654555555577776654
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-19 Score=208.77 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=190.9
Q ss_pred CCCEEEEcCCchhh-HHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHH-hhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMF-LPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS-VLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~l-lp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~-ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
+.|+++.|-++... ...+++++....+++...|......+.+ .+....+.+. +..+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 55677766544433 3345666666566788888632111111 1111112222 34689998888766554432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
.+ .....++.++|+|+|...+.... ...+++.|+++||+.+.||++.+++|+.++
T Consensus 201 ~~-----------~~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RY-----------PAYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HC-----------CCccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 11 22345778999999987664320 113567899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH--ccEEEEC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI--TDVALVT 477 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~--ADv~v~p 477 (942)
.+.+|+.. +.++.+ |+++.... +++++.+.+.. ..|+ +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~ii-----G~g~~~~~----l~~~~~~~~~~------~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHI-----GGGPLEDT----LKELAESKPEN------ISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEE-----eCchHHHH----HHHHHHhcCCC------ceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99988765 666655 34554433 44444322111 1254 5689999999999986 7899999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC-CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP-~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
|..||||++++||||| +.|+|+|+.+|..+.+ |.+|+++++ .|+++++++|.++++ +++++.++.+++++++
T Consensus 318 S~~Eg~p~~llEAma~----G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSF----GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHc----CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 9999999999999999 3589999999988888 457899987 489999999999998 4567778888888887
Q ss_pred -HhcCHHHHHHHHH
Q 002285 555 -TTHTSQEWAATFV 567 (942)
Q Consensus 555 -~~~~~~~W~~~fl 567 (942)
+.|+.+.+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6889999888875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-20 Score=203.43 Aligned_cols=276 Identities=17% Similarity=0.151 Sum_probs=196.0
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh--hHhhc---CCchHHHHHHhhhccEEeecCHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS--EIHRT---LPSRTELLRSVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~--e~fr~---lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
...|+||+|.+..... +....++.+.+|-.+|.. ..+.. ...+..+...+..+|.+.+.+...+..+.+
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 5789999999877655 455788888888655421 11110 011223344555788888877665555543
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHH
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
. . .....++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~-----------~~~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----L-----------GVPPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----h-----------CcCHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 1 113457889999999987764321 11 1111223577899999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
+..+.+.+|++ .|+++|... ..+......+ .+.+. ...+.+.+.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~~----~l~i~G~~~----~~~~~~~~~~----~~~~~-------~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPDP----KLVIVGKRG----WLNEELLARL----RELGL-------GDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCCC----CEEEecCCc----cccHHHHHHH----HHcCC-------CCeEEECCCCChhHHHHHHhhhhhhc
Confidence 99999888754 355554221 1111122222 11111 12334578999999999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
+||..||+|++++|||+| +.|+|+|+.+|..+.++.+|+++++.|.++++++|.+++++ ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~----G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMAC----GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcC----CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 999999999999999999 35788888888777777889999999999999999999874 5677777788888899
Q ss_pred hcCHHHHHHHHH
Q 002285 556 THTSQEWAATFV 567 (942)
Q Consensus 556 ~~~~~~W~~~fl 567 (942)
.++++.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=201.22 Aligned_cols=279 Identities=18% Similarity=0.211 Sum_probs=183.3
Q ss_pred cCCCCEEEEcCCchh-hHHHHHHhhCCCCeEEEEeccCCCChhH-hhcCC---chHHH-HHHhhhccEEeecCHHHHHHH
Q 002285 240 YEEGDVVWCHDYHLM-FLPQCLKEYNNNMKVGWFLHTPFPSSEI-HRTLP---SRTEL-LRSVLAADLVGFHTYDYARHF 313 (942)
Q Consensus 240 ~~~~DiIwvHDyhL~-llp~~Lr~~~p~~~I~~flH~PfP~~e~-fr~lp---~r~~i-l~~ll~aDlIgF~t~~~~~~F 313 (942)
....|+|++|+.... ..+.....+..+.++.++.|..++.... +..+. ..... ...+..+|.|.+.+.......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~ 164 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEI 164 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHH
Confidence 357899999984332 2222222223467888888876654321 00000 00000 111223555655543322211
Q ss_pred HHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHH
Q 002285 314 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIP 390 (942)
Q Consensus 314 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~ 390 (942)
. ..+...++.++|+|+|.+.|..... ... ++.+ .++++|+++||+.+.||++
T Consensus 165 ~-----------------~~~~~~~~~vi~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~i~~~G~~~~~K~~~ 219 (375)
T cd03821 165 R-----------------RLGLKAPIAVIPNGVDIPPFAALPS---RGR-----RRKFPILPDKRIILFLGRLHPKKGLD 219 (375)
T ss_pred H-----------------hhCCcccEEEcCCCcChhccCcchh---hhh-----hhhccCCCCCcEEEEEeCcchhcCHH
Confidence 1 1123457889999999988764321 000 2222 4678999999999999999
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ 470 (942)
.+++|+.++.+++|+++ |+++|.. +. .+ ...++.++.+.+.. ..|+ +.+.++.+++..+|+.
T Consensus 220 ~li~a~~~l~~~~~~~~----l~i~G~~---~~-~~---~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ 281 (375)
T cd03821 220 LLIEAFAKLAERFPDWH----LVIAGPD---EG-GY---RAELKQIAAALGLE------DRVT-FTGMLYGEDKAAALAD 281 (375)
T ss_pred HHHHHHHHhhhhcCCeE----EEEECCC---Cc-ch---HHHHHHHHHhcCcc------ceEE-EcCCCChHHHHHHHhh
Confidence 99999999998888754 5545421 11 12 22233333333211 1244 5789999999999999
Q ss_pred ccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002285 471 TDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH 549 (942)
Q Consensus 471 ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 549 (942)
||++++||..||||++++|||+| +.|+|+|+.+|..+.+ ...|++++ .+.++++++|.++++++ ++++.+.++
T Consensus 282 adv~v~ps~~e~~~~~~~Eama~----G~PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~-~~~~~~~~~ 355 (375)
T cd03821 282 ADLFVLPSHSENFGIVVAEALAC----GTPVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRRALELP-QRLKAMGEN 355 (375)
T ss_pred CCEEEeccccCCCCcHHHHHHhc----CCCEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHHHHhCH-HHHHHHHHH
Confidence 99999999999999999999999 3579999988888877 34556655 45699999999999876 677777788
Q ss_pred HhHH-HHhcCHHHHHHHHH
Q 002285 550 NFMH-VTTHTSQEWAATFV 567 (942)
Q Consensus 550 ~~~~-v~~~~~~~W~~~fl 567 (942)
++++ .++++++..++.++
T Consensus 356 ~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 356 GRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHhcCHHHHHHHhh
Confidence 8887 68888888887765
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-19 Score=200.13 Aligned_cols=267 Identities=18% Similarity=0.160 Sum_probs=190.3
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.+.|+||+|..+...+..++..+....++.+.+|.+.. +.. +....+...+..+|.+...+....+.+.+.
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~---- 148 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRS-PDAIDLDEKLARADFVVAISEYNRQQLIRL---- 148 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----ccc-CchHHHHHHHhhCCEEEECCHHHHHHHHHh----
Confidence 36799999987655555555555557888888886421 111 111233344557999988887666655331
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
. .....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++++.
T Consensus 149 ~-----------~~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~ 205 (355)
T cd03799 149 L-----------GCDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLK 205 (355)
T ss_pred c-----------CCCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHh
Confidence 1 12345788999999998776431 012245678999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|++ .|+.+| +++.. .++.+.+.+.+. .+.+.+.+.++.+++..+|+.||++++||..
T Consensus 206 ~~~~~~----~l~i~G-----~~~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~ 265 (355)
T cd03799 206 DRGIDF----RLDIVG-----DGPLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVT 265 (355)
T ss_pred hcCCCe----EEEEEE-----CCccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEeccee
Confidence 876664 455554 33332 233444444321 1223457889999999999999999999999
Q ss_pred ------CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 481 ------DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 481 ------EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
||||++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ +++..+.+++++
T Consensus 266 ~~~~~~e~~~~~~~Ea~a~----G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~ 340 (355)
T cd03799 266 AADGDREGLPVVLMEAMAM----GLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRA 340 (355)
T ss_pred cCCCCccCccHHHHHHHHc----CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 9999999999999 3578888887777766 45799999999999999999999865 456667777777
Q ss_pred HH-HhcCHHHHHH
Q 002285 553 HV-TTHTSQEWAA 564 (942)
Q Consensus 553 ~v-~~~~~~~W~~ 564 (942)
.+ ..|++...++
T Consensus 341 ~~~~~~s~~~~~~ 353 (355)
T cd03799 341 RVEEEFDIRKQAA 353 (355)
T ss_pred HHHHhcCHHHHhh
Confidence 76 4577766554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.4e-20 Score=208.49 Aligned_cols=279 Identities=19% Similarity=0.141 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCC-ChhHhhcCCc---hHHHHHHhhhccEEe
Q 002285 228 ANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFP-SSEIHRTLPS---RTELLRSVLAADLVG 303 (942)
Q Consensus 228 vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP-~~e~fr~lp~---r~~il~~ll~aDlIg 303 (942)
+-+.|-+.+.. ..+.|+|++|..+.... .+.......++..++|...- ....-...++ .+.++..+..+|.|.
T Consensus 86 l~~~~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 162 (372)
T cd04949 86 LFAFFLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVI 162 (372)
T ss_pred HHHHHHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEE
Confidence 33334444433 46889999998776654 22233334555666674321 1000000111 234445556788888
Q ss_pred ecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecc
Q 002285 304 FHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL 383 (942)
Q Consensus 304 F~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL 383 (942)
+.+....+.+... + +...++.++|+|++...+.+.. .....+..|+++||+
T Consensus 163 ~~s~~~~~~l~~~----~------------~~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl 213 (372)
T cd04949 163 VATEQQKQDLQKQ----F------------GNYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARL 213 (372)
T ss_pred EccHHHHHHHHHH----h------------CCCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEcc
Confidence 8776655554321 1 1122378999999987765421 012356789999999
Q ss_pred cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHH
Q 002285 384 DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463 (942)
Q Consensus 384 d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~e 463 (942)
.+.||+..+|+|+.++.+++|+++ |+++| .++....++ .++.+.+.. + .|.+ .|. .++
T Consensus 214 ~~~K~~~~li~a~~~l~~~~~~~~----l~i~G-----~g~~~~~~~----~~~~~~~~~----~--~v~~-~g~--~~~ 271 (372)
T cd04949 214 APEKQLDQLIKAFAKVVKQVPDAT----LDIYG-----YGDEEEKLK----ELIEELGLE----D--YVFL-KGY--TRD 271 (372)
T ss_pred CcccCHHHHHHHHHHHHHhCCCcE----EEEEE-----eCchHHHHH----HHHHHcCCc----c--eEEE-cCC--CCC
Confidence 999999999999999999999865 44443 333333333 333333221 1 2444 443 467
Q ss_pred HHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC-Cccccc--CCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 464 l~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~-G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
+..+|+.||++|+||..||||++++|||+| +.|+|+++.. |..+.+ |.+|++++|.|++++|++|..+++++
T Consensus 272 ~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~----G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~- 346 (372)
T cd04949 272 LDEVYQKAQLSLLTSQSEGFGLSLMEALSH----GLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP- 346 (372)
T ss_pred HHHHHhhhhEEEecccccccChHHHHHHhC----CCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-
Confidence 999999999999999999999999999999 3578888876 666666 68999999999999999999999865
Q ss_pred HHHHHHHHHHhHHHHhcCHHHHHHH
Q 002285 541 DEREKRHLHNFMHVTTHTSQEWAAT 565 (942)
Q Consensus 541 ~er~~r~~~~~~~v~~~~~~~W~~~ 565 (942)
+.+.++.+++++...+|++..++++
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 5677777888888888888877654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=201.65 Aligned_cols=280 Identities=18% Similarity=0.180 Sum_probs=190.9
Q ss_pred CCCEEEEcCCchhhH---HHHHH--hhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFL---PQCLK--EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 242 ~~DiIwvHDyhL~ll---p~~Lr--~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
.+|+|++|.++-... ...+. .+..+.++.+.+|...+.... .....+.+ -+..+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 679999988332111 11111 123578899999986222111 11112222 234689998886444444332
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHH
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
. ....++.++|+|+|...+..... .+. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~-------~~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES-------LKA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh-------hHh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0 01357889999999876653211 011 1122467899999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
++.+.+++|++ .|+.+|... +..........+++.+.+.. ..|.|+++.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~~----~l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPDV----RLLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCCe----EEEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 99999888775 455554211 11111111101223333221 13666666699999999999999999
Q ss_pred ECCCCC--CCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 476 VTSLRD--GMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 476 ~pSl~E--G~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
+||..| |++++++||||| +.|+|+|+.+| .+.+ +.+|+++++.|+++++++|..+++++ +.+.++.++++
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~----G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGF----GKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHc----CCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 999999999999 35788888888 6666 56899999999999999999999864 46677778889
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 002285 552 MHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 552 ~~v~~~~~~~W~~~fl~~L 570 (942)
+++++++++.+++.+++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998999999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-19 Score=196.17 Aligned_cols=278 Identities=19% Similarity=0.175 Sum_probs=189.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCc-hHHHHHHh-hhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPS-RTELLRSV-LAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~-r~~il~~l-l~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|+++......+........++.+..|..++... ...+. ...+..-+ ..+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 6799999999877766666655467888888888665421 00111 11111111 2355554444332222221
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af 396 (942)
+.....++.++|+|+|...|...... ...+++++ .++++|+++||+.+.||++.+++|+
T Consensus 154 ------------~~~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 ------------IGYPPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred ------------cCCChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 11123577889999999877654221 12233344 3567889999999999999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
..+.+++|++ .|+.+| .++....++.... ...+.. ..|.++ +. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~~----~l~i~G-----~~~~~~~~~~~~~---~~~~~~------~~v~~~-g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPNA----RLLLVG-----DGPDRANLELLAL---KELGLE------DKVILL-GE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCCe----EEEEec-----CCcchhHHHHHHH---HhcCCC------ceEEEc-cc--cccHHHHHHhCCEEEe
Confidence 9999888775 455554 3332222222221 122111 124444 32 4689999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-H
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-T 555 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~ 555 (942)
||..||+|++++|||+| +.|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++ +
T Consensus 275 ps~~e~~~~~~~Ea~a~----g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMAC----GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhc----CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 99999999999999999 357899998888887755799999999999999999999876 56667777777777 4
Q ss_pred hcCHHHHHHHHHHH
Q 002285 556 THTSQEWAATFVSE 569 (942)
Q Consensus 556 ~~~~~~W~~~fl~~ 569 (942)
.+++...+++|++.
T Consensus 350 ~~s~~~~~~~~~~~ 363 (365)
T cd03807 350 NFSIEAMVEAYEEL 363 (365)
T ss_pred hCCHHHHHHHHHHH
Confidence 58999888888764
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-19 Score=197.17 Aligned_cols=280 Identities=16% Similarity=0.148 Sum_probs=195.9
Q ss_pred cCCCCEEEEcC-CchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcC-C-------chHHHH-HHhhhccEEeecCHHH
Q 002285 240 YEEGDVVWCHD-YHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTL-P-------SRTELL-RSVLAADLVGFHTYDY 309 (942)
Q Consensus 240 ~~~~DiIwvHD-yhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~l-p-------~r~~il-~~ll~aDlIgF~t~~~ 309 (942)
..++|+|++|. ..+..++.....+..+.++.+.+|..+|........ . ....+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 35789999998 334444555444455789999999887753221111 1 011111 2334578888888777
Q ss_pred HHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCH
Q 002285 310 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGI 389 (942)
Q Consensus 310 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 389 (942)
.+.+.. +.....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR----------------RGVPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh----------------cCCCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 665541 112345788999999988776542211 01111 122467889999999999999
Q ss_pred HHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 390 PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 390 ~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
..+++|+.++.+. |++ .|+++ |+++....+++. +...+ ...|+++ +.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~~----~l~i~-----G~~~~~~~~~~~----~~~~~-------~~~v~~~-g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PDI----RFLIV-----GDGPEKEELKEL----AKALG-------LDNVTFL-GRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CCe----EEEEe-----CCcccHHHHHHH----HHHcC-------CCcEEEe-CCCChHHHHHHHH
Confidence 9999999999776 664 45544 444443333332 22111 1236655 5899999999999
Q ss_pred HccEEEECCCCCCC-----ChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHH
Q 002285 470 ITDVALVTSLRDGM-----NLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADE 542 (942)
Q Consensus 470 ~ADv~v~pSl~EG~-----~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 542 (942)
.||++++||..|++ +++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++++ +++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~----G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAA----GKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHC----CCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHH
Confidence 99999999999876 7778999999 3579999999988887 3579999999999999999999964 567
Q ss_pred HHHHHHHHhHHHH-hcCHHHHHHHHH
Q 002285 543 REKRHLHNFMHVT-THTSQEWAATFV 567 (942)
Q Consensus 543 r~~r~~~~~~~v~-~~~~~~W~~~fl 567 (942)
+.++.+++++++. .|+++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7777788888887 899999988763
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-19 Score=198.12 Aligned_cols=264 Identities=21% Similarity=0.210 Sum_probs=183.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchH---------HHH-HHhhhccEEeecCHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRT---------ELL-RSVLAADLVGFHTYDYAR 311 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~---------~il-~~ll~aDlIgF~t~~~~~ 311 (942)
.+|+|++|+...+........+..+.++.+.+|.+++. +....+... .+. ..+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 67999999875544333333334478899999988752 222211110 111 223357877776665443
Q ss_pred HHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCC
Q 002285 312 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKG 388 (942)
Q Consensus 312 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KG 388 (942)
.+.. .+...++.++|+|+|...|.+.... . .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----------------YGVKRPIEVIPTGIDLDRFEPVDGD----D----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----------------cCCCCceEEcCCccchhccCccchh----H----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1123458899999999887653211 1 12222 45778999999999999
Q ss_pred HHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHH
Q 002285 389 IPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALY 468 (942)
Q Consensus 389 i~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly 468 (942)
++.+++|++.+.++++++ .|+.+| +++.. .++++++.+.+.. ..|. +.+.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~~----~l~i~G-----~~~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPDV----KLVIVG-----DGPER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEEEe-----CCchH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 999999999998877764 455553 44432 3344444433221 1244 56889999999999
Q ss_pred HHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHH
Q 002285 469 AITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKR 546 (942)
Q Consensus 469 ~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r 546 (942)
+.||++++||..||+|++++|||+| +.|+|+++.++..+.+ +.+|+++++.|. +++++|.++++++. .++++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAA----GLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHc----CCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 9999999999999999999999999 3578888888877777 568999999888 99999999998764 45667
Q ss_pred HHHHhHHHHhcC
Q 002285 547 HLHNFMHVTTHT 558 (942)
Q Consensus 547 ~~~~~~~v~~~~ 558 (942)
.+++++.+.+++
T Consensus 351 ~~~~~~~~~~~~ 362 (374)
T cd03817 351 SKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHHHHHH
Confidence 777888887766
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.7e-19 Score=204.82 Aligned_cols=310 Identities=13% Similarity=0.111 Sum_probs=187.1
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChh-------HhhcCC--------------chHHHHH-Hhhh
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSE-------IHRTLP--------------SRTELLR-SVLA 298 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e-------~fr~lp--------------~r~~il~-~ll~ 298 (942)
.+.|++|.||++......+||++.++++.+|+.|-.-.... ++..++ .+..+-+ ....
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~ 226 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHC 226 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhh
Confidence 47899999999999889999988899999999996432211 111111 0000000 0111
Q ss_pred ccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCCh----hhHHHHHH-----HHH
Q 002285 299 ADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELP----QVQDHINE-----LKE 369 (942)
Q Consensus 299 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~-----lr~ 369 (942)
||.+..-+.-.++ -|. .+.+++..+ |+|||||++.|.+..... ..++++.+ ++.
T Consensus 227 Ad~fttVS~it~~----E~~------------~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~ 289 (590)
T cd03793 227 AHVFTTVSEITAY----EAE------------HLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYG 289 (590)
T ss_pred CCEEEECChHHHH----HHH------------HHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhh
Confidence 2222211110000 011 223333333 999999999987643210 11112222 344
Q ss_pred Hh---cCCceEEE-eecccc-cCCHHHHHHHHHHhHHhCCCC-CCcEEEEEEEcCCCCCh---------hHHHHHHHHHH
Q 002285 370 RF---AGRKVMLG-VDRLDM-IKGIPQKILAFEKFLEENPSW-RDKVVLIQIAVPTRTDV---------PEYQKLTSQVH 434 (942)
Q Consensus 370 ~~---~~~~iIl~-VgRLd~-~KGi~~lL~Af~~ll~~~P~~-~~~vvLvqi~~psrgd~---------~~y~~l~~~l~ 434 (942)
++ .+++++++ +||+++ .||++.+|+|+.++-..-..- .+.-|+..+..|....+ +-.++|++.+.
T Consensus 290 ~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~ 369 (590)
T cd03793 290 HYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVN 369 (590)
T ss_pred hcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHH
Confidence 44 26678888 799999 999999999999886521110 11234444455654331 22345555555
Q ss_pred HHHHhhccc--------------------------------------------------------------cCC-cCccc
Q 002285 435 EIVGRINGR--------------------------------------------------------------YGT-LTTVP 451 (942)
Q Consensus 435 ~lv~~IN~~--------------------------------------------------------------~~~-~~~~p 451 (942)
.+..+|+.+ +.. .+.+.
T Consensus 370 ~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVk 449 (590)
T cd03793 370 SVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVK 449 (590)
T ss_pred HHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEE
Confidence 554444333 100 12234
Q ss_pred EEEeCCCCCH------HHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc----cccC---CceE
Q 002285 452 IHHLDRSLDF------HALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA----QSLG---AGAI 518 (942)
Q Consensus 452 V~~l~~~v~~------~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~----~~lg---~~gl 518 (942)
|+|...+++. .+...+|+.||+||+||++||||++++||||| +.|+|+|+.+|.. +.++ ..|+
T Consensus 450 vif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~----G~PvI~t~~~gf~~~v~E~v~~~~~~gi 525 (590)
T cd03793 450 VVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSITTNLSGFGCFMEEHIEDPESYGI 525 (590)
T ss_pred EEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc----CCCEEEccCcchhhhhHHHhccCCCceE
Confidence 5554433332 35788999999999999999999999999999 3579999998884 3333 3578
Q ss_pred EEC-------CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 519 LVN-------PWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 519 lVn-------P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
+|. +.++++++++|.++++++..++........+....+++.+.+..+++.-.
T Consensus 526 ~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 526 YIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred EEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 887 56788999999999976543333322333466777888888877766543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=207.41 Aligned_cols=188 Identities=14% Similarity=0.070 Sum_probs=129.3
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecc--cccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL--DMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL--d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
.++.++|||||++.+....... ..+ ...++++|++|+|+ ++.||+..+|+|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 5788999999975432211100 001 12467889999994 4789999999999876 233 45665
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
+| +++... . ..|.+++...+..++..+|+.||+||+||.+||||+|++|||||
T Consensus 277 vG-----~g~~~~------~---------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FG-----KFSPFT------A---------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred Ec-----CCCccc------c---------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 54 332110 0 02444443346789999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HHhcCHHHHHHHHHHHHH
Q 002285 495 ASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH-VTTHTSQEWAATFVSELN 571 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~L~ 571 (942)
+.|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... ........+++. ...|+.+..++++++-..
T Consensus 330 ---G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 ---GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred ---CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4689999999988877 45899999999999998643222100 000112335555 466999999988876543
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.4e-19 Score=193.29 Aligned_cols=282 Identities=21% Similarity=0.178 Sum_probs=197.9
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhh----cCCchHHHHHHhhhccEEeecCHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR----TLPSRTELLRSVLAADLVGFHTYDYARHFVSAC 317 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr----~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~ 317 (942)
+.|+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+.+.+......+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 67999999998877665 4445568899999999876432110 00011112233345788777776555544321
Q ss_pred HHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHH
Q 002285 318 TRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 318 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
+.....++.++|+|+|...+.... .... .......+++.|+++||+.+.||+..+++|+.
T Consensus 163 --------------~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 163 --------------GGVPPEKITVIPNGVDTERFRPAP-----RAAR-RRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred --------------CCCCCCcEEEecCcccccccCccc-----hHHH-hhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 111125789999999998775421 0000 00011245678999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
.+.+++|++ .|+.+| +++....++ +++.+.+.. ..|. +.+.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~~----~l~i~G-----~~~~~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPDV----RLVIVG-----DGPLREELE----ALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCCe----EEEEEe-----CcHHHHHHH----HHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEEEec
Confidence 998887764 455554 344333333 333222211 1244 46789999999999999999999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh-HHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF-MHV 554 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~-~~v 554 (942)
|..||+|++++|||+| +.|+|+++.+|..+.+ +.+|+++++.|+++++++|.++++++ +.++++.++++ ...
T Consensus 283 ~~~~~~~~~~~Ea~~~----g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAA----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHc----CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999 3578888988888877 56899999999999999999999865 45556666666 556
Q ss_pred HhcCHHHHHHHHHHHH
Q 002285 555 TTHTSQEWAATFVSEL 570 (942)
Q Consensus 555 ~~~~~~~W~~~fl~~L 570 (942)
+.++++.+++.+++.+
T Consensus 358 ~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 358 ERFSWDRVAARTEEVY 373 (374)
T ss_pred HhcCHHHHHHHHHHhh
Confidence 8899999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.1e-19 Score=197.33 Aligned_cols=272 Identities=23% Similarity=0.222 Sum_probs=189.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch----HHHHHH-hhhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR----TELLRS-VLAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r----~~il~~-ll~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+|++|..........+..+..++++.+++|..||..-........ ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 679999997654433333322334678888899877632111111111 122222 23577777777655442211
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceEEEeecccccCCHHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
....++.++|+|+|.+.|.+..... ..++++ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 1124678899999998886542211 111222 45788999999999999999999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
|+.++.++ |+++ |+.+| +++....++ ..+ ..|.| .+.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~~----l~i~G-----~~~~~~~~~--------~~~--------~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPVR----LVIVG-----DGPARARLE--------ARY--------PNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCce----EEEEe-----CCchHHHHh--------ccC--------CcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99999877 7654 55443 344322222 111 13554 4668999999999999999
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
++||..||+|++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|.++++++|.++++++ +++.++...+++
T Consensus 271 l~~s~~e~~~~~~lEa~a~----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMAS----GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHc----CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999999 3578888888888777 46899999999999999999999764 567777788888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 002285 553 HVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 553 ~v~~~~~~~W~~~fl~~L 570 (942)
.+..++++.+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 889999999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-19 Score=193.76 Aligned_cols=282 Identities=22% Similarity=0.203 Sum_probs=194.3
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.+.|+|++|......+...+..+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 478999999655444333333333457888888887653221111 1122233344568999888876666554310
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
....++.++|+|+|...|.+.... ....+ ....++++|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADRA-----EARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcchH-----HHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 124578899999999887653211 00111 11246788999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+++|++ .|+.+ |.++....+ .+++...+. .+.+.+.+.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~~----~l~i~-----g~~~~~~~~----~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPDV----HLVIV-----GDGPLREAL----EALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCCe----EEEEE-----cCCcchHHH----HHHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 877764 45544 334433333 333333221 1223356889999999999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH-HhHHHHhc
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH-NFMHVTTH 557 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~-~~~~v~~~ 557 (942)
||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+ .....+.+
T Consensus 289 ~~~~~~~~Ea~~~----G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMAC----GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhc----CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 9999999999999 3578999888887777 4567999999999999999999988654 33333 34455778
Q ss_pred CHHHHHHHHHHHHHH
Q 002285 558 TSQEWAATFVSELND 572 (942)
Q Consensus 558 ~~~~W~~~fl~~L~~ 572 (942)
+++.+++.+.+.+.+
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 889988888876653
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=201.75 Aligned_cols=264 Identities=14% Similarity=0.120 Sum_probs=175.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhh-CCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEY-NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~-~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+||+|+.....+..++++. ....++..+.|..++....+. ...+..+|.+...+....+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 6799999998776666666553 333455566676543321111 11235678877666544443321
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeeccc--ccCCHHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLD--MIKGIPQKILAFEK 398 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd--~~KGi~~lL~Af~~ 398 (942)
.+ ....++.++|||||.+.+.... + ...++++|+++||+. +.||+..+++|+.+
T Consensus 151 ~~-----------~~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RG-----------ISAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cC-----------CCHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 11 1234688999999976553211 1 113467899999996 46999999999987
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCC--CHHHHHHHHHHccEEEE
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL--DFHALCALYAITDVALV 476 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v--~~~el~aly~~ADv~v~ 476 (942)
+. ++ +.|+++ |+|++.+ ++++++.+.+.. ..|+| .|.+ +.+++..+|+.||++|+
T Consensus 207 ~~---~~----~~l~iv-----G~g~~~~----~l~~~~~~~~l~------~~v~f-~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---GE----WQLHII-----GDGSDFE----KCKAYSRELGIE------QRIIW-HGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---CC----eEEEEE-----eCCccHH----HHHHHHHHcCCC------CeEEE-ecccCCcHHHHHHHHhcCcEEEE
Confidence 63 23 456655 4565443 345555544321 12554 4544 45899999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeC-CCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe-~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
||..||||++++||||| +.|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+.. | ......+.
T Consensus 264 ~s~~Egf~~~~lEAma~----G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~-~--~~~~~~~~ 336 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSY----GIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK-Y--QHDAIPNS 336 (359)
T ss_pred CCcccCcChHHHHHHHc----CCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc-C--CHHHHHHH
Confidence 99999999999999999 35799998 78877777 6789999999999999999999987742 1 11222334
Q ss_pred HHhcCHHHHHHHHHHHHHH
Q 002285 554 VTTHTSQEWAATFVSELND 572 (942)
Q Consensus 554 v~~~~~~~W~~~fl~~L~~ 572 (942)
+.++..+...+++...+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 337 IERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 4555556666666555543
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.5e-19 Score=193.60 Aligned_cols=263 Identities=17% Similarity=0.114 Sum_probs=181.2
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.++|+|++|+.+...+...+.... .++.+..|..++..... ..+.......+..+|.+.+.+......+
T Consensus 82 ~~~d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~------- 150 (348)
T cd03820 82 NKPDVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKR--LRRLLLRRLLYRRADAVVVLTEEDRALY------- 150 (348)
T ss_pred cCCCEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhh--hHHHHHHHHHHhcCCEEEEeCHHHHHHh-------
Confidence 478999999987222222222221 47777888766532211 0011112233446788877775543100
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
......++.++|+|++...+... ...+++.++++||+.+.||++.+++|++++.
T Consensus 151 -----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 151 -----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred -----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 11124578899999998765432 1245778999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|+++ |+++| +++.... +.+++.+.+.. ..|++ .+. .+++..+|+.||++++||..
T Consensus 205 ~~~~~~~----l~i~G-----~~~~~~~----~~~~~~~~~~~------~~v~~-~g~--~~~~~~~~~~ad~~i~ps~~ 262 (348)
T cd03820 205 KKHPDWK----LRIVG-----DGPEREA----LEALIKELGLE------DRVIL-LGF--TKNIEEYYAKASIFVLTSRF 262 (348)
T ss_pred hcCCCeE----EEEEe-----CCCCHHH----HHHHHHHcCCC------CeEEE-cCC--cchHHHHHHhCCEEEeCccc
Confidence 8888754 55443 3343333 33344443321 12444 443 68999999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
||||++++|||+| +.|+|+|+..|..+.+ +.+|+++++.|+++++++|.+++++ ++.+..+.++++..++.+
T Consensus 263 e~~~~~~~Ea~a~----G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~~~~ 337 (348)
T cd03820 263 EGFPMVLLEAMAF----GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESAERF 337 (348)
T ss_pred cccCHHHHHHHHc----CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHh
Confidence 9999999999999 3578888876555544 3489999999999999999999985 456666667778889999
Q ss_pred CHHHHHHHHH
Q 002285 558 TSQEWAATFV 567 (942)
Q Consensus 558 ~~~~W~~~fl 567 (942)
+++.++++|.
T Consensus 338 ~~~~~~~~~~ 347 (348)
T cd03820 338 SIENIIKQWE 347 (348)
T ss_pred CHHHHHHHhc
Confidence 9999888774
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=197.68 Aligned_cols=193 Identities=18% Similarity=0.240 Sum_probs=124.3
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 479999999999975 44699999999999987 699999999999999999988874 4789999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC--------CCeeeeeecce-------EEEEEeccchH-H---
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT--------PRSHFEVRETS-------LVWNYKYADLE-F--- 740 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~--------~Gs~iE~K~~s-------l~~hyr~ad~e-~--- 740 (942)
|+.+...++.- +.....+ .+.+.++++...... .+.+....... ..+.+...+.+ +
T Consensus 67 Ga~I~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (272)
T PRK15126 67 GTRVHSLEGEL--LHRQDLP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAH 141 (272)
T ss_pred CcEEEcCCCCE--EEeecCC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcccc
Confidence 99998432221 1101122 234444444322110 01111000000 00000000000 0
Q ss_pred ---------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC
Q 002285 741 ---------GRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF 810 (942)
Q Consensus 741 ---------~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~ 810 (942)
......++...+ ...+. ..+.+. .+..++||.|+++|||.||++|++++| ++.+.+++|||
T Consensus 142 ~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afGD- 212 (272)
T PRK15126 142 GVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFGD- 212 (272)
T ss_pred CceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEecC-
Confidence 001112233333 22121 234544 456799999999999999999999998 67899999999
Q ss_pred CCCCHHHHHhcCc
Q 002285 811 LQKDEDIYTFFEP 823 (942)
Q Consensus 811 d~nDEdMF~~~~~ 823 (942)
+.||.+||+.++.
T Consensus 213 ~~NDi~Ml~~ag~ 225 (272)
T PRK15126 213 AMNDREMLGSVGR 225 (272)
T ss_pred CHHHHHHHHHcCC
Confidence 9999999999965
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-19 Score=205.28 Aligned_cols=265 Identities=11% Similarity=0.053 Sum_probs=165.9
Q ss_pred CCCEEEEcCCchhhH---HHHHHhhCCCCeEEEEeccCCCChhHhhcCC--chHHHHHHhhhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFL---PQCLKEYNNNMKVGWFLHTPFPSSEIHRTLP--SRTELLRSVLAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~ll---p~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp--~r~~il~~ll~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+||+|+.-.+.. ...++++. .. ++.++|+.|+. +++... .....+...+ ..|++.|.
T Consensus 116 ~pDVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~---------~~~~~r~~-- 180 (462)
T PLN02846 116 EADIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYI---------NSWVVDIY-- 180 (462)
T ss_pred CCCEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHH---------HHHHHHHh--
Confidence 579999999765544 33444443 34 77789998753 322211 1111111111 11222221
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cC---CceEEEeecccccCCHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AG---RKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~iIl~VgRLd~~KGi~~l 392 (942)
|+.++..+... ..+. ..+.+.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+
T Consensus 181 ~d~vi~pS~~~--~~l~---~~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~L 246 (462)
T PLN02846 181 CHKVIRLSAAT--QDYP---RSIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKEL 246 (462)
T ss_pred cCEEEccCHHH--HHHh---hCEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHH
Confidence 23222222100 0010 123334689999988754221 11122 22 3468999999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
|+||.++.+..|+++ ++++ |+||+.++|+ +++.+++. .++++.+..+.+ .+|+.+|
T Consensus 247 i~a~~~l~~~~~~~~--l~iv-------GdGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~~---~~~~~~D 302 (462)
T PLN02846 247 LKLLHKHQKELSGLE--VDLY-------GSGEDSDEVK----AAAEKLEL--------DVRVYPGRDHAD---PLFHDYK 302 (462)
T ss_pred HHHHHHHHhhCCCeE--EEEE-------CCCccHHHHH----HHHHhcCC--------cEEEECCCCCHH---HHHHhCC
Confidence 999999988888854 4444 7888755554 44444332 133456655444 6899999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHN 550 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 550 (942)
|||+||..||||+|++||||| +.|||+++..| .+.+ +.+|+++ .|.++++++|..+|..+++++.. +.
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~----G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a 372 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAM----GKIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ 372 (462)
T ss_pred EEEECCCcccchHHHHHHHHc----CCcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH
Confidence 999999999999999999999 34678887776 5666 7788888 48999999999999865433321 11
Q ss_pred hHHHHhcCHHHHHHHHHHHHHH
Q 002285 551 FMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 551 ~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
...++++.-+++|+..+.-
T Consensus 373 ---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 373 ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred ---HHhCCHHHHHHHHHHHhcc
Confidence 2478888888888776543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=196.69 Aligned_cols=195 Identities=17% Similarity=0.226 Sum_probs=130.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEee
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAE 678 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liae 678 (942)
..|+|++|+||||++. +..++++++++|++|.+ .|..|+|+|||++..+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 45599999999999987 6999999999999999999999854 69999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhc--CCCeeeeeecceEEE-----------E--E----eccc--
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTER--TPRSHFEVRETSLVW-----------N--Y----KYAD-- 737 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r--~~Gs~iE~K~~sl~~-----------h--y----r~ad-- 737 (942)
||+++...++. +.....+ .+.+..+++..... ....+.......... + + ...+
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999976332 2211223 44555555554222 111111111000000 0 0 0000
Q ss_pred h-------HHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcE-EEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 738 L-------EFGRLQARDILQHLWSGPISNASVDVVQGGRS-VEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 738 ~-------e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~-vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
. +.......++...+ ...+....+.+..+... +||.|+|+|||.|++.++++++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 0 00011122333333 22222234556666544 9999999999999999999998 56789999999
Q ss_pred CCCCCHHHHHhcCcC
Q 002285 810 FLQKDEDIYTFFEPE 824 (942)
Q Consensus 810 ~d~nDEdMF~~~~~~ 824 (942)
+.||.+||++++..
T Consensus 214 -~~ND~~Ml~~ag~g 227 (264)
T COG0561 214 -STNDIEMLEVAGLG 227 (264)
T ss_pred -ccccHHHHHhcCee
Confidence 99999999999874
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-18 Score=192.56 Aligned_cols=196 Identities=17% Similarity=0.196 Sum_probs=144.3
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||.+.|.+.... ..+..+.+...+++..+|++|||+++.||++.+|+|++++.+++|++..++.|+.++
T Consensus 117 ~I~~GVD~~~f~p~~~~--~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG---- 190 (335)
T PHA01633 117 PVFHGINFKIVENAEKL--VPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVIS---- 190 (335)
T ss_pred eeeCCCChhhcCccchh--hHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEc----
Confidence 36789999998764211 111222222223466789999999999999999999999999999876556676552
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLD--RSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~--~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+ . ++.++ + ..+ .|+|++ +.++.+++.++|+.||+||+||..||||++++||||| +
T Consensus 191 -~-~-------~~~~l----~----l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----G 247 (335)
T PHA01633 191 -H-K-------QFTQL----E----VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----G 247 (335)
T ss_pred -H-H-------HHHHc----C----CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc----C
Confidence 1 1 11111 1 111 266654 6778899999999999999999999999999999999 3
Q ss_pred ceEEEeCCCCcccccC------------------C--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcC
Q 002285 499 GVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHT 558 (942)
Q Consensus 499 G~lIlSe~~G~~~~lg------------------~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 558 (942)
.|+|+|+.+|..+..| . .|++|++.|++++|++|..++.+.. +.++..++++..++++
T Consensus 248 ~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~ 325 (335)
T PHA01633 248 TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYD 325 (335)
T ss_pred CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcC
Confidence 5788888887766543 1 2567889999999999999987753 3344556778899999
Q ss_pred HHHHHHHHH
Q 002285 559 SQEWAATFV 567 (942)
Q Consensus 559 ~~~W~~~fl 567 (942)
++.-+++|+
T Consensus 326 ~~~~~~~~~ 334 (335)
T PHA01633 326 IRNLYTRFL 334 (335)
T ss_pred HHHHHHHhh
Confidence 998888775
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-18 Score=190.56 Aligned_cols=258 Identities=17% Similarity=0.179 Sum_probs=175.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|.+..+..+.+...+...+++.+++|-.++... ....+. ...|.+...+....+.|..
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~---~~~d~ii~~s~~~~~~~~~------ 160 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFK---KGGDAVIAPSRFLLDRYVA------ 160 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhc---cCCCEEEEeCHHHHHHHHH------
Confidence 6799999987554443332222345889999997553211 111111 1127777766555444432
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLE 401 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~ 401 (942)
+.....++.++|+|+|...+..... ....++++|+++||+.+.||+..+++|+..+.+
T Consensus 161 ----------~~~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 161 ----------NGLFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred ----------cCCCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1111357899999999987754211 012456789999999999999999999999876
Q ss_pred hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002285 402 ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL-R 480 (942)
Q Consensus 402 ~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl-~ 480 (942)
++ +.|+++| .++......... ..+ ..|. +.+.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G-----~~~~~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVG-----NGLELEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEc-----CchhhhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 45 4455554 333221111111 111 1244 5688899999999999999999998 7
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcC
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHT 558 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 558 (942)
||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++. ++.++++.+++++.+..
T Consensus 274 e~~~~~~~Ea~a~----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAA----GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHC----CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH--
Confidence 9999999999999 3578999988888777 4579999999999999999999984 45666666666666543
Q ss_pred HHHHHHHHHHH
Q 002285 559 SQEWAATFVSE 569 (942)
Q Consensus 559 ~~~W~~~fl~~ 569 (942)
..+++++++.
T Consensus 347 -~~~~~~~~~~ 356 (359)
T cd03823 347 -EDQAEEYLKL 356 (359)
T ss_pred -HHHHHHHHHH
Confidence 5555555543
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-19 Score=207.42 Aligned_cols=263 Identities=12% Similarity=0.083 Sum_probs=163.7
Q ss_pred CCCEEEEcCCchhhHH---HHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHH--
Q 002285 242 EGDVVWCHDYHLMFLP---QCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSA-- 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp---~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~-- 316 (942)
++||||+|..-.+... ....++. + +++..+||.|+. +++.... ..+..++ ..++++|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhh
Confidence 7799999986544333 2233333 2 577888999985 3332211 1111110 1123334332
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc---CCceEEEeecccccCCHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA---GRKVMLGVDRLDMIKGIPQKI 393 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd~~KGi~~lL 393 (942)
|..++.++.... .+. . .+....+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~-~vI~nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--K-SVICNVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--c-cceeecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 454444331100 111 1 11112269999999864321 011 1221 234589999999999999999
Q ss_pred HHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccE
Q 002285 394 LAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDV 473 (942)
Q Consensus 394 ~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv 473 (942)
+|+..+.++.|+++ |+++ |+||...+ +++++.+++. .|+|+++ .++...+|+.+||
T Consensus 566 eAla~L~~~~pnvr----LvIV-----GDGP~ree----Le~la~eLgL--------~V~FLG~---~dd~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGFN----LDVF-----GNGEDAHE----VQRAAKRLDL--------NLNFLKG---RDHADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCeE----EEEE-----cCCccHHH----HHHHHHHcCC--------EEEecCC---CCCHHHHHHhCCE
Confidence 99999988888754 4444 67886544 4444444332 2555543 3445589999999
Q ss_pred EEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 474 ALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 474 ~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
||+||.+||||+|++||||| +.|||+++..|.. .+ |.+|++. .|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~----GlPVVATd~pG~e-~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAM----GKFVVCADHPSNE-FFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHc----CCCEEEecCCCCc-eEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 99999999999999999999 3578888887743 34 4566654 799999999999999775 22211 1
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 002285 552 MHVTTHTSQEWAATFVSE 569 (942)
Q Consensus 552 ~~v~~~~~~~W~~~fl~~ 569 (942)
....++++.-+++|++.
T Consensus 690 -a~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEY 706 (794)
T ss_pred -HHhhCCHHHHHHHHHHh
Confidence 13367777777777653
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.7e-19 Score=188.03 Aligned_cols=182 Identities=14% Similarity=0.239 Sum_probs=121.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 489999999999975 34689999999999996 799999999999999998877774 4799999
Q ss_pred ceEEEeC--CCceeecccCCCChhHHHHHHHHHHHHHhcCCCe--eeeee--c--ceEEEEEeccchHHhHHHHHHHHHH
Q 002285 680 GMFLRLT--TGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRS--HFEVR--E--TSLVWNYKYADLEFGRLQARDILQH 751 (942)
Q Consensus 680 G~~ir~~--~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs--~iE~K--~--~sl~~hyr~ad~e~~~~qa~el~~~ 751 (942)
|+.+... +..+.. ... +.+..+++.+.+..+.. .+... . ......++..+ ..+..+.++.
T Consensus 68 Ga~i~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~ 135 (230)
T PRK01158 68 GGVISVGFDGKRIFL---GDI-----EECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----VEEVRELLEE 135 (230)
T ss_pred CeEEEEcCCCCEEEE---cch-----HHHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----HHHHHHHHHH
Confidence 9998753 222111 111 12233333332222211 11100 0 00011111111 1112222222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 752 LWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 752 L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+ ...+.+..+...+|+.|+++|||.|++.++++++ ++++.+++||| +.||++||+.++.
T Consensus 136 ~------~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 136 L------GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred c------CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 2 1235566666789999999999999999999998 56889999999 9999999999865
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-18 Score=195.78 Aligned_cols=194 Identities=19% Similarity=0.192 Sum_probs=139.7
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHH----HHHHHhHHhCCCCCCcEE
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKI----LAFEKFLEENPSWRDKVV 411 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL----~Af~~ll~~~P~~~~~vv 411 (942)
..++.++|+|||.+.|.+...... . ...++++|+++||+++.||++.++ +++..+.+.+|+++
T Consensus 195 ~~~v~vipngvd~~~f~~~~~~~~------~---~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~---- 261 (397)
T TIGR03087 195 AGRITAFPNGVDADFFSPDRDYPN------P---YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE---- 261 (397)
T ss_pred CCCeEEeecccchhhcCCCccccC------C---CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----
Confidence 357889999999998865321100 0 013567899999999999999888 56666777788865
Q ss_pred EEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CCCCChhHHHH
Q 002285 412 LIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL-RDGMNLVSYEF 490 (942)
Q Consensus 412 Lvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl-~EG~~Lv~lEa 490 (942)
|+++ |+++. .+++++.. . ..|+| .|.++ ++..+|+.||++|+||. .||++++++||
T Consensus 262 l~iv-----G~g~~-----~~~~~l~~----~------~~V~~-~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEA 318 (397)
T TIGR03087 262 FYIV-----GAKPS-----PAVRALAA----L------PGVTV-TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEA 318 (397)
T ss_pred EEEE-----CCCCh-----HHHHHhcc----C------CCeEE-eeecC--CHHHHHHhCCEEEecccccCCcccHHHHH
Confidence 4444 44543 12333321 1 12554 56675 68999999999999997 59999999999
Q ss_pred HhhccCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHH
Q 002285 491 VACQASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVS 568 (942)
Q Consensus 491 mA~~~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~ 568 (942)
||| +.|+|+|..++..... +.+|+++. .|++++|++|.+++++ ++.++++.+++++++ +.|+++..++++.+
T Consensus 319 ma~----G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~ 392 (397)
T TIGR03087 319 MAM----AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDA 392 (397)
T ss_pred HHc----CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999 3567777754321111 34688886 8999999999999975 456777778888887 57999999998876
Q ss_pred HHH
Q 002285 569 ELN 571 (942)
Q Consensus 569 ~L~ 571 (942)
-+.
T Consensus 393 ~l~ 395 (397)
T TIGR03087 393 LLE 395 (397)
T ss_pred Hhc
Confidence 553
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.3e-19 Score=191.64 Aligned_cols=187 Identities=17% Similarity=0.181 Sum_probs=125.8
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc---eEEe
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM---WLAA 677 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~lia 677 (942)
..++||+|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+.+++..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4789999999999975 34578999999999997 6999999999999999999888754 6999
Q ss_pred ecceEEEeCCC-cee---ecccCCCChhHHHHHHHHHHHHHhcCCCeee--ee-----------------------ecce
Q 002285 678 ENGMFLRLTTG-EWM---TTMPENLNMDWVDSVKHVFEYFTERTPRSHF--EV-----------------------RETS 728 (942)
Q Consensus 678 ehG~~ir~~~~-~w~---~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i--E~-----------------------K~~s 728 (942)
+||+.+....+ ... .......+ .+.+.++++..... .+..+ .. ....
T Consensus 71 ~NGa~I~~~~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFPRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEAS 146 (271)
T ss_pred eCCCEEEecCcccCCCCceEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccC
Confidence 99999985322 100 01101122 34455555543321 11110 00 0000
Q ss_pred EEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCC---CCceEE
Q 002285 729 LVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKT---PIDYVL 805 (942)
Q Consensus 729 l~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~---~~d~vl 805 (942)
..+.+.. +++ +..++.+.+ .. ..+.++.+..++||.|+++|||.|+++|+++++ + +.+.++
T Consensus 147 ~~~~~~~-~~~----~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~vi 210 (271)
T PRK03669 147 VTLIWRD-SDE----RMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTTL 210 (271)
T ss_pred ceeEecC-CHH----HHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceEE
Confidence 1111110 111 122334444 22 145666666789999999999999999999998 5 689999
Q ss_pred EEeCCCCCCHHHHHhcCc
Q 002285 806 CIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 806 ~iGD~d~nDEdMF~~~~~ 823 (942)
+||| +.||.+||++++.
T Consensus 211 afGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 211 GLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEcC-CHHHHHHHHhCCE
Confidence 9999 9999999999865
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=201.01 Aligned_cols=268 Identities=10% Similarity=-0.020 Sum_probs=173.4
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCc-------hHHHHHHh-hhccEEeecCHHHH
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPS-------RTELLRSV-LAADLVGFHTYDYA 310 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~-------r~~il~~l-l~aDlIgF~t~~~~ 310 (942)
+++|+|++|..... .+..++..+....++++.+|.-+++..-. ..+. ...+.+.+ ..||.|...+....
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~ 172 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMK 172 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHH
Confidence 46899999985432 22233323334688998888654321000 0100 01111111 23666665554433
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHH---------------H--hcC
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKE---------------R--FAG 373 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~~ 373 (942)
+.+. .++....+|.++|+| +.+.|.+..... ....+.+ . .++
T Consensus 173 ~~l~----------------~~~~~~~ki~vI~Ng-~~~~f~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (415)
T cd03816 173 EDLQ----------------QFNNWKIRATVLYDR-PPEQFRPLPLEE----KHELFLKLAKTFLTRELRIGAVQLSEER 231 (415)
T ss_pred HHHH----------------hhhccCCCeeecCCC-CHHHceeCcHHH----HHHHHHhccccccccccccccceecCCC
Confidence 3221 112235688999999 556676542111 0111110 0 123
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHh------CCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCc
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEE------NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTL 447 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~------~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~ 447 (942)
.++++++||+.+.||+..+|+|+..+.+. +|+ +.|+++ |+|+.. +++++++.+.+.
T Consensus 232 ~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~iv-----G~G~~~----~~l~~~~~~~~l----- 293 (415)
T cd03816 232 PALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIIT-----GKGPLK----EKYLERIKELKL----- 293 (415)
T ss_pred ceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEE-----ecCccH----HHHHHHHHHcCC-----
Confidence 46788999999999999999999998763 355 456655 456543 344455544332
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECC---CCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC
Q 002285 448 TTVPIHHLDRSLDFHALCALYAITDVALVTS---LRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP 522 (942)
Q Consensus 448 ~~~pV~~l~~~v~~~el~aly~~ADv~v~pS---l~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP 522 (942)
..++++.+.++.+++..+|++||++|+++ ..+|||++++||||| +.|+|+|+.+|..+.+ |.+|++|+
T Consensus 294 --~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~----G~PVI~s~~~~~~eiv~~~~~G~lv~- 366 (415)
T cd03816 294 --KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC----GLPVCALDFKCIDELVKHGENGLVFG- 366 (415)
T ss_pred --CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc----CCCEEEeCCCCHHHHhcCCCCEEEEC-
Confidence 24677788899999999999999999743 348899999999999 3578999988888877 67899994
Q ss_pred CCHHHHHHHHHHHhCCC--HHHHHHHHHHHhHHHHh
Q 002285 523 WNITEVASSIGYALNMP--ADEREKRHLHNFMHVTT 556 (942)
Q Consensus 523 ~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v~~ 556 (942)
|++++|++|..+++++ +++++++.++++++.+.
T Consensus 367 -d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 367 -DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred -CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999973 66777777777777643
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.5e-18 Score=187.09 Aligned_cols=273 Identities=20% Similarity=0.161 Sum_probs=188.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCc--hHHHHH-HhhhccEEeecCHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPS--RTELLR-SVLAADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~--r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
.+|+|++|..+..++..++++.....++.+.+|...+... ...... ...+.+ .+..+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 6799999987777677776665556777777776532211 000000 011111 2235788888887666655431
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEK 398 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ 398 (942)
+. ......+.+.|+|+|.+.+...... ...+++.|+++||+.+.||+..+++|++.
T Consensus 157 ---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GI---------IKKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cC---------CCcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 00 0013467788999999877543210 12467899999999999999999999999
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pS 478 (942)
+.+.+|++ .|+.+|.. +........ ++...+.. ..|.|++ . .+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~i~G~~-----~~~~~~~~~---~~~~~~~~------~~v~~~g-~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPNV----RLLLVGDG-----DEENPAAIL---EIEKLGLE------GRVEFLG-F--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCCe----EEEEEcCC-----CcchhhHHH---HHHhcCCc------ceEEEee-c--cccHHHHHHhccEEEecC
Confidence 98877774 45555432 211111111 12222211 1355544 3 678999999999999999
Q ss_pred CCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HH
Q 002285 479 LRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH-VT 555 (942)
Q Consensus 479 l~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-v~ 555 (942)
..||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++..+++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~----G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAM----GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHc----CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 999999999999999 3579999999988877 57899999999999999999988754 4566666777777 68
Q ss_pred hcCHHHHHHHHH
Q 002285 556 THTSQEWAATFV 567 (942)
Q Consensus 556 ~~~~~~W~~~fl 567 (942)
.++...+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 899998888775
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-18 Score=192.51 Aligned_cols=214 Identities=11% Similarity=0.055 Sum_probs=151.4
Q ss_pred hccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceE
Q 002285 298 AADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVM 377 (942)
Q Consensus 298 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 377 (942)
.+|.|...+......+.+ .+. ....++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~----------~~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGL----------KIPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCC----------CCCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 478887777655444432 110 01247889999999988864311 01244566
Q ss_pred EEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCC
Q 002285 378 LGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR 457 (942)
Q Consensus 378 l~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~ 457 (942)
++++|+.+.||++.+|+|++++.+++|++ .|+++| +++.. . ++. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG-----~~~~~--~--~l~----~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKS-----SNMLD--P--RLF----GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEe-----Ccccc--h--hhc----ccc------c------eec
Confidence 67789999999999999999998887764 455554 22211 1 110 011 1 134
Q ss_pred CCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC-------------
Q 002285 458 SLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP------------- 522 (942)
Q Consensus 458 ~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP------------- 522 (942)
.++.+++..+|+.||+||+||..||||++++||||| +.|+|+|+.+|..+.+ |.+|++|++
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~----G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL----GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 578899999999999999999999999999999999 3579999988878877 556666642
Q ss_pred ------CCHHHHHHHHHHHhCCC-HHHHHHHH-HHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 523 ------WNITEVASSIGYALNMP-ADEREKRH-LHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 523 ------~D~~~lA~aI~~aL~m~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
.|.++++++|.++|.++ ++++++++ .......++|+++..++++++.+++
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 27788999999999864 23444444 4556678999999999999887753
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=189.46 Aligned_cols=191 Identities=17% Similarity=0.241 Sum_probs=122.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc-----eEE
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM-----WLA 676 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~li 676 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.+..+++ ++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I 67 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCI 67 (270)
T ss_pred eEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEE
Confidence 589999999999985 45689999999999987 6999999999999999988887753 589
Q ss_pred eecceEEEe-CCCc--eeecccCCCChhHHHHHHHHHHHHHhcC--------CCeeeeeecce-----------EEEEEe
Q 002285 677 AENGMFLRL-TTGE--WMTTMPENLNMDWVDSVKHVFEYFTERT--------PRSHFEVRETS-----------LVWNYK 734 (942)
Q Consensus 677 aehG~~ir~-~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~r~--------~Gs~iE~K~~s-----------l~~hyr 734 (942)
+.||+.+.. .++. +... .+. +.+..+++...+.. .+.+...+... +...+.
T Consensus 68 ~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (270)
T PRK10513 68 TNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFR 140 (270)
T ss_pred EcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCcccc
Confidence 999999984 2232 2221 222 23333333322110 11121111100 000000
Q ss_pred cc---chH--H------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCC
Q 002285 735 YA---DLE--F------G-RLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPI 801 (942)
Q Consensus 735 ~a---d~e--~------~-~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 801 (942)
.. ++. . . .....++...+ ...+. ..+.++ .+..++||.|+|+|||.|+++|+++++ ++.
T Consensus 141 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~ 212 (270)
T PRK10513 141 EVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKP 212 (270)
T ss_pred chhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCH
Confidence 00 000 0 0 00112222223 11111 234443 467799999999999999999999998 678
Q ss_pred ceEEEEeCCCCCCHHHHHhcCc
Q 002285 802 DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 802 d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.+++||| +.||.+||+.++.
T Consensus 213 ~~v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 213 EEVMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred HHEEEECC-chhhHHHHHhCCc
Confidence 99999999 9999999999865
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-17 Score=186.09 Aligned_cols=265 Identities=20% Similarity=0.198 Sum_probs=177.1
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHH-HHHhhhccEEeecCHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTEL-LRSVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.++|+||+|....+.....+... .+.+..+++|........+. .....+ ...+..+|.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 47899999986544332222222 46677888886432211111 011112 22445688887777655543321
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
+ .....++.++|+|+|...|.+.... .........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~------------~~~~~~~~~i~~gi~~~~~~~~~~~------~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L------------RRFRDKVRVIPLGLDPARYPRPDAL------EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h------------cCCccceEEecCCCChhhcCCcchh------hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 1112578899999999877643211 001111124678999999999999999999999987
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
. + +.|+.+| +++... ++.+++.+.+.. ..|+ +.+.++.+++..+|+.||++++||.
T Consensus 217 ~----~----~~l~i~G-----~g~~~~----~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P----D----APLVIVG-----EGPLEA----ELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c----C----cEEEEEe-----CChhHH----HHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 2 4555553 444333 344444333211 1255 4689999999999999999999997
Q ss_pred --CCCCChhHHHHHhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 480 --RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 480 --~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
.||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++++ +++++++.+++++++
T Consensus 273 ~~~e~~g~~~~Ea~~~----g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAF----GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHc----CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
Confidence 59999999999999 3578888888877765 5689999999999999999999985 456777777788776
Q ss_pred Hh-cCH
Q 002285 555 TT-HTS 559 (942)
Q Consensus 555 ~~-~~~ 559 (942)
.+ +++
T Consensus 348 ~~~~s~ 353 (357)
T cd03795 348 EEEFTA 353 (357)
T ss_pred HHhcch
Confidence 43 443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=185.90 Aligned_cols=243 Identities=17% Similarity=0.119 Sum_probs=162.5
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.+.|+||+|+....++ + .+..+.++.+++|..+..... .........+.+.+-+......+
T Consensus 86 ~~~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~------- 146 (335)
T cd03802 86 GDFDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPW------- 146 (335)
T ss_pred CCCCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhc-------
Confidence 3689999999877665 2 234567888899987643211 12223333444333222211110
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
... .++.++|+|||.+.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 147 ------------~~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 147 ------------PPL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred ------------ccc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 001 568899999999888642 1245689999999999999999999764
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL- 479 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl- 479 (942)
+++ .|+++| +++....+...+.+... ++ ..|+ +.|.++.+++..+|+.||++|+||.
T Consensus 196 ---~~~----~l~i~G-----~~~~~~~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~ 253 (335)
T cd03802 196 ---AGI----PLKLAG-----PVSDPDYFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILW 253 (335)
T ss_pred ---cCC----eEEEEe-----CCCCHHHHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCcc
Confidence 243 455554 33222222222222211 11 1255 4678999999999999999999998
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH-HHHh
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM-HVTT 556 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~-~v~~ 556 (942)
.||||++++||||| +.|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++..+.+. +++ ..++
T Consensus 254 ~E~~~~~~lEAma~----G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~-------~~~~~~~~ 320 (335)
T cd03802 254 EEPFGLVMIEAMAC----GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAA-------CRRRAERR 320 (335)
T ss_pred cCCcchHHHHHHhc----CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHH-------HHHHHHHh
Confidence 59999999999999 3589999999988877 458999987 999999999997654321 112 2367
Q ss_pred cCHHHHHHHHHH
Q 002285 557 HTSQEWAATFVS 568 (942)
Q Consensus 557 ~~~~~W~~~fl~ 568 (942)
|+++.-++++++
T Consensus 321 ~s~~~~~~~~~~ 332 (335)
T cd03802 321 FSAARMVDDYLA 332 (335)
T ss_pred CCHHHHHHHHHH
Confidence 788877777765
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=186.85 Aligned_cols=193 Identities=18% Similarity=0.268 Sum_probs=125.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|+.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 479999999999986 34689999999999997 799999999999999999888774 4789999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCe--eeeeecceEE---------------EEEeccchH---
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRS--HFEVRETSLV---------------WNYKYADLE--- 739 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs--~iE~K~~sl~---------------~hyr~ad~e--- 739 (942)
|+.+...++.. +.....+ .+.+.++++...+ .++. .+...+..+. ..+...+.+
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHD-NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcc-cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 99998533332 1111122 3445555544321 1111 1111000000 000000000
Q ss_pred ---H--------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEE
Q 002285 740 ---F--------GRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCI 807 (942)
Q Consensus 740 ---~--------~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 807 (942)
. ......++.+.+ ...+. ..+.+ ..+..++||.|+|+|||.||++|++++| ++.+.+++|
T Consensus 141 ~~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viaf 212 (266)
T PRK10976 141 PDGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAF 212 (266)
T ss_pred cCCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEE
Confidence 0 000111222223 21111 23444 3456799999999999999999999998 678999999
Q ss_pred eCCCCCCHHHHHhcCcC
Q 002285 808 GHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 808 GD~d~nDEdMF~~~~~~ 824 (942)
|| +.||.+||++++..
T Consensus 213 GD-~~NDi~Ml~~ag~~ 228 (266)
T PRK10976 213 GD-GMNDAEMLSMAGKG 228 (266)
T ss_pred cC-CcccHHHHHHcCCC
Confidence 99 99999999999874
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-17 Score=186.87 Aligned_cols=249 Identities=20% Similarity=0.176 Sum_probs=166.1
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCC----h-hHhhcCCc-------------hHHHHHHhhhccEE
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS----S-EIHRTLPS-------------RTELLRSVLAADLV 302 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~----~-e~fr~lp~-------------r~~il~~ll~aDlI 302 (942)
.+.|+|+++...... .++ ..+..+..+++|.|.+- . ......+. +......+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 478999887642221 122 34567778888986311 0 01111110 00011223456766
Q ss_pred eecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeec
Q 002285 303 GFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDR 382 (942)
Q Consensus 303 gF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgR 382 (942)
...+....+.+.+ . .+ .+..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~------------~~--~~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----Y------------YG--RDATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----H------------hC--CCcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 6666554444422 1 11 1346789999998775421 23457999999
Q ss_pred ccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHH
Q 002285 383 LDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFH 462 (942)
Q Consensus 383 Ld~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~ 462 (942)
+.+.||++.+|+|++++ | ++ ++++ |++++.+.+++ ... ..|.| .+.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-~~--l~iv-------G~g~~~~~l~~-------~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-KR--LVVI-------GDGPELDRLRA-------KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-Cc--EEEE-------ECChhHHHHHh-------hcC--------CCEEE-ecCCCHH
Confidence 99999999999999875 3 33 4444 45554433332 111 13554 5789999
Q ss_pred HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 463 el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
++.++|+.||++++||. ||||++++||||| +.|+|+|..+|..+.+ +.+|++++|.|++++|++|..+++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~----G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMAS----GTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHc----CCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 9999999999999 3689999998888877 568999999999999999999998764
Q ss_pred HHHHHHHHHHhHHHHhcCHHHHHHHH
Q 002285 541 DEREKRHLHNFMHVTTHTSQEWAATF 566 (942)
Q Consensus 541 ~er~~r~~~~~~~v~~~~~~~W~~~f 566 (942)
. ..+.+.+.+..++.+++.+++
T Consensus 329 ~----~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 329 F----DPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred c----CHHHHHHHHHhcCHHHHHHHh
Confidence 1 223344555667777766654
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-17 Score=184.26 Aligned_cols=268 Identities=16% Similarity=0.044 Sum_probs=174.5
Q ss_pred CCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHH-----HHhhhccEEeecCHHHHHHHH
Q 002285 242 EGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELL-----RSVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 242 ~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il-----~~ll~aDlIgF~t~~~~~~Fl 314 (942)
..|+++||..... .+..+++.. +.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~~--~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRLK--GKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHhc--CCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3456666654433 333334332 67888888863111111110 001111 123457888776654444332
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHH--hcCCceEEEeecccccCCHHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKER--FAGRKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~--~~~~~iIl~VgRLd~~KGi~~l 392 (942)
. .. |... .++|+|+|...+.+. . ..++. +.+++.|+++||+.+.||+..+
T Consensus 160 ~----~~------------~~~~--~~i~ngv~~~~~~~~---~-------~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KY------------GRDS--TYIPYGADHVVSSEE---D-------EILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hc------------CCCC--eeeCCCcChhhcchh---h-------hhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 11 1111 789999998766430 0 11122 2355678899999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|+.++.. + +.|+++|. ++....+.+++.+. .+. . ..|+ +.+.++.+++..+|+.||
T Consensus 212 i~a~~~l~~---~----~~l~ivG~-----~~~~~~~~~~~~~~---~~~----~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS---G----KKLVIVGN-----ADHNTPYGKLLKEK---AAA----D--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc---C----ceEEEEcC-----CCCcchHHHHHHHH---hCC----C--CcEE-EccccChHHHHHHHHhCC
Confidence 999988743 3 45665643 22222233333321 111 1 1255 468899999999999999
Q ss_pred EEEECCCC-CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 473 VALVTSLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 473 v~v~pSl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
++++||.. ||||++++||||| +.|+|+|+.+|..+.++.+|.++++.|. ++++|.++++++ +.+....++++
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~----G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAY----GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHc----CCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 9999999999999 3689999988888777778999998876 999999999876 45666667777
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 002285 552 MHVT-THTSQEWAATFVSEL 570 (942)
Q Consensus 552 ~~v~-~~~~~~W~~~fl~~L 570 (942)
+.+. .++++.-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 489888888887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-17 Score=180.36 Aligned_cols=246 Identities=20% Similarity=0.156 Sum_probs=164.4
Q ss_pred CCCEEEEcCC-chhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDY-HLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDy-hL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
..|+|++|++ ...++..+ ..+. +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALL-AARL-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHH-Hhhc-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 6799999998 33333333 3333 78899999988753211 111111112334456788877766555444331
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
. .....++.++|+|+|.+.+......+ . .+ ....++.+|+++||+.+.||+..+++|+..+.
T Consensus 154 ~-----------~~~~~~~~vi~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 L-----------GIPPDKIEVIYNPIDIEEIRALAEEP-----L-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred h-----------cCCccccEEecCCcChhhcCcccchh-----h-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 1 11245788999999998776542210 0 00 11246788999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+++++++ |+.+| +++....++ +++.+.+.. ..|.+ .+.+ +++..+|+.||++++||..
T Consensus 216 ~~~~~~~----l~i~G-----~~~~~~~~~----~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPDAR----LVILG-----DGPLREELE----ALAKELGLA------DRVHF-LGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCCce----EEEEc-----CCccHHHHH----HHHHhcCCC------ccEEE-eccc--CCHHHHHHhCCEEEeCccc
Confidence 8777654 55443 344333333 444443321 12444 4443 5688999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHH---HHHHHHHhCC
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV---ASSIGYALNM 538 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~l---A~aI~~aL~m 538 (942)
||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|.+++ +++|..++..
T Consensus 274 e~~~~~~~Ea~~~----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMAL----GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHh----CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 9999999999999 3578899999888877 578999999999999 4555555543
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-18 Score=178.49 Aligned_cols=181 Identities=18% Similarity=0.236 Sum_probs=118.7
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGMF 682 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~~ 682 (942)
|++|+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 589999999975 34689999999999987 699999999999999988877764 5799999999
Q ss_pred EEeCCC---ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCC
Q 002285 683 LRLTTG---EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISN 759 (942)
Q Consensus 683 ir~~~~---~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~ 759 (942)
+...++ .|.... ...|................-.+ .. ...+.......+++ .+.++..++ .
T Consensus 66 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~----~~~~~~~~~-----~- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAYL----EEEWFLDIVIAKTFPFSRLKVQY-PR-RASLVKMRYGIDVD----TVREIIKEL-----G- 129 (225)
T ss_pred EEeCCCCceEEeccc----CHHHHHHHHHhcccchhhhcccc-cc-ccceEEEeecCCHH----HHHHHHHhc-----C-
Confidence 985432 233222 22333221111100000000000 00 11111111112222 223333333 1
Q ss_pred CCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 760 ASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 760 ~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+.+..+...+||.|++++||.|+++++++++ ++.+.+++||| +.||.+||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123334556799999999999999999999998 56789999999 9999999999975
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=176.47 Aligned_cols=185 Identities=18% Similarity=0.307 Sum_probs=125.9
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGMF 682 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~~ 682 (942)
||+|+||||++. +..++++++++|++|.+ .|+.++|+|||++..+.+++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 689999999985 34589999999999998 699999999999999999999884 5999999999
Q ss_pred EEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecc-----------------------------------
Q 002285 683 LRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRET----------------------------------- 727 (942)
Q Consensus 683 ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~----------------------------------- 727 (942)
+....++.... ...+ .+.+..+++......-...+...+.
T Consensus 66 i~~~~~~~l~~--~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKILYE--KPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEEEEE--ESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeecccccchh--hhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94333332111 1122 3455555555443221111111100
Q ss_pred --eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEE
Q 002285 728 --SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVL 805 (942)
Q Consensus 728 --sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 805 (942)
.+.++ .++ .+...+.+++ .......-..+..+..++||.|+++|||.|++.++++++ ++.+.++
T Consensus 141 i~ki~~~---~~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFF---PDP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEE---SCH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeecc---ccc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 00100 011 1122333333 211111113345679999999999999999999999998 5689999
Q ss_pred EEeCCCCCCHHHHHhcCcC
Q 002285 806 CIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 806 ~iGD~d~nDEdMF~~~~~~ 824 (942)
+||| +.||.+||+.++..
T Consensus 207 ~~GD-~~ND~~Ml~~~~~~ 224 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGYS 224 (254)
T ss_dssp EEES-SGGGHHHHHHSSEE
T ss_pred Eeec-ccccHhHHhhcCeE
Confidence 9999 99999999999874
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=195.36 Aligned_cols=198 Identities=14% Similarity=0.159 Sum_probs=126.4
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
++.|+. +.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++
T Consensus 301 ~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 301 LRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred hhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 344444 6789999999999985 45799999999999997 6999999999999999988876632
Q ss_pred -----------eEEeecceEEEeCCCc--eeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEE---------E
Q 002285 674 -----------WLAAENGMFLRLTTGE--WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV---------W 731 (942)
Q Consensus 674 -----------~liaehG~~ir~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~---------~ 731 (942)
++|+.||+.+...++. +... .+ .+.+.++++...+..-...+...+..+. +
T Consensus 365 ~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~ 437 (580)
T PLN02887 365 AGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSL 437 (580)
T ss_pred ccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHH
Confidence 3567799999843332 2222 22 3445555554322111111111110000 0
Q ss_pred EE--ec-----c-ch-HHh--------------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHH
Q 002285 732 NY--KY-----A-DL-EFG--------------RLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRI 787 (942)
Q Consensus 732 hy--r~-----a-d~-e~~--------------~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~L 787 (942)
++ .. . +. ++. .....++...+ ...+. ..+.+ ..+..++||.|+|+|||.||+.|
T Consensus 438 ~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~L 515 (580)
T PLN02887 438 HTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKML 515 (580)
T ss_pred HHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 00 00 0 00 000 00011122222 21111 13444 34677999999999999999999
Q ss_pred HHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 788 LGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 788 l~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++++| ++.+.+++||| +.||.+||++++.
T Consensus 516 ~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 516 LNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 99998 67899999999 9999999999965
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-16 Score=179.09 Aligned_cols=197 Identities=23% Similarity=0.312 Sum_probs=145.3
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccc--cCCHHHHHHHHHHhHHh-CCCCCCc
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDM--IKGIPQKILAFEKFLEE-NPSWRDK 409 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~--~KGi~~lL~Af~~ll~~-~P~~~~~ 409 (942)
..++.++|+|||.+.|.+... ...++.+ .++++++++++... .||+..+++|++.+.++ .|+
T Consensus 158 ~~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~---- 225 (365)
T cd03825 158 GIPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD---- 225 (365)
T ss_pred CCceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----
Confidence 357889999999988754311 1123333 34566666667654 89999999999988765 444
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCCCCChhHH
Q 002285 410 VVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLD-FHALCALYAITDVALVTSLRDGMNLVSY 488 (942)
Q Consensus 410 vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~-~~el~aly~~ADv~v~pSl~EG~~Lv~l 488 (942)
+.++.+| +++.... . .++ ..|. +.+.++ .+++..+|+.||++++||..||||++++
T Consensus 226 ~~~~i~G-----~~~~~~~------~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFG-----ASDPEIP------P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAI 282 (365)
T ss_pred eEEEEeC-----CCchhhh------c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHH
Confidence 5566553 3321100 0 111 1244 456677 8899999999999999999999999999
Q ss_pred HHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHH
Q 002285 489 EFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAAT 565 (942)
Q Consensus 489 EamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 565 (942)
|||+| +.|+|+|+.+|..+.+ +.+|+++++.|.++++++|.++++.+ +++.++.+++++++ ..++++.+++.
T Consensus 283 Eam~~----g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~ 357 (365)
T cd03825 283 EALAC----GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKR 357 (365)
T ss_pred HHHhc----CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999 3578999988888877 45799999999999999999999754 45666667777777 56899999998
Q ss_pred HHHHHHH
Q 002285 566 FVSELND 572 (942)
Q Consensus 566 fl~~L~~ 572 (942)
+++-+++
T Consensus 358 ~~~~y~~ 364 (365)
T cd03825 358 YLSLYEE 364 (365)
T ss_pred HHHHHhh
Confidence 8876543
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=177.87 Aligned_cols=191 Identities=17% Similarity=0.236 Sum_probs=122.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+...+..++ .++|+.|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 589999999999975 44689999999999997 699999999999999999888874 4699999
Q ss_pred ceEEEe-CCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceE------------EE----------EEecc
Q 002285 680 GMFLRL-TTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSL------------VW----------NYKYA 736 (942)
Q Consensus 680 G~~ir~-~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl------------~~----------hyr~a 736 (942)
|+.+.. .++.. +.....+ .+.+.++++...+..-...+...+..+ .| .+...
T Consensus 68 Ga~i~d~~~~~~--l~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (272)
T PRK10530 68 GTYLYDYQAKKV--LEADPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQV 142 (272)
T ss_pred CcEEEecCCCEE--EEecCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEc
Confidence 999984 23321 1101122 344555555443221111111000000 00 00000
Q ss_pred ch--HH----h-----------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCC
Q 002285 737 DL--EF----G-----------RLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLK 798 (942)
Q Consensus 737 d~--e~----~-----------~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~ 798 (942)
+. +. . .....++.+.+ ....++.+ ..+..++|+.+++++||.|++++++.++
T Consensus 143 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g------ 212 (272)
T PRK10530 143 DSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG------ 212 (272)
T ss_pred ccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 00 00 0 00011222222 11123333 2345689999999999999999999998
Q ss_pred CCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 799 TPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 799 ~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++.+.+++||| +.||.+||+.++.
T Consensus 213 i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 56899999999 9999999999864
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=183.24 Aligned_cols=240 Identities=13% Similarity=0.014 Sum_probs=156.6
Q ss_pred CCCCEEEEcCCchhh--HHHHHHhhCCCCeEEEEeccCCCChhHhhc--C--Cc----hHHHHHHh-hhccEEeecCHHH
Q 002285 241 EEGDVVWCHDYHLMF--LPQCLKEYNNNMKVGWFLHTPFPSSEIHRT--L--PS----RTELLRSV-LAADLVGFHTYDY 309 (942)
Q Consensus 241 ~~~DiIwvHDyhL~l--lp~~Lr~~~p~~~I~~flH~PfP~~e~fr~--l--p~----r~~il~~l-l~aDlIgF~t~~~ 309 (942)
.++|+||+|..+.+. ++..+-.+..+.++.+.+|..+. ..+.. . +. ...+.+.+ ..+|.|...+...
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~ 176 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGY--TLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAM 176 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccH--HHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 477999999876532 23333333346788888887531 11100 0 00 01112222 2367777766554
Q ss_pred HHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCH
Q 002285 310 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGI 389 (942)
Q Consensus 310 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 389 (942)
.+...+ ..|. ++.++|+|+ .+.|.+.... ..+ ..+...+|+++||+.+.||+
T Consensus 177 ~~~l~~----------------~~g~--~i~vi~n~~-~~~f~~~~~~-------~~~--~~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 177 QHELDQ----------------NWGI--RATVLYDQP-PEFFRPASLE-------IRL--RPNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHH----------------hcCC--CeEEECCCC-HHHcCcCCch-------hcc--cCCCcEEEEEeCceeccCCH
Confidence 443321 0111 267889984 5667543211 011 11344678899999999999
Q ss_pred HHHHHHHHHhHH-----------------hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 390 PQKILAFEKFLE-----------------ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 390 ~~lL~Af~~ll~-----------------~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
..+++|+..+.. .+|+ +.|+++ |+|++.+++ ++++.+.+. ..+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~iv-----G~G~~~~~l----~~~~~~~~l-------~~v 288 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIIT-----GKGPQKAMY----EEKISRLNL-------RHV 288 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEE-----eCCCCHHHH----HHHHHHcCC-------Cce
Confidence 999999988742 3465 446555 577764444 444444332 236
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECC--C-CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHH
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTS--L-RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITE 527 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pS--l-~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~ 527 (942)
+|+.+.++.+++..+|+.||++|+|+ . .||||++++||||| +.|+|+|..+|..+.+ |.+|++|+ |+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~----G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~ 362 (371)
T PLN02275 289 AFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC----GLPVCAVSYSCIGELVKDGKNGLLFS--SSSE 362 (371)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC----CCCEEEecCCChHHHccCCCCeEEEC--CHHH
Confidence 77777889999999999999999863 2 48999999999999 3578899988888877 67899997 6999
Q ss_pred HHHHHHHHh
Q 002285 528 VASSIGYAL 536 (942)
Q Consensus 528 lA~aI~~aL 536 (942)
+|++|.++|
T Consensus 363 la~~i~~l~ 371 (371)
T PLN02275 363 LADQLLELL 371 (371)
T ss_pred HHHHHHHhC
Confidence 999998875
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.8e-17 Score=175.10 Aligned_cols=198 Identities=17% Similarity=0.227 Sum_probs=122.7
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc---C-ceE
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY---N-MWL 675 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~-l~l 675 (942)
.+.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 45799999999999986 45789999999999987 69999999999999999888743 2 367
Q ss_pred EeecceEEEeCCCce-eecccCCCChhHHHHHHHHHHHHH-----hcCCCeeeeeecceEEEEEe--ccch----HHh--
Q 002285 676 AAENGMFLRLTTGEW-MTTMPENLNMDWVDSVKHVFEYFT-----ERTPRSHFEVRETSLVWNYK--YADL----EFG-- 741 (942)
Q Consensus 676 iaehG~~ir~~~~~w-~~~~~~~~~~~w~~~v~~il~~~~-----~r~~Gs~iE~K~~sl~~hyr--~ad~----e~~-- 741 (942)
|+.||+.++..++.+ ...++...+.++...+.+.++.+. ....+.+++.......+.+. .... ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 999999998644332 221111123333344444433220 01122333322111111110 0000 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC---CCCC
Q 002285 742 ---RLQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF---LQKD 814 (942)
Q Consensus 742 ---~~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~nD 814 (942)
.....++.+.+ ...+....+.... |..++||.|+|+|||.||+.|+++ .+.+++|||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 00112333444 2222222333343 357999999999999999999987 3679999992 3799
Q ss_pred HHHHHhcCc
Q 002285 815 EDIYTFFEP 823 (942)
Q Consensus 815 EdMF~~~~~ 823 (942)
.+||++++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997644
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=178.81 Aligned_cols=191 Identities=16% Similarity=0.233 Sum_probs=128.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC----ceEEe
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN----MWLAA 677 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~lia 677 (942)
+.+|++|+||||++..+ .+..++|++.++|+++.+ .|+.++++|||+...+.++...++ -.+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 46899999999998421 134578999999999986 688999999999999998865442 24899
Q ss_pred ecceEEEeCCC-----ceeecccCCCChhHH-HHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHH
Q 002285 678 ENGMFLRLTTG-----EWMTTMPENLNMDWV-DSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQH 751 (942)
Q Consensus 678 ehG~~ir~~~~-----~w~~~~~~~~~~~w~-~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~ 751 (942)
+||+.+..++. .|.... ...|. +.+..+...+...++....+.+...+.+.+.... ......++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999985431 122111 12233 2344444433333444444455566666653211 11112223333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 752 LWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 752 L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
+ ... ...+.+ ..+..++||.|++++||.|++++++.++ ++.+.+++||| +.||.+||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123443 5678899999999999999999999988 56899999999 99999999984
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.7e-17 Score=175.32 Aligned_cols=184 Identities=16% Similarity=0.188 Sum_probs=124.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc----eEEeec
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM----WLAAEN 679 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~liaeh 679 (942)
||++|+||||++. +..+++.. ++|+ +. +.|+.++|+|||++..+.+++..+++ ++|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999974 22455555 7776 44 46999999999999999999988743 399999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHH-----HHHHHHHHhcCCCeeeeeecc--eEEEEEeccchHHhHHHHHHHHHHH
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSV-----KHVFEYFTERTPRSHFEVRET--SLVWNYKYADLEFGRLQARDILQHL 752 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v-----~~il~~~~~r~~Gs~iE~K~~--sl~~hyr~ad~e~~~~qa~el~~~L 752 (942)
|+.+..... +. .+..|...+ ...+..+....+|..++.+.. .+.++|+..+ +.. ....++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDP-EGE-PILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECc-ccc-hHHHHHHHHH
Confidence 999864321 10 011121111 111234445577777776652 4677887532 211 1122333333
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 753 WSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 753 ~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.... ..+.+ ..+..++|+.|+++|||.|++.|+++++ ++.+.+++||| +.||++||+.++.
T Consensus 135 -~~~~--~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~~ 196 (236)
T TIGR02471 135 -RQQS--QAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLTL 196 (236)
T ss_pred -Hhcc--CCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCCc
Confidence 2211 23343 4566789999999999999999999998 56789999999 9999999998865
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.6e-17 Score=175.90 Aligned_cols=191 Identities=18% Similarity=0.288 Sum_probs=124.5
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGM 681 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~ 681 (942)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.+.+..++ .++|+.||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999985 34689999999999997 599999999999999999988874 479999999
Q ss_pred EEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEE-------------Eec----cchHH----
Q 002285 682 FLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWN-------------YKY----ADLEF---- 740 (942)
Q Consensus 682 ~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~h-------------yr~----ad~e~---- 740 (942)
.+...+++. +.....+ .+.+.++++.+....-...+...+.....+ +.. .+.+.
T Consensus 66 ~i~~~~~~~--i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGEI--LYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCCE--EeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 998543321 1111122 344555555443321111111111000000 000 00000
Q ss_pred ---------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 741 ---------GRLQARDILQHLWSG-PISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 741 ---------~~~qa~el~~~L~~~-~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
......++...+ .. .. ...+.+ ..+..++||.|+++|||.||+.+++.++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 001112233333 21 11 123554 4567899999999999999999999988 56899999999
Q ss_pred CCCCCHHHHHhcCc
Q 002285 810 FLQKDEDIYTFFEP 823 (942)
Q Consensus 810 ~d~nDEdMF~~~~~ 823 (942)
+.||.+||+.++.
T Consensus 213 -~~nD~~m~~~~~~ 225 (256)
T TIGR00099 213 -GMNDIEMLEAAGY 225 (256)
T ss_pred -cHHhHHHHHhCCc
Confidence 9999999999975
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-16 Score=168.64 Aligned_cols=188 Identities=20% Similarity=0.267 Sum_probs=117.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc-C---ceEEe
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY-N---MWLAA 677 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~---l~lia 677 (942)
++++|+|+||||++. +..++++++++|++|.+ . +.++++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 456779999999975 45689999999999995 4 999999999999998888774 1 47899
Q ss_pred ecceEEEeCCCceeec--ccCCCChhHHHHHHHHHHHHHh---c-----CCCeeeeeecceEEEEE--eccchH----Hh
Q 002285 678 ENGMFLRLTTGEWMTT--MPENLNMDWVDSVKHVFEYFTE---R-----TPRSHFEVRETSLVWNY--KYADLE----FG 741 (942)
Q Consensus 678 ehG~~ir~~~~~w~~~--~~~~~~~~w~~~v~~il~~~~~---r-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~ 741 (942)
+||+++...+ ++... .+...+. +.+.++++.... . ..+.+++..+..+.+.+ .+.... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~ 146 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFE 146 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHH
Confidence 9999998543 33221 1011222 334444433211 1 12344443322222221 111101 00
Q ss_pred H-----HHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC---CC
Q 002285 742 R-----LQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF---LQ 812 (942)
Q Consensus 742 ~-----~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~ 812 (942)
. ....++.+.+ ...+....+.+. .|..++||.++|+|||.||+.|+ . .+.+++|||. +.
T Consensus 147 ~i~~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ 214 (245)
T PLN02423 147 KYDKVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGG 214 (245)
T ss_pred hhCccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCC
Confidence 0 1112333334 222232234333 35689999999999999999998 2 6899999994 49
Q ss_pred CCHHHHHhc
Q 002285 813 KDEDIYTFF 821 (942)
Q Consensus 813 nDEdMF~~~ 821 (942)
||.+|++.-
T Consensus 215 ND~eMl~~~ 223 (245)
T PLN02423 215 NDHEIFESE 223 (245)
T ss_pred CcHHHHhCC
Confidence 999999764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.6e-17 Score=169.93 Aligned_cols=182 Identities=15% Similarity=0.242 Sum_probs=119.5
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENG 680 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG 680 (942)
|+|++|+||||++. +..+++++.++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++||
T Consensus 2 k~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NG 66 (215)
T TIGR01487 2 KLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENG 66 (215)
T ss_pred cEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccC
Confidence 69999999999975 45689999999999987 799999999999999999888774 47999999
Q ss_pred eEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCC
Q 002285 681 MFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNA 760 (942)
Q Consensus 681 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~ 760 (942)
+.+...++. ....+ ....|...-.... .+....-...+ ....+.++.. ... ...+...+ .. .
T Consensus 67 a~i~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~----~ 128 (215)
T TIGR01487 67 GVIFYNKED-IFLAN--MEEEWFLDEEKKK-RFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE----R 128 (215)
T ss_pred cEEEeCCCc-EEEec--ccchhhHHHhhhh-hhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----C
Confidence 999864332 11111 1111111000000 00000000000 0111111111 111 11222223 21 2
Q ss_pred CeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 761 SVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 761 ~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
++.+..+...+||.|.+++||.|+++++++++ ++.+.+++||| +.||.+||+.++..
T Consensus 129 ~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~~ 185 (215)
T TIGR01487 129 GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGFK 185 (215)
T ss_pred CeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCCe
Confidence 45555566789999999999999999999998 56788999999 99999999999763
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=169.62 Aligned_cols=184 Identities=17% Similarity=0.128 Sum_probs=120.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC---ceEEeecc
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN---MWLAAENG 680 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~---l~liaehG 680 (942)
+|++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~--------------~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCC--------------CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 5899999999975 22345559999999987 699999999999999999998874 46999999
Q ss_pred eEEEeC-CCc-e---eecccCCCChhHHHHHHHHHHHHHhcCCC-eeeee-----------------------ecceEEE
Q 002285 681 MFLRLT-TGE-W---MTTMPENLNMDWVDSVKHVFEYFTERTPR-SHFEV-----------------------RETSLVW 731 (942)
Q Consensus 681 ~~ir~~-~~~-w---~~~~~~~~~~~w~~~v~~il~~~~~r~~G-s~iE~-----------------------K~~sl~~ 731 (942)
+.+... ... + .... ....| +.+.++++...+...- ..... +.....+
T Consensus 66 a~i~~~~~~~~~~~~~~~~---~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEELWREEPGYPRII---LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCcccccCCCceEEe---cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 999853 111 1 0000 11122 3455555433221000 00000 0111111
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
... .+++ ...++.+.+ .. .++.+..+...+||.|++++||.|+++++++++ ++.+.+++||| .
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 1111 111222222 21 245666677889999999999999999999998 57899999999 9
Q ss_pred CCCHHHHHhcCc
Q 002285 812 QKDEDIYTFFEP 823 (942)
Q Consensus 812 ~nDEdMF~~~~~ 823 (942)
.||++||++++.
T Consensus 205 ~NDi~ml~~ag~ 216 (221)
T TIGR02463 205 PNDLPLLEVADY 216 (221)
T ss_pred HHHHHHHHhCCc
Confidence 999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-15 Score=176.42 Aligned_cols=285 Identities=22% Similarity=0.233 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCCCEEEEcCCchhhHHHHHHhh---CCCCeEEEEeccC-----CC-ChhHhhcCCch-
Q 002285 222 FDAYKRANQMFAKVVNNIY--EEGDVVWCHDYHLMFLPQCLKEY---NNNMKVGWFLHTP-----FP-SSEIHRTLPSR- 289 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~--~~~DiIwvHDyhL~llp~~Lr~~---~p~~~I~~flH~P-----fP-~~e~fr~lp~r- 289 (942)
+..+..+.++-++.+-... -.+||||+||||+.++|.++++. ...++.+|+.|.- |+ .....-.||.-
T Consensus 108 ~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~ 187 (487)
T COG0297 108 AERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEA 187 (487)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHH
Confidence 5555555555444332222 26899999999999999999997 6789999999953 23 11112233410
Q ss_pred ------------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCC
Q 002285 290 ------------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALEL 357 (942)
Q Consensus 290 ------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~ 357 (942)
.-+-.++..||.|..-++.|+..... ...| +.....+.+ +..++.-|-||||.+...+....
T Consensus 188 ~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t---~~~g-~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~ 261 (487)
T COG0297 188 YASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYT---PEYG-EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDP 261 (487)
T ss_pred hhhceeeecCcchhhhhhheeccEEEEECHHHHHhhcc---cccc-ccchhhhhh--ccccEEEEEeeEEecccCccccc
Confidence 12334556678777777777765441 0010 000011111 23567778899998877654321
Q ss_pred -----------hhhHHHHHHHHHHh--c---CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCC
Q 002285 358 -----------PQVQDHINELKERF--A---GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRT 421 (942)
Q Consensus 358 -----------~~~~~~~~~lr~~~--~---~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrg 421 (942)
+.-.+....+++.+ . +.+++..|+||+..||++.+++|+..++++. ++ ++++ |
T Consensus 262 ~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~--~vil--G----- 330 (487)
T COG0297 262 YIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ--LVLL--G----- 330 (487)
T ss_pred chhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce--EEEE--e-----
Confidence 00112223455555 2 5689999999999999999999999999986 43 5444 3
Q ss_pred ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceE
Q 002285 422 DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVL 501 (942)
Q Consensus 422 d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~l 501 (942)
.+ ...++..+..++.++.+++. +.-..+..-...+|..||++++||.+|++||+-++||.- +.++
T Consensus 331 ~g--d~~le~~~~~la~~~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry----Gtvp 395 (487)
T COG0297 331 TG--DPELEEALRALASRHPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY----GTLP 395 (487)
T ss_pred cC--cHHHHHHHHHHHHhcCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc----CCcc
Confidence 33 13577888888888765432 223345667778999999999999999999999999998 3579
Q ss_pred EEeCCCCccccc-C---------CceEEECCCCHHHHHHHHHHHhCC
Q 002285 502 ILSEFAGAAQSL-G---------AGAILVNPWNITEVASSIGYALNM 538 (942)
Q Consensus 502 IlSe~~G~~~~l-g---------~~gllVnP~D~~~lA~aI~~aL~m 538 (942)
|+.+.+|.++.+ . .+|+++.|.+.++++.+|.+++..
T Consensus 396 Iv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~ 442 (487)
T COG0297 396 IVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVL 442 (487)
T ss_pred eEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHH
Confidence 999999999988 2 479999999999999999999864
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=172.17 Aligned_cols=182 Identities=18% Similarity=0.135 Sum_probs=122.0
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGM 681 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~ 681 (942)
||++|+||||++. .....+.++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~--------------~~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDP--------------HGYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCC--------------CCcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 5899999999976 22133468999999987 699999999999999999998885 479999999
Q ss_pred EEEeCCCc------eeecccCCCChhHHHHHHHHHHHHHhcCCCeeee-ee-----------------------cceEEE
Q 002285 682 FLRLTTGE------WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFE-VR-----------------------ETSLVW 731 (942)
Q Consensus 682 ~ir~~~~~------w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE-~K-----------------------~~sl~~ 731 (942)
++...++. |... . ... .+.+.++++.+..+.+..+.. .. .....+
T Consensus 66 ~i~~~~~~~~~~~~~~~~--~--~i~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIA--L--GIP-YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEEEE--c--CCC-HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99854332 1111 1 122 255666666543322111100 00 000000
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCC--CceEEEEeC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTP--IDYVLCIGH 809 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~--~d~vl~iGD 809 (942)
.+ +++ ....+.+.+ . ...+.+..+..++||.|++++||.|+++++++++ ++ .+.+++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 111222222 1 1245666666799999999999999999999998 56 789999999
Q ss_pred CCCCCHHHHHhcCcC
Q 002285 810 FLQKDEDIYTFFEPE 824 (942)
Q Consensus 810 ~d~nDEdMF~~~~~~ 824 (942)
+.||++||+.++..
T Consensus 203 -~~ND~~Ml~~ag~~ 216 (256)
T TIGR01486 203 -SPNDLPLLEVVDLA 216 (256)
T ss_pred -CHhhHHHHHHCCEE
Confidence 99999999999863
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-14 Score=168.35 Aligned_cols=279 Identities=18% Similarity=0.149 Sum_probs=170.9
Q ss_pred CCCEEEEcCCchhhHHHHHHh-hCCCCeEEEEeccCCC-ChhHhhcCCchHHHHHHhh-hccEEeecCHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKE-YNNNMKVGWFLHTPFP-SSEIHRTLPSRTELLRSVL-AADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~-~~p~~~I~~flH~PfP-~~e~fr~lp~r~~il~~ll-~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
.+|+|++|.+.++ |.++.. +..++++.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....+.+.+
T Consensus 124 ~Pd~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~~~l~~--- 195 (425)
T PRK05749 124 RPKLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDAERFLA--- 195 (425)
T ss_pred CCCEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHHHHHHH---
Confidence 4699999987765 444422 2235666655443221 22222222 22333333 479998888887776643
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHHHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
+|. ... +.++|++ +.+.+.... .......+++.+ +++++|+++++. .|+...+|+||.
T Consensus 196 --~g~-----------~~~-i~vi~n~-~~d~~~~~~----~~~~~~~~r~~~~~~~~vil~~~~~--~~~~~~ll~A~~ 254 (425)
T PRK05749 196 --LGA-----------KNE-VTVTGNL-KFDIEVPPE----LAARAATLRRQLAPNRPVWIAASTH--EGEEELVLDAHR 254 (425)
T ss_pred --cCC-----------CCC-cEecccc-cccCCCChh----hHHHHHHHHHHhcCCCcEEEEeCCC--chHHHHHHHHHH
Confidence 221 123 5667763 333222111 112234566666 677888998874 688999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCC-cC------cccEEEeCCCCCHHHHHHHHHH
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGT-LT------TVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~-~~------~~pV~~l~~~v~~~el~aly~~ 470 (942)
++.+++|+++ |+++ |++++. .+++++++.+.+..... .+ -..|. +.+ ...++..+|+.
T Consensus 255 ~l~~~~~~~~----liiv-----G~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~~el~~~y~~ 319 (425)
T PRK05749 255 ALLKQFPNLL----LILV-----PRHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TMGELGLLYAI 319 (425)
T ss_pred HHHHhCCCcE----EEEc-----CCChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cHHHHHHHHHh
Confidence 9988888864 4433 566653 12344444443221100 00 01232 222 35799999999
Q ss_pred ccEEEE-CCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHH
Q 002285 471 TDVALV-TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVASSIGYALNMPADEREK 545 (942)
Q Consensus 471 ADv~v~-pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 545 (942)
||++++ +|+.||+|++++||||| +.|+|++...|....+ ..+|+++.|.|.+++|++|.+++++ ++.+.+
T Consensus 320 aDi~~v~~S~~e~~g~~~lEAma~----G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~-~~~~~~ 394 (425)
T PRK05749 320 ADIAFVGGSLVKRGGHNPLEPAAF----GVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTD-PDARQA 394 (425)
T ss_pred CCEEEECCCcCCCCCCCHHHHHHh----CCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcC-HHHHHH
Confidence 999665 68889999999999999 3567776654433222 3568888899999999999999975 557777
Q ss_pred HHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 546 RHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 546 r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
+.+++++++.++. .-.++.++.+.
T Consensus 395 m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 395 YGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred HHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 8888888887652 33344444443
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-16 Score=157.52 Aligned_cols=156 Identities=29% Similarity=0.412 Sum_probs=118.3
Q ss_pred cCCceEEEeecccccCCHHHHHHHHHHhHHh-CCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcc
Q 002285 372 AGRKVMLGVDRLDMIKGIPQKILAFEKFLEE-NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTV 450 (942)
Q Consensus 372 ~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~-~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~ 450 (942)
.++++|+++||+.+.||+..+++|+..+.++ .+++ .|+.+| +++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G-----~~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVG-----DGEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEES-----HCCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEc-----ccccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 6664 455443 33322 3344444433321 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHH
Q 002285 451 PIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 528 (942)
Q Consensus 451 pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~l 528 (942)
.|+|+ +.++.+++..+|+.||++|+||..||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~~-~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~----g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIFL-GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC----GCPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEEE-ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT----T-EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred ccccc-ccccccccccccccceecccccccccccccccccccc----ccceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 25554 5666899999999999999999999999999999999 3579999988877777 568999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 529 ASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
+++|.+++.++ +.+..+.+++++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999875 455555555543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-15 Score=166.22 Aligned_cols=185 Identities=14% Similarity=0.135 Sum_probs=123.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+||+|+||||++. +..+++.++++|++|.+ .|..++|+|||+...+...+..++ .++|+.|
T Consensus 4 ~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 589999999999985 23567889999999987 699999999999999999988875 3799999
Q ss_pred ceEEEeCCC--------------ceeecccCCCChhHHHHHHHHHHHHHhcCCCee-eeee-------------------
Q 002285 680 GMFLRLTTG--------------EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSH-FEVR------------------- 725 (942)
Q Consensus 680 G~~ir~~~~--------------~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~-iE~K------------------- 725 (942)
|+.+...++ .|.... ..+ .+.+.++++.+.....-.+ +...
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIEL--GPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEEc--CCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999975322 222111 112 2445555544322211000 0000
Q ss_pred ----cceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCC
Q 002285 726 ----ETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPI 801 (942)
Q Consensus 726 ----~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 801 (942)
.....+-+. .++ .....+...+ ...++.+..++.++||.|.+ +||.|++++++.++ +++
T Consensus 144 ~~~~~~~~~~~~~-~~~----~~~~~~~~~l-----~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLWN-GSE----AAKERFEEAL-----KRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceeec-Cch----HHHHHHHHHH-----HHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 000000000 000 0111222222 12246666777899999999 99999999999988 678
Q ss_pred -ceEEEEeCCCCCCHHHHHhcCcC
Q 002285 802 -DYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 802 -d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
+.+++||| +.||++||+.++..
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~~ 229 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADIA 229 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCee
Confidence 99999999 99999999999863
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.4e-15 Score=177.90 Aligned_cols=188 Identities=16% Similarity=0.158 Sum_probs=124.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEee
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAE 678 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 678 (942)
.+|+||+|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 5799999999999986 23456789999999997 699999999999999999888874 479999
Q ss_pred cceEEEeCCCcee------------ecccCCCChhHHHHHHHHHHHHHhcCC----------Ceeeeeecc---------
Q 002285 679 NGMFLRLTTGEWM------------TTMPENLNMDWVDSVKHVFEYFTERTP----------RSHFEVRET--------- 727 (942)
Q Consensus 679 hG~~ir~~~~~w~------------~~~~~~~~~~w~~~v~~il~~~~~r~~----------Gs~iE~K~~--------- 727 (942)
||+.+...++... .+.....+ .+.+.++++...+... +.++..+..
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999985433100 01101122 3445555554433211 111111000
Q ss_pred ----------------eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHh
Q 002285 728 ----------------SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEI 791 (942)
Q Consensus 728 ----------------sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l 791 (942)
+..+.+. .++ ....++.+.+ . ...+++..|..++||. .++|||.||++|++.+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~-gd~----e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~ 625 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIE-GDK----RSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF 625 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEc-CCH----HHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh
Confidence 0000000 000 1122333333 2 2256777799999999 5999999999999998
Q ss_pred cccCCCCCCCceEEEE--eCCCCCCHHHHHhcCcC
Q 002285 792 VRHKGLKTPIDYVLCI--GHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 792 ~~~~~~~~~~d~vl~i--GD~d~nDEdMF~~~~~~ 824 (942)
+ ++.+.+++| || +.||.+||++++..
T Consensus 626 g------I~~~eViafalGD-s~NDisMLe~Ag~g 653 (694)
T PRK14502 626 R------LNFGNIHTFGLGD-SENDYSMLETVDSP 653 (694)
T ss_pred C------CCccceEEEEcCC-cHhhHHHHHhCCce
Confidence 7 445677777 99 99999999999863
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-15 Score=173.51 Aligned_cols=196 Identities=15% Similarity=0.204 Sum_probs=124.9
Q ss_pred hhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHH-HHhhhCCCCeEEEEcCCChhhHHHhhccc---
Q 002285 596 SYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPL-KRLCDDPMTTVVVLSGSDRNVLDDNFGEY--- 671 (942)
Q Consensus 596 ~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL-~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--- 671 (942)
++..+.+.+|++|+||||++..+ +..+++....+| +++.+ .+..++++|||+...+.++.+.+
T Consensus 3 ~~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~ 69 (413)
T PLN02382 3 RLSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLL 69 (413)
T ss_pred cccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCC
Confidence 45667789999999999997521 224665555555 77775 69999999999988777765554
Q ss_pred -CceEEeecceEEEeCCC-----ceeecccCCCChhHHH-HHHHHHHHHHhcCCC----eeeeeecceEEEEEeccchHH
Q 002285 672 -NMWLAAENGMFLRLTTG-----EWMTTMPENLNMDWVD-SVKHVFEYFTERTPR----SHFEVRETSLVWNYKYADLEF 740 (942)
Q Consensus 672 -~l~liaehG~~ir~~~~-----~w~~~~~~~~~~~w~~-~v~~il~~~~~r~~G----s~iE~K~~sl~~hyr~ad~e~ 740 (942)
+..+|+.||++|...+. .|.... +..|.. .+.+. ....+. ...+.+...+.+++... .
T Consensus 70 ~p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~----~~~~~~l~~q~~~~~~~~Ki~~~~~~~---~ 138 (413)
T PLN02382 70 TPDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEE----TSKFPELKLQPETEQRPHKVSFYVDKK---K 138 (413)
T ss_pred CCCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHH----HhcCCCcccCCcccCCCeEEEEEechH---H
Confidence 33588889999975321 232221 122321 12222 222322 22233445555555421 1
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHH
Q 002285 741 GRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYT 819 (942)
Q Consensus 741 ~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~ 819 (942)
......++.+.+ .. ....+.+ ..+..++||.|+++|||.||+.|+++++..+ ++.+.+++||| +.||.+||+
T Consensus 139 ~~~~~~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g---i~~~~~iafGD-s~NDleMl~ 211 (413)
T PLN02382 139 AQEVIKELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG---KAPVNTLVCGD-SGNDAELFS 211 (413)
T ss_pred hHHHHHHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC---CChhcEEEEeC-CHHHHHHHh
Confidence 111123333333 21 1123443 4678899999999999999999999983211 67889999999 999999999
Q ss_pred hcC
Q 002285 820 FFE 822 (942)
Q Consensus 820 ~~~ 822 (942)
.++
T Consensus 212 ~ag 214 (413)
T PLN02382 212 VPD 214 (413)
T ss_pred cCC
Confidence 987
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.4e-15 Score=158.47 Aligned_cols=188 Identities=15% Similarity=0.162 Sum_probs=124.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+||+|+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 479999999999986 23467889999999997 699999999999999999998884 4899999
Q ss_pred ceEEEeCCCceeec-c-cC---CCChhH-------HHHHHHHHHHHHhcCC------------------Ceee------e
Q 002285 680 GMFLRLTTGEWMTT-M-PE---NLNMDW-------VDSVKHVFEYFTERTP------------------RSHF------E 723 (942)
Q Consensus 680 G~~ir~~~~~w~~~-~-~~---~~~~~w-------~~~v~~il~~~~~r~~------------------Gs~i------E 723 (942)
|+.|..+.. |... . +. ..+..| ...++.+++....... |.-. -
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985432 2200 0 00 001111 3344444444332211 1111 1
Q ss_pred eecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEE------------------C---CCCHHH
Q 002285 724 VRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRA------------------V---GVTKGA 782 (942)
Q Consensus 724 ~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p------------------~---gvnKG~ 782 (942)
.+++|-.+++...+... .+.+ ...++.++.|...+.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~~--------~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPARL--------REAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHHH--------HHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 13344445554322111 2222 223678888887777775 5 899999
Q ss_pred HHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 783 AIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 783 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|++.|.+.+.-.. ..-.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~~----~~~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRHL----GPIKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhcc----CCceEEEecC-ChhhHHHHHhCCe
Confidence 9999999876211 1226899999 9999999999976
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.8e-15 Score=157.91 Aligned_cols=187 Identities=18% Similarity=0.176 Sum_probs=117.7
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEeecce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAENGM 681 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaehG~ 681 (942)
+||+|+||||++. . .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~-~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPP--------------G-YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCC--------------C-CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 5899999999984 1 245679999999997 5999999999999999998888754 79999999
Q ss_pred EEEeCCC-------------ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEE--EEeccchHHh-----
Q 002285 682 FLRLTTG-------------EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVW--NYKYADLEFG----- 741 (942)
Q Consensus 682 ~ir~~~~-------------~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~--hyr~ad~e~~----- 741 (942)
.+..+.. ... +.....+ .+.++++++...++.+-.++.. ..... .+....+...
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~---~~~~~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 138 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKP---VAKIRAALKEAENEYGLKYYGN--STAEEVEKLTGLPRELAPLAKR 138 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCC---HHHHHHHHHHHHHhcCccchhc--CCHHHHHHHHCcCHHHHHHHHh
Confidence 9985321 110 1101122 3445555554433122111100 00000 0000000000
Q ss_pred -----------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC
Q 002285 742 -----------RLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF 810 (942)
Q Consensus 742 -----------~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~ 810 (942)
..+..++.+.+ . ...+.+..+..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 139 ~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD- 207 (225)
T TIGR02461 139 REYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD- 207 (225)
T ss_pred hhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC-
Confidence 00112222222 1 2356778887778875 4999999999999988631 24567999999
Q ss_pred CCCCHHHHHhcCc
Q 002285 811 LQKDEDIYTFFEP 823 (942)
Q Consensus 811 d~nDEdMF~~~~~ 823 (942)
+.||.+||++++.
T Consensus 208 ~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 SENDFPMFEVVDL 220 (225)
T ss_pred CHHHHHHHHhCCC
Confidence 9999999999975
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=150.01 Aligned_cols=165 Identities=18% Similarity=0.261 Sum_probs=131.1
Q ss_pred eeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEE
Q 002285 335 RLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLI 413 (942)
Q Consensus 335 r~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLv 413 (942)
...++.++||.|+++.|.|.... +. .+...|+.++||-++||++.++..+.++.+++|+.| ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 46689999999999999985431 22 344788999999999999999999999999999976 44
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhh
Q 002285 414 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493 (942)
Q Consensus 414 qi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~ 493 (942)
++ ||||....|++.+++.- + ..+|. +.|.++++++...|...|||+.||+.|.|+++++||+.|
T Consensus 231 i~-----GDGPk~i~lee~lEk~~--l--------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 II-----GDGPKRIDLEEMLEKLF--L--------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Ee-----cCCcccchHHHHHHHhh--c--------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 33 89997766776666551 1 13466 468899999999999999999999999999999999999
Q ss_pred ccCCCce-EEEeCCCCcccccCCce-EEECCCCHHHHHHHHHHHhC
Q 002285 494 QASKKGV-LILSEFAGAAQSLGAGA-ILVNPWNITEVASSIGYALN 537 (942)
Q Consensus 494 ~~~~~G~-lIlSe~~G~~~~lg~~g-llVnP~D~~~lA~aI~~aL~ 537 (942)
|. +|.+..+|+.+.| ... +...+-.++++++++.++++
T Consensus 295 -----GL~VVsTrVGGIpeVL-P~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 295 -----GLPVVSTRVGGIPEVL-PEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred -----CCEEEEeecCCccccC-CccceeccCCChHHHHHHHHHHHH
Confidence 65 6666677877777 444 33455568888888888775
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-14 Score=156.90 Aligned_cols=184 Identities=21% Similarity=0.295 Sum_probs=116.3
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc----CceEEe
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY----NMWLAA 677 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~lia 677 (942)
++||++|+||||++. +.....++.+.|+ ....++..++++|||++..+.+.+... +.++|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 689999999999921 1112355666666 334578999999999999999888765 357999
Q ss_pred ecceEEEeCC-----CceeecccCCCChhHH-HHHHHHHHHHHhcCCCeee----eeecceEEEEEeccchHHhHHHHHH
Q 002285 678 ENGMFLRLTT-----GEWMTTMPENLNMDWV-DSVKHVFEYFTERTPRSHF----EVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 678 ehG~~ir~~~-----~~w~~~~~~~~~~~w~-~~v~~il~~~~~r~~Gs~i----E~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
++|++|.... ..|...+ ...|. +.+.+++ .+.++... +.....+++.++..+.. ....+
T Consensus 67 svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l----~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~ 135 (247)
T PF05116_consen 67 SVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEIL----AELPGLRPQPESEQRPFKISYYVDPDDSA---DILEE 135 (247)
T ss_dssp TTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHH----HCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHH
T ss_pred cCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHH----HHhhCcccCCccccCCeeEEEEEecccch---hHHHH
Confidence 9999998622 1232222 12333 2333333 33444332 22334555555543321 12334
Q ss_pred HHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 748 ILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 748 l~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
+.+.+ .. ....+.++. +...++|.|++++||.||+.|+++++ ++.+.++++|| +.||.+||...
T Consensus 136 i~~~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 136 IRARL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp HHHHH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred HHHHH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 44444 22 123445544 67889999999999999999999998 56889999999 99999999554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-12 Score=150.58 Aligned_cols=264 Identities=17% Similarity=0.143 Sum_probs=159.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHH-HHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTEL-LRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
+..++|.+..-...+... .+..++++-++-.|+.... .-+....+ ...+..||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~--~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPG--GPPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCC--CCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 566888886544444443 4566777776644432110 00111111 22334688887777654433211
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
+ + .++.++|+|+|.+.|.+....+.. ...+ ...++++|+|+|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 467889999999999754322110 0111 124678999999999977664 34443 3
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|+++ ++| || +++...+ ...+ .. ...|+| .|.++.+++.++|+.||++++|+..
T Consensus 228 ~~~p~~~--~vl--iG-----~~~~~~~----~~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS--FVL--IG-----PVDVSID----PSAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE--EEE--EC-----CCcCccC----hhHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4578864 444 43 3211101 1111 00 113654 5789999999999999999999863
Q ss_pred -----CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 481 -----DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 481 -----EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
+++++.++||||| +.|||+|....+.+. +. +..+.+.|.++++++|.++|..+..++..+. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~----G~PVVat~~~~~~~~-~~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAA----GKPVVATPLPEVRRY-ED-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhcc----CCCEEecCcHHHHhh-cC-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 5789999999999 346777665443332 23 3444567999999999998765543333322 22688
Q ss_pred hcCHHHHHHHHHHHHHH
Q 002285 556 THTSQEWAATFVSELND 572 (942)
Q Consensus 556 ~~~~~~W~~~fl~~L~~ 572 (942)
+||++.=++.++..|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 89999888888866653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.4e-12 Score=144.42 Aligned_cols=195 Identities=11% Similarity=0.056 Sum_probs=127.8
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHHHhHHh----CCCCCC
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFEKFLEE----NPSWRD 408 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~----~P~~~~ 408 (942)
..+|.+++++||.+.+.+. . ....+++++ +++++|+++||....||+..+++++..++.. .+++
T Consensus 172 ~~ki~v~g~~v~~~f~~~~-~------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~-- 242 (382)
T PLN02605 172 PSQIRVYGLPIRPSFARAV-R------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG-- 242 (382)
T ss_pred HHHEEEECcccCHhhccCC-C------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCc--
Confidence 4577888999987544321 1 112355555 3678999999999999999999999876521 3443
Q ss_pred cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHH
Q 002285 409 KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSY 488 (942)
Q Consensus 409 ~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~l 488 (942)
.++.++ |+++. ++++++++.. + ..|++ .|++ +++..+|++||++|.+| .|++++
T Consensus 243 --~~~vi~----G~~~~---~~~~L~~~~~--~--------~~v~~-~G~~--~~~~~l~~aaDv~V~~~----g~~ti~ 296 (382)
T PLN02605 243 --QVVVIC----GRNKK---LQSKLESRDW--K--------IPVKV-RGFV--TNMEEWMGACDCIITKA----GPGTIA 296 (382)
T ss_pred --eEEEEE----CCCHH---HHHHHHhhcc--c--------CCeEE-Eecc--ccHHHHHHhCCEEEECC----CcchHH
Confidence 233333 33332 3344443311 1 12544 4555 47999999999999866 378999
Q ss_pred HHHhhccCCCceEEEeCC-----CCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHH
Q 002285 489 EFVACQASKKGVLILSEF-----AGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWA 563 (942)
Q Consensus 489 EamA~~~~~~G~lIlSe~-----~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 563 (942)
||||| +.|+|++.. .|.++.+-.+|.-+.+.|+++++++|.++|.++++.++++.++++++...+....-+
T Consensus 297 EAma~----g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~ 372 (382)
T PLN02605 297 EALIR----GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIV 372 (382)
T ss_pred HHHHc----CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHH
Confidence 99999 357888875 233343412222333589999999999999875666667777778877777766666
Q ss_pred HHHHHH
Q 002285 564 ATFVSE 569 (942)
Q Consensus 564 ~~fl~~ 569 (942)
+.+++.
T Consensus 373 ~~l~~~ 378 (382)
T PLN02605 373 HDLHEL 378 (382)
T ss_pred HHHHHH
Confidence 555443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.7e-11 Score=139.32 Aligned_cols=186 Identities=16% Similarity=0.162 Sum_probs=144.1
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCCC---CCCcEEEEEEEcC-CCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPS---WRDKVVLIQIAVP-TRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~---~~~~vvLvqi~~p-srgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
.+.+++.+-|+.+-||+...|.||..+....|+ +. ..++..+.+ +.+...+..++..++.+++++.+.. +
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~--~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g--- 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISS--EHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G--- 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCc--eEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C---
Confidence 367888999999999999999999999888754 33 444433322 3333455556677778888775321 2
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHH
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 526 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~ 526 (942)
.++++....++.+...++..+.+.+.++..|-||+|++||||| +-|+|++..+|..|.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~----glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC----GLPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc----CCCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 2344556777888888888899999999999999999999999 3689999999999998 899999999 666
Q ss_pred ---HHHHHHHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHHHHHHH
Q 002285 527 ---EVASSIGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATFVSELND 572 (942)
Q Consensus 527 ---~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~L~~ 572 (942)
.+|++|.++.+++. .+.++.++.+++|++ |++++..+++.+-+..
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIASVLGK 467 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHh
Confidence 59999999998754 588888999999987 8876666666555553
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.1e-11 Score=125.40 Aligned_cols=119 Identities=29% Similarity=0.333 Sum_probs=83.9
Q ss_pred EeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCC
Q 002285 379 GVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRS 458 (942)
Q Consensus 379 ~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~ 458 (942)
++||+.+.||+..+++|+..+.+++|++ .++.+|.. +.....+..+... +. ...|.++...
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~-----~~~~~~~~~~~~~--------~~--~~~v~~~~~~ 169 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDG-----PEREYLEELLAAL--------LL--LDRVIFLGGL 169 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCC-----CChHHHHHHHHhc--------CC--cccEEEeCCC
Confidence 8999999999999999999999888774 46655532 1111111111111 11 1236555433
Q ss_pred CCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEE
Q 002285 459 LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILV 520 (942)
Q Consensus 459 v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllV 520 (942)
.+.+++..+++.||+++.||..||+|++++|||+| +.|+|+|+..+..+.+ +.+|++|
T Consensus 170 ~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~----g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 170 DPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC----GLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC----CCCEEEcCCCCcceEEECCCceEEC
Confidence 35667777777799999999999999999999999 3689999988887755 4567654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.2e-11 Score=128.77 Aligned_cols=199 Identities=24% Similarity=0.343 Sum_probs=141.8
Q ss_pred EEEEeeCccCccccchh-cCChhhHHHHHHHHHHhcC--CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 338 RVAAFPIGIDSDRFVRA-LELPQVQDHINELKERFAG--RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 338 ~v~viP~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
++.++|+|++.+.+... .. ...+ ..+++++||+.+.||+..+++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67889999999887642 10 0112 36899999999999999999999999887765 33444
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
++ .++.. ...+..++...+.. ..|.| .+.++.+++..+|+.||++++||..||+|++++|||+|
T Consensus 236 ~g-----~~~~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VG-----DGPER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred Ec-----CCCcc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 43 22221 12222233333221 12554 67788888999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCcccccCC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHH
Q 002285 495 ASKKGVLILSEFAGAAQSLGA--GAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELN 571 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~lg~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~ 571 (942)
+.|+|+|...|..+.+.. .|+++++.|.+++++++..++++. +.++......++.+ ..+++..-++.+++.+.
T Consensus 300 ---g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 300 ---GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ---CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 347888888888888733 388888889999999999999876 34444444344444 57888777766665555
Q ss_pred Hh
Q 002285 572 DT 573 (942)
Q Consensus 572 ~~ 573 (942)
..
T Consensus 376 ~~ 377 (381)
T COG0438 376 EL 377 (381)
T ss_pred HH
Confidence 43
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-10 Score=129.12 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=146.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|..... ++..+..+..++++.++.|..+|. .. ..++ ...+|.|...++...+.
T Consensus 89 ~pDvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--------- 148 (350)
T cd03785 89 KPDVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--------- 148 (350)
T ss_pred CCCEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---------
Confidence 5799999975443 333343444466776655555542 11 1111 11257666555432221
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHH-HHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKI-LAFE 397 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL-~Af~ 397 (942)
....++.++|+|+|.+.+.+.. . ++++ +++++|+.+++....|+...++ +|++
T Consensus 149 ------------~~~~~~~~i~n~v~~~~~~~~~------~-----~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~ 205 (350)
T cd03785 149 ------------FPKDKAVVTGNPVREEILALDR------E-----RARLGLRPGKPTLLVFGGSQGARAINEAVPEALA 205 (350)
T ss_pred ------------CCCCcEEEECCCCchHHhhhhh------h-----HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHH
Confidence 1235778899999987665321 0 2222 4577888888887888877654 7777
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
.+.+ ++ +.++.++ |++ +.+++++. +.+. . ..|+++ +.+ +++..+|+.||++|.+
T Consensus 206 ~l~~--~~----~~~~~i~----G~g-~~~~l~~~----~~~~-~-------~~v~~~-g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 206 ELLR--KR----LQVIHQT----GKG-DLEEVKKA----YEEL-G-------VNYEVF-PFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred Hhhc--cC----eEEEEEc----CCc-cHHHHHHH----Hhcc-C-------CCeEEe-ehh--hhHHHHHHhcCEEEEC
Confidence 7642 33 3333233 333 22334433 3322 1 124443 433 7999999999999987
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCC--------ccccc--CCceEEECCC--CHHHHHHHHHHHhCCCHHHHHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVASSIGYALNMPADEREK 545 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G--------~~~~l--g~~gllVnP~--D~~~lA~aI~~aL~m~~~er~~ 545 (942)
| | +.+++|||+| +-|+|++...| .++.+ +..|++|++. |.++++++|..+++. ++.++.
T Consensus 260 s---g-~~t~~Eam~~----G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~ 330 (350)
T cd03785 260 A---G-ASTVAELAAL----GLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD-PERLKA 330 (350)
T ss_pred C---C-HhHHHHHHHh----CCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HHHHHH
Confidence 7 3 5789999999 34677765443 12344 4579999987 999999999999964 556666
Q ss_pred HHHHHhHHHHhcCHH
Q 002285 546 RHLHNFMHVTTHTSQ 560 (942)
Q Consensus 546 r~~~~~~~v~~~~~~ 560 (942)
+..++++++..+...
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (350)
T cd03785 331 MAEAARSLARPDAAE 345 (350)
T ss_pred HHHHHHhcCCCCHHH
Confidence 667777766555443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-10 Score=129.59 Aligned_cols=252 Identities=15% Similarity=0.040 Sum_probs=157.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|+.|+......+. +..+....|+.++.|..+|.. ...++. ..+|.+...+... +
T Consensus 91 ~pDvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~-------- 148 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F-------- 148 (357)
T ss_pred CCCEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h--------
Confidence 57999999855433333 434445678877766544421 011111 1345544333210 0
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHH-HHHHHh
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKI-LAFEKF 399 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL-~Af~~l 399 (942)
......++.++|+|||.+.+.+.. . ...+ .. .+.++|+++|+....|++..++ +|++++
T Consensus 149 ----------~~~~~~~i~vi~n~v~~~~~~~~~----~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 149 ----------PEFFKPKAVVTGNPVREEILALAA----P---PARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ----------hccCCCCEEEECCCCChHhhcccc----h---hhhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 001246789999999987654311 0 0111 11 3677889999999999987776 888877
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+. | .+++++ |+++. +++++.+ . .+. . |++ .+++ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~-----G~g~~-~~~~~~~----~-~~~-------~-v~~-~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQT-----GKGDL-EEVRAAY----A-AGI-------N-AEV-VPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEc-----CCCcH-HHHHHHh----h-cCC-------c-EEE-eehH--hhHHHHHHhCCEEEECC-
Confidence 442 2 234444 44442 2332222 1 111 1 443 3444 68999999999999987
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCc--------cccc--CCceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHH
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGA--------AQSL--GAGAILVNPWN--ITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~--------~~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
| +.+++|||+| +.|+|++...|. ++.+ +..|+++++.| +++++++|.+++++ ++.++++.
T Consensus 261 --g-~~~~~Ea~~~----g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAA----GLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHh----CCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 5889999999 346776654321 2334 45789999888 99999999999987 55677777
Q ss_pred HHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 548 LHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 548 ~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
++++++...++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 778888888888888887776553
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-09 Score=125.61 Aligned_cols=262 Identities=12% Similarity=0.085 Sum_probs=154.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++| +....++.+.+....++|+...+ +-|-. + ...+. ..+|.+...+....+.+.+ .
T Consensus 104 ~pD~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~~---~~ad~i~~~s~~~~~~l~~-----~ 165 (380)
T PRK13609 104 KPDIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWVH---REVDRYFVATDHVKKVLVD-----I 165 (380)
T ss_pred CcCEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-ccccc---CCCCEEEECCHHHHHHHHH-----c
Confidence 57999996 44455666655555567765333 21210 0 01111 2578887766554433322 1
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCc-eEEEeecccccCCHHHHHHHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRK-VMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
|. ...++.++++.++. .|..... ...+++++ ++++ ++++.|++...||+..+++++.
T Consensus 166 gi-----------~~~ki~v~G~p~~~-~f~~~~~-------~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~ 226 (380)
T PRK13609 166 GV-----------PPEQVVETGIPIRS-SFELKIN-------PDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLM 226 (380)
T ss_pred CC-----------ChhHEEEECcccCh-HHcCcCC-------HHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHh
Confidence 21 22345554443432 2332111 11244444 2444 4556789999999999998875
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
+ .|++ .++.+++. +++ +++++++++...+ ..|+++ +++ +++..+|+.||+++.
T Consensus 227 ~----~~~~----~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~~-g~~--~~~~~l~~~aD~~v~- 279 (380)
T PRK13609 227 S----VPDL----QVVVVCGK---NEA----LKQSLEDLQETNP--------DALKVF-GYV--ENIDELFRVTSCMIT- 279 (380)
T ss_pred h----CCCc----EEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEEE-ech--hhHHHHHHhccEEEe-
Confidence 3 3554 35544421 222 3445555544322 136655 555 468899999999874
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCC-CCcc----cccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEF-AGAA----QSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~-~G~~----~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
++.|++++||||| +.|+|++.. .|.. ..+...|+.+.+.|.++++++|.++++++ +.+.++.++.++
T Consensus 280 ---~~gg~t~~EA~a~----g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (380)
T PRK13609 280 ---KPGGITLSEAAAL----GVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKLLQMKEAMKS 351 (380)
T ss_pred ---CCCchHHHHHHHh----CCCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHHHHHHHHHHH
Confidence 4458999999999 356777663 4421 12223455566789999999999999864 456666666777
Q ss_pred HHHhcCHHHHHHHHHHHHHHhHH
Q 002285 553 HVTTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 553 ~v~~~~~~~W~~~fl~~L~~~~~ 575 (942)
....++.+..++.+++.+....+
T Consensus 352 ~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 352 LYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred hCCCchHHHHHHHHHHhhhhhhh
Confidence 77778889999888877765544
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.3e-10 Score=126.73 Aligned_cols=181 Identities=13% Similarity=0.094 Sum_probs=117.7
Q ss_pred EEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHH-HHHHHHhHHhCCCCCCcEEEEEEEc
Q 002285 340 AAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQK-ILAFEKFLEENPSWRDKVVLIQIAV 417 (942)
Q Consensus 340 ~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~l-L~Af~~ll~~~P~~~~~vvLvqi~~ 417 (942)
.++|+|||...+.... + ...+ .+ ++.++|+++||....|++..+ ++|++++.+. +++ + +.++
T Consensus 153 ~~i~n~v~~~~~~~~~--~-----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~--~--~~~~- 216 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P-----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ--I--VHQT- 216 (348)
T ss_pred eEEcCCcCHHHhcccc--h-----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE--E--EEEC-
Confidence 6889999976554211 0 0111 12 367789999998888997664 4788777543 332 3 2233
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCC
Q 002285 418 PTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASK 497 (942)
Q Consensus 418 psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~ 497 (942)
|+++. + ++++.+.+.+. ..+.++. ..++..+|+.||++|.+| | +.+++|||+|
T Consensus 217 ---g~~~~-~----~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~---- 269 (348)
T TIGR01133 217 ---GKNDL-E----KVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAA---- 269 (348)
T ss_pred ---CcchH-H----HHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHc----
Confidence 33332 2 34444433221 1222222 227899999999999875 4 7899999999
Q ss_pred CceEEEeCCCCcc-------ccc--CCceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHH
Q 002285 498 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAA 564 (942)
Q Consensus 498 ~G~lIlSe~~G~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 564 (942)
+.|+|++...|.. +.+ +.+|+++++.| +++++++|.+++++ ++.++++.+++++++..+...++++
T Consensus 270 g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 270 GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 3577777765432 234 56799999887 99999999999964 5566677777777777776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.8e-09 Score=124.47 Aligned_cols=180 Identities=14% Similarity=0.124 Sum_probs=125.7
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHH--hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHh--hccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLE--ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGR--INGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~--~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~--IN~~~~~~~ 448 (942)
+..+|.+|.|+...||++.++.+++++++ .+|+. .+.+|..|....++.. -+++.+.+.+++.+ ..+
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~~~~~~------ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKRPEFRG------ 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhcccCCC------
Confidence 45688899999999999999999999985 45543 2666666654434332 23456666666553 222
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC--
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALV-TSL-RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP-- 522 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~-pSl-~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP-- 522 (942)
.|.|+. ..+..--..+|..||++++ ||. +|.-|+.-+=||.- |.|..|-.-|...+. +.+|+.+.+
T Consensus 459 --kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~ 530 (601)
T TIGR02094 459 --RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGE 530 (601)
T ss_pred --CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCc
Confidence 366554 4555666778999999999 888 99999999999985 888888887776665 578999985
Q ss_pred ----------CCHHHHHHHHHHHh-----CCC----HHHHHHHHHHHhHH-HHhcCHHHHHHHHHHH
Q 002285 523 ----------WNITEVASSIGYAL-----NMP----ADEREKRHLHNFMH-VTTHTSQEWAATFVSE 569 (942)
Q Consensus 523 ----------~D~~~lA~aI~~aL-----~m~----~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~ 569 (942)
.|.+++-++|.+++ +.+ +..-.++++++... ...+++.+-++.+++.
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998776 221 11233444433322 2357888877777653
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.7e-09 Score=115.34 Aligned_cols=308 Identities=12% Similarity=0.217 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHhh---cC-CCCEEEEc--CCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHH
Q 002285 222 FDAYKRANQMFAKVVNNI---YE-EGDVVWCH--DYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS 295 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~---~~-~~DiIwvH--DyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ 295 (942)
|..+.-+-|..+..|+.. ++ ++|| ||- .|-+. .| .+|+ ....+||...|.|--|.++...+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pdi-~IDtMGY~fs-~p-~~r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPDI-FIDTMGYPFS-YP-IFRR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCchh-eEecCCCcch-hH-HHHH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 556666666666665533 34 6674 554 44332 23 2333 45789999999998888876554332110 1
Q ss_pred hhhccEEeecCHHHHHHHHHHHHHHhccccC---------CCce-e-cCCeeeEEEEeeCccCccccchhcCChhhHHHH
Q 002285 296 VLAADLVGFHTYDYARHFVSACTRILGLEGT---------PEGV-E-DQGRLTRVAAFPIGIDSDRFVRALELPQVQDHI 364 (942)
Q Consensus 296 ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~---------~~~i-~-~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~ 364 (942)
+ ..+---.|-|.|..--. ..|.... ...| + ++.+ .+.++..--+++.+.....+
T Consensus 200 ~-----l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~~--~~~iVyPPC~~e~lks~~~t------- 264 (465)
T KOG1387|consen 200 I-----LVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQSN--TCSIVYPPCSTEDLKSKFGT------- 264 (465)
T ss_pred h-----hhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhcc--ceeEEcCCCCHHHHHHHhcc-------
Confidence 1 11111234444532111 1111100 0001 0 1212 22222222333322211110
Q ss_pred HHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCC--CCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhcc
Q 002285 365 NELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPS--WRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRING 442 (942)
Q Consensus 365 ~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~--~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~ 442 (942)
+-+....+|++|.+-|.|++. .|+-++.++.+.|. ....+.|+++| ..|+... ++.-+.++.++.+++.
T Consensus 265 -----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRneeD--~ervk~Lkd~a~~L~i 335 (465)
T KOG1387|consen 265 -----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEED--EERVKSLKDLAEELKI 335 (465)
T ss_pred -----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChhh--HHHHHHHHHHHHhcCC
Confidence 113457899999999999999 78888888888887 33446777554 4444322 2334456666666654
Q ss_pred ccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc--ccc----C-C
Q 002285 443 RYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA--QSL----G-A 515 (942)
Q Consensus 443 ~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~--~~l----g-~ 515 (942)
.- .|.| ...++.+++..+|..|-+.|.+-..|-||+.+.||||+ |.+.++..+|.. +++ | .
T Consensus 336 ~~------~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~~~~G~~ 403 (465)
T KOG1387|consen 336 PK------HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVTPWDGET 403 (465)
T ss_pred cc------ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeeeccCCcc
Confidence 31 2554 57899999999999999999999999999999999999 776666555433 222 4 4
Q ss_pred ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 516 GAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 516 ~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
+|++.. +.++.|++|.+++.+..++|..+.+.++..+.+++-+.+-++|...+...
T Consensus 404 tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 404 TGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred ceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 788873 67789999999999999998888888899999999888888887655443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.8e-09 Score=122.59 Aligned_cols=242 Identities=12% Similarity=0.044 Sum_probs=139.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch--HHHHHHhhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR--TELLRSVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r--~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|++....++..+..+..++|++++.|.-.. .+ +..++. ...+. ..+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~s~~~~~~l~~---- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAPTEEARRNLLQ---- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCCCHHHHHHHHH----
Confidence 6799999987666565555544457888876653111 00 011211 11111 1245544444333333221
Q ss_pred HhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHh--c-CCceEEEeecccc---cCCHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERF--A-GRKVMLGVDRLDM---IKGIPQK 392 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIl~VgRLd~---~KGi~~l 392 (942)
++....+|.++++++ |...+....... ...++.+ . ++.+++.++|+.. .||+..+
T Consensus 159 ------------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 159 ------------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred ------------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 222356788899885 654333211100 0111222 2 3456778999875 7999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|++++.+. + +.++.. ++++....+++ .+.+.+.. . ..|+| .+....+++..+|+.||
T Consensus 221 ~~al~~l~~~--~----~~vi~~-----~~~~~~~~l~~----~~~~~~~~---~--~~v~~-~~~~~~~~~~~l~~~ad 279 (363)
T cd03786 221 LEALAELAEE--D----VPVVFP-----NHPRTRPRIRE----AGLEFLGH---H--PNVLL-ISPLGYLYFLLLLKNAD 279 (363)
T ss_pred HHHHHHHHhc--C----CEEEEE-----CCCChHHHHHH----HHHhhccC---C--CCEEE-ECCcCHHHHHHHHHcCc
Confidence 9999988543 2 344432 23333333443 33333210 0 12544 44566889999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCC-CHHHHHHHHHHHhCCCH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVASSIGYALNMPA 540 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~-D~~~lA~aI~~aL~m~~ 540 (942)
++|.+|- | +..|||+| +-|+|++...+...++..+|+.+.+. |.++++++|.++++++.
T Consensus 280 ~~v~~Sg----g-i~~Ea~~~----g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 280 LVLTDSG----G-IQEEASFL----GVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEEEcCc----c-HHhhhhhc----CCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 9999994 4 47899998 35788876655454443566655544 79999999999998653
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.4e-09 Score=120.95 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=138.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|......+...+-.+.-++|+++..+.- -+.+.+..+| +++.+.+. .+|++.-.+....+++.+
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~~~~--~~~~r~~~~~~ad~~~~~s~~~~~~l~~---- 158 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYSPMP--EEINRQLTGHIADLHFAPTEQAKDNLLR---- 158 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCCCCc--cHHHHHHHHHHHHhccCCCHHHHHHHHH----
Confidence 57999999644444444443334467887554321 1111111122 22222211 256655556555555432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHhc-CCceEEE-eecc-cccCCHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERFA-GRKVMLG-VDRL-DMIKGIPQKILA 395 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~-VgRL-d~~KGi~~lL~A 395 (942)
.| ....+|.++++|+ |...+.... . ....++++++ ++.+++. ..|. ...||+..+++|
T Consensus 159 -~G-----------~~~~~I~vign~~~d~~~~~~~~-~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a 220 (365)
T TIGR00236 159 -EN-----------VKADSIFVTGNTVIDALLTNVEI-A-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKA 220 (365)
T ss_pred -cC-----------CCcccEEEeCChHHHHHHHHHhh-c-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHH
Confidence 12 2345789999996 543221110 0 1123444553 3345554 4465 345999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
+.++.+++|+++ ++.++.|. +. .+.++. ..++. ...|++ .+.++..++..+|+.||+++
T Consensus 221 ~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~~---~~~~~------~~~v~~-~~~~~~~~~~~~l~~ad~vv 279 (365)
T TIGR00236 221 IREIVEEFEDVQ----IVYPVHLN----PV---VREPLH---KHLGD------SKRVHL-IEPLEYLDFLNLAANSHLIL 279 (365)
T ss_pred HHHHHHHCCCCE----EEEECCCC----hH---HHHHHH---HHhCC------CCCEEE-ECCCChHHHHHHHHhCCEEE
Confidence 999988888754 44333221 11 122222 22211 013554 46788999999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEe-CCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCC
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~ 539 (942)
.+| |.+.+|||+| +.|+|++ +.+|..+.+ ...++++ +.|+++++++|.++++.+
T Consensus 280 ~~S-----g~~~~EA~a~----g~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 280 TDS-----GGVQEEAPSL----GKPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred ECC-----hhHHHHHHHc----CCCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh
Confidence 988 4568999999 3466665 445544444 2345666 589999999999999754
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.8e-09 Score=123.98 Aligned_cols=279 Identities=11% Similarity=0.122 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhh----cCCCCEEE--EcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhh
Q 002285 225 YKRANQMFAKVVNNI----YEEGDVVW--CHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLA 298 (942)
Q Consensus 225 Y~~vN~~fa~~i~~~----~~~~DiIw--vHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~ 298 (942)
|...+..++..+.+. ..++|++. ++.-|... +....|..++.+..|+ -+ . ........+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~---~~~~y~~~l~~~~~ 272 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N---RHHTYLDLYESLSR 272 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c---cccchhhhhhChhh
Confidence 333444444443333 46888888 67777655 3333443345556666 11 1 00112355666667
Q ss_pred ccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEE
Q 002285 299 ADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVML 378 (942)
Q Consensus 299 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl 378 (942)
+|.|...|..-.+..... +.. .. ...+|..+|.+.- . ... . ..++..++.|.+
T Consensus 273 ~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~-~-~~~--~----------~s~r~~~~~I~v 325 (519)
T TIGR03713 273 ADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT-R-LRL--G----------QSQQLYETEIGF 325 (519)
T ss_pred cCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce-E-Eec--C----------hhhcccceEEEE
Confidence 787766564433322211 110 00 1234556776543 1 111 0 111224455556
Q ss_pred EeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC----------
Q 002285 379 GVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT---------- 448 (942)
Q Consensus 379 ~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~---------- 448 (942)
++||| +.|-+..+|+|+.++.+++|+.. +.| .|.. +.. ++.+.+++++.++|..++...
T Consensus 326 ~idrL-~ek~~~~~I~av~~~~~~~p~~~--L~~--~gy~---~~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 394 (519)
T TIGR03713 326 WIDGL-SDEELQQILQQLLQYILKNPDYE--LKI--LTYN---NDN---DITQLLEDILEQINEEYNQDKNFFSLSEQDE 394 (519)
T ss_pred EcCCC-ChHHHHHHHHHHHHHHhhCCCeE--EEE--EEec---Cch---hHHHHHHHHHHHHHhhhchhhhccccchhhh
Confidence 66699 99999999999999999999965 444 4322 111 234455556565544421100
Q ss_pred ------------cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--C
Q 002285 449 ------------TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--G 514 (942)
Q Consensus 449 ------------~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g 514 (942)
-...+.|.+..+..++...|..|.++|.+|..|||+ +.+|||+. |++++ .-|..+.+ |
T Consensus 395 ~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI--nyg~~~~V~d~ 466 (519)
T TIGR03713 395 NQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI--NKVETDYVEHN 466 (519)
T ss_pred hhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee--ecCCceeeEcC
Confidence 001345667777789999999999999999999999 99999997 76555 55667777 8
Q ss_pred CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHH
Q 002285 515 AGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEW 562 (942)
Q Consensus 515 ~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 562 (942)
.+|++| .|+.++++||..+|..+ .........+++.+..|+...-
T Consensus 467 ~NG~li--~d~~~l~~al~~~L~~~-~~wn~~~~~sy~~~~~yS~~~i 511 (519)
T TIGR03713 467 KNGYII--DDISELLKALDYYLDNL-KNWNYSLAYSIKLIDDYSSENI 511 (519)
T ss_pred CCcEEe--CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhHHHH
Confidence 999999 79999999999999865 3445555666666666665443
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.6e-10 Score=115.15 Aligned_cols=192 Identities=18% Similarity=0.230 Sum_probs=116.2
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc---CceEEe
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY---NMWLAA 677 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~l~lia 677 (942)
-.++||+|+||||++..-+| ......|.+|.+ .|..|+.+|..+...+..+-+.+ +.++|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35799999999999964333 224566777775 69999999999999988777666 478999
Q ss_pred ecceEEEeCCCceeecc--c------CCCCh-hHHHHHHHHHHHHHhcCCCeeeee----------------------ec
Q 002285 678 ENGMFLRLTTGEWMTTM--P------ENLNM-DWVDSVKHVFEYFTERTPRSHFEV----------------------RE 726 (942)
Q Consensus 678 ehG~~ir~~~~~w~~~~--~------~~~~~-~w~~~v~~il~~~~~r~~Gs~iE~----------------------K~ 726 (942)
|||+-|..+. .|.... + ..... .-.+.+.+.++.+.+...-.++.+ ++
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998432 222110 0 00000 012333333333322211111110 11
Q ss_pred ceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEE
Q 002285 727 TSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLC 806 (942)
Q Consensus 727 ~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~ 806 (942)
.+.++-.|..| +.+.++ ...+...+++++.|....-+.-....||.|++.+++.+-.- .....++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEEEe
Confidence 11111111111 111111 22222346889999888888888888999999999977521 12345899
Q ss_pred EeCCCCCCHHHHHhcCcC
Q 002285 807 IGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 807 iGD~d~nDEdMF~~~~~~ 824 (942)
+|| +.||.+||+.+...
T Consensus 215 ~GD-g~nD~Pl~ev~d~A 231 (274)
T COG3769 215 LGD-GPNDAPLLEVMDYA 231 (274)
T ss_pred cCC-CCCcccHHHhhhhh
Confidence 999 99999999988653
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.8e-08 Score=116.35 Aligned_cols=261 Identities=11% Similarity=0.044 Sum_probs=151.2
Q ss_pred CCCEEEEcCCchhhHHHHHH-hhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLK-EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr-~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+|+++.. ..+...++ +...++|+. ++++-+-.. + ..+- -.+|.+...+....+.+..
T Consensus 104 kPDvVi~~~p--~~~~~~l~~~~~~~iP~~-~v~td~~~~------~--~w~~---~~~d~~~v~s~~~~~~l~~----- 164 (391)
T PRK13608 104 KPDLILLTFP--TPVMSVLTEQFNINIPVA-TVMTDYRLH------K--NWIT---PYSTRYYVATKETKQDFID----- 164 (391)
T ss_pred CcCEEEECCc--HHHHHHHHHhcCCCCCEE-EEeCCCCcc------c--cccc---CCCCEEEECCHHHHHHHHH-----
Confidence 6799988633 22333343 334466764 334443110 1 0111 2477776666554443321
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCc-eEEEeecccccCCHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRK-VMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~VgRLd~~KGi~~lL~Af 396 (942)
.| ....+|.++++.|+.. |.+... ...+++++ ++++ ++++.||+...||+..+++++
T Consensus 165 ~g-----------i~~~ki~v~GiPv~~~-f~~~~~-------~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~ 225 (391)
T PRK13608 165 VG-----------IDPSTVKVTGIPIDNK-FETPID-------QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI 225 (391)
T ss_pred cC-----------CCHHHEEEECeecChH-hccccc-------HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH
Confidence 11 1234666666666643 432211 11233444 2444 556799999999999999985
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
++..|++ .++.++ |..+ ++.+++.+.. +.. ..|++ .+++ +++..+|+.||++|.
T Consensus 226 ---~~~~~~~----~~vvv~----G~~~---~l~~~l~~~~---~~~------~~v~~-~G~~--~~~~~~~~~aDl~I~ 279 (391)
T PRK13608 226 ---LAKSANA----QVVMIC----GKSK---ELKRSLTAKF---KSN------ENVLI-LGYT--KHMNEWMASSQLMIT 279 (391)
T ss_pred ---HhcCCCc----eEEEEc----CCCH---HHHHHHHHHh---ccC------CCeEE-Eecc--chHHHHHHhhhEEEe
Confidence 2344554 344444 2222 1233333322 111 12544 3444 579999999999996
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
. +.|+++.||||| +-|+|++...+..+.. ...|.-+-+.|.++++++|.++++++ +.+.++.++++
T Consensus 280 k----~gg~tl~EA~a~----G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~ 350 (391)
T PRK13608 280 K----PGGITISEGLAR----CIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTME 350 (391)
T ss_pred C----CchHHHHHHHHh----CCCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHH
Confidence 3 458899999999 3567777543322211 12233333569999999999999754 56667777788
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhHH
Q 002285 552 MHVTTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 552 ~~v~~~~~~~W~~~fl~~L~~~~~ 575 (942)
+....++....++.+++.+.....
T Consensus 351 ~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 351 QDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcCCCCHHHHHHHHHHHhhhhhh
Confidence 888888888888888877665433
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.6e-08 Score=110.55 Aligned_cols=248 Identities=13% Similarity=0.008 Sum_probs=145.4
Q ss_pred HHhhcCCCCEEEEcCCchhh--HH-HHHHh-hCCCCeEEEEeccCCCChhHhhcCC-chHHHHHHhhhccEEeecCHHHH
Q 002285 236 VNNIYEEGDVVWCHDYHLMF--LP-QCLKE-YNNNMKVGWFLHTPFPSSEIHRTLP-SRTELLRSVLAADLVGFHTYDYA 310 (942)
Q Consensus 236 i~~~~~~~DiIwvHDyhL~l--lp-~~Lr~-~~p~~~I~~flH~PfP~~e~fr~lp-~r~~il~~ll~aDlIgF~t~~~~ 310 (942)
+...++++|+|++|..-+.. ++ .++++ +..++++++++|--+|.. +.... ........+..||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 34457899999999864432 22 22222 112699999999876532 11111 02223344456899998887765
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHH
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIP 390 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~ 390 (942)
+.+.+ .|. ...++.++++..+...... +.....++.|+++|||....++.
T Consensus 136 ~~l~~-----~g~-----------~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGL-----------TTDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCC-----------CcCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 121 1234444444332211100 01123456899999999443211
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ 470 (942)
+..|++ .|+++ |++++.. .. ...|+| .|.++.+++..+|+.
T Consensus 186 ----------~~~~~~----~l~i~-----G~g~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQGI----KLTVF-----GPNPEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCCC----eEEEE-----CCCcccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 124554 34444 4554321 00 013554 578999999999998
Q ss_pred ccEEEECCC-----------CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhC
Q 002285 471 TDVALVTSL-----------RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALN 537 (942)
Q Consensus 471 ADv~v~pSl-----------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 537 (942)
|+.+++.- .-.++--..||||| +-|||++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHC----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76665432 12456668899999 3589999998888888 67899998 778999999874
Q ss_pred CCHHHHHHHHHHHhHHHHhcCHHHHHH
Q 002285 538 MPADEREKRHLHNFMHVTTHTSQEWAA 564 (942)
Q Consensus 538 m~~~er~~r~~~~~~~v~~~~~~~W~~ 564 (942)
+++++.++.+++++..+....-...+
T Consensus 298 -~~~~~~~m~~n~~~~~~~~~~g~~~~ 323 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKLLRNGYFTK 323 (333)
T ss_pred -CHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 35666666666666654433333333
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-09 Score=104.76 Aligned_cols=129 Identities=26% Similarity=0.312 Sum_probs=87.2
Q ss_pred CceEEEeecccccCCHHHHHH-HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 374 RKVMLGVDRLDMIKGIPQKIL-AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~-Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
..+|++.|++.+.||+..+++ |++++.+++|++ .|+++| .+++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G-----~~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIG-----NGPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEEC-----ESS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEe-----CCHH------HHHHh-cC----------CCE
Confidence 357889999999999999999 999999999974 455554 3332 12222 11 135
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSL-RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 529 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl-~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA 529 (942)
++ .+.+ +++.++|+.||+++.|+. .+|++..++|||++ +.|+|+|.. |....+ ...++++ +.|.++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~----G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA----GKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT----T--EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh----CCCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 55 4556 689999999999999985 68999999999999 356888877 555544 2466777 89999999
Q ss_pred HHHHHHhC
Q 002285 530 SSIGYALN 537 (942)
Q Consensus 530 ~aI~~aL~ 537 (942)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999875
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.6e-08 Score=117.67 Aligned_cols=182 Identities=15% Similarity=0.085 Sum_probs=124.3
Q ss_pred ceEEEeecccccCCHHHHHHHHHHhHH--hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 375 KVMLGVDRLDMIKGIPQKILAFEKFLE--ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 375 ~iIl~VgRLd~~KGi~~lL~Af~~ll~--~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
.+|.++.|+...||...++..++++.+ .+|+. .+.+|..|.+...+.+ -+++.+++.+++..- ++. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~--pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~p--~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPER--PVQFIFAGKAHPADEP-GKELIQEIVEFSRRP--EFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCccchH-HHHHHHHHHHHHhCc--CCC----CcE
Confidence 378899999999999999999999865 23442 3667766654434432 244566666665411 111 136
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC--CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC------
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSL--RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP------ 522 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl--~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP------ 522 (942)
.|+. ..+..--..++..|||++.||+ +|.-|+.-+=||.- |++-+|..-|...+. |.+|..|.+
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 6654 4556666778999999999999 89999999999885 999999998887776 789999988
Q ss_pred ------CCHHHHHHHHHHHhC----CC-----HHHHHHHHHHHhH-HHHhcCHHHHHHHHHHHHH
Q 002285 523 ------WNITEVASSIGYALN----MP-----ADEREKRHLHNFM-HVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 523 ------~D~~~lA~aI~~aL~----m~-----~~er~~r~~~~~~-~v~~~~~~~W~~~fl~~L~ 571 (942)
.|.++|-+.|.+.+- .. +.+-.++++++.. ..-.+++.+.++.+++.+.
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455666666644332 10 2234444444332 2346788888887777665
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.9e-08 Score=109.65 Aligned_cols=144 Identities=19% Similarity=0.178 Sum_probs=92.5
Q ss_pred CCceE-EEee-cccccC-CHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCc
Q 002285 373 GRKVM-LGVD-RLDMIK-GIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449 (942)
Q Consensus 373 ~~~iI-l~Vg-RLd~~K-Gi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~ 449 (942)
++++| +..| |....| ++..+++|++.+.+++|+++ +++++ ++++. ++++++++.+.. + .
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~----~~~~~----~~~~~~~~~~~~---~---~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPL----VNPKR----REQIEEALAEYA---G---L 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEec----CChhh----HHHHHHHHhhcC---C---C
Confidence 44543 4434 776654 47899999999988888743 44443 12232 233444433220 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEe-----------------CCCCcccc
Q 002285 450 VPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILS-----------------EFAGAAQS 512 (942)
Q Consensus 450 ~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-----------------e~~G~~~~ 512 (942)
.+.++. .++..+|+.||+++++| |.+.+|+|+| +.|+|++ .+.|.++.
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~----G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL----KVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh----CCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 133332 47899999999999998 7888999999 3567776 34444555
Q ss_pred cC----CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002285 513 LG----AGAILVNPWNITEVASSIGYALNMPADEREKRHLHN 550 (942)
Q Consensus 513 lg----~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 550 (942)
+. ..+++.+..|.++++++|..+|+++ +.++++.+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 52 2346778889999999999999864 3454444443
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.7e-07 Score=108.09 Aligned_cols=107 Identities=9% Similarity=0.037 Sum_probs=71.9
Q ss_pred HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-------CCceEEE-CC--CC----HHHH
Q 002285 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-------GAGAILV-NP--WN----ITEV 528 (942)
Q Consensus 463 el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-------g~~gllV-nP--~D----~~~l 528 (942)
++..+.+.+|+.|+||.||.+|.+++|+.|. +-|.|.|+.+|....+ ...|+.| +- .+ ++++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~----gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~l 537 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF----GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQL 537 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT----T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc----CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHH
Confidence 6788899999999999999999999999998 3478999999877544 1356654 32 22 4667
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 529 ASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
++.|.....++..+|.....+..+.....++.+...-+.+.-..+
T Consensus 538 a~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 538 ADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 777777788988777776666666666777777666665544433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.3e-07 Score=86.83 Aligned_cols=62 Identities=19% Similarity=0.245 Sum_probs=48.1
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
+++||+||||++...... ......+.+++.+.|++|.+ .|..++|+|||....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcC
Confidence 479999999998732100 00134678999999999997 489999999999999998887754
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-06 Score=91.39 Aligned_cols=172 Identities=18% Similarity=0.251 Sum_probs=103.4
Q ss_pred HHHHHHHhhhCCCCeEEEEcCCChhhHHHhhc-cc----CceEEeecceEEEeCCC-ceeecccCCCChhHHHHHHHHHH
Q 002285 638 LKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFG-EY----NMWLAAENGMFLRLTTG-EWMTTMPENLNMDWVDSVKHVFE 711 (942)
Q Consensus 638 ~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~-~~----~l~liaehG~~ir~~~~-~w~~~~~~~~~~~w~~~v~~il~ 711 (942)
+.+.|++|.+ ...|+||||-++..+.+.+. .- -.++-++||...+..++ .|...+.+....+-++.+.+.+.
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678999986 79999999999999998884 32 24799999998875443 45433211111111222222222
Q ss_pred HHHhc-----CCCeeeeeecceEEEEE--eccchH----HhH----HH-HHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 002285 712 YFTER-----TPRSHFEVRETSLVWNY--KYADLE----FGR----LQ-ARDILQHLWSGPISNASVDVVQ-GGRSVEVR 774 (942)
Q Consensus 712 ~~~~r-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~~----~q-a~el~~~L~~~~~~~~~v~v~~-G~~~vEV~ 774 (942)
.|... ..|.+||.+...+.+.- |+|+.+ |.. .. -+.+.+.| ...+...++++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 22221 34889999999988763 333211 110 00 12344455 3333455677655 57899999
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC---CCCCCHHHHHhc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH---FLQKDEDIYTFF 821 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD---~d~nDEdMF~~~ 821 (942)
|+||+|.-++++|.+. ..+.++|||| -+.||-++|...
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~ 198 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP 198 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC
Confidence 9999999999987553 2688999999 235788888653
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.7e-06 Score=78.70 Aligned_cols=87 Identities=29% Similarity=0.405 Sum_probs=71.7
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEe-CCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH 549 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 549 (942)
|++.|+..+|+++..+|+||| |.++++ ...+....+ |..++.++ |+++++++|..+|++ +++|++..++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~-~~~~~~ia~~ 72 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLEN-PEERRRIAKN 72 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCC-HHHHHHHHHH
Confidence 467788899999999999999 554444 455777767 56788888 999999999999985 5688888888
Q ss_pred HhHHHH-hcCHHHHHHHHH
Q 002285 550 NFMHVT-THTSQEWAATFV 567 (942)
Q Consensus 550 ~~~~v~-~~~~~~W~~~fl 567 (942)
++++|. .|++.+-+++||
T Consensus 73 a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 73 ARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHHhCCHHHHHHHHH
Confidence 998886 889888888776
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00012 Score=84.59 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=82.7
Q ss_pred CCceEEEe--ecccc-cCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCc
Q 002285 373 GRKVMLGV--DRLDM-IKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449 (942)
Q Consensus 373 ~~~iIl~V--gRLd~-~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~ 449 (942)
++++|+.+ +|..+ .|+++.+++|++.+.+.+|+++ ++..+. ++... +.++++....+. +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~----~~~~~----~~~~~~~~~~~~-----~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVV----NFKRR----LQFEQIKAEYGP-----D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeC----CchhH----HHHHHHHHHhCC-----C-
Confidence 55655433 59888 7999999999999998888854 332222 22211 122233222211 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeC-----------------CCCcccc
Q 002285 450 VPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSE-----------------FAGAAQS 512 (942)
Q Consensus 450 ~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe-----------------~~G~~~~ 512 (942)
..|.++.+ +...+|++||++|.+| |.+.+|+|+| +-|+|++. +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~----G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALI----KTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHc----CCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 12444432 4567999999999999 7778899999 34666662 2222222
Q ss_pred c-CCceE--EE-CCCCHHHHHHHHHHHhCCC
Q 002285 513 L-GAGAI--LV-NPWNITEVASSIGYALNMP 539 (942)
Q Consensus 513 l-g~~gl--lV-nP~D~~~lA~aI~~aL~m~ 539 (942)
+ +..++ ++ .-.+++.+++++.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2 22221 11 3356889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=81.45 Aligned_cols=184 Identities=17% Similarity=0.283 Sum_probs=118.8
Q ss_pred hhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc--C-
Q 002285 596 SYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--N- 672 (942)
Q Consensus 596 ~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~- 672 (942)
++++-..-|+.||.||||++. ...++|++.+.|++|.. ..++-+|-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 345556679999999999986 45789999999999875 7899999999998888777543 2
Q ss_pred -ceEEeecceEEEeCCCceeecccCCCChhHH--HHHHHHH----HHHHhc----CCCeeeeeecceEEEEE--eccchH
Q 002285 673 -MWLAAENGMFLRLTTGEWMTTMPENLNMDWV--DSVKHVF----EYFTER----TPRSHFEVRETSLVWNY--KYADLE 739 (942)
Q Consensus 673 -l~liaehG~~ir~~~~~w~~~~~~~~~~~w~--~~v~~il----~~~~~r----~~Gs~iE~K~~sl~~hy--r~ad~e 739 (942)
.+.-+|||..-...+...- ...-..|. +.+++++ .+..+- ..|.+||-+...+.+.- |++..|
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4788999998765443211 00111222 2223332 222221 34888988776665442 333221
Q ss_pred ----HhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 740 ----FGR-----LQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 740 ----~~~-----~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
|.. ..-..+.+.| ++-+...++...- |.-.++|-|.||+|--.++++-+. + .+.+-+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 211 1112344445 3334556777544 567899999999999998877554 3 678999999
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00047 Score=78.34 Aligned_cols=174 Identities=21% Similarity=0.287 Sum_probs=114.9
Q ss_pred hhhHHHHHHHHHHhcC-CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHH
Q 002285 358 PQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEI 436 (942)
Q Consensus 358 ~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~l 436 (942)
+........+|.++++ +++++..+. ...--...++++..+++++|+.. ||.| | ..||. -..++++
T Consensus 214 ~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~l----lIlV--P---RHpER---f~~v~~l 279 (419)
T COG1519 214 PQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLL----LILV--P---RHPER---FKAVENL 279 (419)
T ss_pred hhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCce----EEEe--c---CChhh---HHHHHHH
Confidence 3445567788888877 888888776 33334458899999999999853 3322 3 34543 4567777
Q ss_pred HHhhccccCCcC-------cccEEEeCCCCCHHHHHHHHHHccEEEECCCC---CCCChhHHHHHhhccCCCceEEEeC-
Q 002285 437 VGRINGRYGTLT-------TVPIHHLDRSLDFHALCALYAITDVALVTSLR---DGMNLVSYEFVACQASKKGVLILSE- 505 (942)
Q Consensus 437 v~~IN~~~~~~~-------~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~---EG~~Lv~lEamA~~~~~~G~lIlSe- 505 (942)
+.+.+-++..-. -.+|. +.. +.-||..+|+.|||+++--.. -|.| ++|+.++ +.|+|.-.
T Consensus 280 ~~~~gl~~~~rS~~~~~~~~tdV~-l~D--tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~----~~pvi~Gp~ 350 (419)
T COG1519 280 LKRKGLSVTRRSQGDPPFSDTDVL-LGD--TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAF----GTPVIFGPY 350 (419)
T ss_pred HHHcCCeEEeecCCCCCCCCCcEE-EEe--cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHc----CCCEEeCCc
Confidence 777766654311 12343 222 256999999999999885433 4566 7899998 23455433
Q ss_pred ---CCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 506 ---FAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 506 ---~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
|.-+++.+ ..+|+.|+ |.+.+++++..++++ +++|.++.++....+.++
T Consensus 351 ~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 351 TFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred cccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 33444444 24567776 478888888887775 778888888888888665
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00026 Score=82.85 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=90.6
Q ss_pred HHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 390 PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 390 ~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
...|+|++.+.+..|++. +-+ |.++ + ...+|.++ .+ +. .|+.+.+ +...++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~--f~I---ga~t--e------~s~kL~~L-~~----y~-----nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH--FHI---AALT--E------MSSKLMSL-DK----YD-----NVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE--EEE---EecC--c------ccHHHHHH-Hh----cC-----CcEEECC-cChHHHHHHHH
Confidence 999999999999999975 433 3332 2 11334444 22 11 2444444 44567899999
Q ss_pred HccEEEECCCCCCCChhHHHHHhhccCCCceEEEe-C-CCCcccccCCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 470 ITDVALVTSLRDGMNLVSYEFVACQASKKGVLILS-E-FAGAAQSLGAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 470 ~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e-~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
.||+++.+|..||+++++.||+.. |.+|+| + ..|..+.+ ..|.+|++.|+++++++|.++|+++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999996 776666 3 34655555 56999999999999999999998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.8e-06 Score=82.88 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=53.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH---Hhhcc-------cC-
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD---DNFGE-------YN- 672 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~---~~~~~-------~~- 672 (942)
++++|+||||+..... ++...-+ ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976210 0000000 013679999999999997 69999999999998874 66655 21
Q ss_pred ceEEeecceEEE
Q 002285 673 MWLAAENGMFLR 684 (942)
Q Consensus 673 l~liaehG~~ir 684 (942)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 366777776653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.7e-05 Score=79.64 Aligned_cols=38 Identities=21% Similarity=0.110 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+|..++++++++++ .+++.++++|| ..||.+|++.++.
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 47888889999887 46788999999 9999999998865
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.7e-05 Score=82.01 Aligned_cols=37 Identities=19% Similarity=0.101 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|..+++.++++++ .+++.+++||| +.+|.+|++.++-
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 5678888999887 56789999999 9999999999975
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=3e-05 Score=75.05 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=41.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD 665 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~ 665 (942)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 5899999999986521110 124578999999999976 69999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=1.9e-05 Score=88.69 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-.|+.++++++++++ ++++.+++||| +.||.+|++.++.
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999998 67899999999 9999999999986
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00013 Score=79.78 Aligned_cols=71 Identities=14% Similarity=0.233 Sum_probs=56.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCC-ChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc----eE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKL-HPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM----WL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~l 675 (942)
..++|+||+||||++.. ...++ +|.+.++|.+|.+ .|..++|+|+++...+...+..+++ ..
T Consensus 125 ~~kvIvFDLDgTLi~~~------------~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdv 191 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDE------------EPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDI 191 (301)
T ss_pred cceEEEEecCCCCcCCC------------CccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCE
Confidence 45799999999999872 12334 4999999999998 6999999999999999888887754 25
Q ss_pred EeecceEEE
Q 002285 676 AAENGMFLR 684 (942)
Q Consensus 676 iaehG~~ir 684 (942)
|..+|...+
T Consensus 192 IIs~Gdv~~ 200 (301)
T TIGR01684 192 IISGGHKAE 200 (301)
T ss_pred EEECCcccc
Confidence 666776654
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00057 Score=74.22 Aligned_cols=64 Identities=5% Similarity=0.169 Sum_probs=50.3
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhhcccCc-----e
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNFGEYNM-----W 674 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l-----~ 674 (942)
++|+||+||||... ...+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~--------------~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKG--------------KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcC--------------CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 68999999999975 2223 478999999997 6999999995 999999888887643 2
Q ss_pred EEeecceE
Q 002285 675 LAAENGMF 682 (942)
Q Consensus 675 liaehG~~ 682 (942)
++..+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 66666664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00088 Score=70.99 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=39.0
Q ss_pred EEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 771 VEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 771 vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-....+-.|..+++.+++.+| ++.+.++++|| +.||.+||+.++.
T Consensus 136 ~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 136 VGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 3334445689999999999988 56789999999 9999999999986
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0092 Score=65.88 Aligned_cols=166 Identities=14% Similarity=0.213 Sum_probs=110.4
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhC----CCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEEN----PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~----P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
...++++--.+.+...+.-+++|+..+-++. -++- +++ ++|. |.||..+.+.++|++. +
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP-~ll-ciIT----GKGPlkE~Y~~~I~~~-----------~ 316 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLP-SLL-CIIT----GKGPLKEKYSQEIHEK-----------N 316 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCC-cEE-EEEc----CCCchhHHHHHHHHHh-----------c
Confidence 3567888889999999999999998552211 1111 232 3333 5678666666666654 3
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEE--ECCCCCC--CChhHHHHHhhccCCCc-eEEEeCCCCccccc--CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVAL--VTSLRDG--MNLVSYEFVACQASKKG-VLILSEFAGAAQSL--GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v--~pSl~EG--~~Lv~lEamA~~~~~~G-~lIlSe~~G~~~~l--g~~gllVn 521 (942)
|+.|.+..-.+.-++.+.++..||..| .||. -| +++-+....-| | |+++-.|.-..|.+ |.||++++
T Consensus 317 ~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-----glPvcA~~fkcl~ELVkh~eNGlvF~ 390 (444)
T KOG2941|consen 317 LQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-----GLPVCAVNFKCLDELVKHGENGLVFE 390 (444)
T ss_pred ccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-----CCceeeecchhHHHHHhcCCCceEec
Confidence 456777788888999999999999765 4554 34 56667777777 5 46666776555555 89999997
Q ss_pred CCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhHHHHhcCHHHHHHHHH
Q 002285 522 PWNITEVASSIGYALNM---PADEREKRHLHNFMHVTTHTSQEWAATFV 567 (942)
Q Consensus 522 P~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl 567 (942)
|.+++|+.|..+++. +..+-. +.++.+.+....+|.+...
T Consensus 391 --Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~ 433 (444)
T KOG2941|consen 391 --DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWE 433 (444)
T ss_pred --cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHH
Confidence 999999999999873 223322 2223333444566665543
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00084 Score=73.54 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=54.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCC-ChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc----eE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKL-HPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM----WL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~l 675 (942)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 357999999999998721 2223 5899999999997 6999999998888888888877643 24
Q ss_pred EeecceEEE
Q 002285 676 AAENGMFLR 684 (942)
Q Consensus 676 iaehG~~ir 684 (942)
+..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 555665443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0017 Score=66.36 Aligned_cols=65 Identities=11% Similarity=0.027 Sum_probs=40.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
-|+++||+||||++-.-.- ++.-++....+-.-...|+.|.+ .|..++|+|+.+...++..++.+
T Consensus 7 i~~~v~d~dGv~tdg~~~~----~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVI----NDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEE----cCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 6899999999999851100 00000122344455567777776 57888888888777666665543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0011 Score=64.39 Aligned_cols=64 Identities=22% Similarity=0.343 Sum_probs=47.5
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC--------hhhHHHhhcccCc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD--------RNVLDDNFGEYNM 673 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~--------~~~L~~~~~~~~l 673 (942)
|+++||+||||++.... .+ +.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 58999999999963110 00 01234678999999999986 599999999998 6777777776654
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.1 Score=59.14 Aligned_cols=264 Identities=13% Similarity=0.108 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEcCCch--hhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhc
Q 002285 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHL--MFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAA 299 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL--~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~a 299 (942)
|..|+++-+.+.. +++|++..=|+-= +.+...||+.+|++||+++. ++.+|.-=|+|...+.. .+
T Consensus 71 lk~~~~~~~~i~~------~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~ 137 (381)
T COG0763 71 LKIRRELVRYILA------NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YV 137 (381)
T ss_pred HHHHHHHHHHHHh------cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--Hh
Confidence 6666665555443 5789888777542 35789999999999999776 34456544555333322 23
Q ss_pred cEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh----cCCc
Q 002285 300 DLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF----AGRK 375 (942)
Q Consensus 300 DlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~ 375 (942)
|++.--.+--.. |.+ + .|.. ..|-|++ =.|.-.+.+ ..+.+|+++ ..+.
T Consensus 138 D~lLailPFE~~-~y~---k-~g~~-----~~yVGHp--------l~d~i~~~~---------~r~~ar~~l~~~~~~~~ 190 (381)
T COG0763 138 DHLLAILPFEPA-FYD---K-FGLP-----CTYVGHP--------LADEIPLLP---------DREAAREKLGIDADEKT 190 (381)
T ss_pred hHeeeecCCCHH-HHH---h-cCCC-----eEEeCCh--------hhhhccccc---------cHHHHHHHhCCCCCCCe
Confidence 443211110001 110 0 1100 1122221 112111111 112245555 2344
Q ss_pred eEEEee-cc-cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 376 VMLGVD-RL-DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 376 iIl~Vg-RL-d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+.+..| |- +-..-.+.+++|++++.+++|+.+ +++- . --+.|+.++.+ ....-... ..++
T Consensus 191 lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~--~vlp-----~--~~~~~~~~~~~---~~~~~~~~------~~~~ 252 (381)
T COG0763 191 LALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK--FVLP-----L--VNAKYRRIIEE---ALKWEVAG------LSLI 252 (381)
T ss_pred EEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce--EEEe-----c--CcHHHHHHHHH---HhhccccC------ceEE
Confidence 445444 43 344667888899999999999976 4333 1 11233333222 22111000 0122
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC-Cccccc----C-----------Cce
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA-GAAQSL----G-----------AGA 517 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~-G~~~~l----g-----------~~g 517 (942)
+...+....+.+||+.+..| |.+.+|++.| +.|.|++--. ...-.+ . .+-
T Consensus 253 -----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~----g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~ 318 (381)
T COG0763 253 -----LIDGEKRKAFAAADAALAAS-----GTATLEAALA----GTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR 318 (381)
T ss_pred -----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHh----CCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC
Confidence 22457788899999999999 7999999999 3565544322 222211 0 011
Q ss_pred EEEC-----CCCHHHHHHHHHHHhCCCHH--HHHHHHHHHhHHHHhc
Q 002285 518 ILVN-----PWNITEVASSIGYALNMPAD--EREKRHLHNFMHVTTH 557 (942)
Q Consensus 518 llVn-----P~D~~~lA~aI~~aL~m~~~--er~~r~~~~~~~v~~~ 557 (942)
.+|+ -..++.+|+++..++.++.. +..+..+.+.+.+.+.
T Consensus 319 ~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 319 EIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred ccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 1121 12478889999998887621 2223334455555544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.005 Score=59.91 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=43.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC-ChhhHHHhhcc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS-DRNVLDDNFGE 670 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR-~~~~L~~~~~~ 670 (942)
|+|++|+||||++.-...- ....+- ....+.+.+.+.|+.|.+ .|..++|+|++ +.......+..
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 5899999999998621000 000000 000357899999999987 58999999999 67666555543
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0029 Score=69.08 Aligned_cols=52 Identities=17% Similarity=0.219 Sum_probs=40.3
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHH
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDD 666 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~ 666 (942)
++|+||+||||..... + ...+.|.+.++|++|.+ .|..++++|||+....+.
T Consensus 2 k~i~~D~DGtl~~~~~-~----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYISDA-K----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEeCCC-c----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHH
Confidence 6899999999997511 0 11267799999999997 599999999987775433
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0039 Score=67.76 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=44.7
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
++|+||+||||... . .+.|.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 2 ~~v~~DlDGtL~~~--------------~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHD--------------N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeC--------------C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999975 2 467899999999997 69999999999997776666654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.026 Score=62.23 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
.|..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 46788899999887 45788999999 888877666654
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.00026 Score=86.65 Aligned_cols=219 Identities=13% Similarity=0.073 Sum_probs=129.8
Q ss_pred CCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh---
Q 002285 587 SLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV--- 663 (942)
Q Consensus 587 ~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~--- 663 (942)
.++..++.......+.-|.++|+||||-.++.+| ..+.++..++.+-.+..+ ....+++|||.+..
T Consensus 174 pfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~ 242 (732)
T KOG1050|consen 174 PFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVK 242 (732)
T ss_pred CCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeeee
Confidence 4456677777777777899999999999998888 355566666666666554 33456799999665
Q ss_pred -------HHHhhcccCceEEeecceEEEeC--CCceeecccCCC-----ChhHHHHHHHHHHHHHhc-------------
Q 002285 664 -------LDDNFGEYNMWLAAENGMFLRLT--TGEWMTTMPENL-----NMDWVDSVKHVFEYFTER------------- 716 (942)
Q Consensus 664 -------L~~~~~~~~l~liaehG~~ir~~--~~~w~~~~~~~~-----~~~w~~~v~~il~~~~~r------------- 716 (942)
..++.+..+++.+++||.+++.. ++...... +.. ...+.....+.++.|-+-
T Consensus 243 ~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgv-D~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~ 321 (732)
T KOG1050|consen 243 ALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGV-DRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPK 321 (732)
T ss_pred ecccccchHHhhccccchhHHHHHHHHhhhccCCceEecc-cccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCC
Confidence 77777777899999999999842 22211111 111 112333344444433221
Q ss_pred -CCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcc
Q 002285 717 -TPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISN-ASVDVVQGGRSVEVRA-VGVTKGAAIDRILGEIVR 793 (942)
Q Consensus 717 -~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~-~~v~v~~G~~~vEV~p-~gvnKG~Av~~Ll~~l~~ 793 (942)
++|.-+|+-..++..||+..+..++...+ ..+ ..+... ...+...+..+.|++| ..+.||.++..+...++.
T Consensus 322 ~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~----~pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 322 RTDGKEVEELKFCVSVHVRRINEKFGSASY----QPV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cccchHHHHHHHHhHhhhhhhhhccCCccc----ceE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 11111111223334444443333322110 000 001111 1233455667899998 689999999988877764
Q ss_pred cCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 794 HKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 794 ~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
.+. ..+.=...|+|| +.+||+.+..++.+
T Consensus 397 ~~~-~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 397 ENK-KSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred ccc-CCceEEeeeccc-cccccccCEEECCc
Confidence 320 112234589999 99999999999886
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.014 Score=62.85 Aligned_cols=81 Identities=7% Similarity=0.002 Sum_probs=53.0
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCcc---------------------ccCCCCCChhHHHHHHHhhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQI---------------------REMEPKLHPDLKEPLKRLCD 647 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~---------------------~~~~~~~~~~~~~aL~~L~~ 647 (942)
+++++.+.....+...|+||+||||++..+.-. .+.+. ......+-+.+.+.|..|.+
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~-~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~ 128 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFW-RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHh-CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH
Confidence 466777777766777999999999998754100 01000 01122344458999999987
Q ss_pred CCCCeEEEEcCC----ChhhHHHhhccc
Q 002285 648 DPMTTVVVLSGS----DRNVLDDNFGEY 671 (942)
Q Consensus 648 d~g~~V~IvSGR----~~~~L~~~~~~~ 671 (942)
.|.+++|||+| ....++.+++.+
T Consensus 129 -~G~~i~iVTnr~~~k~~~~a~~ll~~l 155 (237)
T TIGR01672 129 -RGDAIFFVTGRTPGKTDTVSKTLAKNF 155 (237)
T ss_pred -CCCEEEEEeCCCCCcCHHHHHHHHHHh
Confidence 69999999999 444555555443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.025 Score=61.36 Aligned_cols=96 Identities=22% Similarity=0.353 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCC------CCeEEEEeccC-CCC---hhHhh--cCC
Q 002285 220 SQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNN------NMKVGWFLHTP-FPS---SEIHR--TLP 287 (942)
Q Consensus 220 ~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p------~~~I~~flH~P-fP~---~e~fr--~lp 287 (942)
+....|.-+++.-++.+...-..+||||+||||..++|.+||.... ++++.+++|.. |.. .+.+. .+|
T Consensus 111 d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~ 190 (245)
T PF08323_consen 111 DNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLP 190 (245)
T ss_dssp THHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-G
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCC
Confidence 3344555455555554444322789999999999999999998764 59999999974 321 11111 123
Q ss_pred ch--------------HHHHHHhhhccEEeecCHHHHHHHHH
Q 002285 288 SR--------------TELLRSVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 288 ~r--------------~~il~~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
+. .-+-.|+..||.|..-++.|++..++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 21 24557888999999999999876544
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0063 Score=68.35 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=42.2
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
.++|+||+||||... . .+-|.+.++|++|.+ .|.+++++|+|+......++..
T Consensus 28 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 28 VETFIFDCDGVIWKG--------------D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred CCEEEEeCcCCeEeC--------------C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHH
Confidence 578999999999975 2 345788999999997 5999999999996555554433
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.026 Score=59.43 Aligned_cols=38 Identities=11% Similarity=-0.025 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-|...+.+++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 139 p~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 139 PDPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CCcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 46788899999987 45789999999 9999998888764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.054 Score=59.70 Aligned_cols=41 Identities=15% Similarity=-0.013 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+-.|...++.+++.++ ++++.+++||| ..+|..+-+.++-
T Consensus 155 ~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aGi 195 (272)
T PRK13223 155 QKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAGV 195 (272)
T ss_pred CCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCCC
Confidence 34456778999999987 56789999999 9999999877753
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.0077 Score=66.54 Aligned_cols=49 Identities=16% Similarity=0.244 Sum_probs=38.1
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHH
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDD 666 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~ 666 (942)
.++|+||+||||... . .+-+.+.++|++|.+ .|..++++|||+......
T Consensus 2 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~ 50 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG--------------E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAE 50 (279)
T ss_pred ccEEEEeCCCceEcC--------------C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHH
Confidence 468999999999874 1 244569999999987 699999999987544433
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.72 E-value=1.9 Score=49.64 Aligned_cols=235 Identities=19% Similarity=0.238 Sum_probs=124.1
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
+++|+|..=||-=+ .+.+.+|++++..+|.++. ++.+|.-=++|...++.. +|.+.- .+.+-..|.+.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-ifPFE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-IFPFEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-CCcccHHHHhc--
Confidence 47899888887643 5789999999888888775 345665555665544432 232210 00000111110
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceE-EEee-cccccCC-HHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVM-LGVD-RLDMIKG-IPQKI 393 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI-l~Vg-RLd~~KG-i~~lL 393 (942)
.|+. ..|-|++ =+|.-... .. ....++.+ .++++| +.-| |-...|- ++.++
T Consensus 151 --~g~~-----~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 0100 1222221 12221111 00 11122222 344443 4444 7666654 58899
Q ss_pred HHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccE
Q 002285 394 LAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDV 473 (942)
Q Consensus 394 ~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv 473 (942)
+|++++.+++|+++ ++....+ ..+ .+.+++.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~-----~~~---~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAP-----EVH---EELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCC-----HHH---HHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999964 3322222 111 22233333222211 123222 3466788999999
Q ss_pred EEECCCCCCCChhHHHHHhhccCCCce-EEEeCCC----------------Cccccc-CCc---eEEECCCCHHHHHHHH
Q 002285 474 ALVTSLRDGMNLVSYEFVACQASKKGV-LILSEFA----------------GAAQSL-GAG---AILVNPWNITEVASSI 532 (942)
Q Consensus 474 ~v~pSl~EG~~Lv~lEamA~~~~~~G~-lIlSe~~----------------G~~~~l-g~~---gllVnP~D~~~lA~aI 532 (942)
.+++| |.+.+|++..+ .| ||+-... |..-.+ |.. -++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 79999998882 45 4443332 222222 111 1222446899999999
Q ss_pred HHHhCCCHH
Q 002285 533 GYALNMPAD 541 (942)
Q Consensus 533 ~~aL~m~~~ 541 (942)
..+|.+++.
T Consensus 335 ~~ll~~~~~ 343 (373)
T PF02684_consen 335 LELLENPEK 343 (373)
T ss_pred HHHhcCHHH
Confidence 999987643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=95.71 E-value=1.8 Score=49.86 Aligned_cols=71 Identities=23% Similarity=0.191 Sum_probs=50.3
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHH
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVAS 530 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l---g~~gllVnP~D~~~lA~ 530 (942)
.+.+.++..++.+|++.||++|-.|. |.. .||.+. |+++++ . |-.++. |.+.++| +.|.+++.+
T Consensus 265 ~l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~l-----g~Pvv~-l-~~R~e~~~~g~nvl~v-g~~~~~I~~ 331 (365)
T TIGR03568 265 RLFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSF-----GVPTIN-I-GTRQKGRLRADSVIDV-DPDKEEIVK 331 (365)
T ss_pred EEECCCChHHHHHHHHhCCEEEEcCh----hHH-Hhhhhc-----CCCEEe-e-cCCchhhhhcCeEEEe-CCCHHHHHH
Confidence 35688999999999999999995442 222 899998 543332 1 223332 5566767 678999999
Q ss_pred HHHHHhC
Q 002285 531 SIGYALN 537 (942)
Q Consensus 531 aI~~aL~ 537 (942)
++.++++
T Consensus 332 a~~~~~~ 338 (365)
T TIGR03568 332 AIEKLLD 338 (365)
T ss_pred HHHHHhC
Confidence 9999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.018 Score=58.76 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=37.6
Q ss_pred CCEEEEEecCCccCCCCC-ccCCCCCccccCCCC-CChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 601 NNRLLILGFNATLTAPVD-FLGRRGGQIREMEPK-LHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~-~P~~~~~~~~~~~~~-~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
..|+++||+||||+.... .+ . -+.+ .+-+ +-|.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~--~-~~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV--F-PTSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc--c-cCCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 357899999999997421 00 0 0000 1112 45889999999987 6999999997554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=95.57 E-value=2.6 Score=48.22 Aligned_cols=243 Identities=15% Similarity=0.080 Sum_probs=120.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|.||.=-.-.++..+....-++||++.... .-+.++. -|.-+++.|.+. -||+----+..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-lRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-LRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC-CCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 6799999966655666555555668898855433 1111221 122344444432 256665566666666543
Q ss_pred HhccccCCCceecCCeeeEEEEee-CccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeeccccc---CCHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFP-IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMI---KGIPQKILA 395 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP-~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~---KGi~~lL~A 395 (942)
.|. ...+|.++. .++|.-........+.. ....+-....++.+++..-|.... .....++.+
T Consensus 140 -~G~-----------~~~rI~~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGE-----------PPERIFVVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCC-----------CCCeEEEEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 222 233455443 35665322211111110 011221122344444555454433 456788888
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
++.+.+. +++ .+|....+ -| .....+.+...+++ .++ +..+++..++..+++.|+++|
T Consensus 206 l~~L~~~-~~~----~vi~~~hn----~p---~~~~~i~~~l~~~~---------~v~-~~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QNV----PVIFPLHN----NP---RGSDIIIEKLKKYD---------NVR-LIEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT-T---------TEE-EE----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CCC----cEEEEecC----Cc---hHHHHHHHHhcccC---------CEE-EECCCCHHHHHHHHhcceEEE
Confidence 8888776 553 33333221 11 12333433333321 244 346788999999999999998
Q ss_pred ECCCCCCCChhHH-HHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCC
Q 002285 476 VTSLRDGMNLVSY-EFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNM 538 (942)
Q Consensus 476 ~pSl~EG~~Lv~l-EamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 538 (942)
--|- .+. ||..+ +.|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 264 gdSs------GI~eEa~~l----g~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSL----GKPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGG----T--EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHh----CCeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 8772 355 99998 2355555556666554 23455566 8999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.021 Score=56.58 Aligned_cols=70 Identities=20% Similarity=0.324 Sum_probs=44.6
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCce
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMW 674 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~ 674 (942)
.+.||+++|.||||++-.=.-+..+..++. ..-.---.|+.|.+ .|++|+|+|||.-.-++...+.+++-
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~Ka----Fnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKA----FNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeee----eeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 467999999999999842111001122221 11111234555554 59999999999999999988886543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.012 Score=60.30 Aligned_cols=52 Identities=10% Similarity=0.162 Sum_probs=38.6
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
+++|||.||||+...+.. +. ..+..+.|.+.++|++|.+ .|.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~~--~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----HE--IDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----CC--HHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999532211 00 0345678899999999987 6899999997643
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=1.3 Score=55.33 Aligned_cols=150 Identities=11% Similarity=0.140 Sum_probs=103.7
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++++-|+..-|-... +|..++++. ..+|+.. ..+++|.-|.+..++.. -+.+-+.|..++.-||..-...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccChhhcC
Confidence 4567788999999998888 777766553 3455421 12566655555555544 34566777788887776544344
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-.-+|++ |.-|..-+=||.- |++.+|..-|+..++ +.+++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 45688775 45566667889999999999984 7778777888774 999999999877665 46788886
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. ..+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 4 4555544
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.025 Score=56.25 Aligned_cols=53 Identities=19% Similarity=0.077 Sum_probs=38.2
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
++++||+||||++..... ..+.. ...++-|.+.++|+.|.+ .|..++|+|..+
T Consensus 1 ~~~~~d~dgtl~~~~~~~---~~~~~-~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD---YPRSL-DDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc---cCCCH-HHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 368999999999863200 00000 123578899999999997 699999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.048 Score=54.12 Aligned_cols=92 Identities=17% Similarity=0.237 Sum_probs=44.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch-----HHHHHH-hhhccEEeecCHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR-----TELLRS-VLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r-----~~il~~-ll~aDlIgF~t~~~~~~Fl~ 315 (942)
++|+||+|.++...+..+... +.++.+++|.+++.........+. ..+... ...+|.|..-+...++.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 789999999887765543332 789999999977421111111111 111111 23567766555444333322
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCccCccccc
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFV 352 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~ 352 (942)
++ -...++.++|||||.+.|+
T Consensus 157 -----~~-----------~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FG-----------IPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hC-----------CcccCCEEEECCccHHHcC
Confidence 11 2347899999999999884
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.052 Score=55.46 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=46.7
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC-hhhHHHhhcccCc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD-RNVLDDNFGEYNM 673 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~-~~~L~~~~~~~~l 673 (942)
.-..+++++|+||||+.. ....+.+.+.+.|+.|.+ .|..++|+|+.+ ...++.++..+++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~-------------~~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP-------------DHNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HCCCCEEEEecCCccccC-------------CCCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 346689999999999976 233678899999999986 589999999998 4555555444443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.066 Score=53.82 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=58.2
Q ss_pred hhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceE
Q 002285 596 SYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWL 675 (942)
Q Consensus 596 ~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 675 (942)
..++...+-|++|+|-||++. .....+|++++-+.++.. .|..|+|+|--+..-+..+...+++.+
T Consensus 22 ~L~~~Gikgvi~DlDNTLv~w-------------d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 22 ILKAHGIKGVILDLDNTLVPW-------------DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred HHHHcCCcEEEEeccCceecc-------------cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 345567789999999999998 345679999999999997 699999999999999999988888776
Q ss_pred Ee
Q 002285 676 AA 677 (942)
Q Consensus 676 ia 677 (942)
|.
T Consensus 88 i~ 89 (175)
T COG2179 88 IY 89 (175)
T ss_pred ee
Confidence 64
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=95.01 E-value=1.9 Score=48.63 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=88.0
Q ss_pred cccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCH
Q 002285 382 RLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDF 461 (942)
Q Consensus 382 RLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~ 461 (942)
.=|++-++...|+++.+.+. .+ +.++ +|- +.+..++++.++|.+.+.++ |+.. .+..+..+++.
T Consensus 193 Sgd~sNnHieaL~~L~~~~~--~~----~kIi---vPL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf 256 (360)
T PF07429_consen 193 SGDPSNNHIEALEALKQQFG--DD----VKII---VPL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPF 256 (360)
T ss_pred CCCCCccHHHHHHHHHHhcC--CC----eEEE---EEC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCH
Confidence 66888889888888776442 22 2222 121 22222456677787777665 3321 24457889999
Q ss_pred HHHHHHHHHccEEEECCCC-CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEE----CCCCHHHHHHHHHHHh
Q 002285 462 HALCALYAITDVALVTSLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVASSIGYAL 536 (942)
Q Consensus 462 ~el~aly~~ADv~v~pSl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllV----nP~D~~~lA~aI~~aL 536 (942)
+|+.++++.+|++++...| .|+|..++ .+.+ +.++++|+-.-....+-.-++.| +.-|...+++|=+++.
T Consensus 257 ~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~----G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 257 DEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL----GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred HHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc----CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHh
Confidence 9999999999999999987 79987654 2344 35799998877776663334433 4456666666655554
Q ss_pred C
Q 002285 537 N 537 (942)
Q Consensus 537 ~ 537 (942)
.
T Consensus 332 ~ 332 (360)
T PF07429_consen 332 N 332 (360)
T ss_pred h
Confidence 3
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.07 Score=57.53 Aligned_cols=71 Identities=7% Similarity=0.008 Sum_probs=46.6
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCc---------c------------ccCCCCCChhHHHHHHHhhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQ---------I------------REMEPKLHPDLKEPLKRLCD 647 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~---------~------------~~~~~~~~~~~~~aL~~L~~ 647 (942)
+++++.+.....+...|.||+|||+++..+..- .+.+ + ......+-+.+++.|+.|.+
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~-~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~ 128 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFW-RGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK 128 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCccccCCchhe-eeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH
Confidence 455556555444455899999999997432110 0000 0 01234566679999999986
Q ss_pred CCCCeEEEEcCCCh
Q 002285 648 DPMTTVVVLSGSDR 661 (942)
Q Consensus 648 d~g~~V~IvSGR~~ 661 (942)
.|..+++||||+.
T Consensus 129 -~G~~I~iVTnR~~ 141 (237)
T PRK11009 129 -RGDSIYFITGRTA 141 (237)
T ss_pred -CCCeEEEEeCCCC
Confidence 6999999999973
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.039 Score=55.94 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=38.2
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
+++|||.||||......+ ...+.+ ....+-|.+.++|++|.+ .|..++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 689999999999843211 111111 234577899999999997 58999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=94.42 E-value=3.5 Score=51.64 Aligned_cols=150 Identities=13% Similarity=0.127 Sum_probs=102.8
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++.+-|+..-|-... +|..+.++. ..+|+.. ..+++|.-|.+..++.. -+++-+.|..++..||..-...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccChhcCC
Confidence 5567889999999998887 666655443 3355421 12556655555545543 24566778888888887544445
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-...|++ |.-|..-+=||.- |.+.+|..-|+..++ | .+++++-
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhc-----CceeeecccchhHHHHHHhCcCcEEEeC
Confidence 55688775 34556666789999999999984 7777777788774 999999998887665 3 5788875
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. +.+++.+
T Consensus 682 ~-~~~ev~~ 689 (797)
T cd04300 682 L-TAEEVEA 689 (797)
T ss_pred C-CHHHHHH
Confidence 3 4555543
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.027 Score=52.47 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=38.4
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh---hhHHHhhcccCce
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR---NVLDDNFGEYNMW 674 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~---~~L~~~~~~~~l~ 674 (942)
|+||+||||... ..+-|.+.++|++|.+ .|.+++++|-.+. ..+.+.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999974 2456889999999998 5899999987654 4444444444444
|
... |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.041 Score=55.67 Aligned_cols=53 Identities=15% Similarity=0.262 Sum_probs=32.9
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG 658 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG 658 (942)
|+.+||+||||+.... +..-.+-+.+-.-.++.+.++|++|.+ .|..|+|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 5789999999986521 000001111122356789999999987 5999999985
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.13 Score=50.08 Aligned_cols=84 Identities=18% Similarity=0.102 Sum_probs=42.5
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHH----HH-HHhhhccEEeecCHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTE----LL-RSVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~----il-~~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
.++|+||+|+++..++..++++. .++|+.+.+|..+.... .++... +. ..+..||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 48899999998877777777633 37999999997543211 112111 22 3344688888888766665543
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCc
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIG 345 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~G 345 (942)
++....+|.++|||
T Consensus 147 ----------------~g~~~~ri~vipnG 160 (160)
T PF13579_consen 147 ----------------YGVPPDRIHVIPNG 160 (160)
T ss_dssp ----------------H---GGGEEE----
T ss_pred ----------------hCCCCCcEEEeCcC
Confidence 12235688999997
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.32 Score=51.74 Aligned_cols=34 Identities=12% Similarity=-0.006 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 782 AAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 782 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
..+..+++.++ .+++.++++|| ..+|..|=+.++
T Consensus 149 ~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 149 EPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 45566777777 34568999999 999999988886
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.1 Score=58.00 Aligned_cols=67 Identities=19% Similarity=0.125 Sum_probs=49.2
Q ss_pred CCEEEEEecCCccCCCCCc-cCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 601 NNRLLILGFNATLTAPVDF-LGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~-P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
+.+++++|+||||...... | .+-....+..+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP---YDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc---cchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 4578999999999986431 0 000001244678999999999987 59999999999998887766654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.088 Score=60.04 Aligned_cols=55 Identities=13% Similarity=0.093 Sum_probs=40.6
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
+++++|||.||||+...... ...+.+ ....+.|.+.+.|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863210 011111 356789999999999976 68999999984
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=4.5 Score=50.60 Aligned_cols=150 Identities=13% Similarity=0.105 Sum_probs=101.3
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++++-|+..-|-... +|..+.++. ..+|+.. .-+++|.-|....++.. -+.+-+.|..++..||..-...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhcCChhhCC
Confidence 4456778999999998777 666655543 2356521 12556655555545543 24566778888888876544344
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-.-.|++ |.-|..-+=||.- |++.+|..-|+.-++ +.+++++-
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amN-----GaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhc-----CceeeecccchHHHHHHHhCcCcEEEeC
Confidence 45688765 45566667889999999999984 7777777777774 999999999986554 46788886
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. +.+++.+
T Consensus 681 ~-~~~ev~~ 688 (798)
T PRK14985 681 H-TVEQVKA 688 (798)
T ss_pred C-CHHHHHH
Confidence 4 3555443
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.083 Score=54.31 Aligned_cols=53 Identities=19% Similarity=0.073 Sum_probs=39.1
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
.|+++||.||||...... ..... ....+-|.+.++|++|.+ .|..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 479999999999755311 11111 134577899999999997 589999999876
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.21 Score=50.94 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=49.2
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCC-eEEEEcCCC-------hhhHHHhh
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT-TVVVLSGSD-------RNVLDDNF 668 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~-~V~IvSGR~-------~~~L~~~~ 668 (942)
.++...|.|+||.|.||++. ....++++..+.+.++.+.-+. .|+|+|-.. ...++.+-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 56778899999999999986 3567899999999999975332 599999873 44455544
Q ss_pred cccCceE
Q 002285 669 GEYNMWL 675 (942)
Q Consensus 669 ~~~~l~l 675 (942)
..+++.+
T Consensus 103 ~~lgIpv 109 (168)
T PF09419_consen 103 KALGIPV 109 (168)
T ss_pred HhhCCcE
Confidence 4445443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.09 Score=53.85 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=39.2
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
+..|+|++|.||||.....-. ......+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~-------~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH-------YPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC-------CHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 356899999999997552100 00234567899999999987 589999999864
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=93.15 E-value=2.5 Score=49.95 Aligned_cols=172 Identities=13% Similarity=0.112 Sum_probs=89.1
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
+..++.+..++ .|=-+..++.+.++|+.-|+-+ |++...+. .+. +.+.+.+.+. |. +-..|
T Consensus 284 d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~------~~l~~~~~~~----Gv-~~~Ri 344 (468)
T PF13844_consen 284 DAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE------ARLRRRFAAH----GV-DPDRI 344 (468)
T ss_dssp SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH------HHHHHHHHHT----TS--GGGE
T ss_pred CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH------HHHHHHHHHc----CC-ChhhE
Confidence 44455555655 4667899999999999999854 44334332 121 2333333332 21 11236
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc-cc-----cc---CCceEEECCC
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA-AQ-----SL---GAGAILVNPW 523 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~-~~-----~l---g~~gllVnP~ 523 (942)
+| .+..+.++....|+.+||+|-|..+-| +.+.+||+.+ |++|+|-.+-. +. .| |-.-++. .
T Consensus 345 ~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-----GVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~ 415 (468)
T PF13844_consen 345 IF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-----GVPVVTLPGETMASRVGASILRALGLPELIA--D 415 (468)
T ss_dssp EE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH-----T--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred EE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc-----CCCEEeccCCCchhHHHHHHHHHcCCchhcC--C
Confidence 65 446678899999999999999977766 5688999999 88888743311 11 11 3222222 3
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH---HhcCHHHHHHHHHHHHHHh
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHV---TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v---~~~~~~~W~~~fl~~L~~~ 573 (942)
|.++..+.-.++.++ ++.++...++.++.+ .-++...|+++|...+...
T Consensus 416 s~~eYv~~Av~La~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 416 SEEEYVEIAVRLATD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 555555544444443 334444444444443 2367888888887776654
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.14 Score=61.26 Aligned_cols=55 Identities=13% Similarity=0.197 Sum_probs=39.8
Q ss_pred cCCEEEEEecCCccCCCCC---ccCCCCCccccCCC-CCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 600 SNNRLLILGFNATLTAPVD---FLGRRGGQIREMEP-KLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~---~P~~~~~~~~~~~~-~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
...|++|||+||||..... .| . -+ .+- .+.|.+.+.|++|.+ .|..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~----~-~~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFP----K-GP-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCC----C-CH-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 4568999999999996421 11 0 00 122 257899999999987 6999999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.13 Score=54.46 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHh
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTF 820 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~ 820 (942)
-.|..+++++++.++ .+.+++||| ..+|..|-++
T Consensus 154 ~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 154 GGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred ccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 468889999888765 357899999 9999998444
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.15 Score=55.07 Aligned_cols=55 Identities=15% Similarity=0.246 Sum_probs=41.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH--HhhcccC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD--DNFGEYN 672 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~--~~~~~~~ 672 (942)
.++++||+||||... ..+.|.+.++|++|.+ .|.+++|+|..+....+ +.+..++
T Consensus 8 ~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred CCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 468999999999864 2467899999999997 59999999876654433 4455443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.22 Score=52.30 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=48.6
Q ss_pred hhhhhhhhcccCCEEEEEecCCccCCCC----CccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 590 IKGAVDSYLQSNNRLLILGFNATLTAPV----DFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 590 ~~~~~~~y~~s~~rLi~lD~DGTL~~~~----~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
++.+++.+++...|+|++|+|-||++.- .+|. .........++|+.+..+.+|.+ .+..|+|||=-+.
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~ 102 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccch
Confidence 5567778889999999999999999821 1110 00000123478999999999986 6999999986544
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.57 Score=57.02 Aligned_cols=65 Identities=17% Similarity=0.326 Sum_probs=49.8
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCC-CeEEEEcCCChhhHHHhhcccCc
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPM-TTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g-~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.....+.+++..||+++.... ....+-|++.++|+.|.+ .| ..++|+||.+....+...+.+++
T Consensus 359 ~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 359 GESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3344567888889998776422 234578999999999987 57 99999999999988887776544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.18 Score=54.30 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=40.9
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcc
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGE 670 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~ 670 (942)
++||+||||.+. . .+.+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~--------------~-~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLG--------------H-KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcC--------------C-ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 578999999985 1 235589999999987 588999998 9999988877766
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=92.24 E-value=6 Score=46.09 Aligned_cols=135 Identities=16% Similarity=0.192 Sum_probs=76.8
Q ss_pred Eeecc-cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhcc---------ccCCcC
Q 002285 379 GVDRL-DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRING---------RYGTLT 448 (942)
Q Consensus 379 ~VgRL-d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~---------~~~~~~ 448 (942)
.-.|- +-.++++.+++|++.+.++ |+ +.++....+. ..+..+++.+.+. .++. .|..
T Consensus 212 pGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~-- 278 (396)
T TIGR03492 212 PGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQK-- 278 (396)
T ss_pred CCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhcc--
Confidence 34463 4457889999999998655 55 3444333222 2233343333221 1110 0000
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc------ccc---cCCceEE
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA------AQS---LGAGAIL 519 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~------~~~---lg~~gll 519 (942)
..+.++. ...++..+|+.||++|..| |-+..|+++++ .|.|+--+.+- .+. +-..++.
T Consensus 279 -~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 279 -GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred -CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 0122211 2467899999999999986 35669999982 45555542221 011 1024555
Q ss_pred ECCCCHHHHHHHHHHHhCCC
Q 002285 520 VNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 520 VnP~D~~~lA~aI~~aL~m~ 539 (942)
+...+.+.++++|..+|+++
T Consensus 346 l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred cCCCCHHHHHHHHHHHHcCH
Confidence 66678899999999999753
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.37 Score=49.31 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=30.5
Q ss_pred hhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 636 PDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 636 ~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+++.+.|+.|.+ .+..|+|+||-....++.++..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 667899999876 5999999999988888888765544
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.2 Score=53.62 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=47.3
Q ss_pred CCEEEEEecCCccCCCCCccCC--CCC------c----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh---HH
Q 002285 601 NNRLLILGFNATLTAPVDFLGR--RGG------Q----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV---LD 665 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~--~~~------~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~---L~ 665 (942)
.+-+++||+|-|+++..+.-.. .+. . +....+..-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4568999999999986321100 000 0 112455677899999999987 699999999999765 44
Q ss_pred Hhhcc
Q 002285 666 DNFGE 670 (942)
Q Consensus 666 ~~~~~ 670 (942)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 45444
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.25 Score=51.50 Aligned_cols=38 Identities=21% Similarity=0.138 Sum_probs=27.3
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.|.+.+.|..|.+ . ..++|+||.....++.++..++
T Consensus 68 ~~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~g 105 (205)
T PRK13582 68 DPLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQLG 105 (205)
T ss_pred CCCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHcC
Confidence 345777788888876 3 6788888888887777666543
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.32 Score=51.27 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+..++.++++++ .+++.+++||| +.+|.+|.+.++.
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~ 189 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGL 189 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCC
Confidence 47889999999887 56788999999 9999999888854
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.22 Score=54.70 Aligned_cols=73 Identities=10% Similarity=0.175 Sum_probs=48.0
Q ss_pred cCCEEEEEecCCccCCCCCccC-----CCC---Cc----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH--
Q 002285 600 SNNRLLILGFNATLTAPVDFLG-----RRG---GQ----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD-- 665 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~-----~~~---~~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~-- 665 (942)
.++.+|+||+|+|+++..+.-+ ..+ .. .......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567999999999997642100 000 00 011344567899999999987 59999999999855444
Q ss_pred -HhhcccCc
Q 002285 666 -DNFGEYNM 673 (942)
Q Consensus 666 -~~~~~~~l 673 (942)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55554444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.33 Score=48.33 Aligned_cols=70 Identities=20% Similarity=0.247 Sum_probs=48.6
Q ss_pred CCEEEEEecCCccCCCCCcc--CCC-CCc-c--------ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 601 NNRLLILGFNATLTAPVDFL--GRR-GGQ-I--------REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P--~~~-~~~-~--------~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
++++++||+||||+.....+ ... ..+ + ......+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 35789999999999864211 100 000 0 01223457899999999974 6999999999999998877
Q ss_pred cccC
Q 002285 669 GEYN 672 (942)
Q Consensus 669 ~~~~ 672 (942)
..++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7653
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.46 E-value=22 Score=39.87 Aligned_cols=122 Identities=17% Similarity=0.188 Sum_probs=80.5
Q ss_pred eEEEee-cccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE-EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 376 VMLGVD-RLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ-IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 376 iIl~Vg-RLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq-i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+.+-|| .=|++-.+.+.|+++.+.+.. + +.++. .+.|+ |+ +++.++|.+...++ |+.. .+.
T Consensus 147 ~tIlvGNSgd~SN~Hie~L~~l~~~~~~--~----v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~~---~~~ 209 (322)
T PRK02797 147 MTILVGNSGDRSNRHIEALRALHQQFGD--N----VKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGAE---NFQ 209 (322)
T ss_pred eEEEEeCCCCCcccHHHHHHHHHHHhCC--C----eEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCcc---cEE
Confidence 333344 668999999999999887643 2 33332 23332 22 34567777777665 4322 355
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCC-CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEE
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAIL 519 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gll 519 (942)
.+...++.+|..++++.+|+.++.=-| .|+|..++=-.. +.+++++.-.-....+-..|+-
T Consensus 210 ~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~-----G~~v~l~r~n~fwqdl~e~gv~ 271 (322)
T PRK02797 210 ILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQL-----GKPVVLSRDNPFWQDLTEQGLP 271 (322)
T ss_pred ehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHC-----CCcEEEecCCchHHHHHhCCCe
Confidence 678999999999999999999998776 899877654322 2468888766555555233443
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.31 E-value=0.18 Score=53.57 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=28.3
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+.|.+.+.|+.|.+ .|..++|+||-....++.++..+
T Consensus 73 ~~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 73 AEIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CCcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 4567777778888765 57788888888777777766653
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.55 Score=51.36 Aligned_cols=64 Identities=13% Similarity=0.242 Sum_probs=43.1
Q ss_pred CCEEEEEecCCccCCCCCccCCC--C-C-----cc-----ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH
Q 002285 601 NNRLLILGFNATLTAPVDFLGRR--G-G-----QI-----REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD 665 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~--~-~-----~~-----~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~ 665 (942)
.+-+++||+|+|+++..+.-... + . .. ....+..-|.+++..+.|.+ .|.+|+++|||+-..-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHH
Confidence 35689999999999643211100 0 0 01 11245567889999999987 69999999999865443
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.44 Score=49.00 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=49.2
Q ss_pred CEEEEEecCCccCCCCCcc-----CCCCCccc-------cCCCCCChhHHHHHHHhhhCCCCeEEEEcCC-ChhhHHHhh
Q 002285 602 NRLLILGFNATLTAPVDFL-----GRRGGQIR-------EMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS-DRNVLDDNF 668 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P-----~~~~~~~~-------~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR-~~~~L~~~~ 668 (942)
.||+.||.|+||....-.. -+..++.. .....+-|.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 4799999999999763211 00011111 1234577899999999987 69999999998 787777776
Q ss_pred cccCc
Q 002285 669 GEYNM 673 (942)
Q Consensus 669 ~~~~l 673 (942)
+.+++
T Consensus 81 ~~~~l 85 (174)
T TIGR01685 81 GTFEI 85 (174)
T ss_pred HhCCc
Confidence 65543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=90.59 E-value=37 Score=39.02 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=47.2
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc----cccc--CCceEEECCC--CHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA----AQSL--GAGAILVNPW--NIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~----~~~l--g~~gllVnP~--D~~ 526 (942)
+.++++.. .+|..||++| ..-|+ -+..|++++ +-|+|+.-..+- +..+ ...|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~----GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRA----GVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHc----CCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 44566655 5578899999 44565 578999998 245555544431 2122 1235555554 689
Q ss_pred HHHHHHHHHhC
Q 002285 527 EVASSIGYALN 537 (942)
Q Consensus 527 ~lA~aI~~aL~ 537 (942)
+++++|.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=90.39 E-value=13 Score=42.40 Aligned_cols=196 Identities=13% Similarity=0.144 Sum_probs=103.3
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
+..++..--+..+-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|.|||.-.+...+++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 333444433444779999999999999832 12235556666666665 59999999988877655443
Q ss_pred ccc-------------------Cc-eEEeecceEEEeC-----------CCceeecccCCCChhHH-HHHHHHH------
Q 002285 669 GEY-------------------NM-WLAAENGMFLRLT-----------TGEWMTTMPENLNMDWV-DSVKHVF------ 710 (942)
Q Consensus 669 ~~~-------------------~l-~liaehG~~ir~~-----------~~~w~~~~~~~~~~~w~-~~v~~il------ 710 (942)
..+ ++ .+-||.-+.++.. .+.|... .-..|. +.+.+++
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 321 11 3445555555532 1245321 112343 2233333
Q ss_pred -HHHHhc--CCCeeeeeecceEEEEEeccchHHhHHHHHH----HHHHHhcC-CCCCCCeEEEEcCc--EEEEEECCCCH
Q 002285 711 -EYFTER--TPRSHFEVRETSLVWNYKYADLEFGRLQARD----ILQHLWSG-PISNASVDVVQGGR--SVEVRAVGVTK 780 (942)
Q Consensus 711 -~~~~~r--~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e----l~~~L~~~-~~~~~~v~v~~G~~--~vEV~p~gvnK 780 (942)
.....+ .| ..|-.|+-++-+--. ....+...|.+| +...|... .....++....|.. +|+| -||
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdK 350 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDK 350 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCc
Confidence 222222 34 455666655543211 110111122222 22333111 11123566666533 3454 489
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
.-+|..+.+.+.-.+ .+.+..++-+||
T Consensus 351 s~GV~~lQ~y~~~~~--~i~~~~tLHVGD 377 (408)
T PF06437_consen 351 SLGVRALQKYFDPEG--GIKPSETLHVGD 377 (408)
T ss_pred HHhHHHHHHHHHhcc--CCCccceeeehh
Confidence 999999998882111 167889999999
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.32 E-value=24 Score=40.61 Aligned_cols=134 Identities=19% Similarity=0.253 Sum_probs=83.8
Q ss_pred CceEEEeeccccc-CCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHH-HhhccccCCcCccc
Q 002285 374 RKVMLGVDRLDMI-KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIV-GRINGRYGTLTTVP 451 (942)
Q Consensus 374 ~~iIl~VgRLd~~-KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv-~~IN~~~~~~~~~p 451 (942)
+.+++..-|-.-. +++...+.|+.++.+++|+.. +++ |.--. +.. ++.+ ..+ +.. ..
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~--viy-----p~H~~-~~v-------~e~~~~~L----~~~--~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI--VIY-----PVHPR-PRV-------RELVLKRL----KNV--ER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce--EEE-----eCCCC-hhh-------hHHHHHHh----CCC--Cc
Confidence 3555666677655 999999999999999998853 222 22111 222 2222 111 111 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCc-e-EEEeCCCCcccccCC-ceEEECCCCHHHH
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKG-V-LILSEFAGAAQSLGA-GAILVNPWNITEV 528 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G-~-lIlSe~~G~~~~lg~-~gllVnP~D~~~l 528 (942)
|+ +..+++..+...|+..|-+.+--| |=.--||-.- | | +++=+.+-=.+.+.. +-++|+ .|.+.+
T Consensus 264 v~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~l-----g~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i 331 (383)
T COG0381 264 VK-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSL-----GKPVLVLRDTTERPEGVEAGTNILVG-TDEENI 331 (383)
T ss_pred EE-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhc-----CCcEEeeccCCCCccceecCceEEeC-ccHHHH
Confidence 43 556788999999999996666544 3345688776 4 3 444455544444522 334555 578999
Q ss_pred HHHHHHHhCCCH
Q 002285 529 ASSIGYALNMPA 540 (942)
Q Consensus 529 A~aI~~aL~m~~ 540 (942)
.+++..+++++.
T Consensus 332 ~~~~~~ll~~~~ 343 (383)
T COG0381 332 LDAATELLEDEE 343 (383)
T ss_pred HHHHHHHhhChH
Confidence 999999998754
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=90.26 E-value=0.18 Score=51.06 Aligned_cols=41 Identities=17% Similarity=0.327 Sum_probs=35.2
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
.+.+.+|+.+++++++..+ ++.+.++++|| +.+|.+|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 4567899999999998876 45788999999 99999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=89.97 E-value=1.2 Score=53.93 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=47.0
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCC-eEEEEcCCChhhHHHhhcccCc
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT-TVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~-~V~IvSGR~~~~L~~~~~~~~l 673 (942)
...+.+++-.||++..... ....+-|++.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 340 ~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred CCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 3446677777888765421 233577899999999987 688 9999999999988888777554
|
. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.52 E-value=0.04 Score=59.16 Aligned_cols=85 Identities=8% Similarity=0.076 Sum_probs=52.3
Q ss_pred cCCEEEEEecCCccCCCCCccCC--C------CCc----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHh
Q 002285 600 SNNRLLILGFNATLTAPVDFLGR--R------GGQ----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDN 667 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~--~------~~~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~ 667 (942)
-++..++||+|+|+++..+.-.. . ... +.......-|.+++.++.+.+ .|..|+++|||+-..-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 45678999999999854221000 0 000 001223455668899999887 6999999999998865544
Q ss_pred hccc-CceEEeecceEEEe
Q 002285 668 FGEY-NMWLAAENGMFLRL 685 (942)
Q Consensus 668 ~~~~-~l~liaehG~~ir~ 685 (942)
...+ ..|+.+-.+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 4444 23443445556653
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.25 E-value=0.23 Score=49.46 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
+|-.|.+.|+++++ +.++.+.|+|| |.+|.++|+.++-.
T Consensus 83 dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGls 121 (170)
T COG1778 83 DKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGLS 121 (170)
T ss_pred hHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCCc
Confidence 89999999999998 66899999999 99999999999863
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.56 Score=47.27 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=39.8
Q ss_pred EEEEecCCccCCCCCccCCCCCcccc-CCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIRE-MEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD 665 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~ 665 (942)
++++|+||||+... ..++-++- ......+.+.++.+++++ .|..++-+|+|+.....
T Consensus 1 VVvsDIDGTiT~SD----~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSD----VLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccc----hhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHH
Confidence 47899999999761 01111110 011577889999999987 69999999999976543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.07 E-value=49 Score=38.12 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=56.9
Q ss_pred HHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc--cc------c--CCceEEECCCC--HHHH
Q 002285 461 FHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEV 528 (942)
Q Consensus 461 ~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~--~~------l--g~~gllVnP~D--~~~l 528 (942)
.+++.++|++||+++.=+= ++++-|..+++ -|.|+=-+...+ ++ + -..|+.+.-.+ .+.+
T Consensus 243 ~~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l 314 (357)
T COG0707 243 IDDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKL 314 (357)
T ss_pred HhhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHH
Confidence 4679999999999986542 58899999992 466665554441 22 2 23566666555 8899
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHHh
Q 002285 529 ASSIGYALNMPADEREKRHLHNFMHVTT 556 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~~v~~ 556 (942)
++.|..+++. ++...++..+++.....
T Consensus 315 ~~~i~~l~~~-~~~l~~m~~~a~~~~~p 341 (357)
T COG0707 315 AELILRLLSN-PEKLKAMAENAKKLGKP 341 (357)
T ss_pred HHHHHHHhcC-HHHHHHHHHHHHhcCCC
Confidence 9999999986 33333443444443333
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.21 E-value=1 Score=49.41 Aligned_cols=17 Identities=6% Similarity=0.110 Sum_probs=14.8
Q ss_pred cCCEEEEEecCCccCCC
Q 002285 600 SNNRLLILGFNATLTAP 616 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~ 616 (942)
-..++|+||+||||++.
T Consensus 22 ~~~k~vIFDlDGTLvDS 38 (260)
T PLN03243 22 CGWLGVVLEWEGVIVED 38 (260)
T ss_pred CCceEEEEeCCCceeCC
Confidence 35689999999999986
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=88.21 E-value=56 Score=40.10 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=32.2
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR 294 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~ 294 (942)
+++|+|..=||-=+ .+.+.+|+.+.+.|+.++. ++.+|.-=++|...++
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYV-----sPqVWAWR~~Rikki~ 359 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYV-----CPSIWAWRPKRKTILE 359 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE-----CccceeeCcchHHHHH
Confidence 47898888776532 4678899987767887775 3456654455544443
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=88.19 E-value=6.9 Score=45.10 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=59.1
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccc----cc--CCceEEECC--CCHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQ----SL--GAGAILVNP--WNIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~----~l--g~~gllVnP--~D~~ 526 (942)
+.+.+++. .++..||++|..+ |.| +.+|++++ +.|+|+.-..+--. .+ ...|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~----G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFN----GVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHh----CCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 34667764 5688999998654 655 67999999 24555544332111 12 124566654 4678
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHH
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATF 566 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~f 566 (942)
+++++|.++|..+ +.+++.++..+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 334444444444433 3445554433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=87.87 E-value=52 Score=37.71 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR 289 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r 289 (942)
+++|++..=||-=+ .+.+.+|+.+|++++.++. ++.+|.-=++|
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi-----~PqvWAWr~~R 120 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYI-----LPQVWAWKKGR 120 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE-----CccceeeCcch
Confidence 67898888777532 4788999999999988775 34566544444
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=87.29 E-value=1 Score=48.08 Aligned_cols=15 Identities=20% Similarity=0.264 Sum_probs=13.3
Q ss_pred CEEEEEecCCccCCC
Q 002285 602 NRLLILGFNATLTAP 616 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~ 616 (942)
.++|+||+||||++.
T Consensus 10 ~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 10 VDTVLLDMDGTLLDL 24 (224)
T ss_pred CCEEEEcCCCCccch
Confidence 578999999999994
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=87.08 E-value=3.5 Score=45.55 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=56.9
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+++++..|-.|+.+....+++|+..+. +++. +.+ |.++.. +.+ +++++++.. +. .|.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~--i~v--v~G~~~---~~~----~~l~~~~~~-~~--------~i~ 227 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INIS--ITL--VTGSSN---PNL----DELKKFAKE-YP--------NII 227 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCce--EEE--EECCCC---cCH----HHHHHHHHh-CC--------CEE
Confidence 568999999999887778888887642 3332 333 333321 222 334444332 11 133
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhh
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~ 493 (942)
. .+ ..+++..+|..||+++.. -|.++.|++++
T Consensus 228 ~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~ 259 (279)
T TIGR03590 228 L-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCL 259 (279)
T ss_pred E-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHc
Confidence 2 22 257899999999999984 45899999999
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.74 E-value=1.4 Score=49.67 Aligned_cols=63 Identities=24% Similarity=0.284 Sum_probs=47.4
Q ss_pred CEEEEEecCCccCCCC--CccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 602 NRLLILGFNATLTAPV--DFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~--~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
.|+|++|+|.||..-+ ++ +..+ + .-..+.+.+.+.|++|.+ .|..++|+|..+...+...|..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~-g~~~--i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGED-GIDN--L--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccC-Cccc--c--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 5899999999999753 11 0000 0 011245889999999987 6999999999999999988877
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.46 E-value=1.3 Score=45.09 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=30.8
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.|..|+..++++++.. ++.++++|| +.+|..|-+.+.-
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d~ 183 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCCc
Confidence 45778998888887642 467899999 9999998877654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=86.37 E-value=1.3 Score=46.87 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 4577888899999886 58999999999888888877654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.27 E-value=0.68 Score=47.77 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=38.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCcccc-CCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIRE-MEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
.++||||-||||.-..++ ++.. ++-...+.++++|.+|.+ .|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 679999999999865321 1111 344678899999999996 79999999863
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=86.13 E-value=26 Score=43.56 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=89.3
Q ss_pred CCceEEEeecccccCCHHHH----HHHHHHhHHhCCCCCC-cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCc
Q 002285 373 GRKVMLGVDRLDMIKGIPQK----ILAFEKFLEENPSWRD-KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTL 447 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~l----L~Af~~ll~~~P~~~~-~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~ 447 (942)
+..+++++-|+..-|-.... +.-+.++++ .|+... -+++|.-|....++... +++-+.|.+++..||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik~-~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIKN-NPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHH-STTSCCS-EEEEEE----TT-HHH-HHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHHh-cccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 45567899999999987773 334555544 554221 25555544444444332 456667777777777643333
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEE
Q 002285 448 TTVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILV 520 (942)
Q Consensus 448 ~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllV 520 (942)
+...|+|+. ..+-.--..++.++||-+.+|++ |.-|..-+=||.- |.+.+|..-|+.-++ | .+.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 334588765 45666777889999999999985 9999999999885 999999999986665 5 466777
Q ss_pred CCCCHHHHHH
Q 002285 521 NPWNITEVAS 530 (942)
Q Consensus 521 nP~D~~~lA~ 530 (942)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 3 34555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.82 E-value=0.72 Score=49.18 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+-|.+.++|..|.+ .+..++++|+.+...++..+..++
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 4567788999999987 478999999999888887776653
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.71 E-value=16 Score=42.33 Aligned_cols=72 Identities=11% Similarity=0.047 Sum_probs=51.1
Q ss_pred HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-------CCceEEE-C-----C-CCHHHH
Q 002285 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-------GAGAILV-N-----P-WNITEV 528 (942)
Q Consensus 463 el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-------g~~gllV-n-----P-~D~~~l 528 (942)
++-.+.+.|.+.|+||.+|.+|.++.|...+ +-|-|.+..+|....+ ...|+.| + | .+++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVM----GiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEe----ccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 4567789999999999999999999998887 2356666666654433 1345543 2 2 356788
Q ss_pred HHHHHHHhCC
Q 002285 529 ASSIGYALNM 538 (942)
Q Consensus 529 A~aI~~aL~m 538 (942)
++-|......
T Consensus 569 ~~~m~~F~~q 578 (692)
T KOG3742|consen 569 ASFMYEFCKQ 578 (692)
T ss_pred HHHHHHHHHH
Confidence 8888777653
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=84.30 E-value=1.6 Score=44.76 Aligned_cols=72 Identities=21% Similarity=0.235 Sum_probs=39.8
Q ss_pred CEEEEEecCCccCCCCCccC-----CC--CC-c---cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC-ChhhHHHhhc
Q 002285 602 NRLLILGFNATLTAPVDFLG-----RR--GG-Q---IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS-DRNVLDDNFG 669 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~-----~~--~~-~---~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR-~~~~L~~~~~ 669 (942)
.+||+||+|+||-+..-+-- .. .. . .......+-|.+.++|+.|.. .|+.++++|=- ..+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 47999999999998632110 00 00 0 112345678899999999998 69999999953 3456666777
Q ss_pred ccCce
Q 002285 670 EYNMW 674 (942)
Q Consensus 670 ~~~l~ 674 (942)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 66554
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=84.25 E-value=1 Score=45.09 Aligned_cols=67 Identities=19% Similarity=0.189 Sum_probs=42.8
Q ss_pred EEEEEecCCccCCCCCccCCCCCc-----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQ-----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~-----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
++++||+||||+.....+....+. .......+-|.+.+.|+.|+. ...|+|.|..+....+..+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999765432100000 001123356889999999875 6999999999998888777665
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=84.10 E-value=1.3 Score=46.58 Aligned_cols=39 Identities=18% Similarity=0.088 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+.|.+.+.|..|.+. ..++|+||-....++.++..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5778888888888863 48888888888888877776554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.83 E-value=1.2 Score=48.85 Aligned_cols=53 Identities=21% Similarity=0.310 Sum_probs=39.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC---ChhhHHHhhcc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS---DRNVLDDNFGE 670 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR---~~~~L~~~~~~ 670 (942)
...++||+||||..- ..+-|...++|++|.+ .|.+++++|-. +...+.+.+..
T Consensus 8 y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 8 YDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 456999999999964 3456889999999998 58999998754 44545444444
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=83.13 E-value=1.8 Score=43.67 Aligned_cols=71 Identities=18% Similarity=0.068 Sum_probs=51.4
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCcc-----c----------------cCCCCCChhHHHHHHHhhhCCCCeEEEEc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQI-----R----------------EMEPKLHPDLKEPLKRLCDDPMTTVVVLS 657 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~-----~----------------~~~~~~~~~~~~aL~~L~~d~g~~V~IvS 657 (942)
+.++..++||+|.||+.....|....... + .....+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 45678899999999998765552111000 0 0123356899999999985 69999999
Q ss_pred CCChhhHHHhhccc
Q 002285 658 GSDRNVLDDNFGEY 671 (942)
Q Consensus 658 GR~~~~L~~~~~~~ 671 (942)
.-+....+..+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999988887776
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=83.08 E-value=2.1 Score=48.45 Aligned_cols=49 Identities=14% Similarity=0.192 Sum_probs=36.1
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCC----CCeEEEEc---CCChhhHHHhh
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDP----MTTVVVLS---GSDRNVLDDNF 668 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~----g~~V~IvS---GR~~~~L~~~~ 668 (942)
.|+||+||||... ..+-+...++|+.|.. . +..++++| |++...+.+.+
T Consensus 2 ~~ifD~DGvL~~g---------------~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG---------------KKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC---------------ccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5889999999975 2347889999999986 4 67777665 66676654443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.59 E-value=24 Score=44.03 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=97.2
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCC-CCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCccc
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENP-SWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVP 451 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P-~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~p 451 (942)
+..+++++-|+..-|-....+.-..++...-. ++..++.++.-|....++... +++-+.|...+..+|.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~a-K~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAA-KEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHH-HHHHHHHHHHHHhhccc------ce
Confidence 35678899999999988877776666655443 565667766555444444432 45667777778888764 24
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECC
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNP 522 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP 522 (942)
|+|+. ..+-.--..++.+|||-..+|++ |.-|..-+=|+.- |.+-+|..-|+-.++ |.+|+++-.
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alN-----GaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALN-----GALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCCCCccccCcCcchHHhc-----CCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 77765 34455556789999999999985 7777777777664 899999999987665 578888854
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=81.80 E-value=2.9 Score=49.92 Aligned_cols=47 Identities=13% Similarity=0.163 Sum_probs=37.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEeecc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAENG 680 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaehG 680 (942)
.+.|++.+.|+++.+ .|.+++|+|+.+...++..+..+++ .++|.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356899999999986 6999999999999999988877653 3445443
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=81.68 E-value=14 Score=47.83 Aligned_cols=68 Identities=13% Similarity=0.222 Sum_probs=48.5
Q ss_pred hhhhcccCCEEEEEecCC-----ccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 594 VDSYLQSNNRLLILGFNA-----TLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DG-----TL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
.+.|.+...|.+++=+++ |++-... ..-.+-+++.++|++|.+ .|.+|+++||-.........
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia 562 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIA 562 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHH
Confidence 344555566778777765 3332211 122467899999999986 69999999999999998887
Q ss_pred cccCc
Q 002285 669 GEYNM 673 (942)
Q Consensus 669 ~~~~l 673 (942)
..+++
T Consensus 563 ~~~Gi 567 (884)
T TIGR01522 563 RRLGM 567 (884)
T ss_pred HHcCC
Confidence 76553
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=81.15 E-value=1.3 Score=45.64 Aligned_cols=39 Identities=18% Similarity=0.377 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-+|+.+++++++.++ .+++.++++|| +.+|.+|++.++.
T Consensus 146 ~~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 146 DNKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred ccHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 479999999999887 56788999999 9999999999976
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=80.02 E-value=3.1 Score=43.57 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=46.0
Q ss_pred cCCEEEEEecCCccCCCC-CccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 600 SNNRLLILGFNATLTAPV-DFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~-~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+++++||+|+||+... ..+ . .....-|.+.+-|+.+.+ ...|+|=|..+...++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~-----~---~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE-----T---GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC-----C---ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 456899999999999752 111 0 122346789999999886 7999999998888887766653
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 942 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 9e-68 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 9e-68 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 4e-66 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 7e-19 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 7e-19 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 4e-18 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 942 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 2e-23 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 2e-09 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 2e-05 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 690 bits (1784), Expect = 0.0
Identities = 158/488 (32%), Positives = 245/488 (50%), Gaps = 23/488 (4%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQK 164
RL+VV+NR+ S GGL +LG + W GW+G ++ K
Sbjct: 3 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLK 54
Query: 165 ALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDA 224
+ K L E+ + +YYN + N +LWP FHY RL + + +D
Sbjct: 55 KVKKG--NITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 105
Query: 225 YKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR 284
Y R N + A + + ++ D++W HDYHL+ L++ N ++G+FLH PFP+ EI
Sbjct: 106 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 165
Query: 285 TLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVED-QGRLTRVAAFP 343
LP+ LL + DL+GF T + F+ + + + G+ R +P
Sbjct: 166 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 225
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
IGI+ + P + + +LK + + V+RLD KG+P++ LA+E LE+
Sbjct: 226 IGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P K+ QIA +R DV YQ + Q+ GRING+YG L P+++L++ D
Sbjct: 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 344
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQ-ASKKGVLILSEFAGAAQSLGAGAILVNP 522
L ++ +DV LVT LRDGMNLV+ E+VA Q + GVL+LS+FAGAA L A++VNP
Sbjct: 345 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 403
Query: 523 WNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE-AQIRT 581
++ EVA+++ AL M ER RH + + W F+S+L + A+ +
Sbjct: 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQ 463
Query: 582 RQVPPSLP 589
R + P
Sbjct: 464 RDKVATFP 471
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 653 bits (1686), Expect = 0.0
Identities = 105/499 (21%), Positives = 185/499 (37%), Gaps = 28/499 (5%)
Query: 104 KQRLLVVANRLPVSAVRRGED-SWQLEISVGGLVSALLGV-REFEARWIGWAGVNV---P 158
+ + + R ++ + ++ GG + + WI A
Sbjct: 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRRA 61
Query: 159 DEIGQKALTKALAEKRCIPVFL---DEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATT 215
+ +T L R I V L D N N++W +Y + + +
Sbjct: 62 SALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYG-WDRWTQPSFG 120
Query: 216 RSFQSQFDAYKRANQMFAKVVNNIYEEG--DVVWCHDYHLMFLPQCLKEYNNNMKVGWFL 273
+ + + R + FA + + V HDY L+ +P L+E + + F+
Sbjct: 121 SDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFV 180
Query: 274 HTPFPSSEIHRTLPS--RTELLRSVLAADLVGFHTYDYARHFVSACTRILG---LEGTPE 328
H P+PS++ R LP RT +L +L A +GF + R+F+ + +L ++
Sbjct: 181 HIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAM 240
Query: 329 GVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKG 388
VE +G TR+ P+G PQ+ + I +E G ++++ R D IK
Sbjct: 241 TVEWRGHRTRLRTMPLGYSPLTLDG--RNPQLPEGI---EEWADGHRLVVHSGRTDPIKN 295
Query: 389 IPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448
+ + AF L +K ++ P R VP +V V N G+
Sbjct: 296 AERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS-- 351
Query: 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG 508
+D D + A + D+ + S DG NL ++E + +ILSE G
Sbjct: 352 --DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVN-ERDADVILSETCG 408
Query: 509 AAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVS 568
AA+ LG VNP+++ E A +I AL +R + T + W +
Sbjct: 409 AAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLD 468
Query: 569 ELNDTIVEAQIRTRQVPPS 587
L + +
Sbjct: 469 GLAADHAARTATAERFDTA 487
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 2e-23
Identities = 19/158 (12%), Positives = 48/158 (30%), Gaps = 9/158 (5%)
Query: 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMT 692
L + L +++G + F ++ + +G ++
Sbjct: 23 YADAGLLSLISDL--KERFDTYIVTGRSPEEIS-RFLPLDINMICYHGACSKINGQIVYN 79
Query: 693 TMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHL 752
+ + D + + P + +++++ + + +
Sbjct: 80 NGSDRF-LGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGAD----MKPKLRSRI 134
Query: 753 WSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGE 790
V+ G +E+R GV KG+AI + GE
Sbjct: 135 -EEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE 171
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 3e-10
Identities = 63/487 (12%), Positives = 129/487 (26%), Gaps = 155/487 (31%)
Query: 8 EDLCVLPNNPPLLQTKRMPGNKYNSSPLTPRTRLERLLRERELRKNRSFL-----QNEGE 62
+ L + ++ K + + L RLL+ + L QN
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSI--QAELRRLLKSKPYE--NCLLVLLNVQNAKA 258
Query: 63 PDFFASES-------------FLNASESWGPIDEEEFAGTRSSTDNGERLEGRCKQRLLV 109
+ F FL+A+ + + + D + L + L
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL--TPDEVKSLLLKY---LDC 313
Query: 110 VANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKA 169
LP + +S +++ + R+ A W W VN LT
Sbjct: 314 RPQDLPREVLTTNP----RRLS---IIAESI--RDGLATWDNWKHVNC------DKLTTI 358
Query: 170 LAEKRCIPVFLDEETVHQYYNG--------------YCNNMLWPLFHYLGLPQEDRLATT 215
+ + + V L+ + ++ ++W + + D +
Sbjct: 359 I--ESSLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLS--LIW-----FDVIKSDVMVVV 408
Query: 216 RSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHT 275
K+ + + +L + EY
Sbjct: 409 NKLHKYSLVEKQPKES-------------TISIPSIYLELKVKLENEY------------ 443
Query: 276 PFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDY-----ARHFVSACTRILGLEGTPEGV 330
+HR++ + ++ + DL+ + Y H +
Sbjct: 444 -----ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI-------------- 484
Query: 331 EDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLD------ 384
+ R+ F + RF+ K R L+
Sbjct: 485 -EHPE--RMTLFRMVFLDFRFLEQ-------------KIRHDSTAWNASGSILNTLQQLK 528
Query: 385 -----MIKGIP---QKILAFEKFL---EENPSWRDKVV-LIQIAVPTRTDVPEYQKLTSQ 432
+ P + + A FL EEN K L++IA+ + E + + +
Sbjct: 529 FYKPYICDNDPKYERLVNAILDFLPKIEEN-LICSKYTDLLRIAL-----MAEDEAIFEE 582
Query: 433 VHEIVGR 439
H+ V R
Sbjct: 583 AHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 6e-09
Identities = 106/696 (15%), Positives = 199/696 (28%), Gaps = 219/696 (31%)
Query: 124 DSWQLEISVGGLVSALLG--VREFEARWIGWAGVNVPDEIGQKALTKA-----LAEK--- 173
++ + + ++S V F+ + +V D + L+K + K
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCK-------DVQDMP-KSILSKEEIDHIIMSKDAV 61
Query: 174 ----RCIPVFLD--EETVHQYYNG-----YCNNMLWPLFHYLGLPQEDRLATTRSFQSQF 222
R L EE V ++ Y L Q TR + Q
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINY--KFLMSPIKT---EQRQPSMMTRMYIEQR 116
Query: 223 DAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEI 282
D NQ+FAK V +L L Q L E V + S
Sbjct: 117 DRLYNDNQVFAK---------YNVSRLQPYLK-LRQALLELRPAKNV--LIDGVLGSG-- 162
Query: 283 HRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI----LGLEGTPEGVEDQGRLTR 338
++ +A D+ + F +I L +PE V L
Sbjct: 163 -----------KTWVALDVCLSYKVQCKMDF-----KIFWLNLKNCNSPETV-----LEM 201
Query: 339 VAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDR------LDMIKGIPQK 392
+ ID + R+ ++ I+ ++ R+++ L ++ +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL--RRLLKSKPYENCLLVLLNVQ-NAKA 258
Query: 393 ILAFE---KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449
AF K L R K V ++ T T + S H + LT
Sbjct: 259 WNAFNLSCKILLTT---RFKQVTDFLSAATTTHI-------SLDHHSMT--------LTP 300
Query: 450 VPIHHLDRSLDFHALCALYAITD------------VALV-TSLRDGMNLVS-YEFVAC-- 493
D D ++++ S+RDG+ ++ V C
Sbjct: 301 ------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 494 --QASKKGVLILS--EFAGAAQSLGAGAIL---VN-P-------WN--ITEVASSI---- 532
+ + +L E+ L ++ + P W I +
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRL---SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411
Query: 533 -GYALNMPADEREKR---HLHN-FMHVTTHTSQEWAATFVSELNDTIVEAQIRTRQVPPS 587
Y+L +++ K + + ++ + E L+ +IV+ +
Sbjct: 412 HKYSL---VEKQPKESTISIPSIYLELKVKLENE------YALHRSIVDHYNIPKTFDSD 462
Query: 588 LPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLG---RRGGQIREME--PKLHPDLKEPL 642
I +D Y ++ +G + M + D +
Sbjct: 463 DLIPPYLDQYF----------YS--------HIGHHLKNIEHPERMTLFRMVFLDFRFLE 504
Query: 643 KRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDW 702
+++ D +T SGS N L Y ++ + + RL
Sbjct: 505 QKIRHD--STAWNASGSILNTLQQ-LKFYKPYICDNDPKYERL----------------- 544
Query: 703 VDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADL 738
V+++ F + E +L+ KY DL
Sbjct: 545 VNAILD----FLPKI--------EENLI-CSKYTDL 567
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 9e-09
Identities = 62/467 (13%), Positives = 125/467 (26%), Gaps = 175/467 (37%)
Query: 536 LNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT----IVEAQIRTRQVPPSLPIK 591
+ L F + + + FV E+ ++ I+T Q PS+ +
Sbjct: 55 IMSKDAVSGTLRL--FWTLLSKQEEM-VQKFVEEVLRINYKFLMSP-IKTEQRQPSMMTR 110
Query: 592 GAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT 651
Y++ +RL +N + R + + L++ L L P
Sbjct: 111 ----MYIEQRDRL----YNDNQVFAKYNVSR---------LQPYLKLRQALLEL--RPAK 151
Query: 652 TVVVLSGSDRNVLDDNFGEYNM------WLAAE------------NGMFLRLTTGEWMT- 692
V++ + W+A + +F W+
Sbjct: 152 NVLI---------------DGVLGSGKTWVALDVCLSYKVQCKMDFKIF-------WLNL 189
Query: 693 ----------TMPENL----------NMDWVDSVKHVFEYFTERTPRSHFEVR--ETSL- 729
M + L D ++K R + + E L
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKSKPYENCLL 248
Query: 730 ----VWNYKYADLEFGRLQARDILQHLWSGPI--SNASV-DVVQGGRSVEVRAVGVTKGA 782
V N K + F L + IL + V D + + + +
Sbjct: 249 VLLNVQNAKAWNA-FN-LSCK-IL-------LTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 783 AIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAG-PRANAADHL 841
D + ++ K L +LP E PR
Sbjct: 299 TPDEVK-SLLL-KYLDCRPQ---------------------DLPREVLTTNPRR------ 329
Query: 842 RRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRM-TLNEGS-SVL 899
+S I ++ + + W+ D++ T+ E S +VL
Sbjct: 330 ----LSIIAESIRDGLATW--------------DN-----WKHVNCDKLTTIIESSLNVL 366
Query: 900 D---LRGENYFSCTVSRKRSN------ARYFLGSSGDVV-TLLNELA 936
+ R + + +V ++ + + V ++N+L
Sbjct: 367 EPAEYR-KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 3e-08
Identities = 101/704 (14%), Positives = 193/704 (27%), Gaps = 228/704 (32%)
Query: 2 NVNSFEEDLCV--LPNNPPLLQTKRMPGNKYNSSPLTPRT-RLERLLRERELRKNRSFLQ 58
++F ++ + + P + +K + S T RL L ++ + F++
Sbjct: 25 FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84
Query: 59 NEGEPDFFASESFLNASESWGPIDEEEFAGTRSSTDNGERLEGRCKQRLLVVANRLPVSA 118
++ FL PI E R + + RL
Sbjct: 85 EVLRINY----KFL-----MSPIKTE----QRQPSMMTRMYI-EQRDRLYNDNQVFAKYN 130
Query: 119 VRRGEDSWQLE-----------ISV---GG-----LVSALL------GVREFEARWIGWA 153
V R + +L + + G + + +F+ W+
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 154 GVNVPDEI--GQKALTKALAEKRC--------IPVFLDEE--------TVHQYYNGY--- 192
N P+ + + L + I + + Y N
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 193 ---CNNMLWPLFHYLGLPQED---R-LATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDV 245
N W F + + L TTR F+ D A + + +
Sbjct: 251 LNVQNAKAWNAF--------NLSCKILLTTR-FKQVTDFLS-----AATTTHISLDHHSM 296
Query: 246 VWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADL-VGF 304
D L + L + + P E+ T P S++A + G
Sbjct: 297 TLTPDEVKSLLLKYL-----DCRPQ-----DLP-REVLTTNP----RRLSIIAESIRDGL 341
Query: 305 HTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHI 364
T+D +H + +LT + I+S + LE P
Sbjct: 342 ATWDNWKHV------------------NCDKLTTI------IES--SLNVLE-P------ 368
Query: 365 NELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVP 424
E ++ F L V IP +L+ + W D +
Sbjct: 369 AEYRKMF----DRLSVFPPS-AH-IPTILLS---LI-----WFDVI----------KSDV 404
Query: 425 EYQKLTSQVHEIVGR--INGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDG 482
V+++ + + +T+ I + L + AL S+ D
Sbjct: 405 M-----VVVNKLHKYSLVE-KQPKESTISIPSIYLELKVKLE------NEYALHRSIVD- 451
Query: 483 MNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADE 542
Y S L+ P+ S IG+ L +
Sbjct: 452 ----HYNIPKTFDSDD--------------------LIPPYLDQYFYSHIGHHL-KNIEH 486
Query: 543 REK----RHLH---NFMHVT-THTSQEWAATFVSELNDTIVEAQIRTRQVPPSLPIKGAV 594
E+ R + F+ H S W A+ + +T+ Q++ +
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNAS--GSILNTL--QQLKFYK----------- 531
Query: 595 DSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDL 638
Y+ N+ + + A +DFL + + + + DL
Sbjct: 532 -PYICDNDPK----YERLVNAILDFLPKIEENLICSK---YTDL 567
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-05
Identities = 68/546 (12%), Positives = 133/546 (24%), Gaps = 173/546 (31%)
Query: 274 HTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTY-DYARHFVSACTRILGLEGTPEGVED 332
H F + E + Y D F
Sbjct: 6 HMDFETGEHQ---------------------YQYKDILSVFE------------------ 26
Query: 333 QGRLTRVAAFPIGIDSDRFVRALELPQVQDHIN------ELKERFAGRKVMLGVDRL-DM 385
D FV + VQD E+ + + G RL
Sbjct: 27 ----------------DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70
Query: 386 IKGIPQKILA--FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 443
+ ++++ E+ L N + ++ I R + Q +
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKF----LMSPIKTEQRQPSMMTRMYIEQR-------DRL 119
Query: 444 YGTLTTVPIHHLDRSLDFHAL-CALYAITDVALVTSLRDGMN------LVSYEFVACQAS 496
Y +++ R + L AL + V DG+ + C +
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI--DGVLGSGKTWVAL---DVCLSY 174
Query: 497 KKGVLILSEFAGAAQ--SLG----AGAILVNPWNITEVASSIGYALNMPADEREKRHLHN 550
K + + +L +L + P H N
Sbjct: 175 K----VQCKMDFKIFWLNLKNCNSPETVLEMLQKL--------LYQIDPNWTSRSDHSSN 222
Query: 551 FMHVTTHTSQEWAATFVSELNDTIVEAQIRTRQVPPSLPI------KGAVDSY-LQSNNR 603
+ L ++++ L + A +++ L +
Sbjct: 223 IKLRI-----HSIQAELRRL--------LKSKPYENCLLVLLNVQNAKAWNAFNLSC--K 267
Query: 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPD---------LKEPLKRL----CD-DP 649
+L+ +T + + L PD L + L +P
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 650 MTTVVVLSGSDRNVLD--DNFGEYNMW-LAAENGMFLR-LTTGEW------MTTMPEN-- 697
+ +++ S R+ L DN+ N L L L E+ ++ P +
Sbjct: 328 R-RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 698 -----LNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV--WN----YKYADLEFGRLQAR 746
L++ W D +K ++ + SLV +
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVN-------KLHKYSLVEKQPKESTISIPSIYLELKVKL 439
Query: 747 DILQHL 752
+ L
Sbjct: 440 ENEYAL 445
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 55/283 (19%), Positives = 87/283 (30%), Gaps = 51/283 (18%)
Query: 216 RSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHT 275
+ + + Y N+ +K ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFID--LSSFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 276 PFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGR 335
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQK 392
+ P ID + Q I + ERF + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452
I + K E+ P + L+ + D PE + +I Y +
Sbjct: 250 IEIYRKVKEKIPGVQ----LL-LVGVMAHDDPEGWIYFEKTLR---KIGEDYD------V 295
Query: 453 HHLDRSLDFHA--LCALYAITDVALVTSLRDGMNLVSYEFVAC 493
L + HA + A +DV L S+R+G L E +
Sbjct: 296 KVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 2e-05
Identities = 27/273 (9%), Positives = 76/273 (27%), Gaps = 52/273 (19%)
Query: 306 TYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHIN 365
TY Y ++ L + T F I++ N
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLK-------------N 232
Query: 366 ELKERFAGRKVMLGVDRLDMI-KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVP 424
+ ++ K++L R + + A + F+++ + ++
Sbjct: 233 YINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIIS----------- 281
Query: 425 EYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMN 484
VG + + ++ L L L + + + + +
Sbjct: 282 ------------VGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 485 LVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPAD- 541
E G+ +++ + + + N +A ++ +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNR 383
Query: 542 EREKRHLHNFMHVTTHTSQEWAATFVSELNDTI 574
+ +K+ N M ++ +F+ E+ + +
Sbjct: 384 DVDKKESSNMMFYINEFNE---FSFIKEIEEKL 413
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 942 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.93 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.93 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.93 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.92 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.92 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.92 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.92 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.91 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.91 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.91 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.9 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.9 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.9 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.86 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.86 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.85 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.85 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.83 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.83 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.83 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.81 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.81 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.8 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.8 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.8 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.79 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.79 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.78 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.78 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.77 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.77 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.77 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.77 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.77 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.77 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.76 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.75 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.75 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.75 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.74 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.73 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.73 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.72 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.72 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.69 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.68 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.63 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.61 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.6 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.58 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.53 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.32 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.24 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 98.97 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.92 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.9 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.89 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.87 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.76 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.72 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 98.64 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.6 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.56 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.56 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.53 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.52 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 98.51 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.5 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 98.48 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.47 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.41 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.39 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.38 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.33 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.31 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.3 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.29 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.29 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 98.27 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.26 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.26 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 98.23 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.17 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.16 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.14 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 98.13 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.12 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.02 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.02 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.01 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 97.98 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.97 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.95 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.95 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.94 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.92 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 97.85 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.82 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.82 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.8 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 97.79 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.79 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.74 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.69 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.58 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 97.57 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.51 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.45 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.41 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.37 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.32 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 97.29 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.11 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 97.03 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 96.97 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 96.92 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.86 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.73 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.62 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 96.59 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 96.57 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 96.41 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 96.37 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.3 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 96.21 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.18 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 96.13 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.04 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 96.02 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 95.94 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 95.91 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 95.63 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.51 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.48 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.34 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.3 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.27 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 95.1 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 94.8 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 94.58 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.57 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 94.48 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.47 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 94.45 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.4 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 94.33 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 94.32 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 94.28 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 94.26 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 94.14 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 94.09 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 93.94 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 93.65 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.52 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 93.36 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 93.25 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 93.18 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 93.02 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 93.01 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 92.68 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 92.55 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 92.51 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 92.45 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 92.31 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 92.2 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 92.0 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 91.79 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 91.12 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 91.11 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 91.11 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 90.81 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 90.62 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 90.46 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 90.42 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 90.24 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 90.02 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 89.71 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 89.65 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 89.62 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 89.15 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 89.12 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 88.84 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 88.66 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 88.55 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 88.37 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 88.14 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 87.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 87.16 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 86.75 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 86.66 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 86.49 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 86.17 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 85.67 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 85.45 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 85.36 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 85.32 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 84.91 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 84.38 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 83.8 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 83.53 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 83.26 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 82.85 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 82.71 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 82.36 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 82.12 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 82.0 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 81.36 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 81.16 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 81.11 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 81.11 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 80.14 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 80.03 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-100 Score=886.25 Aligned_cols=452 Identities=22% Similarity=0.301 Sum_probs=401.1
Q ss_pred CCeEEEEECCCccceeec-CCCcE---EEEecCCchHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH----------h
Q 002285 104 KQRLLVVANRLPVSAVRR-GEDSW---QLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTK----------A 169 (942)
Q Consensus 104 ~~rlivvsnrlP~~~~~~-~~~~~---~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~----------~ 169 (942)
..+|||||||||+.++++ ++|+| .++.++|||++||.++. +|+||||+|... +.....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~----~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSED----DRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHH----HHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCcc----chhhhhcccccccccccc
Confidence 468999999999999987 67887 67778999999999986 799999998532 1111211 2
Q ss_pred hcCccEEEeecChHHHHHHhhhhhhhcccccccCCCCCc-ccccccchhhH-HHHHHHHHHHHHHHHHHHhhc--CCCCE
Q 002285 170 LAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQ-EDRLATTRSFQ-SQFDAYKRANQMFAKVVNNIY--EEGDV 245 (942)
Q Consensus 170 l~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~-~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~--~~~Di 245 (942)
..+++|+||+|+++++++||+||||++|||+|||+...+ .+.+ ..|+ ++|++|++||+.||++|++.+ +++|+
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~---~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~ 152 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF---GSDAREGWADFGRFTRDFADAILKSSAQSADPV 152 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB---CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc---chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCE
Confidence 467999999999999999999999999999999983221 1111 1243 459999999999999999999 58999
Q ss_pred EEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCC--chHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh-c
Q 002285 246 VWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLP--SRTELLRSVLAADLVGFHTYDYARHFVSACTRIL-G 322 (942)
Q Consensus 246 IwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp--~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l-~ 322 (942)
||||||||+++|.+||+++|+++||||||||||++|+|++|| ||++|+++||+||+|||||++|++||+++|++++ |
T Consensus 153 VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g 232 (496)
T 3t5t_A 153 YLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPD 232 (496)
T ss_dssp EEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTT
T ss_pred EEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999 7999999999999999999999999999999999 8
Q ss_pred cccC--CCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 323 LEGT--PEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 323 ~~~~--~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
++.. ..+++++|+.++|.++|+|||++.|.+... ++ .+++|++++++++|++||||++.||+..+|+|| +|+
T Consensus 233 ~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll 306 (496)
T 3t5t_A 233 ARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLA 306 (496)
T ss_dssp CEEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHH
T ss_pred CcccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHH
Confidence 7643 457899999999999999999999987643 11 145777888999999999999999999999999 999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+++|+++ +++|||||.|+++++++|++|++++++++++||++|++. ||+|+ +.++.+++.++|++|||||+||++
T Consensus 307 ~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~Slr 381 (496)
T 3t5t_A 307 ARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTV 381 (496)
T ss_dssp HHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSS
T ss_pred HhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECccc
Confidence 9999999 999999999999999999999999999999999999865 78875 578999999999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHH
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQ 560 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~ 560 (942)
||||||++|||||+ +++|++|+|+++|++++|+.+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.
T Consensus 382 EGfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~ 460 (496)
T 3t5t_A 382 DGQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLE 460 (496)
T ss_dssp BSCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHH
T ss_pred ccCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHH
Confidence 99999999999995 45689999999999999976899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHH
Q 002285 561 EWAATFVSELNDTIVE 576 (942)
Q Consensus 561 ~W~~~fl~~L~~~~~~ 576 (942)
+|+++||.+|..+...
T Consensus 461 ~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 461 AWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccc
Confidence 9999999999887544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-87 Score=788.40 Aligned_cols=448 Identities=35% Similarity=0.641 Sum_probs=404.5
Q ss_pred CeEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHH-hhcCccEEEeecCh
Q 002285 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTK-ALAEKRCIPVFLDE 182 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~l~~ 182 (942)
+||||||||||+.. + ...++|||++||.++ +..+++||||+|.. +++ ++ .+.. ...+++|+||||++
T Consensus 2 ~~livvsnr~p~~~----~----~~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~~-~~-~~~~~~~~~~~~~~v~l~~ 70 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----E----HAASAGGLAVGILGALKAAGGLWFGWSGET-GNE-DQ-PLKKVKKGNITWASFNLSE 70 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SCC-SS-CCEEEEETTEEEEEEEECH
T ss_pred CCEEEEECCCCCCC----C----CCcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Ccc-cc-hhhhhccCCceEEEEECCH
Confidence 58999999999972 1 136899999999998 77899999999965 221 11 1222 23679999999999
Q ss_pred HHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHH
Q 002285 183 ETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLK 261 (942)
Q Consensus 183 ~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr 261 (942)
+++++||+||||++|||+|||..... .|++ .|..|.++|+.||++|.+.++++|+|||||||++++|.++|
T Consensus 71 ~~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr 142 (482)
T 1uqt_A 71 QDLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELR 142 (482)
T ss_dssp HHHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHH
T ss_pred HHHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHH
Confidence 99999999999999999999984221 3554 49999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC-CceecCCeeeEEE
Q 002285 262 EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP-EGVEDQGRLTRVA 340 (942)
Q Consensus 262 ~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~ 340 (942)
++.++++|+||+|+|||++++|+++|++++++++++++|+||||+..|+++|+.+|+++++.+... ..+.+.|+.++|.
T Consensus 143 ~~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~ 222 (482)
T 1uqt_A 143 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTE 222 (482)
T ss_dssp HTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEE
T ss_pred HhCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876543 3467888999999
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||++.|.+....+++.+ ..++|++++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|++
T Consensus 223 vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~ 301 (482)
T 1uqt_A 223 VYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (482)
T ss_dssp ECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS
T ss_pred EEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCc
Confidence 9999999999987644444444 667888898999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhcc-CCCc
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA-SKKG 499 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~-~~~G 499 (942)
+++++|+++++++++++++||++++..+|.||+|+.+.++++++.++|++|||||+||++||||||++|||||+. +++|
T Consensus 302 ~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~g 381 (482)
T 1uqt_A 302 GDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (482)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCC
T ss_pred cchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999973 4557
Q ss_pred eEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 500 VLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 500 ~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
|||+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|+++++++++++.+||++.|+++|+..|.++
T Consensus 382 pvV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CEEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 99999999999999 69999999999999999999999999999999999999999999999999999999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=261.76 Aligned_cols=313 Identities=17% Similarity=0.184 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHHHHHhh---cCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh---hHhh--------cCC
Q 002285 222 FDAYKRANQMFAKVVNNI---YEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS---EIHR--------TLP 287 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~---~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~---e~fr--------~lp 287 (942)
+..+..+.+.+...+... -.++|+||+|+++..+++.++++. .++++++++|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 444444455555555554 348899999999988888888744 5789999999987531 1111 111
Q ss_pred chHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHH
Q 002285 288 SRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINEL 367 (942)
Q Consensus 288 ~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l 367 (942)
........+..+|.|.+.+..+++.... .++ ....++.++|+|||.+.|.+....+........+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~-----------~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFR-----------NFEGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHG-----------GGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhh-----------hcCCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1122334455799999998877665221 111 1245788999999999998764322233445567
Q ss_pred HHHh--cCCceEEEeeccc-ccCCHHHHHHHHHHhHHhC--CCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhcc
Q 002285 368 KERF--AGRKVMLGVDRLD-MIKGIPQKILAFEKFLEEN--PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRING 442 (942)
Q Consensus 368 r~~~--~~~~iIl~VgRLd-~~KGi~~lL~Af~~ll~~~--P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~ 442 (942)
++++ .++++|+++||+. +.||++.+++|++++.+++ |+ +.|+++ |+++. .+.+++++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~-----G~g~~--~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIII-----GKGDP--ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEE-----CCCCH--HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEE-----cCCCh--hHHHHHHHHHhhcC-
Confidence 7666 3448999999999 9999999999999998866 66 445555 34442 24566777766653
Q ss_pred ccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-CCceEEEC
Q 002285 443 RYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-GAGAILVN 521 (942)
Q Consensus 443 ~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-g~~gllVn 521 (942)
.++++.+.++.+++..+|+.||++|+||..||||++++||||| +.|+|+|+.+|..+.+ +.+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~----G~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL----GAIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT----TCEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC----CCCeEEcCCCCcceeEEcCceEEeC
Confidence 2456788899999999999999999999999999999999999 3689999999888888 44999999
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhH
Q 002285 522 PWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTI 574 (942)
Q Consensus 522 P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 574 (942)
|.|++++|++|.++++++++.+.++.+++++++++++++.+++++++.++++.
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 99999999999999996566788888889999999999999999998887654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=258.13 Aligned_cols=296 Identities=18% Similarity=0.181 Sum_probs=204.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhC------CCCeEEEEeccCCCC----hhHhh--cCCc--------------------h
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYN------NNMKVGWFLHTPFPS----SEIHR--TLPS--------------------R 289 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~------p~~~I~~flH~PfP~----~e~fr--~lp~--------------------r 289 (942)
++||||+||||-.++|.+++... .+++++|++|..-.. .+.+. .++. -
T Consensus 153 ~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (536)
T 3vue_A 153 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKI 232 (536)
T ss_dssp SCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEE
T ss_pred CCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccch
Confidence 67899999999999999998764 368999999975211 01110 1111 0
Q ss_pred HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCC--------hhh-
Q 002285 290 TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALEL--------PQV- 360 (942)
Q Consensus 290 ~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~--------~~~- 360 (942)
.-+-.++..||.|..-++.|++..++. .+ ...++....+..+|.+||||||.+.|.+.... ...
T Consensus 233 n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~---~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~ 305 (536)
T 3vue_A 233 NWMKAGILEADRVLTVSPYYAEELISG----IA---RGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAI 305 (536)
T ss_dssp EHHHHHHHHCSEEEESCHHHHHHHHTT----CC---CCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHH
T ss_pred hHHHHHHHhccEEEEcCHHHhhhhhcc----cc---cccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhh
Confidence 134567778999998888888765431 11 01112223356689999999999999864321 000
Q ss_pred ---HHHHHHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHH
Q 002285 361 ---QDHINELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQ 432 (942)
Q Consensus 361 ---~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~ 432 (942)
......+++.+ ++.++|++||||++.||++.+|+|+.++++++++ ++++ +. |+.. ....
T Consensus 306 ~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~----l~l~--G~---G~~~----~~~~ 372 (536)
T 3vue_A 306 EAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQ----IVLL--GT---GKKK----FEKL 372 (536)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCE----EEEE--CC---BCHH----HHHH
T ss_pred hhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCe----EEEE--ec---cCch----HHHH
Confidence 11223344444 3578999999999999999999999999765432 4444 21 2322 2333
Q ss_pred HHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc
Q 002285 433 VHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS 512 (942)
Q Consensus 433 l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~ 512 (942)
+..+...++.+ |.+ .+..+.+++..+|+.||+||+||.+||||++++||||| +.|+|+|+.+|..+.
T Consensus 373 ~~~~~~~~~~~--------v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~----G~PvI~s~~gG~~e~ 439 (536)
T 3vue_A 373 LKSMEEKYPGK--------VRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY----GTPCACASTGGLVDT 439 (536)
T ss_dssp HHHHHHHSTTT--------EEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT----TCCEEECSCTHHHHH
T ss_pred HHHHHhhcCCc--------eEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc----CCCEEEcCCCCchhe
Confidence 44444443322 443 45678899999999999999999999999999999999 368999999999998
Q ss_pred c--CCceE----------EECCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 513 L--GAGAI----------LVNPWNITEVASSIGYALN--MPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 513 l--g~~gl----------lVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
+ |.+|+ +|+|.|+++++++|.++|. ..+ +++++.+++. .+.+++++-++++++-+.+.
T Consensus 440 V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~-~~~~~~~~am--~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 440 VIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTP-AYEEMVRNCM--NQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp CCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSH-HHHHHHHHHH--HSCCSSHHHHHHHHHHHHTT
T ss_pred eeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcH-HHHHHHHHHH--HhcCCHHHHHHHHHHHHHHh
Confidence 8 67787 7888999999999999886 333 3344444332 24688888888887766553
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=235.43 Aligned_cols=223 Identities=13% Similarity=0.202 Sum_probs=165.9
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceE
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMF 682 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ 682 (942)
||||+|+||||++...+| ....++++++++|++|.++ | .|+|+|||++..+.+++..+ +++|++||++
T Consensus 2 kli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~ 69 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD-INMICYHGAC 69 (239)
T ss_dssp CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTE
T ss_pred eEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc-hheEEECCEE
Confidence 789999999999975444 3557899999999999984 7 99999999999999999988 8999999999
Q ss_pred EEeCCCceeecccCCCChhH-HHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCC
Q 002285 683 LRLTTGEWMTTMPENLNMDW-VDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNAS 761 (942)
Q Consensus 683 ir~~~~~w~~~~~~~~~~~w-~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~ 761 (942)
+.. ++.+....+......+ .+.+..+++.. .+.++.+++.++..+.+||+..++ +.....+.+.+.+ ... .+
T Consensus 70 i~~-~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~---~~ 142 (239)
T 1u02_A 70 SKI-NGQIVYNNGSDRFLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEI-ARI---FG 142 (239)
T ss_dssp EEE-TTEEEECTTGGGGHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHH-HHH---HT
T ss_pred Eee-CCeeeecccccccchhhHHHHHHHHHHH-hhCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHH-hcc---CC
Confidence 987 4443210000001112 23344444443 345788888888888899986532 1111122333333 211 13
Q ss_pred eEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccc
Q 002285 762 VDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHL 841 (942)
Q Consensus 762 v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~ 841 (942)
+.+..+..++||.|+++|||.||++|+++++ ++|||| +.||++||+++..
T Consensus 143 ~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-----------via~GD-~~ND~~Ml~~a~~------------------ 192 (239)
T 1u02_A 143 VETYYGKMIIELRVPGVNKGSAIRSVRGERP-----------AIIAGD-DATDEAAFEANDD------------------ 192 (239)
T ss_dssp CEEEECSSEEEEECTTCCHHHHHHHHHTTSC-----------EEEEES-SHHHHHHHHTTTT------------------
T ss_pred cEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-----------eEEEeC-CCccHHHHHHhhC------------------
Confidence 5667789999999999999999999998752 899999 9999999998731
Q ss_pred cccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCcccee
Q 002285 842 RRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYF 921 (942)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~ 921 (942)
+++|+||..++.|+|.
T Consensus 193 ----------------------------------------------------------------g~~vam~Na~~~A~~v 208 (239)
T 1u02_A 193 ----------------------------------------------------------------ALTIKVGEGETHAKFH 208 (239)
T ss_dssp ----------------------------------------------------------------SEEEEESSSCCCCSEE
T ss_pred ----------------------------------------------------------------CcEEEECCCCCcceEE
Confidence 5789999888899999
Q ss_pred cCC---HHHHHHHHHHhhhC
Q 002285 922 LGS---SGDVVTLLNELAEC 938 (942)
Q Consensus 922 l~~---~~~V~~~L~~L~~~ 938 (942)
+.+ .+.|..+|+.+...
T Consensus 209 ~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 209 VADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp ESSHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHh
Confidence 988 88899999987643
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-24 Score=246.71 Aligned_cols=301 Identities=17% Similarity=0.125 Sum_probs=208.7
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh----hHhhc--CC-------------chHHHHHHhhhccE
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS----EIHRT--LP-------------SRTELLRSVLAADL 301 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~----e~fr~--lp-------------~r~~il~~ll~aDl 301 (942)
.++|+||+|+++..+++.+++.+..++++++++|..++.. ..+.. ++ ........+..+|.
T Consensus 128 ~~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 207 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADH 207 (485)
T ss_dssp CCCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCe
Confidence 3789999999988777877764456799999999875421 11110 01 01112233456899
Q ss_pred EeecCHHHHHHHHHHHHHHhccccCCCceecCCee--eEEEEeeCccCccccchhcCC-----------hhhHHHHHHHH
Q 002285 302 VGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRL--TRVAAFPIGIDSDRFVRALEL-----------PQVQDHINELK 368 (942)
Q Consensus 302 IgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~--~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr 368 (942)
|...+....+.+... .++... ..+ ...+. .++.++|+|||.+.|.+.... +........++
T Consensus 208 vi~~S~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 281 (485)
T 2qzs_A 208 ITAVSPTYAREITEP---QFAYGM--EGL-LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQ 281 (485)
T ss_dssp EEESSHHHHHHTTSH---HHHTTC--HHH-HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHH
T ss_pred EEecCHHHHHHHhcc---ccCcch--HHH-HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHH
Confidence 888887665544321 011000 000 00012 578899999999988764211 00111234566
Q ss_pred HHhc-----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccc
Q 002285 369 ERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 443 (942)
Q Consensus 369 ~~~~-----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~ 443 (942)
++++ ++++|+++||+++.||++.+|+|++.+.+ ++ +.|+++| +++. .+++++++++.+.+.
T Consensus 282 ~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG-----~g~~--~~~~~l~~~~~~~~~- 347 (485)
T 2qzs_A 282 IAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLG-----AGDP--VLQEGFLAAAAEYPG- 347 (485)
T ss_dssp HHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEE-----EECH--HHHHHHHHHHHHSTT-
T ss_pred HHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEe-----CCch--HHHHHHHHHHHhCCC-
Confidence 6663 56899999999999999999999999876 34 4456554 3331 245666777666431
Q ss_pred cCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--C-------
Q 002285 444 YGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--G------- 514 (942)
Q Consensus 444 ~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g------- 514 (942)
.|+++.+. +.+++..+|+.||++|+||.+||||++++||||| +.|+|+|+.+|..+.+ |
T Consensus 348 -------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~----G~PvI~s~~gg~~e~v~~~~~~~~~~ 415 (485)
T 2qzs_A 348 -------QVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY----GTLPLVRRTGGLADTVSDCSLENLAD 415 (485)
T ss_dssp -------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH----TCEEEEESSHHHHHHCCBCCHHHHHT
T ss_pred -------cEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC----CCCEEECCCCCccceeccCccccccc
Confidence 36555666 7888899999999999999999999999999999 3589999998888888 4
Q ss_pred --CceEEECCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHH
Q 002285 515 --AGAILVNPWNITEVASSIGYALN--MPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 515 --~~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~ 575 (942)
.+|++|+|.|++++|++|.+++. ..++.+.++.+++++ +.++++..++++++-+.+...
T Consensus 416 ~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 416 GVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp TCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC-
T ss_pred cccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhh
Confidence 68999999999999999999994 245566666666553 789999999999887776543
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-23 Score=234.43 Aligned_cols=281 Identities=18% Similarity=0.204 Sum_probs=207.9
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+||+|+...+.+...+.++....++.+..|.... .+...+....+++ .+..+|.|.+.+....+.+.+.
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 158 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSA---- 158 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHH----
T ss_pred CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHh----
Confidence 6799999987665443333333334468889997432 1222223333333 3346899998887666655431
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc---CCceEEEeecccccCCHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA---GRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
. +...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||++.+++|++
T Consensus 159 ~------------~~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 159 F------------GSHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp H------------CSSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred c------------CCCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHH
Confidence 1 1235789999999999886521 123345666663 4589999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
++.+++|+++ |+++ |+++... ++++++..++. .|+| .+.++.+++..+|+.||++|+|
T Consensus 222 ~l~~~~~~~~----l~i~-----G~g~~~~----~l~~~~~~~~~--------~v~~-~g~~~~~~~~~~~~~ad~~v~p 279 (394)
T 3okp_A 222 QVIAARPDAQ----LLIV-----GSGRYES----TLRRLATDVSQ--------NVKF-LGRLEYQDMINTLAAADIFAMP 279 (394)
T ss_dssp HHHHHSTTCE----EEEE-----CCCTTHH----HHHHHTGGGGG--------GEEE-EESCCHHHHHHHHHHCSEEEEC
T ss_pred HHHhhCCCeE----EEEE-----cCchHHH----HHHHHHhcccC--------eEEE-cCCCCHHHHHHHHHhCCEEEec
Confidence 9999998865 4444 4555433 34444322221 2554 5789999999999999999999
Q ss_pred CCC-------CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHH
Q 002285 478 SLR-------DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHL 548 (942)
Q Consensus 478 Sl~-------EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 548 (942)
|.. ||||++++||||| +.|+|+|+.+|..+.+ + +|++++|.|+++++++|.+++++ ++.++++.+
T Consensus 280 s~~~~~~~~~e~~~~~~~Ea~a~----G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~ 353 (394)
T 3okp_A 280 ARTRGGGLDVEGLGIVYLEAQAC----GVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGA 353 (394)
T ss_dssp CCCBGGGTBCCSSCHHHHHHHHT----TCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHH
T ss_pred CccccccccccccCcHHHHHHHc----CCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 999 9999999999999 3579999998888888 4 89999999999999999999984 567777778
Q ss_pred HHhHHHHh-cCHHHHHHHHHHHHHHhH
Q 002285 549 HNFMHVTT-HTSQEWAATFVSELNDTI 574 (942)
Q Consensus 549 ~~~~~v~~-~~~~~W~~~fl~~L~~~~ 574 (942)
++++++.+ |+++.+++++++.+++..
T Consensus 354 ~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 354 AGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 88888865 899999999999887653
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-24 Score=243.32 Aligned_cols=295 Identities=18% Similarity=0.184 Sum_probs=211.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhH-hhcC----C-chHHHHH-HhhhccEEeecCHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEI-HRTL----P-SRTELLR-SVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~-fr~l----p-~r~~il~-~ll~aDlIgF~t~~~~~~Fl 314 (942)
.+|+||+|++...+++.++.+. .++++++.+|..++.... +... + .+..+.+ .+..+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 4899999987655555555443 368899999987532110 0000 0 0111112 23468999888876666554
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQ 391 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~ 391 (942)
+ .++. ...++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||++.
T Consensus 201 ~----~~g~-----------~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDA-----------DPDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCC-----------CGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCC-----------ChhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 3 1221 2357889999999988865321 1112355555 36789999999999999999
Q ss_pred HHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc
Q 002285 392 KILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT 471 (942)
Q Consensus 392 lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A 471 (942)
+|+|++.+.+++|+.. +.|+++|.+. ++++. .+++++++.+.+.. ..|+| .+.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~~--~~l~i~G~~~-~~g~~----~~~l~~~~~~~~l~------~~v~~-~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDRN--LRVIICGGPS-GPNAT----PDTYRHMAEELGVE------KRIRF-LDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTCS--EEEEEECCBC-----------CHHHHHHHHTTCT------TTEEE-ECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCcc--eEEEEEeCCC-CCCcH----HHHHHHHHHHcCCC------CcEEE-cCCCChHHHHHHHHhC
Confidence 9999999999988432 6677665422 11332 34555565554321 12554 5789999999999999
Q ss_pred cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002285 472 DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH 549 (942)
Q Consensus 472 Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 549 (942)
|++|+||..||||++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~----G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQAS----GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHT----TCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHc----CCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 9999999999999999999999 3579999999888888 5679999999999999999999984 5567777788
Q ss_pred HhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 550 NFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 550 ~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+++++.+|+++.+++++++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 899998899999999999988877654
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=253.36 Aligned_cols=299 Identities=16% Similarity=0.101 Sum_probs=212.9
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcC-------C---------chHHH-HHHhhhccEEe
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTL-------P---------SRTEL-LRSVLAADLVG 303 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~l-------p---------~r~~i-l~~ll~aDlIg 303 (942)
.++|+||+|.++..+++.++++.. ++++++++|..++... ..+ | .+..+ ...+..+|.|.
T Consensus 119 ~~~Divh~~~~~~~~~~~~~~~~~-~~p~v~~~H~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 195 (499)
T 2r60_A 119 KFPQVVTTHYGDGGLAGVLLKNIK-GLPFTFTGHSLGAQKM--EKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKII 195 (499)
T ss_dssp CCCSEEEEEHHHHHHHHHHHHHHH-CCCEEEECSSCHHHHH--HTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEcCCcchHHHHHHHHhc-CCcEEEEccCcccccc--hhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEE
Confidence 368999999987666666565443 6788899998653211 100 0 00011 12234578877
Q ss_pred ecCHHHHHHHHHHHHHHhccccCCCceecCC------eeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc-----
Q 002285 304 FHTYDYARHFVSACTRILGLEGTPEGVEDQG------RLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA----- 372 (942)
Q Consensus 304 F~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~g------r~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~----- 372 (942)
+.+....+.+.+ . .+.| ...++.++|+|||.+.|.+... .+....++++++
T Consensus 196 ~~S~~~~~~~~~----~----------~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~ 257 (499)
T 2r60_A 196 VSTSQERFGQYS----H----------DLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGS 257 (499)
T ss_dssp ESSHHHHHHTTT----S----------GGGTTTCCTTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCG
T ss_pred ECCHHHHHHHHh----h----------hcccccccccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccc
Confidence 777554443221 0 0012 3467899999999998875421 112234555543
Q ss_pred ---CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC----h---hHHHHHHHHHHHHHHhhcc
Q 002285 373 ---GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD----V---PEYQKLTSQVHEIVGRING 442 (942)
Q Consensus 373 ---~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd----~---~~y~~l~~~l~~lv~~IN~ 442 (942)
++++|+++||+.+.||+..+|+|++.+.+++|+. +.|+++|. ..+. + ....++.+++++++.+.+.
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~-~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l 333 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRG-IENPFEDYSRAGQEEKEILGKIIELIDNNDC 333 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESS-CSBTTTBCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECC-CCCcccccccccccchHHHHHHHHHHHhcCC
Confidence 6789999999999999999999999998776652 34554543 1111 0 1123346677777776543
Q ss_pred ccCCcCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCc
Q 002285 443 RYGTLTTVPIHHLDRSLDFHALCALYAIT----DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAG 516 (942)
Q Consensus 443 ~~~~~~~~pV~~l~~~v~~~el~aly~~A----Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~ 516 (942)
. ..|+| .|.++.+++..+|+.| |++|+||.+||||++++||||| +.|+|+|+.+|..+.+ +.+
T Consensus 334 ~------~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~----G~PvI~s~~~g~~e~v~~~~~ 402 (499)
T 2r60_A 334 R------GKVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS----GLPAVVTRNGGPAEILDGGKY 402 (499)
T ss_dssp B------TTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT----TCCEEEESSBHHHHHTGGGTS
T ss_pred C------ceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc----CCCEEEecCCCHHHHhcCCce
Confidence 2 12554 5789999999999999 9999999999999999999999 3589999988888887 457
Q ss_pred eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHHHHHHHhHHH
Q 002285 517 AILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 517 gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~L~~~~~~ 576 (942)
|++|+|.|++++|++|.+++++ ++.+.++.+++++++.+ |+++.+++++++.+.+....
T Consensus 403 g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 403 GVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp SEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999984 56777778888888877 99999999999988877554
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-23 Score=243.24 Aligned_cols=299 Identities=16% Similarity=0.167 Sum_probs=208.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhh-CCCCeEEEEeccCCCCh----hHhhc--CCc-------------hHHHHHHhhhccE
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEY-NNNMKVGWFLHTPFPSS----EIHRT--LPS-------------RTELLRSVLAADL 301 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~-~p~~~I~~flH~PfP~~----e~fr~--lp~-------------r~~il~~ll~aDl 301 (942)
++|+||+|+++..+++.++++. ..++++++++|..++.. ..+.. ++. .......+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 7899999998877778777764 45789999999975421 11111 110 0122233456899
Q ss_pred EeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCC-----------hhhHHHHHHHHHH
Q 002285 302 VGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALEL-----------PQVQDHINELKER 370 (942)
Q Consensus 302 IgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 370 (942)
|...+....+.+.+. .+|... .. .+.....++.++|+|||.+.|.+.... +...+....++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~--~~-~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGL--EG-VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTC--HH-HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcch--HH-HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 888887665554321 011000 00 000123578899999999988764321 0011123446666
Q ss_pred hc----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCC
Q 002285 371 FA----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGT 446 (942)
Q Consensus 371 ~~----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~ 446 (942)
++ ++++|+++||+.+.||++.+|+|++.+.+ ++ +.|+++| +++. .+++++++++.+.+.
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG-----~g~~--~~~~~l~~~~~~~~~---- 346 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLG-----AGDV--ALEGALLAAASRHHG---- 346 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEE-----CBCH--HHHHHHHHHHHHTTT----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEe-----CCch--HHHHHHHHHHHhCCC----
Confidence 53 26799999999999999999999999876 34 4466554 3432 245666777666531
Q ss_pred cCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--C---------C
Q 002285 447 LTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--G---------A 515 (942)
Q Consensus 447 ~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g---------~ 515 (942)
.|+++.+. +.+++..+|+.||++|+||.+||||++++||||| +.|+|+|+.+|..+.+ | .
T Consensus 347 ----~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~----G~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 347 ----RVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY----GCIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ----TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH----TCEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ----cEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC----CCCEEEeCCCChhheecccccccccccCC
Confidence 36655665 7888899999999999999999999999999999 3689999999988888 4 6
Q ss_pred ceEEECCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhH
Q 002285 516 GAILVNPWNITEVASSIGYALN--MPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTI 574 (942)
Q Consensus 516 ~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~ 574 (942)
+|++|+|.|++++|++|.+++. ..++.+.++.+++++ +.++++..++++++...++.
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 8999999999999999999993 245566666666654 78999999999988777653
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=239.02 Aligned_cols=281 Identities=21% Similarity=0.217 Sum_probs=196.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+||+|+++...+..++++ ..++++++|..++..... ....+.+.+..+|.+.+.+.++.+
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~~----~~~~~~~~~~~~~~~i~~~s~~~~---------- 188 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNRE----FWEFLRRFVEKYDRYIFHLPEYVQ---------- 188 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCHH----HHHHHHHHHTTSSEEEESSGGGSC----------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccHH----HHHHHHHHHHhCCEEEEechHHHH----------
Confidence 689999999887666555443 278999999877532100 001111222234444332221111
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFEK 398 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~~ 398 (942)
..+ ...++.++|+|||+..|.+....+ .....+++++ .++++|+++||+.+.||++.+|+|++.
T Consensus 189 ------~~~----~~~~~~vi~ngvd~~~~~~~~~~~---~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 189 ------PEL----DRNKAVIMPPSIDPLSEKNVELKQ---TEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp ------TTS----CTTTEEECCCCBCTTSTTTSCCCH---HHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred ------hhC----CccceEEeCCCCChhhhcccccCh---hhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 111 124678999999987775432222 2344566666 367899999999999999999999999
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeC--CCCCHHHHHHHHHHccEEEE
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLD--RSLDFHALCALYAITDVALV 476 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~--~~v~~~el~aly~~ADv~v~ 476 (942)
+.+++|+++ |+++|.... +.++ ..+.+++++.+.+.. ..|+|++ ..++.+++..+|+.||++|+
T Consensus 256 l~~~~~~~~----l~i~G~g~~-~~~~---~~~~l~~~~~~~~~~------~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ 321 (416)
T 2x6q_A 256 VKEKIPGVQ----LLLVGVMAH-DDPE---GWIYFEKTLRKIGED------YDVKVLTNLIGVHAREVNAFQRASDVILQ 321 (416)
T ss_dssp HHHHCTTCE----EEEEECCCT-TCHH---HHHHHHHHHHHHTTC------TTEEEEEGGGTCCHHHHHHHHHHCSEEEE
T ss_pred HHHhCCCeE----EEEEecCcc-cchh---HHHHHHHHHHHhCCC------CcEEEecccCCCCHHHHHHHHHhCCEEEE
Confidence 999998864 555543211 1132 234455555554431 1366543 24568899999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
||.+||||++++||||| +.|+|+|+.+|..+.+ +.+|++++ |+++++++|.+++++ ++.++++.+++++++
T Consensus 322 ps~~E~~~~~~lEAma~----G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 322 MSIREGFGLTVTEAMWK----GKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKERV 394 (416)
T ss_dssp CCSSCSSCHHHHHHHHT----TCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred CCCcCCCccHHHHHHHc----CCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999999 3689999998888887 67899997 999999999999984 556777778888887
Q ss_pred H-hcCHHHHHHHHHHHHHHh
Q 002285 555 T-THTSQEWAATFVSELNDT 573 (942)
Q Consensus 555 ~-~~~~~~W~~~fl~~L~~~ 573 (942)
. .|+++.+++++++.+++.
T Consensus 395 ~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 395 RKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHTBHHHHHHHHHHHHHTC
T ss_pred HHHcCHHHHHHHHHHHHHHh
Confidence 5 799999999998877653
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-24 Score=259.66 Aligned_cols=312 Identities=11% Similarity=0.108 Sum_probs=210.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHH-------------HHHhhhccEEeecCHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTEL-------------LRSVLAADLVGFHTYD 308 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~i-------------l~~ll~aDlIgF~t~~ 308 (942)
.+|+||.|.+...+++.+++++. ++|++++.|...+.........|. .+ ...+..||.|...+..
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~-~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWK-KLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHH-HHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhh-hHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence 68999999876666666666554 789999999753211111111111 11 1134568888877765
Q ss_pred HHHHHHHHHHHHhcccc---CC------CceecCCeeeEEEEeeCccCccccchhcCChh----hHHHHHHH-------H
Q 002285 309 YARHFVSACTRILGLEG---TP------EGVEDQGRLTRVAAFPIGIDSDRFVRALELPQ----VQDHINEL-------K 368 (942)
Q Consensus 309 ~~~~Fl~~~~r~l~~~~---~~------~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~----~~~~~~~l-------r 368 (942)
.++.....+.. .+... .+ .++... ..++.++|+|||.+.|.+...... .......+ +
T Consensus 485 ~~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~--~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 485 EIAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp HHHCCSSSCCT-TGGGSSEEETTTEEEEESCCTT--CTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred HHHHHHHHHHH-hhhhhccccchhhhcccccccC--CCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 44421110000 00000 00 011111 128999999999999976542211 01111111 0
Q ss_pred HH-----hcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCC--CCChhHHHHHHHHHHHHHHhhc
Q 002285 369 ER-----FAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPT--RTDVPEYQKLTSQVHEIVGRIN 441 (942)
Q Consensus 369 ~~-----~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~ps--rgd~~~y~~l~~~l~~lv~~IN 441 (942)
+. ..++++|+++||+++.||++.+|+|+.++.+.+|++ .|+++|.+. ....++..+..+++.+++.+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg 637 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHHcC
Confidence 11 135789999999999999999999999998877764 466665332 1112334445677777777764
Q ss_pred cccCCcCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CC
Q 002285 442 GRYGTLTTVPIHHLD---RSLDFHALCALYA-ITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GA 515 (942)
Q Consensus 442 ~~~~~~~~~pV~~l~---~~v~~~el~aly~-~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~ 515 (942)
.. ..|.|++ +.++.+++..+|+ +||+||+||.+||||++++||||| +.|+|+|+.+|..+.+ |.
T Consensus 638 L~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~----G~PVIasd~GG~~EiV~dg~ 707 (816)
T 3s28_A 638 LN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC----GLPTFATCKGGPAEIIVHGK 707 (816)
T ss_dssp CB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT----TCCEEEESSBTHHHHCCBTT
T ss_pred CC------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc----CCCEEEeCCCChHHHHccCC
Confidence 32 1366554 2455689999998 689999999999999999999999 3589999999999988 77
Q ss_pred ceEEECCCCHHHHHHHHHHHh----CCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHHh
Q 002285 516 GAILVNPWNITEVASSIGYAL----NMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 516 ~gllVnP~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~ 573 (942)
+|++|+|.|++++|++|.+++ .+ ++.+.++.+++++++ +.|+++.+++++++-.+..
T Consensus 708 ~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 708 SGFHIDPYHGDQAADTLADFFTKCKED-PSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TBEEECTTSHHHHHHHHHHHHHHHHHC-THHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred cEEEeCCCCHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 899999999999999998877 54 457778888899988 8899999999998866653
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-23 Score=232.12 Aligned_cols=280 Identities=18% Similarity=0.210 Sum_probs=200.0
Q ss_pred CCCEEEEcCCchhhHHHHH-HhhC-CCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCL-KEYN-NNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~L-r~~~-p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
++|+||+|......++.++ ++.. +++++++++|...+ ..+..-+....+.+ .+..+|.|...+....+.+.+
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 6799999987654444444 3333 36899999997421 11111122222333 344689998888766555432
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
.. +...++.++|+|||.+.|.+... ..+++++ .++++|+++||+.+.||++.+++|
T Consensus 174 -~~------------~~~~~~~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LV------------KPNKDIQTVYNFIDERVYFKRDM--------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HT------------CCSSCEEECCCCCCTTTCCCCCC--------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hh------------CCcccEEEecCCccHHhcCCcch--------HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 11 12357889999999988865321 1234444 457899999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
++.+.++ +++ .|+++ |+++... ++++++.+.+.. ..|.|+ +. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~~----~l~i~-----G~g~~~~----~l~~~~~~~~l~------~~v~~~-g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VDA----KLLLV-----GDGPEFC----TILQLVKNLHIE------DRVLFL-GK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SCC----EEEEE-----CCCTTHH----HHHHHHHTTTCG------GGBCCC-BS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CCC----EEEEE-----CCchHHH----HHHHHHHHcCCC------CeEEEe-Cc--hhhHHHHHHhCCEEE
Confidence 9999876 444 34444 4555443 444555444321 124443 33 578999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
+||..||||++++||||| +.|+|+|+.+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~----G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMAC----GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHT----TCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhc----CCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 999999999999999999 3689999999988888 6789999999999999999999985 55677777888888
Q ss_pred H-HhcCHHHHHHHHHHHHHHhHH
Q 002285 554 V-TTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 554 v-~~~~~~~W~~~fl~~L~~~~~ 575 (942)
+ +.++++.+++.+++.+++...
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHhCCHHHHHHHHHHHHHHHHh
Confidence 8 899999999999988877643
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=232.23 Aligned_cols=275 Identities=17% Similarity=0.088 Sum_probs=206.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|.+....+..++.+.. +.++.+++|..++....+..+... +...+..+|.|.+.+....+.+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQAA-EGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHHE-ESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHhc-CCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 68999999988777655554443 688999999998875433221111 113445799999888766655543 12
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecc-cccCCHHHHHHHHHHhH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL-DMIKGIPQKILAFEKFL 400 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL-d~~KGi~~lL~Af~~ll 400 (942)
+ ..++ ++|+|||.+.|.+...... + ..++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 1 2367 9999999988765432110 0 1256899999999 99999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL- 479 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl- 479 (942)
+++|+++ |+++ |+++. +.+ ++++.++. ..|+ +.+.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~~----l~i~-----G~~~~-~~l----~~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDVE----ILIV-----GRGDE-DEL----REQAGDLA--------GHLR-FLGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTCE----EEEE-----SCSCH-HHH----HHHTGGGG--------GGEE-ECCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCeE----EEEE-----cCCcH-HHH----HHHHHhcc--------CcEE-EEecCCHHHHHHHHHHCCEEEecCCC
Confidence 8888764 4444 45553 333 33433321 1255 4689999999999999999999997
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
.||||++++|||+| +.|+|+|+.+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~----G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAA----GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHH----TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHc----CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHhC
Confidence 99999999999999 3578888888888777 5789999999999999999999985 556777778888888899
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 002285 558 TSQEWAATFVSELNDTIV 575 (942)
Q Consensus 558 ~~~~W~~~fl~~L~~~~~ 575 (942)
+++.+++.+++.+.+...
T Consensus 368 s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp BHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999888887543
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=231.28 Aligned_cols=283 Identities=14% Similarity=0.092 Sum_probs=200.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhh-CC-CCeEEEEeccCCCChhHhhcCCchHHHHHHhhhcc--EEeecCHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEY-NN-NMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAAD--LVGFHTYDYARHFVSAC 317 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~-~p-~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aD--lIgF~t~~~~~~Fl~~~ 317 (942)
++|+||+|.+...+.+.+.+.. .| ..++...+|...+... ..+...+..+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 6899999954433333222222 22 3456666666543211 11112233467 887777655554432
Q ss_pred HHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---c--CCceEEEeecccccCCHHHH
Q 002285 318 TRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---A--GRKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 318 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~iIl~VgRLd~~KGi~~l 392 (942)
++ ...++.++|+|||.+.|.. .++++ . ++++|+++||+.+.||++.+
T Consensus 151 ---~~------------~~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YG------------CKVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TT------------CCSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cC------------CCCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 21 1357899999999988721 22233 2 67899999999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCc-ccEEEeCCCCCHHHHHHHHHHc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT-VPIHHLDRSLDFHALCALYAIT 471 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~-~pV~~l~~~v~~~el~aly~~A 471 (942)
|+|+.++.+++|+++ |+++|...... ..++++.+++++.+.+..-. ..+ ..|+++.+.++.+++..+|+.|
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~---~~~l~~~~~~~~~~~~l~~~-v~~l~~vv~~~g~~~~~~~~~~~~~a 274 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHES---KFDLHSIALRELVASGVDNV-FTHLNKIMINRTVLTDERVDMMYNAC 274 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTC---SCCHHHHHHHHHHHHTCSCH-HHHHTTEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccc---hhhHHHHHHHHHHHcCcccc-cccccceeeccCcCCHHHHHHHHHhC
Confidence 999999999999975 44445332111 11245566666665543210 000 1256678999999999999999
Q ss_pred cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCc---------------eE--EECCCCHHHHHHHH
Q 002285 472 DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVASSI 532 (942)
Q Consensus 472 Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~---------------gl--lVnP~D~~~lA~aI 532 (942)
|++|+||..||||++++||||| +.|+|+|+.+|..+.+ +.+ |+ +++|.|++++|++|
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~----G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i 350 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVL----GKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTT----TCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH
T ss_pred CEEEeCCCcCCCCcHHHHHHHc----CCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH
Confidence 9999999999999999999999 3589999999888887 344 88 99999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHHhHHH
Q 002285 533 GYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 533 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
++++ .+++++++.+++++++ +.|+++.+++++++.+++....
T Consensus 351 -~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 351 -TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp -HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9998 4567778888889988 5789999999999988876544
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-21 Score=228.52 Aligned_cols=313 Identities=11% Similarity=0.050 Sum_probs=201.5
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCC--------CChhHhhcCC--------------chHHHH-HHhhh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPF--------PSSEIHRTLP--------------SRTELL-RSVLA 298 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~Pf--------P~~e~fr~lp--------------~r~~il-~~ll~ 298 (942)
++||+|+||||..+++.+||+..++++.+|+.|.-- -..+++..+. ....++ .++..
T Consensus 181 ~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~ 260 (725)
T 3nb0_A 181 HAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHS 260 (725)
T ss_dssp EEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHh
Confidence 479999999999999999999999999999999851 1111122111 111222 24456
Q ss_pred ccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhh-HHHHHHH----HHHh--
Q 002285 299 ADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQV-QDHINEL----KERF-- 371 (942)
Q Consensus 299 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~-~~~~~~l----r~~~-- 371 (942)
||.|..-+..|++.-. .+++ -+...+ +|||||++.|.+....... .+.+.++ +..+
T Consensus 261 AD~ITTVS~~yA~Ei~----~Ll~-----------r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~ 323 (725)
T 3nb0_A 261 ADVFTTVSQITAFEAE----HLLK-----------RKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHG 323 (725)
T ss_dssp SSEEEESSHHHHHHHH----HHTS-----------SCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEECCHHHHHHHH----HHhc-----------CCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhccc
Confidence 7888777766665433 2332 112233 9999999999764110000 0111122 2222
Q ss_pred -----cCCceEEE-eeccc-ccCCHHHHHHHHHHhHHhC--CCCCCcEEEEEEEcCCCCChhH-----HHHHHHHHHHH-
Q 002285 372 -----AGRKVMLG-VDRLD-MIKGIPQKILAFEKFLEEN--PSWRDKVVLIQIAVPTRTDVPE-----YQKLTSQVHEI- 436 (942)
Q Consensus 372 -----~~~~iIl~-VgRLd-~~KGi~~lL~Af~~ll~~~--P~~~~~vvLvqi~~psrgd~~~-----y~~l~~~l~~l- 436 (942)
.+++++++ +||++ ..||++.+++|+.++...- .+. ++-++..|..|....+.. .+.+.+++.+-
T Consensus 324 ~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~-~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~ 402 (725)
T 3nb0_A 324 CFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGS-KKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTV 402 (725)
T ss_dssp CCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTC-CCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccC-CCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHH
Confidence 24566666 79999 6799999999999987431 111 123333344565433321 11111111111
Q ss_pred ----------------------------------------------------------------------------HHhh
Q 002285 437 ----------------------------------------------------------------------------VGRI 440 (942)
Q Consensus 437 ----------------------------------------------------------------------------v~~I 440 (942)
+.++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l 482 (725)
T 3nb0_A 403 HEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQV 482 (725)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhc
Confidence 1111
Q ss_pred ccccCCcCcccEEEeCCCCCHH------HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-
Q 002285 441 NGRYGTLTTVPIHHLDRSLDFH------ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL- 513 (942)
Q Consensus 441 N~~~~~~~~~pV~~l~~~v~~~------el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l- 513 (942)
+..-...+-+.|+|+.+.++.. ++..+|+.||+||+||.+||||++++||||| +.|+|+|+.+|+.+.+
T Consensus 483 ~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~----G~PvI~s~~gG~~d~V~ 558 (725)
T 3nb0_A 483 QLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM----GVPSITTNVSGFGSYME 558 (725)
T ss_dssp TCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT----TCCEEEETTBHHHHHHH
T ss_pred CCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc----CCCEEEeCCCChhhhhh
Confidence 1110112345678888888876 5899999999999999999999999999999 4689999999998776
Q ss_pred -C-------CceEEEC---CCCHHHHHHHHHHHh----CCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 514 -G-------AGAILVN---PWNITEVASSIGYAL----NMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 514 -g-------~~gllVn---P~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+ .+|++|. |.|+++++++|.++| .+++.+|+.+.+++++....+++..-++.+++..+.+...
T Consensus 559 dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 2 2588884 556666666665555 5677777777777777778999999999998888776544
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-22 Score=222.38 Aligned_cols=228 Identities=14% Similarity=0.152 Sum_probs=174.2
Q ss_pred hccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCC
Q 002285 298 AADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGR 374 (942)
Q Consensus 298 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 374 (942)
.+|.|.+.+....+.+.+ .++ ....++.++|+|||.+.|.+....+ ....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~-----------~~~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQ-----------TEPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHC-----------CCGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhC-----------CChhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCC
Confidence 478888888766665543 122 1245788999999999887654322 223456666 367
Q ss_pred ceEEEeecccccCCHHHHHHHHHHhHHh-CCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 375 KVMLGVDRLDMIKGIPQKILAFEKFLEE-NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 375 ~iIl~VgRLd~~KGi~~lL~Af~~ll~~-~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
++|+++||+.+.||+..+++|++.+.++ +|+ +.|+++| ++++ + ++++++.+.+.. ..|+
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G-----~g~~-~----~~~~~~~~~~~~------~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVG-----QDKP-R----KFEALAEKLGVR------SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEES-----SSCC-H----HHHHHHHHHTCG------GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEc-----CCCH-H----HHHHHHHHcCCC------CcEE
Confidence 8999999999999999999999998776 455 4466554 3332 2 334444443321 1366
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEEC-CCCHHHHHH
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAS 530 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVn-P~D~~~lA~ 530 (942)
|++ . .+++..+|+.||++|+||.+||||++++||||| +.|+|+|+.+|..+.+ +.+|++++ |.|++++++
T Consensus 257 ~~g-~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 FFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA----GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp EES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH----TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred ECC-C--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC----CCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 654 3 578999999999999999999999999999999 3689999999988887 57899998 999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 531 SIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 531 aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
+|.+++++ ++.++++.+++++++.++++..|++.+.+.++.
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999984 567778888899999999999999988877764
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=193.63 Aligned_cols=190 Identities=18% Similarity=0.195 Sum_probs=148.4
Q ss_pred eeCccCccccc--hhcCChhhHHHHHHHHHHhc--CCceEEEeeccc-ccCCHHHHHHHHHHhH--HhCCCCCCcEEEEE
Q 002285 342 FPIGIDSDRFV--RALELPQVQDHINELKERFA--GRKVMLGVDRLD-MIKGIPQKILAFEKFL--EENPSWRDKVVLIQ 414 (942)
Q Consensus 342 iP~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~iIl~VgRLd-~~KGi~~lL~Af~~ll--~~~P~~~~~vvLvq 414 (942)
+|+|||.+.|. +... ...+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|++ .|++
T Consensus 2 ipngvd~~~f~~~~~~~--~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~----~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTG--SRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSCS--CHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE----EEEE
T ss_pred CCCccChhhcccccccc--chhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCe----EEEE
Confidence 69999999998 5421 11223445666763 677999999999 9999999999999997 777764 4555
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
+| +++. ++.+++++++.+.+ .|+|..+.++.+++..+|+.||++|+||..||||++++|||+|
T Consensus 76 ~G-----~~~~--~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~- 138 (200)
T 2bfw_A 76 IG-----KGDP--ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL- 138 (200)
T ss_dssp EC-----CBCH--HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-
T ss_pred EC-----CCCh--HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC-
Confidence 53 3431 13445556655543 2654378899999999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 495 ASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
+.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++|.+++++++.+++++++.+|
T Consensus 139 ---G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 139 ---GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ---TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ---CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 3689999998888888 78899999999999999999999977778888888888877654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-21 Score=213.56 Aligned_cols=239 Identities=13% Similarity=0.012 Sum_probs=179.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+||+|.++...+. .+..+.+ .+++|..++... .+|.|.+.+....+.+.+
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 6899999998755433 3345678 889999876321 178887777654433211
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLE 401 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~ 401 (942)
..++.++|+|||.+.|.+... ...++++|+++||+.+.||++.+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 235678999999988865421 124567899999999999999999999986
Q ss_pred hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC--
Q 002285 402 ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL-- 479 (942)
Q Consensus 402 ~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl-- 479 (942)
+++ |+++ |+++... ++++++.+++. .|+ +.|.++.+++..+|+.||++|+||.
T Consensus 188 ---~~~----l~i~-----G~g~~~~----~l~~~~~~~~~--------~v~-~~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 ---GRR----LVLA-----GPAWEPE----YFDEITRRYGS--------TVE-PIGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp ---TCC----EEEE-----SCCCCHH----HHHHHHHHHTT--------TEE-ECCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred ---CcE----EEEE-----eCcccHH----HHHHHHHHhCC--------CEE-EeccCCHHHHHHHHHhCCEEEECCccc
Confidence 333 4444 4554333 34444444431 255 4788999999999999999999999
Q ss_pred --------CCCCChhHHHHHhhccCCCceEEEeCCCCccccc----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHH
Q 002285 480 --------RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 480 --------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
.||||++++||||| +.|+|+|+.+|..+.+ |.+|++++| |+++++++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~----G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVS----GTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHT----TCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhc----CCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 89999999999999 3679999998988887 347999999 99999999999987 2
Q ss_pred HHHhHHH-HhcCHHHHHHHHHHHHHHhHH
Q 002285 548 LHNFMHV-TTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 548 ~~~~~~v-~~~~~~~W~~~fl~~L~~~~~ 575 (942)
+++++++ +.++++..++++++.+++...
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3345555 778999999999888877644
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-20 Score=201.22 Aligned_cols=192 Identities=18% Similarity=0.175 Sum_probs=127.5
Q ss_pred hhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc--C
Q 002285 595 DSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--N 672 (942)
Q Consensus 595 ~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~ 672 (942)
..|...+.|+|+||+||||++. ....++++++++|++|.+ .|+.|+|+|||+...+..++..+ .
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~-------------~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKD-------------GSLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp -----CCCCEEEECCBTTTBST-------------TCSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred hhhhccCceEEEEeCcCCCCCC-------------CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4688889999999999999986 122689999999999987 69999999999999999999887 4
Q ss_pred ceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCC----------eeeeee-----------------
Q 002285 673 MWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPR----------SHFEVR----------------- 725 (942)
Q Consensus 673 l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~G----------s~iE~K----------------- 725 (942)
.++|+.||+.+...+..... ...+. +.+.++++.+.+..++ .+++..
T Consensus 80 ~~~I~~NGa~i~~~~~~i~~---~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T 3dao_A 80 LLYITDGGTVVRTPKEILKT---YPMDE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMR 153 (283)
T ss_dssp CEEEETTTTEEECSSCEEEE---CCCCH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEE
T ss_pred cEEEECCCcEEEECCEEEEE---ecCCH---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCce
Confidence 68999999999864332111 12232 3344444444332111 111100
Q ss_pred ------------cceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEECCCCHHHHHHHHHHHhc
Q 002285 726 ------------ETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVD-VVQGGRSVEVRAVGVTKGAAIDRILGEIV 792 (942)
Q Consensus 726 ------------~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~-v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~ 792 (942)
...+.+.. +++......+.+.+.+ . ..+. +..+..++||.|+++|||.||++++++++
T Consensus 154 ~~~~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~-----~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg 224 (283)
T 3dao_A 154 EVDDITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAW-----N-KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFD 224 (283)
T ss_dssp ECSCGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHH-----T-TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTT
T ss_pred EcCCHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHh-----c-CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhC
Confidence 00011100 0110000011222223 1 1344 45678899999999999999999999998
Q ss_pred ccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 793 RHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 793 ~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
++++.+++||| +.||++||++++
T Consensus 225 ------i~~~e~ia~GD-~~NDi~ml~~ag 247 (283)
T 3dao_A 225 ------LLPDEVCCFGD-NLNDIEMLQNAG 247 (283)
T ss_dssp ------CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred ------CCHHHEEEECC-CHHHHHHHHhCC
Confidence 67899999999 999999999984
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-19 Score=195.34 Aligned_cols=195 Identities=19% Similarity=0.245 Sum_probs=126.1
Q ss_pred hhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--
Q 002285 595 DSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN-- 672 (942)
Q Consensus 595 ~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-- 672 (942)
.+|.....|+|+||+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.+++..++
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp -------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred cccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 5788999999999999999986 45789999999999986 699999999999999999888774
Q ss_pred ceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeee--eeecc-----------------------
Q 002285 673 MWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHF--EVRET----------------------- 727 (942)
Q Consensus 673 l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i--E~K~~----------------------- 727 (942)
.++|++||+.+...++..... ...+ .+.+.++++.+.. ..+..+ .....
T Consensus 79 ~~~I~~nGa~i~~~~~~~l~~--~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (285)
T 3pgv_A 79 SYMITSNGARVHDSDGQQIFA--HNLD---RDIAADLFEIVRN-DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKL 152 (285)
T ss_dssp CEEEEGGGTEEECTTSCEEEE--CCCC---HHHHHHHTTTTTT-CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEE
T ss_pred ccEEEcCCeEEECCCCCEEEe--cCCC---HHHHHHHHHHHhh-cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEE
Confidence 578999999998543332211 1122 3444555542211 111111 00000
Q ss_pred ----------eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCC
Q 002285 728 ----------SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKG 796 (942)
Q Consensus 728 ----------sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~ 796 (942)
...+-+...+++. ..++.+.+ ...+. ..+.+ ..+..++||.|++++||.||++++++++
T Consensus 153 ~~~~~~~~~~i~ki~~~~~~~~~----~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg---- 222 (285)
T 3pgv_A 153 YEPGELDPQGISKVFFTCEDHEH----LLPLEQAM-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLG---- 222 (285)
T ss_dssp CCTTCSCCSSEEEEEEECSCHHH----HHHHHHHH-HHHHG-GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTT----
T ss_pred ecHHHcCCCCceEEEEeCCCHHH----HHHHHHHH-HHHhc-CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhC----
Confidence 0000111112221 12222233 11111 12454 4468899999999999999999999998
Q ss_pred CCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 797 LKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 797 ~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++++.+++||| +.||++||+.++.
T Consensus 223 --i~~~~~ia~GD-~~NDi~ml~~ag~ 246 (285)
T 3pgv_A 223 --YTLSDCIAFGD-GMNDAEMLSMAGK 246 (285)
T ss_dssp --CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred --CCHHHEEEECC-cHhhHHHHHhcCC
Confidence 67899999999 9999999999853
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-19 Score=195.08 Aligned_cols=188 Identities=13% Similarity=0.222 Sum_probs=129.9
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChh-HHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEe
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPD-LKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAA 677 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~-~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~lia 677 (942)
..|+|+||+||||++. ...+++. +.++|++|.+ .|+.|+|+|||+...+.+++..++ .++|+
T Consensus 36 ~iKli~fDlDGTLld~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~ 100 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNS--------------KGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFVG 100 (304)
T ss_dssp CCSEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEEE
T ss_pred eeEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEEe
Confidence 4689999999999986 4467888 8999999997 599999999999999999988874 68999
Q ss_pred ecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCee--eeeecc----------------------------
Q 002285 678 ENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSH--FEVRET---------------------------- 727 (942)
Q Consensus 678 ehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~--iE~K~~---------------------------- 727 (942)
.||+.+...+..... ...+ .+.+.++++.+.+..++.. +.....
T Consensus 101 ~nGa~i~~~~~~i~~---~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (304)
T 3l7y_A 101 ENGANIISKNQSLIE---VFQQ---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSF 174 (304)
T ss_dssp GGGTEEEETTEEEEE---CCCC---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCC
T ss_pred CCCcEEEECCEEEEE---ecCC---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCH
Confidence 999999754332211 1123 2345555555544222211 110000
Q ss_pred -------eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCC
Q 002285 728 -------SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKT 799 (942)
Q Consensus 728 -------sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~ 799 (942)
...+-... +++ ...++.+.+ ...+....+.++ .+..++||.|++++||.|+++++++++ +
T Consensus 175 ~~~~~~~~~ki~~~~-~~~----~~~~~~~~l-~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg------i 242 (304)
T 3l7y_A 175 SPLPDERFFKLTLQV-KEE----ESAQIMKAI-ADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWN------F 242 (304)
T ss_dssp SSCC-CCEEEEEEEC-CGG----GHHHHHHHH-HTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTT------C
T ss_pred HHcCcCCeEEEEEEc-CHH----HHHHHHHHH-HHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhC------c
Confidence 00000110 111 224455555 433332135554 467899999999999999999999998 6
Q ss_pred CCceEEEEeCCCCCCHHHHHhcC
Q 002285 800 PIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 800 ~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+++.+++||| +.||++||+.++
T Consensus 243 ~~~e~i~~GD-s~NDi~m~~~ag 264 (304)
T 3l7y_A 243 TSDHLMAFGD-GGNDIEMLKLAK 264 (304)
T ss_dssp CGGGEEEEEC-SGGGHHHHHHCT
T ss_pred CHHHEEEECC-CHHHHHHHHhcC
Confidence 7899999999 999999999984
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.7e-20 Score=195.34 Aligned_cols=195 Identities=18% Similarity=0.191 Sum_probs=130.3
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc----CceEE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY----NMWLA 676 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~li 676 (942)
..|||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+.+.++.- ..++|
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i 67 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPP--------------RLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVF 67 (246)
T ss_dssp CSEEEEECSBTTTBST--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CceEEEEeCcCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEE
Confidence 4689999999999986 45689999999999998 69999999999999998888741 25799
Q ss_pred eecceEEEeCCCc-eeecccCCCChhHHHHHHHHHHHHHh-----cCCCeeeeeecceEEEE--Eeccch----HHhHH-
Q 002285 677 AENGMFLRLTTGE-WMTTMPENLNMDWVDSVKHVFEYFTE-----RTPRSHFEVRETSLVWN--YKYADL----EFGRL- 743 (942)
Q Consensus 677 aehG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~-----r~~Gs~iE~K~~sl~~h--yr~ad~----e~~~~- 743 (942)
++||+.+...++. |...++...+.++...+.+.++.+.. ...+.+++.+...+.+. .+.... .+...
T Consensus 68 ~~NGa~i~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (246)
T 3f9r_A 68 AENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYD 147 (246)
T ss_dssp EGGGTEEEETTEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHH
T ss_pred ECCCcEEEECCEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEec
Confidence 9999999865332 22221000223334444444433321 13456777665544431 111111 11100
Q ss_pred ----HHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC----CCC
Q 002285 744 ----QARDILQHLWSGPISNASVD-VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL----QKD 814 (942)
Q Consensus 744 ----qa~el~~~L~~~~~~~~~v~-v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d----~nD 814 (942)
...++.+.+ ...+.+..+. +.+|..++||.|+|+|||.||++|++ . .++++|||| + .||
T Consensus 148 ~~~~~~~~~~~~l-~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~--~--------~~ev~afGD-~~~~g~ND 215 (246)
T 3f9r_A 148 NEHRVRASLIAEL-ENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED--D--------FEEIHFFGD-KTQEGGND 215 (246)
T ss_dssp HHHCHHHHHHHHH-HHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT--T--------CSEEEEEES-CCSTTSTT
T ss_pred ccchHHHHHHHHH-HhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc--C--------cccEEEEeC-CCCCCCCC
Confidence 012333444 2222222355 46688999999999999999999987 2 689999999 8 999
Q ss_pred HHHHHhcC
Q 002285 815 EDIYTFFE 822 (942)
Q Consensus 815 EdMF~~~~ 822 (942)
++||++++
T Consensus 216 i~Ml~~a~ 223 (246)
T 3f9r_A 216 YEIYTDKR 223 (246)
T ss_dssp HHHHTCTT
T ss_pred HHHHhCCC
Confidence 99999763
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=189.51 Aligned_cols=188 Identities=15% Similarity=0.213 Sum_probs=128.4
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEee
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAE 678 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 678 (942)
+.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++
T Consensus 5 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~ 69 (290)
T 3dnp_A 5 SKQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITH 69 (290)
T ss_dssp -CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEG
T ss_pred cceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEc
Confidence 3689999999999986 45689999999999987 599999999999999998888774 389999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEE-------------------------EEE
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV-------------------------WNY 733 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~-------------------------~hy 733 (942)
||+.+....+.+... ...+ .+.+.++++.+.+..-...+........ ..+
T Consensus 70 nGa~i~~~~~~~~~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (290)
T 3dnp_A 70 SGAYIAEKIDAPFFE--KRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFV 144 (290)
T ss_dssp GGTEEESSTTSCSEE--CCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEEC
T ss_pred CCeEEEcCCCCEEEe--cCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhcccccccccccccc
Confidence 999998533332211 1122 4566677776654321111111110000 000
Q ss_pred e------------------ccchHHhHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhccc
Q 002285 734 K------------------YADLEFGRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRH 794 (942)
Q Consensus 734 r------------------~ad~e~~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~ 794 (942)
. ..+++ ...++.+.+ .... ..+.+ ..+..++||.|++++||.|++.++++++
T Consensus 145 ~~~~~~~~~~~~~~~ki~~~~~~~----~~~~~~~~l-~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg-- 215 (290)
T 3dnp_A 145 ESLSDLLMDEPVSAPVIEVYTEHD----IQHDITETI-TKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELG-- 215 (290)
T ss_dssp SCHHHHHHHSCCCCSEEEEECCGG----GHHHHHHHH-HHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT--
T ss_pred CCHHHHHhcCCCCceEEEEeCCHH----HHHHHHHHH-HhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC--
Confidence 0 00111 112233332 1111 23554 4578999999999999999999999998
Q ss_pred CCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 795 KGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 795 ~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
++++.+++||| +.||.+||++++
T Consensus 216 ----i~~~~~i~~GD-~~NDi~m~~~ag 238 (290)
T 3dnp_A 216 ----LSMDDVVAIGH-QYDDLPMIELAG 238 (290)
T ss_dssp ----CCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred ----CCHHHEEEECC-chhhHHHHHhcC
Confidence 67899999999 999999999984
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=188.97 Aligned_cols=192 Identities=17% Similarity=0.167 Sum_probs=126.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC-----ceE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN-----MWL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-----l~l 675 (942)
+.|+|+||+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++
T Consensus 4 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGFI 68 (279)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCEE
T ss_pred cceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCEE
Confidence 4689999999999986 45789999999999997 599999999999999999888775 578
Q ss_pred EeecceEEEeC-CCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEE----------------EEEeccch
Q 002285 676 AAENGMFLRLT-TGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV----------------WNYKYADL 738 (942)
Q Consensus 676 iaehG~~ir~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~----------------~hyr~ad~ 738 (942)
|++||+.+... ++..... ...+.+. +.++++.+.+..-...+........ +.+...+
T Consensus 69 i~~nGa~i~~~~~~~~~~~--~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (279)
T 4dw8_A 69 LSYNGGEIINWESKEMMYE--NVLPNEV---VPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETN- 142 (279)
T ss_dssp EEGGGTEEEETTTCCEEEE--CCCCGGG---HHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECS-
T ss_pred EEeCCeEEEECCCCeEEEE--ecCCHHH---HHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHH-
Confidence 99999999842 3332111 1123333 3344443332211111111110000 0010000
Q ss_pred HH---------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCc
Q 002285 739 EF---------------GRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPID 802 (942)
Q Consensus 739 e~---------------~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d 802 (942)
++ ......++.+.+ ...+. ..+.+ ..+..++|+.|++++||.|+++++++++ ++++
T Consensus 143 ~~~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~ 214 (279)
T 4dw8_A 143 DFLTDITLPVAKCLIVGDAGKLIPVESEL-CIRLQ-GKINVFRSEPYFLELVPQGIDKALSLSVLLENIG------MTRE 214 (279)
T ss_dssp CHHHHSCSCCSCEEEESCHHHHHHHHHHH-HHHTT-TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGG
T ss_pred HHHHhhcCCceEEEEeCCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcC------CCHH
Confidence 00 001122333333 21121 13444 4578999999999999999999999998 6789
Q ss_pred eEEEEeCCCCCCHHHHHhcC
Q 002285 803 YVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 803 ~vl~iGD~d~nDEdMF~~~~ 822 (942)
.+++||| +.||++||+.++
T Consensus 215 ~~i~~GD-~~NDi~m~~~ag 233 (279)
T 4dw8_A 215 EVIAIGD-GYNDLSMIKFAG 233 (279)
T ss_dssp GEEEEEC-SGGGHHHHHHSS
T ss_pred HEEEECC-ChhhHHHHHHcC
Confidence 9999999 999999999984
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.8e-19 Score=191.21 Aligned_cols=184 Identities=16% Similarity=0.144 Sum_probs=124.1
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc---eEEe
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM---WLAA 677 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~lia 677 (942)
+.++|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|+
T Consensus 8 ~~~li~~DlDGTLl~~--------------~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~ 72 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIA 72 (275)
T ss_dssp CCEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEE
T ss_pred CceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEE
Confidence 4689999999999985 23456778999999987 6999999999999999999987743 6999
Q ss_pred ecceEEE-eCCCc-------eeecccCCCChhHHHHHHHHHHHHHhcCCCeeeee------------------------e
Q 002285 678 ENGMFLR-LTTGE-------WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEV------------------------R 725 (942)
Q Consensus 678 ehG~~ir-~~~~~-------w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~------------------------K 725 (942)
+||+++. ..++. +... .+ .+.+.++++.+....+..+... +
T Consensus 73 ~NGa~i~~~~~~~~~~~~~~~~~~----l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (275)
T 1xvi_A 73 ENGAVIQLAEQWQEIDGFPRIISG----IS---HGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLH 145 (275)
T ss_dssp GGGTEEECCTTCTTSTTTTEEECS----SC---HHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCC
T ss_pred eCCCeEEecCcccccCceEEEecC----CC---HHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhh
Confidence 9999997 33221 2221 22 2344444443322111111000 1
Q ss_pred cceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhc-ccCCCCCCCce-
Q 002285 726 ETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIV-RHKGLKTPIDY- 803 (942)
Q Consensus 726 ~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~-~~~~~~~~~d~- 803 (942)
.....+++. .+++. ..++.+.+ .. ..+.++.+..++||.|++++||.|++++++.++ ++ .+.
T Consensus 146 ~~~~~~~~~-~~~~~----~~~~~~~l-~~----~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~------~~~~ 209 (275)
T 1xvi_A 146 EASVTLIWR-DSDER----MAQFTARL-NE----LGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS------GKRP 209 (275)
T ss_dssp SSCEEEEEC-SCHHH----HHHHHHHH-HH----TTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH------SSCC
T ss_pred ccCceeEec-CCHHH----HHHHHHHH-Hh----hCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcc------cccC
Confidence 111122332 12211 22333334 21 246777777889999999999999999999987 63 466
Q ss_pred -EEEEeCCCCCCHHHHHhcCc
Q 002285 804 -VLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 804 -vl~iGD~d~nDEdMF~~~~~ 823 (942)
+++||| +.||++||+.++.
T Consensus 210 ~~~~~GD-~~nD~~m~~~ag~ 229 (275)
T 1xvi_A 210 TTLGLGD-GPNDAPLLEVMDY 229 (275)
T ss_dssp EEEEEES-SGGGHHHHHTSSE
T ss_pred cEEEECC-ChhhHHHHHhCCc
Confidence 999999 9999999998853
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.3e-19 Score=175.13 Aligned_cols=162 Identities=14% Similarity=0.092 Sum_probs=121.4
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+++|+++||+.+.||++.+++|+..+ +++|+ +.|+++ |+++.... +++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~-----G~g~~~~~----~~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLK-----GKGPDEKK----IKLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEE-----CCSTTHHH----HHHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEE-----eCCccHHH----HHHHHHHcCC--------eEE
Confidence 46899999999999999999999987 44455 456555 45554433 4444444332 243
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCc-eEEEeC-CCCcccccCCceEEECCCCHHHHHHH
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKG-VLILSE-FAGAAQSLGAGAILVNPWNITEVASS 531 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G-~lIlSe-~~G~~~~lg~~gllVnP~D~~~lA~a 531 (942)
+ +.++.+++..+|+.||++|+||..||||++++||||| +. |+|++. .+|..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~----G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV----GIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT----TCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc----CCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 8899999999999999999999999999999999999 24 555535 44555555556679999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHH
Q 002285 532 IGYALNMPADEREKRHLHNFMHVTTHTSQEWAA 564 (942)
Q Consensus 532 I~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 564 (942)
|.++++ .++.++++.++++++++.|+++.+++
T Consensus 134 i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLE-NKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHh-CHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 999998 45677777788888888888887765
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=188.07 Aligned_cols=194 Identities=13% Similarity=0.207 Sum_probs=124.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc-----eEE
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM-----WLA 676 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~li 676 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I 69 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 69 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEE
Confidence 479999999999986 45689999999999987 5999999999999999988887743 689
Q ss_pred eecceEEEeC-CCceeecccCCCChhHHHHHHHHHHHHHh----cC-CCeeeeeec---c--------eEEEEEeccchH
Q 002285 677 AENGMFLRLT-TGEWMTTMPENLNMDWVDSVKHVFEYFTE----RT-PRSHFEVRE---T--------SLVWNYKYADLE 739 (942)
Q Consensus 677 aehG~~ir~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~----r~-~Gs~iE~K~---~--------sl~~hyr~ad~e 739 (942)
++||+.+... +++.... ...+.++...+.+.++.+-- .+ .+.+++.+. . .+...+...+ +
T Consensus 70 ~~NGa~i~~~~~~~~i~~--~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 146 (282)
T 1rkq_A 70 TYNGALVQKAADGSTVAQ--TALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAE-K 146 (282)
T ss_dssp EGGGTEEEETTTCCEEEE--CCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGG-G
T ss_pred EeCCeEEEECCCCeEEEE--ecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchh-H
Confidence 9999999852 3332111 12343444444444433200 01 112222110 0 0000000000 0
Q ss_pred H-------------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEE
Q 002285 740 F-------------GRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVL 805 (942)
Q Consensus 740 ~-------------~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 805 (942)
+ ......++.+.+ ...+. ..+.++ .+..++||.|++++||.|++.+++.++ ++++.++
T Consensus 147 ~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~ 218 (282)
T 1rkq_A 147 MDPNTQFLKVMMIDEPAILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKPEEIM 218 (282)
T ss_dssp SCTTCCBCEEEEECCHHHHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred hcccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhC------CCHHHEE
Confidence 0 001122233332 11000 135544 578899999999999999999999998 5678999
Q ss_pred EEeCCCCCCHHHHHhcC
Q 002285 806 CIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 806 ~iGD~d~nDEdMF~~~~ 822 (942)
+||| +.||.+||+.++
T Consensus 219 ~~GD-~~nD~~m~~~ag 234 (282)
T 1rkq_A 219 AIGD-QENDIAMIEYAG 234 (282)
T ss_dssp EEEC-SGGGHHHHHHSS
T ss_pred EECC-cHHHHHHHHHCC
Confidence 9999 999999999884
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-18 Score=182.83 Aligned_cols=186 Identities=15% Similarity=0.171 Sum_probs=126.3
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhH-HHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEee
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDL-KEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAE 678 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~-~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 678 (942)
.|+|++|+||||++. ...+++++ +++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~ 67 (271)
T 1rlm_A 3 VKVIVTDMDGTFLND--------------AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAE 67 (271)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEG
T ss_pred ccEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEEC
Confidence 579999999999986 34688885 999999987 699999999999999999888763 589999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC---------CCeeeeeec-----------------------
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT---------PRSHFEVRE----------------------- 726 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~---------~Gs~iE~K~----------------------- 726 (942)
||+.+...++.... ...+ .+.+.++++.+.+.. .+.++....
T Consensus 68 NGa~i~~~~~~i~~---~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (271)
T 1rlm_A 68 NGALVYEHGKQLFH---GELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQE 141 (271)
T ss_dssp GGTEEEETTEEEEE---CCCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGG
T ss_pred CccEEEECCeEEEE---ecCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhh
Confidence 99999864332111 1122 345566666554321 112221100
Q ss_pred ---ceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCc
Q 002285 727 ---TSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPID 802 (942)
Q Consensus 727 ---~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d 802 (942)
..+.+.+. .++ ....++.+++ ...+. ..+.++ .+..++||.|++++||.++++++++++ ++++
T Consensus 142 ~~~~~~ki~i~-~~~----~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~------i~~~ 208 (271)
T 1rlm_A 142 IDDVLFKFSLN-LPD----EQIPLVIDKL-HVALD-GIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQ 208 (271)
T ss_dssp CCSCEEEEEEE-CCG----GGHHHHHHHH-HHHTT-TSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGG
T ss_pred CCCceEEEEEE-cCH----HHHHHHHHHH-HHHcC-CcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC------CCHH
Confidence 00000000 011 1133344444 21111 134554 467899999999999999999999998 5689
Q ss_pred eEEEEeCCCCCCHHHHHhcC
Q 002285 803 YVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 803 ~vl~iGD~d~nDEdMF~~~~ 822 (942)
.+++||| +.||.+||+.++
T Consensus 209 ~~~~~GD-~~nD~~m~~~ag 227 (271)
T 1rlm_A 209 NVVAIGD-SGNDAEMLKMAR 227 (271)
T ss_dssp GEEEEEC-SGGGHHHHHHCS
T ss_pred HEEEECC-cHHHHHHHHHcC
Confidence 9999999 999999999884
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=190.91 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=125.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh--cccC------
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF--GEYN------ 672 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~--~~~~------ 672 (942)
..|||++|+||||++.. +..++++++++|++|.+ .|+.|+|+|||++..+..++ ..++
T Consensus 26 ~ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~ 91 (301)
T 2b30_A 26 DIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYG 91 (301)
T ss_dssp CCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCS
T ss_pred cccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccCC
Confidence 46899999999999851 34689999999999997 59999999999999999888 6554
Q ss_pred ceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC----------CCeeeeee-cce--------EEEEE
Q 002285 673 MWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT----------PRSHFEVR-ETS--------LVWNY 733 (942)
Q Consensus 673 l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~----------~Gs~iE~K-~~s--------l~~hy 733 (942)
.++|++||+.+...++..... ...+. +.+.++++.+.+.. .+.+++.. ... ..+++
T Consensus 92 ~~~I~~NGa~i~~~~~~~i~~--~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 166 (301)
T 2b30_A 92 MPGVYINGTIVYDQIGYTLLD--ETIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSI 166 (301)
T ss_dssp CSEEEGGGTEEECTTCCEEEE--CCCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCE
T ss_pred CeEEEcCCeEEEeCCCCEEEE--ccCCH---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCce
Confidence 369999999998633332211 11232 34444444433211 11111110 000 00111
Q ss_pred eccchHHh-------------HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCC
Q 002285 734 KYADLEFG-------------RLQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKT 799 (942)
Q Consensus 734 r~ad~e~~-------------~~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~ 799 (942)
+..+.++. .....++.+.+ ...+. ..+.++. +..++||.|++++||.|++.+++.++ +
T Consensus 167 ~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~ 238 (301)
T 2b30_A 167 IIRHNEMLKYRTMNKLMIVLDPSESKTVIGNL-KQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN------I 238 (301)
T ss_dssp EECHHHHTTCCCCSEEEECCCTTTHHHHHHHH-HHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTT------C
T ss_pred eecchhhhccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcC------C
Confidence 11110000 00122333333 21111 2466554 67899999999999999999999998 5
Q ss_pred CCceEEEEeCCCCCCHHHHHhcC
Q 002285 800 PIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 800 ~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+++.+++||| +.||++||+.++
T Consensus 239 ~~~~~~~~GD-~~nD~~m~~~ag 260 (301)
T 2b30_A 239 SNDQVLVVGD-AENDIAMLSNFK 260 (301)
T ss_dssp CGGGEEEEEC-SGGGHHHHHSCS
T ss_pred CHHHEEEECC-CHHHHHHHHHcC
Confidence 6889999999 999999999874
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=186.29 Aligned_cols=189 Identities=12% Similarity=0.171 Sum_probs=115.1
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc-----eE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM-----WL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~l 675 (942)
..|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..+++ ++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYA 68 (279)
T ss_dssp -CCEEEECC-------------------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEE
T ss_pred ceEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEE
Confidence 3689999999999986 45689999999999987 5999999999999999999887753 69
Q ss_pred EeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceE--------------------------
Q 002285 676 AAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSL-------------------------- 729 (942)
Q Consensus 676 iaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl-------------------------- 729 (942)
|++||+.+...++.+.... ... .+.+.++++.+.+..-...+.......
T Consensus 69 i~~nGai~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 3mpo_A 69 ITFNGSVAQTISGKVLTNH--SLT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREV 143 (279)
T ss_dssp EEGGGTEEEETTSCEEEEC--CCC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCG
T ss_pred EEcCcEEEECCCCCEEEec--CCC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCH
Confidence 9999994434444432211 122 344555555544331111111111000
Q ss_pred ----------EEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCC
Q 002285 730 ----------VWNYKYADLEFGRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLK 798 (942)
Q Consensus 730 ----------~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~ 798 (942)
.+-+. .+++ ...++.+.+ ...+. ..+.++ .+..++||.|+++|||.|++.++++++
T Consensus 144 ~~~~~~~~~~ki~~~-~~~~----~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------ 210 (279)
T 3mpo_A 144 SETPRDLTISKAMFV-DYPQ----VIEQVKANM-PQDFK-DRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLG------ 210 (279)
T ss_dssp GGSCTTCCCCEEEEE-CCHH----HHHHHHHHC-CHHHH-HHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTT------
T ss_pred HHhhccCCcEEEEEc-CCHH----HHHHHHHHH-HHHhC-CCEEEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 00000 0111 122233333 11011 124444 468899999999999999999999998
Q ss_pred CCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 799 TPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 799 ~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++++.+++||| +.||++||++++.
T Consensus 211 i~~~~~i~~GD-~~NDi~m~~~ag~ 234 (279)
T 3mpo_A 211 LTADDVMTLGD-QGNDLTMIKYAGL 234 (279)
T ss_dssp CCGGGEEEC---CCTTHHHHHHSTE
T ss_pred CCHHHEEEECC-chhhHHHHHhcCc
Confidence 67899999999 9999999999975
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=200.40 Aligned_cols=161 Identities=9% Similarity=0.011 Sum_probs=121.7
Q ss_pred EEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecc-cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 338 RVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL-DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 338 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL-d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
++.++|+|+|.+.|..... ...+++.|+++||+ .+.||++.+|+||+.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 5788999999886643210 12356789999997 68999999999999999888861 024466555
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
. ++.. .+++. ...|+| .|.++.+++.++|+.||+||+||.+||||++++|||||
T Consensus 284 ~-----~~~~-----------~~l~~------~~~v~f-~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~--- 337 (413)
T 2x0d_A 284 E-----KHKD-----------IALGK------GIHLNS-LGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF--- 337 (413)
T ss_dssp S-----CCCC-----------EEEET------TEEEEE-EESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT---
T ss_pred C-----Cchh-----------hhcCC------cCcEEE-cCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC---
Confidence 2 2211 01111 023554 57899999999999999999999999999999999999
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 497 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
+.|||+ ..+|+.+.+ |.+|++|+|.|++++|++|.++++++.
T Consensus 338 -G~PVV~-~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 338 -GLRVIT-NKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -TCEEEE-ECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred -CCcEEE-eCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 245665 456777666 678999999999999999999998653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=183.76 Aligned_cols=199 Identities=18% Similarity=0.238 Sum_probs=122.8
Q ss_pred hhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc----
Q 002285 595 DSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE---- 670 (942)
Q Consensus 595 ~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~---- 670 (942)
.+|+..+.|||++|+||||++. +..++++++++|++|.+ . +.|+|+|||++..+.+.++.
T Consensus 6 ~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~ 69 (262)
T 2fue_A 6 QAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEV 69 (262)
T ss_dssp -------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTH
T ss_pred ccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcc
Confidence 4566677899999999999986 45689999999999975 5 99999999999999888875
Q ss_pred c--CceEEeecceEEEeCCCceeecccCCCCh-hHHHHHHHHHHHHHhc--------CCCeeeeeecceEEEE-E-eccc
Q 002285 671 Y--NMWLAAENGMFLRLTTGEWMTTMPENLNM-DWVDSVKHVFEYFTER--------TPRSHFEVRETSLVWN-Y-KYAD 737 (942)
Q Consensus 671 ~--~l~liaehG~~ir~~~~~w~~~~~~~~~~-~w~~~v~~il~~~~~r--------~~Gs~iE~K~~sl~~h-y-r~ad 737 (942)
+ ..++|++||+.+... +.. +.....+. -..+.+.++++...+. ..+.+++.+...+.+. + +..+
T Consensus 70 ~~~~~~~I~~NGa~i~~~-~~~--i~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (262)
T 2fue_A 70 IEKFDYVFAENGTVQYKH-GRL--LSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCT 146 (262)
T ss_dssp HHHCSEEEEGGGTEEEET-TEE--CCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCC
T ss_pred cccCCeEEECCCcEEEeC-CeE--EEEeeccccCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCc
Confidence 2 247899999999863 332 11011000 0134444444433221 2334444332222111 1 1111
Q ss_pred hH----HhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEE
Q 002285 738 LE----FGR-----LQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCI 807 (942)
Q Consensus 738 ~e----~~~-----~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 807 (942)
.+ +.. ....++.+.+ ...+....+.+.. +..++||.|+++|||.||++| ++ ++.+.++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~g------i~~~~viaf 216 (262)
T 2fue_A 147 LEERIEFSELDKKEKIREKFVEAL-KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQ------DSFDTIHFF 216 (262)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHH-HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TT------SCCSEEEEE
T ss_pred ccccccEEEEcCCHHHHHHHHHHH-HHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HC------CCHHHEEEE
Confidence 11 000 0112233333 2212222466654 577899999999999999999 55 578999999
Q ss_pred eCC---CCCCHHHHHhcC
Q 002285 808 GHF---LQKDEDIYTFFE 822 (942)
Q Consensus 808 GD~---d~nDEdMF~~~~ 822 (942)
||. +.||++||+.++
T Consensus 217 GDs~~~~~NDi~Ml~~~~ 234 (262)
T 2fue_A 217 GNETSPGGNDFEIFADPR 234 (262)
T ss_dssp ESCCSTTSTTHHHHHSTT
T ss_pred CCCCCCCCCCHHHHhcCc
Confidence 994 599999999875
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-18 Score=182.02 Aligned_cols=190 Identities=15% Similarity=0.126 Sum_probs=123.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc---eEEee
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM---WLAAE 678 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~liae 678 (942)
.|+|++|+||||++. ...++++++++|++ .+ .|+.|+|+|||+...+..++..+++ ++|++
T Consensus 2 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~ 65 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (268)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred ccEEEEeCCCcCCCC--------------CCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEe
Confidence 379999999999986 45689999999999 64 7999999999999999999887754 79999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC--------CCeeeeeec---------ceEEEE-EeccchHH
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT--------PRSHFEVRE---------TSLVWN-YKYADLEF 740 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~--------~Gs~iE~K~---------~sl~~h-yr~ad~e~ 740 (942)
||+.+...++..... ...+. +.+.++++.+.+.. .+.+++.+. ..+... +... .++
T Consensus 66 NGa~i~~~~~~~i~~--~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 139 (268)
T 1nf2_A 66 NGAIVYLPEEGVILN--EKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNL-SEL 139 (268)
T ss_dssp GGTEEEETTTEEEEE--CCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTH-HHH
T ss_pred CCeEEECCCCCEEEe--cCCCH---HHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCH-HHh
Confidence 999998633332111 12332 33444554443221 122222110 000000 0000 000
Q ss_pred h-------------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEE
Q 002285 741 G-------------RLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLC 806 (942)
Q Consensus 741 ~-------------~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~ 806 (942)
. .....++.+.+ ...+. ..+.++ .+..++||.|++++||.+++.++++++ ++++.+++
T Consensus 140 ~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~ 211 (268)
T 1nf2_A 140 VSKMGTTKLLLIDTPERLDELKEIL-SERFK-DVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVV 211 (268)
T ss_dssp HHHHCBSEEEEECCHHHHHHHHHHH-HHHHT-TTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEecCceEEEeCCCCChHHHHHHHHHHcC------CCHHHeEE
Confidence 0 00122233333 11111 235554 567899999999999999999999998 56789999
Q ss_pred EeCCCCCCHHHHHhcC
Q 002285 807 IGHFLQKDEDIYTFFE 822 (942)
Q Consensus 807 iGD~d~nDEdMF~~~~ 822 (942)
||| +.||.+||+.++
T Consensus 212 ~GD-~~nD~~~~~~ag 226 (268)
T 1nf2_A 212 FGD-NENDLFMFEEAG 226 (268)
T ss_dssp EEC-SHHHHHHHTTCS
T ss_pred EcC-chhhHHHHHHcC
Confidence 999 999999998874
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=179.79 Aligned_cols=188 Identities=13% Similarity=0.109 Sum_probs=122.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC-ceEEeecc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN-MWLAAENG 680 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-l~liaehG 680 (942)
.|+|+||+||||++. ....++++++++|++|.+ .|+.|+|+|||+...+ +.+..++ .++|++||
T Consensus 12 iKli~~DlDGTLl~~-------------~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nG 76 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF-------------ETHKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALNG 76 (268)
T ss_dssp CCEEEECSBTTTBCT-------------TTCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGG
T ss_pred eEEEEEeCCCCCcCC-------------CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCC
Confidence 689999999999984 245789999999999997 5999999999999888 4555553 47899999
Q ss_pred eEE-EeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHH----------------
Q 002285 681 MFL-RLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRL---------------- 743 (942)
Q Consensus 681 ~~i-r~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~---------------- 743 (942)
+.+ ...++.... ...+ .+.+.++++.+.+..-...+........ ....+.....
T Consensus 77 a~i~~~~~~~~~~---~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (268)
T 3r4c_A 77 AECVLRDGSVIRK---VAIP---AQDFRKSMELAREFDFAVALELNEGVFV---NRLTPTVEQIAGIVEHPVPPVVDIEE 147 (268)
T ss_dssp TEEEETTSCEEEE---CCCC---HHHHHHHHHHHHHTTCEEEEEETTEEEE---SCCCHHHHHHHHHHTCCCCCBCCHHH
T ss_pred cEEEEcCCeEEEE---ecCC---HHHHHHHHHHHHHcCcEEEEEECCEEEE---eCCcHHHHHHHHHcCCCCCcccchHH
Confidence 999 754422111 1123 3445555555533221122222111110 0001110000
Q ss_pred H-------------HHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 744 Q-------------ARDILQHLWSGPISNASVD-VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 744 q-------------a~el~~~L~~~~~~~~~v~-v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
. ..+....+ ...+ ..+. +..+..++||.|++++||.|+++++++++ ++++.+++|||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~GD 218 (268)
T 3r4c_A 148 MFERKECCQLCFYFDEEAEQKV-MPLL--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYR------VKVSEIMACGD 218 (268)
T ss_dssp HHHHSCCCCEEEECCHHHHHHH-GGGC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT------CCGGGEEEEEC
T ss_pred HhccCceEEEEEecChHHHHHH-HHhC--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcC------CCHHHEEEECC
Confidence 0 00111112 1111 1234 34578899999999999999999999998 67899999999
Q ss_pred CCCCCHHHHHhcCc
Q 002285 810 FLQKDEDIYTFFEP 823 (942)
Q Consensus 810 ~d~nDEdMF~~~~~ 823 (942)
+.||.+||+.++.
T Consensus 219 -~~NDi~m~~~ag~ 231 (268)
T 3r4c_A 219 -GGNDIPMLKAAGI 231 (268)
T ss_dssp -SGGGHHHHHHSSE
T ss_pred -cHHhHHHHHhCCC
Confidence 9999999999853
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=179.62 Aligned_cols=180 Identities=17% Similarity=0.224 Sum_probs=124.0
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC-ceEEeecc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN-MWLAAENG 680 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-l~liaehG 680 (942)
.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||
T Consensus 5 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nG 69 (274)
T 3fzq_A 5 YKLLILDIDGTLRDE--------------VYGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGG 69 (274)
T ss_dssp CCEEEECSBTTTBBT--------------TTBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTT
T ss_pred ceEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCc
Confidence 489999999999986 44689999999999987 699999999999999998888774 35899999
Q ss_pred eEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecc---------------------------------
Q 002285 681 MFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRET--------------------------------- 727 (942)
Q Consensus 681 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~--------------------------------- 727 (942)
+.+...+..... ...+ .+.+.++++.+.+..-...+.....
T Consensus 70 a~i~~~~~~~~~---~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (274)
T 3fzq_A 70 NYIQYHGELLYN---QSFN---QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKI 143 (274)
T ss_dssp TEEEETTEEEEE---CCCC---HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSS
T ss_pred cEEEECCEEEEE---cCCC---HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhc
Confidence 999854332111 1123 2344455554433211111111110
Q ss_pred ---------------eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEE-EEcC--cEEEEEECCCCHHHHHHHHHH
Q 002285 728 ---------------SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDV-VQGG--RSVEVRAVGVTKGAAIDRILG 789 (942)
Q Consensus 728 ---------------sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v-~~G~--~~vEV~p~gvnKG~Av~~Ll~ 789 (942)
.+.+. .+++ ...++.+.+ .. .+.+ ..+. .++||.|++++||.|++++++
T Consensus 144 ~~~~~~~~~~~~~~~ki~~~---~~~~----~~~~~~~~l-~~-----~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~ 210 (274)
T 3fzq_A 144 TYENNIEEYKSQDIHKICLW---SNEK----VFDEVKDIL-QD-----KMELAQRDISSQYYEIIQKDFHKGKAIKRLQE 210 (274)
T ss_dssp CCCCCGGGCSSCCCCEEEEE---CCHH----HHHHHHHHH-GG-----GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHH
T ss_pred ccccchhhhcccCeEEEEEE---cCHH----HHHHHHHHh-hc-----ceEEEeccCCCceEEEeeCCCCHHHHHHHHHH
Confidence 01111 1111 123444444 21 1343 3344 899999999999999999999
Q ss_pred HhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 790 EIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 790 ~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+++ ++++.+++||| +.||++||++++
T Consensus 211 ~lg------i~~~~~i~~GD-~~NDi~m~~~ag 236 (274)
T 3fzq_A 211 RLG------VTQKETICFGD-GQNDIVMFQASD 236 (274)
T ss_dssp HHT------CCSTTEEEECC-SGGGHHHHHTCS
T ss_pred HcC------CCHHHEEEECC-ChhHHHHHHhcC
Confidence 998 67899999999 999999999985
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-18 Score=182.56 Aligned_cols=195 Identities=18% Similarity=0.257 Sum_probs=122.9
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc-c---CceE
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE-Y---NMWL 675 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~-~---~l~l 675 (942)
.+.|||++|+||||++. +..++++++++|++|.+ . +.|+|+|||+...+.+.++. + ..++
T Consensus 4 ~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~ 67 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDYV 67 (246)
T ss_dssp CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSEE
T ss_pred CCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCEE
Confidence 46799999999999986 45689999999999986 5 99999999999988888773 2 2378
Q ss_pred EeecceEEEeCCCc-eeecccCCCChhHHHHHHHHHHHHHh--------cCCCeeeeeecceEEEE-E-eccchH----H
Q 002285 676 AAENGMFLRLTTGE-WMTTMPENLNMDWVDSVKHVFEYFTE--------RTPRSHFEVRETSLVWN-Y-KYADLE----F 740 (942)
Q Consensus 676 iaehG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~--------r~~Gs~iE~K~~sl~~h-y-r~ad~e----~ 740 (942)
|++||+.+...++. |...++...+ .+.+.++++.+.+ ...+.+++.+...+.++ + +....+ +
T Consensus 68 I~~NGa~i~~~~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (246)
T 2amy_A 68 FPENGLVAYKDGKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEF 144 (246)
T ss_dssp ESGGGTEEEETTEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHH
T ss_pred EECCCcEEEeCCcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhh
Confidence 99999999864332 2211000012 2334444433322 12344554433222221 1 111101 1
Q ss_pred hHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC---C
Q 002285 741 GRL-----QARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF---L 811 (942)
Q Consensus 741 ~~~-----qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d 811 (942)
... ...++.+.+ ...+....+.+.. +..++||.|+++|||.||++| ++ ++.+.++||||. +
T Consensus 145 ~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~------i~~~~viafGD~~~~~ 214 (246)
T 2amy_A 145 YELDKKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---EN------DGYKTIYFFGDKTMPG 214 (246)
T ss_dssp HHHHHHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TT------SCCSEEEEEECSCC--
T ss_pred eeecCCHHHHHHHHHHH-HHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hC------CCHHHEEEECCCCCCC
Confidence 000 012233333 2212222466654 678999999999999999999 55 578999999995 6
Q ss_pred CCCHHHHHhcCc
Q 002285 812 QKDEDIYTFFEP 823 (942)
Q Consensus 812 ~nDEdMF~~~~~ 823 (942)
.||++||++++.
T Consensus 215 ~ND~~Ml~~a~~ 226 (246)
T 2amy_A 215 GNDHEIFTDPRT 226 (246)
T ss_dssp -CCCHHHHCTTE
T ss_pred CCcHHHHHhCCc
Confidence 999999997653
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=185.56 Aligned_cols=181 Identities=14% Similarity=0.159 Sum_probs=121.1
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC----ceEEee
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN----MWLAAE 678 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~liae 678 (942)
++|++|+||||++.. ..+ ++++++|+++.+ |+.|+|+|||++..+.+++..++ .++|++
T Consensus 4 ~li~~DlDGTLl~~~--------------~~~-~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~ 66 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ--------------QAL-EHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQVGLMEPDYWLTA 66 (244)
T ss_dssp EEEEECTBTTTBSCH--------------HHH-HHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEET
T ss_pred eEEEEeCCCCCcCCH--------------HHH-HHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEEC
Confidence 599999999999851 122 678899988663 79999999999999999888743 479999
Q ss_pred cceEEEeCC---CceeecccCCCChhH-HHHHHHHHHHHHhcCCCeee----eeecceEEEEEeccchHHhHHHHHHHHH
Q 002285 679 NGMFLRLTT---GEWMTTMPENLNMDW-VDSVKHVFEYFTERTPRSHF----EVRETSLVWNYKYADLEFGRLQARDILQ 750 (942)
Q Consensus 679 hG~~ir~~~---~~w~~~~~~~~~~~w-~~~v~~il~~~~~r~~Gs~i----E~K~~sl~~hyr~ad~e~~~~qa~el~~ 750 (942)
||+.+.... ..|.... ...| .+.+..++ ...++... +.+...+.+++.... ......++.+
T Consensus 67 NGa~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ki~~~~~~~~---~~~~~~~l~~ 135 (244)
T 1s2o_A 67 VGSEIYHPEGLDQHWADYL----SEHWQRDILQAIA----DGFEALKPQSPLEQNPWKISYHLDPQA---CPTVIDQLTE 135 (244)
T ss_dssp TTTEEEETTEECHHHHHHH----HTTCCHHHHHHHH----HTCTTEEECCGGGCBTTBEEEEECTTS---CTHHHHHHHH
T ss_pred CCcEEEeCCCcChHHHHHH----hccccHHHHHHHH----HhccCccccCcccCCCeEEEEEeChhh---HHHHHHHHHH
Confidence 999997531 1121111 0112 12222222 22333222 234455666654221 1111233444
Q ss_pred HHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 751 HLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 751 ~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
.+ ... ...+.++ .+..++||.|++++||.|+++++++++ ++.+.+++||| +.||++||+.+
T Consensus 136 ~~-~~~--~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~~~GD-~~nD~~m~~~~ 197 (244)
T 1s2o_A 136 ML-KET--GIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETS 197 (244)
T ss_dssp HH-HTS--SCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSS
T ss_pred HH-Hhc--CCCeEEEEecCceEEeccCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHhcc
Confidence 44 322 1246654 568899999999999999999999988 56789999999 99999999865
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=173.90 Aligned_cols=182 Identities=16% Similarity=0.221 Sum_probs=127.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (231)
T 1wr8_A 3 IKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAED 67 (231)
T ss_dssp CCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eeEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeC
Confidence 479999999999986 34689999999999987 699999999999999998887664 4689999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeee-ecc---eEEEEEeccchHHhHHHHHHHHHHHhcC
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEV-RET---SLVWNYKYADLEFGRLQARDILQHLWSG 755 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~-K~~---sl~~hyr~ad~e~~~~qa~el~~~L~~~ 755 (942)
|+.+... +... ..... +.+.++++.+.+..||..++. +.. .+.+.....+++ ...++.+.+
T Consensus 68 Ga~i~~~-~~~~--~~~~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--- 132 (231)
T 1wr8_A 68 GGAISYK-KKRI--FLASM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL--- 132 (231)
T ss_dssp GTEEEET-TEEE--ESCCC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT---
T ss_pred CcEEEeC-CEEE--EeccH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHH----HHHHHHHhc---
Confidence 9998753 3321 10111 345556655543455654311 000 112211011222 223343333
Q ss_pred CCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 756 PISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 756 ~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
. ..+.++.+..++|+.|++.+||.++++++++++ ++++.+++||| +.||.+|++.++.
T Consensus 133 --~-~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD-~~nD~~~~~~ag~ 190 (231)
T 1wr8_A 133 --N-LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVGY 190 (231)
T ss_dssp --T-CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred --C-CcEEEEecCcEEEEecCCCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCC
Confidence 1 235666778899999999999999999999998 56789999999 9999999998853
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.9e-18 Score=177.40 Aligned_cols=175 Identities=18% Similarity=0.159 Sum_probs=121.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaeh 679 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..+++ ++|++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~N 69 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 69 (227)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeC
Confidence 479999999999986 34689999999999987 6999999999999999998887743 699999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecc--------eEEEEEeccchHHhHHHHHHHHHH
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRET--------SLVWNYKYADLEFGRLQARDILQH 751 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~--------sl~~hyr~ad~e~~~~qa~el~~~ 751 (942)
|+.+...++.... . . ... +.+.++ +.+.+ .+ ..+.. .+.......++ +..+.
T Consensus 70 Ga~i~~~~~~~i~-~-~-~~l---~~~~~i-~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 129 (227)
T 1l6r_A 70 GGIMFDNDGSIKK-F-F-SNE---GTNKFL-EEMSK----RT-SMRSILTNRWREASTGFDIDPEDV--------DYVRK 129 (227)
T ss_dssp GTEEECTTSCEEE-S-S-CSH---HHHHHH-HHHTT----TS-SCBCCGGGGGCSSSEEEBCCGGGH--------HHHHH
T ss_pred CcEEEeCCCCEEE-E-e-ccH---HHHHHH-HHHHH----Hh-cCCccccccceecccceEEecCCH--------HHHHH
Confidence 9999853333220 1 1 111 444555 43322 11 11000 00000000111 11222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 752 LWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 752 L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+.+. + .+.++.+..++||.|++++||.++++++++++ ++++.+++||| +.||.+||+.++
T Consensus 130 ~~~~-~---~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~------~~~~~~~~iGD-~~nD~~m~~~ag 189 (227)
T 1l6r_A 130 EAES-R---GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPV 189 (227)
T ss_dssp HHHT-T---TEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSS
T ss_pred HHHh-c---CEEEEecCcEEEEecCCCCHHHHHHHHHHHhC------cCHHHEEEECC-cHHhHHHHHHcC
Confidence 2122 2 46666889999999999999999999999987 56789999999 999999998874
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-16 Score=173.57 Aligned_cols=191 Identities=13% Similarity=0.206 Sum_probs=126.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 4 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 68 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 68 (288)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred eEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcC
Confidence 479999999999986 44689999999999987 699999999999999999988774 4699999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC--------CCeeeeeec------c---e--------------
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT--------PRSHFEVRE------T---S-------------- 728 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~--------~Gs~iE~K~------~---s-------------- 728 (942)
|+.+....+.. +...... .+.+.++++...+.. .+.+.+... . .
T Consensus 69 Ga~i~~~~~~~--~~~~~~~---~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (288)
T 1nrw_A 69 GAVIHDPEGRL--YHHETID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQ 143 (288)
T ss_dssp GTEEECTTCCE--EEECCCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred CeEEEcCCCcE--EEEeeCC---HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHh
Confidence 99998532221 1101122 345555555443321 111111000 0 0
Q ss_pred --------EEEEEeccchHH-----------------hHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHH
Q 002285 729 --------LVWNYKYADLEF-----------------GRLQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGA 782 (942)
Q Consensus 729 --------l~~hyr~ad~e~-----------------~~~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~ 782 (942)
..+++...-.+. ......++.+.+ .. . ..+.++. +..++||.|++++||.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l-~~-~--~~~~~~~s~~~~lei~~~~~~K~~ 219 (288)
T 1nrw_A 144 AAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRY-EH-A--EDLTLVSSAEHNFELSSRKASKGQ 219 (288)
T ss_dssp HHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHH-TT-C--TTEEEECSSTTEEEEEETTCSHHH
T ss_pred hhhhhhhcCCceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHH-hh-C--CCEEEEeeCCCcEEEecCCCChHH
Confidence 001110000000 001223344444 33 1 2466554 6789999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 783 AIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 783 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|++.+++.++ ++++.+++||| +.||.+||+.++.
T Consensus 220 ~~~~~~~~~~------~~~~~~~~~GD-~~nD~~m~~~ag~ 253 (288)
T 1nrw_A 220 ALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAGK 253 (288)
T ss_dssp HHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSSE
T ss_pred HHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCc
Confidence 9999999998 56889999999 9999999999853
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=184.59 Aligned_cols=271 Identities=14% Similarity=0.111 Sum_probs=174.5
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+||+|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.+.+
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 167 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK---- 167 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH----
Confidence 67999999753333333332233467777766643 2211121 22233444433 388888777665555432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCc-cCccccchhcCChhhHHHHHHHHHHhc-CCceEEEeeccccc-CCHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIG-IDSDRFVRALELPQVQDHINELKERFA-GRKVMLGVDRLDMI-KGIPQKILAF 396 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~-KGi~~lL~Af 396 (942)
.|. ...++.++|+| +|...+.+..... ..+++++. ++.+++++||+.+. ||+..+++|+
T Consensus 168 -~g~-----------~~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~ 229 (375)
T 3beo_A 168 -ENK-----------DESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAI 229 (375)
T ss_dssp -TTC-----------CGGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHH
T ss_pred -cCC-----------CcccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHHH
Confidence 121 23468899999 8887665321111 12334443 34567789999986 9999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
+++.+++|+++ ++ ++ ++++ .+++++++++++.. ..|+| .+.++..++..+|+.||++|+
T Consensus 230 ~~l~~~~~~~~----~i-~~-----~g~~-~~~~~~~~~~~~~~---------~~v~~-~g~~~~~~~~~~~~~ad~~v~ 288 (375)
T 3beo_A 230 KRLVDKHEDVQ----VV-YP-----VHMN-PVVRETANDILGDY---------GRIHL-IEPLDVIDFHNVAARSYLMLT 288 (375)
T ss_dssp HHHHHHCTTEE----EE-EE-----CCSC-HHHHHHHHHHHTTC---------TTEEE-ECCCCHHHHHHHHHTCSEEEE
T ss_pred HHHHhhCCCeE----EE-Ee-----CCCC-HHHHHHHHHHhhcc---------CCEEE-eCCCCHHHHHHHHHhCcEEEE
Confidence 99988888753 33 22 1221 23455555553210 13654 467888899999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCC-CCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~-~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
|| |.+++||||| +.|+|+|.. +|..+.+ ..+|++|++ |+++++++|.+++++ ++.++++.++++++.
T Consensus 289 ~s-----g~~~lEA~a~----G~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~-~~~~~~~~~~~~~~~ 357 (375)
T 3beo_A 289 DS-----GGVQEEAPSL----GVPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSD-KEAHDKMSKASNPYG 357 (375)
T ss_dssp CC-----HHHHHHHHHH----TCCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHC-HHHHHHHCCCCCTTC
T ss_pred CC-----CChHHHHHhc----CCCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhC-hHhHhhhhhcCCCCC
Confidence 99 6779999999 357888864 6765555 238999987 999999999999985 445655555666666
Q ss_pred HhcCHHHHHHHHHHH
Q 002285 555 TTHTSQEWAATFVSE 569 (942)
Q Consensus 555 ~~~~~~~W~~~fl~~ 569 (942)
..++++..++.+.+.
T Consensus 358 ~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 358 DGRASERIVEAILKH 372 (375)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 666666666655443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.74 E-value=8.5e-17 Score=172.06 Aligned_cols=187 Identities=13% Similarity=0.147 Sum_probs=122.0
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc-eEEeecc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM-WLAAENG 680 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-~liaehG 680 (942)
.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..+++ .+|+.||
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nG 67 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDE--------------QKQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNG 67 (258)
T ss_dssp CCEEEECTBTTTBCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGG
T ss_pred ceEEEEeCCCCCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECCC
Confidence 479999999999986 34689999999999987 6999999999999998888777642 4789999
Q ss_pred eEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEE----------------EEeccchHHh---
Q 002285 681 MFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVW----------------NYKYADLEFG--- 741 (942)
Q Consensus 681 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~----------------hyr~ad~e~~--- 741 (942)
+++...+..... ...+ .+.+.++++.+.+..-...+......... .+....+.+.
T Consensus 68 a~i~~~~~~i~~---~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T 2pq0_A 68 QYVVFEGNVLYK---QPLR---REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENK 141 (258)
T ss_dssp TEEEETTEEEEE---CCCC---HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGS
T ss_pred CEEEECCEEEEE---ecCC---HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhcc
Confidence 999764332111 1122 35556666655432111111111000000 0000000000
Q ss_pred ----------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC
Q 002285 742 ----------RLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF 810 (942)
Q Consensus 742 ----------~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~ 810 (942)
......+.+.+ ..+.+ ..+..++||.|+++|||.|++.++++++ ++++.+++|||
T Consensus 142 ~~~k~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~GD- 207 (258)
T 2pq0_A 142 DIYQALLFCRAEEEEPYVRNY-------PEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLG------IDKKDVYAFGD- 207 (258)
T ss_dssp CCCEEEECSCHHHHHHHHHHC-------TTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHT------CCGGGEEEECC-
T ss_pred CceEEEEECCHHHHHHHHHhC-------CCeEEEEeCCceEEEEECCCChHHHHHHHHHHhC------CCHHHEEEECC-
Confidence 00011111111 12443 3467899999999999999999999998 67899999999
Q ss_pred CCCCHHHHHhcCc
Q 002285 811 LQKDEDIYTFFEP 823 (942)
Q Consensus 811 d~nDEdMF~~~~~ 823 (942)
+.||.+||+.++.
T Consensus 208 s~NDi~ml~~ag~ 220 (258)
T 2pq0_A 208 GLNDIEMLSFVGT 220 (258)
T ss_dssp SGGGHHHHHHSSE
T ss_pred cHHhHHHHHhCCc
Confidence 9999999999853
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=179.87 Aligned_cols=275 Identities=13% Similarity=0.121 Sum_probs=173.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHh-h-hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSV-L-AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~l-l-~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|+.....++..+..+..++|+.+..|... +...+..++ ..+.+.+ . .+|.|...+....+.|.+
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~l~~---- 158 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYSPWP--EEANRTLTGHLAMYHFSPTETSRQNLLR---- 158 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTSSTT--HHHHHHHHHTTCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccCCCc--hHhhHHHHHhhccEEEcCcHHHHHHHHH----
Confidence 679999997533334444433445788888777532 112111122 2233332 2 389988888766555432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHhc----CC-ceEEEeeccccc-CCHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERFA----GR-KVMLGVDRLDMI-KGIPQK 392 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~iIl~VgRLd~~-KGi~~l 392 (942)
.|. ...++.++|+|+ |...+.+....+ .......++++++ ++ .+++++||+.+. ||+..+
T Consensus 159 -~g~-----------~~~~i~vi~n~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~l 225 (384)
T 1vgv_A 159 -ENV-----------ADSRIFITGNTVIDALLWVRDQVMS-SDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEI 225 (384)
T ss_dssp -TTC-----------CGGGEEECCCHHHHHHHHHHHHTTT-CHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHH
T ss_pred -cCC-----------ChhhEEEeCChHHHHHHhhhhcccc-chhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHH
Confidence 121 234678899995 543332110000 0001124455432 33 467899999987 999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|+.++.+++|+++ |+.++ |+++ .++++++++++.. ..|+| .+.++.+++..+|+.||
T Consensus 226 i~a~~~l~~~~~~~~----l~i~~----g~~~---~~~~~l~~~~~~~---------~~v~~-~g~~~~~~~~~~~~~ad 284 (384)
T 1vgv_A 226 CHALADIATTHQDIQ----IVYPV----HLNP---NVREPVNRILGHV---------KNVIL-IDPQEYLPFVWLMNHAW 284 (384)
T ss_dssp HHHHHHHHHHCTTEE----EEEEC----CBCH---HHHHHHHHHHTTC---------TTEEE-ECCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHhhCCCeE----EEEEc----CCCH---HHHHHHHHHhhcC---------CCEEE-eCCCCHHHHHHHHHhCc
Confidence 999999999888753 44332 2223 2345555554211 13654 45677899999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCC-CCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH 549 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~-~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 549 (942)
++|+|| |.+++||||| +.|+|+|.. +|..+.+ | +|++|+| |+++++++|.++|++ ++.++++.++
T Consensus 285 ~~v~~S-----g~~~lEA~a~----G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d-~~~~~~~~~~ 352 (384)
T 1vgv_A 285 LILTDS-----GGIQEEAPSL----GKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKD-ENEYQAMSRA 352 (384)
T ss_dssp EEEESS-----STGGGTGGGG----TCCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHC-HHHHHHHHSS
T ss_pred EEEECC-----cchHHHHHHc----CCCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhC-hHHHhhhhhc
Confidence 999999 4458999999 357888987 6665555 5 8999988 999999999999985 4556666666
Q ss_pred HhHHHHhcCHHHHHHHHHHH
Q 002285 550 NFMHVTTHTSQEWAATFVSE 569 (942)
Q Consensus 550 ~~~~v~~~~~~~W~~~fl~~ 569 (942)
++++...++++..++.+++.
T Consensus 353 ~~~~~~~~~~~~i~~~~~~~ 372 (384)
T 1vgv_A 353 HNPYGDGQACSRILEALKNN 372 (384)
T ss_dssp CCTTCCSCHHHHHHHHHHHT
T ss_pred cCCCcCCCHHHHHHHHHHHH
Confidence 66665566666666655443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.4e-18 Score=194.32 Aligned_cols=168 Identities=10% Similarity=-0.042 Sum_probs=126.3
Q ss_pred EEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEc
Q 002285 338 RVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAV 417 (942)
Q Consensus 338 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~ 417 (942)
++.++|||||.+.|.+.... ...++++|+++||+.+.||+ ++.+.+.+|+++ |+++
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~iv-- 253 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVI-- 253 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEE--
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEE--
Confidence 78999999999888654221 11234789999999999999 455566678754 5555
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHH------
Q 002285 418 PTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFV------ 491 (942)
Q Consensus 418 psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEam------ 491 (942)
|+++ +.+. +.. ..|+| .|.++.+++.++|+.||++|+||..||||++++|||
T Consensus 254 ---G~g~------------~~~~----~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 254 ---GSGM------------GRHP----GYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp ---SCSS------------CCCT----TCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred ---eCch------------HHhc----CCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 3443 1111 111 13665 588999999999999999999999999999999999
Q ss_pred -hhccCCCceEEEeCCCCcccccCCceEE-ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHH
Q 002285 492 -ACQASKKGVLILSEFAGAAQSLGAGAIL-VNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSE 569 (942)
Q Consensus 492 -A~~~~~~G~lIlSe~~G~~~~lg~~gll-VnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 569 (942)
|| +.|+|+|+. ... +.+|++ |+|.|++++|++|.++++++. +...+.++++..++++++.
T Consensus 312 la~----G~PVIas~~--v~~--~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 312 DFF----GLPAVCPNA--VVG--PYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp HHH----TCCEEEEGG--GTC--SCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSCCCBHHHHHHHHHCG
T ss_pred hhC----CCcEEEehh--ccc--CcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhhcCCHHHHHHHHHHh
Confidence 99 357888876 111 568999 999999999999999998774 1334678888888777543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.72 E-value=4.2e-17 Score=174.41 Aligned_cols=177 Identities=17% Similarity=0.131 Sum_probs=117.2
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|++|+||||+ . ...++ +++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl-~--------------~~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~N 64 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P--------------GYEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (249)
T ss_dssp EEEEEECCSTTTC-T--------------TSCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred ccEEEEeCCCCcc-C--------------CCCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeC
Confidence 3799999999999 4 12343 49999999987 699999999999999999888774 4899999
Q ss_pred ceEEEeCC-------------CceeecccCCCChhHHHHHHHHHHHHHhcCCCeeee-----------------------
Q 002285 680 GMFLRLTT-------------GEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFE----------------------- 723 (942)
Q Consensus 680 G~~ir~~~-------------~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE----------------------- 723 (942)
|+++...+ +.+... ...+ .+.+.++++.+.+.. +..+.
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~i~~--~~l~---~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (249)
T 2zos_A 65 GSAIFIPKGYFPFDVKGKEVGNYIVIE--LGIR---VEKIREELKKLENIY-GLKYYGNSTKEEIEKFTGMPPELVPLAM 138 (249)
T ss_dssp TTEEECCTTCCC------CCCCCCEEE--CSCC---HHHHHHHHHHHHHHH-TCEEGGGSCHHHHHHHHCCCTTTHHHHH
T ss_pred CeEEEccCCcccccccccccCceEEEe--cCCC---HHHHHHHHHHHHhhc-CEEEecCCCHHHHHHHhCCChhHhhhhh
Confidence 99998542 222211 1122 233444444332210 00000
Q ss_pred eecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCC-CCc
Q 002285 724 VRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKT-PID 802 (942)
Q Consensus 724 ~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~-~~d 802 (942)
.+.....+.+.. +++. .+.+ .. ..+.++.+..++||.| ++|||.||++++++++ + +.+
T Consensus 139 ~~~~~~~~~~~~-~~~~--------~~~l-~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~------~~~~~ 197 (249)
T 2zos_A 139 EREYSETIFEWS-RDGW--------EEVL-VE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYK------RLGQI 197 (249)
T ss_dssp CCSSCEEEEECS-SSCH--------HHHH-HH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHH------TTSCE
T ss_pred hhhhcCceEecC-CHHH--------HHHH-Hh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhc------cCCCc
Confidence 000000111111 1110 1222 11 1356666667899999 9999999999999987 4 579
Q ss_pred eEEEEeCCCCCCHHHHHhcCc
Q 002285 803 YVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 803 ~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+++||| +.||++||+.++.
T Consensus 198 ~viafGD-~~NDi~Ml~~ag~ 217 (249)
T 2zos_A 198 ESYAVGD-SYNDFPMFEVVDK 217 (249)
T ss_dssp EEEEEEC-SGGGHHHHTTSSE
T ss_pred eEEEECC-CcccHHHHHhCCc
Confidence 9999999 9999999999975
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-17 Score=176.33 Aligned_cols=188 Identities=15% Similarity=0.209 Sum_probs=118.9
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCC-CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC----c-eEE
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPK-LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN----M-WLA 676 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~-~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l-~li 676 (942)
|+|+||+||||++. +.. +++.++++|++|.+ .|+.|+++|||+ ..+.+++..++ + ++|
T Consensus 3 kli~~DlDGTLl~~--------------~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i 66 (261)
T 2rbk_A 3 KALFFDIDGTLVSF--------------ETHRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYI 66 (261)
T ss_dssp CEEEECSBTTTBCT--------------TTSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEE
T ss_pred cEEEEeCCCCCcCC--------------CCCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEE
Confidence 79999999999986 334 89999999999997 699999999999 88877766554 3 689
Q ss_pred eecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEE---------EEEec--------cchH
Q 002285 677 AENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV---------WNYKY--------ADLE 739 (942)
Q Consensus 677 aehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~---------~hyr~--------ad~e 739 (942)
++||+.+... +..... ...+. +.+.++++...+..-...+........ .+++. ..++
T Consensus 67 ~~nGa~i~~~-~~~i~~--~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (261)
T 2rbk_A 67 TMNGAYCFVG-EEVIYK--SAIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFE 140 (261)
T ss_dssp EGGGTEEEET-TEEEEE--CCCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHH
T ss_pred EeCCEEEEEC-CEEEEe--cCCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccc
Confidence 9999999763 322111 11232 344455544433211111111110000 00000 0000
Q ss_pred HhH---------HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 740 FGR---------LQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 740 ~~~---------~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
+.. ....+....+ ...+. .+.++. +..++||.|.+++||.+++.++++++ ++++.+++|||
T Consensus 141 ~~~~~~~~k~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD 211 (261)
T 2rbk_A 141 EASNKEVIQMTPFITEEEEKEV-LPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD 211 (261)
T ss_dssp HHHTSCCSEEEECCCHHHHHHH-GGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC
T ss_pred hhccCceeEEEEEeCHHHHHHH-HHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcC------CCHHHEEEECC
Confidence 000 0000011122 22122 255544 57889999999999999999999998 56899999999
Q ss_pred CCCCCHHHHHhcC
Q 002285 810 FLQKDEDIYTFFE 822 (942)
Q Consensus 810 ~d~nDEdMF~~~~ 822 (942)
+.||.+|++.++
T Consensus 212 -~~nD~~~~~~ag 223 (261)
T 2rbk_A 212 -GGNDISMLRHAA 223 (261)
T ss_dssp -SGGGHHHHHHSS
T ss_pred -CHHHHHHHHHcC
Confidence 999999999885
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=161.23 Aligned_cols=142 Identities=17% Similarity=0.151 Sum_probs=111.3
Q ss_pred cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCccc
Q 002285 372 AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVP 451 (942)
Q Consensus 372 ~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~p 451 (942)
.++++|+++||+.+.||+..+++|++++ |+++ |+++| +++...++++.+.++ +.+.. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G-----~~~~~~~l~~~~~~~--~~~l~------~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVG-----WFSKGDHAERYARKI--MKIAP------DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEB-----CCCTTSTHHHHHHHH--HHHSC------TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEe-----cCccHHHHHHHHHhh--hcccC------Cc
Confidence 3678999999999999999999999987 5654 44444 333322333333321 21111 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 529 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA 529 (942)
|+| .+.++.+++..+|+.||++|+||..||||++++||||| +.|+|+|+.+|..+.+ +.+|+++ +.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~----G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS----GKPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT----TCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc----CCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 554 58899999999999999999999999999999999999 3579999988888877 5689999 99999999
Q ss_pred HHHHHHhCCCH
Q 002285 530 SSIGYALNMPA 540 (942)
Q Consensus 530 ~aI~~aL~m~~ 540 (942)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998775
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7e-16 Score=165.45 Aligned_cols=179 Identities=17% Similarity=0.166 Sum_probs=116.9
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFL 683 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~i 683 (942)
||+||+||||++. . .+++.+.++|++|.+ .|+.|+|+|||+...+. .++. ..++|++||+.+
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~~-~~~~i~~nGa~i 63 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALGL-EPPFIVENGGGL 63 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTTC-CSSEEEGGGTEE
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcCC-CCcEEEECCcEE
Confidence 7999999999986 4 688999999999987 69999999999999998 3332 457999999999
Q ss_pred EeCCCc----e-----eecccCCCChhHHHHHHHHHHHHHhcCCCee-e-eee----------------------cceEE
Q 002285 684 RLTTGE----W-----MTTMPENLNMDWVDSVKHVFEYFTERTPRSH-F-EVR----------------------ETSLV 730 (942)
Q Consensus 684 r~~~~~----w-----~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~-i-E~K----------------------~~sl~ 730 (942)
...+.. | ..+...... .+.+.++++.+.+...-.+ . ... .....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (259)
T 3zx4_A 64 YLPRDWPVRAGRPKGGYRVVSLAWP---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDET 140 (259)
T ss_dssp EEETTCSSCCSEEETTEEEEECSCC---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEE
T ss_pred EeCCCCcccccccCCceEEEEcCCC---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhcccccee
Confidence 854332 0 011101122 2334444443332100000 0 000 00000
Q ss_pred EEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCC--ceEEEEe
Q 002285 731 WNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPI--DYVLCIG 808 (942)
Q Consensus 731 ~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~--d~vl~iG 808 (942)
+.+ .+ + ....+.+.+ .. ..+.++.+..++|+.|+ ++||.|+++++++++ +++ +.+++||
T Consensus 141 ~~~--~~-~----~~~~~~~~l-~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~------i~~~~~~~~~~G 201 (259)
T 3zx4_A 141 LVL--CP-E----EVEAVLEAL-EA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALWP------DPEEARFAVGLG 201 (259)
T ss_dssp BCC--CT-T----THHHHHHHH-HH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTCS------SHHHHTSEEEEE
T ss_pred EEe--Cc-H----HHHHHHHHH-HH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHhC------CCCCCceEEEEe
Confidence 001 11 1 112333334 21 14677777677899999 999999999999998 456 8999999
Q ss_pred CCCCCCHHHHHhcCc
Q 002285 809 HFLQKDEDIYTFFEP 823 (942)
Q Consensus 809 D~d~nDEdMF~~~~~ 823 (942)
| +.||++||++++.
T Consensus 202 D-~~nD~~m~~~ag~ 215 (259)
T 3zx4_A 202 D-SLNDLPLFRAVDL 215 (259)
T ss_dssp S-SGGGHHHHHTSSE
T ss_pred C-CHHHHHHHHhCCC
Confidence 9 9999999999854
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.3e-15 Score=160.30 Aligned_cols=193 Identities=13% Similarity=0.179 Sum_probs=126.9
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHH-------HhhhCCCCeEEEEcCCChhhHHHhhcccC-
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLK-------RLCDDPMTTVVVLSGSDRNVLDDNFGEYN- 672 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~-------~L~~d~g~~V~IvSGR~~~~L~~~~~~~~- 672 (942)
..++|+||+||||++. . +++.+..+|. +++...+..++++|||+...+..++..++
T Consensus 21 ~~kliifDlDGTLlds--------------~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPH--------------T--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF 84 (289)
T ss_dssp CSEEEEEETBTTTBCS--------------S--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEECCCCCcCC--------------C--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhcc
Confidence 4689999999999986 1 4565666555 35556899999999999999998877653
Q ss_pred ----ceEEeecceEEEeC--CCc------eeecccCCCChhHHHHHHHHHHHHHhcC-----CCeeeeeecceEEEEEec
Q 002285 673 ----MWLAAENGMFLRLT--TGE------WMTTMPENLNMDWVDSVKHVFEYFTERT-----PRSHFEVRETSLVWNYKY 735 (942)
Q Consensus 673 ----l~liaehG~~ir~~--~~~------w~~~~~~~~~~~w~~~v~~il~~~~~r~-----~Gs~iE~K~~sl~~hyr~ 735 (942)
..+++.+|.++... ++. |....... ...+.+.++++.+.++. ..+..+.+...+.+||+.
T Consensus 85 ~~~~~~~i~~~g~~i~~~~~ng~~~~~~~~~~~~~~~---~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~ 161 (289)
T 3gyg_A 85 RYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEG---FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQE 161 (289)
T ss_dssp CBCCSEEEETTTTEEEECCSSSTTEECHHHHHHHHTT---CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEEC
T ss_pred CCCCCeEeecCCceEEEEcCCCcEeecCchhhhhccc---CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEec
Confidence 34888888877641 121 22111011 12456677777765441 112224455677889987
Q ss_pred cchHHhHHHHHHHHHHHhcCCCCCCCeEEEEc---------CcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEE
Q 002285 736 ADLEFGRLQARDILQHLWSGPISNASVDVVQG---------GRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLC 806 (942)
Q Consensus 736 ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G---------~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~ 806 (942)
.++.........+...+ ... +....+... ...+|+.|.+.+||.+++++++.++ ++++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~l-~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~------~~~~~~~~ 232 (289)
T 3gyg_A 162 QDEINDKKNLLAIEKIC-EEY--GVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYN------LNTERAIA 232 (289)
T ss_dssp CCHHHHHHHHHHHHHHH-HHH--TEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccccchHHHHHHHHHH-HHc--CCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcC------CChhhEEE
Confidence 65432111112222222 110 112233332 2689999999999999999999998 56889999
Q ss_pred EeCCCCCCHHHHHhcC
Q 002285 807 IGHFLQKDEDIYTFFE 822 (942)
Q Consensus 807 iGD~d~nDEdMF~~~~ 822 (942)
||| +.||++|++.++
T Consensus 233 ~GD-s~~D~~~~~~ag 247 (289)
T 3gyg_A 233 FGD-SGNDVRMLQTVG 247 (289)
T ss_dssp EEC-SGGGHHHHTTSS
T ss_pred EcC-CHHHHHHHHhCC
Confidence 999 999999998874
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.1e-15 Score=176.78 Aligned_cols=200 Identities=12% Similarity=0.018 Sum_probs=146.5
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
.++.++|+++++....+..... ..|+++ ++.++|+++||+.+ ||++.+|+|+.++++++|+++ |++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEE
Confidence 5788999966543221110100 122333 34567889999999 999999999999999999864 444
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
+|. +++.. +++++++.+.+... ..|+| .|.++.+++..+|+.|||||+||.+ |||++++|||||
T Consensus 412 ~G~----~g~~~----~~l~~~~~~~~l~~-----~~v~~-~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~- 475 (568)
T 2vsy_A 412 LSG----PGEAD----ARLRAFAHAQGVDA-----QRLVF-MPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT- 475 (568)
T ss_dssp ECC----STTHH----HHHHHHHHHTTCCG-----GGEEE-ECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT-
T ss_pred ecC----CHHHH----HHHHHHHHHcCCCh-----hHEEe-eCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC-
Confidence 431 55543 44455554433210 12654 5789999999999999999999999 999999999999
Q ss_pred cCCCceEEE-------eCCC-------CcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH---Hhc
Q 002285 495 ASKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV---TTH 557 (942)
Q Consensus 495 ~~~~G~lIl-------Se~~-------G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v---~~~ 557 (942)
+.|||+ |+.+ |+.+.+ .+ |+++++++|.+++++ ++.++++.+++++.+ ..|
T Consensus 476 ---G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 476 ---GCPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASD-PAALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ---TCCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTT
T ss_pred ---CCCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhhcCCCC
Confidence 357888 8888 777766 22 899999999999985 456777777888888 779
Q ss_pred CHHHHHHHHHHHHHHhHHH
Q 002285 558 TSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 558 ~~~~W~~~fl~~L~~~~~~ 576 (942)
++..+++.+++.+.+....
T Consensus 544 ~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 544 HMDGFADDFGALLQALARR 562 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999998887766543
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=162.68 Aligned_cols=247 Identities=15% Similarity=0.108 Sum_probs=151.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|++....++..+..+..++|+.+ .|.++.+...+.. +.....+.++ .+|.+...+....+.+.+
T Consensus 91 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~---- 163 (376)
T 1v4v_A 91 GADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKEP--FPEEANRRLTDVLTDLDFAPTPLAKANLLK---- 163 (376)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTSS--TTHHHHHHHHHHHCSEEEESSHHHHHHHHT----
T ss_pred CCCEEEEeCChHHHHHHHHHHHHhCCCEEE-EeCCCccccccCC--CchHHHHHHHHHHhceeeCCCHHHHHHHHH----
Confidence 679999998755555544433344677764 4544432222111 2222333222 378877777655554432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHhc-CCceEEEeecccccCCHHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERFA-GRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
.| ....++.++|+++ |...+... ...++++++ ++.+++++||+...||+..+++|++
T Consensus 164 -~g-----------~~~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a~~ 222 (376)
T 1v4v_A 164 -EG-----------KREEGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALK 222 (376)
T ss_dssp -TT-----------CCGGGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHH
T ss_pred -cC-----------CCcceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccchHHHHHHHHHHH
Confidence 11 1235678888864 54332111 001222333 3456678999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
++.+++|+++ ++.++ |+++ .++++++++++. . ..|+| .+.++..++..+|+.||++|.|
T Consensus 223 ~l~~~~~~~~----lv~~~----g~~~---~~~~~l~~~~~~----~-----~~v~~-~g~~g~~~~~~~~~~ad~~v~~ 281 (376)
T 1v4v_A 223 RVAEAFPHLT----FVYPV----HLNP---VVREAVFPVLKG----V-----RNFVL-LDPLEYGSMAALMRASLLLVTD 281 (376)
T ss_dssp HHHHHCTTSE----EEEEC----CSCH---HHHHHHHHHHTT----C-----TTEEE-ECCCCHHHHHHHHHTEEEEEES
T ss_pred HHHhhCCCeE----EEEEC----CCCH---HHHHHHHHHhcc----C-----CCEEE-ECCCCHHHHHHHHHhCcEEEEC
Confidence 9998888864 44332 3333 234555555421 0 13655 4567788999999999999999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCC-CCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHL 548 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~-~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 548 (942)
| +|+ .+||||| +.|+|++.. +|..+.+ +.+|++|+ .|+++++++|.++|++ ++.++++.+
T Consensus 282 S--~g~---~lEA~a~----G~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d-~~~~~~~~~ 343 (376)
T 1v4v_A 282 S--GGL---QEEGAAL----GVPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLEN-PEELSRMRK 343 (376)
T ss_dssp C--HHH---HHHHHHT----TCCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTC-HHHHHHHHH
T ss_pred C--cCH---HHHHHHc----CCCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhC-hHhhhhhcc
Confidence 9 543 7899999 346777754 5554444 34788886 4999999999999985 444544443
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=162.45 Aligned_cols=250 Identities=14% Similarity=0.045 Sum_probs=160.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|...... +..+..+..++|+.++.|..+|..- ..++ ...+|.+...+.
T Consensus 96 ~pDvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~~--------~~~~--~~~~d~v~~~~~-------------- 150 (364)
T 1f0k_A 96 KPDVVLGMGGYVSG-PGGLAAWSLGIPVVLHEQNGIAGLT--------NKWL--AKIATKVMQAFP-------------- 150 (364)
T ss_dssp CCSEEEECSSTTHH-HHHHHHHHTTCCEEEEECSSSCCHH--------HHHH--TTTCSEEEESST--------------
T ss_pred CCCEEEEeCCcCch-HHHHHHHHcCCCEEEEecCCCCcHH--------HHHH--HHhCCEEEecCh--------------
Confidence 67999999754332 3333233346788888887665310 0111 012454432111
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCc-eEEEeecccccCCHHHHHHHHHHh
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRK-VMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
.. +. ++.++|+|||.+.|.+. .+ ...+ .. .+++ +++++||+.+.||++.+++|++++
T Consensus 151 ------~~--~~----~~~~i~n~v~~~~~~~~--~~-----~~~~--~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l 209 (364)
T 1f0k_A 151 ------GA--FP----NAEVVGNPVRTDVLALP--LP-----QQRL--AGREGPVRVLVVGGSQGARILNQTMPQVAAKL 209 (364)
T ss_dssp ------TS--SS----SCEECCCCCCHHHHTSC--CH-----HHHH--TTCCSSEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred ------hh--cC----CceEeCCccchhhcccc--hh-----hhhc--ccCCCCcEEEEEcCchHhHHHHHHHHHHHHHh
Confidence 00 11 46689999998876431 11 1111 12 2445 455667999999999999999988
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+ + +.++.++ |+++ ++ ++++++.+.+. ..|.|+ +.+ +++..+|+.||++|+||
T Consensus 210 ~~---~----~~~l~i~----G~~~-~~----~l~~~~~~~~~-------~~v~~~-g~~--~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 210 GD---S----VTIWHQS----GKGS-QQ----SVEQAYAEAGQ-------PQHKVT-EFI--DDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp GG---G----EEEEEEC----CTTC-HH----HHHHHHHHTTC-------TTSEEE-SCC--SCHHHHHHHCSEEEECC-
T ss_pred cC---C----cEEEEEc----CCch-HH----HHHHHHhhcCC-------CceEEe-cch--hhHHHHHHhCCEEEECC-
Confidence 54 2 3433333 3443 23 34444444321 124544 555 78999999999999999
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCccc-------cc--CCceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHH
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGAAQ-------SL--GAGAILVNPWN--ITEVASSIGYALNMPADEREKRHL 548 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~-------~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~ 548 (942)
| |++++|||+| +.|+|+|..+|... .+ ...|++++|.| +++++++|.++ +++.++++.+
T Consensus 263 --g-~~~~~EAma~----G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~ 332 (364)
T 1f0k_A 263 --G-ALTVSEIAAA----GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAE 332 (364)
T ss_dssp --C-HHHHHHHHHH----TCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHH
T ss_pred --c-hHHHHHHHHh----CCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 9999999999 35789998887532 34 34599999988 99999999988 5667777777
Q ss_pred HHhHHHHhcCHHHHHHHHHHHHHHhH
Q 002285 549 HNFMHVTTHTSQEWAATFVSELNDTI 574 (942)
Q Consensus 549 ~~~~~v~~~~~~~W~~~fl~~L~~~~ 574 (942)
++++++..++++.-++.+++.+++..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 333 RARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred HHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 78888888888888887776665543
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.2e-14 Score=160.31 Aligned_cols=244 Identities=11% Similarity=-0.009 Sum_probs=152.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHH-hhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS-VLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~-ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+|+++.++++. .++..... ++.+..+. +.. +. +.+. +..+|.|..++....+.|.+
T Consensus 111 ~pDiv~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~l~~----- 170 (374)
T 2xci_A 111 KPKALIVVEREFWP--SLIIFTKV--PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEKFKT----- 170 (374)
T ss_dssp CCSEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHHHHT-----
T ss_pred CCCEEEEECccCcH--HHHHHHhC--CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 46999988777653 34433222 44433222 211 01 2222 34689999999887766532
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
+ |-. +|.++|+|. |..... + ++.+ ..++++++++ ..||+..+|+|+.++.
T Consensus 171 ~------------g~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~--~~k~~~~ll~A~~~l~ 220 (374)
T 2xci_A 171 F------------GAK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSI--HTGEVEIILKAFKEIK 220 (374)
T ss_dssp T------------TCC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEE--CGGGHHHHHHHHHHHH
T ss_pred c------------CCC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeC--CCchHHHHHHHHHHHH
Confidence 1 112 677888873 221110 0 0011 1257777776 3589999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccC--CcCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYG--TLTTVPIHHLDRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~--~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pS 478 (942)
+++|+++ |+++ |++++.. +++++++.+.+..+. ..+...|. +.+. .+++..+|+.||++++||
T Consensus 221 ~~~p~~~----lviv-----G~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~aDv~vl~s 285 (374)
T 2xci_A 221 KTYSSLK----LILV-----PRHIENA---KIFEKKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVGKIAIVGG 285 (374)
T ss_dssp TTCTTCE----EEEE-----ESSGGGH---HHHHHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGEEEEEECS
T ss_pred hhCCCcE----EEEE-----CCCHHHH---HHHHHHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhCCEEEECC
Confidence 8899865 4444 4555431 234444444332210 00001244 3443 378999999999988876
Q ss_pred C-CCCCChhHHHHHhhccCCCceEEEe-CCCCccccc---CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 479 L-RDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 479 l-~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
. .|++|++++||||| +.|+|++ +..|+.+.+ +.+|.++.+.|++++|++|.++|++ +.|+++.++++++
T Consensus 286 s~~e~gg~~~lEAmA~----G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~~ar~~ 359 (374)
T 2xci_A 286 TFVNIGGHNLLEPTCW----GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEEKSREI 359 (374)
T ss_dssp SSSSSCCCCCHHHHTT----TCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHHHHHHH
T ss_pred cccCCCCcCHHHHHHh----CCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHHHHHHH
Confidence 5 47789999999999 2456655 456666544 2578899999999999999999984 5677777778777
Q ss_pred HHh
Q 002285 554 VTT 556 (942)
Q Consensus 554 v~~ 556 (942)
+++
T Consensus 360 ~~~ 362 (374)
T 2xci_A 360 KGC 362 (374)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.8e-11 Score=135.58 Aligned_cols=253 Identities=17% Similarity=0.179 Sum_probs=157.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHh--hhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSV--LAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|+.-...++..+..+..++|+++. |.+..+...+. ++..++.+-+ ..+|++...+....++|.+
T Consensus 111 kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~-~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l~~---- 183 (396)
T 3dzc_A 111 QPDVVLVHGDTATTFAASLAAYYQQIPVGHV-EAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANLLQ---- 183 (396)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHTTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEECCchhHHHHHHHHHHhCCCEEEE-ECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH----
Confidence 6799999986666666556556668888754 33332322222 3445555554 2479988888887777653
Q ss_pred HhccccCCCceecCCeeeEEEEeeC-ccCccccchhcCChhhHHHHHHHHHHhc----CCce-EEEeecccc-cCCHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPI-GIDSDRFVRALELPQVQDHINELKERFA----GRKV-MLGVDRLDM-IKGIPQK 392 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~----~~~i-Il~VgRLd~-~KGi~~l 392 (942)
.|. ...+|.++++ ++|...+..... ........+++++++ ++++ ++..+|... .||+..+
T Consensus 184 -~G~-----------~~~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~l 250 (396)
T 3dzc_A 184 -ENY-----------NAENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERI 250 (396)
T ss_dssp -TTC-----------CGGGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHH
T ss_pred -cCC-----------CcCcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHH
Confidence 222 2346777776 456433321100 000011245666654 3454 445667653 4889999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|++++.+++|+++ ++.++ +..+. +++.++++. +. ...|++ .++++..++..+|+.||
T Consensus 251 l~A~~~l~~~~~~~~----~v~~~----g~~~~---~~~~l~~~~---~~------~~~v~~-~~~lg~~~~~~l~~~ad 309 (396)
T 3dzc_A 251 CQALITTAEQHPECQ----ILYPV----HLNPN---VREPVNKLL---KG------VSNIVL-IEPQQYLPFVYLMDRAH 309 (396)
T ss_dssp HHHHHHHHHHCTTEE----EEEEC----CBCHH---HHHHHHHHT---TT------CTTEEE-ECCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCCce----EEEEe----CCChH---HHHHHHHHH---cC------CCCEEE-eCCCCHHHHHHHHHhcC
Confidence 999999999888853 44332 22232 344444432 11 123554 46788889999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEe-CCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
++|.+| | |++ +||++| +-|+|++ +.++..+.+ | .+++|++ |.++++++|.++|+++ +.++++.
T Consensus 310 ~vv~~S---G-g~~-~EA~a~----G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d~~~l~~ai~~ll~d~-~~~~~m~ 375 (396)
T 3dzc_A 310 IILTDS---G-GIQ-EEAPSL----GKPVLVMRETTERPEAVAAG-TVKLVGT-NQQQICDALSLLLTDP-QAYQAMS 375 (396)
T ss_dssp EEEESC---S-GGG-TTGGGG----TCCEEECCSSCSCHHHHHHT-SEEECTT-CHHHHHHHHHHHHHCH-HHHHHHH
T ss_pred EEEECC---c-cHH-HHHHHc----CCCEEEccCCCcchHHHHcC-ceEEcCC-CHHHHHHHHHHHHcCH-HHHHHHh
Confidence 999999 6 665 999999 3577777 455544444 4 5677765 8999999999999853 3444433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.9e-10 Score=129.07 Aligned_cols=250 Identities=14% Similarity=0.134 Sum_probs=153.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|+.-...++..+..+..++|+++. +.+..+...+. |+.+++.+.+. .+|++...+..+.++|.+
T Consensus 114 kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~-~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l~~---- 186 (403)
T 3ot5_A 114 NPDIVLVHGDTTTSFAAGLATFYQQKMLGHV-EAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENLLA---- 186 (403)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHHTTCEEEEE-SCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEECCchhHHHHHHHHHHhCCCEEEE-ECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH----
Confidence 6799999986555555445445567888643 33332222222 33345555433 278888888888777764
Q ss_pred HhccccCCCceecCCeeeEEEEeeC-ccCccccchhcCChhhHHHHHHHHHHhc-CCceEEEeecccc-cCCHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPI-GIDSDRFVRALELPQVQDHINELKERFA-GRKVMLGVDRLDM-IKGIPQKILAF 396 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~-~KGi~~lL~Af 396 (942)
.|. ...+|.++++ ++|...+........ ..++++. ++.+++.++|... .|++..+++|+
T Consensus 187 -~Gi-----------~~~~i~vvGn~~~D~~~~~~~~~~~~------~~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~ 248 (403)
T 3ot5_A 187 -EGK-----------DPATIFVTGNTAIDALKTTVQKDYHH------PILENLGDNRLILMTAHRRENLGEPMQGMFEAV 248 (403)
T ss_dssp -TTC-----------CGGGEEECCCHHHHHHHHHSCTTCCC------HHHHSCTTCEEEEECCCCHHHHTTHHHHHHHHH
T ss_pred -cCC-----------CcccEEEeCCchHHHHHhhhhhhcch------HHHHhccCCCEEEEEeCcccccCcHHHHHHHHH
Confidence 232 2346777776 567654432110000 1222233 3445667888754 37899999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
.++.+++|+++ ++.++. ..+ .+++.+++..+ . +..|+ +.++++..++..+|+.||++|.
T Consensus 249 ~~l~~~~~~~~----~v~~~~----~~~---~~~~~l~~~~~---~------~~~v~-l~~~l~~~~~~~l~~~ad~vv~ 307 (403)
T 3ot5_A 249 REIVESREDTE----LVYPMH----LNP---AVREKAMAILG---G------HERIH-LIEPLDAIDFHNFLRKSYLVFT 307 (403)
T ss_dssp HHHHHHCTTEE----EEEECC----SCH---HHHHHHHHHHT---T------CTTEE-EECCCCHHHHHHHHHHEEEEEE
T ss_pred HHHHHhCCCce----EEEecC----CCH---HHHHHHHHHhC---C------CCCEE-EeCCCCHHHHHHHHHhcCEEEE
Confidence 99999998853 443322 223 23444444321 1 12355 4567888999999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEe-CCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHL 548 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 548 (942)
+| |-+.+||++| +-|+|++ +.++..+.+ ..++++|.+ |.++++++|.++|+++ +.++++.+
T Consensus 308 ~S-----Gg~~~EA~a~----g~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~~ 370 (403)
T 3ot5_A 308 DS-----GGVQEEAPGM----GVPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMAQ 370 (403)
T ss_dssp CC-----HHHHHHGGGT----TCCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHHH
T ss_pred CC-----ccHHHHHHHh----CCCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHHh
Confidence 98 3344999999 3467777 444444444 237888876 9999999999999753 34444333
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=3.3e-10 Score=120.04 Aligned_cols=60 Identities=15% Similarity=0.074 Sum_probs=47.6
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcccC
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGEYN 672 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~ 672 (942)
..|+|+||+||||++.. + ....+.+...++++.|.+ .|..++++| ||+...+.+.+..++
T Consensus 11 ~~k~i~fDlDGTLl~s~--~---------~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~~g 73 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSG--A---------GGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQRLG 73 (271)
T ss_dssp TCCEEEECCBTTTEECC--T---------TTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHHTT
T ss_pred cCCEEEEeCCCeEEecC--C---------CCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHHCC
Confidence 35899999999999851 0 023466788999999987 699999999 999998888877653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.2e-09 Score=113.59 Aligned_cols=184 Identities=13% Similarity=0.103 Sum_probs=105.7
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcccCc----
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGEYNM---- 673 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l---- 673 (942)
+.+.|+||+||||++. ..+++.++++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 16 ~~~~v~~DlDGTLl~~---------------~~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~ 79 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD---------------DSLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD 79 (271)
T ss_dssp GCCEEEECCBTTTEET---------------TEECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG
T ss_pred CCCEEEEcCcCcEEeC---------------CEECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCCh
Confidence 3567999999999975 2356889999999987 699999999 9999999888877643
Q ss_pred -eEEeecceEEEe-----CCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHH
Q 002285 674 -WLAAENGMFLRL-----TTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 674 -~liaehG~~ir~-----~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
.++++||+.+.. .+...... .. ..+.+.++.. |..+........+........+ ..+.+
T Consensus 80 ~~ii~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~~ 144 (271)
T 1vjr_A 80 DAVVTSGEITAEHMLKRFGRCRIFLL----GT----PQLKKVFEAY-----GHVIDEENPDFVVLGFDKTLTY--ERLKK 144 (271)
T ss_dssp GGEEEHHHHHHHHHHHHHCSCEEEEE----SC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHHH
T ss_pred hhEEcHHHHHHHHHHHhCCCCeEEEE----cC----HHHHHHHHHc-----CCccCCCCCCEEEEeCCCCcCH--HHHHH
Confidence 366766664321 01110000 01 1222222221 2111111111111111110001 11223
Q ss_pred HHHHHhcC----CCCCCCeEE------EEc----------CcEEEE-EECCCCHHHHHHHHHHHhcccCCCCCCCceEEE
Q 002285 748 ILQHLWSG----PISNASVDV------VQG----------GRSVEV-RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLC 806 (942)
Q Consensus 748 l~~~L~~~----~~~~~~v~v------~~G----------~~~vEV-~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~ 806 (942)
++..+ .. ++.+..... ... -...|. .+.+.+|+.+++.+++.++ ++++.+++
T Consensus 145 ~l~~l-~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~~e~i~ 217 (271)
T 1vjr_A 145 ACILL-RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG------VPKERMAM 217 (271)
T ss_dssp HHHHH-TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT------CCGGGEEE
T ss_pred HHHHH-HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhC------CCCceEEE
Confidence 33333 11 011110000 000 012355 7788999999999999998 67899999
Q ss_pred EeCCC-CCCHHHHHhcCc
Q 002285 807 IGHFL-QKDEDIYTFFEP 823 (942)
Q Consensus 807 iGD~d-~nDEdMF~~~~~ 823 (942)
||| . .||.+|++.++-
T Consensus 218 iGD-~~~nDi~~a~~aG~ 234 (271)
T 1vjr_A 218 VGD-RLYTDVKLGKNAGI 234 (271)
T ss_dssp EES-CHHHHHHHHHHHTC
T ss_pred ECC-CcHHHHHHHHHcCC
Confidence 999 9 599999999975
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=7.7e-09 Score=110.48 Aligned_cols=188 Identities=12% Similarity=0.121 Sum_probs=102.9
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhhcccCc----
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNFGEYNM---- 673 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l---- 673 (942)
+.|+|+||+||||++. . .+.++++++|++|.+ .|..|+++|| |+...+.+.+..+++
T Consensus 7 ~~kli~~DlDGTLl~~--------------~-~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~ 70 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKS--------------V-TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLEVGE 70 (268)
T ss_dssp CCSEEEEECBTTTEET--------------T-EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEcCcCcEECC--------------C-EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH
Confidence 3689999999999975 1 256789999999997 6999999999 788888777776654
Q ss_pred -eEEeecceEEEe--CCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeee-eeecceEEEEEeccchHHhHHHHHHHH
Q 002285 674 -WLAAENGMFLRL--TTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHF-EVRETSLVWNYKYADLEFGRLQARDIL 749 (942)
Q Consensus 674 -~liaehG~~ir~--~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i-E~K~~sl~~hyr~ad~e~~~~qa~el~ 749 (942)
.++..||+.... ......... .... ..+...+... |..+ ........+.-......+. ...+..
T Consensus 71 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~l~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 138 (268)
T 3qgm_A 71 DEILVATYATARFIAREKPNAKVF-TTGE----EGLIEELRLA-----GLEIVDYDEAEYLVVGSNRKINFE--LMTKAL 138 (268)
T ss_dssp GGEEEHHHHHHHHHHHHSTTCEEE-ECCC----HHHHHHHHHT-----TCEECCTTTCSEEEECCCTTCBHH--HHHHHH
T ss_pred HHeeCHHHHHHHHHHhhCCCCeEE-EEcC----HHHHHHHHHc-----CCeecCCCCCCEEEEecCCCCCHH--HHHHHH
Confidence 366666654321 000000000 0001 1222222211 1111 1111111111000000010 011111
Q ss_pred HHHhcC---CCCCCCeEE------EEcC----------cEEEE-EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 750 QHLWSG---PISNASVDV------VQGG----------RSVEV-RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 750 ~~L~~~---~~~~~~v~v------~~G~----------~~vEV-~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
..+... +..+..... ..+. ...|. ...+-.|+.+++.++++++ ++++.+++|||
T Consensus 139 ~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~------~~~~~~~~vGD 212 (268)
T 3qgm_A 139 RACLRGIRYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILG------LDAKDVAVVGD 212 (268)
T ss_dssp HHHHHTCEEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHT------CCGGGEEEEES
T ss_pred HHHhCCCcEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhC------CCchhEEEECC
Confidence 111010 111111111 1111 11345 6677889999999999998 67899999999
Q ss_pred CC-CCCHHHHHhcCc
Q 002285 810 FL-QKDEDIYTFFEP 823 (942)
Q Consensus 810 ~d-~nDEdMF~~~~~ 823 (942)
. .||..|.+.++-
T Consensus 213 -~~~~Di~~~~~~g~ 226 (268)
T 3qgm_A 213 -QIDVDVAAGKAIGA 226 (268)
T ss_dssp -CTTTHHHHHHHHTC
T ss_pred -CchHHHHHHHHCCC
Confidence 9 699999999974
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=2.7e-09 Score=113.99 Aligned_cols=188 Identities=9% Similarity=0.067 Sum_probs=104.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhhcccCc----
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNFGEYNM---- 673 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l---- 673 (942)
+.|+|+||+||||++. ..+.++++++|++|.+ .|..|+|+|| |+...+.+.+..+++
T Consensus 5 ~~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~ 68 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPATE 68 (266)
T ss_dssp CCSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH
Confidence 3689999999999975 1346789999999998 6999999988 777777777776654
Q ss_pred -eEEeecceEEEe--CCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHH
Q 002285 674 -WLAAENGMFLRL--TTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQ 750 (942)
Q Consensus 674 -~liaehG~~ir~--~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~ 750 (942)
.++..+|+.+.. ......... .... ..+.+.++.. |..+........+........+ ....+...
T Consensus 69 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 136 (266)
T 3pdw_A 69 EQVFTTSMATAQHIAQQKKDASVY-VIGE----EGIRQAIEEN-----GLTFGGENADFVVVGIDRSITY--EKFAVGCL 136 (266)
T ss_dssp GGEEEHHHHHHHHHHHHCTTCEEE-EESC----HHHHHHHHHT-----TCEECCTTCSEEEECCCTTCCH--HHHHHHHH
T ss_pred HHccCHHHHHHHHHHhhCCCCEEE-EEeC----hhHHHHHHHc-----CCccCCCCCCEEEEeCCCCCCH--HHHHHHHH
Confidence 355555543321 000000000 0001 1222333221 2222111111111110000011 11112222
Q ss_pred HHhcC---CCCCCCeEE------EEc----------CcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 751 HLWSG---PISNASVDV------VQG----------GRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 751 ~L~~~---~~~~~~v~v------~~G----------~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
.+... +..+..... ..+ ....|+.+.+..|+.+++.++++++ ++++.+++||| .
T Consensus 137 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~ 209 (266)
T 3pdw_A 137 AIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLG------TDVSETLMVGD-N 209 (266)
T ss_dssp HHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHT------CCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcC------CChhhEEEECC-C
Confidence 22111 011111110 111 0134667788899999999999998 67899999999 9
Q ss_pred -CCCHHHHHhcCc
Q 002285 812 -QKDEDIYTFFEP 823 (942)
Q Consensus 812 -~nDEdMF~~~~~ 823 (942)
.||.+|++.++-
T Consensus 210 ~~~Di~~~~~aG~ 222 (266)
T 3pdw_A 210 YATDIMAGINAGM 222 (266)
T ss_dssp TTTHHHHHHHHTC
T ss_pred cHHHHHHHHHCCC
Confidence 799999999985
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.3e-08 Score=109.46 Aligned_cols=247 Identities=13% Similarity=0.035 Sum_probs=151.1
Q ss_pred HHhhcCCCCEEEEcCCchh--hH-HHHHHhh-CCCCeEEEEeccCCCChhHhhcCCchHHHH-HHhhhccEEeecCHHHH
Q 002285 236 VNNIYEEGDVVWCHDYHLM--FL-PQCLKEY-NNNMKVGWFLHTPFPSSEIHRTLPSRTELL-RSVLAADLVGFHTYDYA 310 (942)
Q Consensus 236 i~~~~~~~DiIwvHDyhL~--ll-p~~Lr~~-~p~~~I~~flH~PfP~~e~fr~lp~r~~il-~~ll~aDlIgF~t~~~~ 310 (942)
+...++++|+|+++-+.+. .+ ..++++. ..++++.+..|--+|-. +..-+.....- .-+..||.|..++....
T Consensus 68 ~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~--~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~ 145 (339)
T 3rhz_A 68 IVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLM--FSGNFYLMDRTIAYYNKADVVVAPSQKMI 145 (339)
T ss_dssp HTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHH--CGGGGGGHHHHHHHHTTCSEEEESCHHHH
T ss_pred HHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhh--CccchhhHHHHHHHHHHCCEEEECCHHHH
Confidence 5556789999999877653 22 2344442 23799999999876522 11001111111 22346999999998766
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCH
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGI 389 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 389 (942)
+.+.+ .|. ...++. +.++ |... +. +. ....++++|+++||+....++
T Consensus 146 ~~l~~-----~G~-----------~~~ki~--~~~~~~~~~--~~---~~---------~~~~~~~~i~yaG~l~k~~~L 193 (339)
T 3rhz_A 146 DKLRD-----FGM-----------NVSKTV--VQGMWDHPT--QA---PM---------FPAGLKREIHFPGNPERFSFV 193 (339)
T ss_dssp HHHHH-----TTC-----------CCSEEE--ECCSCCCCC--CC---CC---------CCCEEEEEEEECSCTTTCGGG
T ss_pred HHHHH-----cCC-----------CcCcee--ecCCCCccC--cc---cc---------cccCCCcEEEEeCCcchhhHH
Confidence 55432 121 123443 3333 2210 00 00 011346789999999853221
Q ss_pred HHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 390 PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 390 ~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
. .+ .|+++ |+++ |+|++. ++ . .|+| .|.++.++++.+|+
T Consensus 194 ~-------~l---~~~~~----f~iv-----G~G~~~------------~l-------~--nV~f-~G~~~~~el~~~l~ 232 (339)
T 3rhz_A 194 K-------EW---KYDIP----LKVY-----TWQNVE------------LP-------Q--NVHK-INYRPDEQLLMEMS 232 (339)
T ss_dssp G-------GC---CCSSC----EEEE-----ESCCCC------------CC-------T--TEEE-EECCCHHHHHHHHH
T ss_pred H-------hC---CCCCe----EEEE-----eCCccc------------Cc-------C--CEEE-eCCCCHHHHHHHHH
Confidence 1 11 46654 4444 445431 01 1 3665 57899999999999
Q ss_pred HccEEEECCCCC---------CCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCC
Q 002285 470 ITDVALVTSLRD---------GMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNM 538 (942)
Q Consensus 470 ~ADv~v~pSl~E---------G~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 538 (942)
.+|+.++. .+ .++..+.||||| +.|+|++..++.++.+ +..|+.++ +.++++++|..+
T Consensus 233 ~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~----G~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l--- 301 (339)
T 3rhz_A 233 QGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA----GIPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV--- 301 (339)
T ss_dssp TEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH----TCCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC---
T ss_pred hCCEEEEE--CCCchhHHHHhcChHHHHHHHHc----CCCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh---
Confidence 99999987 23 357889999999 3578889988888877 56789987 578888888764
Q ss_pred CHHHHHHHHHHHhHHHHhcCHHHHHHHHHH
Q 002285 539 PADEREKRHLHNFMHVTTHTSQEWAATFVS 568 (942)
Q Consensus 539 ~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 568 (942)
.+++++++.+++++..+........++-+.
T Consensus 302 ~~~~~~~m~~na~~~a~~~~~~~f~k~~l~ 331 (339)
T 3rhz_A 302 NEDEYIELVKNVRSFNPILRKGFFTRRLLT 331 (339)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 466777777777777665554555444433
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-08 Score=107.54 Aligned_cols=188 Identities=8% Similarity=0.074 Sum_probs=104.8
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcccCc----
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGEYNM---- 673 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l---- 673 (942)
..|+|+||+||||++. +..+ ++++++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG--------------KSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp CCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred CCCEEEEeCCCceEeC--------------CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 4689999999999986 3346 899999999997 699999999 8999998888887654
Q ss_pred -eEEeecceEEEe--CCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHH
Q 002285 674 -WLAAENGMFLRL--TTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQ 750 (942)
Q Consensus 674 -~liaehG~~ir~--~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~ 750 (942)
.++..+|+.+.. ......... .... +.+.+.++.. |..+........+........+. ...+...
T Consensus 68 ~~ii~~~~~~~~~l~~~~~~~~~~-~~~~----~~l~~~l~~~-----g~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~ 135 (264)
T 3epr_A 68 ETIYTATMATVDYMNDMNRGKTAY-VIGE----EGLKKAIADA-----GYVEDTKNPAYVVVGLDWNVTYD--KLATATL 135 (264)
T ss_dssp GGEEEHHHHHHHHHHHHTCCSEEE-EESC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCHH--HHHHHHH
T ss_pred hheecHHHHHHHHHHHhCCCCeEE-EECC----HHHHHHHHHc-----CCcccCCcCCEEEEeCCCCCCHH--HHHHHHH
Confidence 356666654321 000000010 0001 2233333321 22222211111221111000111 1112222
Q ss_pred HHhcC---CCCCCCeEEEEcCc----------------EEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 751 HLWSG---PISNASVDVVQGGR----------------SVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 751 ~L~~~---~~~~~~v~v~~G~~----------------~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
.+... +..+.......... ..|....+-.|+.+++.++++++ ++++.+++||| .
T Consensus 136 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~ 208 (264)
T 3epr_A 136 AIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILN------IPRNQAVMVGD-N 208 (264)
T ss_dssp HHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHT------SCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhC------cCcccEEEECC-C
Confidence 22011 01111111111100 12344556677788999999998 67899999999 9
Q ss_pred -CCCHHHHHhcCc
Q 002285 812 -QKDEDIYTFFEP 823 (942)
Q Consensus 812 -~nDEdMF~~~~~ 823 (942)
.||..|.+.++-
T Consensus 209 ~~~Di~~a~~aG~ 221 (264)
T 3epr_A 209 YLTDIMAGINNDI 221 (264)
T ss_dssp TTTHHHHHHHHTC
T ss_pred cHHHHHHHHHCCC
Confidence 799999999974
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.7e-08 Score=100.54 Aligned_cols=114 Identities=20% Similarity=0.183 Sum_probs=84.8
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecc
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENG 680 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG 680 (942)
..|+|+||+||||++....-. .. .+....++++..++|++|.+ .|..++|+|||+...+...+..+++.-.- +|
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~--~~--~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~-~~ 80 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYD--AN--GEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFF-LG 80 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEE--TT--EEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEE-ES
T ss_pred CCeEEEEeCCCCcCCCCeeec--cC--cceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHHcCCceee-cC
Confidence 358999999999998521100 00 00112467788999999987 59999999999998888877765432100 00
Q ss_pred eEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCC
Q 002285 681 MFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNA 760 (942)
Q Consensus 681 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~ 760 (942)
T Consensus 81 -------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 81 -------------------------------------------------------------------------------- 80 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 761 SVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 761 ~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+|+.+++.++++++ ++++.+++||| +.||.+|++.++.
T Consensus 81 ----------------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~ 120 (180)
T 1k1e_A 81 ----------------KLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGT 120 (180)
T ss_dssp ----------------CSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred ----------------CCCcHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCC
Confidence 0579999999999988 56789999999 9999999999975
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.64 E-value=7.5e-09 Score=107.65 Aligned_cols=46 Identities=13% Similarity=-0.044 Sum_probs=42.0
Q ss_pred EEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC-CCCHHHHHhcCc
Q 002285 771 VEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL-QKDEDIYTFFEP 823 (942)
Q Consensus 771 vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMF~~~~~ 823 (942)
.|+.+.+.+|+.+++.++++++ ++++.+++||| + .||.+|++.++.
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~nDi~~~~~aG~ 215 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKMQ------AHSEETVIVGD-NLRTDILAGFQAGL 215 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHHHHHTTC
T ss_pred CCceEeCCCCHHHHHHHHHHcC------CCcceEEEECC-CchhHHHHHHHcCC
Confidence 4677899999999999999998 67899999999 9 799999999985
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.4e-06 Score=98.87 Aligned_cols=239 Identities=10% Similarity=0.046 Sum_probs=138.9
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|+.-...++ .+..+..++|+++. +.+..+.+ + ++.+++.+.+. .+|++...+..+.++|.+
T Consensus 94 kPD~Vlv~gd~~~~~a-alaA~~~~IPv~h~-eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~~l~~---- 163 (385)
T 4hwg_A 94 KPDAVLFYGDTNSCLS-AIAAKRRKIPIFHM-EAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARRYLIA---- 163 (385)
T ss_dssp CCSEEEEESCSGGGGG-HHHHHHTTCCEEEE-SCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHHHHHH----
T ss_pred CCcEEEEECCchHHHH-HHHHHHhCCCEEEE-eCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHHHHHH----
Confidence 6799999975444445 44444557887644 33332211 1 22234444442 378887788877777654
Q ss_pred HhccccCCCceecCCeeeEEEEeeC-ccCccccchhcCChhhHHHHHHHHHHhc---CCceEEEeeccc---ccCCHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPI-GIDSDRFVRALELPQVQDHINELKERFA---GRKVMLGVDRLD---MIKGIPQK 392 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd---~~KGi~~l 392 (942)
.|. ...+|.++++ ++|.-.+... ......++++++ ++.+++..+|.. ..|++..+
T Consensus 164 -~G~-----------~~~~I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~l 225 (385)
T 4hwg_A 164 -EGL-----------PAELTFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKEL 225 (385)
T ss_dssp -TTC-----------CGGGEEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHHH
T ss_pred -cCC-----------CcCcEEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHH
Confidence 232 2345666664 5664332110 011223455553 344556677854 44789999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|+.++.+++ ++. +|... +|. +++.++++. +. .+ ....|+ +.+.++..++..+|+.||
T Consensus 226 l~al~~l~~~~-~~~----vv~p~------~p~---~~~~l~~~~---~~-~~--~~~~v~-l~~~lg~~~~~~l~~~ad 284 (385)
T 4hwg_A 226 LNSLQMLIKEY-NFL----IIFST------HPR---TKKRLEDLE---GF-KE--LGDKIR-FLPAFSFTDYVKLQMNAF 284 (385)
T ss_dssp HHHHHHHHHHH-CCE----EEEEE------CHH---HHHHHHTSG---GG-GG--TGGGEE-ECCCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHhcC-CeE----EEEEC------ChH---HHHHHHHHH---HH-hc--CCCCEE-EEcCCCHHHHHHHHHhCc
Confidence 99999998765 542 33221 132 233333220 10 00 112354 457788889999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC-ccccc-CCceEEECCCCHHHHHHHHHHHhCCC
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G-~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~ 539 (942)
+++..| |.+..||+++ +-|+|+....+ -.+.+ ..++++|.+ |.+++++++.++|+++
T Consensus 285 lvvt~S-----Ggv~~EA~al----G~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 285 CILSDS-----GTITEEASIL----NLPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEH 343 (385)
T ss_dssp EEEECC-----TTHHHHHHHT----TCCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTC
T ss_pred EEEECC-----ccHHHHHHHc----CCCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhCh
Confidence 999887 4467999999 24666554432 23334 125677754 8999999999999865
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.56 E-value=3.5e-10 Score=125.78 Aligned_cols=64 Identities=6% Similarity=-0.171 Sum_probs=47.1
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh---hhHH---Hhh--ccc
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR---NVLD---DNF--GEY 671 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~---~~L~---~~~--~~~ 671 (942)
...++|+||+||||++. +. .++|.++.. .+..++++|||+. ..+. .++ ..+
T Consensus 19 ~~~kli~fDlDGTLld~-------------~~-------~~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l 77 (332)
T 1y8a_A 19 FQGHMFFTDWEGPWILT-------------DF-------ALELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEAGYTL 77 (332)
T ss_dssp -CCCEEEECSBTTTBCC-------------CH-------HHHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCTTTHH
T ss_pred CCceEEEEECcCCCcCc-------------cH-------HHHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeechhhc
Confidence 34689999999999986 11 167777776 4778999999999 6665 555 444
Q ss_pred C--ceEEeecceEEE
Q 002285 672 N--MWLAAENGMFLR 684 (942)
Q Consensus 672 ~--l~liaehG~~ir 684 (942)
+ .++++.||+.+.
T Consensus 78 ~~~~~~i~~nGa~i~ 92 (332)
T 1y8a_A 78 KLLTPFLAAAGVKNR 92 (332)
T ss_dssp HHHHHHHHHTTCCHH
T ss_pred CCcCeEEEcCCcEEE
Confidence 2 357889999875
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-07 Score=95.80 Aligned_cols=39 Identities=18% Similarity=0.119 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+|+.+++.+++.++ ++++.+++||| +.||.+|++.++.
T Consensus 85 ~~k~~~l~~~~~~~~------~~~~~~~~vGD-~~nD~~~~~~ag~ 123 (176)
T 3mmz_A 85 DRKDLALKQWCEEQG------IAPERVLYVGN-DVNDLPCFALVGW 123 (176)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHHHHHCCC
Confidence 679999999999998 56889999999 9999999999853
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.53 E-value=6.3e-07 Score=108.24 Aligned_cols=150 Identities=13% Similarity=0.176 Sum_probs=107.7
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhHH--hCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFLE--ENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll~--~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++.|.||...||... ++..+.++++ .+|+.. ..+++|..|....++. ..+.+-+.+..++..||..-...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~-~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYV-RAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHH-HHHHHHHHHHHHHHHhccccccCC
Confidence 5678889999999999999 8999988875 566411 1266665554443332 234556667777777776433333
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CCCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSL--RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl--~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllVn 521 (942)
...|.|+. ..+.+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+-.++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 33577664 4566777788999999999999 89999999999986 777778887776554 5 5899997
Q ss_pred C--CCHHHHH
Q 002285 522 P--WNITEVA 529 (942)
Q Consensus 522 P--~D~~~lA 529 (942)
. .++.++-
T Consensus 668 ~~~~ev~~l~ 677 (796)
T 2c4m_A 668 ARVEELPALR 677 (796)
T ss_dssp CCTTTHHHHH
T ss_pred CchhhHHHHH
Confidence 6 5665543
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=9.1e-07 Score=106.89 Aligned_cols=150 Identities=15% Similarity=0.140 Sum_probs=108.1
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhHH--hCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFLE--ENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll~--~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++.|.|+...||... ++..+.++++ .+|+.. ..+++|..|....++. ..+.+-+.+..++..||..-...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~-~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHH-HHHHHHHHHHHHHHHhccccccCC
Confidence 5678889999999999999 8888888865 355411 1366665554443332 234555667777776776432233
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CCCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSL--RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl--~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllVn 521 (942)
...|.|+. ..+.+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+-.++ | .+|+++.
T Consensus 604 ~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 33577654 4666777789999999999999 89999999999986 777778888877655 5 5899998
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. +.+++.+
T Consensus 678 ~-~~~ev~~ 685 (796)
T 1l5w_A 678 H-TVEQVKA 685 (796)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 7 7777653
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.1e-06 Score=88.19 Aligned_cols=42 Identities=17% Similarity=0.037 Sum_probs=36.6
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
..+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 176 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~a~~aG~ 218 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDAD------CAPEEAVMIGD-DCRDDVDGAQNIGM 218 (259)
T ss_dssp ECSTTSHHHHHHHGGGGT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred EecCCCHHHHHHHHHHcC------CChHHEEEECC-CcHHHHHHHHHCCC
Confidence 345578999999999998 67899999999 98 99999999964
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=3.2e-07 Score=93.31 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=79.9
Q ss_pred cccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEe
Q 002285 598 LQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAA 677 (942)
Q Consensus 598 ~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~lia 677 (942)
+....++|+||+||||++....-...+. ...........+|++|.+ .|..++|+||++...++.++..+++.-.
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~~~~~~----~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~lgl~~~- 95 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYMGNNGE----ELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATLGITHL- 95 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEEETTSC----EEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHHTCCEE-
T ss_pred HHhcCCEEEEeCCCCcCCCCEEecCCCc----EEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHcCCcee-
Confidence 3456789999999999983210000000 001122233457888886 5899999999998877777665432210
Q ss_pred ecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCC
Q 002285 678 ENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPI 757 (942)
Q Consensus 678 ehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~ 757 (942)
+
T Consensus 96 ----------------~--------------------------------------------------------------- 96 (188)
T 2r8e_A 96 ----------------Y--------------------------------------------------------------- 96 (188)
T ss_dssp ----------------E---------------------------------------------------------------
T ss_pred ----------------e---------------------------------------------------------------
Confidence 0
Q ss_pred CCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 758 SNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 758 ~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+..|+.+++++++.++ ++++.+++||| +.||..|++.++-
T Consensus 97 -----------------~~~kpk~~~~~~~~~~~g------~~~~~~~~iGD-~~~Di~~a~~ag~ 138 (188)
T 2r8e_A 97 -----------------QGQSNKLIAFSDLLEKLA------IAPENVAYVGD-DLIDWPVMEKVGL 138 (188)
T ss_dssp -----------------CSCSCSHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHTTSSE
T ss_pred -----------------cCCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 003578999999999987 56789999999 9999999988753
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=2.6e-07 Score=101.06 Aligned_cols=185 Identities=15% Similarity=0.101 Sum_probs=102.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcccCc-----
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGEYNM----- 673 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l----- 673 (942)
.++|+||+||||++. ..+.+.+.++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 21 ~k~i~~D~DGTL~~~---------------~~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~ 84 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNG---------------ERAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFARLGFGGLRA 84 (306)
T ss_dssp CSEEEECSBTTTEET---------------TEECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCG
T ss_pred CCEEEECCCCcEecC---------------CccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHhcCCCcCCh
Confidence 579999999999974 1356789999999997 699999999 6888888877766543
Q ss_pred -eEEeecceEEEe-----C-----CCceeecccCCCChhHHHHHHHHHHHHHhc-CCC---eeeeeecceEEEEEeccch
Q 002285 674 -WLAAENGMFLRL-----T-----TGEWMTTMPENLNMDWVDSVKHVFEYFTER-TPR---SHFEVRETSLVWNYKYADL 738 (942)
Q Consensus 674 -~liaehG~~ir~-----~-----~~~w~~~~~~~~~~~w~~~v~~il~~~~~r-~~G---s~iE~K~~sl~~hyr~ad~ 738 (942)
.++..||+.+.. . ++. .... .. ..+...+...--. ... .+.........+.....
T Consensus 85 ~~i~~~~~~~~~~l~~~~~~~~~~~~~-v~~~---g~----~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~-- 154 (306)
T 2oyc_A 85 EQLFSSALCAARLLRQRLPGPPDAPGA-VFVL---GG----EGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDE-- 154 (306)
T ss_dssp GGEEEHHHHHHHHHHHHCCSCSSSCCE-EEEE---SC----HHHHHHHHHTTCEETTSCCCC---CCCEEEEEECCCT--
T ss_pred hhEEcHHHHHHHHHHhhCCccccCCCe-EEEE---CC----HHHHHHHHHCCCEeecccccccccCCCCCEEEEeCCC--
Confidence 255555543320 0 110 0000 00 1122222221000 000 00011112222222111
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCeEEEEcC-c------------------------EEEEEECCCCHHHHHHHHHHHhcc
Q 002285 739 EFGRLQARDILQHLWSGPISNASVDVVQGG-R------------------------SVEVRAVGVTKGAAIDRILGEIVR 793 (942)
Q Consensus 739 e~~~~qa~el~~~L~~~~~~~~~v~v~~G~-~------------------------~vEV~p~gvnKG~Av~~Ll~~l~~ 793 (942)
......+.+++..| ... .. +-++..+ . ..|....+..|+.+++.+++.++
T Consensus 155 ~~~~~~~~~~l~~l-~~~--g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg- 229 (306)
T 2oyc_A 155 HFSFAKLREACAHL-RDP--EC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFS- 229 (306)
T ss_dssp TCCHHHHHHHHHHH-TST--TS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSC-
T ss_pred CCCHHHHHHHHHHH-HcC--CC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcC-
Confidence 11111234455555 221 01 1111111 0 11234567788999999999998
Q ss_pred cCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 794 HKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 794 ~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
++++.+++||| .. ||..|.+.++-
T Consensus 230 -----i~~~e~l~vGD-~~~~Di~~a~~aG~ 254 (306)
T 2oyc_A 230 -----IDPARTLMVGD-RLETDILFGHRCGM 254 (306)
T ss_dssp -----CCGGGEEEEES-CTTTHHHHHHHHTC
T ss_pred -----CChHHEEEECC-CchHHHHHHHHCCC
Confidence 67899999999 95 99999999975
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-05 Score=97.74 Aligned_cols=151 Identities=11% Similarity=0.086 Sum_probs=106.8
Q ss_pred CCceEEEeecccccCCHHHH-HHHHHHhH--HhCCCCCC-cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQK-ILAFEKFL--EENPSWRD-KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~l-L~Af~~ll--~~~P~~~~-~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++.|.|+...||.... +..+.+++ ..+|+..- .+++|..|....++. ..+.+-+.+..++..+|..-...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~-~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYH-MAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHH-HHHHHHHHHHHHHHHhccCcccCC
Confidence 56788899999999999998 88888875 35664320 256665554443432 234566667778888865433333
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CCCCChhHHHHHhhccCCCceEEEeCCCCcccc----cC-CceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSL--RDGMNLVSYEFVACQASKKGVLILSEFAGAAQS----LG-AGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl--~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~----lg-~~gllVn 521 (942)
...|.|+. ..+.+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+..+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 33577664 4566677788999999999999 89999999999986 87777777776533 34 5799998
Q ss_pred CCCHHHHHHHH
Q 002285 522 PWNITEVASSI 532 (942)
Q Consensus 522 P~D~~~lA~aI 532 (942)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 76 6666 444
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1e-06 Score=86.83 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-.|..+++.++++++ ++++.+++||| +.||..|.+.++-
T Consensus 78 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~ 116 (164)
T 3e8m_A 78 VDKLSAAEELCNELG------INLEQVAYIGD-DLNDAKLLKRVGI 116 (164)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEECC-SGGGHHHHTTSSE
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 579999999999997 56899999999 9999999988854
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.39 E-value=1.8e-06 Score=88.10 Aligned_cols=39 Identities=18% Similarity=0.052 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-+|+.+++.+++.++ ++++.+++||| +.||.+|++.++-
T Consensus 93 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~ 131 (191)
T 3n1u_A 93 VDKRSAYQHLKKTLG------LNDDEFAYIGD-DLPDLPLIQQVGL 131 (191)
T ss_dssp SSCHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 478999999999987 56889999999 9999999999853
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.4e-07 Score=88.70 Aligned_cols=113 Identities=18% Similarity=0.064 Sum_probs=81.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecce
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGM 681 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~ 681 (942)
.++|+||+||||++...... ........+++.+.++|++|.+ .|..++|+||++...++..+..+++...
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~----- 78 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYT----EHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKELGVEEI----- 78 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEE----TTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHTTCCEE-----
T ss_pred eeEEEEecCcceECCceeec----CCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCHhh-----
Confidence 58999999999997521100 0000112356788999999987 5899999999998888877766543210
Q ss_pred EEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCC
Q 002285 682 FLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNAS 761 (942)
Q Consensus 682 ~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~ 761 (942)
+ .
T Consensus 79 ------------~-~----------------------------------------------------------------- 80 (162)
T 2p9j_A 79 ------------Y-T----------------------------------------------------------------- 80 (162)
T ss_dssp ------------E-E-----------------------------------------------------------------
T ss_pred ------------c-c-----------------------------------------------------------------
Confidence 0 0
Q ss_pred eEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 762 VDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 762 v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+..|..+++.+++.++ .+++.+++||| +.+|..|.+.++-
T Consensus 81 --------------~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~ag~ 121 (162)
T 2p9j_A 81 --------------GSYKKLEIYEKIKEKYS------LKDEEIGFIGD-DVVDIEVMKKVGF 121 (162)
T ss_dssp --------------CC--CHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred --------------CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 03467888899999887 56789999999 9999999999875
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-05 Score=90.62 Aligned_cols=158 Identities=11% Similarity=0.004 Sum_probs=101.0
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
++.+++++|++. .|+...+..+++.+.+ . ++ .++.++.+. +.. +++++ +. ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-~-~~----~~~~~~g~~----~~~----~~l~~----~~--------~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAG-L-DA----DVLVASGPS----LDV----SGLGE----VP--------ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHT-S-SS----EEEEECCSS----CCC----TTCCC----CC--------TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHc-C-CC----EEEEEECCC----CCh----hhhcc----CC--------CcE
Confidence 345678899996 6777766666666543 2 22 233333221 100 01110 10 125
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC--C
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 524 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~--D 524 (942)
.+ .++++ +..+|+.||+||.+|- ..+++|||+| +.|+|+....+ .++.+ +..|+++++. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~g----~~t~~Ea~a~----G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHGG----SGTTLGALGA----GVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESCC----HHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECCc----hHHHHHHHHh----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 45563 7789999999998762 3689999999 24677755443 44445 3579999987 9
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 525 ITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 525 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
.++++++|.++|+++ +.|+++.+..++....++....++.+.+.+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999864 455555566677777888777776655443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.8e-06 Score=83.86 Aligned_cols=53 Identities=21% Similarity=0.190 Sum_probs=40.2
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
|++|||+||||+.....- ... .....+.|.+.++|++|.+ .|..++|+|+++.
T Consensus 2 k~v~~D~DGtL~~~~~~~---~~~--~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSDAF---VKS--PDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CEEEECSBTTTBCCCTTC---CCS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CEEEEcCCCccccCCCcc---CCC--HHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 789999999999763210 000 0345678999999999987 5999999999873
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.30 E-value=8.4e-07 Score=86.36 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=51.2
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC---hhhHHHhhcccCc--eEE
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD---RNVLDDNFGEYNM--WLA 676 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~---~~~L~~~~~~~~l--~li 676 (942)
.++||+|+||||++.. .| ....+.+.++++|++|.+ .|+.|+|+|||+ +..+..++...++ .++
T Consensus 3 ~k~i~~DlDGTL~~~~-~~---------~i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp CCEEEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred CeEEEEECcCCCCCCC-Cc---------cccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEE
Confidence 5799999999999852 11 112345789999999987 699999999998 5667777777643 566
Q ss_pred eecc
Q 002285 677 AENG 680 (942)
Q Consensus 677 aehG 680 (942)
+.|+
T Consensus 72 ~~n~ 75 (142)
T 2obb_A 72 NKDY 75 (142)
T ss_dssp SSSS
T ss_pred EcCC
Confidence 6654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.3e-06 Score=88.30 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.+|+.++..++++++ ++++.+++||| +.||.+|++.++.
T Consensus 140 ~~~~K~~~l~~~~~~lg------i~~~~~~~iGD-~~~Di~~~~~ag~ 180 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGL 180 (211)
T ss_dssp STTHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHCSE
T ss_pred CCccHHHHHHHHHHHcC------CCHHHEEEEec-ChhHHHHHHHCCC
Confidence 46799999999999998 67899999999 9999999999864
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.29 E-value=4.4e-06 Score=83.75 Aligned_cols=38 Identities=21% Similarity=0.100 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+|+.+++.++++++ ++++.+++||| +.||.+|++.++.
T Consensus 83 ~K~~~l~~~~~~~g------i~~~~~~~vGD-~~nDi~~~~~ag~ 120 (168)
T 3ewi_A 83 DKLATVDEWRKEMG------LCWKEVAYLGN-EVSDEECLKRVGL 120 (168)
T ss_dssp CHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHHHSSE
T ss_pred ChHHHHHHHHHHcC------cChHHEEEEeC-CHhHHHHHHHCCC
Confidence 69999999999988 57899999999 9999999999864
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=5.2e-06 Score=93.23 Aligned_cols=155 Identities=10% Similarity=0.033 Sum_probs=98.6
Q ss_pred CceEEEeecccccCCH-HHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 374 RKVMLGVDRLDMIKGI-PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi-~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
+.++++.|++...|+. ..+++++.+. ++.|+++ ++.++ +++....+ . .+. ..|
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~-----~~~~~~~l----~----~~~--------~~v 272 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAV-----PPEHRALL----T----DLP--------DNA 272 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEEC-----CGGGGGGC----T----TCC--------TTE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEE-----CCcchhhc----c----cCC--------CCE
Confidence 4567788999886655 8888888888 7777754 44332 22221111 1 110 124
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCC----CCccccc--CCceEEECC----
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEF----AGAAQSL--GAGAILVNP---- 522 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~----~G~~~~l--g~~gllVnP---- 522 (942)
+ +.++++..+ ++..||++|.. |-..+.+|||+| +-|+|+.-. .+.++.+ +..|+++++
T Consensus 273 ~-~~~~~~~~~---ll~~ad~~v~~----~G~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 340 (391)
T 3tsa_A 273 R-IAESVPLNL---FLRTCELVICA----GGSGTAFTATRL----GIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQ 340 (391)
T ss_dssp E-ECCSCCGGG---TGGGCSEEEEC----CCHHHHHHHHHT----TCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHH
T ss_pred E-EeccCCHHH---HHhhCCEEEeC----CCHHHHHHHHHh----CCCEEecCCcccHHHHHHHHHHcCCEEecCccccc
Confidence 4 356677654 55999999954 445688999999 245666433 2333334 457999999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHH
Q 002285 523 WNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFV 567 (942)
Q Consensus 523 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 567 (942)
.|.++++++|.++|+++. .|+++.+...+..........++.+.
T Consensus 341 ~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (391)
T 3tsa_A 341 SDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTLE 384 (391)
T ss_dssp TCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999998763 44444444555556666666555443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.26 E-value=2.8e-06 Score=86.40 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+|+.+++.+++.++ ++++.+++||| +.||.+|++.++-
T Consensus 93 ~~K~~~~~~~~~~~g------~~~~~~~~vGD-~~nDi~~~~~ag~ 131 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQ------LGYEQVAYLGD-DLPDLPVIRRVGL 131 (189)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CChHHHHHHHHHHcC------CChhHEEEECC-CHHHHHHHHHCCC
Confidence 589999999999988 56899999999 9999999999853
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.7e-06 Score=90.71 Aligned_cols=65 Identities=9% Similarity=0.113 Sum_probs=48.6
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc---cCc-----e
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE---YNM-----W 674 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~---~~l-----~ 674 (942)
|+|+||+||||++. ...+ +.+.++|++|.+ .|..|+++|||+......++.. +++ .
T Consensus 2 k~i~~D~DGtL~~~--------------~~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~ 65 (263)
T 1zjj_A 2 VAIIFDMDGVLYRG--------------NRAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI 65 (263)
T ss_dssp EEEEEECBTTTEET--------------TEEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred eEEEEeCcCceEeC--------------CEeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 68999999999974 1223 689999999987 5999999999997655544433 333 4
Q ss_pred EEeecceEE
Q 002285 675 LAAENGMFL 683 (942)
Q Consensus 675 liaehG~~i 683 (942)
++++||+..
T Consensus 66 i~~~~~~~~ 74 (263)
T 1zjj_A 66 IITSGLATR 74 (263)
T ss_dssp EEEHHHHHH
T ss_pred EEecHHHHH
Confidence 777777654
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-05 Score=90.03 Aligned_cols=100 Identities=11% Similarity=0.003 Sum_probs=63.6
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCC----CCccccc--CCceEEECCC--
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEF----AGAAQSL--GAGAILVNPW-- 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~----~G~~~~l--g~~gllVnP~-- 523 (942)
|++ .++++ +..++..||++|. .|-+.+++|||+| +-|+|+... .+.++.+ ...|+++++.
T Consensus 286 v~~-~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VLA-AGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSE----GVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EEE-ESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHT----TCCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EEE-eCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHh----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 443 45665 4567888999995 4446789999999 246777433 3444444 4578999887
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHH
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAA 564 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 564 (942)
|.++++++|.++|+++. .|+.+.+...++....+....++
T Consensus 354 ~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 354 GVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp ---CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 78899999999998753 44444444555555666555444
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.2e-05 Score=82.91 Aligned_cols=40 Identities=15% Similarity=-0.055 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCc-eEEEEeCCCCCCHHHHHhcC
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPID-YVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d-~vl~iGD~d~nDEdMF~~~~ 822 (942)
.+-.|+.+++.++++++ ++++ .+++||| +.||..|.+.++
T Consensus 157 ~~Kp~~~~~~~~~~~lg------i~~~~~~v~vGD-~~~Di~~a~~aG 197 (231)
T 3kzx_A 157 TIKPSPEPVLAALTNIN------IEPSKEVFFIGD-SISDIQSAIEAG 197 (231)
T ss_dssp CCTTSSHHHHHHHHHHT------CCCSTTEEEEES-SHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHcC------CCcccCEEEEcC-CHHHHHHHHHCC
Confidence 35567889999999998 5677 8999999 999999999985
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.16 E-value=7.7e-06 Score=82.80 Aligned_cols=46 Identities=15% Similarity=0.047 Sum_probs=38.6
Q ss_pred CcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHh
Q 002285 768 GRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTF 820 (942)
Q Consensus 768 ~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~ 820 (942)
....++.+.+.+|+.+++.+.+.++ ++++.+++||| +.||.+|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~vGD-~~~Di~~~~~ 182 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKG------LIDGEVIAIGD-GYTDYQLYEK 182 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGG------GCCSEEEEEES-SHHHHHHHHH
T ss_pred CceeccCCCCCCcccHHHHHHHHhC------CCCCCEEEEEC-CHhHHHHHhC
Confidence 3445677888999999999998887 56789999999 9999999853
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.14 E-value=8.6e-06 Score=83.57 Aligned_cols=39 Identities=15% Similarity=-0.044 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-+|+.+++.+++.++ ++++.+++||| +.||.+|++.++.
T Consensus 99 k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~nDi~~~~~ag~ 137 (195)
T 3n07_A 99 DDKVQAYYDICQKLA------IAPEQTGYIGD-DLIDWPVMEKVAL 137 (195)
T ss_dssp SSHHHHHHHHHHHHC------CCGGGEEEEES-SGGGHHHHTTSSE
T ss_pred CCcHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHCCC
Confidence 379999999999998 56899999999 9999999999975
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.13 E-value=4.6e-05 Score=86.76 Aligned_cols=103 Identities=12% Similarity=-0.066 Sum_probs=69.8
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC--
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~-- 523 (942)
|.+ .+++++. .+|+.||+||..+ |+ .+++|||+| +-|+|++...| .++.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~----G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 352 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLAT----ATPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-C
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHh----CCCEEECCCccchHHHHHHHHHcCCEEEcCCCCC
Confidence 544 4667755 6899999999865 33 689999999 34677776654 23333 3578999887
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHH
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFV 567 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 567 (942)
|.++++++|.++|++ ++.+++..+...+....++....++.+.
T Consensus 353 ~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 353 TADLLRETALALVDD-PEVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp CHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 889999999999985 3444444444455555555555555443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.12 E-value=7.4e-06 Score=85.13 Aligned_cols=39 Identities=18% Similarity=0.081 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-+|+.+++.+++.++ ++++.+++||| +.||.+|++.++-
T Consensus 123 k~K~~~l~~~~~~lg------~~~~~~~~vGD-s~nDi~~~~~ag~ 161 (211)
T 3ij5_A 123 SDKLVAYHELLATLQ------CQPEQVAYIGD-DLIDWPVMAQVGL 161 (211)
T ss_dssp SSHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHTTSSE
T ss_pred CChHHHHHHHHHHcC------cCcceEEEEcC-CHHHHHHHHHCCC
Confidence 468999999999988 57899999999 9999999988753
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.02 E-value=6.3e-06 Score=84.43 Aligned_cols=43 Identities=16% Similarity=-0.042 Sum_probs=38.4
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.+..|+.+++.++++++ ++++.+++||| ..||..|++.++-
T Consensus 138 ~~~~kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLN------IKSDDAIMIGD-REYDVIGALKNNL 180 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHTTTC
T ss_pred CCCCCCCHHHHHHHHHHhC------cCcccEEEECC-CHHHHHHHHHCCC
Confidence 3567899999999999998 56789999999 9999999999864
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-05 Score=80.21 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=47.7
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCcc-----------ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC-hhhHHHhh
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQI-----------REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD-RNVLDDNF 668 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~-----------~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~-~~~L~~~~ 668 (942)
..++|+||+||||.+..-.. ..+... ......+.|.+.++|++|.+ .|..++|+||++ ...++.++
T Consensus 26 ~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~~~~~~~~~~l 103 (187)
T 2wm8_A 26 LPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRTSEIEGANQLL 103 (187)
T ss_dssp SCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECCSCHHHHHHHH
T ss_pred ccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCCCChHHHHHHH
Confidence 35799999999998532100 000000 01234678999999999987 589999999998 67777766
Q ss_pred cccC
Q 002285 669 GEYN 672 (942)
Q Consensus 669 ~~~~ 672 (942)
..++
T Consensus 104 ~~~g 107 (187)
T 2wm8_A 104 ELFD 107 (187)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 6543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=7.7e-06 Score=84.50 Aligned_cols=55 Identities=9% Similarity=0.113 Sum_probs=41.6
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChh
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRN 662 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~ 662 (942)
+.++++||+||||+...... .. .....+.|.+.++|++|.+ .|..++|+|+++..
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~----~~--~~~~~~~pg~~e~L~~L~~-~G~~~~ivTn~~~~ 78 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSGI 78 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTHH
T ss_pred cCCEEEEcCCCCeECCCCcc----cC--cccCcCCcCHHHHHHHHHH-CCCeEEEEECcCCc
Confidence 35789999999999753111 00 0234678899999999997 59999999999864
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=97.98 E-value=7.2e-06 Score=84.80 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=38.2
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.+..|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLG------IPPERCVVIGD-GVPDAEMGRAAGM 198 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCC
Confidence 3557789999999999998 67899999999 9999999999964
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.97 E-value=3.3e-06 Score=86.93 Aligned_cols=40 Identities=10% Similarity=-0.088 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 154 ~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~aG~ 194 (234)
T 3u26_A 154 FKPHPRIFELALKKAG------VKGEEAVYVGD-NPVKDCGGSKNLGM 194 (234)
T ss_dssp CTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHTTTC
T ss_pred CCcCHHHHHHHHHHcC------CCchhEEEEcC-CcHHHHHHHHHcCC
Confidence 4456888999999998 67899999999 97 99999999864
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.95 E-value=4.3e-05 Score=90.68 Aligned_cols=172 Identities=8% Similarity=-0.029 Sum_probs=105.7
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
..++.+..|+ .|..+..++++.+++++.|+.+ +.+..++ . +.+... .+.+++.+. .|.. .|.
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~--L~l~~~g-~--~~g~~~-~~~~~~~~~--GI~~--------Rv~ 502 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV--HFHFALG-Q--SNGITH-PYVERFIKS--YLGD--------SAT 502 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE--EEEEEES-S--CCGGGH-HHHHHHHHH--HHGG--------GEE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE--EEEEecC-C--CchhhH-HHHHHHHHc--CCCc--------cEE
Confidence 4556677875 6899999999999999999742 2222232 1 223322 222333222 2221 255
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeC-CCCccccc--------CCceEEECCCC
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSE-FAGAAQSL--------GAGAILVNPWN 524 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe-~~G~~~~l--------g~~gllVnP~D 524 (942)
| .+.++..+..++|+.|||||.|+.+.| |++++|||+| |++|++- ..+.+.-+ |-..++| ..|
T Consensus 503 F-~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm-----GVPVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 503 A-HPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL-----GLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp E-ECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT-----TCCEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred E-cCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc-----CCCEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 4 577899999999999999999998877 9999999999 7655553 22222111 3333223 237
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH---hcCHHHHHHHHHHHHHHhH
Q 002285 525 ITEVASSIGYALNMPADEREKRHLHNFMHVT---THTSQEWAATFVSELNDTI 574 (942)
Q Consensus 525 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~---~~~~~~W~~~fl~~L~~~~ 574 (942)
.++.++...++.+++ +.+.+..+++++... -++ .|.+.|-+.+..++
T Consensus 575 ~eeYv~~Av~La~D~-~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 575 VDEYVERAVRLAENH-QERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCH-HHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 889998888888764 345444444444321 122 45555555555443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.95 E-value=9.2e-06 Score=77.28 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=40.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV 663 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~ 663 (942)
|+|++|+||||++....+ . ....+++.+.++|++|.+ .|..++|+|||+...
T Consensus 2 k~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 689999999999863210 0 012577899999999987 699999999998743
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.94 E-value=4.7e-06 Score=86.38 Aligned_cols=55 Identities=18% Similarity=0.222 Sum_probs=41.6
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChh
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRN 662 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~ 662 (942)
..+++++|+||||+...... .. .....+.|.+.++|++|.+ .|..++|+|+++..
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~----~~--~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~~ 84 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP----SD--PAEIVLRPQMLPAIATANR-AGIPVVVVTNQSGI 84 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT----TC--GGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHHH
T ss_pred cCCEEEEeCCCCcCCCCccc----CC--cccCeECcCHHHHHHHHHH-CCCEEEEEcCcCCC
Confidence 35789999999999752111 00 0235678999999999987 59999999999764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.92 E-value=8e-07 Score=91.50 Aligned_cols=41 Identities=12% Similarity=0.003 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
.+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 153 ~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~aG~ 194 (230)
T 3vay_A 153 IGKPDPAPFLEALRRAK------VDASAAVHVGD-HPSDDIAGAQQAGM 194 (230)
T ss_dssp CCTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCcCHHHHHHHHHHhC------CCchheEEEeC-ChHHHHHHHHHCCC
Confidence 34567899999999998 67899999999 97 99999999864
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.7e-05 Score=81.50 Aligned_cols=54 Identities=9% Similarity=0.145 Sum_probs=42.6
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
..++|+||+||||++. ...+ +.+.++|+.|.+ .|..++++|||+......++..
T Consensus 4 ~~k~v~fDlDGTL~~~--------------~~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~~ 57 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLG--------------KEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQR 57 (264)
T ss_dssp SCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHH
T ss_pred cCCEEEEeCCCeEEeC--------------CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHH
Confidence 3579999999999985 2223 688899999987 5999999999988776655443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.1e-05 Score=84.78 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
.++.+++.++++++ ++++.+++||| .. ||..|.+.++-
T Consensus 163 p~~~~~~~~~~~l~------~~~~~~i~iGD-~~~~Di~~a~~aG~ 201 (251)
T 2pke_A 163 KDPQTYARVLSEFD------LPAERFVMIGN-SLRSDVEPVLAIGG 201 (251)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHHHHHTTC
T ss_pred CCHHHHHHHHHHhC------cCchhEEEECC-CchhhHHHHHHCCC
Confidence 46899999999998 57899999999 98 99999999975
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00093 Score=74.85 Aligned_cols=147 Identities=14% Similarity=0.047 Sum_probs=85.2
Q ss_pred ceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEE
Q 002285 375 KVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHH 454 (942)
Q Consensus 375 ~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~ 454 (942)
.+++..|++...+.-..+++|++.+.... ++.++.+++ .. .++.+.+.+ ...+.. +.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~-----~~~vi~~~G----~~-~~~~~~~~~----~~~~~~--------~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEI-----RPAIRHQAG----RQ-HAEITAERY----RTVAVE--------ADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTT-----CCEEEEECC----TT-THHHHHHHH----HHTTCC--------CEE
T ss_pred EEEEECCcCCccccchhhHHHHHhccccc-----ceEEEEecC----cc-cccccccee----cccccc--------ccc
Confidence 34555678877766667777777664321 133443332 21 223333332 232221 222
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc--------ccc--CCceEEECCC-
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA--------QSL--GAGAILVNPW- 523 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~--------~~l--g~~gllVnP~- 523 (942)
.+++ +++..+|+.||++|.-+ | +.++.|++++ +-|.|+..+.+.. +.+ ...|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~----G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAA----GLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHH----TCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHh----CCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 2333 57899999999999654 5 6788999999 2467776655432 223 2357888755
Q ss_pred -CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 524 -NITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 524 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
+.+.++++|.++|++++ .++++.+++++...
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~ 340 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLAK 340 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCC
Confidence 58899999999998763 45555555555433
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.80 E-value=6.4e-07 Score=91.29 Aligned_cols=42 Identities=12% Similarity=-0.001 Sum_probs=36.5
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+..|+.+++.++++++ ++++.+++||| ..||.+|++.++.
T Consensus 142 ~~~k~~~~~~~~~~~~~~------~~~~~~i~iGD-~~nDi~~~~~aG~ 183 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLK------ACPEEVLYIGD-STVDAGTAAAAGV 183 (225)
T ss_dssp SSCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHHHhC------CChHHeEEEcC-CHHHHHHHHHCCC
Confidence 345577899999999998 57899999999 9999999999975
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.79 E-value=4.5e-05 Score=77.56 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=37.8
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.+..|+.+++.+++.++ ++++.+++||| ..||.+|++.++.
T Consensus 138 ~~~k~k~~~~~~~~~~~g------~~~~~~i~vGD-s~~Di~~a~~aG~ 179 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLN------ISKTNTLVVGD-GANDLSMFKHAHI 179 (217)
T ss_dssp CSTTHHHHHHHHHHHHHT------CCSTTEEEEEC-SGGGHHHHTTCSE
T ss_pred CCCCChHHHHHHHHHHcC------CCHhHEEEEeC-CHHHHHHHHHCCC
Confidence 357899999999999998 56889999999 9999999999975
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=2.7e-06 Score=87.63 Aligned_cols=179 Identities=12% Similarity=0.068 Sum_probs=87.0
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHh-hhCCCCeEEEEcCCChhh-HHHhhcccCce-----
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRL-CDDPMTTVVVLSGSDRNV-LDDNFGEYNMW----- 674 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L-~~d~g~~V~IvSGR~~~~-L~~~~~~~~l~----- 674 (942)
.++|+||+||||++. .....+...++++++ -......+...+||+... +..++..+++.
T Consensus 4 ~k~iifDlDGTL~d~--------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 69 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKV--------------ESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIA 69 (234)
T ss_dssp CEEEEECCBTTTEEE--------------CTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHH
T ss_pred ceEEEEcCCCCcccC--------------ccchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccch
Confidence 579999999999986 223456677778774 322223566889999877 66666554321
Q ss_pred --EEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHH
Q 002285 675 --LAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHL 752 (942)
Q Consensus 675 --liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L 752 (942)
+...++.+...-...+.. ......+.+.++++...++ +|. .+.+- .+...+. ....++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~-~g~-------~~~i~-t~~~~~~----~~~~l~~~ 131 (234)
T 2hcf_A 70 DKFDKAKETYIALFRERARR-----EDITLLEGVRELLDALSSR-SDV-------LLGLL-TGNFEAS----GRHKLKLP 131 (234)
T ss_dssp HHHHHHHHHHHHHHHHHCCG-----GGEEECTTHHHHHHHHHTC-TTE-------EEEEE-CSSCHHH----HHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHhcc-----CCCCcCCCHHHHHHHHHhC-CCc-------eEEEE-cCCcHHH----HHHHHHHC
Confidence 222233222100000000 0000112344455544332 121 11111 1122211 12222222
Q ss_pred hcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 753 WSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 753 ~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+...... ++.+.. +.+++-.+..+++.++++++. .++++.+++||| +.||..|.+.++-
T Consensus 132 --~l~~~f~~-~~~~~~---~~~~~k~~~~~~~~~~~~lg~----~~~~~~~i~iGD-~~~Di~~a~~aG~ 191 (234)
T 2hcf_A 132 --GIDHYFPF-GAFADD---ALDRNELPHIALERARRMTGA----NYSPSQIVIIGD-TEHDIRCARELDA 191 (234)
T ss_dssp --TCSTTCSC-EECTTT---CSSGGGHHHHHHHHHHHHHCC----CCCGGGEEEEES-SHHHHHHHHTTTC
T ss_pred --CchhhcCc-ceecCC---CcCccchHHHHHHHHHHHhCC----CCCcccEEEECC-CHHHHHHHHHCCC
Confidence 11111111 232322 112222346778889998871 025789999999 9999999999864
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.74 E-value=2.8e-05 Score=79.30 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 158 pk~~~~~~~~~~lg------i~~~~~i~iGD-~~~~Di~~a~~aG~ 196 (234)
T 3ddh_A 158 KTEKEYLRLLSILQ------IAPSELLMVGN-SFKSDIQPVLSLGG 196 (234)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHHHHHHTC
T ss_pred CCHHHHHHHHHHhC------CCcceEEEECC-CcHHHhHHHHHCCC
Confidence 69999999999998 67899999999 96 99999999975
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=9.4e-05 Score=76.78 Aligned_cols=38 Identities=8% Similarity=-0.178 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|..+++.++++++ ++++.+++||| ..+|..|.+.++-
T Consensus 162 p~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 199 (240)
T 2no4_A 162 PDPRIYQFACDRLG------VNPNEVCFVSS-NAWDLGGAGKFGF 199 (240)
T ss_dssp TSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHHHHHCCC
Confidence 46778889999988 56899999999 9999999999864
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00057 Score=68.88 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=45.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCcc-ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh---hhHHHhhccc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQI-REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR---NVLDDNFGEY 671 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~-~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~---~~L~~~~~~~ 671 (942)
.++|+||+||||+....+- ...... .-....+.|.+.++|++|.+ .|.+++|+|+.+. ..+...+..+
T Consensus 3 ik~vifD~DgtL~~~~~~~-y~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~l~~~ 74 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTR-YDHHPLDTYPEVVLRKNAKETLEKVKQ-LGFKQAILSNTATSDTEVIKRVLTNF 74 (189)
T ss_dssp CCEEEECTBTTTBCCCTTS-SCSSCGGGCTTCCBCTTHHHHHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCceeeccchh-hhhHHHhccCCceeCcCHHHHHHHHHH-CCCEEEEEECCCccchHHHHHHHHhc
Confidence 5789999999998732100 000000 00235688999999999998 5899999999875 5555555443
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00042 Score=73.34 Aligned_cols=32 Identities=9% Similarity=0.123 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+|+.+++.+.+.+ .+++||| +.||.+|++.++
T Consensus 194 ~k~~~~k~~~~~~-----------~~~~vGD-~~nDi~~~~~Ag 225 (280)
T 3skx_A 194 EKAEKVKEVQQKY-----------VTAMVGD-GVNDAPALAQAD 225 (280)
T ss_dssp GHHHHHHHHHTTS-----------CEEEEEC-TTTTHHHHHHSS
T ss_pred HHHHHHHHHHhcC-----------CEEEEeC-CchhHHHHHhCC
Confidence 5888888776542 4699999 999999999885
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=5e-06 Score=89.08 Aligned_cols=42 Identities=12% Similarity=-0.013 Sum_probs=36.9
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCC-ceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPI-DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|+.+++.++++++ +++ +.+++||| +.||..|.+.++-
T Consensus 201 ~~~Kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~a~~aG~ 243 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKESG------LARYENAYFIDD-SGKNIETGIKLGM 243 (282)
T ss_dssp CCCTTSHHHHHHHHHHHT------CCCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred cCCCcCHHHHHHHHHHcC------CCCcccEEEEcC-CHHHHHHHHHCCC
Confidence 345679999999999998 566 99999999 9999999999975
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00097 Score=68.59 Aligned_cols=41 Identities=7% Similarity=-0.043 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|..+++.+++.++.. ..+++.+++||| +.+|.+|++.++.
T Consensus 159 ~K~~~~~~~~~~~~~~---~~~~~~~~~vGD-s~~D~~~~~~ag~ 199 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLA---LGDFAESYFYSD-SVNDVPLLEAVTR 199 (232)
T ss_dssp HHHHHHHHHHHHTTCC---GGGSSEEEEEEC-CGGGHHHHHHSSE
T ss_pred HHHHHHHHHHHHcCCC---cCchhheEEEeC-CHhhHHHHHhCCC
Confidence 4666777777776500 024688999999 9999999999975
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00038 Score=68.75 Aligned_cols=124 Identities=12% Similarity=0.090 Sum_probs=81.0
Q ss_pred CCceEEEeeccc---ccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCc
Q 002285 373 GRKVMLGVDRLD---MIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449 (942)
Q Consensus 373 ~~~iIl~VgRLd---~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~ 449 (942)
...+++++|++. +.|++..+++|++++ + + .++.++.+. . ++ .+.
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~--~-~~-------------~~~-------- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGN--K-PD-------------TLG-------- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSS--C-CT-------------TCC--------
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCc--C-cc-------------cCC--------
Confidence 356788999995 678888888888543 2 2 233333211 0 00 111
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC
Q 002285 450 VPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW 523 (942)
Q Consensus 450 ~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~ 523 (942)
..|+ +.+++++.++.++ ..||++|.. |-+.+++|+|+| +-|+|+....+ .++.+ ...|+++++.
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~----G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYH----GIPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHc----CCCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 1244 3577888766553 999999974 335899999999 34677776542 23333 3568889877
Q ss_pred --CHHHHHHHHHHHhCCC
Q 002285 524 --NITEVASSIGYALNMP 539 (942)
Q Consensus 524 --D~~~lA~aI~~aL~m~ 539 (942)
+.++++++|.++|+++
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999754
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.002 Score=71.84 Aligned_cols=137 Identities=10% Similarity=0.022 Sum_probs=84.4
Q ss_pred CceEEEeeccccc-------CCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCC
Q 002285 374 RKVMLGVDRLDMI-------KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGT 446 (942)
Q Consensus 374 ~~iIl~VgRLd~~-------KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~ 446 (942)
..+++++|++... +.+..+++|++++ +++ ++.++ +++.. +++.. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~-----g~~~~----~~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAA-----PDTVA----EALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEEC-----CHHHH----HHHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEe-----CCCCH----HhhCC----CCC----
Confidence 4578899999875 6777888887653 332 33222 22222 22221 111
Q ss_pred cCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEE
Q 002285 447 LTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILV 520 (942)
Q Consensus 447 ~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllV 520 (942)
.|. + ++++.. .+|..||+||..+ | ..+++|||+| +-|+|+....+ .++.+ ...|+++
T Consensus 265 ----~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~----G~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 265 ----QAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSA----GVPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ----TSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ----ceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHh----CCCEEEccCcccchHHHHHHHHCCCeEec
Confidence 133 4 667654 5679999999863 3 4589999999 24677776533 33333 2468888
Q ss_pred CCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 521 NPW--NITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 521 nP~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
++. +.++++++|.++|+++ + .++++.+..+.+.
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~-~-~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD-T-YARRAQDLSREIS 362 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH-H-HHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH-H-HHHHHHHHHHHHH
Confidence 875 7899999999999854 3 3344444434433
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00027 Score=72.63 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-.|..+++.++++++ ++++.+++||| ..+|..|.+.++-
T Consensus 150 ~Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 189 (232)
T 1zrn_A 150 YKPDNRVYELAEQALG------LDRSAILFVAS-NAWDATGARYFGF 189 (232)
T ss_dssp CTTSHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHHHHHcCC
Confidence 4567789999999998 56899999999 9999999999865
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0018 Score=72.35 Aligned_cols=106 Identities=14% Similarity=0.081 Sum_probs=66.6
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCC-C----Cccccc--CCceEEECCC-
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEF-A----GAAQSL--GAGAILVNPW- 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~-~----G~~~~l--g~~gllVnP~- 523 (942)
|+ +.++++.. .++..||++|..+- . .+.+|++++ +.|+|+.-. . +.++.+ ...|+.+++.
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~G---~-~t~~Ea~~~----G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHGT---T-GAVLEAFAA----GVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECCC---H-HHHHHHHHT----TCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred EE-EecCCCHH---HHHhhCCEEEECCC---H-HHHHHHHHh----CCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 44 34667665 88999999997762 2 577999999 245664433 2 333333 3568888876
Q ss_pred -CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 524 -NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 524 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
+.++++++|.++|+++ +.|++..+...+..........++.+.+.+
T Consensus 351 ~~~~~l~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 LEPASIREAVERLAADS-AVRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp CSHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 8999999999999864 333333333333334445555555444433
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00018 Score=77.10 Aligned_cols=73 Identities=12% Similarity=0.088 Sum_probs=47.5
Q ss_pred cCCEEEEEecCCccCCCCCccC-------CCCCc----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC---hhhHH
Q 002285 600 SNNRLLILGFNATLTAPVDFLG-------RRGGQ----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD---RNVLD 665 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~-------~~~~~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~---~~~L~ 665 (942)
.+.++|+||+||||++..+.-. ..... .......+.|.+.++|+.|.+ .|..++|+|||+ ...+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHHH
Confidence 4568999999999998620000 00000 000114578899999999997 699999999999 44555
Q ss_pred HhhcccCc
Q 002285 666 DNFGEYNM 673 (942)
Q Consensus 666 ~~~~~~~l 673 (942)
..+..+++
T Consensus 136 ~~L~~~Gl 143 (258)
T 2i33_A 136 KNLERVGA 143 (258)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 55554443
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=97.03 E-value=0.002 Score=69.50 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=52.3
Q ss_pred hhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 592 GAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 592 ~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
...+.|.....+++++|+|+++..... ....+.|.+.++|+.|.+ .|..++|+||++...++..+..+
T Consensus 133 ~~~~~~~~~g~~~i~~~~d~~~~~~~~-----------~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~ 200 (287)
T 3a1c_A 133 LALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISREL 200 (287)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEE-----------eccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHh
Confidence 344555555678999999999875321 123577899999999987 58999999999998887777654
Q ss_pred C
Q 002285 672 N 672 (942)
Q Consensus 672 ~ 672 (942)
+
T Consensus 201 g 201 (287)
T 3a1c_A 201 N 201 (287)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0018 Score=71.35 Aligned_cols=38 Identities=8% Similarity=0.135 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|..+++.+++.++ ++++.+++||| +.+|..|.+.++-
T Consensus 246 pkp~~~~~~~~~lg------v~~~~~i~VGD-s~~Di~aa~~AG~ 283 (317)
T 4eze_A 246 NKKQTLVDLAARLN------IATENIIACGD-GANDLPMLEHAGT 283 (317)
T ss_dssp HHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CCHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHHHHHCCC
Confidence 57788888899987 56789999999 9999999999975
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.032 Score=62.61 Aligned_cols=106 Identities=10% Similarity=0.002 Sum_probs=66.1
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC----Cccccc--CCceEEECCC--
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA----GAAQSL--GAGAILVNPW-- 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~----G~~~~l--g~~gllVnP~-- 523 (942)
|.+ .++++.. .++..||++|..+ |+ .+++|++++ +-|+|+--.. ..+..+ ...|+.+++.
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYW----GRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHT----TCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHh----CCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 443 4667655 7889999999775 33 578999999 2456663332 223333 2467888776
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
+.++++++|.++|+++ +.|+...+..............++.+.+.+
T Consensus 367 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADP-ALLARVEAMRGHVRRAGGAARAADAVEAYL 412 (415)
T ss_dssp CHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8999999999999864 333333333334444455555555444433
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.86 E-value=5e-05 Score=81.22 Aligned_cols=42 Identities=5% Similarity=-0.194 Sum_probs=37.3
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCC-------CCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKT-------PIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~-------~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.+..|+.+++.++++++ + +++.+++||| ..||.+|++.++.
T Consensus 167 ~~~kp~~~~~~~~~~~lg------i~~~~~~~~~~~~i~~GD-s~nDi~~a~~AG~ 215 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLG------FPINEQDPSKSKVVVFED-APAGIAAGKAAGC 215 (275)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCCCSSCGGGSCEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHcC------CCccccCCCcceEEEEeC-CHHHHHHHHHcCC
Confidence 456688999999999998 5 6789999999 9999999999974
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00045 Score=64.79 Aligned_cols=53 Identities=17% Similarity=0.147 Sum_probs=42.9
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
|+|++|+||||... ..+.|.+.++|++|.+ .|..++|+|+++...++..+..+
T Consensus 3 k~i~~D~DgtL~~~---------------~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 3 RGLIVDYAGVLDGT---------------DEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp CEEEECSTTTTSSC---------------HHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHHHH
T ss_pred cEEEEeccceecCC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHC
Confidence 68999999999432 3467889999999997 58999999999888776665543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0016 Score=66.33 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=44.8
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
..++||||+||||++...... ...........+-|.+.++|+.|.+ .|..++|+||.+...+.+..
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~-~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRD-QGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHH-HTCCEEEECCSCHHHHHHHH
T ss_pred cCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHH-CCCEEEEEcCChHHHHHHhc
Confidence 457899999999998421100 0000000123567899999999987 58999999999888774443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0019 Score=73.68 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|..+++.+++.++ ++++.+++||| +.||..|.+.++-
T Consensus 323 pk~~~~~~~~~~~g------i~~~~~i~vGD-~~~Di~~a~~aG~ 360 (415)
T 3p96_A 323 GKATALREFAQRAG------VPMAQTVAVGD-GANDIDMLAAAGL 360 (415)
T ss_dssp HHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHcC------cChhhEEEEEC-CHHHHHHHHHCCC
Confidence 58888999999988 57899999999 9999999999975
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0067 Score=73.19 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=53.0
Q ss_pred hhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 592 GAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 592 ~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
...+.+.....+.+++.+||+++.... ..-.+.+++.++|++|.+ .|.+++++||++..........+
T Consensus 427 ~~~~~~~~~g~~~l~va~~~~~~G~i~-----------~~D~l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~~l 494 (645)
T 3j08_A 427 LALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISREL 494 (645)
T ss_dssp HHHHHHHTTTCCCEEEEETTEEEEEEE-----------EECCCTTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEE-----------ecCCchhHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 344556666778899999999875421 122467899999999997 69999999999988887776665
Q ss_pred Cc
Q 002285 672 NM 673 (942)
Q Consensus 672 ~l 673 (942)
++
T Consensus 495 gi 496 (645)
T 3j08_A 495 NL 496 (645)
T ss_dssp TC
T ss_pred CC
Confidence 43
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0072 Score=69.01 Aligned_cols=149 Identities=13% Similarity=0.010 Sum_probs=85.0
Q ss_pred CceEEEeeccccc-----CCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 374 RKVMLGVDRLDMI-----KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 374 ~~iIl~VgRLd~~-----KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
..++++.|++... |.+..+++|+..+ ++ .++.++. ++.... +. .+ .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g-----~~~~~~----l~----~~----~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFD-----AQQLEG----VA----NI----P--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCC-----TTTTSS----CS----SC----C---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEEC-----Ccchhh----hc----cC----C---
Confidence 4577889998764 8888999988654 22 2332221 111100 10 01 0
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNP 522 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP 522 (942)
..|. +.+++++. .+|..||++|.. -| ..++.|++++ +-|+|+..+.+ .++.+ ...|+++++
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~~---~G-~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVHH---GG-PGSWHTAAIH----GVPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEEC---CC-HHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEEC---CC-HHHHHHHHHh----CCCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1244 45778764 457999999973 34 5689999999 34677776633 23333 246888887
Q ss_pred C--CHHHHHHHHHHHhCCCHHHHHHHHHH-HhHHHHhcCHHHHHHHH
Q 002285 523 W--NITEVASSIGYALNMPADEREKRHLH-NFMHVTTHTSQEWAATF 566 (942)
Q Consensus 523 ~--D~~~lA~aI~~aL~m~~~er~~r~~~-~~~~v~~~~~~~W~~~f 566 (942)
. +.++++++|.++|+++ +.+ +++.+ ..+.........-++.+
T Consensus 386 ~~~~~~~l~~~i~~ll~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i 430 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP-AHR-AGAARMRDDMLAEPSPAEVVGIC 430 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH-HHH-HHHHHHHHHHHTSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH-HHH-HHHHHHHHHHHcCCCHHHHHHHH
Confidence 6 8899999999999854 333 34433 33334444444444433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.016 Score=70.95 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=53.7
Q ss_pred hhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 592 GAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 592 ~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
...+.+.....+.+++.+||+++.... ..-.+.+++.++|++|.+ .|..++++||+...........+
T Consensus 505 ~~~~~~~~~g~~~~~va~~~~~~G~i~-----------i~D~~~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~a~~ia~~l 572 (723)
T 3j09_A 505 LALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISREL 572 (723)
T ss_dssp HHHHHHHTTTCEEEEEEETTEEEEEEE-----------EECCSCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEe-----------ecCCcchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHc
Confidence 345566677789999999999875421 123477899999999997 69999999999988887766655
Q ss_pred Cc
Q 002285 672 NM 673 (942)
Q Consensus 672 ~l 673 (942)
++
T Consensus 573 gi 574 (723)
T 3j09_A 573 NL 574 (723)
T ss_dssp TC
T ss_pred CC
Confidence 43
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0024 Score=68.31 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=45.3
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhhcccC
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNFGEYN 672 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~ 672 (942)
..++|+||+||||++.. .+.+.+.++|++|.+ .|..|+++|| |+...+.+.+..++
T Consensus 13 ~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~lg 71 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHKLG 71 (284)
T ss_dssp GCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTT
T ss_pred cCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHHCC
Confidence 36799999999999751 245789999999997 6999999995 88888877776653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0045 Score=75.68 Aligned_cols=69 Identities=13% Similarity=0.248 Sum_probs=53.9
Q ss_pred hhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 593 AVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 593 ~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+.+.....+.+++.+||+++.... ..-.+.+++.++|++|.+ .|..|+++|||+..........++
T Consensus 525 ~~~~~~~~G~~vl~va~d~~~~G~i~-----------i~D~i~~~~~~aI~~L~~-~Gi~v~mlTGd~~~~a~~ia~~lg 592 (736)
T 3rfu_A 525 KADELRGKGASVMFMAVDGKTVALLV-----------VEDPIKSSTPETILELQQ-SGIEIVMLTGDSKRTAEAVAGTLG 592 (736)
T ss_dssp HHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCSSHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHHHHT
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEE-----------eeccchhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 34556677789999999999875421 122467889999999997 699999999999998887777655
Q ss_pred c
Q 002285 673 M 673 (942)
Q Consensus 673 l 673 (942)
+
T Consensus 593 i 593 (736)
T 3rfu_A 593 I 593 (736)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0044 Score=61.84 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=48.0
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC---------------Chhh
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS---------------DRNV 663 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR---------------~~~~ 663 (942)
.+..|+++||+||||+...... .... ......+.|.+.++|++|.+ .|.+++|+|+. ....
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~--~~~~-~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~ 86 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSD--FQVD-RFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQDGLGTQSFPQADFDGPHNL 86 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--C--CCCC-SGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECTTTTBTTBCHHHHHHHHHH
T ss_pred CCcCcEEEEeCCCCeEcCCCCC--cCcC-CHHHCcCCccHHHHHHHHHH-CCCEEEEEECCccccccccchHhhhhhHHH
Confidence 4578999999999998752100 0000 01245678999999999997 58999999998 3555
Q ss_pred HHHhhcccCc
Q 002285 664 LDDNFGEYNM 673 (942)
Q Consensus 664 L~~~~~~~~l 673 (942)
++..+..+++
T Consensus 87 ~~~~l~~~gl 96 (176)
T 2fpr_A 87 MMQIFTSQGV 96 (176)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 6666665544
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0076 Score=66.36 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=44.8
Q ss_pred CCCChhHHHHHHHhhhCC----------CCeEEEEcCCChhhHHHhhcccCc--------eEEeecceEEEeCCC
Q 002285 632 PKLHPDLKEPLKRLCDDP----------MTTVVVLSGSDRNVLDDNFGEYNM--------WLAAENGMFLRLTTG 688 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~----------g~~V~IvSGR~~~~L~~~~~~~~l--------~liaehG~~ir~~~~ 688 (942)
..++++.+++|.++.... ++.|+++|||+...+..+...+++ .++..+|+.+.+-++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~~~~~~~~~i~~~~~viFD~Dg 116 (335)
T 3n28_A 42 HYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMDS 116 (335)
T ss_dssp SCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEEEECTTCCCTTSCCEEEECSSC
T ss_pred CCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCEEEccCcccccCCCEEEEcCCC
Confidence 357888999999998545 789999999999999998887754 456677777775444
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0055 Score=62.24 Aligned_cols=42 Identities=7% Similarity=-0.155 Sum_probs=37.9
Q ss_pred ECC--CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVG--VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~g--vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.+ .+|+.+++.++++++ ++++.+++||| +.||.+|++.++.
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~a~~aG~ 181 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFG------VSPDRVVVVED-SVHGIHGARAAGM 181 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred ccCCCCcCHHHHHHHHHHcC------CChhHeEEEcC-CHHHHHHHHHCCC
Confidence 567 899999999999998 57899999999 9999999999864
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.26 Score=55.35 Aligned_cols=136 Identities=10% Similarity=0.037 Sum_probs=78.7
Q ss_pred CCceEEEeeccc-ccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCccc
Q 002285 373 GRKVMLGVDRLD-MIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVP 451 (942)
Q Consensus 373 ~~~iIl~VgRLd-~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~p 451 (942)
.+.|+++.|++. ..+.+..+++|++++ +++ + ++ ++++. +.. ..+. ...
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~--v-v~-~~g~~--~~~--------------~~~~------~~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR--V-VL-SSGWA--GLG--------------RIDE------GDD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC--E-EE-ECTTT--TCC--------------CSSC------CTT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE--E-EE-EeCCc--ccc--------------cccC------CCC
Confidence 456777889998 667777777787764 233 3 22 22111 000 0000 012
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc----cccc--CCceEEECCC--
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA----AQSL--GAGAILVNPW-- 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~----~~~l--g~~gllVnP~-- 523 (942)
|.+ .+++++. .++..||++|..+ |. .+..|++++ +-|+|+--+.+- +..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~---~ll~~~d~~v~~g---G~-~t~~Eal~~----GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQ---VLFGRVAAVVHHG---GA-GTTTAVTRA----GAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHH---HHGGGSSEEEECC---CH-HHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHH---HHHhhCcEEEECC---cH-HHHHHHHHc----CCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 443 4677765 4567899999665 33 578899999 235665554432 1112 1356777653
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
+.++++++|.++|+ + +.++++++..+.+
T Consensus 338 ~~~~l~~ai~~ll~--~-~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 338 TVESLSAALATALT--P-GIRARAAAVAGTI 365 (404)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHH
Confidence 78999999999997 3 3344444443333
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.012 Score=65.89 Aligned_cols=99 Identities=8% Similarity=-0.049 Sum_probs=62.9
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEE----eCCCCcc--ccc--CCceEEECCC
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLIL----SEFAGAA--QSL--GAGAILVNPW 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIl----Se~~G~~--~~l--g~~gllVnP~ 523 (942)
|.+ .++++. ..++..||++|.. |-..++.|||++ +-|+|+ .+..+.+ +.+ ...|+++++.
T Consensus 285 v~~-~~~~~~---~~ll~~ad~~v~~----~G~~t~~Eal~~----G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRA-VGWTPL---HTLLRTCTAVVHH----GGGGTVMTAIDA----GIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEE-ESSCCH---HHHHTTCSEEEEC----CCHHHHHHHHHH----TCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEE-EccCCH---HHHHhhCCEEEEC----CCHHHHHHHHHh----CCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 444 466654 4567789999953 445688999999 245666 4556666 666 3478888876
Q ss_pred --CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHH
Q 002285 524 --NITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFV 567 (942)
Q Consensus 524 --D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 567 (942)
+.+.++ ++|++ ++.|+++.+...+..........++.+.
T Consensus 353 ~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (398)
T 3oti_A 353 KVDADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRRIV 393 (398)
T ss_dssp GCCHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCCHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 455555 67764 4445444455555566667666665443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.011 Score=58.40 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=30.5
Q ss_pred EEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 773 VRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 773 V~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
..|...+|+.+++.+ . ++.+++||| +.||.+|++.++
T Consensus 134 ~~~~~~~k~~~l~~l----~--------~~~~i~iGD-~~~Di~~~~~ag 170 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF----R--------DGFILAMGD-GYADAKMFERAD 170 (201)
T ss_dssp EECCSSCHHHHHGGG----T--------TSCEEEEEC-TTCCHHHHHHCS
T ss_pred CcCCccCHHHHHHhc----C--------cCcEEEEeC-CHHHHHHHHhCC
Confidence 455667899998877 2 577999999 999999999884
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.0064 Score=63.72 Aligned_cols=43 Identities=9% Similarity=-0.148 Sum_probs=37.8
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCC-ceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPI-DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.+..|+.+++.++++++ +++ +.+++||| +.||.+|++.++-
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~iGD-~~nDi~~a~~aG~ 199 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELG------VYPMNHMIKVGD-TVSDMKEGRNAGM 199 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHT------CCSGGGEEEEES-SHHHHHHHHHTTS
T ss_pred cCCCCCCHHHHHHHHHHhC------CCCCcCEEEEeC-CHHHHHHHHHCCC
Confidence 3567789999999999998 566 89999999 9999999999974
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.51 E-value=0.003 Score=65.14 Aligned_cols=60 Identities=3% Similarity=-0.067 Sum_probs=36.7
Q ss_pred CCEEEEEecCCccCCCCCccC--C--CCCccc----------------cCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 601 NNRLLILGFNATLTAPVDFLG--R--RGGQIR----------------EMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~--~--~~~~~~----------------~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
..++|+||+||||++..+.-- . ...... .....+.+.+.++|+.|.+ .|..++|+|+++
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~-~G~~l~ivTn~~ 114 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR-RGDAIFFVTGRS 114 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-HTCEEEEEECSC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-CCCEEEEEcCCc
Confidence 468999999999998521000 0 000000 0011234578888888876 588899999886
Q ss_pred h
Q 002285 661 R 661 (942)
Q Consensus 661 ~ 661 (942)
.
T Consensus 115 ~ 115 (211)
T 2b82_A 115 P 115 (211)
T ss_dssp C
T ss_pred H
Confidence 4
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.0063 Score=64.98 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=50.7
Q ss_pred cCCEEEEEecCCccCCCCCc-------cCCCCCc------cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh----h
Q 002285 600 SNNRLLILGFNATLTAPVDF-------LGRRGGQ------IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR----N 662 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~-------P~~~~~~------~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~----~ 662 (942)
.++.+|+||+||||++.... .... +. +......+-|.+++.|+.|.+ .|..|+|+|||+. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f-~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~ 133 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPF-DGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKS 133 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCC-CHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccC-CHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHH
Confidence 45679999999999987420 0000 00 011245577899999999997 5999999999975 4
Q ss_pred hHHHhhcccCce
Q 002285 663 VLDDNFGEYNMW 674 (942)
Q Consensus 663 ~L~~~~~~~~l~ 674 (942)
....++..+++.
T Consensus 134 ~T~~~L~~lGi~ 145 (262)
T 3ocu_A 134 GTIDDMKRLGFN 145 (262)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHcCcC
Confidence 666777766554
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.0078 Score=60.54 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=24.1
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHH
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDD 666 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~ 666 (942)
..+.|.+.++|++|.+.+|..++|+|+++...++.
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~ 106 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHC 106 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTT
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHH
Confidence 34667888888888762267888888877654433
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.27 E-value=0.007 Score=64.54 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=49.5
Q ss_pred cCCEEEEEecCCccCCCCCccC-----CCCCc-------cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChh----h
Q 002285 600 SNNRLLILGFNATLTAPVDFLG-----RRGGQ-------IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRN----V 663 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~-----~~~~~-------~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~----~ 663 (942)
.++.+++||+||||++....-. ...-. +......+-|.+++.|+.|.+ .|..|+|+|||+.. .
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHH
Confidence 3456999999999998632100 00000 012345677899999999997 59999999999754 6
Q ss_pred HHHhhcccCce
Q 002285 664 LDDNFGEYNMW 674 (942)
Q Consensus 664 L~~~~~~~~l~ 674 (942)
...++..+++.
T Consensus 135 T~~~L~~lGi~ 145 (260)
T 3pct_A 135 TVDDMKRLGFT 145 (260)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCcC
Confidence 66777765543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.02 Score=58.66 Aligned_cols=42 Identities=10% Similarity=-0.175 Sum_probs=37.4
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+..|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 162 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~ 203 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGG------FKPNEALVIEN-APLGVQAGVAAGI 203 (247)
T ss_dssp SSCTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHHHHHTTS
T ss_pred CCCCCCCHHHHHHHHHcC------CChhheEEEeC-CHHHHHHHHHCCC
Confidence 456788999999999998 67899999999 9999999999864
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.034 Score=57.25 Aligned_cols=42 Identities=10% Similarity=-0.148 Sum_probs=37.2
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+..|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 163 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~ 204 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGG------LKADEAVVIEN-APLGVEAGHKAGI 204 (243)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCGGGEEEEEC-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHCCC
Confidence 456678899999999998 67899999999 9999999999864
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.025 Score=55.80 Aligned_cols=40 Identities=20% Similarity=0.051 Sum_probs=34.6
Q ss_pred CCCH--HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 777 GVTK--GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 777 gvnK--G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+..| ..+++.++++++ ++++.+++||| +.||.+|++.++.
T Consensus 137 ~~~Kp~~~~~~~~~~~~~------i~~~~~~~iGD-~~nDi~~~~~aG~ 178 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSGI 178 (207)
T ss_dssp CCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCCcHHHHHHHHHhC------CCcccEEEECC-CHHHHHHHHHCCC
Confidence 3455 889999999998 57899999999 9999999999864
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.038 Score=55.39 Aligned_cols=41 Identities=7% Similarity=-0.031 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+-.|+.+++.+++.++ ++++.+++||| ..||..|.+.++-
T Consensus 125 ~~kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~Di~~a~~aG~ 165 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAWD------VSPSRMVMVGD-YRFDLDCGRAAGT 165 (205)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCC
Confidence 45567889999999998 57899999999 9999999999864
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.04 Score=56.80 Aligned_cols=45 Identities=7% Similarity=-0.154 Sum_probs=40.0
Q ss_pred EEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 772 EVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 772 EV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|..+.+..|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~a~~aG~ 211 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLD------LPPQEVMLCAA-HNYDLKAARALGL 211 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHTTC
T ss_pred cccccCCCCHHHHHHHHHHcC------CChHHEEEEcC-chHhHHHHHHCCC
Confidence 445678899999999999998 67899999999 9999999999975
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.022 Score=64.99 Aligned_cols=58 Identities=12% Similarity=0.097 Sum_probs=39.6
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
...++++||+||||+.....- .... ...+-..+.|.+.++|+.|.+ .|..++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~-~~~~-~~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK-VFPT-SPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS-SSCS-STTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCc-cCCC-CHHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 356899999999998642100 0000 000112367899999999997 599999999976
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=94.45 E-value=0.039 Score=56.54 Aligned_cols=42 Identities=10% Similarity=-0.192 Sum_probs=37.1
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 166 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~a~~aG~ 207 (254)
T 3umg_A 166 RKYKPDPQAYLRTAQVLG------LHPGEVMLAAA-HNGDLEAAHATGL 207 (254)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CChHHEEEEeC-ChHhHHHHHHCCC
Confidence 345678999999999998 67899999999 9999999999975
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=0.021 Score=57.36 Aligned_cols=39 Identities=13% Similarity=0.177 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.+.+.++|+.|.+ .|..++|+|+.+...++..+..++
T Consensus 70 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 108 (205)
T 3m9l_A 70 RPAPGAVELVRELAG-RGYRLGILTRNARELAHVTLEAIG 108 (205)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHHh-cCCeEEEEeCCchHHHHHHHHHcC
Confidence 467789999999987 589999999999988888777654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.015 Score=59.04 Aligned_cols=42 Identities=21% Similarity=0.107 Sum_probs=37.2
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+..|+.+++.+++.++ ++++.+++||| +.||..|.+.++-
T Consensus 144 ~~~kp~~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~a~~aG~ 185 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIG------APIDECLVIGD-AIWDMLAARRCKA 185 (233)
T ss_dssp SCCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHhC------CCHHHEEEEeC-CHHhHHHHHHCCC
Confidence 456678999999999998 67899999999 9999999999864
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=94.32 E-value=0.051 Score=56.53 Aligned_cols=41 Identities=5% Similarity=-0.160 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+-.|+.+++.+++.++ ++++.+++||| ..||..|.+.++-
T Consensus 166 ~~Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~a~~aG~ 206 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLG------ILPERCVVIED-SVTGGAAGLAAGA 206 (259)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCChHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHHHHHCCC
Confidence 45567999999999998 67899999999 9999999999964
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.26 E-value=0.033 Score=58.14 Aligned_cols=43 Identities=5% Similarity=-0.208 Sum_probs=38.2
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCC-ceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPI-DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.+..|+.+++.++++++ +++ +.+++||| ..||..|.+.++-
T Consensus 164 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~a~~aG~ 207 (277)
T 3iru_A 164 VVRGRPFPDMALKVALELE------VGHVNGCIKVDD-TLPGIEEGLRAGM 207 (277)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CSCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCccEEEEcC-CHHHHHHHHHCCC
Confidence 4567789999999999998 567 99999999 9999999999974
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=94.14 E-value=0.88 Score=55.48 Aligned_cols=175 Identities=13% Similarity=0.097 Sum_probs=108.2
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
+..++.+..++. |=-+..++.+.++|++.|+-+ ++| ...+ ... ++.+.+.+.+. |. +-..|
T Consensus 522 ~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~--L~L--l~~~----~~~----~~~l~~~~~~~----gi-~~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSV--LWL--LRFP----AVG----EPNIQQYAQNM----GL-PQNRI 582 (723)
T ss_dssp TSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEE--EEE--EETT----GGG----HHHHHHHHHHT----TC-CGGGE
T ss_pred CCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCe--EEE--EeCc----HHH----HHHHHHHHHhc----CC-CcCeE
Confidence 334444555554 446889999999999999854 444 3322 111 12233333332 21 11236
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc-cc-----c---CCceEEECCC
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA-QS-----L---GAGAILVNPW 523 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~-~~-----l---g~~gllVnP~ 523 (942)
+|. +.++.++..+.|+.+||+|-|--+-| +.+..||+.+ |++|+|-.+... .- | |-.-++. .
T Consensus 583 ~f~-~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--~ 653 (723)
T 4gyw_A 583 IFS-PVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELIA--K 653 (723)
T ss_dssp EEE-ECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--S
T ss_pred EEC-CCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCccccc--C
Confidence 654 56789999999999999999988866 7899999999 888888543211 11 1 2222222 4
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHh---cCHHHHHHHHHHHHHHhHHH
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHVTT---HTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~L~~~~~~ 576 (942)
|.++..+.-.++.++ ++.+....+++++...+ +|...|++.|...+...+..
T Consensus 654 ~~~~Y~~~a~~la~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 654 NRQEYEDIAVKLGTD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 566655544444444 33444444445554433 68999999998888888765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.09 E-value=0.056 Score=54.64 Aligned_cols=38 Identities=8% Similarity=0.026 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 153 p~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 190 (230)
T 3um9_A 153 PHQKVYELAMDTLH------LGESEILFVSC-NSWDATGAKYFGY 190 (230)
T ss_dssp TCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHhC------CCcccEEEEeC-CHHHHHHHHHCCC
Confidence 46777888999998 57899999999 9999999999975
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.94 E-value=0.076 Score=53.63 Aligned_cols=38 Identities=13% Similarity=0.103 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
.|+.+++.++++++ ++++.+++||| +. ||.+|.+.++-
T Consensus 159 p~~~~~~~~~~~lg------i~~~~~~~iGD-~~~nDi~~a~~aG~ 197 (235)
T 2om6_A 159 PRKEMFEKVLNSFE------VKPEESLHIGD-TYAEDYQGARKVGM 197 (235)
T ss_dssp TCHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHHHHHTTS
T ss_pred CCHHHHHHHHHHcC------CCccceEEECC-ChHHHHHHHHHCCC
Confidence 57889999999998 67899999999 98 99999999975
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.52 E-value=0.044 Score=61.12 Aligned_cols=53 Identities=11% Similarity=0.121 Sum_probs=40.4
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC---hhhHHHhhc
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD---RNVLDDNFG 669 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~---~~~L~~~~~ 669 (942)
+.+.++||+||||... ..+-|.+.++|+.|.+ .|..++++|+.+ .....+.+.
T Consensus 12 ~~~~~l~D~DGvl~~g---------------~~~~p~a~~~l~~l~~-~g~~~~~vTNn~~~~~~~~~~~l~ 67 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRG---------------KKPIAGASDALKLLNR-NKIPYILLTNGGGFSERARTEFIS 67 (352)
T ss_dssp CCEEEEECCBTTTEET---------------TEECTTHHHHHHHHHH-TTCCEEEECSCCSSCHHHHHHHHH
T ss_pred cCCEEEEECCCeeEcC---------------CeeCcCHHHHHHHHHH-CCCEEEEEeCCCCCCchHHHHHHH
Confidence 6789999999999975 1244789999999987 599999999654 455444443
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=93.36 E-value=0.064 Score=54.43 Aligned_cols=37 Identities=16% Similarity=-0.031 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|..+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 157 ~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~~G~ 193 (233)
T 3umb_A 157 APAAYALAPRAFG------VPAAQILFVSS-NGWDACGATWHGF 193 (233)
T ss_dssp SHHHHTHHHHHHT------SCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhC------CCcccEEEEeC-CHHHHHHHHHcCC
Confidence 4556777888887 57899999999 9999999999864
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=93.25 E-value=0.076 Score=53.95 Aligned_cols=41 Identities=27% Similarity=0.521 Sum_probs=33.6
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
..+.|.+.++|+.|.+ .|..++|+|+.+...++..+..+++
T Consensus 85 ~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~gl 125 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASKLNI 125 (225)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHHHH-CCCcEEEEeCChHHHHHHHHHHcCC
Confidence 4567889999999987 5899999999998888887776543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.18 E-value=0.17 Score=51.19 Aligned_cols=42 Identities=14% Similarity=-0.051 Sum_probs=36.7
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
..+-.|+.+++.++++++ ++++.+++||| +. ||..|.+.++-
T Consensus 159 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~a~~aG~ 201 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQ------SELRESLMIGD-SWEADITGAHGVGM 201 (240)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHHHHHcCC
Confidence 345678999999999998 67899999999 95 99999999975
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=93.02 E-value=0.38 Score=54.10 Aligned_cols=122 Identities=11% Similarity=0.014 Sum_probs=74.7
Q ss_pred CCceEEEeecc-cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCccc
Q 002285 373 GRKVMLGVDRL-DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVP 451 (942)
Q Consensus 373 ~~~iIl~VgRL-d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~p 451 (942)
...++++.|++ +..|.+..+++|++++ + .+ + ++ +.+ .... + . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~--~-v~-~~g----~~~~--~----~----~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR--V-IL-SRG----WADL--V----L----PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC--E-EE-CTT----CTTC--C----C----SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce--E-EE-EeC----CCcc--c----c----cCCC--------CC
Confidence 35678889999 6888888888888765 1 22 2 22 211 1110 0 0 0010 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC--
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 523 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~-- 523 (942)
|. +.+++++.+ +|..||+||..+ |+ .++.||+++ +-|+|+....+ .+..+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~~---G~-~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHHG---GA-GTTHVAARA----GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHH---HHhhCCEEEeCC---Ch-hHHHHHHHc----CCCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 43 467788765 469999999753 44 689999999 24566665543 22223 2467888764
Q ss_pred CHHHHHHHHHHHhCC
Q 002285 524 NITEVASSIGYALNM 538 (942)
Q Consensus 524 D~~~lA~aI~~aL~m 538 (942)
+.++++++|.++ ++
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 789999999999 64
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=93.01 E-value=0.059 Score=55.22 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=38.1
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCC-CceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTP-IDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~-~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.+..|+.+++.+++.++ ++ ++.+++||| ..||..|.+.++-
T Consensus 162 ~~~~kp~~~~~~~~~~~~g------~~~~~~~i~vGD-~~~Di~~a~~aG~ 205 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLCN------VKDKDKVIMVGD-RKYDIIGAKKIGI 205 (240)
T ss_dssp TSCCCCHHHHHHHHHHHHT------CCCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCCcEEEECC-CHHHHHHHHHCCC
Confidence 3456789999999999998 67 899999999 9999999999964
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=92.68 E-value=0.36 Score=61.31 Aligned_cols=39 Identities=5% Similarity=0.054 Sum_probs=34.1
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.+++.++|++|.+ .|+.|+++|||...........++
T Consensus 604 p~r~~~~~aI~~l~~-aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRT-AGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred CCchhHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcC
Confidence 477899999999987 699999999999999988777654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=92.55 E-value=0.044 Score=54.72 Aligned_cols=35 Identities=9% Similarity=-0.184 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|+.+++.++++++ ++.+++||| ..+|..|.+.++-
T Consensus 130 ~~~~~~~~~~~~~--------~~~~~~vGD-~~~Di~~a~~aG~ 164 (201)
T 2w43_A 130 SPKVYKYFLDSIG--------AKEAFLVSS-NAFDVIGAKNAGM 164 (201)
T ss_dssp CHHHHHHHHHHHT--------CSCCEEEES-CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhcC--------CCcEEEEeC-CHHHhHHHHHCCC
Confidence 3566667777764 466899999 9999999999864
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=92.51 E-value=0.14 Score=51.76 Aligned_cols=42 Identities=12% Similarity=0.010 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
.+-.|+.+++.++++++. ++++.+++||| +. ||..|.+.++-
T Consensus 156 ~~kp~~~~~~~~~~~~g~-----~~~~~~i~vGD-~~~~Di~~a~~aG~ 198 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERIPQ-----FSAEHTLIIGD-SLTADIKGGQLAGL 198 (238)
T ss_dssp SCTTCHHHHHHHHHTSTT-----CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCCChHHHHHHHHHcCC-----CChhHeEEECC-CcHHHHHHHHHCCC
Confidence 455679999999999860 35799999999 97 99999999964
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=92.45 E-value=0.14 Score=53.08 Aligned_cols=38 Identities=11% Similarity=-0.115 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|..+++.++++++ ++++.+++||| ..+|..|.+.++-
T Consensus 148 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~ 185 (253)
T 1qq5_A 148 PHPDSYALVEEVLG------VTPAEVLFVSS-NGFDVGGAKNFGF 185 (253)
T ss_dssp TSHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcC------CCHHHEEEEeC-ChhhHHHHHHCCC
Confidence 45677788889887 56899999999 9999999999975
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=92.31 E-value=0.12 Score=51.22 Aligned_cols=37 Identities=11% Similarity=-0.055 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 147 ~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~ 183 (214)
T 3e58_A 147 NPEIYLTALKQLN------VQASRALIIED-SEKGIAAGVAADV 183 (214)
T ss_dssp SSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHcC------CChHHeEEEec-cHhhHHHHHHCCC
Confidence 5667888999988 57899999999 9999999999975
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=92.20 E-value=0.07 Score=53.92 Aligned_cols=21 Identities=5% Similarity=0.108 Sum_probs=16.7
Q ss_pred CccceecCCHHHHHHHHHHhh
Q 002285 916 SNARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 916 s~A~y~l~~~~~V~~~L~~L~ 936 (942)
..|.|.+++..|+..+|..+-
T Consensus 207 ~~~~~~~~~~~el~~~l~~~~ 227 (230)
T 3um9_A 207 VVPDIVVSDVGVLASRFSPVD 227 (230)
T ss_dssp CCCSEEESSHHHHHHTCCC--
T ss_pred CCCcEEeCCHHHHHHHHHHhh
Confidence 468999999999999887663
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=92.00 E-value=0.47 Score=47.76 Aligned_cols=41 Identities=12% Similarity=-0.088 Sum_probs=32.5
Q ss_pred ECCCCHH---HHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 775 AVGVTKG---AAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG---~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
...-+++ .|++. +++++ ++++.+++||| +. ||..|.+.++-
T Consensus 150 ~~KP~~~~~~~~l~~-~~~lg------i~~~~~~~vGD-~~~~Di~~a~~aG~ 194 (240)
T 3smv_A 150 SYKPNPNNFTYMIDA-LAKAG------IEKKDILHTAE-SLYHDHIPANDAGL 194 (240)
T ss_dssp SCTTSHHHHHHHHHH-HHHTT------CCGGGEEEEES-CTTTTHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHH-HHhcC------CCchhEEEECC-CchhhhHHHHHcCC
Confidence 3445666 56666 88887 67899999999 95 99999999975
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.79 E-value=0.35 Score=49.53 Aligned_cols=41 Identities=12% Similarity=-0.027 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
.+-.|..+++.+++.++ ++++.+++||| .. ||..|.+.++-
T Consensus 148 ~~Kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 148 VKKPHPKIFKKALKAFN------VKPEEALMVGD-RLYSDIYGAKRVGM 189 (241)
T ss_dssp CCTTCHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHHHHHCCC
Confidence 34567789999999998 56899999999 98 99999999864
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=91.12 E-value=0.07 Score=53.07 Aligned_cols=35 Identities=3% Similarity=-0.144 Sum_probs=29.3
Q ss_pred HHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 782 AAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 782 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+++.+++.++ ++++.+++||| +.+|..|.+.++-
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 152 RIYQHVLQAEG------FSPSDTVFFDD-NADNIEGANQLGI 186 (206)
T ss_dssp HHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHTTTC
T ss_pred HHHHHHHHHcC------CCHHHeEEeCC-CHHHHHHHHHcCC
Confidence 46678888887 56789999999 9999999988864
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=91.11 E-value=0.092 Score=51.94 Aligned_cols=16 Identities=13% Similarity=0.202 Sum_probs=14.1
Q ss_pred CCEEEEEecCCccCCC
Q 002285 601 NNRLLILGFNATLTAP 616 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~ 616 (942)
..|+|+||+||||++.
T Consensus 4 m~k~i~fDlDGTL~~~ 19 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDT 19 (214)
T ss_dssp CCCEEEEESBTTTBCC
T ss_pred cccEEEEcCCCCcccc
Confidence 3689999999999986
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=91.11 E-value=0.14 Score=51.55 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=33.3
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+.+.+.+.|+.|.+ .|..++|+|+.+...++..+..++
T Consensus 90 ~~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 129 (233)
T 3s6j_A 90 IIALPGAVELLETLDK-ENLKWCIATSGGIDTATINLKALK 129 (233)
T ss_dssp CEECTTHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHTTT
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEeCCchhhHHHHHHhcc
Confidence 3567788999999987 589999999999988888877654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=90.81 E-value=0.3 Score=50.70 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=30.4
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
.+.+.+.+.|+.|.+ .+..++|+|+.+...++..+..+
T Consensus 111 ~~~~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~~~ 148 (277)
T 3iru_A 111 QLIPGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALIAA 148 (277)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHhc
Confidence 456778889999987 58999999999988777766554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=90.62 E-value=0.19 Score=50.79 Aligned_cols=21 Identities=5% Similarity=-0.051 Sum_probs=16.6
Q ss_pred CccceecCCHHHHHHHHHHhh
Q 002285 916 SNARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 916 s~A~y~l~~~~~V~~~L~~L~ 936 (942)
..|.|.+++..|+.++|....
T Consensus 210 ~~~~~v~~~~~el~~~l~~~~ 230 (233)
T 3umb_A 210 VAPAAAGHDMRDLLQFVQARQ 230 (233)
T ss_dssp CCCSEEESSHHHHHHHHHC--
T ss_pred CCCCEEECCHHHHHHHHHHhh
Confidence 358999999999999987643
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=90.46 E-value=0.1 Score=52.20 Aligned_cols=38 Identities=0% Similarity=-0.254 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+.+++.++++++ ++++.+++||| ..||.+|++.++.
T Consensus 151 p~~~~~~~~~~~~~------i~~~~~i~iGD-~~nDi~~a~~aG~ 188 (226)
T 1te2_A 151 PHPQVYLDCAAKLG------VDPLTCVALED-SVNGMIASKAARM 188 (226)
T ss_dssp TSTHHHHHHHHHHT------SCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHcCC
Confidence 44999999999998 57899999999 9999999999975
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=90.42 E-value=0.3 Score=50.52 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=18.8
Q ss_pred CccceecCCHHHHHHHHHHhhhCcC
Q 002285 916 SNARYFLGSSGDVVTLLNELAECPQ 940 (942)
Q Consensus 916 s~A~y~l~~~~~V~~~L~~L~~~~~ 940 (942)
..|.|.+++..|+..+|..+..+.+
T Consensus 225 ~~~~~~~~~~~el~~~l~~~~~~~~ 249 (253)
T 1qq5_A 225 EAPDFVVPALGDLPRLVRGMAGAHL 249 (253)
T ss_dssp CCCSEEESSGGGHHHHHHHHC----
T ss_pred CCCCeeeCCHHHHHHHHHHhccccc
Confidence 4588999999999999999876544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=90.24 E-value=0.22 Score=51.22 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=37.1
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|+.++..++++++ ++++.+++||| ..||..|.+.++-
T Consensus 162 ~~~Kp~p~~~~~~~~~l~------~~~~~~~~vGD-s~~Di~~a~~aG~ 203 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLG------VPRDKCVYIGD-SEIDIQTARNSEM 203 (240)
T ss_dssp SCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCC
Confidence 456788999999999998 67899999999 9999999999864
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=90.02 E-value=0.25 Score=50.26 Aligned_cols=38 Identities=11% Similarity=0.039 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+.+++.+++.++ ++++.+++||| +.+|..|.+.++-
T Consensus 140 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~ 177 (222)
T 2nyv_A 140 PSPTPVLKTLEILG------EEPEKALIVGD-TDADIEAGKRAGT 177 (222)
T ss_dssp CTTHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHhC------CCchhEEEECC-CHHHHHHHHHCCC
Confidence 78999999999998 56899999999 9999999998864
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=89.71 E-value=0.29 Score=48.76 Aligned_cols=39 Identities=18% Similarity=0.049 Sum_probs=29.2
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+.|.+.+.|+.|.+ . ..++|+|+.+...++.++..++
T Consensus 68 ~~~~~g~~~~l~~l~~-~-~~~~i~s~~~~~~~~~~l~~~g 106 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRE-R-FQVVILSDTFYEFSQPLMRQLG 106 (206)
T ss_dssp CCCCTTHHHHHHHHHT-T-SEEEEEEEEEHHHHHHHHHHTT
T ss_pred cCCCccHHHHHHHHHh-c-CcEEEEECChHHHHHHHHHHcC
Confidence 3456788888888876 3 8888888888777777666544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.65 E-value=0.25 Score=51.75 Aligned_cols=40 Identities=8% Similarity=-0.202 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
+-.|..+++.+++.++ ++++.+++||| +. +|..|.+.++-
T Consensus 160 ~Kp~~~~~~~~~~~~g------~~~~~~~~vGD-~~~~Di~~a~~aG~ 200 (263)
T 3k1z_A 160 PKPDPRIFQEALRLAH------MEPVVAAHVGD-NYLCDYQGPRAVGM 200 (263)
T ss_dssp CTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHTHHHHTTTC
T ss_pred CCCCHHHHHHHHHHcC------CCHHHEEEECC-CcHHHHHHHHHCCC
Confidence 4456788999999998 67899999999 96 99999998864
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=89.62 E-value=1.1 Score=50.19 Aligned_cols=92 Identities=5% Similarity=-0.044 Sum_probs=59.8
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC--CHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW--NIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~--D~~ 526 (942)
+.+++++. .+|..||+||..+ | ..+++|++++ +-|+|+....+ .+..+ ...|+.+++. +.+
T Consensus 309 ~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~ 377 (424)
T 2iya_A 309 VHQWVPQL---DILTKASAFITHA---G-MGSTMEALSN----AVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAE 377 (424)
T ss_dssp EESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHH
T ss_pred EecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHc----CCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHH
Confidence 34667765 6899999988643 3 3689999999 24566665532 12222 2467888765 889
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCH
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTTHTS 559 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~ 559 (942)
+++++|.++|+++ +.++++++..+.+...+.
T Consensus 378 ~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~ 408 (424)
T 2iya_A 378 KLREAVLAVASDP--GVAERLAAVRQEIREAGG 408 (424)
T ss_dssp HHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCc
Confidence 9999999999754 334445444444444343
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.15 E-value=0.22 Score=50.64 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=51.2
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCcc---------ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQI---------REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFG 669 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~---------~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~ 669 (942)
..++++++||+||||+.....|....+.. ......+-|.+.+.|+.|.+ ...++|+|.-+...++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 35788999999999997644431111100 00112456899999999997 39999999999999988887
Q ss_pred ccC
Q 002285 670 EYN 672 (942)
Q Consensus 670 ~~~ 672 (942)
.++
T Consensus 103 ~ld 105 (195)
T 2hhl_A 103 LLD 105 (195)
T ss_dssp HHC
T ss_pred HhC
Confidence 763
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=89.12 E-value=0.24 Score=49.34 Aligned_cols=35 Identities=6% Similarity=-0.093 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 782 AAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 782 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+++.+++.++ ++++.+++||| +.+|..|.+.++-
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 154 DIFLEMIADSG------MKPEETLFIDD-GPANVATAERLGF 188 (211)
T ss_dssp HHHHHHHHHHC------CCGGGEEEECS-CHHHHHHHHHTTC
T ss_pred HHHHHHHHHhC------CChHHeEEeCC-CHHHHHHHHHcCC
Confidence 45567888887 56899999999 9999999999864
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=88.84 E-value=0.42 Score=47.92 Aligned_cols=38 Identities=11% Similarity=0.184 Sum_probs=29.7
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
.+.|.+.++|+.|.+ .|.+++|+|+.+...+...+..+
T Consensus 84 ~~~pg~~~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 84 KENPGVREALEFVKS-KRIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHH-cCCCcccccCCcHHHHHHHHHhc
Confidence 456778888888887 58899999998888777666554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.66 E-value=0.13 Score=53.12 Aligned_cols=42 Identities=7% Similarity=-0.057 Sum_probs=35.7
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCC--ceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPI--DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~--d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|..+++.++++++ +++ +.+++||| ..||..|.+.++-
T Consensus 168 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~i~iGD-~~~Di~~a~~aG~ 211 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFS------PPPAMEKCLVFED-APNGVEAALAAGM 211 (250)
T ss_dssp CSCTTSTHHHHHHHHTSS------SCCCGGGEEEEES-SHHHHHHHHHTTC
T ss_pred cCCCCChHHHHHHHHHcC------CCCCcceEEEEeC-CHHHHHHHHHcCC
Confidence 345567889999999998 455 99999999 9999999999974
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=88.55 E-value=0.17 Score=51.68 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=32.7
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.|.+.++|+.|.+ .|..++|+|+.+...++..+..++
T Consensus 110 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 148 (240)
T 3sd7_A 110 KIYENMKEILEMLYK-NGKILLVATSKPTVFAETILRYFD 148 (240)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTT
T ss_pred ccCccHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHHcC
Confidence 467788999999987 589999999999888888777654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=88.37 E-value=0.038 Score=55.43 Aligned_cols=38 Identities=3% Similarity=-0.198 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+.+++.++++++ ++++.+++||| ..||.+|++.++.
T Consensus 146 p~~~~~~~~~~~lg------i~~~~~i~iGD-~~nDi~~a~~aG~ 183 (221)
T 2wf7_A 146 PAPDIFIAAAHAVG------VAPSESIGLED-SQAGIQAIKDSGA 183 (221)
T ss_dssp TSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHcC------CChhHeEEEeC-CHHHHHHHHHCCC
Confidence 34569999999998 67899999999 9999999999964
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=88.14 E-value=0.29 Score=49.04 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=50.8
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCcc---------ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQI---------REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~---------~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
.++++++||+|+||+.....|....+.. ......+-|.+.+.|++|.+ ...++|+|.-+...++..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHHH
Confidence 4678999999999997654442111100 00113457899999999997 499999999999999888876
Q ss_pred cC
Q 002285 671 YN 672 (942)
Q Consensus 671 ~~ 672 (942)
++
T Consensus 91 ld 92 (181)
T 2ght_A 91 LD 92 (181)
T ss_dssp HC
T ss_pred HC
Confidence 63
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=87.96 E-value=0.52 Score=47.83 Aligned_cols=35 Identities=3% Similarity=-0.072 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 782 AAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 782 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+++.+++.++ ++++.+++||| +.+|..|.+.++-
T Consensus 177 ~~~~~~~~~~g------~~~~~~~~vGD-~~~Di~~a~~aG~ 211 (229)
T 4dcc_A 177 EIFKAVTEDAG------IDPKETFFIDD-SEINCKVAQELGI 211 (229)
T ss_dssp HHHHHHHHHHT------CCGGGEEEECS-CHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC------CCHHHeEEECC-CHHHHHHHHHcCC
Confidence 55678888887 56899999999 9999999999974
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.16 E-value=0.49 Score=47.55 Aligned_cols=42 Identities=14% Similarity=-0.045 Sum_probs=37.3
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|...+..++++++ ++++.+++||| ..+|..|.+.++-
T Consensus 134 ~~~Kp~p~~~~~~~~~lg------~~p~~~~~vgD-s~~Di~~a~~aG~ 175 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLGARETGI 175 (210)
T ss_dssp SSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHHHcC------CCcccEEEECC-CHHHHHHHHHCCC
Confidence 556789999999999998 57899999999 9999999999864
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=86.75 E-value=0.2 Score=50.05 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=29.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhC-C-CCeEEEEcCCChhh
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDD-P-MTTVVVLSGSDRNV 663 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d-~-g~~V~IvSGR~~~~ 663 (942)
.|+|+||+||||++. ...+++...++++++... . +..+...+||+...
T Consensus 2 ~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 51 (221)
T 2wf7_A 2 FKAVLFDLDGVITDT--------------AEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRED 51 (221)
T ss_dssp CCEEEECCBTTTBTH--------------HHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHH
T ss_pred CcEEEECCCCcccCC--------------hHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHH
Confidence 368999999999985 223456677777776431 0 11222356665544
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=86.66 E-value=0.13 Score=51.42 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=22.0
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHh
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRL 645 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L 645 (942)
.++|+||+||||++.. ..+.+...++++++
T Consensus 9 ~k~i~fDlDGTL~~~~--------------~~~~~~~~~~~~~~ 38 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSE--------------PLWDRAELDVMASL 38 (226)
T ss_dssp CCEEEECCBTTTBCCH--------------HHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCcCcCH--------------HHHHHHHHHHHHHc
Confidence 5799999999999862 22445666777765
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=86.49 E-value=0.73 Score=49.31 Aligned_cols=59 Identities=17% Similarity=0.072 Sum_probs=41.2
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChh
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRN 662 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~ 662 (942)
..+.+++|.|||+......-. .+-..-....+-|.+.++|+.|.+ .|..++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~--~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGP--YDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCT--TCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCc--hhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 346788999999987632110 000001234567999999999997 69999999999854
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=86.17 E-value=1.1 Score=46.91 Aligned_cols=36 Identities=6% Similarity=-0.161 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCC-CCCHHHHHhcCc
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFL-QKDEDIYTFFEP 823 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMF~~~~~ 823 (942)
...+..+++.++ ++++.+++||| + .+|..+-+.++-
T Consensus 179 p~~~~~~~~~~~------~~~~~~~~vGD-s~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 179 PSIFYHCCDLLG------VQPGDCVMVGD-TLETDIQGGLNAGL 215 (260)
T ss_dssp HHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHHHHHTTC
T ss_pred HHHHHHHHHHcC------CChhhEEEECC-CchhhHHHHHHCCC
Confidence 668889999988 56899999999 8 899999888753
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.67 E-value=0.29 Score=48.75 Aligned_cols=40 Identities=18% Similarity=0.079 Sum_probs=36.5
Q ss_pred CCCH--HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 777 GVTK--GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 777 gvnK--G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.+| +.+++.+++.++ ++++.+++||| +.||..|.+.++-
T Consensus 135 ~~~KP~~~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~~a~~aG~ 176 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQTAQAANV 176 (209)
T ss_dssp SCCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCCcHHHHHHHHHcC------CCcccEEEECC-ChhhHHHHHHcCC
Confidence 6789 999999999998 57899999999 9999999999975
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=85.45 E-value=0.66 Score=51.29 Aligned_cols=89 Identities=10% Similarity=-0.039 Sum_probs=52.8
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCCCHHHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPWNITEV 528 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~D~~~l 528 (942)
+...+++. .+|..+|+||.- -|+| ++.|++++ +-|+|+--+.+ .+..+ ...|+.+++.+ .+
T Consensus 292 ~~~~~p~~---~lL~~~~~~v~h---~G~~-s~~Eal~~----GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~--~~ 358 (400)
T 4amg_A 292 VVEWIPLG---ALLETCDAIIHH---GGSG-TLLTALAA----GVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGS--LG 358 (400)
T ss_dssp EECCCCHH---HHHTTCSEEEEC---CCHH-HHHHHHHH----TCCEEECCC---CHHHHHHHHHHTSEEECCTTT--CS
T ss_pred EEeecCHH---HHhhhhhheecc---CCcc-HHHHHHHh----CCCEEEecCcccHHHHHHHHHHCCCEEEcCCCC--ch
Confidence 34667765 456889998853 3554 77999999 23556543332 22222 12466666544 46
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHHhcC
Q 002285 529 ASSIGYALNMPADEREKRHLHNFMHVTTHT 558 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 558 (942)
+++|.++|+++ +.+++.++..+.+...+
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~~ 386 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEMP 386 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcCC
Confidence 88999999864 33445555555554443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=85.36 E-value=0.24 Score=50.15 Aligned_cols=42 Identities=7% Similarity=-0.135 Sum_probs=33.2
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|+.+++.++++++ ++++.+++||| ..||..|.+.++-
T Consensus 143 ~~~Kp~~~~~~~~~~~lg------i~~~~~i~vGD-s~~Di~~a~~aG~ 184 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLD------VSPADCAAIED-AEAGISAIKSAGM 184 (233)
T ss_dssp ------CCHHHHHHHHHT------SCGGGEEEEEC-SHHHHHHHHHTTC
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHEEEEeC-CHHHHHHHHHcCC
Confidence 344556779999999998 67899999999 9999999999986
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=85.32 E-value=0.17 Score=53.55 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=29.3
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
.+-|.+.++|+.|.+ .|..++|+||.+...++..+..
T Consensus 136 ~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~ 172 (263)
T 2yj3_A 136 VPRPNLKDYLEKLKN-EGLKIIILSGDKEDKVKELSKE 172 (263)
Confidence 467889999999986 5899999999887766555444
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=84.91 E-value=0.36 Score=50.06 Aligned_cols=23 Identities=4% Similarity=0.270 Sum_probs=18.4
Q ss_pred ccceecCCHHHHHHHHHHhhhCc
Q 002285 917 NARYFLGSSGDVVTLLNELAECP 939 (942)
Q Consensus 917 ~A~y~l~~~~~V~~~L~~L~~~~ 939 (942)
.|.|.+++..|+..+|..+...+
T Consensus 241 ~ad~v~~~~~el~~~l~~~~~~~ 263 (267)
T 1swv_A 241 GAHFTIETMQELESVMEHIEKQE 263 (267)
T ss_dssp TCSEEESSGGGHHHHHHHHTC--
T ss_pred CCceeccCHHHHHHHHHHHhhhh
Confidence 48999999999999998876543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=84.38 E-value=0.18 Score=49.24 Aligned_cols=40 Identities=10% Similarity=-0.110 Sum_probs=34.3
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+..|+.+++.++++++ ++ .+++||| +.||.+|++.++-
T Consensus 134 ~~~kp~~~~~~~~~~~~~------~~--~~~~iGD-~~~Di~~a~~aG~ 173 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQ------IS--SGLVIGD-RPIDIEAGQAAGL 173 (190)
T ss_dssp CCCTTSCHHHHHHHHHTT------CS--SEEEEES-SHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHcC------CC--eEEEEcC-CHHHHHHHHHcCC
Confidence 345678999999999987 44 8999999 9999999999874
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=83.80 E-value=0.2 Score=49.12 Aligned_cols=26 Identities=8% Similarity=0.103 Sum_probs=19.1
Q ss_pred EEEeCCCCCccceecCCHHHHHHHHH
Q 002285 908 SCTVSRKRSNARYFLGSSGDVVTLLN 933 (942)
Q Consensus 908 t~~VG~~~s~A~y~l~~~~~V~~~L~ 933 (942)
+|.|+...+.|.|.+.+.+|+.++|+
T Consensus 180 ~i~~~~~~~~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 180 SINFLESTYEGNHRIQALADISRIFE 205 (207)
T ss_dssp EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred EEEEecCCCCCCEEeCCHHHHHHHHh
Confidence 46676532378899999999888763
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=83.53 E-value=1.3 Score=43.68 Aligned_cols=19 Identities=0% Similarity=0.043 Sum_probs=16.5
Q ss_pred ccceecCCHHHHHHHHHHh
Q 002285 917 NARYFLGSSGDVVTLLNEL 935 (942)
Q Consensus 917 ~A~y~l~~~~~V~~~L~~L 935 (942)
.|.|.+.+..|+..+|..+
T Consensus 182 ~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 182 KPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp CCSEEESSHHHHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHHhc
Confidence 5889999999999998765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=83.26 E-value=0.25 Score=50.99 Aligned_cols=38 Identities=16% Similarity=0.001 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+.+++.+++.++ ++++.+++||| +.||..|.+.++-
T Consensus 171 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~ 208 (243)
T 2hsz_A 171 PHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFAAHSAGC 208 (243)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHhC------cChhhEEEEcC-CHHHHHHHHHCCC
Confidence 36789999999998 56899999999 9999999999864
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.85 E-value=0.29 Score=49.20 Aligned_cols=20 Identities=20% Similarity=0.335 Sum_probs=17.8
Q ss_pred cceecCCHHHHHHHHHHhhh
Q 002285 918 ARYFLGSSGDVVTLLNELAE 937 (942)
Q Consensus 918 A~y~l~~~~~V~~~L~~L~~ 937 (942)
|.|.+.+.+|+.++|+.+..
T Consensus 205 ad~v~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 205 AETVISRMQDLPAVIAAMAE 224 (229)
T ss_dssp CSEEESCGGGHHHHHHHHTC
T ss_pred CceeecCHHHHHHHHHHhhh
Confidence 89999999999999988754
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=82.71 E-value=0.24 Score=49.90 Aligned_cols=20 Identities=5% Similarity=0.194 Sum_probs=17.0
Q ss_pred ccceecCCHHHHHHHHHHhh
Q 002285 917 NARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 917 ~A~y~l~~~~~V~~~L~~L~ 936 (942)
.|.|.+++..|+.++|+.+.
T Consensus 214 ~~~~~~~~~~el~~~l~~~~ 233 (235)
T 2om6_A 214 ERGFEIPSIANLKDVIELIS 233 (235)
T ss_dssp TTEEEESSGGGHHHHHHHTC
T ss_pred CCcchHhhHHHHHHHHHHHh
Confidence 37789999999999998764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=82.12 E-value=0.34 Score=49.56 Aligned_cols=19 Identities=11% Similarity=0.153 Sum_probs=17.5
Q ss_pred ccceecCCHHHHHHHHHHh
Q 002285 917 NARYFLGSSGDVVTLLNEL 935 (942)
Q Consensus 917 ~A~y~l~~~~~V~~~L~~L 935 (942)
.|.|.+.+..|+..+|+.|
T Consensus 223 ~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 223 GADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp TCSEEESCHHHHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHHhh
Confidence 5899999999999999887
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=82.00 E-value=0.39 Score=48.84 Aligned_cols=21 Identities=19% Similarity=0.140 Sum_probs=19.1
Q ss_pred ccceecCCHHHHHHHHHHhhh
Q 002285 917 NARYFLGSSGDVVTLLNELAE 937 (942)
Q Consensus 917 ~A~y~l~~~~~V~~~L~~L~~ 937 (942)
.|.|.+++.+|+..+|+.+.+
T Consensus 222 ~ad~v~~~~~el~~~l~~~~~ 242 (247)
T 3dv9_A 222 GANLLFHSMPDFNKNWETLQS 242 (247)
T ss_dssp TCSEEESSHHHHHHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHHHHHH
Confidence 689999999999999999865
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=81.36 E-value=0.3 Score=49.27 Aligned_cols=29 Identities=14% Similarity=0.164 Sum_probs=21.4
Q ss_pred EEEEeCCC------CCccceecCCHHHHHHHHHHh
Q 002285 907 FSCTVSRK------RSNARYFLGSSGDVVTLLNEL 935 (942)
Q Consensus 907 ~t~~VG~~------~s~A~y~l~~~~~V~~~L~~L 935 (942)
-+|.|+.+ ...|.|.+.+.+|+..+|...
T Consensus 199 ~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 233 (238)
T 3ed5_A 199 DTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIE 233 (238)
T ss_dssp EEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTCC
T ss_pred EEEEECCCCCCCcccCCCCeEECCHHHHHHHHHhh
Confidence 35666542 346899999999999998653
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=81.16 E-value=0.25 Score=50.71 Aligned_cols=18 Identities=11% Similarity=-0.014 Sum_probs=15.7
Q ss_pred CccceecCCHHHHHHHHH
Q 002285 916 SNARYFLGSSGDVVTLLN 933 (942)
Q Consensus 916 s~A~y~l~~~~~V~~~L~ 933 (942)
..|.|.+++..|+..+|.
T Consensus 234 ~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 234 QDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SCCSEEESSHHHHHHHHH
T ss_pred CCCcEEECCHHHHHHHhc
Confidence 468899999999999885
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=81.11 E-value=0.29 Score=49.47 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=13.4
Q ss_pred CEEEEEecCCccCCC
Q 002285 602 NRLLILGFNATLTAP 616 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~ 616 (942)
.++|+||+||||++.
T Consensus 2 ik~i~fDlDGTL~d~ 16 (233)
T 3nas_A 2 LKAVIFDLDGVITDT 16 (233)
T ss_dssp CCEEEECSBTTTBCH
T ss_pred CcEEEECCCCCcCCC
Confidence 478999999999985
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=81.11 E-value=0.31 Score=49.69 Aligned_cols=23 Identities=9% Similarity=-0.062 Sum_probs=18.2
Q ss_pred CCccceecCCHHHHHHHHHHhhh
Q 002285 915 RSNARYFLGSSGDVVTLLNELAE 937 (942)
Q Consensus 915 ~s~A~y~l~~~~~V~~~L~~L~~ 937 (942)
...|.|.+++..|+..+|.....
T Consensus 229 ~~~~d~~~~~~~el~~~l~~~~~ 251 (254)
T 3umg_A 229 TGSWDISATDITDLAAQLRAGST 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHHHCC-
T ss_pred cCCCceEECCHHHHHHHhcCCCC
Confidence 35688999999999999977543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=80.14 E-value=0.7 Score=52.76 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCC------ChhhHHHh
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGS------DRNVLDDN 667 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR------~~~~L~~~ 667 (942)
.+.|.+.++|+.|.+ .|.+++|+|+. ....+...
T Consensus 100 ~~~~~~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 100 KINRPMLQAALMLRK-KGFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEECCCCCCSTTHHHHHHH
T ss_pred CcChhHHHHHHHHHH-CCCEEEEEeCCCccccchhhHHHHH
Confidence 466788999999997 58999999997 55555543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.03 E-value=0.37 Score=49.52 Aligned_cols=20 Identities=30% Similarity=0.215 Sum_probs=15.9
Q ss_pred CccceecCCHHHHHHHHHHh
Q 002285 916 SNARYFLGSSGDVVTLLNEL 935 (942)
Q Consensus 916 s~A~y~l~~~~~V~~~L~~L 935 (942)
..|.|.+.+.+|+..+|..|
T Consensus 227 ~~ad~v~~sl~el~~~l~~l 246 (250)
T 3l5k_A 227 TKATLVLNSLQDFQPELFGL 246 (250)
T ss_dssp TTSSEECSCGGGCCGGGGTC
T ss_pred ccccEeecCHHHhhHHHhcC
Confidence 57899999999987776554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 942 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-132 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 2e-05 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 402 bits (1034), Expect = e-132
Identities = 154/472 (32%), Positives = 237/472 (50%), Gaps = 22/472 (4%)
Query: 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQK 164
RL+VV+NR+ S GGL +LG + W GW+G ++ Q
Sbjct: 2 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNED--QP 51
Query: 165 ALTKALAEKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDA 224
L E+ + +YYN + N +LWP FHY RL + + +D
Sbjct: 52 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 104
Query: 225 YKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR 284
Y R N + A + + ++ D++W HDYHL+ L++ N ++G+FLH PFP+ EI
Sbjct: 105 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 164
Query: 285 TLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVED-QGRLTRVAAFP 343
LP+ LL + DL+GF T + F+ + + + G+ R +P
Sbjct: 165 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 224
Query: 344 IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 403
IGI+ + P + + +LK + + V+RLD KG+P++ LA+E LE+
Sbjct: 225 IGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 283
Query: 404 PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463
P K+ QIA +R DV YQ + Q+ GRING+YG L P+++L++ D
Sbjct: 284 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 343
Query: 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQA-SKKGVLILSEFAGAAQSLGAGAILVNP 522
L ++ +DV LVT LRDGMNLV+ E+VA Q + GVL+LS+FAGAA L A++VNP
Sbjct: 344 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 402
Query: 523 WNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTI 574
++ EVA+++ AL M ER RH + + W F+S+L +
Sbjct: 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 45.8 bits (107), Expect = 2e-05
Identities = 49/364 (13%), Positives = 92/364 (25%), Gaps = 59/364 (16%)
Query: 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE-YNNNMKVGWFLHTPFPS 279
+F A A V D+V HD+ P ++ + +H
Sbjct: 110 RFAALSLAAARIGAGVLP-GWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 280 SEIHRTLPSRTELLRSVLAAD----------LVGFHTYDYARHFVSACTR---ILGLEGT 326
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 327 PEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRK----------- 375
R + GID+D + A + ++ + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 376 ----VMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTS 431
+ + RL KGI A ++ + L
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL-------------VVLGAGDVALEG 335
Query: 432 QVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFV 491
+ R +GR G + A D ++ S + L +
Sbjct: 336 ALLAAASRHHGRVGVAIGYNEPLSHL---------MQAGCDAIIIPSRFEPCGLTQLYAL 386
Query: 492 ACQ----ASKKGVL---ILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADERE 544
++ G L ++ A S A + +P + + +I + D +
Sbjct: 387 RYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKL 446
Query: 545 KRHL 548
+
Sbjct: 447 WTQM 450
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 942 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.97 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.93 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.87 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.86 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.85 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.82 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.81 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.81 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.81 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.79 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.79 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.77 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.76 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.73 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.72 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.71 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.68 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.65 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.73 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.77 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 97.62 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.57 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.49 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 97.4 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.33 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.0 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.9 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 96.67 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.66 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 96.55 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 96.31 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.1 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.99 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 95.43 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.03 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 94.83 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.69 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 94.38 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 94.3 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 93.63 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.42 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 91.63 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 89.97 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.11 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 89.05 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 88.6 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 88.42 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 88.29 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 87.97 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 87.76 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 85.79 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 85.41 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 84.3 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 82.29 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 82.24 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 80.61 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-93 Score=832.14 Aligned_cols=449 Identities=34% Similarity=0.625 Sum_probs=410.6
Q ss_pred CeEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChH
Q 002285 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEE 183 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~~~ 183 (942)
+||||||||+|+...+ ..++|||++||.++ +..+|+||||+|...++++. .......+++|.||+|+++
T Consensus 1 srlivvsnr~~~~~~~--------~~~~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~~ 70 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEH--------AASAGGLAVGILGALKAAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSEQ 70 (456)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCCCC--------CCCCccHHHHhHHHHhhCCCEEEecCCCCCcccch--hhhhhccCceeEEecCCHH
Confidence 5899999999998654 24799999999998 77899999999976554322 1222346799999999999
Q ss_pred HHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHh
Q 002285 184 TVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE 262 (942)
Q Consensus 184 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~ 262 (942)
++++||+||||++|||+|||+.... .|++ +|++|+++|+.||++|++.++++|+||||||||+++|.+||+
T Consensus 71 ~~~~~Y~gf~n~~LWpl~H~~~~~~--------~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 71 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhccccccccCccccc--------cccHHHHHHHHHHHHHHHHHHHHhccCCCeEEEeccchhhhHHHHHH
Confidence 9999999999999999999984322 3554 499999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccC-CCceecCCeeeEEEE
Q 002285 263 YNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGT-PEGVEDQGRLTRVAA 341 (942)
Q Consensus 263 ~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~-~~~i~~~gr~~~v~v 341 (942)
+.|+++|+||+|+|||++++|+++|++++|+++|+++|+||||++.|++||+.+|.++++.+.. ...+.+.|+.+++.+
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~ 222 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 222 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeee
Confidence 9999999999999999999999999999999999999999999999999999999999987653 456788999999999
Q ss_pred eeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCC
Q 002285 342 FPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRT 421 (942)
Q Consensus 342 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrg 421 (942)
+|+|||++.|......+ +.+.+.++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|+++
T Consensus 223 ~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~ 301 (456)
T d1uqta_ 223 YPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 301 (456)
T ss_dssp CCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred ecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCccc
Confidence 99999999998765443 34566778888899999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhcc-CCCce
Q 002285 422 DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA-SKKGV 500 (942)
Q Consensus 422 d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~-~~~G~ 500 (942)
+.++|.+++.++.+++++||+++++.+|.|++++.+.++++++.++|+.|||+++||++||||||++|||||+. .++|+
T Consensus 302 ~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~ 381 (456)
T d1uqta_ 302 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 381 (456)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985 36789
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 501 LILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 501 lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
||+|+++|+++++ .+|++|||+|++++|+||.++|+||++||++|+++++++|.+||+++|+++||.+|+++
T Consensus 382 lIlS~~~G~~~~l-~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 382 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEeCCCCCHHHh-CCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 9999999999999 67999999999999999999999999999999999999999999999999999999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=3.8e-30 Score=265.73 Aligned_cols=221 Identities=14% Similarity=0.178 Sum_probs=179.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFL 683 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~i 683 (942)
|||||+||||++...+| +...++++++++|++|++ ++.|+|+|||+...|+..+.. ..+++++||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL-DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTEE
T ss_pred EEEEEecCCCCCCCCCh---------hhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc-cccEEecCeEEE
Confidence 89999999999987777 577899999999999986 688999999999999887754 568999999999
Q ss_pred EeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeE
Q 002285 684 RLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVD 763 (942)
Q Consensus 684 r~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~ 763 (942)
...+..+.... ......|.+.+.+.+..+....+|...+.+...+.+++....+.........+...+ ....+.
T Consensus 70 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 143 (229)
T d1u02a_ 70 KINGQIVYNNG-SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIA-----RIFGVE 143 (229)
T ss_dssp EETTEEEECTT-GGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHH-----HHHTCE
T ss_pred ecCCceeeecc-hhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHh-----hcCCeE
Confidence 87655543322 234456677788888888888999999999999999998765433322222222222 223577
Q ss_pred EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccccc
Q 002285 764 VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHLRR 843 (942)
Q Consensus 764 v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (942)
+..|..++||.|+|+|||.|+++|+++ ++++|||| +.||++||++++.
T Consensus 144 ~~~~~~~idi~p~g~~Kg~al~~l~~~-----------~~~i~~GD-s~ND~~Mf~~~~~-------------------- 191 (229)
T d1u02a_ 144 TYYGKMIIELRVPGVNKGSAIRSVRGE-----------RPAIIAGD-DATDEAAFEANDD-------------------- 191 (229)
T ss_dssp EEECSSEEEEECTTCCHHHHHHHHHTT-----------SCEEEEES-SHHHHHHHHTTTT--------------------
T ss_pred EEeeceEEEEecCCCCHHHHHHHHhcc-----------ccceeecC-CCChHHHHhccCC--------------------
Confidence 889999999999999999999999753 56899999 9999999999843
Q ss_pred cccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCccceecC
Q 002285 844 SSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLG 923 (942)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~ 923 (942)
+|+|+||.++|.|+|++.
T Consensus 192 --------------------------------------------------------------~~av~~g~~~~~A~~~~~ 209 (229)
T d1u02a_ 192 --------------------------------------------------------------ALTIKVGEGETHAKFHVA 209 (229)
T ss_dssp --------------------------------------------------------------SEEEEESSSCCCCSEEES
T ss_pred --------------------------------------------------------------eEEEEeCCCCccCeEEcC
Confidence 589999999999999999
Q ss_pred CHHHHHHHHHHhh
Q 002285 924 SSGDVVTLLNELA 936 (942)
Q Consensus 924 ~~~~V~~~L~~L~ 936 (942)
+++||+.||+.|.
T Consensus 210 ~~~ev~~~l~~l~ 222 (229)
T d1u02a_ 210 DYIEMRKILKFIE 222 (229)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999999884
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=1.9e-24 Score=249.56 Aligned_cols=320 Identities=16% Similarity=0.201 Sum_probs=216.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC--CCCEEEEcCCchhhHHHHHH-hhCCCCeEEEEeccCCCC----hhHhhcCC--c
Q 002285 218 FQSQFDAYKRANQMFAKVVNNIYE--EGDVVWCHDYHLMFLPQCLK-EYNNNMKVGWFLHTPFPS----SEIHRTLP--S 288 (942)
Q Consensus 218 ~~~~w~~Y~~vN~~fa~~i~~~~~--~~DiIwvHDyhL~llp~~Lr-~~~p~~~I~~flH~PfP~----~e~fr~lp--~ 288 (942)
|.+.|..|...++.+++.+..... ++||||+||+|..+.+.+++ .+.+++++++++|..... ...+..+. +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 444588888888888877666554 67999999999988888886 455679999999975211 11221111 0
Q ss_pred -------------hHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhc
Q 002285 289 -------------RTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRAL 355 (942)
Q Consensus 289 -------------r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~ 355 (942)
...+..++..+|.+..-+..|++..+..- .+... ..+ ...+..++.++|||||.+.|.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~---~~~~~--~~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAE---FGMGL--EGV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHH---HHTTC--HHH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHh---cCcch--hhh-hhhccccEEEEECCcchhhccccc
Confidence 01233456778998888887777654321 11100 000 122456788999999998886532
Q ss_pred CC-----------hhhHHHHHHHHHHh----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 356 EL-----------PQVQDHINELKERF----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 356 ~~-----------~~~~~~~~~lr~~~----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
.. .........++..+ ++.++|+++||+++.||++.+|+|++++++.++. ++++ |.
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~----l~~~--G~--- 328 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR----LVVL--GA--- 328 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE----EEEE--EC---
T ss_pred cccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe----EEEE--ec---
Confidence 10 01112223344333 2467999999999999999999999999887533 3333 31
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCce
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGV 500 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~ 500 (942)
|+.. ...++.++..+++.+ |.+ .+..+.+++..+|+.||+||+||.+||||+|++||||| +.|
T Consensus 329 G~~~----~~~~~~~~~~~~~~~--------v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~----G~P 391 (477)
T d1rzua_ 329 GDVA----LEGALLAAASRHHGR--------VGV-AIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY----GCI 391 (477)
T ss_dssp BCHH----HHHHHHHHHHHTTTT--------EEE-EESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH----TCE
T ss_pred CCch----HHHHHHHHHhhcCCe--------EEE-EcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc----CCC
Confidence 2222 233344444444322 443 35667889999999999999999999999999999999 358
Q ss_pred EEEeCCCCccccc--C---------CceEEECCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhHHHHhcCHHHHHHHHH
Q 002285 501 LILSEFAGAAQSL--G---------AGAILVNPWNITEVASSIGYALN--MPADEREKRHLHNFMHVTTHTSQEWAATFV 567 (942)
Q Consensus 501 lIlSe~~G~~~~l--g---------~~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 567 (942)
+|+|+.+|..+.+ | .+|++|+|.|++++|++|.++|+ ..++.++++.+++.+ +.++++.-+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHH
Confidence 9999999999887 3 37999999999999999999886 245555555554432 3588888787776
Q ss_pred HHHH
Q 002285 568 SELN 571 (942)
Q Consensus 568 ~~L~ 571 (942)
+--+
T Consensus 470 ~lY~ 473 (477)
T d1rzua_ 470 ALYS 473 (477)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.93 E-value=3.7e-24 Score=241.46 Aligned_cols=304 Identities=18% Similarity=0.187 Sum_probs=216.9
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh---hHhhc--C------CchHHHHHHhhh
Q 002285 230 QMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS---EIHRT--L------PSRTELLRSVLA 298 (942)
Q Consensus 230 ~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~---e~fr~--l------p~r~~il~~ll~ 298 (942)
......+.+....+|+||+|+++..+++.++++. .++++.+++|..++.. ..+.. + +...........
T Consensus 108 ~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (437)
T d2bisa1 108 VLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYI 186 (437)
T ss_dssp HHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHh
Confidence 3344444444446799999999988777777655 4788999999877531 11111 1 111122334556
Q ss_pred ccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCce
Q 002285 299 ADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKV 376 (942)
Q Consensus 299 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~i 376 (942)
+|.+...+..++..... .+ .....++.++|+|+|++.|.+....+........+++++ .++++
T Consensus 187 ~d~v~~~~~~~~~~~~~----~~-----------~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (437)
T d2bisa1 187 ADIVTTVSRGYLIDEWG----FF-----------RNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVT 251 (437)
T ss_dssp SSEEEESCHHHHHHTHH----HH-----------GGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEE
T ss_pred hhhhcccchhhhhhhhh----hh-----------ccccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCce
Confidence 88887777654433221 11 112346789999999999887654444344445566665 46789
Q ss_pred EEEeecccc-cCCHHHHHHHHHHhHHh--CCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 377 MLGVDRLDM-IKGIPQKILAFEKFLEE--NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 377 Il~VgRLd~-~KGi~~lL~Af~~ll~~--~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
|+++||++. .||+..+++|+..+..+ .|+ +.|+++| +++.. ....++.+.... + .+.
T Consensus 252 i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G-----~~~~~--~~~~~~~~~~~~----~-----~~~ 311 (437)
T d2bisa1 252 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIG-----KGDPE--LEGWARSLEEKH----G-----NVK 311 (437)
T ss_dssp EEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEEC-----CBCHH--HHHHHHHHHHTC----T-----TEE
T ss_pred EEEeecccccchhHHHHHhhhccccccccccc----ceeeeec-----ccccc--cccchhhhcccc----c-----cce
Confidence 999999975 69999999999998653 355 5566553 33321 122233332221 1 245
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHH
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSI 532 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI 532 (942)
++.+.++.+++..+|+.||++++||..||+|++++||||| +.|+|+|+.+|..+.+ +.+|++|+|.|++++|++|
T Consensus 312 ~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~----G~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i 387 (437)
T d2bisa1 312 VITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL----GAIPIASAVGGLRDIITNETGILVKAGDPGELANAI 387 (437)
T ss_dssp EECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTT----TCEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHH
T ss_pred eccccCcHHHHHHHHhhhccccccccccccchHHHHHHHC----CCCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHHH
Confidence 6788899999999999999999999999999999999999 3578889988888777 5689999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 533 GYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 533 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
.++|+++++.++++.+++++.+++|+++++++++++-.+++
T Consensus 388 ~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 388 LKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99998777777788888888999999999999998765543
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.87 E-value=1.2e-21 Score=199.37 Aligned_cols=191 Identities=19% Similarity=0.233 Sum_probs=148.9
Q ss_pred ccCccccchhcCChhhHHHHHHHHHHh--cCCceEEEeeccc-ccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCC
Q 002285 345 GIDSDRFVRALELPQVQDHINELKERF--AGRKVMLGVDRLD-MIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRT 421 (942)
Q Consensus 345 GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd-~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrg 421 (942)
|||++.|.+........+....+++++ +++++|+++||++ ++||++.+|+|++.|.++.+.. ++.|+.+|
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G----- 73 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIG----- 73 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEEC-----
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC--CeEEEEEe-----
Confidence 899999987765555566777788887 5788999999997 5899999999999997543221 25566664
Q ss_pred Ch-hHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCce
Q 002285 422 DV-PEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGV 500 (942)
Q Consensus 422 d~-~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~ 500 (942)
++ +.++.+ ++.+...+ . .++++.+.++.+++..+|+.||++|+||..||+|++++|||+| +.|
T Consensus 74 ~g~~~~~~~---~~~~~~~~----~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~----G~p 137 (196)
T d2bfwa1 74 KGDPELEGW---ARSLEEKH----G-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL----GAI 137 (196)
T ss_dssp CBCHHHHHH---HHHHHHHC----T-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT----TCE
T ss_pred ecccchhhh---hhhhhhcc----c-----eeEEeeeccccccchhccccccccccccccccccccchhhhhc----Cce
Confidence 33 334333 33333322 1 2456788899999999999999999999999999999999999 357
Q ss_pred EEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcC
Q 002285 501 LILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHT 558 (942)
Q Consensus 501 lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 558 (942)
+|+|..+|..+.+ +.+|++++|.|+++++++|.++|.+..+.+.++.+.+++++++|+
T Consensus 138 vI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 138 PIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp EEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred eeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 8888887877766 568999999999999999999999887777777677777776553
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=3e-21 Score=210.56 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=154.6
Q ss_pred eeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEE
Q 002285 335 RLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVV 411 (942)
Q Consensus 335 r~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vv 411 (942)
...++.++|+|||++.+.+... +. ..+.+|+.+ .++++|+++||+.+.||++.+|+|++++.+++|+..
T Consensus 157 ~~~~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~---- 228 (370)
T d2iw1a1 157 EPERFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT---- 228 (370)
T ss_dssp CGGGEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----
T ss_pred CcceEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----
Confidence 3456889999999987765432 21 223445554 478899999999999999999999999988877643
Q ss_pred EEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHH
Q 002285 412 LIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFV 491 (942)
Q Consensus 412 Lvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEam 491 (942)
++.++.. +.+ +++++++.+++.. ..++++. . .+++..+|+.||++|+||..||||++++|||
T Consensus 229 ~~ii~g~---~~~------~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAm 290 (370)
T d2iw1a1 229 LLFVVGQ---DKP------RKFEALAEKLGVR------SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAI 290 (370)
T ss_dssp EEEEESS---SCC------HHHHHHHHHHTCG------GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHH
T ss_pred eeecccc---ccc------ccccccccccccc------ccccccc-c--ccccccccccccccccccccccccceeeecc
Confidence 3334422 111 1234444444332 1355543 3 4679999999999999999999999999999
Q ss_pred hhccCCCceEEEeCCCCccccc--CCceEEE-CCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHH
Q 002285 492 ACQASKKGVLILSEFAGAAQSL--GAGAILV-NPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVS 568 (942)
Q Consensus 492 A~~~~~~G~lIlSe~~G~~~~l--g~~gllV-nP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 568 (942)
|| +.|+|+|+.+|..+.+ |.+|+++ +|.|++++|++|.++|++ ++.|+++.+++++++++++...|.+...+
T Consensus 291 a~----G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ 365 (370)
T d2iw1a1 291 TA----GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAAD 365 (370)
T ss_dssp HH----TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred cC----CeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 99 3579999999998887 5677655 789999999999999985 45677777889999999999999877655
Q ss_pred HH
Q 002285 569 EL 570 (942)
Q Consensus 569 ~L 570 (942)
-+
T Consensus 366 ii 367 (370)
T d2iw1a1 366 II 367 (370)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=7.9e-21 Score=201.64 Aligned_cols=189 Identities=16% Similarity=0.204 Sum_probs=124.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc--CceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--NMWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~l~liaeh 679 (942)
.||||+|+||||++. ....++++++++|++|.+ .|+.|+++|||+...+.+++..+ ..+++++|
T Consensus 2 IKli~~DlDGTLl~~-------------~~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (269)
T d1rlma_ 2 VKVIVTDMDGTFLND-------------AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAEN 67 (269)
T ss_dssp CCEEEECCCCCCSCT-------------TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGG
T ss_pred EEEEEEeCCccCcCC-------------CCcCChHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccceEeec
Confidence 479999999999975 223345789999999998 59999999999999999999887 46999999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC---------CCeeeeeecc-----------------------
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT---------PRSHFEVRET----------------------- 727 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~---------~Gs~iE~K~~----------------------- 727 (942)
|+.+...++..... ... .+.....+..+.... .+.++.....
T Consensus 68 Ga~i~~~~~~~~~~---~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (269)
T d1rlma_ 68 GALVYEHGKQLFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEI 141 (269)
T ss_dssp GTEEEETTEEEEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGC
T ss_pred eeEEEECCcEEEEe---ccc---hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhh
Confidence 99998755432111 111 223333333333221 1112211000
Q ss_pred -eEEEEEe-ccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEE
Q 002285 728 -SLVWNYK-YADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVL 805 (942)
Q Consensus 728 -sl~~hyr-~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 805 (942)
...+.+. ...++ +..++.+++ ..........+..+..++||.|+++|||.|+++|+++++ ++.+.++
T Consensus 142 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lg------i~~~~vi 210 (269)
T d1rlma_ 142 DDVLFKFSLNLPDE----QIPLVIDKL-HVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQNVV 210 (269)
T ss_dssp CSCEEEEEEECCGG----GHHHHHHHH-HHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred cchheEEEecCCHH----HHHHHHHHH-HHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhc------cccccEE
Confidence 0000000 01111 223344444 211122123345578999999999999999999999998 6789999
Q ss_pred EEeCCCCCCHHHHHhcC
Q 002285 806 CIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 806 ~iGD~d~nDEdMF~~~~ 822 (942)
+||| +.||++||+.++
T Consensus 211 ~~GD-~~ND~~Ml~~ag 226 (269)
T d1rlma_ 211 AIGD-SGNDAEMLKMAR 226 (269)
T ss_dssp EEEC-SGGGHHHHHHCS
T ss_pred EEcC-CcchHHHHHhCC
Confidence 9999 999999999874
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.82 E-value=7.3e-20 Score=194.54 Aligned_cols=191 Identities=15% Similarity=0.163 Sum_probs=122.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc---CceEEee
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY---NMWLAAE 678 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~l~liae 678 (942)
.||||+|+||||++. ...++++++++|++|++ ++.++++|||++..+.+.+..+ +.++|++
T Consensus 2 ~Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~ 65 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (267)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred eEEEEEeCCccccCC--------------cCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceecc
Confidence 379999999999975 45689999999999985 5689999999999988887765 4579999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEE---------------EEEeccc--hHH-
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV---------------WNYKYAD--LEF- 740 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~---------------~hyr~ad--~e~- 740 (942)
||+.+...++.- +.....+. +.+.++++...+......+...+.... ..++..+ .+.
T Consensus 66 nGa~i~~~~~~~--i~~~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T d1nf2a_ 66 NGAIVYLPEEGV--ILNEKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELV 140 (267)
T ss_dssp GGTEEEETTTEE--EEECCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHH
T ss_pred CCeEEEeccccc--ccccCCCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHh
Confidence 999998644331 11112332 334444443333221111111110000 0000000 000
Q ss_pred ------------hHHHHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEE
Q 002285 741 ------------GRLQARDILQHLWSGPISNASVD-VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCI 807 (942)
Q Consensus 741 ------------~~~qa~el~~~L~~~~~~~~~v~-v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 807 (942)
...+..++.+.+ .+.+.. .+. +..+..++||.|+++|||.||+.|+++++ ++.+.+++|
T Consensus 141 ~~~~~~~i~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~------i~~~~vva~ 212 (267)
T d1nf2a_ 141 SKMGTTKLLLIDTPERLDELKEIL-SERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVVF 212 (267)
T ss_dssp HHHCBSEEEEECCHHHHHHHHHHH-HHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEEE
T ss_pred hhccceEEEEeccHHHHHHHHHHH-HHhhCC-cEEEEEeecceeeecCCCCchhHHHHHHHHhhc------cCcccEEEE
Confidence 011223333333 211111 244 45578999999999999999999999998 678899999
Q ss_pred eCCCCCCHHHHHhcC
Q 002285 808 GHFLQKDEDIYTFFE 822 (942)
Q Consensus 808 GD~d~nDEdMF~~~~ 822 (942)
|| +.||.+||+.++
T Consensus 213 GD-~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 213 GD-NENDLFMFEEAG 226 (267)
T ss_dssp EC-SHHHHHHHTTCS
T ss_pred cC-CcchHHHHHhCC
Confidence 99 999999998773
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=5.3e-20 Score=195.17 Aligned_cols=193 Identities=12% Similarity=0.176 Sum_probs=123.9
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC-----ceE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN-----MWL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~-----l~l 675 (942)
..|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+++..++ .++
T Consensus 3 ~iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~-~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~ 67 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYC 67 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEE
T ss_pred CeeEEEEeCCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhcCcCCCcEE
Confidence 4789999999999975 45689999999999998 599999999999999998887753 468
Q ss_pred EeecceEEEeC-CCceeecccCCCChhHHHHHHHHHHHHHhc-----CCCeeeeeecc----------------------
Q 002285 676 AAENGMFLRLT-TGEWMTTMPENLNMDWVDSVKHVFEYFTER-----TPRSHFEVRET---------------------- 727 (942)
Q Consensus 676 iaehG~~ir~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~r-----~~Gs~iE~K~~---------------------- 727 (942)
+++||+.+... ++..... ..........+..+.+..... ..+.+...+..
T Consensus 68 i~~nGa~i~~~~~~~~i~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T d1rkqa_ 68 ITYNGALVQKAADGSTVAQ--TALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEK 145 (271)
T ss_dssp EEGGGTEEEETTTCCEEEE--CCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGG
T ss_pred EEcCceeEeccCCCeEEEe--ecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhh
Confidence 99999998743 3332111 112323333333333332110 00001100000
Q ss_pred -----eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCC
Q 002285 728 -----SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVD-VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPI 801 (942)
Q Consensus 728 -----sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~-v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 801 (942)
.+....-..+++ ...+..+.+ ...+. ..+. +..|..++||.|+++|||.||+.|+++++ ++.
T Consensus 146 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~-~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~------i~~ 213 (271)
T d1rkqa_ 146 MDPNTQFLKVMMIDEPA----ILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKP 213 (271)
T ss_dssp SCTTCCBCEEEEECCHH----HHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCG
T ss_pred cCcccceEEEEEecCHH----HHHHHHHHH-HHHhh-cceEEEEecCceEEecCCCCCcccccceehhhcc------cch
Confidence 000000001121 112233333 11111 1233 45688999999999999999999999998 567
Q ss_pred ceEEEEeCCCCCCHHHHHhcCc
Q 002285 802 DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 802 d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.++|||| +.||++||++++.
T Consensus 214 ~~ii~~GD-~~ND~~ml~~~~~ 234 (271)
T d1rkqa_ 214 EEIMAIGD-QENDIAMIEYAGV 234 (271)
T ss_dssp GGEEEEEC-SGGGHHHHHHSSE
T ss_pred hcEEEEeC-cHhHHHHHHhCCc
Confidence 89999999 9999999999965
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.81 E-value=9e-19 Score=186.79 Aligned_cols=187 Identities=13% Similarity=0.244 Sum_probs=124.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENG 680 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG 680 (942)
||||+|+||||++. +..++++++++|++|.+ .|+.|+++|||++..+.+++..++ .++|++||
T Consensus 2 Kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG 66 (285)
T d1nrwa_ 2 KLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANG 66 (285)
T ss_dssp CEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGG
T ss_pred eEEEEECCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCc
Confidence 79999999999975 45689999999999998 599999999999999999999884 58999999
Q ss_pred eEEEeCCCc-eeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceE------------------------------
Q 002285 681 MFLRLTTGE-WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSL------------------------------ 729 (942)
Q Consensus 681 ~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl------------------------------ 729 (942)
+.+...++. +.. ...+ .+.+.++++.+........+.......
T Consensus 67 ~~i~~~~~~~i~~---~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (285)
T d1nrwa_ 67 AVIHDPEGRLYHH---ETID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQ 140 (285)
T ss_dssp TEEECTTCCEEEE---CCCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred eeEEecCCceeee---ccCC---HHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhh
Confidence 999864333 221 1123 233444444433221111111111000
Q ss_pred ----------------------------EEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCH
Q 002285 730 ----------------------------VWNYKYADLEFGRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTK 780 (942)
Q Consensus 730 ----------------------------~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnK 780 (942)
.+....... . ..+.......+ .....+.++ .|..++||.|+++||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~~~s~~~~ldi~~~~~~K 214 (285)
T d1nrwa_ 141 AAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF-F-KEKLEAGWKRY----EHAEDLTLVSSAEHNFELSSRKASK 214 (285)
T ss_dssp HHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECS-C-HHHHHHHHHHH----TTCTTEEEECSSTTEEEEEETTCSH
T ss_pred hhhhhhccccceeechHHHHhhcccchhheeeecccc-h-HHHHHHHHHHh----hcCCCeEEEEeCCcEEEEecccchh
Confidence 000000000 0 00011111111 112345554 468899999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|.|+++++++++ ++.+.+++||| +.||.+||++++.
T Consensus 215 ~~ai~~l~~~~g------i~~~~vi~~GD-~~ND~~Ml~~a~~ 250 (285)
T d1nrwa_ 215 GQALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAGK 250 (285)
T ss_dssp HHHHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSSE
T ss_pred hhHHHHHHhhcc------cCcccEEEEeC-CHHHHHHHHhCCe
Confidence 999999999998 67899999999 9999999999854
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.81 E-value=3.2e-19 Score=183.31 Aligned_cols=186 Identities=16% Similarity=0.252 Sum_probs=128.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc--CceEEee
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--NMWLAAE 678 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~l~liae 678 (942)
|.|+|+||+||||++. ...++++++++|++|.+ .|..|+++|||+...++..+..+ +.+++++
T Consensus 1 kiK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~ 65 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65 (230)
T ss_dssp CCCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred CceEEEEecCCCCcCC--------------CCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccc
Confidence 4589999999999975 45689999999999987 59999999999999999888766 5679999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCC
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPIS 758 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~ 758 (942)
||+.+......- .. ......+. ...++...+...........+...+.++-...+.+ ..+++.+++
T Consensus 66 ~g~~~~~~~~~~--~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 131 (230)
T d1wr8a_ 66 DGGAISYKKKRI--FL-ASMDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL------ 131 (230)
T ss_dssp GGTEEEETTEEE--ES-CCCSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT------
T ss_pred cceeeecccccc--cc-ccccHHHH-HHHHHHHhcccccceeecccceeeEEEecccccHH----HHHHHHHHh------
Confidence 999987543221 11 11222221 22222222221111111223333333221111222 235555555
Q ss_pred CCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 759 NASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 759 ~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
...+....+...+||.|.+++||.|++.++++++ ++++.+++||| +.||++||+.++
T Consensus 132 ~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~------i~~~~~~~iGD-~~NDi~ml~~ag 188 (230)
T d1wr8a_ 132 NLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVG 188 (230)
T ss_dssp TCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred ccceEEeeCCcEEEEeeCCcCcchhhcccccccc------cchhheeeeec-CccHHHHHHHCC
Confidence 2345667788899999999999999999999998 56789999999 999999999884
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.79 E-value=3.9e-19 Score=188.11 Aligned_cols=191 Identities=13% Similarity=0.119 Sum_probs=121.1
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc--c--CceEEee
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE--Y--NMWLAAE 678 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~--~--~l~liae 678 (942)
|+||||+||||++. +...++++++++|++|.+ .|..|+++|||++..++.++.. . ..++|++
T Consensus 2 k~if~DlDGTL~~~-------------~~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~ 67 (260)
T d2rbka1 2 KALFFDIDGTLVSF-------------ETHRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYITM 67 (260)
T ss_dssp CEEEECSBTTTBCT-------------TTSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEG
T ss_pred eEEEEECCCCCcCC-------------CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHhcCCCCceEec
Confidence 78999999999976 345689999999999998 5999999999999988755432 2 3479999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeee-eeecceEEE-------------EEec---cch-HH
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHF-EVRETSLVW-------------NYKY---ADL-EF 740 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i-E~K~~sl~~-------------hyr~---ad~-e~ 740 (942)
||+++..+++.... ...+.+....+.++++.. .....+ +........ |... .+. +.
T Consensus 68 nGa~i~~~~~~i~~---~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (260)
T d2rbka1 68 NGAYCFVGEEVIYK---SAIPQEEVKAMAAFCEKK---GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEA 141 (260)
T ss_dssp GGTEEEETTEEEEE---CCCCHHHHHHHHHHHHHH---TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHH
T ss_pred CCcccccCcccccc---cCCCHHHHHHHHHHHHHc---CCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHh
Confidence 99999876543221 123333333333333332 222221 211111000 0000 000 00
Q ss_pred hH--------HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 741 GR--------LQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 741 ~~--------~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
.. ....+....+...+ ..+.+.. +..++||.|+++|||.|+++|+++++ ++.+.+++||| +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~------i~~~~~~a~GD-~ 211 (260)
T d2rbka1 142 SNKEVIQMTPFITEEEEKEVLPSI---PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD-G 211 (260)
T ss_dssp HTSCCSEEEECCCHHHHHHHGGGS---TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC-S
T ss_pred cCcceEEEeecCCHHHHHHHHHHh---ccccceeecCcEEEEEeCCCCHHHHHHHHHHhcc------ccHhheeEecC-C
Confidence 00 00011112220111 2345554 56789999999999999999999998 67899999999 9
Q ss_pred CCCHHHHHhcCc
Q 002285 812 QKDEDIYTFFEP 823 (942)
Q Consensus 812 ~nDEdMF~~~~~ 823 (942)
.||.+||+.++.
T Consensus 212 ~ND~~Ml~~a~~ 223 (260)
T d2rbka1 212 GNDISMLRHAAI 223 (260)
T ss_dssp GGGHHHHHHSSE
T ss_pred cccHHHHHhCCe
Confidence 999999999854
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.79 E-value=3.7e-19 Score=188.94 Aligned_cols=201 Identities=19% Similarity=0.243 Sum_probs=128.3
Q ss_pred hhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc---
Q 002285 595 DSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--- 671 (942)
Q Consensus 595 ~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--- 671 (942)
++++.++.||||+|+||||+.. ....++++++++|++|.+ .|+.|+|+|||++..+...++.+
T Consensus 3 ~~~~~~~ikli~~DlDGTLl~~-------------~~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~~ 68 (283)
T d2b30a1 3 EALKGADIKLLLIDFDGTLFVD-------------KDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLK 68 (283)
T ss_dssp HHTTTCCCCEEEEETBTTTBCC-------------TTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred ccCcccCccEEEEECCCCCcCC-------------CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence 5678889999999999999854 245689999999999987 59999999999999999888764
Q ss_pred -----CceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCC--CeeeeeecceEEEEEec--cc-----
Q 002285 672 -----NMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTP--RSHFEVRETSLVWNYKY--AD----- 737 (942)
Q Consensus 672 -----~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~--Gs~iE~K~~sl~~hyr~--ad----- 737 (942)
..+.|+.||+.+....+.- ......+. ..+.++++.+..... ..++....... +.... .+
T Consensus 69 ~~~~~~~~~i~~~g~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 142 (283)
T d2b30a1 69 KMNFYGMPGVYINGTIVYDQIGYT--LLDETIET---DVYAELISYLVEKNLVNQTIFHRGESNY-VTEDNKYADFLQKM 142 (283)
T ss_dssp HHTCCSCSEEEGGGTEEECTTCCE--EEECCCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEE-EETTCTTTTHHHHH
T ss_pred cccccCCceEEEeeeEEEcCCCcE--eeecccCH---HHHHHHHHHHHhhcccceEEEEecceeE-EeccchHHHHHHHH
Confidence 2357899999988543321 11011232 233334433322111 11111111100 00000 00
Q ss_pred -----------hHHh-------------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcc
Q 002285 738 -----------LEFG-------------RLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVR 793 (942)
Q Consensus 738 -----------~e~~-------------~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~ 793 (942)
.+.. ....+++.+.+ ...+......+..+..++||.|++++||.|++.+++.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~- 220 (283)
T d2b30a1 143 YSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNL-KQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN- 220 (283)
T ss_dssp HSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHH-HHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTT-
T ss_pred hhccccccccHHHHhhcccceEEEEecCHHHHHHHHHHH-HHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhcc-
Confidence 0000 01123333333 221222222345578899999999999999999999998
Q ss_pred cCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 794 HKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 794 ~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++.+.+++||| +.||.+||+.++.
T Consensus 221 -----i~~~~vi~~GD-~~ND~~Ml~~a~~ 244 (283)
T d2b30a1 221 -----ISNDQVLVVGD-AENDIAMLSNFKY 244 (283)
T ss_dssp -----CCGGGEEEEEC-SGGGHHHHHSCSE
T ss_pred -----cccceEEEecC-ChhhHHHHHhCCc
Confidence 56889999999 9999999998743
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.77 E-value=6.5e-19 Score=184.29 Aligned_cols=187 Identities=11% Similarity=0.101 Sum_probs=122.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC----ceEE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN----MWLA 676 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~li 676 (942)
++.|||+|+||||++.. . .++.+.++.++.+ .|..|+|+|||++..+.++++.++ .+++
T Consensus 2 ~~~li~~DlDGTL~~~~--------------~--~~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i 64 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQ--------------Q--ALEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWL 64 (244)
T ss_dssp CSEEEEECTBTTTBSCH--------------H--HHHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEE
T ss_pred CceEEEEECcccCCCCC--------------C--CHHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEE
Confidence 56799999999999752 1 1244556666665 589999999999999999887663 3689
Q ss_pred eecceEEEeCCCc---eeecccCCCChhHHHHHHHHHHHHHhcCCCeee----eeecceEEEEEeccchHHhHHHHHHHH
Q 002285 677 AENGMFLRLTTGE---WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHF----EVRETSLVWNYKYADLEFGRLQARDIL 749 (942)
Q Consensus 677 aehG~~ir~~~~~---w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i----E~K~~sl~~hyr~ad~e~~~~qa~el~ 749 (942)
++||+.+....+. |...... .|. ..++..+....++... +.....+.+++.....+.. ..++.
T Consensus 65 ~~~G~~i~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 134 (244)
T d1s2oa1 65 TAVGSEIYHPEGLDQHWADYLSE----HWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPTV---IDQLT 134 (244)
T ss_dssp ETTTTEEEETTEECHHHHHHHHT----TCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHH---HHHHH
T ss_pred eccceEEEEccCcchHHHHHHHH----HHh---HHHHHHHHhhcccccccChhhhcceEEEEeccccccHHH---HHHHH
Confidence 9999999854331 2211101 111 1223333344444333 2233455666543322211 22333
Q ss_pred HHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 750 QHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 750 ~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+ ..... .......+..++||.|++++||.|++.|++.++ ++.+.++|||| +.||++||+.++.
T Consensus 135 ~~~-~~~~~-~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~g------i~~~~~v~~GD-~~ND~~Ml~~~~~ 199 (244)
T d1s2oa1 135 EML-KETGI-PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETSAR 199 (244)
T ss_dssp HHH-HTSSC-CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSSSE
T ss_pred HHH-Hhhcc-cceeeecCCcEEEEEeCccchhHHHHHHHHhcc------CChhhEEEEcC-CCCCHHHHhhCCc
Confidence 333 32221 122345677899999999999999999999998 56788999999 9999999998864
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.76 E-value=3.7e-18 Score=176.53 Aligned_cols=182 Identities=18% Similarity=0.151 Sum_probs=124.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc--CceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--NMWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~l~liaeh 679 (942)
.|+|+||+||||++. ...++++++++|++|.+ .|..|+++|||+...+..+...+ ...++++|
T Consensus 3 iKli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~ 67 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 67 (225)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEecCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCchhhhHHHHHHcCCCceEEeec
Confidence 479999999999975 45688999999999998 59999999999999887766554 45789999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeee-eeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCC
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHF-EVRETSLVWNYKYADLEFGRLQARDILQHLWSGPIS 758 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i-E~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~ 758 (942)
|+.+...++.-.... .. +.+.+.++....+..-..+ ..+.....+.+. .+++ +...+...+ .
T Consensus 68 G~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~-~---- 130 (225)
T d1l6ra_ 68 GGIMFDNDGSIKKFF----SN---EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDPE----DVDYVRKEA-E---- 130 (225)
T ss_dssp GTEEECTTSCEEESS----CS---HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCGG----GHHHHHHHH-H----
T ss_pred ceEEEeCCccEEEec----Ch---HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCHH----HHHHHHHHH-h----
Confidence 998876544322222 11 2333444443332211111 111111112221 1122 122333333 1
Q ss_pred CCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 759 NASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 759 ~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
...+.+..+...+|+.|++++||.|+++|+++++ ++++.+++||| +.||.+||+.++
T Consensus 131 ~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~------i~~~~v~~~GD-s~nD~~m~~~a~ 187 (225)
T d1l6ra_ 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPV 187 (225)
T ss_dssp TTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSS
T ss_pred hcCcEEEECCcEEEecCCccchHHHHHHHhhhhc------cchhheeeecC-CcchHHHHHHCC
Confidence 2357788889999999999999999999999998 56889999999 999999999874
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.6e-17 Score=171.23 Aligned_cols=195 Identities=16% Similarity=0.213 Sum_probs=113.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc----CceEE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY----NMWLA 676 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~li 676 (942)
..||++||+||||++. +..++++++++|++|.+ ++.++|+|||+...+...+... ..+++
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~ 65 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVF 65 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CCEEEEEcCcCCeeCC--------------CCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEe
Confidence 4689999999999985 46789999999999975 4578999999999888777665 34566
Q ss_pred eecceEEEeCCCc-eeecccCCCChhHHHHHHHHHHHHHhcCCC-----eeeeeecceEEEEEecc--chHHh-------
Q 002285 677 AENGMFLRLTTGE-WMTTMPENLNMDWVDSVKHVFEYFTERTPR-----SHFEVRETSLVWNYKYA--DLEFG------- 741 (942)
Q Consensus 677 aehG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~r~~G-----s~iE~K~~sl~~hyr~a--d~e~~------- 741 (942)
+.+|+.+...++. +......................+...... ...+.......+..... +....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 66 PENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp SGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred cCcEEEEecCCccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhh
Confidence 6677776554432 221110000101111111111111111111 11122222222222111 11100
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC----CC
Q 002285 742 --RLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ----KD 814 (942)
Q Consensus 742 --~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~----nD 814 (942)
.....+..+.+ ........+.+ ..+..++||.|+++|||+||++|++ ++.+++++||| +. ||
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~~---------~~~~ev~afGD-~~~~g~ND 214 (243)
T d2amya1 146 KKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVEN---------DGYKTIYFFGD-KTMPGGND 214 (243)
T ss_dssp HHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTT---------SCCSEEEEEEC-SCC---CC
T ss_pred cchhhhHHHHHHH-HHHhcccceEEEecCCccceeeccccCHHHHHHHHhC---------CCcceEEEEcC-CCCCCCCc
Confidence 01112233333 22222334544 4568899999999999999998853 35789999999 76 99
Q ss_pred HHHHHhcC
Q 002285 815 EDIYTFFE 822 (942)
Q Consensus 815 EdMF~~~~ 822 (942)
++||++++
T Consensus 215 i~Ml~~~g 222 (243)
T d2amya1 215 HEIFTDPR 222 (243)
T ss_dssp CHHHHCTT
T ss_pred HHHHHccC
Confidence 99999874
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.72 E-value=1.8e-17 Score=171.73 Aligned_cols=182 Identities=16% Similarity=0.101 Sum_probs=110.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+||+|+||||++. . .+++++++|++|.+ .|..|+++|||++..+..++..++ .++|++|
T Consensus 2 iKli~~DlDGTLl~~--------------~--~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~n 64 (243)
T d1wzca1 2 IRLIFLDIDKTLIPG--------------Y--EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (243)
T ss_dssp EEEEEECCBTTTBSS--------------S--CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred cEEEEEeCCCCCCCC--------------C--CCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhcccccccccC
Confidence 389999999999964 1 24678999999998 599999999999999999999884 5799999
Q ss_pred ceEEEeCCCceee-ccc--------CCCChhHHHHHHHHHHHHHhcCCCeeeee----------------------ecce
Q 002285 680 GMFLRLTTGEWMT-TMP--------ENLNMDWVDSVKHVFEYFTERTPRSHFEV----------------------RETS 728 (942)
Q Consensus 680 G~~ir~~~~~w~~-~~~--------~~~~~~w~~~v~~il~~~~~r~~Gs~iE~----------------------K~~s 728 (942)
|+.+...++.... ... ...... ...+...+..+........... ....
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (243)
T d1wzca1 65 GSAIFIPKGYFPFDVKGKEVGNYIVIELGIR-VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYS 143 (243)
T ss_dssp TTEEEECTTCCC----------CEEEECSCC-HHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSE
T ss_pred CcEEEcCCCceecccchhHHHHHHHHHHhhh-HHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcc
Confidence 9999854332110 000 000000 1122222211110000000000 0000
Q ss_pred EEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEe
Q 002285 729 LVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIG 808 (942)
Q Consensus 729 l~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 808 (942)
........ ....+.... ..+.+..+ ..+++.|.+++||.|++.++++++. ++.+.++|||
T Consensus 144 ~~~~~~~~------~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~~-----~~~~~~~a~G 203 (243)
T d1wzca1 144 ETIFEWSR------DGWEEVLVE--------GGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYKR-----LGQIESYAVG 203 (243)
T ss_dssp EEECBCSS------SCHHHHHHH--------TTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHHT-----TSCEEEEEEE
T ss_pred hhhhhhhh------HHHHHhhhh--------cCeEEeec-ccccchhhhhccHHHHHHHHHHhcC-----CCcccEEEEc
Confidence 00000000 000111111 23444444 3478999999999999999999852 4578999999
Q ss_pred CCCCCCHHHHHhcC
Q 002285 809 HFLQKDEDIYTFFE 822 (942)
Q Consensus 809 D~d~nDEdMF~~~~ 822 (942)
| +.||.+||++++
T Consensus 204 D-~~ND~~Ml~~a~ 216 (243)
T d1wzca1 204 D-SYNDFPMFEVVD 216 (243)
T ss_dssp C-SGGGHHHHTTSS
T ss_pred C-CHhHHHHHHcCC
Confidence 9 999999999873
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=6.8e-17 Score=165.64 Aligned_cols=191 Identities=16% Similarity=0.140 Sum_probs=116.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC---ceEEee
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN---MWLAAE 678 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~---l~liae 678 (942)
..|||+|+||||++. +..++++++++|++|.+ .|+.++++|||+...+.+.+..++ .++|++
T Consensus 4 ~~li~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~ 68 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAE 68 (232)
T ss_dssp CEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEG
T ss_pred CEEEEEECCCCccCC--------------cCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEcc
Confidence 458999999999975 34678899999999987 699999999999999999988763 579999
Q ss_pred cceEEEeCCCc-ee----ecccCCCChhHHHHHHHHHHHHHhcCCCeeeee----------------------ecceEEE
Q 002285 679 NGMFLRLTTGE-WM----TTMPENLNMDWVDSVKHVFEYFTERTPRSHFEV----------------------RETSLVW 731 (942)
Q Consensus 679 hG~~ir~~~~~-w~----~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~----------------------K~~sl~~ 731 (942)
||+.+...... .. ... ......+............. ........ .......
T Consensus 69 nGa~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
T d1xvia_ 69 NGAVIQLAEQWQEIDGFPRII-SGISHGEISLVLNTLREKEH-FKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTL 146 (232)
T ss_dssp GGTEEECCTTCTTSTTTTEEE-CSSCHHHHHHHHHHHHHHHC-CCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEE
T ss_pred CCeEEEecCCccccchhhhhh-hHHHHHHHHHhhhhhhhhhc-cccccccchhhhhhhhhhcccchhhhhhhhcceeeee
Confidence 99999843221 00 000 01111111111111111100 00000000 0000000
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
... ...+ ......... . .....+..+...+++.|++++||.|++.|++.+..-+ ++.+.+++||| +
T Consensus 147 ~~~-~~~~----~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~---i~~~~~iafGD-~ 212 (232)
T d1xvia_ 147 IWR-DSDE----RMAQFTARL-N----ELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS---GKRPTTLGLGD-G 212 (232)
T ss_dssp EEC-SCHH----HHHHHHHHH-H----HTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH---SSCCEEEEEES-S
T ss_pred ccc-ccHH----HHHHHHHHh-h----hccceeeeccceeeccCCCchHHHHHHHHHHHHHHcC---CChhcEEEEcC-C
Confidence 000 0000 111111222 1 1234566677789999999999999999998642111 56789999999 9
Q ss_pred CCCHHHHHhcCc
Q 002285 812 QKDEDIYTFFEP 823 (942)
Q Consensus 812 ~nDEdMF~~~~~ 823 (942)
.||.+||++++.
T Consensus 213 ~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 213 PNDAPLLEVMDY 224 (232)
T ss_dssp GGGHHHHHTSSE
T ss_pred HhHHHHHHhCCe
Confidence 999999999976
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.68 E-value=1.8e-16 Score=156.55 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=111.2
Q ss_pred ceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEE
Q 002285 375 KVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHH 454 (942)
Q Consensus 375 ~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~ 454 (942)
.++++|||+.+.||++.+|+|++++ |+.+ + ++++.. ++++.++.+.+++.+. .. ..|+|
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~--l--~ivg~~--~~~~~~~~~~~~~~~~----~~-------~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK--L--YIVGWF--SKGDHAERYARKIMKI----AP-------DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC--E--EEEBCC--CTTSTHHHHHHHHHHH----SC-------TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe--E--EEEEec--ccccchhhhhhhhccc----cc-------CcEEE
Confidence 4578999999999999999999876 4543 4 444433 2344455555544433 11 13666
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSI 532 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI 532 (942)
+ +.++.+++..+|+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++ |+++++++|
T Consensus 72 ~-g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~----g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i 145 (166)
T d2f9fa1 72 L-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS----GKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAM 145 (166)
T ss_dssp E-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT----TCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHH
T ss_pred e-ecccccccccccccccccccccccccccccccccccc----cccceeecCCcceeeecCCcccccCCC-CHHHHHHHH
Confidence 4 7899999999999999999999999999999999999 3689999999988877 568888876 899999999
Q ss_pred HHHhCCCHHHH
Q 002285 533 GYALNMPADER 543 (942)
Q Consensus 533 ~~aL~m~~~er 543 (942)
..+++++...+
T Consensus 146 ~~l~~~~~~~~ 156 (166)
T d2f9fa1 146 KKVSKNPDKFK 156 (166)
T ss_dssp HHHHHCTTTTH
T ss_pred HHHHhCHHHHH
Confidence 99999875433
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.8e-15 Score=155.20 Aligned_cols=193 Identities=19% Similarity=0.240 Sum_probs=105.9
Q ss_pred EEEE-EecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc-c-----CceE
Q 002285 603 RLLI-LGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE-Y-----NMWL 675 (942)
Q Consensus 603 rLi~-lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~-~-----~l~l 675 (942)
|+|+ ||+||||++. +..++++++++|++|.+ .| .++++|||+...+...+.. + ..++
T Consensus 1 k~i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T d2fuea1 1 RVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYV 64 (244)
T ss_dssp CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEE
T ss_pred CEEEEEccccCccCC--------------CCcCCHHHHHHHHHHHh-CC-CEEEEecCChhhhhhhhhhhhcccccccee
Confidence 3455 5999999986 45789999999999986 45 5677777776665544433 2 3578
Q ss_pred EeecceEEEeCCCc-eeecccCCCChhHHHHH-HHHHHHHHhcCCC----eeeeeecceEEEEEeccch------HHhH-
Q 002285 676 AAENGMFLRLTTGE-WMTTMPENLNMDWVDSV-KHVFEYFTERTPR----SHFEVRETSLVWNYKYADL------EFGR- 742 (942)
Q Consensus 676 iaehG~~ir~~~~~-w~~~~~~~~~~~w~~~v-~~il~~~~~r~~G----s~iE~K~~sl~~hyr~ad~------e~~~- 742 (942)
++.+|+.+...+.. +................ ............. .+.........++...... ++..
T Consensus 65 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T d2fuea1 65 FAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 144 (244)
T ss_dssp EEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred ecccceeeccCCccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhh
Confidence 99999998754332 21111000000001111 1111111111111 1111112222222221110 0000
Q ss_pred ----HHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC----C
Q 002285 743 ----LQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ----K 813 (942)
Q Consensus 743 ----~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~----n 813 (942)
....+....+.... ....+.+ ..+..++||.|+++|||.||+.|++. +.+.+++||| +. |
T Consensus 145 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~~---------~~~ev~afGD-~~~~G~N 213 (244)
T d2fuea1 145 DKKEKIREKFVEALKTEF-AGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQD---------SFDTIHFFGN-ETSPGGN 213 (244)
T ss_dssp HHHHCHHHHHHHHHHHHT-TTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTS---------CCSEEEEEES-CCSTTST
T ss_pred ccchhhHHHHHHHHHHHh-hccceeEeeccCccceecchhccHHHHHHHHhcC---------ChhhEEEEcC-CCCCCCC
Confidence 00111112221111 2223443 45778999999999999999998752 4789999999 86 9
Q ss_pred CHHHHHhcC
Q 002285 814 DEDIYTFFE 822 (942)
Q Consensus 814 DEdMF~~~~ 822 (942)
|++||++++
T Consensus 214 D~eml~~a~ 222 (244)
T d2fuea1 214 DFEIFADPR 222 (244)
T ss_dssp THHHHHSTT
T ss_pred cHHHHHcCC
Confidence 999999985
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.73 E-value=4.8e-10 Score=111.39 Aligned_cols=42 Identities=7% Similarity=0.012 Sum_probs=34.6
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.....|+...+.+++.++ ++.+.++|||| +.||.+||++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~------i~~~eviaiGD-g~NDi~Ml~~Ag~ 166 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAFK------SLYYRVIAAGD-SYNDTTMLSEAHA 166 (206)
T ss_dssp EEECCSSSHHHHHHHHHH------HTTCEEEEEEC-SSTTHHHHHHSSE
T ss_pred cccccchhhHHHHHHHhc------ccccceEEecC-CccCHHHHHhCCc
Confidence 345567777788888887 46899999999 9999999999953
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=97.77 E-value=8.5e-06 Score=81.77 Aligned_cols=40 Identities=13% Similarity=0.087 Sum_probs=32.4
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+.|.+.+.|+.|.+ .|..++|+||-....++.++..++
T Consensus 74 ~~l~pg~~~~l~~L~~-~g~~~~ivS~~~~~~i~~~l~~l~ 113 (226)
T d2feaa1 74 AKIREGFREFVAFINE-HEIPFYVISGGMDFFVYPLLEGIV 113 (226)
T ss_dssp CCBCTTHHHHHHHHHH-HTCCEEEEEEEEHHHHHHHHTTTS
T ss_pred cchhHHHHHHHHHHHh-cccccccCCcchhhhHHHHHHHcC
Confidence 4577888899999876 588999999988888888877653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=97.62 E-value=1.3e-05 Score=82.67 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=43.2
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcccCce
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGEYNMW 674 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~l~ 674 (942)
+.++|+||+||||.+. .. +-+.+.++|++|.+ .+.+++++| +|+...+.+.+..+++.
T Consensus 6 ~ik~vlFDlDGTL~~~--------------~~-~i~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 6 KIELFILDMDGTFYLD--------------DS-LLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp GCCEEEECCBTTTEET--------------TE-ECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred hCCEEEEeCCCeeEEC--------------Cc-cCchHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 4578999999999875 11 23677899999987 689999997 56677766666555443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.57 E-value=4.8e-05 Score=71.24 Aligned_cols=60 Identities=17% Similarity=0.068 Sum_probs=44.5
Q ss_pred cccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 598 LQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 598 ~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
..++.+.|+||+||||++..... .-+...-....+-|.++++|+.|.+ .|..|+++|||+
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~--~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~ 62 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRG--PYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRE 62 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCC--TTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCC--cCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCc
Confidence 45788999999999999764321 0010111245678999999999997 699999999996
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.49 E-value=0.00014 Score=74.39 Aligned_cols=51 Identities=10% Similarity=0.201 Sum_probs=38.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhh
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNF 668 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~ 668 (942)
.++++||+||||.+. ...+ +.+.++|++|.+ .|.+++++|+ |+...+.+.+
T Consensus 2 yk~v~fDlDGTL~~~--------------~~~i-~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLG--------------KEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEeC--------------CCcC-ccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHH
Confidence 478999999999875 2223 778999999987 5899999975 5566655544
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=5.8e-05 Score=77.33 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=43.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcccC
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGEYN 672 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~~~ 672 (942)
+.|+|+||+||||.+. ...+ +.+.++|++|.+ .|.+|+++| +|+...+.+.+..++
T Consensus 2 ~ik~VifDlDGTL~~~--------------~~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~~G 60 (250)
T d2c4na1 2 TIKNVICDIDGVLMHD--------------NVAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFATAG 60 (250)
T ss_dssp CCCEEEEECBTTTEET--------------TEEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHHTT
T ss_pred CCCEEEEECCCeeEEC--------------CCcC-ccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHhhcc
Confidence 3589999999999875 1223 467899999987 589999986 788888887776554
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00012 Score=73.38 Aligned_cols=41 Identities=27% Similarity=0.521 Sum_probs=33.9
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
..+.|.+.++|+.|.+ .|.+++||||-....++.++..+++
T Consensus 81 ~~l~pg~~~~i~~lk~-~G~~~~ivS~~~~~~v~~i~~~lgi 121 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASKLNI 121 (217)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHh-CCCEEEEECCCchHHHHHHHHHhCC
Confidence 4577899999999987 5899999999888888888777654
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.00 E-value=0.00043 Score=63.30 Aligned_cols=48 Identities=19% Similarity=0.188 Sum_probs=39.4
Q ss_pred EEEEEecCCccCCCCC-ccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 603 RLLILGFNATLTAPVD-FLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~-~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
+-|++|+||||+...+ ++ ..+.|-+.+++.|..|.+ .|+.++|.|+|.
T Consensus 2 K~i~~DiDGTI~~~~~~~y---------~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDY---------RNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCG---------GGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCc---------CccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 3589999999987532 12 356788999999999987 699999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.90 E-value=0.00051 Score=62.67 Aligned_cols=60 Identities=17% Similarity=0.171 Sum_probs=45.1
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH---HhhcccCce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD---DNFGEYNMW 674 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~---~~~~~~~l~ 674 (942)
-|++|+||||+.. +.+ ....|-+.+++.|++|.+ .|+.|+|.|+|+-...+ +|+...++.
T Consensus 2 ti~vDiDGTl~~~-~~~---------~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 2 TIAVDFDGTIVEH-RYP---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp EEEECCBTTTBCS-CTT---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred EEEEEcCCCcCCC-CCC---------ccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 3799999999875 233 245677899999999997 59999999999876544 455544443
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.67 E-value=0.11 Score=60.73 Aligned_cols=141 Identities=11% Similarity=0.086 Sum_probs=99.9
Q ss_pred CCceEEEeecccccCCHHHHHHH----HHHhHHhCCCC-CCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCc
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILA----FEKFLEENPSW-RDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTL 447 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~A----f~~ll~~~P~~-~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~ 447 (942)
+..+++++-|+..-|-....+.- +.++.+ .|+. ...+++|.-|....++... +++-+.|.+++..||..-...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~-~~~~~~~P~q~IFaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNKFVVPRTVMIGGKAAPGYHMA-KMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTSCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHTTCTTTG
T ss_pred chhhhhheeechhhhhhhhhHhhHHHHHHHhhh-cccCCCCCeEEEEeCCCCCccHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 56778899999999998874443 355544 3332 1246777666555566543 456667777777777543333
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEE
Q 002285 448 TTVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILV 520 (942)
Q Consensus 448 ~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllV 520 (942)
+...|+|+. ..+-.--..++.+|||.+.+|++ |.-|..-+=||.- |++.+|..-|+--++ +.+|+++
T Consensus 627 ~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cceeEEEcC-CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc-----CCeeeccccchHHHHHHhcCcccEEEe
Confidence 444688764 56677778899999999999995 9999999998875 999999999986554 4678887
Q ss_pred C
Q 002285 521 N 521 (942)
Q Consensus 521 n 521 (942)
-
T Consensus 701 G 701 (824)
T d2gj4a1 701 G 701 (824)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.66 E-value=0.0028 Score=64.34 Aligned_cols=52 Identities=10% Similarity=0.223 Sum_probs=39.9
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhhc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNFG 669 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~~ 669 (942)
.+.|+||+||||.+. . .+-|.+.++|++|.+ .|..++++|+ |+...+.+.+.
T Consensus 2 yk~vlFDlDGTL~~~--------------~-~~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKG--------------K-DRIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEET--------------T-EECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEEC--------------C-CcCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 478999999999865 1 134778999999887 5899999975 56667766664
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.06 Score=62.80 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=100.6
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHh---HHhCCCC-CCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKF---LEENPSW-RDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~l---l~~~P~~-~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++++-|+..-|-....+.-..++ +...|+. +..+++|..|.+..+|.+. +++-+.|.+++..+|..-...+
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHHTCTTTGG
T ss_pred hhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHH-HHHHHHHHHHHHHhcCChhhcc
Confidence 566888999999999988866655544 3344432 1236777666555566443 4566677777777765322222
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVn 521 (942)
...|+|+. ..+-+--..+...|||-+.+|++ |.-|..-+=|+.- |++.+|..-|.--++ +.+|+++-
T Consensus 604 ~~kVVFle-nYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceeEEEeC-CCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc-----CCeeeecccchHHHHHHhcCccceEEec
Confidence 33577764 56677777889999999999985 9999999999885 999999999986554 47888884
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=96.31 E-value=0.0043 Score=60.03 Aligned_cols=44 Identities=11% Similarity=0.010 Sum_probs=38.7
Q ss_pred EEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 773 VRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 773 V~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.....+|..+++.++++++ ++++.|+|||| |.||.+||+.++.
T Consensus 74 ~~~~~~~K~~~l~~~~~~~~------i~~~~v~~vGD-d~nDl~~l~~~g~ 117 (177)
T d1k1ea_ 74 FFLGKLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGT 117 (177)
T ss_dssp EEESCSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred cccccccHHHHHHHHHHHhc------CCcceeEEecC-CccHHHHHhhCCe
Confidence 33456799999999999998 67899999999 9999999999975
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.0023 Score=60.98 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=38.9
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
+|+||||.||||....... ...... +...+-|.+.++|++|.+ .|..++|+|..
T Consensus 2 ~K~i~~D~DGtL~~~~~~~-~~~~~~--~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq 55 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSD-FQVDRF--DKLAFEPGVIPQLLKLQK-AGYKLVMITNQ 55 (161)
T ss_dssp CEEEEECCBTTTBCCC--C-CCCCSG--GGCCBCTTHHHHHHHHHH-TTEEEEEEEEC
T ss_pred CcEEEEeCCCCeEeeCCCC-CccCCH--HHceECccHHHHHHHHHH-cCCceeeeccc
Confidence 6899999999999753211 001111 345678899999999998 69999999875
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.99 E-value=0.0034 Score=59.53 Aligned_cols=61 Identities=21% Similarity=0.164 Sum_probs=40.6
Q ss_pred CEEEEEecCCccCCCCCccCCC-------CCcc---ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh
Q 002285 602 NRLLILGFNATLTAPVDFLGRR-------GGQI---REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV 663 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~-------~~~~---~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~ 663 (942)
.|+|+||+||||.+...+-... ...+ ......+-|.+.++|+.|.+ .|..++|+|+.+...
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS-LGVPVAAASRTSEIQ 75 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHH-TTCCEEEEECCSCHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHH-CCCcEEEEeccccch
Confidence 4789999999998642111000 0000 11234577899999999998 599999999765543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.43 E-value=0.0024 Score=61.55 Aligned_cols=43 Identities=12% Similarity=0.112 Sum_probs=37.3
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
...+..|+.++..+++.++ ++++.+++||| +.||.+||++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~------~~~~~~i~iGD-s~nDi~m~~~ag~ 179 (210)
T d1j97a_ 137 VLKENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGL 179 (210)
T ss_dssp SCSTTHHHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHHHCSE
T ss_pred ccccccccchhhhHHHHhc------ccccceEEecC-CcChHHHHHHCCC
Confidence 3456789999999999987 56889999999 9999999999864
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.03 E-value=0.0091 Score=57.48 Aligned_cols=53 Identities=9% Similarity=0.129 Sum_probs=40.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
.++||||.||||....... .+ .++.++-|.+.++|++|.+ .|..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~----~~--~~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred CCEEEEeCCCCccCCCCCC----CC--HHHeeECCCHHHHHHHHhh-cCchhhhhhccch
Confidence 3689999999998643211 11 1456788999999999998 6999999999763
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=94.83 E-value=0.18 Score=52.46 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=62.3
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc--------cccc--CCceEEECCCC
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA--------AQSL--GAGAILVNPWN 524 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~--------~~~l--g~~gllVnP~D 524 (942)
+.+++++.+ ++..+|+||..+ |. .++.|||+| +.|+|+.-+.+- ++.+ ...|+.+++.+
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~-~t~~Eal~~----G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~ 342 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SA-GTTLLAMRA----GIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CH-HHHHHHHHH----TCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSS
T ss_pred EecccCHHH---HHhhccEEEecC---ch-HHHHHHHHh----CCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCC
Confidence 356777654 567899999764 44 478999999 346777665542 2223 13578887654
Q ss_pred --HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 525 --ITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 525 --~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
.++++++|.++|+.+-. ++.+++.+.++.....+=++.+.+.|
T Consensus 343 ~~~~~l~~~i~~~l~~~~r---~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 343 PTIDSLSAALDTALAPEIR---ARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp CCHHHHHHHHHHHTSTTHH---HHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 89999999999964322 33333434444433444444443333
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.69 E-value=0.0065 Score=60.25 Aligned_cols=56 Identities=18% Similarity=0.254 Sum_probs=41.6
Q ss_pred cccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 598 LQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 598 ~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
...+.++||||.||||....+.+. . ..+.++-|.+.++|++|.+ .|..++|+|-.+
T Consensus 19 ~p~~~~Aif~DrDGtl~~~~~y~~----~--~~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 19 FPPHLPALFLDRDGTINVDTDYPS----D--PAEIVLRPQMLPAIATANR-AGIPVVVVTNQS 74 (209)
T ss_dssp CCSSCCCEEECSBTTTBCCCSCTT----C--GGGCCBCGGGHHHHHHHHH-HTCCEEEEEECH
T ss_pred CCCCCCEEEEeCCCCeECCCCCCC----C--HHHeEecccHHHHHHHHHh-hCCeEEEecccc
Confidence 334557899999999987543221 0 1345688999999999997 699999999753
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=94.38 E-value=0.014 Score=56.73 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=33.9
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+-|.+.+.|..|.+ .|..++|+||.+...++..+..++
T Consensus 94 ~~l~~~~~~~L~~L~~-~g~~~~i~tn~~~~~~~~~l~~~g 133 (224)
T d2hsza1 94 SRLYPNVKETLEALKA-QGYILAVVTNKPTKHVQPILTAFG 133 (224)
T ss_dssp CEECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHhc-cCCcccccccccHHHHHHHHHhcC
Confidence 3467889999999997 599999999999999888877654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=94.30 E-value=0.013 Score=57.62 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+-|.+.+.|+.|++.++..++|+||.+...+...+..++
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~g 130 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPG 130 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTT
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhc
Confidence 3457889999999875457899999999998888877654
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=93.63 E-value=5 Score=41.87 Aligned_cols=237 Identities=16% Similarity=0.138 Sum_probs=135.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.+|+|.||.=-.-.++..+.....++||++.. .-..+.++....| ++..|.+. .+|+.--.+..+.++.++
T Consensus 88 kPD~vlv~GDr~e~la~a~aa~~~~ipi~Hie-gG~rsg~~~~~~~--de~~R~~iskls~~hf~~t~~~~~~L~~---- 160 (373)
T d1v4va_ 88 GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE-AGLRSGNLKEPFP--EEANRRLTDVLTDLDFAPTPLAKANLLK---- 160 (373)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET-CCCCCSCTTSSTT--HHHHHHHHHHHCSEEEESSHHHHHHHHT----
T ss_pred CcccccccccCccchhHHHHHHHhhhhheeec-ccccccccccCcc--hhhhhhhhccccceeeecchhhhhhhhh----
Confidence 56999999766667776666666789998653 2222333333333 44444332 256655556665555442
Q ss_pred HhccccCCCceecCCeeeEEEEee-CccCccccchhcCChhhHHHHHHHHH----HhcCCceEEEeecccccCCHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFP-IGIDSDRFVRALELPQVQDHINELKE----RFAGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP-~GID~~~f~~~~~~~~~~~~~~~lr~----~~~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
+|. ...+|.++. .++|. +.. ...+.+ ...++.+++..-|-...+.....+.
T Consensus 161 -~Ge-----------~~~~I~~vG~p~~D~--i~~----------~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~ 216 (373)
T d1v4va_ 161 -EGK-----------REEGILVTGQTGVDA--VLL----------AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQ 216 (373)
T ss_dssp -TTC-----------CGGGEEECCCHHHHH--HHH----------HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHH
T ss_pred -hcc-----------cccceeecccchhhH--HHh----------hhhhcccccccccccceeEEeccccccchHHHHHH
Confidence 121 122333322 12332 110 000100 0134567778888888888899999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
++..+.+..+++. ++... + .. +. .+..+.+.... . ..+.+ ...+++.++..+++.|+++
T Consensus 217 ~~~~~~~~~~~~~----~i~p~-~--~~-~~---~~~~~~~~~~~----~-----~n~~~-~~~l~~~~~l~ll~~s~~v 275 (373)
T d1v4va_ 217 ALKRVAEAFPHLT----FVYPV-H--LN-PV---VREAVFPVLKG----V-----RNFVL-LDPLEYGSMAALMRASLLL 275 (373)
T ss_dssp HHHHHHHHCTTSE----EEEEC-C--SC-HH---HHHHHHHHHTT----C-----TTEEE-ECCCCHHHHHHHHHTEEEE
T ss_pred HHHHHhhhcccce----eeeee-c--cc-cc---chhhhhhhhcc----c-----cccee-eccchHHHHHHHhhhceeE
Confidence 9999988887643 33221 1 11 21 12222222111 1 13554 4678999999999999998
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc-cCCceEEECCCCHHHHHHHHHHHhCCC
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS-LGAGAILVNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~-lg~~gllVnP~D~~~lA~aI~~aL~m~ 539 (942)
+=.| +-...||.+. +-|+|.-...|-.+. +..+..++-+.|.+++.++|..+|..+
T Consensus 276 ignS-----ssgi~Ea~~l----g~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 276 VTDS-----GGLQEEGAAL----GVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp EESC-----HHHHHHHHHT----TCCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred eccc-----chhhhcchhh----cCcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcCH
Confidence 8777 4677899998 245665555555543 212223334569999999999999753
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.42 E-value=0.021 Score=55.80 Aligned_cols=57 Identities=12% Similarity=0.212 Sum_probs=38.7
Q ss_pred cccCCEEEEEecCCccCCCCC-ccCCCCCccccCCC-CCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 598 LQSNNRLLILGFNATLTAPVD-FLGRRGGQIREMEP-KLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 598 ~~s~~rLi~lD~DGTL~~~~~-~P~~~~~~~~~~~~-~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
.+.+.|+++||.||||..... .+ .. .-+ .+- .+.|.+.++|+.|.+ .|..++|+|--
T Consensus 17 ~~~~~Kia~fDrDGtLik~~~~~~--~~-~~~-~d~~~l~~~v~~~i~~L~~-~gy~iiIvTNQ 75 (195)
T d1yj5a1 17 VKPQGKVAAFDLDGTLITTRSGKV--FP-TSP-SDWRILYPEIPKKLQELAA-EGYKLVIFTNQ 75 (195)
T ss_dssp CCCCSCEEEECSBTTTEECSSSCS--SC-SST-TCCEESCTTHHHHHHHHHH-HTCEEEEEEEC
T ss_pred CCCcCcEEEEECCCceEeeCCCCc--CC-CCh-hhceeccCCHHHHHHHHHh-CCcEEEEecCc
Confidence 345678899999999975321 00 00 000 122 257999999999997 59999999975
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=91.63 E-value=0.053 Score=52.21 Aligned_cols=38 Identities=18% Similarity=0.363 Sum_probs=31.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+-|.+.+.|+.|.+ +..++|+|+.....++..+..++
T Consensus 82 ~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~~ 119 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSYP 119 (207)
T ss_dssp EECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTSG
T ss_pred ccccchhhhhhhhcc--ccccccccccccccccccccccc
Confidence 466789999999964 68999999999999988887754
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=89.97 E-value=0.12 Score=49.36 Aligned_cols=69 Identities=23% Similarity=0.273 Sum_probs=46.0
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+-|+|+||+||+|++-.-.-...+. .-......--.+|+.|.. .+..++++||+....+......+++
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~~~dG~----e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHYDANGE----AIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGI 71 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEE----EEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred ccCeEEEEccCCcccCCeEEEeCCCC----EEEEEECcchHHHHHHhh-hcEEEEEecCCchhHHHHHHhhhcc
Confidence 35689999999999974100000000 112233344457888876 6999999999999999888877654
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.11 E-value=0.28 Score=47.31 Aligned_cols=37 Identities=14% Similarity=0.200 Sum_probs=30.3
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
+-|.+.+.|.+|.+ .|.+++|+|+.+.......+...
T Consensus 128 ~~pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 128 FFADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp CCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHTB
T ss_pred cCCCHHHHHHHHhh-ccCceeecCCCcHHHHHHHHHHc
Confidence 45788999999987 69999999999988877666554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=89.05 E-value=0.042 Score=52.74 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=26.9
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
.+-|.+.++|+.|.+ .|..++|+|+++.. +...+..+
T Consensus 82 ~~~pgv~~~L~~L~~-~g~~~~v~Sn~~~~-~~~~l~~~ 118 (204)
T d2go7a1 82 VLMPGAREVLAWADE-SGIQQFIYTHKGNN-AFTILKDL 118 (204)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCTH-HHHHHHHH
T ss_pred cccchHHhhhhcccc-cccchhhhcccchh-hhhhhhhc
Confidence 456888999999887 58999999987754 33445443
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=88.60 E-value=0.19 Score=47.43 Aligned_cols=39 Identities=15% Similarity=0.257 Sum_probs=30.1
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+-|.+.+.|++|.+ .|..++|+|+.+...++ .+..++
T Consensus 78 ~~~~~gv~~~l~~l~~-~g~~~~i~Sn~~~~~~~-~l~~~~ 116 (187)
T d2fi1a1 78 PILFEGVSDLLEDISN-QGGRHFLVSHRNDQVLE-ILEKTS 116 (187)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEECSSCTHHHH-HHHHTT
T ss_pred CcccchhHHHHHHHHh-hhccccccccCccchhh-hhhhhc
Confidence 3456889999999998 59999999998776554 565543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.42 E-value=0.35 Score=43.89 Aligned_cols=57 Identities=19% Similarity=0.159 Sum_probs=46.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
..+++|.+||++--..+ .+-+++.++|+.|.+ .|..|+|+||.........-..+++
T Consensus 4 ~~~~~d~~~~~~~g~~D-------------~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 4 TAVIFDKTGTLTKGKPD-------------TLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CEEEEECCCCCBCSCCC-------------CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEECCceEEEEecCC-------------CCCccHHHHHHHHHH-cCCEEEEEcCcchhhhhHHHhhhhh
Confidence 46899999999854332 366789999999987 6999999999999999887777654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.29 E-value=0.23 Score=48.62 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=29.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.|.+.++|++|.+ ++.++|+|+-+...+...+...+
T Consensus 109 ~~~~~~~~~L~~L~~--~~~l~i~Tn~~~~~~~~~l~~~g 146 (247)
T d2gfha1 109 ILADDVKAMLTELRK--EVRLLLLTNGDRQTQREKIEACA 146 (247)
T ss_dssp CCCHHHHHHHHHHHT--TSEEEEEECSCHHHHHHHHHHHT
T ss_pred ccCccHHHHHHHhhc--ccceEEeecccchhhhhhhhhcc
Confidence 566888999999974 78999999988877776666543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=87.97 E-value=0.22 Score=49.31 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=28.4
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
.+-|.+.++|+.|.+ .|..++|+||.+...++..+..+
T Consensus 99 ~~~~g~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~~~ 136 (257)
T d1swva_ 99 SPINGVKEVIASLRE-RGIKIGSTTGYTREMMDIVAKEA 136 (257)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHh-cccceeecCCCchhhHHHHHHHH
Confidence 466778888888877 47888888888887777666654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.76 E-value=0.082 Score=50.08 Aligned_cols=16 Identities=25% Similarity=0.659 Sum_probs=14.3
Q ss_pred CCEEEEEecCCccCCC
Q 002285 601 NNRLLILGFNATLTAP 616 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~ 616 (942)
++|+++||+||||++.
T Consensus 3 kkKlv~FDlDGTL~d~ 18 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNN 18 (210)
T ss_dssp CCCEEEECCCCCCBSS
T ss_pred CCeEEEEeCCCCcCCc
Confidence 5799999999999975
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=85.41 E-value=0.21 Score=48.78 Aligned_cols=71 Identities=4% Similarity=-0.055 Sum_probs=49.4
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCc---------cCCCCCcc------------ccCCCCCChhHHHHHHHhhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDF---------LGRRGGQI------------REMEPKLHPDLKEPLKRLCD 647 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~---------P~~~~~~~------------~~~~~~~~~~~~~aL~~L~~ 647 (942)
.+.++.+.+...+...|+||+|=|+++..+. |.. .+.+ -+..+.+-|.+++.|+.+.+
T Consensus 22 ~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~-~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~ 100 (209)
T d2b82a1 22 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPES-EDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR 100 (209)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTS-SGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred EHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCc-ccccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence 3556677777767779999999999986321 100 0000 01234566789999999987
Q ss_pred CCCCeEEEEcCCCh
Q 002285 648 DPMTTVVVLSGSDR 661 (942)
Q Consensus 648 d~g~~V~IvSGR~~ 661 (942)
.|..|+.||||+.
T Consensus 101 -~Gv~IfyVTnR~~ 113 (209)
T d2b82a1 101 -RGDAIFFVTGRSP 113 (209)
T ss_dssp -HTCEEEEEECSCC
T ss_pred -cCCeEEEEeCCch
Confidence 6999999999974
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=84.30 E-value=1.2 Score=45.57 Aligned_cols=72 Identities=10% Similarity=0.023 Sum_probs=50.1
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC--CHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW--NIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~--D~~ 526 (942)
+.+.+++. ++|..+|+||. -|-..++.|++++ +-|+|+.-+.+ .+..+ ...|+.+++. +.+
T Consensus 289 ~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~----GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~ 357 (401)
T d1iira_ 289 AIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARA----GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFD 357 (401)
T ss_dssp ECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred EEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHh----CCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence 45677765 45778999983 4666788899999 24566654443 22222 1357888765 689
Q ss_pred HHHHHHHHHhC
Q 002285 527 EVASSIGYALN 537 (942)
Q Consensus 527 ~lA~aI~~aL~ 537 (942)
+++++|.++|+
T Consensus 358 ~l~~ai~~~l~ 368 (401)
T d1iira_ 358 SLSAALATALT 368 (401)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhC
Confidence 99999999995
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=82.29 E-value=0.9 Score=42.57 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=44.7
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
++++|-+|||+-..-|| +-+++.++|+.|.+ .|..|+++||=........-..++
T Consensus 4 ~~~~d~~~~~~~~~~Dp-------------~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~G 58 (168)
T d1wpga2 4 VICSDKTGTLTTNQLDP-------------PRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIG 58 (168)
T ss_dssp EEEECCTTTTBCCCECC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred EEEECCccEEEEEecCC-------------CchhHHHHHHHHHH-CcCEEEEECCCCHHHHHHHHHHcC
Confidence 67889999998653344 45788999999987 699999999999998887776654
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.24 E-value=0.63 Score=44.24 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=23.9
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
..|-+.++++|++|++..+..|.|+|.|+.
T Consensus 73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~ 102 (195)
T d1q92a_ 73 LEPLPGAVEAVKEMASLQNTDVFICTSPIK 102 (195)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred CCcccCHHHHHHHHhhccCccceEEccccc
Confidence 356688999999999755567889999864
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=80.61 E-value=1 Score=46.39 Aligned_cols=97 Identities=10% Similarity=-0.014 Sum_probs=60.8
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC----ccccc--CCceEEECCC--CHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG----AAQSL--GAGAILVNPW--NIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G----~~~~l--g~~gllVnP~--D~~ 526 (942)
+.+.+++.+ ++..+|+||. .|-..++.||+++ +-|+|+.-+.+ .+..+ ...|+.+++. +.+
T Consensus 290 ~~~~~p~~~---ll~~~~~~I~----hgG~~t~~Eal~~----GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~ 358 (401)
T d1rrva_ 290 AIDEVNFQA---LFRRVAAVIH----HGSAGTEHVATRA----GVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFE 358 (401)
T ss_dssp EESSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHH----TCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHH
T ss_pred EEeccCcHH---HhhhccEEEe----cCCchHHHHHHHh----CCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence 456787655 4567999985 5556678999999 24566655554 22223 1358888875 589
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHH
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAAT 565 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 565 (942)
.++++|.++|+ ++ -+++.++..+.+.......=++.
T Consensus 359 ~L~~ai~~vl~--~~-~r~~a~~~~~~~~~~g~~~aa~~ 394 (401)
T d1rrva_ 359 SLSAALTTVLA--PE-TRARAEAVAGMVLTDGAAAAADL 394 (401)
T ss_dssp HHHHHHHHHTS--HH-HHHHHHHHTTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhC--HH-HHHHHHHHHHHHhhcCHHHHHHH
Confidence 99999999985 33 33444444444444444443333
|